Citrus Sinensis ID: 002647
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 897 | 2.2.26 [Sep-21-2011] | |||||||
| Q8RWW0 | 744 | Receptor-like serine/thre | no | no | 0.680 | 0.819 | 0.497 | 1e-166 | |
| Q9SX31 | 708 | Proline-rich receptor-lik | no | no | 0.405 | 0.514 | 0.485 | 7e-90 | |
| Q9C660 | 762 | Proline-rich receptor-lik | no | no | 0.322 | 0.379 | 0.528 | 1e-83 | |
| Q9FFW5 | 681 | Proline-rich receptor-lik | no | no | 0.328 | 0.433 | 0.504 | 2e-83 | |
| Q9FE20 | 456 | Serine/threonine-protein | no | no | 0.335 | 0.660 | 0.518 | 4e-83 | |
| Q9SGY7 | 718 | Putative proline-rich rec | no | no | 0.319 | 0.399 | 0.530 | 7e-83 | |
| Q9CAL8 | 710 | Proline-rich receptor-lik | no | no | 0.413 | 0.522 | 0.421 | 7e-82 | |
| Q9LFP7 | 493 | Probable receptor-like pr | no | no | 0.353 | 0.643 | 0.480 | 6e-81 | |
| Q9LV48 | 652 | Proline-rich receptor-lik | no | no | 0.317 | 0.437 | 0.505 | 1e-80 | |
| Q9ZUE0 | 720 | Proline-rich receptor-lik | no | no | 0.321 | 0.4 | 0.515 | 2e-80 |
| >sp|Q8RWW0|ALE2_ARATH Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana GN=ALE2 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 587 bits (1513), Expect = e-166, Method: Compositional matrix adjust.
Identities = 338/680 (49%), Positives = 435/680 (63%), Gaps = 70/680 (10%)
Query: 234 PPNEDCGSVTCTEPLTYTPPGSPCGCVWPIQVKLALDVPIYTFFPLVSQLTEEIAASVGL 293
P + DC TC EPLT TP GSPCGCV+P++V+L L V ++ FP+ ++L E+AA L
Sbjct: 93 PSSHDCQQ-TCVEPLTSTPFGSPCGCVFPMKVQLLLSVAPFSIFPVTNELEIEVAAGTYL 151
Query: 294 NHSQVRVMGANAASQQLQKSTALINLVPLGVQFDDTVAFLIFKKFWQRQVFIKPSLFGAY 353
SQV++MGA+A S+ K+ INLVPLG +FD+T A LI+++F ++V + ++FG Y
Sbjct: 152 EQSQVKIMGASADSENQGKTVVDINLVPLGEKFDNTTATLIYQRFRHKKVPLNETVFGDY 211
Query: 354 EVLYVHYPGLPPSPPSQSSISTEDDGPYAGRDNKRQALKPLGVEVPMR------KKGGLR 407
EV ++ YPG+P S P +G G P G+ +P+ K G+
Sbjct: 212 EVTHISYPGIPSSSP---------NGDVTGD-------APGGLPIPINATTFANKSQGIG 255
Query: 408 GSMIAAIVLSSFTALVLCFGIAVFLLKRGAFRQPEQTPHDV--ICAPA--KLSGA---TT 460
IA I LS F +++ G ++K +++ ++ + V AP+ K GA +
Sbjct: 256 FRTIAIIALSGFVLILVLVGAISIIVK---WKKIGKSSNAVGPALAPSINKRPGAGSMFS 312
Query: 461 TLRYGSMLSSSSVSIDSCAVTYTGTAKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGIL 520
+ S S S+ +CA++ KTFTL+++EKAT+ F R++GEGGFG VY+G +
Sbjct: 313 SSARSSGSDSLMSSMATCALS----VKTFTLSELEKATDRFSAKRVLGEGGFGRVYQGSM 368
Query: 521 DDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNG 580
+DG EVAVK+L R NQ+ REF+AE+EMLSRLHHRNLVKL G+CIE RCL+YEL+HNG
Sbjct: 369 EDGTEVAVKLLTRDNQNRDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLIYELVHNG 428
Query: 581 SLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFT 640
S+ESHLH G LDWDAR+KIALGAARGLAYLHEDS+PRVIHRDFK+SN+LLE DFT
Sbjct: 429 SVESHLH-----EGTLDWDARLKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFT 483
Query: 641 PKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTG 700
PKVSDFGLAR A EG++HIST VMGTFGY+APEYAMTGHLLVKSDVYSYGVVLLELLTG
Sbjct: 484 PKVSDFGLAREA-TEGSQHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTG 542
Query: 701 RKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPE 760
R+PVD+SQP G+ENLV WARPLL +EGL+ ++DP + ++D + KVAAIASMCV E
Sbjct: 543 RRPVDMSQPSGEENLVTWARPLLANREGLEQLVDPALAGTYNFDDMAKVAAIASMCVHQE 602
Query: 761 VSHRPFMGEVVQALKLVCNEFDET---------KETIESRDLSEDCSISVDSKVNRLSGE 811
VSHRPFMGEVVQALKL+ N+ DET +S D D + S DS L+
Sbjct: 603 VSHRPFMGEVVQALKLIYNDADETCGDYCSQKDSSVPDSADFKGDLAPS-DSSWWNLTPR 661
Query: 812 FVEALEVCHTRSGYGVGHDNSMAI---SASEMITPMGLEGQESGSFRRHSSSGPLR-SEG 867
Y G M SAS + G + SGPLR
Sbjct: 662 LRYGQASSFITMDYSSGPLEDMENRPHSASSI--------PRVGGLILPNRSGPLRPMRS 713
Query: 868 RRQFWQILKSSSRGSMREHG 887
RR F+++ RGSM EHG
Sbjct: 714 RRNFFRL-----RGSMSEHG 728
|
Required during the differentiation of the protoderm into shoots epidermis and cuticle. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q9SX31|PERK9_ARATH Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 332 bits (852), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 185/381 (48%), Positives = 241/381 (63%), Gaps = 17/381 (4%)
Query: 412 AAIVLSSFTALVL--CFGIAVFLLKRGAFRQPEQTPHDVICAPAKLSGATTTLRYGSMLS 469
A + +S ALV+ FGI V+ L++ R + DV +P S A + + M S
Sbjct: 280 AVVGISVAVALVVFTLFGIFVWCLRKREKRLSAVSGGDVTPSPMS-STARSDSAFFRMQS 338
Query: 470 SSSVSIDSCAVTYT------GTAKT-FTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDD 522
S+ V + +Y G +K F+ ++ KATNGF ++GEGGFG VY+GIL D
Sbjct: 339 SAPVGASKRSGSYQSQSGGLGNSKALFSYEELVKATNGFSQENLLGEGGFGCVYKGILPD 398
Query: 523 GREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSL 582
GR VAVK LK G REF AE+E LSR+HHR+LV + G CI + R L+Y+ + N L
Sbjct: 399 GRVVAVKQLKIGGGQGDREFKAEVETLSRIHHRHLVSIVGHCISGDRRLLIYDYVSNNDL 458
Query: 583 ESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPK 642
HLHG+ V LDW R+KIA GAARGLAYLHED PR+IHRD KSSNILLE +F +
Sbjct: 459 YFHLHGEKSV---LDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLEDNFDAR 515
Query: 643 VSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRK 702
VSDFGLAR ALD N HI+T V+GTFGY+APEYA +G L KSDV+S+GVVLLEL+TGRK
Sbjct: 516 VSDFGLARLALD-CNTHITTRVIGTFGYMAPEYASSGKLTEKSDVFSFGVVLLELITGRK 574
Query: 703 PVDLSQPPGQENLVAWARPLLT---TKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQP 759
PVD SQP G E+LV WARPL++ E ++ DP + N + ++ A CV+
Sbjct: 575 PVDTSQPLGDESLVEWARPLISHAIETEEFDSLADPKLGGNYVESEMFRMIEAAGACVRH 634
Query: 760 EVSHRPFMGEVVQALKLVCNE 780
+ RP MG++V+A + + E
Sbjct: 635 LATKRPRMGQIVRAFESLAAE 655
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9C660|PEK10_ARATH Proline-rich receptor-like protein kinase PERK10 OS=Arabidopsis thaliana GN=PERK10 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 311 bits (797), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 156/295 (52%), Positives = 199/295 (67%), Gaps = 6/295 (2%)
Query: 489 FTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEM 548
F+ ++ ATNGF ++GEGGFG VY+G+L D R VAVK LK G REF AE++
Sbjct: 418 FSYEELVIATNGFSDENLLGEGGFGRVYKGVLPDERVVAVKQLKIGGGQGDREFKAEVDT 477
Query: 549 LSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGA 608
+SR+HHRNL+ + G CI +N R L+Y+ + N +L HLH LDW R+KIA GA
Sbjct: 478 ISRVHHRNLLSMVGYCISENRRLLIYDYVPNNNLYFHLHAAGTPG--LDWATRVKIAAGA 535
Query: 609 ARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTF 668
ARGLAYLHED PR+IHRD KSSNILLE++F VSDFGLA+ ALD N HI+T VMGTF
Sbjct: 536 ARGLAYLHEDCHPRIIHRDIKSSNILLENNFHALVSDFGLAKLALD-CNTHITTRVMGTF 594
Query: 669 GYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLL---TT 725
GY+APEYA +G L KSDV+S+GVVLLEL+TGRKPVD SQP G E+LV WARPLL T
Sbjct: 595 GYMAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDASQPLGDESLVEWARPLLSNATE 654
Query: 726 KEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNE 780
E + DP + N + ++ A+ C++ + RP M ++V+A + E
Sbjct: 655 TEEFTALADPKLGRNYVGVEMFRMIEAAAACIRHSATKRPRMSQIVRAFDSLAEE 709
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9FFW5|PERK8_ARATH Proline-rich receptor-like protein kinase PERK8 OS=Arabidopsis thaliana GN=PERK8 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 311 bits (796), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 152/301 (50%), Positives = 205/301 (68%), Gaps = 6/301 (1%)
Query: 489 FTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEM 548
F+ +++ + T+GF ++GEGGFG VY+G+L DGREVAVK LK G REF AE+E+
Sbjct: 327 FSYDELSQVTSGFSEKNLLGEGGFGCVYKGVLSDGREVAVKQLKIGGSQGEREFKAEVEI 386
Query: 549 LSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGA 608
+SR+HHR+LV L G CI + +R LVY+ + N +L HLH + + W+ R+++A GA
Sbjct: 387 ISRVHHRHLVTLVGYCISEQHRLLVYDYVPNNTLHYHLHAPGRP--VMTWETRVRVAAGA 444
Query: 609 ARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD-EGNKHISTHVMGT 667
ARG+AYLHED PR+IHRD KSSNILL++ F V+DFGLA+ A + + N H+ST VMGT
Sbjct: 445 ARGIAYLHEDCHPRIIHRDIKSSNILLDNSFEALVADFGLAKIAQELDLNTHVSTRVMGT 504
Query: 668 FGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLL---T 724
FGY+APEYA +G L K+DVYSYGV+LLEL+TGRKPVD SQP G E+LV WARPLL
Sbjct: 505 FGYMAPEYATSGKLSEKADVYSYGVILLELITGRKPVDTSQPLGDESLVEWARPLLGQAI 564
Query: 725 TKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNEFDET 784
E ++DP + N + ++ A+ CV+ + RP M +VV+AL + D T
Sbjct: 565 ENEEFDELVDPRLGKNFIPGEMFRMVEAAAACVRHSAAKRPKMSQVVRALDTLEEATDIT 624
Query: 785 K 785
Sbjct: 625 N 625
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9FE20|PBS1_ARATH Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 310 bits (793), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 157/303 (51%), Positives = 199/303 (65%), Gaps = 2/303 (0%)
Query: 486 AKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDD-GREVAVKVLKRANQHGGREFLA 544
A TF ++ AT FH +GEGGFG VY+G LD G+ VAVK L R G REFL
Sbjct: 71 AHTFAFRELAAATMNFHPDTFLGEGGFGRVYKGRLDSTGQVVAVKQLDRNGLQGNREFLV 130
Query: 545 ELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKI 604
E+ MLS LHH NLV L G C + + R LVYE + GSLE HLH LDW+ RMKI
Sbjct: 131 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNMRMKI 190
Query: 605 ALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHV 664
A GAA+GL +LH+ ++P VI+RDFKSSNILL+ F PK+SDFGLA+ H+ST V
Sbjct: 191 AAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPTGDKSHVSTRV 250
Query: 665 MGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLT 724
MGT+GY APEYAMTG L VKSDVYS+GVV LEL+TGRK +D P G++NLVAWARPL
Sbjct: 251 MGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSEMPHGEQNLVAWARPLFN 310
Query: 725 TKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNE-FDE 783
+ + DP ++ L + A+ASMC+Q + + RP + +VV AL + N+ +D
Sbjct: 311 DRRKFIKLADPRLKGRFPTRALYQALAVASMCIQEQAATRPLIADVVTALSYLANQAYDP 370
Query: 784 TKE 786
+K+
Sbjct: 371 SKD 373
|
Protein kinase required for plant defense mechanism mediated by the disease resistance (R) protein RPS5. In case of infection by Pseudomonas syringae, RPS5 specifically recognizes the avrPphB type III effector avirulence protein and triggers a defense reaction. AvrPphB may trigger RPS5-mediated defense mechanism via the cleavage of PBS1. Both kinase activity and cleavage by avrPphB are independently required to trigger the RPS5-mediated resistance. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SGY7|PEK11_ARATH Putative proline-rich receptor-like protein kinase PERK11 OS=Arabidopsis thaliana GN=PERK11 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 309 bits (791), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 157/296 (53%), Positives = 209/296 (70%), Gaps = 9/296 (3%)
Query: 484 GTAKT-FTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREF 542
GT+K FT ++ + T GF S ++GEGGFG VY+GIL +G+ VA+K LK + G REF
Sbjct: 352 GTSKIHFTYEELSQITEGFCKSFVVGEGGFGCVYKGILFEGKPVAIKQLKSVSAEGYREF 411
Query: 543 LAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGP-LDWDAR 601
AE+E++SR+HHR+LV L G CI + +R L+YE + N +L+ HLHG N P L+W R
Sbjct: 412 KAEVEIISRVHHRHLVSLVGYCISEQHRFLIYEFVPNNTLDYHLHGK---NLPVLEWSRR 468
Query: 602 MKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIS 661
++IA+GAA+GLAYLHED P++IHRD KSSNILL+ +F +V+DFGLAR D HIS
Sbjct: 469 VRIAIGAAKGLAYLHEDCHPKIIHRDIKSSNILLDDEFEAQVADFGLARLN-DTAQSHIS 527
Query: 662 THVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARP 721
T VMGTFGYLAPEYA +G L +SDV+S+GVVLLEL+TGRKPVD SQP G+E+LV WARP
Sbjct: 528 TRVMGTFGYLAPEYASSGKLTDRSDVFSFGVVLLELITGRKPVDTSQPLGEESLVEWARP 587
Query: 722 LL---TTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL 774
L K + ++DP +E++ + K+ A+ CV+ RP M +VV+AL
Sbjct: 588 RLIEAIEKGDISEVVDPRLENDYVESEVYKMIETAASCVRHSALKRPRMVQVVRAL 643
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9CAL8|PEK13_ARATH Proline-rich receptor-like protein kinase PERK13 OS=Arabidopsis thaliana GN=PERK13 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 306 bits (783), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 172/408 (42%), Positives = 235/408 (57%), Gaps = 37/408 (9%)
Query: 399 PMRKKGGLRGSMIAAIVLSSFTALVLCFGIAVFLLKRGAFRQPEQTPHDVICAPAKLSGA 458
P GG +G +A ++ F + L VFL++R R + P+ S
Sbjct: 224 PANSGGGYQGKTMAGFAIAGFAVIALM--AVVFLVRRKKKRNIDAYSDSQYLPPSNFSIK 281
Query: 459 TTTLRYGS---------------MLSSSSVSIDS----CAVTYTGTA----------KTF 489
+ YG S+S S S T +G+A F
Sbjct: 282 SDGFLYGQNPTKGYSGPGGYNSQQQSNSGNSFGSQRGGGGYTRSGSAPDSAVMGSGQTHF 341
Query: 490 TLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEML 549
T ++ T GF I+GEGGFG VY+G L+DG+ VAVK LK + G REF AE+E++
Sbjct: 342 TYEELTDITEGFSKHNILGEGGFGCVYKGKLNDGKLVAVKQLKVGSGQGDREFKAEVEII 401
Query: 550 SRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAA 609
SR+HHR+LV L G CI D+ R L+YE + N +LE HLHG K L+W R++IA+G+A
Sbjct: 402 SRVHHRHLVSLVGYCIADSERLLIYEYVPNQTLEHHLHG--KGRPVLEWARRVRIAIGSA 459
Query: 610 RGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFG 669
+GLAYLHED P++IHRD KS+NILL+ +F +V+DFGLA+ D H+ST VMGTFG
Sbjct: 460 KGLAYLHEDCHPKIIHRDIKSANILLDDEFEAQVADFGLAKLN-DSTQTHVSTRVMGTFG 518
Query: 670 YLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLL---TTK 726
YLAPEYA +G L +SDV+S+GVVLLEL+TGRKPVD QP G+E+LV WARPLL
Sbjct: 519 YLAPEYAQSGKLTDRSDVFSFGVVLLELITGRKPVDQYQPLGEESLVEWARPLLHKAIET 578
Query: 727 EGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL 774
++D +E + + + ++ A+ CV+ RP M +VV+AL
Sbjct: 579 GDFSELVDRRLEKHYVENEVFRMIETAAACVRHSGPKRPRMVQVVRAL 626
|
Regulates negatively root hairs elongation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LFP7|Y5158_ARATH Probable receptor-like protein kinase At5g15080 OS=Arabidopsis thaliana GN=At5g15080 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 303 bits (775), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 160/333 (48%), Positives = 215/333 (64%), Gaps = 16/333 (4%)
Query: 453 AKLSGATTTLRYGSMLSSSSVSIDSCAVTYTGTAKTFTLNDIEKATNGFHTSRIIGEGGF 512
++S TTT + SSSS + S + + + FT ND++ +T F ++GEGGF
Sbjct: 97 GQVSSTTTT---SNAESSSSTPVISEELNISSHLRKFTFNDLKLSTRNFRPESLLGEGGF 153
Query: 513 GVVYRGILDD----------GREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFG 562
G V++G +++ G VAVK L G +E+LAE+ L L H NLVKL G
Sbjct: 154 GCVFKGWIEENGTAPVKPGTGLTVAVKTLNPDGLQGHKEWLAEINFLGNLLHPNLVKLVG 213
Query: 563 VCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPR 622
CIED+ R LVYE + GSLE+HL + + PL W RMKIALGAA+GL++LHE++
Sbjct: 214 YCIEDDQRLLVYEFMPRGSLENHLF---RRSLPLPWSIRMKIALGAAKGLSFLHEEALKP 270
Query: 623 VIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLL 682
VI+RDFK+SNILL+ D+ K+SDFGLA+ A DEG H+ST VMGT+GY APEY MTGHL
Sbjct: 271 VIYRDFKTSNILLDADYNAKLSDFGLAKDAPDEGKTHVSTRVMGTYGYAAPEYVMTGHLT 330
Query: 683 VKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESNIS 742
KSDVYS+GVVLLE+LTGR+ +D ++P G+ NLV WARP L K ++DP +E + S
Sbjct: 331 SKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLLDKRRFYRLLDPRLEGHFS 390
Query: 743 YDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775
KV +A+ C+ + RP M +VV+ALK
Sbjct: 391 IKGAQKVTQLAAQCLSRDPKIRPKMSDVVEALK 423
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LV48|PERK1_ARATH Proline-rich receptor-like protein kinase PERK1 OS=Arabidopsis thaliana GN=PERK1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 301 bits (771), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 147/291 (50%), Positives = 206/291 (70%), Gaps = 6/291 (2%)
Query: 488 TFTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELE 547
TFT ++ +ATNGF + ++G+GGFG V++GIL G+EVAVK LK + G REF AE+E
Sbjct: 267 TFTYEELSRATNGFSEANLLGQGGFGYVHKGILPSGKEVAVKQLKAGSGQGEREFQAEVE 326
Query: 548 MLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALG 607
++SR+HHR+LV L G C+ R LVYE + N +LE HLHG + ++W R+KIALG
Sbjct: 327 IISRVHHRHLVSLIGYCMAGVQRLLVYEFVPNNNLEFHLHGKGRPT--MEWSTRLKIALG 384
Query: 608 AARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGT 667
+A+GL+YLHED +P++IHRD K+SNIL++ F KV+DFGLA+ A D N H+ST VMGT
Sbjct: 385 SAKGLSYLHEDCNPKIIHRDIKASNILIDFKFEAKVADFGLAKIASDT-NTHVSTRVMGT 443
Query: 668 FGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLT--T 725
FGYLAPEYA +G L KSDV+S+GVVLLEL+TGR+PVD + ++LV WARPLL +
Sbjct: 444 FGYLAPEYAASGKLTEKSDVFSFGVVLLELITGRRPVDANNVYVDDSLVDWARPLLNRAS 503
Query: 726 KEG-LKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775
+EG + + D + + + + ++ A A+ CV+ RP M ++V+AL+
Sbjct: 504 EEGDFEGLADSKMGNEYDREEMARMVACAAACVRHSARRRPRMSQIVRALE 554
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9ZUE0|PEK12_ARATH Proline-rich receptor-like protein kinase PERK12 OS=Arabidopsis thaliana GN=PERK12 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 301 bits (770), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 152/295 (51%), Positives = 203/295 (68%), Gaps = 7/295 (2%)
Query: 484 GTAKT-FTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREF 542
G+ +T F+ ++ + T GF I+GEGGFG VY+G L DG+ VAVK LK + G REF
Sbjct: 353 GSGQTHFSYEELAEITQGFARKNILGEGGFGCVYKGTLQDGKVVAVKQLKAGSGQGDREF 412
Query: 543 LAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARM 602
AE+E++SR+HHR+LV L G CI D +R L+YE + N +LE HLHG K L+W R+
Sbjct: 413 KAEVEIISRVHHRHLVSLVGYCISDQHRLLIYEYVSNQTLEHHLHG--KGLPVLEWSKRV 470
Query: 603 KIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIST 662
+IA+G+A+GLAYLHED P++IHRD KS+NILL+ ++ +V+DFGLAR D H+ST
Sbjct: 471 RIAIGSAKGLAYLHEDCHPKIIHRDIKSANILLDDEYEAQVADFGLARLN-DTTQTHVST 529
Query: 663 HVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPL 722
VMGTFGYLAPEYA +G L +SDV+S+GVVLLEL+TGRKPVD +QP G+E+LV WARPL
Sbjct: 530 RVMGTFGYLAPEYASSGKLTDRSDVFSFGVVLLELVTGRKPVDQTQPLGEESLVEWARPL 589
Query: 723 L---TTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL 774
L L +ID +E + ++ A+ CV+ RP M +VV+AL
Sbjct: 590 LLKAIETGDLSELIDTRLEKRYVEHEVFRMIETAAACVRHSGPKRPRMVQVVRAL 644
|
Regulates the auxin-related MAX (More Axillary Growth) pathway during the shoot branching. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 897 | ||||||
| 359482516 | 873 | PREDICTED: receptor-like serine/threonin | 0.859 | 0.883 | 0.674 | 0.0 | |
| 449480567 | 899 | PREDICTED: LOW QUALITY PROTEIN: receptor | 0.967 | 0.965 | 0.588 | 0.0 | |
| 449447857 | 899 | PREDICTED: receptor-like serine/threonin | 0.967 | 0.965 | 0.588 | 0.0 | |
| 307136283 | 902 | protein kinase [Cucumis melo subsp. melo | 0.969 | 0.964 | 0.589 | 0.0 | |
| 255572945 | 846 | ATP binding protein, putative [Ricinus c | 0.909 | 0.964 | 0.643 | 0.0 | |
| 297743085 | 815 | unnamed protein product [Vitis vinifera] | 0.904 | 0.995 | 0.597 | 0.0 | |
| 356522430 | 848 | PREDICTED: receptor-like serine/threonin | 0.914 | 0.966 | 0.620 | 0.0 | |
| 351725445 | 886 | protein kinase family protein [Glycine m | 0.869 | 0.880 | 0.616 | 0.0 | |
| 147856502 | 772 | hypothetical protein VITISV_031742 [Viti | 0.855 | 0.993 | 0.542 | 0.0 | |
| 359484309 | 992 | PREDICTED: receptor-like serine/threonin | 0.948 | 0.857 | 0.541 | 0.0 |
| >gi|359482516|ref|XP_002275886.2| PREDICTED: receptor-like serine/threonine-protein kinase ALE2-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1014 bits (2621), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/792 (67%), Positives = 613/792 (77%), Gaps = 21/792 (2%)
Query: 124 KKWVHGPASSPFIPFHRHHHVRNKSRNSGSGPAYPTPAPSNSQQGPSVPSFQSPLPSSSS 183
KK VHG ASSP F+RHHH RNK RNS P++ SQQGPSV SF SP+PSS+S
Sbjct: 83 KKHVHGSASSPTTSFYRHHHARNKFRNSAPAPSHLLSPHPYSQQGPSVSSFHSPVPSSTS 142
Query: 184 WSSHAPAPSPKATSGNLNLPSLR----------------PTISPTSSSLKKMKTPPPSSV 227
W S +PAPSP S +N+ + P ++P SSLK MKTPPP V
Sbjct: 143 WGSPSPAPSPAPLSRQINMIINKYHAVIMFCVCKVHFHPPAVAPLGSSLKNMKTPPPPLV 202
Query: 228 MTLPPPPPNEDCGSVTCTEPLTYTPPGSPCGCVWPIQVKLALDVPIYTFFPLVSQLTEEI 287
TLPPPPPNEDC S+TCTEPLTYTPPGSPCGCVWPIQVKL L V +YTFFPLVS+L +EI
Sbjct: 203 WTLPPPPPNEDCASLTCTEPLTYTPPGSPCGCVWPIQVKLRLSVALYTFFPLVSELADEI 262
Query: 288 AASVGLNHSQVRVMGANAASQQLQKSTALINLVPLGVQFDDTVAFLIFKKFWQRQVFIKP 347
AA V LNHSQVR+MGANAA+QQL K+ LI+LVPLG +F+ T AF I++KFW ++ FIK
Sbjct: 263 AAGVSLNHSQVRIMGANAANQQLDKTIILIDLVPLGEKFNHTTAFSIYEKFWLKKFFIKT 322
Query: 348 SLFGAYEVLYVHYPGLPPSPPSQSSISTEDDGPYAGRDNKRQALKPLGVEVPMRKKGGLR 407
SL+G YE LYV YPGLPPS SSIS DDG Y+G N + +KPLGV+VP ++K GL
Sbjct: 323 SLYGGYEALYVRYPGLPPS--PPSSISNIDDGSYSGHGNNGRVMKPLGVDVPQKQKHGLG 380
Query: 408 GSMIAAIVLSSFTALVLCFGIA-VFLLK-RGAFRQPEQTPHDVICAPAKLSGATTTLRYG 465
GSMI IVLSS T V+C +A V +LK RG Q E PH +I + AK SGA ++ G
Sbjct: 381 GSMITVIVLSSVTGFVICIAVAWVLVLKCRGHVHQAEDIPHSLISSFAKPSGAAGSMMLG 440
Query: 466 SMLSSSSVSIDSCAVTYTGTAKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGRE 525
S SS+SVS S VTYTG+AKTF+LNDIE+AT+ F SR++GEGGFG+VYRGILDDG E
Sbjct: 441 SRTSSTSVSFSSGVVTYTGSAKTFSLNDIERATDNFDASRVLGEGGFGLVYRGILDDGVE 500
Query: 526 VAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESH 585
VAVKVLKR +Q GGREFLAE+EMLSRLHHRNLVKL G+C E++ RCLVYEL+ NGS+ESH
Sbjct: 501 VAVKVLKRDDQQGGREFLAEVEMLSRLHHRNLVKLIGICTEEHTRCLVYELVPNGSVESH 560
Query: 586 LHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSD 645
LHG DK PLDW ARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSD
Sbjct: 561 LHGVDKEASPLDWGARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSD 620
Query: 646 FGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 705
FGLARTALDEGNKHIST VMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD
Sbjct: 621 FGLARTALDEGNKHISTRVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 680
Query: 706 LSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRP 765
LSQPPGQENLVAWARPLLTTKEGL+TIIDP ++S+ +D+ KVAAIASMCVQPEVSHRP
Sbjct: 681 LSQPPGQENLVAWARPLLTTKEGLETIIDPALKSSSPFDSAAKVAAIASMCVQPEVSHRP 740
Query: 766 FMGEVVQALKLVCNEFDETKETIESRDLSEDCSISVDSKVNRLSGEFVEALEVCHTRSGY 825
FMGEVVQALKLVC+E+DETK+ E+ SI V K +R+ GE +E +V H +G+
Sbjct: 741 FMGEVVQALKLVCSEYDETKDLASKSFSQENLSIDVIRKSSRVLGELLEVSQVHHPVAGH 800
Query: 826 GVGHDNSMAISASEMI-TPMGLEGQESGSFRRHSSSGPLRSEGRRQFWQILKSSSRGSMR 884
D MA+S S+++ T MG EGQ+SGSFRR+SSSGPL + RR+FWQ L+ SS GS
Sbjct: 801 DSSFDTKMALSVSDLVSTSMGFEGQDSGSFRRYSSSGPLSTGRRREFWQRLRRSSGGSAS 860
Query: 885 EHGFSSKFWPES 896
EHGFS K WP S
Sbjct: 861 EHGFSFKLWPRS 872
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449480567|ref|XP_004155932.1| PREDICTED: LOW QUALITY PROTEIN: receptor-like serine/threonine-protein kinase ALE2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 974 bits (2517), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/905 (58%), Positives = 640/905 (70%), Gaps = 37/905 (4%)
Query: 1 MGLLFAFMVMALCATPSALSLRGSAVTVALPPRRLPQNLPNIQPVSPGHPPSILPDHTYS 60
MG F++ + S S+ +AV + P RL S H S+L DH +
Sbjct: 24 MGFRLLFLLFQIGFAVSFFSVCEAAVVL---PGRL----------SGSH--SVLRDHAVT 68
Query: 61 PIRSPHGSGRKSHGEVL-PPPNKPHHISSTKHYSPTKGAHSHDAMRPSSITPAPSSLSSF 119
P + HG GRK HG + P KP SS + +S K S D+ R SI P++
Sbjct: 69 P--TSHGFGRKHHGNLYSAAPRKPFKTSSPQIHSHYKAFQSDDSSRAPSIALPPTT---- 122
Query: 120 RGPTKKWVHGPASSPFIPFHRHHHVRNKSRNSGSGPAYPTPAPSNSQQGPSVPS-FQSPL 178
P KKW H SP I FH+ H R K RN+ P Y P++S+QGP+ S QSPL
Sbjct: 123 --PAKKWGHEHTFSPSISFHKFRHSRRKFRNNAPQPTYHALPPTSSRQGPAAVSPIQSPL 180
Query: 179 PSSSSWSSHAPAPSPKATSGNLNLPSLRPTISPTSSSLKKMKTPPPSSVMTLPPPPPNED 238
PS++ PAPSP + +P PT SP S KK K+ PPS VM LPPPPPN D
Sbjct: 181 PSAARGRYPGPAPSPTIRPSHYYMPIPAPTTSPMGS-YKKKKSMPPSQVMMLPPPPPNGD 239
Query: 239 CGSVTCTEPLTYTPPGSPCGCVWPIQVKLALDVPIYTFFPLVSQLTEEIAASVGLNHSQV 298
C +++CTEPLTYTPPG+PCGCVWPIQV++ LDV +Y FFPLVS+L EEIA S+ LN SQV
Sbjct: 240 C-TISCTEPLTYTPPGTPCGCVWPIQVQITLDVAVYVFFPLVSKLAEEIADSISLNQSQV 298
Query: 299 RVMGANAASQQLQKSTALINLVPLGVQFDDTVAFLIFKKFWQRQVFIKPSLFGAYEVLYV 358
R+MGA+AASQQL+K+T +INLVP G +F+ AF I++KFW R++ I SLFG Y+VL V
Sbjct: 299 RIMGADAASQQLEKTTVIINLVPRGSRFNHNTAFSIYQKFWGRKISINSSLFGRYQVLNV 358
Query: 359 HYPGLPPSPPSQSSISTE-DDGPYAGRDNKRQALKPLGVEVPMRKKGGLRGSMIAAIVLS 417
YPGLPPSPP S ++ +DG N A+KPLGV+VP RKK GL +MIA I +S
Sbjct: 359 KYPGLPPSPPLAPSSTSSINDGLNTSNTNAGTAIKPLGVDVPRRKKEGLGSNMIAVITIS 418
Query: 418 SFTALVLCFGIA--VFLLKRGAFRQPEQTPHDVICAPAKLSGATTTLRYGSMLSSSSVSI 475
SFTALV+C G+A L R + P Q P ++I +P K SG + GS SSS+ +
Sbjct: 419 SFTALVMCVGLAWLCLLRYRVSAHPPAQIPQNMIASPTKPSGTAGLIMVGSEPGSSSMPL 478
Query: 476 DSCAVTYTGTAKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRAN 535
D+ +TY G AK FTL D+EK+T+ F T+RI+GEGGFG+VY G L+DGR+VAVKVLKR N
Sbjct: 479 DADPMTYIGAAKNFTLKDMEKSTDNFDTARILGEGGFGIVYSGSLEDGRDVAVKVLKRHN 538
Query: 536 QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGP 595
QHG REFLAE+EMLSRLHHRNLVKL G+C ED RCLVYEL+ NGS+ESHLHG DK+ P
Sbjct: 539 QHGIREFLAEVEMLSRLHHRNLVKLIGICTEDQIRCLVYELVPNGSVESHLHGIDKLTSP 598
Query: 596 LDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655
LDWDARMKIALGAARGLAYLHEDS+PRVIHRDFK+SNILLE+DFTPKVSDFGLARTAL+E
Sbjct: 599 LDWDARMKIALGAARGLAYLHEDSNPRVIHRDFKASNILLEYDFTPKVSDFGLARTALEE 658
Query: 656 GNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENL 715
GNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLS PPGQENL
Sbjct: 659 GNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSLPPGQENL 718
Query: 716 VAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775
VAWARPLLT+KEGL I DP I+S+IS D+L +VAAIASMCVQPEVSHRPFMGEVVQALK
Sbjct: 719 VAWARPLLTSKEGLDAITDPAIKSDISIDSLARVAAIASMCVQPEVSHRPFMGEVVQALK 778
Query: 776 LVCNEFDETKETIESRDLSEDCSIS-VDSKVNRLSGEFVEALEVCHTRSGYGVGHDNSMA 834
LVCNEF+ET + + SR S D +S +DSK +SGE + A E HT + G + ++
Sbjct: 779 LVCNEFEETNDPV-SRSYSRDELLSYMDSKFGGISGEILNAPETSHT---FLSGKETNVG 834
Query: 835 ISASEMITPMG-LEGQESGSFRRHSS-SGPLRSEGRRQFWQILKSSSRGSMREHGFSSKF 892
+SAS++I+ EGQE S R HSS S PLR+ ++ WQ L+S SRGS EHGFS+K
Sbjct: 835 LSASDLISASARFEGQELVSSRWHSSNSEPLRTGXKKHLWQKLRSLSRGSFSEHGFSAKL 894
Query: 893 WPESH 897
WP H
Sbjct: 895 WPGFH 899
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449447857|ref|XP_004141683.1| PREDICTED: receptor-like serine/threonine-protein kinase ALE2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 974 bits (2517), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/905 (58%), Positives = 640/905 (70%), Gaps = 37/905 (4%)
Query: 1 MGLLFAFMVMALCATPSALSLRGSAVTVALPPRRLPQNLPNIQPVSPGHPPSILPDHTYS 60
MG F++ + S S+ +AV + P RL S H S+L DH +
Sbjct: 24 MGFRLLFLLFQIGFAVSFFSVCEAAVVL---PGRL----------SGSH--SVLRDHAVT 68
Query: 61 PIRSPHGSGRKSHGEVL-PPPNKPHHISSTKHYSPTKGAHSHDAMRPSSITPAPSSLSSF 119
P + HG GRK HG + P KP SS + +S K S D+ R SI P++
Sbjct: 69 P--TSHGFGRKHHGNLYSAAPRKPFKTSSPQIHSHYKAFQSDDSSRAPSIALPPTT---- 122
Query: 120 RGPTKKWVHGPASSPFIPFHRHHHVRNKSRNSGSGPAYPTPAPSNSQQGPSVPS-FQSPL 178
P KKW H SP I FH+ H R K RN+ P Y P++S+QGP+ S QSPL
Sbjct: 123 --PAKKWGHEHTFSPSISFHKFRHSRRKFRNNAPQPTYHALPPTSSRQGPAAVSPIQSPL 180
Query: 179 PSSSSWSSHAPAPSPKATSGNLNLPSLRPTISPTSSSLKKMKTPPPSSVMTLPPPPPNED 238
PS++ PAPSP + +P PT SP S KK K+ PPS VM LPPPPPN D
Sbjct: 181 PSAARGRYPGPAPSPTIRPSHYYMPIPAPTTSPMGS-YKKKKSMPPSQVMMLPPPPPNGD 239
Query: 239 CGSVTCTEPLTYTPPGSPCGCVWPIQVKLALDVPIYTFFPLVSQLTEEIAASVGLNHSQV 298
C +++CTEPLTYTPPG+PCGCVWPIQV++ LDV +Y FFPLVS+L EEIA S+ LN SQV
Sbjct: 240 C-TISCTEPLTYTPPGTPCGCVWPIQVQITLDVAVYVFFPLVSKLAEEIADSISLNQSQV 298
Query: 299 RVMGANAASQQLQKSTALINLVPLGVQFDDTVAFLIFKKFWQRQVFIKPSLFGAYEVLYV 358
R+MGA+AASQQL+K+T +INLVP G +F+ AF I++KFW R++ I SLFG Y+VL V
Sbjct: 299 RIMGADAASQQLEKTTVIINLVPRGSRFNHNTAFSIYQKFWGRKISINSSLFGRYQVLNV 358
Query: 359 HYPGLPPSPPSQSSISTE-DDGPYAGRDNKRQALKPLGVEVPMRKKGGLRGSMIAAIVLS 417
YPGLPPSPP S ++ +DG N A+KPLGV+VP RKK GL +MIA I +S
Sbjct: 359 KYPGLPPSPPLAPSSTSSINDGLNTSNTNAGTAIKPLGVDVPRRKKEGLGSNMIAVITIS 418
Query: 418 SFTALVLCFGIA--VFLLKRGAFRQPEQTPHDVICAPAKLSGATTTLRYGSMLSSSSVSI 475
SFTALV+C G+A L R + P Q P ++I +P K SG + GS SSS+ +
Sbjct: 419 SFTALVMCVGLAWLCLLRYRVSAHPPAQIPQNMIASPTKPSGTAGLIMVGSEPGSSSMPL 478
Query: 476 DSCAVTYTGTAKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRAN 535
D+ +TY G AK FTL D+EK+T+ F T+RI+GEGGFG+VY G L+DGR+VAVKVLKR N
Sbjct: 479 DADPMTYIGAAKNFTLKDMEKSTDNFDTARILGEGGFGIVYSGSLEDGRDVAVKVLKRHN 538
Query: 536 QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGP 595
QHG REFLAE+EMLSRLHHRNLVKL G+C ED RCLVYEL+ NGS+ESHLHG DK+ P
Sbjct: 539 QHGIREFLAEVEMLSRLHHRNLVKLIGICTEDQIRCLVYELVPNGSVESHLHGIDKLTSP 598
Query: 596 LDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655
LDWDARMKIALGAARGLAYLHEDS+PRVIHRDFK+SNILLE+DFTPKVSDFGLARTAL+E
Sbjct: 599 LDWDARMKIALGAARGLAYLHEDSNPRVIHRDFKASNILLEYDFTPKVSDFGLARTALEE 658
Query: 656 GNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENL 715
GNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLS PPGQENL
Sbjct: 659 GNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSLPPGQENL 718
Query: 716 VAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775
VAWARPLLT+KEGL I DP I+S+IS D+L +VAAIASMCVQPEVSHRPFMGEVVQALK
Sbjct: 719 VAWARPLLTSKEGLDAITDPAIKSDISIDSLARVAAIASMCVQPEVSHRPFMGEVVQALK 778
Query: 776 LVCNEFDETKETIESRDLSEDCSIS-VDSKVNRLSGEFVEALEVCHTRSGYGVGHDNSMA 834
LVCNEF+ET + + SR S D +S +DSK +SGE + A E HT + G + ++
Sbjct: 779 LVCNEFEETNDPV-SRSYSRDELLSYMDSKFGGISGEILNAPETSHT---FLSGKETNVG 834
Query: 835 ISASEMITPMG-LEGQESGSFRRHSS-SGPLRSEGRRQFWQILKSSSRGSMREHGFSSKF 892
+SAS++I+ EGQE S R HSS S PLR+ ++ WQ L+S SRGS EHGFS+K
Sbjct: 835 LSASDLISASARFEGQELVSSRWHSSNSEPLRTGRKKHLWQKLRSLSRGSFSEHGFSAKL 894
Query: 893 WPESH 897
WP H
Sbjct: 895 WPGFH 899
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|307136283|gb|ADN34110.1| protein kinase [Cucumis melo subsp. melo] | Back alignment and taxonomy information |
|---|
Score = 967 bits (2499), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/906 (58%), Positives = 639/906 (70%), Gaps = 36/906 (3%)
Query: 1 MGLLFAFMVMALCATPSALSLRGSAVTVALPPRRLPQNLPNIQPVSPGHPPSILPDHTYS 60
MG F++ +C S + +AV + P RL ++ S+L DH +
Sbjct: 24 MGFRLLFLLFQICFAVSFFCVCEAAVVL---PGRLSRS------------HSVLRDHAVT 68
Query: 61 PIRSPHGSGRKSHGEV-LPPPNKPHHISSTKHYSPTKGAHSHDAMRPSSITPAPSSLSSF 119
P + HG GRK HG + P KP SS + +S K H D SS+TP+ +L
Sbjct: 69 P--TSHGFGRKHHGNLDNAAPRKPFKTSSPQIHSHYKAIHQSDD---SSLTPS-IALPPI 122
Query: 120 RGPTKKWVHGPASSPFIPFHRHHHVRNKSRNSGSGPAYPTPAPSNSQQGPSVPS-FQSPL 178
P KKW H SP I FH+ H R K RN P Y P++SQQGP+ S QSPL
Sbjct: 123 T-PAKKWGHEHTFSPSISFHKFRHSRRKFRNHAPQPTYHALPPTSSQQGPAAVSPIQSPL 181
Query: 179 PSSSSWSSHAPAPSPKATSGNLNLPSLRPTISPTSS-SLKKMKTPPPSSVMTLPPPPPNE 237
PS++ P PSP + +P PT SP S KK K+ PPS VM LPPPPPN
Sbjct: 182 PSAARGRYPGPTPSPTTQPNHYYMPIPAPTTSPMGSYKKKKKKSMPPSQVMMLPPPPPNG 241
Query: 238 DCGSVTCTEPLTYTPPGSPCGCVWPIQVKLALDVPIYTFFPLVSQLTEEIAASVGLNHSQ 297
DC +++CTEPLTYTPPG+PCGCVWPIQVK+ LDV +Y FFPLVS+L +EIA S+ LN SQ
Sbjct: 242 DC-TISCTEPLTYTPPGTPCGCVWPIQVKITLDVAVYEFFPLVSKLADEIADSISLNQSQ 300
Query: 298 VRVMGANAASQQLQKSTALINLVPLGVQFDDTVAFLIFKKFWQRQVFIKPSLFGAYEVLY 357
VR+MGA+AASQQL+K+T +INLVP G +F+ AF I++KFW R++ I SLFG Y+VL
Sbjct: 301 VRIMGADAASQQLEKTTVIINLVPRGSRFNHNTAFSIYQKFWGRKISINASLFGRYQVLN 360
Query: 358 VHYPGLPPSPPSQSSISTE-DDGPYAGRDNKRQALKPLGVEVPMRKKGGLRGSMIAAIVL 416
V YPGLPPSPP S ++ +DG N A+KPLGV+VP RKK GL +MIA I +
Sbjct: 361 VKYPGLPPSPPLAPSSTSSINDGLNTSNTNAGTAIKPLGVDVPRRKKEGLGRNMIAVITI 420
Query: 417 SSFTALVLCFGIA--VFLLKRGAFRQPEQTPHDVICAPAKLSGATTTLRYGSMLSSSSVS 474
SSFTALV+C G+A L R + QP Q P ++I +P K SG + GS SSS
Sbjct: 421 SSFTALVMCVGLAWLCLLRYRVSAHQPAQIPQNLIASPTKPSGTAGLIMVGSEPGSSSTR 480
Query: 475 IDSCAVTYTGTAKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRA 534
+D+ +TY G AK FTLND+EKAT+ F ++RI+GEGGFG+VY G L+DGR+VAVKVLKR
Sbjct: 481 LDADPMTYIGAAKNFTLNDMEKATDNFDSARILGEGGFGIVYSGSLEDGRDVAVKVLKRH 540
Query: 535 NQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNG 594
NQHG REFLAE+EMLSRLHHRNLVKL G+C ED RCLVYEL+ NGS+ESHLHG DK+
Sbjct: 541 NQHGIREFLAEVEMLSRLHHRNLVKLIGICTEDQIRCLVYELVPNGSVESHLHGIDKLTS 600
Query: 595 PLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654
PLDWDARMKIALGAARGLAYLHEDS+PRVIHRDFK+SNILLE+DFTPKVSDFGLARTAL+
Sbjct: 601 PLDWDARMKIALGAARGLAYLHEDSNPRVIHRDFKASNILLEYDFTPKVSDFGLARTALE 660
Query: 655 EGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQEN 714
EGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLS PPGQEN
Sbjct: 661 EGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSLPPGQEN 720
Query: 715 LVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL 774
LVAWARPLLT+KEGL I DP I+S+IS D+L +VAAIASMCVQPEVSHRPFMGEVVQAL
Sbjct: 721 LVAWARPLLTSKEGLDAITDPAIKSDISIDSLARVAAIASMCVQPEVSHRPFMGEVVQAL 780
Query: 775 KLVCNEFDETKETIESRDLSEDCSIS-VDSKVNRLSGEFVEALEVCHTRSGYGVGHDNSM 833
KLVCNEF+ET + + SR S D +S +DSK +SGE + A E T Y G + ++
Sbjct: 781 KLVCNEFEETNDPV-SRSYSRDELLSYMDSKFGGISGEILNAPESSRT---YLSGKETNV 836
Query: 834 AISASEMITPMG-LEGQESGSFRRHSS-SGPLRSEGRRQFWQILKSSSRGSMREHGFSSK 891
+SAS++I+ EGQE S R HSS S PLR+ ++ WQ L+S SRGS EHGFS+K
Sbjct: 837 GLSASDLISASARFEGQELVSSRWHSSNSEPLRTGRKKHLWQKLRSLSRGSFSEHGFSAK 896
Query: 892 FWPESH 897
WP H
Sbjct: 897 LWPGFH 902
|
Source: Cucumis melo subsp. melo Species: Cucumis melo Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255572945|ref|XP_002527403.1| ATP binding protein, putative [Ricinus communis] gi|223533213|gb|EEF34969.1| ATP binding protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 966 bits (2498), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/845 (64%), Positives = 623/845 (73%), Gaps = 29/845 (3%)
Query: 56 DHTYSPIRSPHGSGRKSHGEV-LPPPNKPHHISSTKHYSPTKGAHSHDAMRPSSITPAPS 114
D + SP +SP G GR HG + PPN+ H SS+ PTK H +A+RPSSI PS
Sbjct: 22 DTSISPKQSPSGFGRSRHGRLGTLPPNRAFHSSSSGDQFPTKVPHPPNAIRPSSIALPPS 81
Query: 115 SLSSFRGPTKKWVHG-PASSPFIPFHR-HHHVRNKSRNSGSGPAYPTPAPSNSQQGPSVP 172
+ S HG PA SP HR H+H R+ R P+ P+PS Q+ PSVP
Sbjct: 82 TSS----------HGSPAFSPSSSIHRNHYHARSHHRPLE--PSRLNPSPSYIQRAPSVP 129
Query: 173 SFQSPLPSSSSWSSHAPAPSPKATSGNLNLPSLRPTISPTSSSLKKMKTPPPSSVMTLPP 232
+ +SP SS SW S APA SP +L++ + P SP S LKKMK P PS +M+LPP
Sbjct: 130 TLRSPSSSSMSWGSIAPALSPANHWSHLSMHTHPPATSPLGSYLKKMKAPQPSQIMSLPP 189
Query: 233 PPPNEDCGSVTCTEPLTYTPPGSPCGCVWPIQVKLALDVPIYTFFPLVSQLTEEIAASVG 292
PPP+ DC S+TCTEPLTYTPPG+ CGCV+PIQVKL L V IYTFF LV++L EEIAASV
Sbjct: 190 PPPSGDCASITCTEPLTYTPPGTFCGCVFPIQVKLRLGVAIYTFFTLVTELAEEIAASVA 249
Query: 293 LNHSQVRVMGANAASQQLQKSTALINLVPLGVQFDDTVAFLIFKKFWQRQVFIKPSLFGA 352
LNHSQVR+MGANAAS+QL+KS LINLVP GV+F D A I++KFW R+V IK SLFG
Sbjct: 250 LNHSQVRIMGANAASRQLEKSNVLINLVPGGVKFSDNSAMSIYRKFWNREVHIKASLFGT 309
Query: 353 YEVLYVHYPGLPPSPPSQSSISTEDDGPYAGRDNKRQALKPLGVEVPMRKKGGLRGSMIA 412
Y+VLYVHYPGLP SPPS SIST DD PY+ DN KPLGV VP RKK GL G M+A
Sbjct: 310 YDVLYVHYPGLPSSPPSPLSISTIDDEPYSNHDNNGITNKPLGVNVPRRKKDGLAGGMVA 369
Query: 413 AIVLSSFTALVLCFGIA-VFLLKRG-AFRQPEQTPHDVICAPAKLSGATTTLRYGSMLSS 470
IVLSS TALV+C + + LLK G QP + P K SG + YGSM SS
Sbjct: 370 IIVLSSVTALVICMAVLWLLLLKCGNCIHQPWPVIKASVSLPEKPSGTAVPVTYGSMPSS 429
Query: 471 SSVSIDSCAVTYTGTAKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKV 530
+S+S S A+TYTG+ K F+L DIE+AT F +SRI+GEGGFG+VY G LDDGREVAVKV
Sbjct: 430 ASMSFSSGAMTYTGSVKVFSLIDIERATKNFDSSRILGEGGFGLVYHGKLDDGREVAVKV 489
Query: 531 LKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDD 590
LKRA+QHGGREFLAE+EML RLHHRNLVKL G+C E N R L+YELI +GSLESHLHG D
Sbjct: 490 LKRADQHGGREFLAEVEMLGRLHHRNLVKLIGICTEANTRSLIYELIPSGSLESHLHGVD 549
Query: 591 KVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR 650
KV PLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR
Sbjct: 550 KVTDPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR 609
Query: 651 TALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPP 710
A+D+GNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP+DLSQPP
Sbjct: 610 AAMDDGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPLDLSQPP 669
Query: 711 GQENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEV 770
GQENLV +ARPLLT KEGL+T+IDP I+S +S+DT+ KVAAIASMCVQPEVSHRPFMGEV
Sbjct: 670 GQENLVGYARPLLTIKEGLETVIDPAIKSTVSFDTIFKVAAIASMCVQPEVSHRPFMGEV 729
Query: 771 VQALKLVCNEFDETKETIESRDLSEDCSISVDSKVNRLSGEFVEALEVCHTRSGYGVGHD 830
VQALKLVCNEFDET+ +E+ VDSK R+ GE +E + H
Sbjct: 730 VQALKLVCNEFDETEVQPSRSRSNENLLTDVDSKKIRVPGEIIEVSQ-SHL--------- 779
Query: 831 NSMAISASEMITP-MGLEGQESGSFRRHSSSGPLRSEGRRQFWQILKSSSRGSMREHGFS 889
+ +S S++ T GLEGQE GSFRR+SSSGPL + RRQFWQ L+S S GSM EHGFS
Sbjct: 780 -PLPLSKSDLFTTSTGLEGQEFGSFRRYSSSGPLSTGKRRQFWQRLRSLSGGSMSEHGFS 838
Query: 890 SKFWP 894
K WP
Sbjct: 839 LKLWP 843
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297743085|emb|CBI35952.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 965 bits (2495), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/899 (59%), Positives = 619/899 (68%), Gaps = 88/899 (9%)
Query: 1 MGLLFAFMVMALCATPSALSLRGSAVTVALPPRRLPQNLPNIQPVSPGHPPSILPDHTYS 60
MG+ +VM C +ALS GSA D S
Sbjct: 1 MGMPLVLLVMTQCLAFTALSAHGSA------------------------------DPAVS 30
Query: 61 PIRSPHGSGRKSHGEVLP-PPNKPHHISSTKHYSPTKGAHSHDAMRPSSITPAPSSLSSF 119
P + GRK HG V PPNK HI + +SPT+ H H +R S+I PSSL F
Sbjct: 31 PTSNSLSHGRKKHGTVAAAPPNKEFHILQSMEHSPTEAHHPHHRVRLSNIAVPPSSLP-F 89
Query: 120 RGPTKKWVHGPASSPFIPFHRHHHVRNKSRNSGSGPAYPTPAPSNSQQGPSVPSFQSPLP 179
+ KK VHG ASSP F+RHHH RNK RNS P++ SQQGPSV SF SP+P
Sbjct: 90 KHQAKKHVHGSASSPTTSFYRHHHARNKFRNSAPAPSHLLSPHPYSQQGPSVSSFHSPVP 149
Query: 180 SSSSWSSHAPAPSPKATSGNLNLPSLRPTISPTSSSLKKMKTPPPSSVMTLPPPPPNEDC 239
SS+SW S +PAPSP S +N+ P ++P SSLK MKTPPP V TLPPPPPNEDC
Sbjct: 150 SSTSWGSPSPAPSPAPLSRQINMHFHPPAVAPLGSSLKNMKTPPPPLVWTLPPPPPNEDC 209
Query: 240 GSVTCTEPLTYTPPGSPCGCVWPIQVKLALDVPIYTFFPLVSQLTEEIAASVGLNHSQVR 299
S+TCTEPLTYTPPGSPCGCVWPIQVKL L V +YTFFPLVS+L +EIAA V LNHSQVR
Sbjct: 210 ASLTCTEPLTYTPPGSPCGCVWPIQVKLRLSVALYTFFPLVSELADEIAAGVSLNHSQVR 269
Query: 300 VMGANAASQQLQKSTALINLVPLGVQFDDTVAFLIFKKFWQRQVFIKPSLFGAYEVLYVH 359
+MGANAA+QQL K+ LI+LVPLG +F+ T AF I++KFW ++ FIK SL+G YE LYV
Sbjct: 270 IMGANAANQQLDKTIILIDLVPLGEKFNHTTAFSIYEKFWLKKFFIKTSLYGGYEALYVR 329
Query: 360 YPGLPPSPPSQSSISTEDDGPYAGRDNKRQALKPLGVEVPMRKKGGLRGSMIAAIVLSSF 419
YPGLPPS SSIS DDG Y+G N + +KPLGV+VP ++K GL GSMI IVLSS
Sbjct: 330 YPGLPPS--PPSSISNIDDGSYSGHGNNGRVMKPLGVDVPQKQKHGLGGSMITVIVLSSV 387
Query: 420 TALVLCFGIA-VFLLK-RGAFRQPEQTPHDVICAPAKLSGATTTLRYGSMLSSSSVSIDS 477
T V+C +A V +LK RG Q E PH +I + AK SGA ++ GS SS+SVS S
Sbjct: 388 TGFVICIAVAWVLVLKCRGHVHQAEDIPHSLISSFAKPSGAAGSMMLGSRTSSTSVSFSS 447
Query: 478 CAVTYTGTAKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQH 537
VTYTG+AKTF+LNDIE+AT+ F SR++GEGGFG+VYRGILDDG EVAVKVLKR +Q
Sbjct: 448 GVVTYTGSAKTFSLNDIERATDNFDASRVLGEGGFGLVYRGILDDGVEVAVKVLKRDDQQ 507
Query: 538 GGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLD 597
GGREFLAE+EMLSRLHHRNLVKL G+C E++ RCLVYEL+ NGS+ESHLHG DK PLD
Sbjct: 508 GGREFLAEVEMLSRLHHRNLVKLIGICTEEHTRCLVYELVPNGSVESHLHGVDKEASPLD 567
Query: 598 WDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN 657
W ARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN
Sbjct: 568 WGARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN 627
Query: 658 KHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVA 717
KHIST VMGTFGYLAPEYAMTGHLL PPGQENLVA
Sbjct: 628 KHISTRVMGTFGYLAPEYAMTGHLL--------------------------PPGQENLVA 661
Query: 718 WARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLV 777
WARPLLTTKEGL+TIIDP ++S+ +D+ KVAAIASMCVQPEVSHRPFMGEVVQALKLV
Sbjct: 662 WARPLLTTKEGLETIIDPALKSSSPFDSAAKVAAIASMCVQPEVSHRPFMGEVVQALKLV 721
Query: 778 CNEFDETKETIESRDLSEDCSISVDSKVNRLSGEFVEALEVCHTRSGYGVGHDNSMAISA 837
C+E+DETK+ E+ SI V K +R+ GE +E +V H
Sbjct: 722 CSEYDETKDLASKSFSQENLSIDVIRKSSRVLGELLEVSQVHH----------------- 764
Query: 838 SEMITPMGLEGQESGSFRRHSSSGPLRSEGRRQFWQILKSSSRGSMREHGFSSKFWPES 896
GQ+SGSFRR+SSSGPL + RR+FWQ L+ SS GS EHGFS K WP S
Sbjct: 765 ---------PGQDSGSFRRYSSSGPLSTGRRREFWQRLRRSSGGSASEHGFSFKLWPRS 814
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356522430|ref|XP_003529849.1| PREDICTED: receptor-like serine/threonine-protein kinase ALE2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 965 bits (2494), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/836 (62%), Positives = 614/836 (73%), Gaps = 16/836 (1%)
Query: 57 HTYSPIRSPHGSGRKSHGEVLPPPNKPHHISSTKHYSPTKGAHSHDAMRPSSITPAPSSL 116
H Y+ + H S R +H + PP K SS H S + P+SI +PS
Sbjct: 22 HEYAATKLQHSSDR-NHFSIAIPPTKS---SSEGHSSIAHPPSESSSGVPASIALSPSK- 76
Query: 117 SSFRGPTKKWVHGPASSPFIPFHRHHHVRNKSRNSGSGPAYPTPAPSNSQQGPSVPSFQS 176
S + P W HG SP + H+H+H + KS N P YP APS S QGPSV ++
Sbjct: 77 SIHKAPRIIWTHGSVDSP-VSHHKHYHSKRKSHNPTPAPTYPVQAPSYSHQGPSVFRWKP 135
Query: 177 PLPSSSSWSSHAPAPSPKAT--SGNLNLPSLRPTISPTSSSLKKMKTPPPSSVMTLPPPP 234
P S S HAPAP+P G+L++PS P ISP SSLKK KTPPP+ + LPPPP
Sbjct: 136 PFSSPKSRDVHAPAPAPSPAILPGHLDVPSPSPRISPLGSSLKKKKTPPPAYTLVLPPPP 195
Query: 235 PNEDCGSVTCTEPLTYTPPGSPCGCVWPIQVKLALDVPIYTFFPLVSQLTEEIAASVGLN 294
PN+DC S+TC+EPLTYTPPGSPCGCVWP+QVKL +++ IY FPLVS+L +EIAASV LN
Sbjct: 196 PNKDCLSMTCSEPLTYTPPGSPCGCVWPLQVKLHINIAIYKVFPLVSELAKEIAASVLLN 255
Query: 295 HSQVRVMGANAASQQLQKSTALINLVPLGVQFDDTVAFLIFKKFWQRQVFIKPSLFGAYE 354
HSQVR++GA+AA+QQL+K+T LI+LVP GV+FDDT AFLI+KKFW R++ I S+FGAYE
Sbjct: 256 HSQVRIVGADAANQQLEKTTVLIDLVPKGVKFDDTTAFLIYKKFWHREILIDASVFGAYE 315
Query: 355 VLYVHYPGLPPSPPSQ-SSISTEDDGPYAGRDNKRQALKPLGVEVPMRKKGGLRGSMIAA 413
VLYVHYPGLPPSPPS S DDGP G DN +KPLGV+VP +KK G G MI
Sbjct: 316 VLYVHYPGLPPSPPSTPQDASGIDDGPSPGHDNNGTMMKPLGVDVPKKKKEGNNGRMIVI 375
Query: 414 IVLSSFTALVLCFGIA-VFLLK-RGAFRQPEQTPHDVICAPAKLSGATTTLRYGSMLSSS 471
IVLSS TA V+ G+A + LLK R + E P I +K S A +L G L S
Sbjct: 376 IVLSSVTAFVVFIGLAWLCLLKCRSYVHEHEPVPDGFISPSSKQSRAARSLTQGIRLGSG 435
Query: 472 SVSIDSCAVTYTGTAKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVL 531
S S +S +TYTG+AK FTLND+EKAT+ F +SRI+GEGGFG+VY+GIL+DGR+VAVK+L
Sbjct: 436 SQSFNSGTITYTGSAKIFTLNDLEKATDNFDSSRILGEGGFGLVYKGILNDGRDVAVKIL 495
Query: 532 KRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDK 591
KR +Q GGREFLAE+EMLSRLHHRNLVKL G+CIE RCLVYEL+ NGS+ESHLHG DK
Sbjct: 496 KRDDQRGGREFLAEVEMLSRLHHRNLVKLLGICIEKQTRCLVYELVPNGSVESHLHGTDK 555
Query: 592 VNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLART 651
N PLDW++RMKIALGAARGLAYLHEDS+P VIHRDFK+SNILLE+DFTPKVSDFGLART
Sbjct: 556 ENDPLDWNSRMKIALGAARGLAYLHEDSNPCVIHRDFKASNILLEYDFTPKVSDFGLART 615
Query: 652 ALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPG 711
ALDE NKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPG
Sbjct: 616 ALDERNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPG 675
Query: 712 QENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVV 771
QENLV W RPLLT+KEGL+ I+DP ++ NIS D +VKVAAIASMCVQPEVS RPFMGEVV
Sbjct: 676 QENLVTWVRPLLTSKEGLQMIVDPFVKPNISVDIVVKVAAIASMCVQPEVSQRPFMGEVV 735
Query: 772 QALKLVCNEFDETKETIESRDLSEDCSISVDSKVNRLSGEFVEALEVCHTRSGYGVGHDN 831
QALKLVC++F+ET + I S+ E V+ K + S E VE E T SGY G +
Sbjct: 736 QALKLVCSDFEET-DFIRSKSSQEGLLTDVEGKYSEASVERVEFSEYQKTLSGYQSGEEK 794
Query: 832 SMAISASEMITPMGLEGQESGSFRRHSSSGPLRSEGRRQFWQILKSSSRGSMREHG 887
+ +SA+E+++ GQE SFRR+S SGPL +RQFWQ L+S SRGS EHG
Sbjct: 795 -VRLSATELLS---TSGQEFESFRRYSRSGPLTIGKKRQFWQKLRSLSRGSSSEHG 846
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|351725445|ref|NP_001235301.1| protein kinase family protein [Glycine max] gi|223452462|gb|ACM89558.1| protein kinase family protein [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 909 bits (2350), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/813 (61%), Positives = 592/813 (72%), Gaps = 33/813 (4%)
Query: 100 SHDAMRPSSITPAPSSLSS----FRGPTKKWVHGPASSPFIPFHRHHHVRNKSRNSG--S 153
+H SS PA +LS+ + PT W H SP + H+HH + K N +
Sbjct: 80 AHPPSESSSGVPASIALSASKSIHKAPTIIWTHSSVDSPIL-HHKHHFSKRKFSNPTPVA 138
Query: 154 GPAYPTPAPSNSQQGPSVPSFQSPLPSSSSWSSHAPAPSPKATSGNLNLPSLRPTISPTS 213
P YP AP+ S QGPSV Q P S + HAPA +P + L +PS P ISP
Sbjct: 139 APTYPVQAPTYSHQGPSVFESQPPFSSPNIKDIHAPATAP--SPAILPVPSPSPRISPLG 196
Query: 214 SSLKKMKTPPPSSVMTLPPPPPNEDCGSVTCTEPLTYTPPGSPCGCVWPIQVKLALDVPI 273
SSLKK KTP P+ + LPPPPPN+DC S TC EPLTYTPPGSPCGCVWP+QVKL +++ I
Sbjct: 197 SSLKKKKTPSPAYTLILPPPPPNKDCLSTTCLEPLTYTPPGSPCGCVWPLQVKLHINIAI 256
Query: 274 YTFFPLVSQLTEEIAASVGLNHSQVRVMGANAASQQLQKSTALINLVPLGVQFDDTVAFL 333
Y FFPLVS+L +EIAASV LNH+QVR++GA+AA+QQL+K+T LI+LVP GV+FDDT AFL
Sbjct: 257 YKFFPLVSELAKEIAASVLLNHTQVRIVGADAANQQLEKTTVLIDLVPKGVKFDDTTAFL 316
Query: 334 IFKKFWQRQVFIKPSLFGAYEVLYVHYPGLPPSPPSQSSISTE-DDGPYAGRDNKRQALK 392
I+KKFW R++ I S+FGAYEVLYVH PGLPPSPPS S ++ DDGP G DN +K
Sbjct: 317 IYKKFWYREILIDASVFGAYEVLYVHSPGLPPSPPSTPSDASGIDDGPNPGHDNNGTIMK 376
Query: 393 PLGVEVPMRKKGGLRGSMIAAIVLSSFTALVLCFGIA-VFLLK-RGAFRQPEQTPHDVIC 450
PLGV+VP +KK G G MI IVLSS TA V+ G+A + LLK R + + P I
Sbjct: 377 PLGVDVPKKKKEGNNGRMIVIIVLSSVTASVVFIGLAWLCLLKCRTYVHEHKPVPDGFIS 436
Query: 451 APAKLSG----------------ATTTLRYGSMLSSSSVSIDSCAVTYTGTAKTFTLNDI 494
+ +K S A +L G L S S S +S +TYTG+AK FTLND+
Sbjct: 437 SSSKQSNNFIAYKFPLIKRLLPRAARSLTQGIRLGSGSQSFNSGTITYTGSAKIFTLNDL 496
Query: 495 EKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHH 554
EKATN F +SRI+GEGGFG+VY+GIL+DGR+VAVK+LKR +Q GGREFLAE+EMLSRLHH
Sbjct: 497 EKATNNFDSSRILGEGGFGLVYKGILNDGRDVAVKILKRDDQRGGREFLAEVEMLSRLHH 556
Query: 555 RNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAY 614
RNLVKL G+C E RCLVYEL+ NGS+ESHLH DKV PLDW++RMKIALGAARGLAY
Sbjct: 557 RNLVKLLGICTEKQTRCLVYELVPNGSVESHLHVADKVTDPLDWNSRMKIALGAARGLAY 616
Query: 615 LHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPE 674
LHEDS+P VIHRDFK+SNILLE+DFTPKVSDFGLARTALDE NKHISTHVMGTFGYLAPE
Sbjct: 617 LHEDSNPCVIHRDFKASNILLEYDFTPKVSDFGLARTALDERNKHISTHVMGTFGYLAPE 676
Query: 675 YAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIID 734
YAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLV W RPLLT+KEGL+ IID
Sbjct: 677 YAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVTWVRPLLTSKEGLQMIID 736
Query: 735 PVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNEFDETKETIESRDLS 794
P ++ NIS DT+VKVAAIASMCVQPEVS RPFMGEVVQALKLVC+EF+ET + I+S+
Sbjct: 737 PYVKPNISVDTVVKVAAIASMCVQPEVSQRPFMGEVVQALKLVCSEFEET-DFIKSKGSQ 795
Query: 795 EDCSISVDSKVNRLSGEFVEALEVCHTRSGYGVGHDNSMAISASEMITPMGLEGQESGSF 854
E V + SGE VE E T SGY ++ + +SASE+++ GQE SF
Sbjct: 796 EGLLTDVKGIFSEASGERVEFSECQKTFSGYQ-SNEEKVRLSASELLS---TSGQEFESF 851
Query: 855 RRHSSSGPLRSEGRRQFWQILKSSSRGSMREHG 887
R++S SGPL +RQFWQ L+S SRGS EHG
Sbjct: 852 RQYSRSGPLIIGKKRQFWQKLRSLSRGSSSEHG 884
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147856502|emb|CAN78643.1| hypothetical protein VITISV_031742 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/900 (54%), Positives = 570/900 (63%), Gaps = 133/900 (14%)
Query: 1 MGLLFAFMVMALCATPSALSLRGSAVTVALPPRRLPQNLPNIQPVSPGHPPSILPDHTYS 60
MG+ +VM C +ALS GSA D S
Sbjct: 1 MGMPLVLLVMTQCLAFTALSAHGSA------------------------------DPAVS 30
Query: 61 PIRSPHGSGRKSHGEV-LPPPNKPHHISSTKHYSPTKGAHSHDAMRPSSITPAPSSLSSF 119
P + GRK HG V PPNK HI + +SPT+ H H +R S+I PSSL F
Sbjct: 31 PTSNSLSHGRKKHGTVAAAPPNKEFHILQSMEHSPTEAHHPHHRVRLSNIAVPPSSL-PF 89
Query: 120 RGPTKKWVHGPASSPFIPFHRHHHVRNKSRNSGSGPAYPTPAPSNSQQGPSVPSFQSPLP 179
+ KK VHG ASSP F+RHHH RNK RNS P++ SQQ + + + +
Sbjct: 90 KHQAKKHVHGSASSPTTSFYRHHHARNKFRNSAPAPSHLLSPHPYSQQ-VIINKYHAVIM 148
Query: 180 SSSSWSSHAPAPSPKATSGNLNLPSLRPTISPTSSSLKKMKTPPPSSVMTLPPPPPNEDC 239
P P ++P SSLK MKTPPP V TLPPPPPNEDC
Sbjct: 149 FCVCKVHFHP-----------------PAVAPLGSSLKNMKTPPPPLVWTLPPPPPNEDC 191
Query: 240 GSVTCTEPLTYTPPGSPCGCVWPIQVKLALDVPIYTFFPLVSQLTEEIAASVGLNHSQVR 299
S+TCTEPLTYTPPGSPCGCVWPIQVKL L V +YTFFPLVS+L +EIAA V LNHSQVR
Sbjct: 192 ASLTCTEPLTYTPPGSPCGCVWPIQVKLRLSVALYTFFPLVSELADEIAAGVSLNHSQVR 251
Query: 300 VMGANAASQQLQKSTALINLVPLGVQFDDTVAFLIFKKFWQRQVFIKPSLFGAYEVLYVH 359
+MGANAA+QQL K+ LI+LVPLG +F+ T AF I++KFW ++ FIK SL+G YE LYV
Sbjct: 252 IMGANAANQQLDKTIILIDLVPLGEKFNHTTAFSIYEKFWLKKFFIKTSLYGGYEALYVR 311
Query: 360 YPGLPPSPPSQSSISTEDDGPYAGRDNKRQALKPLGVEVPMRKKGGLRGSMIAAIVLSSF 419
YPGL P SSIS DDG Y+G N + +KPLGV+VP ++K GL GSMI IVLSS
Sbjct: 312 YPGL--PPSPPSSISNIDDGSYSGHGNNGRVMKPLGVDVPQKQKHGLGGSMITVIVLSSV 369
Query: 420 TALVLCFGIA-VFLLK-RGAFRQPEQTPHDVICAPAKLSGATTTLRYGSMLSSSSVSIDS 477
T V+C +A V +LK RG Q E PH +I + AK S
Sbjct: 370 TGFVICIAVAWVLVLKCRGHVHQAEDIPHSLISSFAKPS--------------------- 408
Query: 478 CAVTYTGTAKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQH 537
E+AT+ F SR++GEGGFG+VYRGILDDG EVAVKVLKR +Q
Sbjct: 409 -----------------ERATDNFDASRVLGEGGFGLVYRGILDDGVEVAVKVLKRDDQQ 451
Query: 538 GGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLD 597
GGREFLAE+EMLSRLHHRNLVKL G+C E++ RCLVYEL+ NGS+ESHLHG DK PLD
Sbjct: 452 GGREFLAEVEMLSRLHHRNLVKLIGICTEEHTRCLVYELVPNGSVESHLHGVDKEASPLD 511
Query: 598 WDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN 657
W ARMKIALGAARGLAYLHEDSSPRVIHRDF
Sbjct: 512 WGARMKIALGAARGLAYLHEDSSPRVIHRDFN---------------------------- 543
Query: 658 KHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVA 717
YLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVA
Sbjct: 544 ------------YLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVA 591
Query: 718 WARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLV 777
WARPLLTTKEGL+TIIDP ++S+ +D+ KVAAIASMCVQPEVSHRPFMGEVVQALKLV
Sbjct: 592 WARPLLTTKEGLETIIDPALKSSSPFDSAAKVAAIASMCVQPEVSHRPFMGEVVQALKLV 651
Query: 778 CNEFDETKETIESRDLSEDCSISVDSKVNRLSGEFVEALEVCHTRSGYGVGHDNSMAISA 837
C+E+DETK+ E+ SI V K +R+ GE +E +V H +G+ D MA+S
Sbjct: 652 CSEYDETKDLASKSFSQENLSIDVIRKSSRVLGELLEVSQVHHPVAGHDSSFDTKMALSV 711
Query: 838 SEMI-TPMGLEGQESGSFRRHSSSGPLRSEGRRQFWQILKSSSRGSMREHGFSSKFWPES 896
S+++ T MG EGQ+SGSFRR+SSSGPL + RR+FWQ L+ SS GS EHGFS K WP S
Sbjct: 712 SDLVSTSMGFEGQDSGSFRRYSSSGPLSTGRRREFWQRLRRSSGGSASEHGFSFKLWPRS 771
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359484309|ref|XP_003633096.1| PREDICTED: receptor-like serine/threonine-protein kinase ALE2-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/939 (54%), Positives = 618/939 (65%), Gaps = 88/939 (9%)
Query: 31 PPRRLPQNLPNIQP--VSPGH-PPS----------------ILPDHTYSPIRSP--HGSG 69
P R+ PQN P++ P V PG PPS I PD +PI +P
Sbjct: 70 PQRKWPQNPPSMHPHPVMPGLLPPSAHNRNKPDNKAPISTPIAPDPDVTPISTPPLASHW 129
Query: 70 RKSHGEVLPPPNKPHHISSTKHYSPTKGAHSHDAMRPSSITPAPSSLSSFRGPTKKWVHG 129
R+ V PPN+ S ++SP K H+AMR S+ AP+SLS+ + PT K
Sbjct: 130 RRKQMPVAAPPNRTPDPLSPVNHSPAKAPSIHNAMRHSN---APASLSTPQSPTNKGSQS 186
Query: 130 PASSPFIPFHRHHHVRNKSRNSGSGPAYPTPAPSNSQQGPSVPSFQSPLPS-------SS 182
PASSP + F +HH RNK +Y P PS QGP + SP PS +
Sbjct: 187 PASSPSMSFSKHHRGRNKITGPAPASSYLIPPPSPRHQGPVI----SPAPSHPPKSLPNR 242
Query: 183 SWSSHAPAPSPKATS--------------------------------GNLNLPSLRPTIS 210
+ + HAP P + L +P L P IS
Sbjct: 243 TRTHHAPLPLNPGSRISPAHSPSPSSLTYPSPAPSPSPTLIYCHVCICTLQVPFLSPKIS 302
Query: 211 PTSSSLKKMKTPPPSSVMTLPPPPP-------NEDCGSVTCTEPLTYTPPGSPCGCVWPI 263
P+ PPSS M PPP N+DC ++ CTEP T TPPGSPCGCV P+
Sbjct: 303 PSRL--------PPSSKMPAPPPVQALPPPPPNQDCSAIVCTEPNTNTPPGSPCGCVLPM 354
Query: 264 QVKLALDVPIYTFFPLVSQLTEEIAASVGLNHSQVRVMGANAASQQLQKSTALINLVPLG 323
QV+L L+V +YTFFPLVS+L EEIAA V + SQVR+MGANAAS + +K+ LI+LVPLG
Sbjct: 355 QVQLRLNVALYTFFPLVSELAEEIAAGVFMRQSQVRIMGANAASPEAEKTIVLIDLVPLG 414
Query: 324 VQFDDTVAFLIFKKFWQRQVFIKPSLFGAYEVLYVHYPGLPPSPPSQSS-ISTEDDGPYA 382
+FD+T AFL +++FW +QV IK FG YEV+YV+YPGLPPSPPS S I+ D+GPY+
Sbjct: 415 EKFDNTTAFLTYQRFWGKQVVIKNLFFGDYEVIYVNYPGLPPSPPSAPSSITMIDNGPYS 474
Query: 383 GRDNKRQALKPLGVEV-PMRKKGGLRGSMIAAIVLSSFTALVLCFGIA-VFLLKR-GAFR 439
G+ N + + PLGV+V R K GL GS+IA IVLS+ A+VLC +A VFL K+
Sbjct: 475 GQGNNGRTIHPLGVDVHKNRHKHGLSGSVIAIIVLSASVAVVLCSAVAWVFLFKKTDCIG 534
Query: 440 QPEQTPHDVICAPAKLSGATTTLRYGSMLSSSSVSIDSCAVTYTGTAKTFTLNDIEKATN 499
QP T ++ + A+ GA ++ GS SS+S+S S TYTG+AKTF+ DIE+AT+
Sbjct: 535 QPVPTQAALVPSLARPPGAAGSV-VGSAPSSASLSFGSSIATYTGSAKTFSAADIERATD 593
Query: 500 GFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVK 559
F SRI+GEGGFG VY G+L+DG +VAVKVLKR + GGREFLAE+EMLSRLHHRNLVK
Sbjct: 594 NFDDSRILGEGGFGRVYSGVLEDGTKVAVKVLKRDDHQGGREFLAEVEMLSRLHHRNLVK 653
Query: 560 LFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDS 619
L G+C E+ RCLVYELI NGS+ESHLHG DK PLDW AR+K+ALGAARGLAYLHEDS
Sbjct: 654 LIGICTEERTRCLVYELIPNGSVESHLHGADKETAPLDWGARIKVALGAARGLAYLHEDS 713
Query: 620 SPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTG 679
SPRVIHRDFKSSNILLEHDFTPKVSDFGLARTA+DE N+HIST VMGTFGY+APEYAMTG
Sbjct: 714 SPRVIHRDFKSSNILLEHDFTPKVSDFGLARTAMDEENRHISTRVMGTFGYVAPEYAMTG 773
Query: 680 HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIES 739
HLLVKSDVYSYGVVLLELLTGRKPVD+SQPPGQENLVAWARPLLT+KEGL+T+ID + S
Sbjct: 774 HLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGQENLVAWARPLLTSKEGLQTMIDLSLGS 833
Query: 740 NISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNEFDETKETIESRDLSEDCSI 799
++ +D++ KVAAIASMCVQPEVSHRPFMGEVVQALKLVCNE DETKE ED S+
Sbjct: 834 DVPFDSVAKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNECDETKEAGSKSGSQEDLSL 893
Query: 800 SVDSKVNRLSGEFVEALEVCHTRSGYGVGHDNSMAISASEMITPMGLEG-QESGSFRRHS 858
+D+ V+ SG+ + S YG G D +S SE+ + G Q SGSFRR+S
Sbjct: 894 DLDTGVSSASGQLPDPSHAHFPVSTYGSGLDAETGLSVSELFSTSARFGRQPSGSFRRYS 953
Query: 859 SSGPLRSEGRRQFWQILKSSSRGSMREHGFSSKFWPESH 897
SSGPLR+ R FWQ ++ +S GS+ EHG + P SH
Sbjct: 954 SSGPLRTGRARHFWQRMRRNSGGSVSEHGIMFRLRPGSH 992
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 897 | ||||||
| TAIR|locus:504954886 | 1113 | AT5G56890 [Arabidopsis thalian | 0.714 | 0.575 | 0.584 | 1.2e-199 | |
| TAIR|locus:2038992 | 744 | ALE2 "Abnormal Leaf Shape 2" [ | 0.694 | 0.837 | 0.491 | 7.9e-149 | |
| TAIR|locus:2132168 | 725 | AT4G02010 [Arabidopsis thalian | 0.333 | 0.412 | 0.594 | 9.7e-99 | |
| TAIR|locus:2026846 | 710 | PERK13 "proline-rich extensin- | 0.321 | 0.405 | 0.515 | 1.3e-85 | |
| TAIR|locus:2026925 | 708 | PERK9 "proline-rich extensin-l | 0.405 | 0.514 | 0.475 | 1.7e-84 | |
| TAIR|locus:2019938 | 718 | PERK11 "proline-rich extensin- | 0.319 | 0.399 | 0.530 | 5.1e-83 | |
| TAIR|locus:2099009 | 400 | AT3G58690 [Arabidopsis thalian | 0.340 | 0.762 | 0.522 | 1.8e-80 | |
| TAIR|locus:2028756 | 762 | PERK10 "proline-rich extensin- | 0.322 | 0.379 | 0.528 | 5.8e-80 | |
| TAIR|locus:2159873 | 681 | PERK8 "proline-rich extensin-l | 0.316 | 0.417 | 0.517 | 9.5e-80 | |
| UNIPROTKB|Q9ARH1 | 647 | Q9ARH1 "Receptor protein kinas | 0.322 | 0.446 | 0.5 | 1.4e-78 |
| TAIR|locus:504954886 AT5G56890 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1855 (658.1 bits), Expect = 1.2e-199, Sum P(2) = 1.2e-199
Identities = 385/659 (58%), Positives = 458/659 (69%)
Query: 236 NEDCGSVTCTEPLTYTPPGSPCGCVWPIQVKLALDVPIYTFFPLVSQLTEEIAASVGLNH 295
N DC S C EP T TPPGSPCGCVWPIQV+L L + +Y FFP+VS+ EI+A V +
Sbjct: 455 NSDCSSTICLEPYTNTPPGSPCGCVWPIQVELRLSMALYDFFPMVSEFAREISAGVFMKQ 514
Query: 296 SQVRVMGANAASQQLQKSTALINLVPLGVQFDDTVAFLIFKKFWQRQVFIKPSLFGAYEV 355
SQVR+MGANAAS+Q +KS LI+LVPLG +FD+ A L +++FW ++V+I +FG Y+V
Sbjct: 515 SQVRIMGANAASEQPEKSIVLIDLVPLGDKFDNMTAMLTYQRFWSKKVYIDEPIFGGYDV 574
Query: 356 LYVHYXXXXXXXXXXXXXXTEDDGPYAGRDNKRQALKPLGVEVPMR-KKGGLRGSMIAAI 414
+YV Y D GPY+G +N R A+KPLGV+VP + +K L G IA I
Sbjct: 575 IYVRYPGLPASPPTSGMTII-DQGPYSGNNNGR-AVKPLGVDVPRKPRKKELNGGSIAVI 632
Query: 415 VLSSFTALVLCFGIAVFLL---KRGAFRQPEQTPHDVICAPA--KLSGATTTLRYGXXXX 469
VLS+ + LCF I FL+ +R R ++TP P+ K SG+ +L G
Sbjct: 633 VLSAAAFIGLCFVIVWFLVFRRQRDRRRLSKRTPLARPSLPSLSKPSGSARSLT-GSRFS 691
Query: 470 XXXXXXXXCAVTYTGTAKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVK 529
+T +AKTFT ++I KATN F SR++GEGGFG VY G+ DDG +VAVK
Sbjct: 692 STSLSFESSIAPFTLSAKTFTASEIMKATNNFDESRVLGEGGFGRVYEGVFDDGTKVAVK 751
Query: 530 VLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGD 589
VLKR +Q G REFLAE+EMLSRLHHRNLV L G+CIED NR LVYELI NGS+ESHLHG
Sbjct: 752 VLKRDDQQGSREFLAEVEMLSRLHHRNLVNLIGICIEDRNRSLVYELIPNGSVESHLHGI 811
Query: 590 DKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLA 649
DK + PLDWDAR+KIALGAARGLAYLHEDSSPRVIHRDFKSSNILLE+DFTPKVSDFGLA
Sbjct: 812 DKASSPLDWDARLKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLENDFTPKVSDFGLA 871
Query: 650 RTALD-EGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQ 708
R ALD E N+HIST VMGTFGY+APEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD+SQ
Sbjct: 872 RNALDDEDNRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQ 931
Query: 709 PPGQENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMG 768
PPGQENLV+W RP LT+ EGL IID + IS+D++ KVAAIASMCVQPEVSHRPFMG
Sbjct: 932 PPGQENLVSWTRPFLTSAEGLAAIIDQSLGPEISFDSIAKVAAIASMCVQPEVSHRPFMG 991
Query: 769 EVVQALKLVCNEFDETKETIESRDLSEDCSISVDSKVNRLSGEFVEALEVCHTRSGYGVG 828
EVVQALKLV NE DE KE +S+D D++ G+ + Y
Sbjct: 992 EVVQALKLVSNECDEAKELNSLTSISKD-DFRDDTQAESSCGDSSARMARYPLLPNYDSE 1050
Query: 829 HDNSMAISASEMITPMGLEGQESGSFRRHSSSGPLRSEGRRQFWQILKSSSRGSMREHG 887
D +S SEM T G SG F R S+SGPL S + FWQ ++ S GS+ EHG
Sbjct: 1051 PDTERGLSTSEMYT--G-----SGRFERQSNSGPLTSGRGKSFWQKMRRLSTGSLSEHG 1102
|
|
| TAIR|locus:2038992 ALE2 "Abnormal Leaf Shape 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1453 (516.5 bits), Expect = 7.9e-149, P = 7.9e-149
Identities = 326/663 (49%), Positives = 418/663 (63%)
Query: 236 NEDCGSVTCTEPLTYTPPGSPCGCVWPIQVKLALDVPIYTFFPLVSQLTEEIAASVGLNH 295
+ DC TC EPLT TP GSPCGCV+P++V+L L V ++ FP+ ++L E+AA L
Sbjct: 95 SHDCQQ-TCVEPLTSTPFGSPCGCVFPMKVQLLLSVAPFSIFPVTNELEIEVAAGTYLEQ 153
Query: 296 SQVRVMGANAASQQLQKSTALINLVPLGVQFDDTVAFLIFKKFWQRQVFIKPSLFGAYEV 355
SQV++MGA+A S+ K+ INLVPLG +FD+T A LI+++F ++V + ++FG YEV
Sbjct: 154 SQVKIMGASADSENQGKTVVDINLVPLGEKFDNTTATLIYQRFRHKKVPLNETVFGDYEV 213
Query: 356 LYVHYXXXXXXXXXXXXXXTEDDGPYAGRDNKRQALKPLGVEVPMRKKGGLRGSMIAAIV 415
++ Y + +G G D P+ K G+ IA I
Sbjct: 214 THISYPGIPS---------SSPNGDVTG-DAPGGLPIPINATTFANKSQGIGFRTIAIIA 263
Query: 416 LSSFTALVLCFGIAVFLLKRGAFRQPEQTPHDVICAPA--KLSGATTTLRYGXXXXXXXX 473
LS F +++ G ++K + + AP+ K GA +
Sbjct: 264 LSGFVLILVLVGAISIIVKWKKIGKSSNAVGPAL-APSINKRPGAGSMFSSSARSSGSDS 322
Query: 474 XXXXCAVTYTGTAKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKR 533
A T + KTFTL+++EKAT+ F R++GEGGFG VY+G ++DG EVAVK+L R
Sbjct: 323 LMSSMA-TCALSVKTFTLSELEKATDRFSAKRVLGEGGFGRVYQGSMEDGTEVAVKLLTR 381
Query: 534 ANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVN 593
NQ+ REF+AE+EMLSRLHHRNLVKL G+CIE RCL+YEL+HNGS+ESHLH
Sbjct: 382 DNQNRDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLIYELVHNGSVESHLH-----E 436
Query: 594 GPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTAL 653
G LDWDAR+KIALGAARGLAYLHEDS+PRVIHRDFK+SN+LLE DFTPKVSDFGLAR A
Sbjct: 437 GTLDWDARLKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREAT 496
Query: 654 DEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQE 713
EG++HIST VMGTFGY+APEYAMTGHLLVKSDVYSYGVVLLELLTGR+PVD+SQP G+E
Sbjct: 497 -EGSQHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRRPVDMSQPSGEE 555
Query: 714 NLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773
NLV WARPLL +EGL+ ++DP + ++D + KVAAIASMCV EVSHRPFMGEVVQA
Sbjct: 556 NLVTWARPLLANREGLEQLVDPALAGTYNFDDMAKVAAIASMCVHQEVSHRPFMGEVVQA 615
Query: 774 LKLVCNEFDETKETIESRDLSEDCSI--SVDSKVNRLSGEFVEALEVCHTRSGYGVGHDN 831
LKL+ N+ DET S+ +D S+ S D K + + + R YG
Sbjct: 616 LKLIYNDADETCGDYCSQ---KDSSVPDSADFKGDLAPSD--SSWWNLTPRLRYGQASSF 670
Query: 832 SMAISASEMITPMGLEGQESGSFRR------HSSSGPLRS-EGRRQFWQILKSSSRGSMR 884
+S + M + S R + SGPLR RR F+++ RGSM
Sbjct: 671 ITMDYSSGPLEDMENRPHSASSIPRVGGLILPNRSGPLRPMRSRRNFFRL-----RGSMS 725
Query: 885 EHG 887
EHG
Sbjct: 726 EHG 728
|
|
| TAIR|locus:2132168 AT4G02010 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 920 (328.9 bits), Expect = 9.7e-99, Sum P(2) = 9.7e-99
Identities = 179/301 (59%), Positives = 223/301 (74%)
Query: 479 AVTYTGTAKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHG 538
++ + + + + ++++AT+ F ++ I+GEGGFG VYRGIL DG VA+K L G
Sbjct: 358 SLPHPASTRFLSYEELKEATSNFESASILGEGGFGKVYRGILADGTAVAIKKLTSGGPQG 417
Query: 539 GREFLAELEMLSRLHHRNLVKLFGVCI--EDNNRCLVYELIHNGSLESHLHGDDKVNGPL 596
+EF E++MLSRLHHRNLVKL G + + L YEL+ NGSLE+ LHG +N PL
Sbjct: 418 DKEFQVEIDMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLEAWLHGPLGLNCPL 477
Query: 597 DWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656
DWD RMKIAL AARGLAYLHEDS P VIHRDFK+SNILLE++F KV+DFGLA+ A +
Sbjct: 478 DWDTRMKIALDAARGLAYLHEDSQPSVIHRDFKASNILLENNFNAKVADFGLAKQAPEGR 537
Query: 657 NKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLV 716
H+ST VMGTFGY+APEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD+SQP GQENLV
Sbjct: 538 GNHLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLV 597
Query: 717 AWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKL 776
W RP+L K+ L+ ++D +E + ++V IA+ CV PE S RP MGEVVQ+LK+
Sbjct: 598 TWTRPVLRDKDRLEELVDSRLEGKYPKEDFIRVCTIAAACVAPEASQRPTMGEVVQSLKM 657
Query: 777 V 777
V
Sbjct: 658 V 658
|
|
| TAIR|locus:2026846 PERK13 "proline-rich extensin-like receptor kinase 13" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 744 (267.0 bits), Expect = 1.3e-85, Sum P(4) = 1.3e-85
Identities = 152/295 (51%), Positives = 205/295 (69%)
Query: 484 GTAKT-FTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREF 542
G+ +T FT ++ T GF I+GEGGFG VY+G L+DG+ VAVK LK + G REF
Sbjct: 335 GSGQTHFTYEELTDITEGFSKHNILGEGGFGCVYKGKLNDGKLVAVKQLKVGSGQGDREF 394
Query: 543 LAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARM 602
AE+E++SR+HHR+LV L G CI D+ R L+YE + N +LE HLHG K L+W R+
Sbjct: 395 KAEVEIISRVHHRHLVSLVGYCIADSERLLIYEYVPNQTLEHHLHG--KGRPVLEWARRV 452
Query: 603 KIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIST 662
+IA+G+A+GLAYLHED P++IHRD KS+NILL+ +F +V+DFGLA+ D H+ST
Sbjct: 453 RIAIGSAKGLAYLHEDCHPKIIHRDIKSANILLDDEFEAQVADFGLAKLN-DSTQTHVST 511
Query: 663 HVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPL 722
VMGTFGYLAPEYA +G L +SDV+S+GVVLLEL+TGRKPVD QP G+E+LV WARPL
Sbjct: 512 RVMGTFGYLAPEYAQSGKLTDRSDVFSFGVVLLELITGRKPVDQYQPLGEESLVEWARPL 571
Query: 723 L--TTKEG-LKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL 774
L + G ++D +E + + + ++ A+ CV+ RP M +VV+AL
Sbjct: 572 LHKAIETGDFSELVDRRLEKHYVENEVFRMIETAAACVRHSGPKRPRMVQVVRAL 626
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| TAIR|locus:2026925 PERK9 "proline-rich extensin-like receptor kinase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 809 (289.8 bits), Expect = 1.7e-84, Sum P(2) = 1.7e-84
Identities = 181/381 (47%), Positives = 236/381 (61%)
Query: 412 AAIVLSSFTALVL--CFGIAVFLLKRGAFRQPEQTPHDVICAPAKLSGATTTLRYGXXXX 469
A + +S ALV+ FGI V+ L++ R + DV +P S A + +
Sbjct: 280 AVVGISVAVALVVFTLFGIFVWCLRKREKRLSAVSGGDVTPSPMS-STARSDSAFFRMQS 338
Query: 470 XXXXXXXXCAVTYT------GTAKT-FTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDD 522
+ +Y G +K F+ ++ KATNGF ++GEGGFG VY+GIL D
Sbjct: 339 SAPVGASKRSGSYQSQSGGLGNSKALFSYEELVKATNGFSQENLLGEGGFGCVYKGILPD 398
Query: 523 GREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSL 582
GR VAVK LK G REF AE+E LSR+HHR+LV + G CI + R L+Y+ + N L
Sbjct: 399 GRVVAVKQLKIGGGQGDREFKAEVETLSRIHHRHLVSIVGHCISGDRRLLIYDYVSNNDL 458
Query: 583 ESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPK 642
HLHG+ V LDW R+KIA GAARGLAYLHED PR+IHRD KSSNILLE +F +
Sbjct: 459 YFHLHGEKSV---LDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLEDNFDAR 515
Query: 643 VSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRK 702
VSDFGLAR ALD N HI+T V+GTFGY+APEYA +G L KSDV+S+GVVLLEL+TGRK
Sbjct: 516 VSDFGLARLALD-CNTHITTRVIGTFGYMAPEYASSGKLTEKSDVFSFGVVLLELITGRK 574
Query: 703 PVDLSQPPGQENLVAWARPLLT---TKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQP 759
PVD SQP G E+LV WARPL++ E ++ DP + N + ++ A CV+
Sbjct: 575 PVDTSQPLGDESLVEWARPLISHAIETEEFDSLADPKLGGNYVESEMFRMIEAAGACVRH 634
Query: 760 EVSHRPFMGEVVQALKLVCNE 780
+ RP MG++V+A + + E
Sbjct: 635 LATKRPRMGQIVRAFESLAAE 655
|
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| TAIR|locus:2019938 PERK11 "proline-rich extensin-like receptor kinase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 778 (278.9 bits), Expect = 5.1e-83, Sum P(3) = 5.1e-83
Identities = 157/296 (53%), Positives = 209/296 (70%)
Query: 484 GTAKT-FTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREF 542
GT+K FT ++ + T GF S ++GEGGFG VY+GIL +G+ VA+K LK + G REF
Sbjct: 352 GTSKIHFTYEELSQITEGFCKSFVVGEGGFGCVYKGILFEGKPVAIKQLKSVSAEGYREF 411
Query: 543 LAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGP-LDWDAR 601
AE+E++SR+HHR+LV L G CI + +R L+YE + N +L+ HLHG N P L+W R
Sbjct: 412 KAEVEIISRVHHRHLVSLVGYCISEQHRFLIYEFVPNNTLDYHLHGK---NLPVLEWSRR 468
Query: 602 MKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIS 661
++IA+GAA+GLAYLHED P++IHRD KSSNILL+ +F +V+DFGLAR D HIS
Sbjct: 469 VRIAIGAAKGLAYLHEDCHPKIIHRDIKSSNILLDDEFEAQVADFGLARLN-DTAQSHIS 527
Query: 662 THVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARP 721
T VMGTFGYLAPEYA +G L +SDV+S+GVVLLEL+TGRKPVD SQP G+E+LV WARP
Sbjct: 528 TRVMGTFGYLAPEYASSGKLTDRSDVFSFGVVLLELITGRKPVDTSQPLGEESLVEWARP 587
Query: 722 LLTT---KEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL 774
L K + ++DP +E++ + K+ A+ CV+ RP M +VV+AL
Sbjct: 588 RLIEAIEKGDISEVVDPRLENDYVESEVYKMIETAASCVRHSALKRPRMVQVVRAL 643
|
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| TAIR|locus:2099009 AT3G58690 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 808 (289.5 bits), Expect = 1.8e-80, P = 1.8e-80
Identities = 162/310 (52%), Positives = 215/310 (69%)
Query: 480 VTYTGTAKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGG 539
VT G + FT + AT GF S ++G GGFG+VYRG+L+DGR+VA+K++ A + G
Sbjct: 67 VTENGL-QIFTFKQLHSATGGFSKSNVVGNGGFGLVYRGVLNDGRKVAIKLMDHAGKQGE 125
Query: 540 REFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNG-P--L 596
EF E+E+LSRL L+ L G C +++++ LVYE + NG L+ HL+ ++ P L
Sbjct: 126 EEFKMEVELLSRLRSPYLLALLGYCSDNSHKLLVYEFMANGGLQEHLYLPNRSGSVPPRL 185
Query: 597 DWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656
DW+ RM+IA+ AA+GL YLHE SP VIHRDFKSSNILL+ +F KVSDFGLA+ D+
Sbjct: 186 DWETRMRIAVEAAKGLEYLHEQVSPPVIHRDFKSSNILLDRNFNAKVSDFGLAKVGSDKA 245
Query: 657 NKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLV 716
H+ST V+GT GY+APEYA+TGHL KSDVYSYGVVLLELLTGR PVD+ + G+ LV
Sbjct: 246 GGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRATGEGVLV 305
Query: 717 AWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL-K 775
+WA P L ++ + I+DP +E S +V+VAAIA+MCVQ E +RP M +VVQ+L
Sbjct: 306 SWALPQLADRDKVVDIMDPTLEGQYSTKEVVQVAAIAAMCVQAEADYRPLMADVVQSLVP 365
Query: 776 LVCNEFDETK 785
LV N +K
Sbjct: 366 LVRNRRSASK 375
|
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| TAIR|locus:2028756 PERK10 "proline-rich extensin-like receptor kinase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 769 (275.8 bits), Expect = 5.8e-80, Sum P(2) = 5.8e-80
Identities = 156/295 (52%), Positives = 199/295 (67%)
Query: 489 FTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEM 548
F+ ++ ATNGF ++GEGGFG VY+G+L D R VAVK LK G REF AE++
Sbjct: 418 FSYEELVIATNGFSDENLLGEGGFGRVYKGVLPDERVVAVKQLKIGGGQGDREFKAEVDT 477
Query: 549 LSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGA 608
+SR+HHRNL+ + G CI +N R L+Y+ + N +L HLH LDW R+KIA GA
Sbjct: 478 ISRVHHRNLLSMVGYCISENRRLLIYDYVPNNNLYFHLHAAGTPG--LDWATRVKIAAGA 535
Query: 609 ARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTF 668
ARGLAYLHED PR+IHRD KSSNILLE++F VSDFGLA+ ALD N HI+T VMGTF
Sbjct: 536 ARGLAYLHEDCHPRIIHRDIKSSNILLENNFHALVSDFGLAKLALD-CNTHITTRVMGTF 594
Query: 669 GYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLL---TT 725
GY+APEYA +G L KSDV+S+GVVLLEL+TGRKPVD SQP G E+LV WARPLL T
Sbjct: 595 GYMAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDASQPLGDESLVEWARPLLSNATE 654
Query: 726 KEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNE 780
E + DP + N + ++ A+ C++ + RP M ++V+A + E
Sbjct: 655 TEEFTALADPKLGRNYVGVEMFRMIEAAAACIRHSATKRPRMSQIVRAFDSLAEE 709
|
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| TAIR|locus:2159873 PERK8 "proline-rich extensin-like receptor kinase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 774 (277.5 bits), Expect = 9.5e-80, Sum P(2) = 9.5e-80
Identities = 150/290 (51%), Positives = 202/290 (69%)
Query: 489 FTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEM 548
F+ +++ + T+GF ++GEGGFG VY+G+L DGREVAVK LK G REF AE+E+
Sbjct: 327 FSYDELSQVTSGFSEKNLLGEGGFGCVYKGVLSDGREVAVKQLKIGGSQGEREFKAEVEI 386
Query: 549 LSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGA 608
+SR+HHR+LV L G CI + +R LVY+ + N +L HLH + + W+ R+++A GA
Sbjct: 387 ISRVHHRHLVTLVGYCISEQHRLLVYDYVPNNTLHYHLHAPGRP--VMTWETRVRVAAGA 444
Query: 609 ARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD-EGNKHISTHVMGT 667
ARG+AYLHED PR+IHRD KSSNILL++ F V+DFGLA+ A + + N H+ST VMGT
Sbjct: 445 ARGIAYLHEDCHPRIIHRDIKSSNILLDNSFEALVADFGLAKIAQELDLNTHVSTRVMGT 504
Query: 668 FGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLL---T 724
FGY+APEYA +G L K+DVYSYGV+LLEL+TGRKPVD SQP G E+LV WARPLL
Sbjct: 505 FGYMAPEYATSGKLSEKADVYSYGVILLELITGRKPVDTSQPLGDESLVEWARPLLGQAI 564
Query: 725 TKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL 774
E ++DP + N + ++ A+ CV+ + RP M +VV+AL
Sbjct: 565 ENEEFDELVDPRLGKNFIPGEMFRMVEAAAACVRHSAAKRPKMSQVVRAL 614
|
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| UNIPROTKB|Q9ARH1 Q9ARH1 "Receptor protein kinase PERK1" [Brassica napus (taxid:3708)] | Back alignment and assigned GO terms |
|---|
Score = 759 (272.2 bits), Expect = 1.4e-78, Sum P(2) = 1.4e-78
Identities = 148/296 (50%), Positives = 210/296 (70%)
Query: 484 GTAK-TFTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREF 542
G +K TFT ++ +ATNGF + ++G+GGFG V++G+L G+EVAVK LK + G REF
Sbjct: 257 GFSKSTFTYEELARATNGFSEANLLGQGGFGYVHKGVLPSGKEVAVKQLKVGSGQGEREF 316
Query: 543 LAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARM 602
AE+E++SR+HHR+LV L G CI R LVYE + N +LE HLHG+ + ++W R+
Sbjct: 317 QAEVEIISRVHHRHLVSLVGYCIAGAKRLLVYEFVPNNNLELHLHGEGRPT--MEWSTRL 374
Query: 603 KIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIST 662
KIALG+A+GL+YLHED +P++IHRD K+SNIL++ F KV+DFGLA+ A D N H+ST
Sbjct: 375 KIALGSAKGLSYLHEDCNPKIIHRDIKASNILIDFKFEAKVADFGLAKIASDT-NTHVST 433
Query: 663 HVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPL 722
VMGTFGYLAPEYA +G L KSDV+S+GVVLLEL+TGR+PVD + ++LV WARPL
Sbjct: 434 RVMGTFGYLAPEYAASGKLTEKSDVFSFGVVLLELITGRRPVDANNVYVDDSLVDWARPL 493
Query: 723 LT--TKEG-LKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775
L +++G + + D + + + + ++ A A+ CV+ RP M ++V+AL+
Sbjct: 494 LNRASEQGDFEGLADAKMNNGYDREEMARMVACAAACVRHSARRRPRMSQIVRALE 549
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| GSVIVG00034175001 | SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (765 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 897 | |||
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 2e-55 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 9e-55 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 6e-54 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 4e-53 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 1e-52 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 2e-52 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 1e-49 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 2e-40 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 4e-35 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 3e-34 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 1e-33 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 3e-33 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 4e-32 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 4e-32 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 4e-32 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 3e-31 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 7e-31 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 3e-30 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 8e-30 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 3e-29 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 7e-29 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 1e-28 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 2e-28 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 3e-28 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 3e-28 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 1e-27 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 2e-27 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 3e-27 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 5e-27 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 1e-26 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 1e-26 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 2e-26 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 2e-26 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 3e-26 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 5e-26 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 1e-25 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 2e-25 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 2e-25 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 2e-25 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 3e-25 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 7e-25 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 1e-24 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 2e-24 | |
| cd06608 | 275 | cd06608, STKc_myosinIII_like, Catalytic domain of | 3e-24 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 3e-24 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 8e-24 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 1e-23 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 1e-23 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 1e-23 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 2e-23 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 2e-23 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 2e-23 | |
| cd07834 | 330 | cd07834, STKc_MAPK, Catalytic domain of the Serine | 2e-23 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 3e-23 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 7e-23 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 1e-22 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 1e-22 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 1e-22 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 2e-22 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 3e-22 | |
| cd06631 | 265 | cd06631, STKc_YSK4, Catalytic domain of the Protei | 4e-22 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 5e-22 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 6e-22 | |
| cd06621 | 287 | cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of | 7e-22 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 7e-22 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 1e-21 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 1e-21 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 1e-21 | |
| cd05095 | 296 | cd05095, PTKc_DDR2, Catalytic domain of the Protei | 1e-21 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 2e-21 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 2e-21 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 3e-21 | |
| cd08224 | 267 | cd08224, STKc_Nek6_Nek7, Catalytic domain of the P | 4e-21 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 4e-21 | |
| cd06625 | 263 | cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ | 5e-21 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 6e-21 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 6e-21 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 7e-21 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 8e-21 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 9e-21 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 1e-20 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 1e-20 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 1e-20 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 3e-20 | |
| cd06609 | 274 | cd06609, STKc_MST3_like, Catalytic domain of Mamma | 3e-20 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 3e-20 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 5e-20 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 6e-20 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 6e-20 | |
| cd06611 | 280 | cd06611, STKc_SLK_like, Catalytic domain of Ste20- | 2e-19 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 2e-19 | |
| cd05051 | 296 | cd05051, PTKc_DDR, Catalytic domain of the Protein | 2e-19 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 3e-19 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 4e-19 | |
| cd07852 | 337 | cd07852, STKc_MAPK15, Catalytic domain of the Seri | 4e-19 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 5e-19 | |
| cd07858 | 337 | cd07858, STKc_TEY_MAPK_plant, Catalytic domain of | 8e-19 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 9e-19 | |
| cd05088 | 303 | cd05088, PTKc_Tie2, Catalytic domain of the Protei | 1e-18 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 1e-18 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 1e-18 | |
| cd06917 | 277 | cd06917, STKc_NAK1_like, Catalytic domain of Funga | 1e-18 | |
| cd07832 | 286 | cd07832, STKc_CCRK, Catalytic domain of the Serine | 2e-18 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 3e-18 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 4e-18 | |
| cd05109 | 279 | cd05109, PTKc_HER2, Catalytic domain of the Protei | 4e-18 | |
| cd05111 | 279 | cd05111, PTK_HER3, Pseudokinase domain of the Prot | 7e-18 | |
| cd05089 | 297 | cd05089, PTKc_Tie1, Catalytic domain of the Protei | 1e-17 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 1e-17 | |
| cd06619 | 279 | cd06619, PKc_MKK5, Catalytic domain of the dual-sp | 1e-17 | |
| cd05047 | 270 | cd05047, PTKc_Tie, Catalytic domain of Tie Protein | 1e-17 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 1e-17 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 2e-17 | |
| cd07835 | 283 | cd07835, STKc_CDK1_like, Catalytic domain of Cycli | 2e-17 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 2e-17 | |
| cd06613 | 262 | cd06613, STKc_MAP4K3_like, Catalytic domain of Mit | 3e-17 | |
| cd08220 | 256 | cd08220, STKc_Nek8, Catalytic domain of the Protei | 3e-17 | |
| cd05091 | 283 | cd05091, PTKc_Ror2, Catalytic domain of the Protei | 5e-17 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 6e-17 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 7e-17 | |
| cd06607 | 307 | cd06607, STKc_TAO, Catalytic domain of the Protein | 8e-17 | |
| cd07842 | 316 | cd07842, STKc_CDK8_like, Catalytic domain of Cycli | 9e-17 | |
| cd07839 | 284 | cd07839, STKc_CDK5, Catalytic domain of the Serine | 1e-16 | |
| cd05116 | 257 | cd05116, PTKc_Syk, Catalytic domain of the Protein | 1e-16 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 1e-16 | |
| cd07853 | 372 | cd07853, STKc_NLK, Catalytic domain of the Serine/ | 1e-16 | |
| cd07849 | 336 | cd07849, STKc_ERK1_2_like, Catalytic domain of Ext | 2e-16 | |
| cd05108 | 316 | cd05108, PTKc_EGFR, Catalytic domain of the Protei | 2e-16 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 2e-16 | |
| cd05115 | 257 | cd05115, PTKc_Zap-70, Catalytic domain of the Prot | 2e-16 | |
| cd06616 | 288 | cd06616, PKc_MKK4, Catalytic domain of the dual-sp | 2e-16 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 4e-16 | |
| cd07864 | 302 | cd07864, STKc_CDK12, Catalytic domain of the Serin | 4e-16 | |
| cd06644 | 292 | cd06644, STKc_STK10_LOK, Catalytic domain of the P | 5e-16 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 6e-16 | |
| cd05580 | 290 | cd05580, STKc_PKA, Catalytic domain of the Protein | 6e-16 | |
| cd06649 | 331 | cd06649, PKc_MEK2, Catalytic domain of the dual-sp | 6e-16 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 7e-16 | |
| cd07861 | 285 | cd07861, STKc_CDK1_euk, Catalytic domain of the Se | 8e-16 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 9e-16 | |
| cd07847 | 286 | cd07847, STKc_CDKL1_4, Catalytic domain of the Ser | 1e-15 | |
| cd07877 | 345 | cd07877, STKc_p38alpha_MAPK14, Catalytic domain of | 1e-15 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 1e-15 | |
| cd07859 | 338 | cd07859, STKc_TDY_MAPK_plant, Catalytic domain of | 1e-15 | |
| cd07830 | 283 | cd07830, STKc_MAK_like, Catalytic domain of Male g | 2e-15 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 2e-15 | |
| cd07851 | 343 | cd07851, STKc_p38, Catalytic domain of the Serine/ | 2e-15 | |
| cd05043 | 280 | cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece | 2e-15 | |
| cd07860 | 284 | cd07860, STKc_CDK2_3, Catalytic domain of the Seri | 2e-15 | |
| cd08228 | 267 | cd08228, STKc_Nek6, Catalytic domain of the Protei | 3e-15 | |
| cd05074 | 273 | cd05074, PTKc_Tyro3, Catalytic domain of the Prote | 3e-15 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 3e-15 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 4e-15 | |
| cd08225 | 257 | cd08225, STKc_Nek5, Catalytic domain of the Protei | 4e-15 | |
| cd06658 | 292 | cd06658, STKc_PAK5, Catalytic domain of the Protei | 5e-15 | |
| cd05572 | 262 | cd05572, STKc_cGK_PKG, Catalytic domain of the Pro | 5e-15 | |
| cd05042 | 269 | cd05042, PTKc_Aatyk, Catalytic domain of the Prote | 5e-15 | |
| cd07855 | 334 | cd07855, STKc_ERK5, Catalytic domain of the Serine | 6e-15 | |
| cd08229 | 267 | cd08229, STKc_Nek7, Catalytic domain of the Protei | 8e-15 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 8e-15 | |
| cd06615 | 308 | cd06615, PKc_MEK, Catalytic domain of the dual-spe | 1e-14 | |
| cd07862 | 290 | cd07862, STKc_CDK6, Catalytic domain of the Serine | 1e-14 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 1e-14 | |
| cd06618 | 296 | cd06618, PKc_MKK7, Catalytic domain of the dual-sp | 1e-14 | |
| cd07836 | 284 | cd07836, STKc_Pho85, Catalytic domain of the Serin | 2e-14 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 2e-14 | |
| cd05570 | 318 | cd05570, STKc_PKC, Catalytic domain of the Protein | 2e-14 | |
| cd08218 | 256 | cd08218, STKc_Nek1, Catalytic domain of the Protei | 3e-14 | |
| cd08222 | 260 | cd08222, STKc_Nek11, Catalytic domain of the Prote | 3e-14 | |
| cd07843 | 293 | cd07843, STKc_CDC2L1, Catalytic domain of the Seri | 3e-14 | |
| cd06635 | 317 | cd06635, STKc_TAO1, Catalytic domain of the Protei | 3e-14 | |
| cd06633 | 313 | cd06633, STKc_TAO3, Catalytic domain of the Protei | 3e-14 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 3e-14 | |
| cd08528 | 269 | cd08528, STKc_Nek10, Catalytic domain of the Prote | 4e-14 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 4e-14 | |
| cd06636 | 282 | cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr | 6e-14 | |
| cd05632 | 285 | cd05632, STKc_GRK5, Catalytic domain of the Protei | 8e-14 | |
| cd06634 | 308 | cd06634, STKc_TAO2, Catalytic domain of the Protei | 9e-14 | |
| cd07857 | 332 | cd07857, STKc_MPK1, Catalytic domain of the Serine | 9e-14 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 9e-14 | |
| cd06617 | 283 | cd06617, PKc_MKK3_6, Catalytic domain of the dual- | 1e-13 | |
| TIGR03903 | 1266 | TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas | 1e-13 | |
| cd05600 | 333 | cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun | 1e-13 | |
| cd05605 | 285 | cd05605, STKc_GRK4_like, Catalytic domain of G pro | 1e-13 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 1e-13 | |
| cd07848 | 287 | cd07848, STKc_CDKL5, Catalytic domain of the Serin | 2e-13 | |
| cd06643 | 282 | cd06643, STKc_SLK, Catalytic domain of the Protein | 2e-13 | |
| cd07863 | 288 | cd07863, STKc_CDK4, Catalytic domain of the Serine | 2e-13 | |
| cd06637 | 272 | cd06637, STKc_TNIK, Catalytic domain of the Protei | 2e-13 | |
| PLN00009 | 294 | PLN00009, PLN00009, cyclin-dependent kinase A; Pro | 2e-13 | |
| cd07856 | 328 | cd07856, STKc_Sty1_Hog1, Catalytic domain of the S | 3e-13 | |
| cd05631 | 285 | cd05631, STKc_GRK4, Catalytic domain of the Protei | 4e-13 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 4e-13 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 4e-13 | |
| cd05078 | 258 | cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat | 4e-13 | |
| cd06652 | 265 | cd06652, STKc_MEKK2, Catalytic domain of the Prote | 5e-13 | |
| cd07878 | 343 | cd07878, STKc_p38beta_MAPK11, Catalytic domain of | 6e-13 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 8e-13 | |
| cd07854 | 342 | cd07854, STKc_MAPK4_6, Catalytic domain of the Ser | 9e-13 | |
| cd06639 | 291 | cd06639, STKc_myosinIIIB, Catalytic domain of the | 1e-12 | |
| cd07850 | 353 | cd07850, STKc_JNK, Catalytic domain of the Serine/ | 1e-12 | |
| cd05607 | 277 | cd05607, STKc_GRK7, Catalytic domain of the Protei | 1e-12 | |
| cd07876 | 359 | cd07876, STKc_JNK2, Catalytic domain of the Serine | 1e-12 | |
| cd06638 | 286 | cd06638, STKc_myosinIIIA, Catalytic domain of the | 1e-12 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 2e-12 | |
| cd06653 | 264 | cd06653, STKc_MEKK3_like_1, Catalytic domain of MA | 2e-12 | |
| PHA02988 | 283 | PHA02988, PHA02988, hypothetical protein; Provisio | 2e-12 | |
| cd07874 | 355 | cd07874, STKc_JNK3, Catalytic domain of the Serine | 2e-12 | |
| cd06651 | 266 | cd06651, STKc_MEKK3, Catalytic domain of the Prote | 2e-12 | |
| cd05106 | 374 | cd05106, PTKc_CSF-1R, Catalytic domain of the Prot | 3e-12 | |
| cd05087 | 269 | cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t | 3e-12 | |
| cd05584 | 323 | cd05584, STKc_p70S6K, Catalytic domain of the Prot | 3e-12 | |
| cd06622 | 286 | cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of | 4e-12 | |
| cd07865 | 310 | cd07865, STKc_CDK9, Catalytic domain of the Serine | 5e-12 | |
| PTZ00036 | 440 | PTZ00036, PTZ00036, glycogen synthase kinase; Prov | 5e-12 | |
| cd05606 | 278 | cd05606, STKc_beta_ARK, Catalytic domain of the Pr | 5e-12 | |
| cd06646 | 267 | cd06646, STKc_MAP4K5, Catalytic domain of the Prot | 7e-12 | |
| cd07875 | 364 | cd07875, STKc_JNK1, Catalytic domain of the Serine | 7e-12 | |
| cd05573 | 350 | cd05573, STKc_ROCK_NDR_like, Catalytic domain of R | 7e-12 | |
| cd06645 | 267 | cd06645, STKc_MAP4K3, Catalytic domain of the Prot | 7e-12 | |
| PLN00034 | 353 | PLN00034, PLN00034, mitogen-activated protein kina | 8e-12 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 9e-12 | |
| cd06659 | 297 | cd06659, STKc_PAK6, Catalytic domain of the Protei | 1e-11 | |
| cd05037 | 259 | cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom | 1e-11 | |
| cd07869 | 303 | cd07869, STKc_PFTAIRE1, Catalytic domain of the Se | 2e-11 | |
| cd05589 | 324 | cd05589, STKc_PKN, Catalytic domain of the Protein | 2e-11 | |
| cd05086 | 268 | cd05086, PTKc_Aatyk2, Catalytic domain of the Prot | 2e-11 | |
| cd05571 | 323 | cd05571, STKc_PKB, Catalytic domain of the Protein | 2e-11 | |
| cd07844 | 291 | cd07844, STKc_PCTAIRE_like, Catalytic domain of PC | 2e-11 | |
| cd05633 | 279 | cd05633, STKc_GRK3, Catalytic domain of the Protei | 2e-11 | |
| PHA03209 | 357 | PHA03209, PHA03209, serine/threonine kinase US3; P | 2e-11 | |
| PTZ00024 | 335 | PTZ00024, PTZ00024, cyclin-dependent protein kinas | 2e-11 | |
| cd07880 | 343 | cd07880, STKc_p38gamma_MAPK12, Catalytic domain of | 4e-11 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 4e-11 | |
| cd07879 | 342 | cd07879, STKc_p38delta_MAPK13, Catalytic domain of | 5e-11 | |
| cd05617 | 327 | cd05617, STKc_aPKC_zeta, Catalytic domain of the P | 8e-11 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 9e-11 | |
| cd08219 | 255 | cd08219, STKc_Nek3, Catalytic domain of the Protei | 9e-11 | |
| cd05604 | 325 | cd05604, STKc_SGK3, Catalytic domain of the Protei | 1e-10 | |
| cd05615 | 323 | cd05615, STKc_cPKC_alpha, Catalytic domain of the | 1e-10 | |
| cd05575 | 323 | cd05575, STKc_SGK, Catalytic domain of the Protein | 3e-10 | |
| PTZ00267 | 478 | PTZ00267, PTZ00267, NIMA-related protein kinase; P | 3e-10 | |
| cd07831 | 282 | cd07831, STKc_MOK, Catalytic domain of the Serine/ | 3e-10 | |
| cd07870 | 291 | cd07870, STKc_PFTAIRE2, Catalytic domain of the Se | 4e-10 | |
| cd05609 | 305 | cd05609, STKc_MAST, Catalytic domain of the Protei | 4e-10 | |
| PTZ00263 | 329 | PTZ00263, PTZ00263, protein kinase A catalytic sub | 4e-10 | |
| PTZ00283 | 496 | PTZ00283, PTZ00283, serine/threonine protein kinas | 5e-10 | |
| cd08223 | 257 | cd08223, STKc_Nek4, Catalytic domain of the Protei | 6e-10 | |
| cd05585 | 312 | cd05585, STKc_YPK1_like, Catalytic domain of Yeast | 6e-10 | |
| cd07837 | 295 | cd07837, STKc_CdkB_plant, Catalytic domain of the | 7e-10 | |
| cd05618 | 329 | cd05618, STKc_aPKC_iota, Catalytic domain of the P | 8e-10 | |
| cd05613 | 290 | cd05613, STKc_MSK1_N, N-terminal catalytic domain | 1e-09 | |
| cd05054 | 337 | cd05054, PTKc_VEGFR, Catalytic domain of the Prote | 1e-09 | |
| cd07872 | 309 | cd07872, STKc_PCTAIRE2, Catalytic domain of the Se | 1e-09 | |
| cd05594 | 325 | cd05594, STKc_PKB_alpha, Catalytic domain of the P | 1e-09 | |
| cd07873 | 301 | cd07873, STKc_PCTAIRE1, Catalytic domain of the Se | 1e-09 | |
| cd05104 | 375 | cd05104, PTKc_Kit, Catalytic domain of the Protein | 1e-09 | |
| PRK13184 | 932 | PRK13184, pknD, serine/threonine-protein kinase; R | 1e-09 | |
| cd05593 | 328 | cd05593, STKc_PKB_gamma, Catalytic domain of the P | 2e-09 | |
| cd07871 | 288 | cd07871, STKc_PCTAIRE3, Catalytic domain of the Se | 2e-09 | |
| cd05588 | 329 | cd05588, STKc_aPKC, Catalytic domain of the Protei | 3e-09 | |
| cd05596 | 370 | cd05596, STKc_ROCK, Catalytic domain of the Protei | 4e-09 | |
| PHA03212 | 391 | PHA03212, PHA03212, serine/threonine kinase US3; P | 4e-09 | |
| cd05591 | 321 | cd05591, STKc_nPKC_epsilon, Catalytic domain of th | 6e-09 | |
| cd05614 | 332 | cd05614, STKc_MSK2_N, N-terminal catalytic domain | 6e-09 | |
| cd05592 | 316 | cd05592, STKc_nPKC_theta_delta, Catalytic domain o | 6e-09 | |
| cd05623 | 332 | cd05623, STKc_MRCK_alpha, Catalytic domain of the | 8e-09 | |
| cd05620 | 316 | cd05620, STKc_nPKC_delta, Catalytic domain of the | 8e-09 | |
| cd05610 | 669 | cd05610, STKc_MASTL, Catalytic domain of the Prote | 9e-09 | |
| cd05587 | 324 | cd05587, STKc_cPKC, Catalytic domain of the Protei | 1e-08 | |
| cd05077 | 262 | cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do | 1e-08 | |
| cd05076 | 274 | cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do | 1e-08 | |
| cd05595 | 323 | cd05595, STKc_PKB_beta, Catalytic domain of the Pr | 2e-08 | |
| cd05603 | 321 | cd05603, STKc_SGK2, Catalytic domain of the Protei | 2e-08 | |
| PTZ00426 | 340 | PTZ00426, PTZ00426, cAMP-dependent protein kinase | 2e-08 | |
| cd05586 | 330 | cd05586, STKc_Sck1_like, Catalytic domain of Suppr | 2e-08 | |
| cd05103 | 343 | cd05103, PTKc_VEGFR2, Catalytic domain of the Prot | 2e-08 | |
| cd05616 | 323 | cd05616, STKc_cPKC_beta, Catalytic domain of the P | 6e-08 | |
| cd05622 | 371 | cd05622, STKc_ROCK1, Catalytic domain of the Prote | 6e-08 | |
| PTZ00266 | 1021 | PTZ00266, PTZ00266, NIMA-related protein kinase; P | 6e-08 | |
| PHA03207 | 392 | PHA03207, PHA03207, serine/threonine kinase US3; P | 8e-08 | |
| cd05599 | 364 | cd05599, STKc_NDR_like, Catalytic domain of Nuclea | 8e-08 | |
| cd05102 | 338 | cd05102, PTKc_VEGFR3, Catalytic domain of the Prot | 1e-07 | |
| cd05105 | 400 | cd05105, PTKc_PDGFR_alpha, Catalytic domain of the | 1e-07 | |
| cd05621 | 370 | cd05621, STKc_ROCK2, Catalytic domain of the Prote | 2e-07 | |
| cd05597 | 331 | cd05597, STKc_DMPK_like, Catalytic domain of Myoto | 3e-07 | |
| cd05602 | 325 | cd05602, STKc_SGK1, Catalytic domain of the Protei | 4e-07 | |
| cd05601 | 330 | cd05601, STKc_CRIK, Catalytic domain of the Protei | 8e-07 | |
| cd05624 | 331 | cd05624, STKc_MRCK_beta, Catalytic domain of the P | 1e-06 | |
| cd05628 | 363 | cd05628, STKc_NDR1, Catalytic domain of the Protei | 1e-06 | |
| PHA03307 | 1352 | PHA03307, PHA03307, transcriptional regulator ICP4 | 1e-06 | |
| cd05627 | 360 | cd05627, STKc_NDR2, Catalytic domain of the Protei | 1e-06 | |
| cd05574 | 316 | cd05574, STKc_phototropin_like, Catalytic domain o | 2e-06 | |
| cd08216 | 314 | cd08216, PK_STRAD, Pseudokinase domain of STE20-re | 2e-06 | |
| cd05107 | 401 | cd05107, PTKc_PDGFR_beta, Catalytic domain of the | 4e-06 | |
| cd07867 | 317 | cd07867, STKc_CDC2L6, Catalytic domain of Serine/T | 4e-06 | |
| cd08226 | 328 | cd08226, PK_STRAD_beta, Pseudokinase domain of STE | 5e-06 | |
| PHA03307 | 1352 | PHA03307, PHA03307, transcriptional regulator ICP4 | 1e-05 | |
| cd07868 | 317 | cd07868, STKc_CDK8, Catalytic domain of the Serine | 1e-05 | |
| cd05598 | 376 | cd05598, STKc_LATS, Catalytic domain of the Protei | 1e-05 | |
| PHA03247 | 3151 | PHA03247, PHA03247, large tegument protein UL36; P | 3e-05 | |
| cd05576 | 237 | cd05576, STKc_RPK118_like, Catalytic domain of the | 4e-05 | |
| PHA03247 | 3151 | PHA03247, PHA03247, large tegument protein UL36; P | 6e-05 | |
| PHA03247 | 3151 | PHA03247, PHA03247, large tegument protein UL36; P | 7e-05 | |
| PHA03210 | 501 | PHA03210, PHA03210, serine/threonine kinase US3; P | 8e-05 | |
| cd05629 | 377 | cd05629, STKc_NDR_like_fungal, Catalytic domain of | 8e-05 | |
| cd05120 | 155 | cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot | 1e-04 | |
| cd05106 | 374 | cd05106, PTKc_CSF-1R, Catalytic domain of the Prot | 3e-04 | |
| PHA03390 | 267 | PHA03390, pk1, serine/threonine-protein kinase 1; | 4e-04 | |
| pfam03154 | 979 | pfam03154, Atrophin-1, Atrophin-1 family | 6e-04 | |
| PHA03247 | 3151 | PHA03247, PHA03247, large tegument protein UL36; P | 0.001 | |
| PHA03247 | 3151 | PHA03247, PHA03247, large tegument protein UL36; P | 0.001 | |
| cd05625 | 382 | cd05625, STKc_LATS1, Catalytic domain of the Prote | 0.001 | |
| PHA03247 | 3151 | PHA03247, PHA03247, large tegument protein UL36; P | 0.002 | |
| COG0478 | 304 | COG0478, COG0478, RIO-like serine/threonine protei | 0.002 | |
| PLN03225 | 566 | PLN03225, PLN03225, Serine/threonine-protein kinas | 0.002 | |
| pfam05109 | 830 | pfam05109, Herpes_BLLF1, Herpes virus major outer | 0.002 | |
| PHA03378 | 991 | PHA03378, PHA03378, EBNA-3B; Provisional | 0.003 | |
| pfam03154 | 979 | pfam03154, Atrophin-1, Atrophin-1 family | 0.004 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 191 bits (489), Expect = 2e-55
Identities = 89/278 (32%), Positives = 125/278 (44%), Gaps = 31/278 (11%)
Query: 504 SRIIGEGGFGVVYRGILDD-----GREVAVKVLKR-ANQHGGREFLAELEMLSRLHHRNL 557
+ +GEG FG VY+G L EVAVK LK A++ EFL E ++ +L H N+
Sbjct: 4 GKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNV 63
Query: 558 VKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHE 617
VKL GVC E+ +V E + G L S+L K L + AL ARG+ YL
Sbjct: 64 VKLLGVCTEEEPLYIVMEYMEGGDLLSYLR---KNRPKLSLSDLLSFALQIARGMEYLE- 119
Query: 618 DSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAM 677
S IHRD + N L+ + K+SDFGL+R L + + + ++APE
Sbjct: 120 --SKNFIHRDLAARNCLVGENLVVKISDFGLSR-DLYDDDYYRKRGGKLPIRWMAPESLK 176
Query: 678 TGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPV 736
G KSDV+S+GV+L E+ T G +P PG N L L
Sbjct: 177 EGKFTSKSDVWSFGVLLWEIFTLGEQP-----YPGMSNEEVLEY--LKNGYRLP------ 223
Query: 737 IESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL 774
N ++ + C + RP E+V+ L
Sbjct: 224 QPPNCP----PELYDLMLQCWAEDPEDRPTFSELVEIL 257
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 190 bits (484), Expect = 9e-55
Identities = 87/277 (31%), Positives = 125/277 (45%), Gaps = 30/277 (10%)
Query: 505 RIIGEGGFGVVYRGILDDG-----REVAVKVLKR-ANQHGGREFLAELEMLSRLHHRNLV 558
+ +GEG FG VY+G L EVAVK LK A++ EFL E ++ +L H N+V
Sbjct: 5 KKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIV 64
Query: 559 KLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHED 618
KL GVC E+ +V E + G L +L L + AL ARG+ YL
Sbjct: 65 KLLGVCTEEEPLMIVMEYMPGGDLLDYLR--KNRPKELSLSDLLSFALQIARGMEYLE-- 120
Query: 619 SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMT 678
S IHRD + N L+ + K+SDFGL+R L + + + ++APE
Sbjct: 121 -SKNFIHRDLAARNCLVGENLVVKISDFGLSR-DLYDDDYYKVKGGKLPIRWMAPESLKE 178
Query: 679 GHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVI 737
G KSDV+S+GV+L E+ T G +P PG N K+G + P
Sbjct: 179 GKFTSKSDVWSFGVLLWEIFTLGEEP-----YPGMSNAEVLEY----LKKGYRLPKPPNC 229
Query: 738 ESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL 774
++ + C + RP E+V+ L
Sbjct: 230 PP--------ELYKLMLQCWAEDPEDRPTFSELVEIL 258
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 186 bits (474), Expect = 6e-54
Identities = 76/195 (38%), Positives = 112/195 (57%), Gaps = 12/195 (6%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGRE-FLAELEMLSRLHHRNLVKLFGVC 564
+GEGGFG VY G++VA+K++K+ + E L E+E+L +L+H N+VKL+GV
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60
Query: 565 IEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVI 624
++N+ LV E GSL+ L + G L D ++I L GL YLH S +I
Sbjct: 61 EDENHLYLVMEYCEGGSLKDLLK---ENEGKLSEDEILRILLQILEGLEYLH---SNGII 114
Query: 625 HRDFKSSNILL-EHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLL- 682
HRD K NILL + K++DFGL++ L +K + ++GT Y+APE +
Sbjct: 115 HRDLKPENILLDSDNGKVKLADFGLSK--LLTSDKSLLKTIVGTPAYMAPEVLLGKGYYS 172
Query: 683 VKSDVYSYGVVLLEL 697
KSD++S GV+L EL
Sbjct: 173 EKSDIWSLGVILYEL 187
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 185 bits (472), Expect = 4e-53
Identities = 73/210 (34%), Positives = 102/210 (48%), Gaps = 14/210 (6%)
Query: 505 RIIGEGGFGVVYRGILDDG----REVAVKVLKRANQHGGR-EFLAELEMLSRLHHRNLVK 559
+ +GEG FG VY+G L EVAVK LK R +FL E ++ +L H N+V+
Sbjct: 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60
Query: 560 LFGVCIEDNNRCLVYELIHNGSLESHL-----HGDDKVNGPLDWDARMKIALGAARGLAY 614
L GVC E+ LV E + G L +L L + A+ A+G+ Y
Sbjct: 61 LLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEY 120
Query: 615 LHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPE 674
L S + +HRD + N L+ D K+SDFGL+R D+ T ++APE
Sbjct: 121 LA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPE 177
Query: 675 YAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
G KSDV+S+GV+L E+ T G P
Sbjct: 178 SLKDGIFTSKSDVWSFGVLLWEIFTLGATP 207
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 184 bits (469), Expect = 1e-52
Identities = 82/289 (28%), Positives = 121/289 (41%), Gaps = 54/289 (18%)
Query: 505 RIIGEGGFGVVYRGILDD-----GREVAVKVLKRANQHGGR-EFLAELEMLSRLHHRNLV 558
+ +GEG FG VY+G L +VAVK LK R EFL E ++ +L H N+V
Sbjct: 5 KKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIV 64
Query: 559 KLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHED 618
+L GVC + +V E + G L L K L +++AL A+G+ YL
Sbjct: 65 RLLGVCTQGEPLYIVTEYMPGGDLLDFLR---KHGEKLTLKDLLQMALQIAKGMEYLE-- 119
Query: 619 SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYL-----AP 673
S +HRD + N L+ + K+SDFGL+R ++ + G L AP
Sbjct: 120 -SKNFVHRDLAARNCLVTENLVVKISDFGLSRDIYED-----DYYRKRGGGKLPIKWMAP 173
Query: 674 EYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAW-------ARPLLTT 725
E G KSDV+S+GV+L E+ T G +P +E ++ RP
Sbjct: 174 ESLKDGKFTSKSDVWSFGVLLWEIFTLGEQP--YPGMSNEE-VLELLEDGYRLPRPENCP 230
Query: 726 KEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL 774
E + + C + RP E+V+ L
Sbjct: 231 DE---------------------LYELMLQCWAYDPEDRPTFSELVEDL 258
|
Length = 258 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 183 bits (467), Expect = 2e-52
Identities = 77/207 (37%), Positives = 107/207 (51%), Gaps = 13/207 (6%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGG--REFLAELEMLSRLHHRNL 557
+ R +G G FG VY+ G+ VAVK+LK+ ++ + E+ +L RL H N+
Sbjct: 1 YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNI 60
Query: 558 VKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHE 617
V+L + ++ LV E G L +L GPL D KIAL RGL YLH
Sbjct: 61 VRLIDAFEDKDHLYLVMEYCEGGDLFDYLS----RGGPLSEDEAKKIALQILRGLEYLHS 116
Query: 618 DSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPE-YA 676
+ +IHRD K NILL+ + K++DFGLA+ + T +GT Y+APE
Sbjct: 117 N---GIIHRDLKPENILLDENGVVKIADFGLAKKL--LKSSSSLTTFVGTPWYMAPEVLL 171
Query: 677 MTGHLLVKSDVYSYGVVLLELLTGRKP 703
K DV+S GV+L ELLTG+ P
Sbjct: 172 GGNGYGPKVDVWSLGVILYELLTGKPP 198
|
Length = 260 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 175 bits (446), Expect = 1e-49
Identities = 78/206 (37%), Positives = 107/206 (51%), Gaps = 14/206 (6%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGRE-FLAELEMLSRLHHRNLV 558
+ +GEG FG VY G+ VA+KV+K+ RE L E+++L +L H N+V
Sbjct: 1 YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIV 60
Query: 559 KLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLD-WDARMKIALGAARGLAYLHE 617
+L+ V +++ LV E G L L K G L +AR L YLH
Sbjct: 61 RLYDVFEDEDKLYLVMEYCEGGDLFDLL----KKRGRLSEDEAR-FYLRQILSALEYLH- 114
Query: 618 DSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAM 677
S ++HRD K NILL+ D K++DFGLAR LD G K T +GT Y+APE +
Sbjct: 115 --SKGIVHRDLKPENILLDEDGHVKLADFGLAR-QLDPGEKL--TTFVGTPEYMAPEVLL 169
Query: 678 TGHLLVKSDVYSYGVVLLELLTGRKP 703
D++S GV+L ELLTG+ P
Sbjct: 170 GKGYGKAVDIWSLGVILYELLTGKPP 195
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 149 bits (379), Expect = 2e-40
Identities = 65/207 (31%), Positives = 98/207 (47%), Gaps = 18/207 (8%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKV--LKRANQHGGREFLAELEMLSRLHHRNLVKLF 561
++G G FG VY + D G +AVK L ++ E+ +LS L H N+V+ +
Sbjct: 6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYY 65
Query: 562 GVCI--EDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAA---RGLAYLH 616
G E N + E + GSL S L K+ P+ I GLAYLH
Sbjct: 66 GSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPV-------IRKYTRQILEGLAYLH 118
Query: 617 EDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYA 676
S ++HRD K +NIL++ D K++DFG A+ D + V GT ++APE
Sbjct: 119 ---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVI 175
Query: 677 MTGHLLVKSDVYSYGVVLLELLTGRKP 703
+D++S G ++E+ TG+ P
Sbjct: 176 RGEEYGRAADIWSLGCTVIEMATGKPP 202
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 134 bits (338), Expect = 4e-35
Identities = 69/199 (34%), Positives = 107/199 (53%), Gaps = 7/199 (3%)
Query: 501 FHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKL 560
F R +G G FG V+ G+ + VA+K+LK + ++F E++ L RL H++L+ L
Sbjct: 8 FTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISL 67
Query: 561 FGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSS 620
F VC ++ EL+ GSL + L + L + + +A A G+AYL E
Sbjct: 68 FAVCSVGEPVYIITELMEKGSLLAFLRSPEGQV--LPVASLIDMACQVAEGMAYLEEQ-- 123
Query: 621 PRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGH 680
IHRD + NIL+ D KV+DFGLAR ++ ++S+ + + APE A G
Sbjct: 124 -NSIHRDLAARNILVGEDLVCKVADFGLARLIKED--VYLSSDKKIPYKWTAPEAASHGT 180
Query: 681 LLVKSDVYSYGVVLLELLT 699
KSDV+S+G++L E+ T
Sbjct: 181 FSTKSDVWSFGILLYEMFT 199
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 132 bits (334), Expect = 3e-34
Identities = 73/217 (33%), Positives = 108/217 (49%), Gaps = 21/217 (9%)
Query: 505 RIIGEGGFGVVYRGIL------DDGREVAVKVLKRANQHGGRE-FLAELEMLSRLHHRNL 557
R +GEG FG V+ G +D VAVK LK + R+ F E E+L+ H N+
Sbjct: 11 RELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENI 70
Query: 558 VKLFGVCIEDNNRCLVYELIHNGSLESHL--HGDDKV--------NGPLDWDARMKIALG 607
VK +GVC E + +V+E + +G L L HG D G L ++IA+
Sbjct: 71 VKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQ 130
Query: 608 AARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGT 667
A G+ YL +S +HRD + N L+ +D K+ DFG++R + H M
Sbjct: 131 IASGMVYL---ASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLP 187
Query: 668 FGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
++ PE M +SDV+S+GVVL E+ T G++P
Sbjct: 188 IRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQP 224
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 129 bits (327), Expect = 1e-33
Identities = 64/198 (32%), Positives = 104/198 (52%), Gaps = 10/198 (5%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCI 565
IG+GGFG VY+ G+EVA+KV+K ++ + + E+++L + H N+VK +G +
Sbjct: 8 IGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYL 67
Query: 566 EDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIH 625
+ + +V E GSL+ L N L + +GL YLH + +IH
Sbjct: 68 KKDELWIVMEFCSGGSLKDLL---KSTNQTLTESQIAYVCKELLKGLEYLHSN---GIIH 121
Query: 626 RDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKS 685
RD K++NILL D K+ DFGL+ D ++ ++GT ++APE K+
Sbjct: 122 RDIKAANILLTSDGEVKLIDFGLSAQLSDTKARN---TMVGTPYWMAPEVINGKPYDYKA 178
Query: 686 DVYSYGVVLLELLTGRKP 703
D++S G+ +EL G+ P
Sbjct: 179 DIWSLGITAIELAEGKPP 196
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 132 bits (332), Expect = 3e-33
Identities = 79/278 (28%), Positives = 120/278 (43%), Gaps = 23/278 (8%)
Query: 500 GFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGRE---FLAELEMLSRL-HHR 555
+ R +GEG FG VY D + VA+KVL + + +E FL E+++L+ L H
Sbjct: 1 SYRILRKLGEGSFGEVYLAR--DRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPP 58
Query: 556 NLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYL 615
N+VKL+ ++ + LV E + GSLE L GPL + I L YL
Sbjct: 59 NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLK-KIGRKGPLSESEALFILAQILSALEYL 117
Query: 616 HEDSSPRVIHRDFKSSNILL-EHDFTPKVSDFGLARTALDEG----NKHISTHVMGTFGY 670
H +IHRD K NILL K+ DFGLA+ D G + + +GT GY
Sbjct: 118 HSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGY 174
Query: 671 LAPEYAM---TGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKE 727
+APE + + SD++S G+ L ELLTG P + + + L E
Sbjct: 175 MAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQT-----LKIILE 229
Query: 728 GLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRP 765
+ + + + + + + +R
Sbjct: 230 LPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRL 267
|
Length = 384 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 125 bits (316), Expect = 4e-32
Identities = 69/209 (33%), Positives = 104/209 (49%), Gaps = 18/209 (8%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGG--REFLAELEMLSRLHHRNL 557
+ +IG G FGVVY+G+ L+ G VA+K + + + E+++L L H N+
Sbjct: 2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNI 61
Query: 558 VKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAA---RGLAY 614
VK G ++ ++ E NGSL + L +A+ +GLAY
Sbjct: 62 VKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESL-------VAVYVYQVLQGLAY 114
Query: 615 LHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPE 674
LHE VIHRD K++NIL D K++DFG+A T L++ V+GT ++APE
Sbjct: 115 LHEQG---VIHRDIKAANILTTKDGVVKLADFGVA-TKLND-VSKDDASVVGTPYWMAPE 169
Query: 675 YAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
SD++S G ++ELLTG P
Sbjct: 170 VIEMSGASTASDIWSLGCTVIELLTGNPP 198
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 126 bits (318), Expect = 4e-32
Identities = 81/227 (35%), Positives = 108/227 (47%), Gaps = 28/227 (12%)
Query: 504 SRIIGEGGFGVVYRGILD-----DGREVAVKVLKRA--NQHGGREFLAELEMLSRLHHRN 556
+ +GEG FG V D G +VAVK L + QH +F E+E+L L H N
Sbjct: 9 IKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHR-SDFEREIEILRTLDHEN 67
Query: 557 LVKLFGVCIEDNNR--CLVYELIHNGSLESHLHGD-DKVNGPLDWDARMKIALGAARGLA 613
+VK GVC + R L+ E + +GSL +L D++N + + +G+
Sbjct: 68 IVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKR----LLLFSSQICKGMD 123
Query: 614 YLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMG---TFGY 670
YL S R IHRD + NIL+E + K+SDFGLA+ L E + G F Y
Sbjct: 124 YLG---SQRYIHRDLAARNILVESEDLVKISDFGLAK-VLPEDKDYYYVKEPGESPIFWY 179
Query: 671 LAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLV 716
APE T SDV+S+GV L EL T G SQ P E L
Sbjct: 180 -APECLRTSKFSSASDVWSFGVTLYELFTYGDP----SQSPPAEFLR 221
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 125 bits (315), Expect = 4e-32
Identities = 71/203 (34%), Positives = 102/203 (50%), Gaps = 23/203 (11%)
Query: 507 IGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIE 566
IG+G FG V G G++VAVK LK + + FLAE +++ L H NLV+L GV ++
Sbjct: 14 IGKGEFGDVMLGDYR-GQKVAVKCLKD-DSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQ 71
Query: 567 DNNRCLVYELIHNGSLESHL--HGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVI 624
N +V E + GSL +L G + ++ AL G+ YL E +
Sbjct: 72 GNPLYIVTEYMAKGSLVDYLRSRGRAVITL----AQQLGFALDVCEGMEYLEEK---NFV 124
Query: 625 HRDFKSSNILLEHDFTPKVSDFGLARTA---LDEGNKHISTHVMGTFGYLAPEYAMTGHL 681
HRD + N+L+ D KVSDFGLA+ A D G + + APE
Sbjct: 125 HRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVK--------WTAPEALREKKF 176
Query: 682 LVKSDVYSYGVVLLELLT-GRKP 703
KSDV+S+G++L E+ + GR P
Sbjct: 177 STKSDVWSFGILLWEIYSFGRVP 199
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 123 bits (310), Expect = 3e-31
Identities = 70/203 (34%), Positives = 108/203 (53%), Gaps = 14/203 (6%)
Query: 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVC 564
R +G G FG V+ G+ ++ VAVK LK ++FLAE +++ +L H L++L+ VC
Sbjct: 12 RKLGAGQFGEVWEGLWNNTTPVAVKTLK-PGTMDPKDFLAEAQIMKKLRHPKLIQLYAVC 70
Query: 565 IEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVI 624
+ +V EL+ GSL +L G L + +A A G+AYL + I
Sbjct: 71 TLEEPIYIVTELMKYGSLLEYLQGGA--GRALKLPQLIDMAAQVASGMAYLEAQN---YI 125
Query: 625 HRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGT---FGYLAPEYAMTGHL 681
HRD + N+L+ + KV+DFGLAR ++ I G + APE A+
Sbjct: 126 HRDLAARNVLVGENNICKVADFGLARVIKED----IYEAREGAKFPIKWTAPEAALYNRF 181
Query: 682 LVKSDVYSYGVVLLELLT-GRKP 703
+KSDV+S+G++L E++T GR P
Sbjct: 182 SIKSDVWSFGILLTEIVTYGRMP 204
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 121 bits (307), Expect = 7e-31
Identities = 62/208 (29%), Positives = 95/208 (45%), Gaps = 20/208 (9%)
Query: 505 RIIGEGGFGVVYRG-ILDDGREVAVKV--LKRANQHGGREFLAELEMLSRLHHRNLVKLF 561
+ IG+G FG VY DG+ +K L ++ + L E+++L +L+H N++K +
Sbjct: 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYY 65
Query: 562 GVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSP 621
E C+V E G L + K P + + + L YLH
Sbjct: 66 ESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR--- 122
Query: 622 RVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPE------Y 675
+++HRD K NI L + K+ DFG+++ L T V+GT YL+PE Y
Sbjct: 123 KILHRDIKPQNIFLTSNGLVKLGDFGISKV-LSSTVDLAKT-VVGTPYYLSPELCQNKPY 180
Query: 676 AMTGHLLVKSDVYSYGVVLLELLTGRKP 703
KSD++S G VL EL T + P
Sbjct: 181 N------YKSDIWSLGCVLYELCTLKHP 202
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 120 bits (302), Expect = 3e-30
Identities = 70/208 (33%), Positives = 102/208 (49%), Gaps = 12/208 (5%)
Query: 499 NGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLV 558
R +G G FG V+ G + +VAVK LK FL E +++ +L H LV
Sbjct: 6 ESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPE-AFLQEAQIMKKLRHDKLV 64
Query: 559 KLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHED 618
+L+ VC E+ +V E + GSL L + L + +A A G+AYL
Sbjct: 65 QLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRL--PQLVDMAAQIAEGMAYLESR 122
Query: 619 SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTF--GYLAPEYA 676
IHRD + NIL+ + K++DFGLAR D+ + F + APE A
Sbjct: 123 ---NYIHRDLAARNILVGENLVCKIADFGLARLIEDD---EYTAREGAKFPIKWTAPEAA 176
Query: 677 MTGHLLVKSDVYSYGVVLLELLT-GRKP 703
G +KSDV+S+G++L E++T GR P
Sbjct: 177 NYGRFTIKSDVWSFGILLTEIVTYGRVP 204
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 118 bits (298), Expect = 8e-30
Identities = 67/203 (33%), Positives = 109/203 (53%), Gaps = 15/203 (7%)
Query: 507 IGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIE 566
IG G FG+V+ G + R+VA+K + R +F+ E +++ +L H LV+L+GVC E
Sbjct: 12 IGSGQFGLVWLGYWLEKRKVAIKTI-REGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTE 70
Query: 567 DNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHR 626
+ CLV+E + +G L +L G + + + L G+AYL + VIHR
Sbjct: 71 RSPICLVFEFMEHGCLSDYLRAQ---RGKFSQETLLGMCLDVCEGMAYLESSN---VIHR 124
Query: 627 DFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGT---FGYLAPEYAMTGHLLV 683
D + N L+ + KVSDFG+ R LD+ ++ S+ GT + +PE
Sbjct: 125 DLAARNCLVGENQVVKVSDFGMTRFVLDD--QYTSST--GTKFPVKWSSPEVFSFSKYSS 180
Query: 684 KSDVYSYGVVLLELLT-GRKPVD 705
KSDV+S+GV++ E+ + G+ P +
Sbjct: 181 KSDVWSFGVLMWEVFSEGKTPYE 203
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 117 bits (296), Expect = 3e-29
Identities = 80/288 (27%), Positives = 129/288 (44%), Gaps = 34/288 (11%)
Query: 502 HTSRIIGEGGFGVVYRGILDD------GREVAVKVL-KRANQHGGREFLAELEMLSRLHH 554
R +G+G FG+VY G+ VA+K + + A+ EFL E ++ +
Sbjct: 9 TLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNC 68
Query: 555 RNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHG----DDKVNG--PLDWDARMKIALGA 608
++V+L GV +V EL+ G L+S+L + G P +++A
Sbjct: 69 HHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEI 128
Query: 609 ARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTF 668
A G+AYL + +HRD + N ++ D T K+ DFG+ R + +
Sbjct: 129 ADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPV 185
Query: 669 GYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEG 728
++APE G KSDV+S+GVVL E+ T L++ P Q L+ +E
Sbjct: 186 RWMAPESLKDGVFTTKSDVWSFGVVLWEMAT------LAEQPYQG---------LSNEEV 230
Query: 729 LKTIID-PVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775
LK +ID ++ + K+ + MC Q RP E+V +LK
Sbjct: 231 LKFVIDGGHLDLPENCP--DKLLELMRMCWQYNPKMRPTFLEIVSSLK 276
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 7e-29
Identities = 73/207 (35%), Positives = 105/207 (50%), Gaps = 21/207 (10%)
Query: 507 IGEGGFGVVYRGI--LDDGRE--VAVKVLKR-ANQHGGREFLAELEMLSRLHHRNLVKLF 561
+G G FG V +G+ + G+E VAVK LK+ G +EFL E ++++L H +V+L
Sbjct: 3 LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLI 62
Query: 562 GVCIEDNNRCLVYELIHNGSLESHL--HGDDKVNGPLDWDARMKIALGAARGLAYLHEDS 619
GVC + LV EL G L +L + V+ + A A G+AYL
Sbjct: 63 GVCKGE-PLMLVMELAPLGPLLKYLKKRREIPVSDLKEL------AHQVAMGMAYLESK- 114
Query: 620 SPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTF--GYLAPEYAM 677
+HRD + N+LL + K+SDFG++R AL G+ + G + + APE
Sbjct: 115 --HFVHRDLAARNVLLVNRHQAKISDFGMSR-ALGAGSDYYRATTAGRWPLKWYAPECIN 171
Query: 678 TGHLLVKSDVYSYGVVLLELLT-GRKP 703
G KSDV+SYGV L E + G KP
Sbjct: 172 YGKFSSKSDVWSYGVTLWEAFSYGAKP 198
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 1e-28
Identities = 68/207 (32%), Positives = 96/207 (46%), Gaps = 19/207 (9%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLK--RANQHGGREFLAELEMLSRLHHRNLVKLFGV 563
IG G FG VY + LD G +AVK ++ + +E E+++L L H NLVK +GV
Sbjct: 8 IGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGV 67
Query: 564 CIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRV 623
+ + E G+LE L LD L GLAYLH +
Sbjct: 68 EVHREKVYIFMEYCSGGTLEELLEH----GRILDEHVIRVYTLQLLEGLAYLHSH---GI 120
Query: 624 IHRDFKSSNILLEHDFTPKVSDFG----LARTALDEGNKHISTHVMGTFGYLAPE---YA 676
+HRD K +NI L+H+ K+ DFG L G + S GT Y+APE
Sbjct: 121 VHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSL--AGTPAYMAPEVITGG 178
Query: 677 MTGHLLVKSDVYSYGVVLLELLTGRKP 703
+D++S G V+LE+ TG++P
Sbjct: 179 KGKGHGRAADIWSLGCVVLEMATGKRP 205
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 115 bits (289), Expect = 2e-28
Identities = 75/207 (36%), Positives = 102/207 (49%), Gaps = 19/207 (9%)
Query: 507 IGEGGFGVVYRGILDD--GR--EVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKLF 561
+G+G FGVV RG G+ VAVK LK +FL E ++ L H NL++L+
Sbjct: 3 LGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLY 62
Query: 562 GVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLD--WDARMKIALGAARGLAYLHEDS 619
GV + + +V EL GSL L D + + D ++IA G+ YL
Sbjct: 63 GVVL-THPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIA----NGMRYLE--- 114
Query: 620 SPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH--ISTHVMGTFGYLAPEYAM 677
S R IHRD + NILL D K+ DFGL R AL + H + H+ F + APE
Sbjct: 115 SKRFIHRDLAARNILLASDDKVKIGDFGLMR-ALPQNEDHYVMEEHLKVPFAWCAPESLR 173
Query: 678 TGHLLVKSDVYSYGVVLLELLT-GRKP 703
T SDV+ +GV L E+ T G +P
Sbjct: 174 TRTFSHASDVWMFGVTLWEMFTYGEEP 200
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 114 bits (287), Expect = 3e-28
Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 507 IGEGGFGVVYRGIL-DDGREVAVKV--LKRANQHGGREFLAELEMLSRLHHRNLVKLFGV 563
IG+G FGVV++ + D R A+K L + N+ E + E +L++L +++ +
Sbjct: 8 IGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYES 67
Query: 564 CIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRV 623
++ +V E NG L L PL D + + GLA+LH S ++
Sbjct: 68 FLDKGKLNIVMEYAENGDLHKLLKMQRG--RPLPEDQVWRFFIQILLGLAHLH---SKKI 122
Query: 624 IHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLV 683
+HRD KS N+ L+ K+ D G+A+ D N + ++GT YL+PE
Sbjct: 123 LHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN--FANTIVGTPYYLSPELCEDKPYNE 180
Query: 684 KSDVYSYGVVLLELLTGRKPVD 705
KSDV++ GVVL E TG+ P D
Sbjct: 181 KSDVWALGVVLYECCTGKHPFD 202
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 114 bits (287), Expect = 3e-28
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 13/213 (6%)
Query: 507 IGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLA-ELEMLSRLHHRNLVKLFGVC 564
+G+G GVVY+ G+ A+K + R+ L EL+ L +VK +G
Sbjct: 9 LGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAF 68
Query: 565 IEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVI 624
++ +V E + GSL L K G + IA +GL YLH +I
Sbjct: 69 YKEGEISIVLEYMDGGSLADLL----KKVGKIPEPVLAYIARQILKGLDYLHTKR--HII 122
Query: 625 HRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVK 684
HRD K SN+L+ K++DFG+++ + ++ +T V GT Y++PE
Sbjct: 123 HRDIKPSNLLINSKGEVKIADFGISKVLENTLDQC-NTFV-GTVTYMSPERIQGESYSYA 180
Query: 685 SDVYSYGVVLLELLTGRKPVDLSQPPGQENLVA 717
+D++S G+ LLE G+ P PPGQ +
Sbjct: 181 ADIWSLGLTLLECALGKFPF---LPPGQPSFFE 210
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 1e-27
Identities = 62/203 (30%), Positives = 95/203 (46%), Gaps = 22/203 (10%)
Query: 507 IGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIE 566
+G G FGVV+ G +VA+K+++ +F+ E +++ +L H NLV+L+GVC +
Sbjct: 12 LGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTK 70
Query: 567 DNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAA----RGLAYLHEDSSPR 622
+V E + NG L ++L + L + YL +
Sbjct: 71 QRPIFIVTEYMANGCLLNYLRERKGK-------LGTEWLLDMCSDVCEAMEYLESNG--- 120
Query: 623 VIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGT---FGYLAPEYAMTG 679
IHRD + N L+ D KVSDFGLAR LD+ T GT + PE
Sbjct: 121 FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQ----YTSSQGTKFPVKWAPPEVFDYS 176
Query: 680 HLLVKSDVYSYGVVLLELLTGRK 702
KSDV+S+GV++ E+ + K
Sbjct: 177 RFSSKSDVWSFGVLMWEVFSEGK 199
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 112 bits (283), Expect = 2e-27
Identities = 72/208 (34%), Positives = 100/208 (48%), Gaps = 29/208 (13%)
Query: 506 IIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGG--REFLAELEMLSRLHHRNLVKLFG 562
+GEG +GVVY+ G VA+K ++ N+ G L E+ +L L H N+VKL
Sbjct: 6 KLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLD 65
Query: 563 VCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARM--KIALGAARGLAYLHEDSS 620
V + LV+E L+ +L DK GPL + I RGLAY H S
Sbjct: 66 VIHTERKLYLVFEYCDM-DLKKYL---DKRPGPLS--PNLIKSIMYQLLRGLAYCH---S 116
Query: 621 PRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGH 680
R++HRD K NIL+ D K++DFGLAR + TH + T Y APE
Sbjct: 117 HRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTY--THEVVTLWYRAPE------ 168
Query: 681 LLVKSDVYSYGV-------VLLELLTGR 701
+L+ S YS V + E++TG+
Sbjct: 169 ILLGSKHYSTAVDIWSVGCIFAEMITGK 196
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 111 bits (278), Expect = 3e-27
Identities = 70/199 (35%), Positives = 104/199 (52%), Gaps = 11/199 (5%)
Query: 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKLFGV 563
IG+G FG VY+G+L EVAVK + R+FL E E+L + H N+VKL GV
Sbjct: 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGV 60
Query: 564 CIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRV 623
C++ +V EL+ GSL + L K L ++++L AA G+ YL S
Sbjct: 61 CVQKQPIYIVMELVPGGSLLTFLR---KKKNRLTVKKLLQMSLDAAAGMEYLE---SKNC 114
Query: 624 IHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTF--GYLAPEYAMTGHL 681
IHRD + N L+ + K+SDFG++R +EG + + + + APE G
Sbjct: 115 IHRDLAARNCLVGENNVLKISDFGMSRE--EEGGIYTVSDGLKQIPIKWTAPEALNYGRY 172
Query: 682 LVKSDVYSYGVVLLELLTG 700
+SDV+SYG++L E +
Sbjct: 173 TSESDVWSYGILLWETFSL 191
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 5e-27
Identities = 72/221 (32%), Positives = 107/221 (48%), Gaps = 31/221 (14%)
Query: 507 IGEGGFGVVYRGIL------DDGREVAVKVLKRANQHGGR-EFLAELEMLSRLHHRNLVK 559
+GEG FG VY+G L VA+K LK + + EF E E++S L H N+V
Sbjct: 13 LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVC 72
Query: 560 LFGVCIEDNNRCLVYELIHNGSLESHL------------HGDDKVNGPLDWDARMKIALG 607
L GVC ++ C+++E + +G L L GD+ V LD + IA+
Sbjct: 73 LLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQ 132
Query: 608 AARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGT 667
A G+ YL SS +HRD + N L+ T K+SDFGL+R + V
Sbjct: 133 IAAGMEYL---SSHHFVHRDLAARNCLVGEGLTVKISDFGLSR----DIYSADYYRVQSK 185
Query: 668 ----FGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
++ PE + G +SD++S+GVVL E+ + G +P
Sbjct: 186 SLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQP 226
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 110 bits (275), Expect = 1e-26
Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 21/215 (9%)
Query: 507 IGEGGFGVVY----RGILDDGRE--VAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKL 560
+GEG FG V+ +L + + VAVK LK A++ ++F E E+L+ L H+++V+
Sbjct: 13 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRF 72
Query: 561 FGVCIEDNNRCLVYELIHNGSLESHL--HGDD---------KVNGPLDWDARMKIALGAA 609
+GVC E +V+E + +G L L HG D G L + IA A
Sbjct: 73 YGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIA 132
Query: 610 RGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFG 669
G+ YL +S +HRD + N L+ K+ DFG++R + M
Sbjct: 133 SGMVYL---ASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 189
Query: 670 YLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
++ PE + +SD++S+GVVL E+ T G++P
Sbjct: 190 WMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQP 224
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 110 bits (275), Expect = 1e-26
Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 19/215 (8%)
Query: 505 RIIGEGGFGVVYRGIL------DDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLV 558
R +GEG FG V+ D VAVK LK A+ + ++F E E+L+ L H ++V
Sbjct: 11 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIV 70
Query: 559 KLFGVCIEDNNRCLVYELIHNGSLESHL--HGDDKV-----NGP--LDWDARMKIALGAA 609
K +GVC+E + +V+E + +G L L HG D V N P L + IA A
Sbjct: 71 KFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIA 130
Query: 610 RGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFG 669
G+ YL +S +HRD + N L+ + K+ DFG++R + H M
Sbjct: 131 AGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR 187
Query: 670 YLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
++ PE M +SDV+S GVVL E+ T G++P
Sbjct: 188 WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 222
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 2e-26
Identities = 68/206 (33%), Positives = 104/206 (50%), Gaps = 11/206 (5%)
Query: 507 IGEGGFGVVYRG-ILDDGREVAVKVLKRA-NQHGGREFLAELEMLSRLHHRNLVKLFGVC 564
+G G GVV + G+ +AVK ++ N+ ++ L EL++L + + +V +G
Sbjct: 9 LGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAF 68
Query: 565 IEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVI 624
+ + + E + GSL+ L +V G + KIA+ +GL YLHE +I
Sbjct: 69 YNNGDISICMEYMDGGSLDKIL---KEVQGRIPERILGKIAVAVLKGLTYLHEKHK--II 123
Query: 625 HRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVK 684
HRD K SNIL+ K+ DFG++ ++ K T V GT Y+APE VK
Sbjct: 124 HRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAK---TFV-GTSSYMAPERIQGNDYSVK 179
Query: 685 SDVYSYGVVLLELLTGRKPVDLSQPP 710
SD++S G+ L+EL TGR P P
Sbjct: 180 SDIWSLGLSLIELATGRFPYPPENDP 205
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 2e-26
Identities = 68/218 (31%), Positives = 104/218 (47%), Gaps = 22/218 (10%)
Query: 505 RIIGEGGFGVVYRG------ILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLV 558
R +GEG FG V+ D VAVK LK ++F E E+L+ L H ++V
Sbjct: 11 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIV 70
Query: 559 KLFGVCIEDNNRCLVYELIHNGSLESHL--HGDD----------KVNGPLDWDARMKIAL 606
K +GVC + + +V+E + +G L L HG D + G L + IA
Sbjct: 71 KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 130
Query: 607 GAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMG 666
A G+ YL +S +HRD + N L+ + K+ DFG++R + H M
Sbjct: 131 QIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTML 187
Query: 667 TFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
++ PE M +SDV+S+GV+L E+ T G++P
Sbjct: 188 PIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 225
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 109 bits (273), Expect = 3e-26
Identities = 66/215 (30%), Positives = 112/215 (52%), Gaps = 28/215 (13%)
Query: 505 RIIGEGGFGVVYRGI-LDDGR----EVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLV 558
+++G G FG VY+G+ + +G VA+KVL+ +E L E +++ + H ++V
Sbjct: 13 KVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVV 72
Query: 559 KLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGP---LDWDARMKIALGAARGLAYL 615
+L G+C+ L+ +L+ G L ++ G L+W + A+G++YL
Sbjct: 73 RLLGICLSSQ-VQLITQLMPLGCLLDYVRNHKDNIGSQYLLNW------CVQIAKGMSYL 125
Query: 616 HEDSSPRVIHRDFKSSNILLEHDFTP---KVSDFGLARTALDEGNKH-ISTHVMGTFGYL 671
E R++HRD + N+L++ TP K++DFGLA+ LD K + ++
Sbjct: 126 EEK---RLVHRDLAARNVLVK---TPQHVKITDFGLAKL-LDVDEKEYHAEGGKVPIKWM 178
Query: 672 APEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVD 705
A E + KSDV+SYGV + EL+T G KP +
Sbjct: 179 ALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYE 213
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 5e-26
Identities = 83/293 (28%), Positives = 140/293 (47%), Gaps = 26/293 (8%)
Query: 486 AKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRG-ILDDGREVAVKVLKRANQHGGREFLA 544
+K+ T+NDI + +I G G Y+G + +G + VK + N +
Sbjct: 680 SKSITINDILSSLK---EENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIP----SS 732
Query: 545 ELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKI 604
E+ + +L H N+VKL G+C + L++E I +L L L W+ R KI
Sbjct: 733 EIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN-------LSWERRRKI 785
Query: 605 ALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHV 664
A+G A+ L +LH SP V+ + I+++ P + L + IS+
Sbjct: 786 AIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTKCFISS-- 842
Query: 665 MGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLT 724
Y+APE T + KSD+Y +G++L+ELLTG+ P D ++ ++V WAR +
Sbjct: 843 ----AYVAPETRETKDITEKSDIYGFGLILIELLTGKSPAD-AEFGVHGSIVEWARYCYS 897
Query: 725 TKEGLKTIIDPVIESNISYDT--LVKVAAIASMCVQPEVSHRPFMGEVVQALK 775
L IDP I ++S + +V+V +A C + + RP +V++ L+
Sbjct: 898 DCH-LDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLE 949
|
Length = 968 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 1e-25
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 18/208 (8%)
Query: 505 RIIGEGGFGVVYRGILD-DGRE---VAVKVLKRANQHGGR-EFLAELEMLSRLHHRNLVK 559
++IG G FG V RG L G++ VA+K LK + R +FL E ++ + H N+++
Sbjct: 10 KVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIR 69
Query: 560 LFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDS 619
L GV + ++ E + NGSL+ L +D G + + G A G+ YL E +
Sbjct: 70 LEGVVTKSRPVMIITEYMENGSLDKFLREND---GKFTVGQLVGMLRGIASGMKYLSEMN 126
Query: 620 SPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMG---TFGYLAPEYA 676
+HRD + NIL+ + KVSDFGL+R L++ +T G + APE
Sbjct: 127 Y---VHRDLAARNILVNSNLVCKVSDFGLSR-RLEDSEATYTT--KGGKIPIRWTAPEAI 180
Query: 677 MTGHLLVKSDVYSYGVVLLELLT-GRKP 703
SDV+S+G+V+ E+++ G +P
Sbjct: 181 AYRKFTSASDVWSFGIVMWEVMSYGERP 208
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 106 bits (268), Expect = 2e-25
Identities = 71/240 (29%), Positives = 109/240 (45%), Gaps = 55/240 (22%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLA-ELEMLSRLHHRNLVKLFGVC 564
IGEG G VY+ G+EVA+K ++ Q+ +E + E+ ++ H N+V +
Sbjct: 27 IGEGASGEVYKATDRATGKEVAIKKMRLRKQN--KELIINEILIMKDCKHPNIVDYYDSY 84
Query: 565 IEDNNRCLVYELIHNGSL------------ESHLHGDDKVNGPLDWDARMKIALGAARGL 612
+ + +V E + GSL E + A + +GL
Sbjct: 85 LVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQI-------------AY--VCREVLQGL 129
Query: 613 AYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLA 672
YLH S VIHRD KS NILL D + K++DFG A L + ++ V+GT ++A
Sbjct: 130 EYLH---SQNVIHRDIKSDNILLSKDGSVKLADFGFA-AQLTKEKSKRNS-VVGTPYWMA 184
Query: 673 PE------YAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTK 726
PE Y K D++S G++ +E+ G P L +PP + A L+TTK
Sbjct: 185 PEVIKRKDYGP------KVDIWSLGIMCIEMAEGEPPY-LREPPLR------ALFLITTK 231
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 2e-25
Identities = 68/211 (32%), Positives = 105/211 (49%), Gaps = 27/211 (12%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHG-GREFLAELE----MLSRLHHRNLV 558
++G G FG VY G+ LDDG AVK + A+ G+E + +LE +LS+L H N+V
Sbjct: 6 ELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIV 65
Query: 559 KLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHED 618
+ G E++N + EL+ GSL L P+ +I LG L YLH
Sbjct: 66 QYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLG----LEYLH-- 119
Query: 619 SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVM-----GTFGYLAP 673
+HRD K +NIL++ + K++DFG+A K + G+ ++AP
Sbjct: 120 -DRNTVHRDIKGANILVDTNGVVKLADFGMA--------KQVVEFSFAKSFKGSPYWMAP 170
Query: 674 EYAM-TGHLLVKSDVYSYGVVLLELLTGRKP 703
E G + +D++S G +LE+ TG+ P
Sbjct: 171 EVIAQQGGYGLAADIWSLGCTVLEMATGKPP 201
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 106 bits (265), Expect = 2e-25
Identities = 70/219 (31%), Positives = 110/219 (50%), Gaps = 34/219 (15%)
Query: 507 IGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIE 566
+G G FG V+ G + +VA+K LK+ + FLAE ++ +L H LV+L+ V +
Sbjct: 14 LGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSP-EAFLAEANLMKQLQHPRLVRLYAVVTQ 72
Query: 567 DNNRCLVYELIHNGSLESHLHGDD----KVNGPLDWDARMKIALGAARGLAYLHEDSSPR 622
+ ++ E + NGSL L + +N +D A++ A G+A++ +
Sbjct: 73 EPIY-IITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQI------AEGMAFIERKNY-- 123
Query: 623 VIHRDFKSSNILLEHDFTPKVSDFGLARTALD------EGNKHISTHVMGTFGYLAPEYA 676
IHRD +++NIL+ K++DFGLAR D EG K + APE
Sbjct: 124 -IHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKF-------PIKWTAPEAI 175
Query: 677 MTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQEN 714
G +KSDV+S+G++L E++T GR P PG N
Sbjct: 176 NYGTFTIKSDVWSFGILLTEIVTYGRIPY-----PGMTN 209
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 3e-25
Identities = 74/222 (33%), Positives = 106/222 (47%), Gaps = 32/222 (14%)
Query: 505 RIIGEGGFGVVYRG----ILDDGRE---VAVKVLKR-ANQHGGREFLAELEMLSRLHHRN 556
+G G FG VY G IL G VAVK L++ A +EFL E ++S +H N
Sbjct: 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPN 60
Query: 557 LVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGP---LDWDARMKIALGAARGLA 613
+VKL GVC+ + + ++ EL+ G L S+L L + I L A+G
Sbjct: 61 IVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCV 120
Query: 614 YLHEDSSPRVIHRDFKSSNILL-----EHDFTPKVSDFGLARTALD------EGNKHIST 662
YL + IHRD + N L+ + D K+ DFGLAR EG +
Sbjct: 121 YLEQ---MHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPV 177
Query: 663 HVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
M APE + G +SDV+S+GV++ E+LT G++P
Sbjct: 178 RWM------APESLLDGKFTTQSDVWSFGVLMWEILTLGQQP 213
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 7e-25
Identities = 80/216 (37%), Positives = 116/216 (53%), Gaps = 23/216 (10%)
Query: 491 LNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLS 550
L +++K T G IIGEG FG V +G G++VAVK +K + FL E +++
Sbjct: 2 LLNLQKLTLG----EIIGEGEFGAVLQGEYT-GQKVAVKNIK--CDVTAQAFLEETAVMT 54
Query: 551 RLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLH--GDDKVNGPLDWDARMKIALGA 608
+LHH+NLV+L GV I N +V EL+ G+L + L G V+ ++ +L
Sbjct: 55 KLHHKNLVRLLGV-ILHNGLYIVMELMSKGNLVNFLRTRGRALVSVI----QLLQFSLDV 109
Query: 609 ARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTF 668
A G+ YL S +++HRD + NIL+ D KVSDFGLAR G+ + +
Sbjct: 110 AEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLARV----GSMGVDNSKL-PV 161
Query: 669 GYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
+ APE KSDV+SYGV+L E+ + GR P
Sbjct: 162 KWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAP 197
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 1e-24
Identities = 77/209 (36%), Positives = 106/209 (50%), Gaps = 29/209 (13%)
Query: 507 IGEGGFGVVY--RGILDDGREVAVKVLKRAN--QHGGREF-LAELEMLSRLHHRNLVKLF 561
+G+G FG V R D G+ A+KVLK+ + E L E +LSR++H +VKL
Sbjct: 1 LGKGSFGKVLLVR-KKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLH 59
Query: 562 GVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMK-----IALGAARGLAYLH 616
+ LV E G L SHL G + R + I L L YLH
Sbjct: 60 YAFQTEEKLYLVLEYAPGGELFSHL----SKEGRFS-EERARFYAAEIVLA----LEYLH 110
Query: 617 EDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYA 676
S +I+RD K NILL+ D K++DFGLA+ EG++ +T GT YLAPE
Sbjct: 111 ---SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSR-TNTFC-GTPEYLAPEVL 165
Query: 677 M-TGHLLVKS-DVYSYGVVLLELLTGRKP 703
+ G+ K+ D +S GV+L E+LTG+ P
Sbjct: 166 LGKGY--GKAVDWWSLGVLLYEMLTGKPP 192
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 2e-24
Identities = 72/208 (34%), Positives = 103/208 (49%), Gaps = 24/208 (11%)
Query: 505 RIIGEGGFGVVYRGIL--DDGREV--AVKVLKRANQHGGRE-FLAELEMLSRLHHRNLVK 559
R+IG+G FG VY G L DG+++ AVK L R E FL E ++ H N++
Sbjct: 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLS 60
Query: 560 LFGVCIEDNNRCLVYELIHNGSLESHLHGD------DKVNGPLDWDARMKIALGAARGLA 613
L G+C+ LV L HGD + + P D + L A+G+
Sbjct: 61 LLGICLPSEGSPLVV-------LPYMKHGDLRNFIRSETHNPTVKDL-IGFGLQVAKGME 112
Query: 614 YLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG--NKHISTHVMGTFGYL 671
YL +S + +HRD + N +L+ FT KV+DFGLAR D+ + H T ++
Sbjct: 113 YL---ASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWM 169
Query: 672 APEYAMTGHLLVKSDVYSYGVVLLELLT 699
A E T KSDV+S+GV+L EL+T
Sbjct: 170 ALESLQTQKFTTKSDVWSFGVLLWELMT 197
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 3e-24
Identities = 70/217 (32%), Positives = 100/217 (46%), Gaps = 31/217 (14%)
Query: 506 IIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRL-HHRNLVKLFGV 563
+IGEG +G VY+ G+ VA+K++ E E +L + +H N+ +G
Sbjct: 13 VIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEE-EEIKEEYNILRKYSNHPNIATFYGA 71
Query: 564 CIEDNNRC------LVYELIHNGSLESHLHGDDKVNGPLDWDARMK------IALGAARG 611
I+ N LV EL GS+ D V G R+K I RG
Sbjct: 72 FIKKNPPGNDDQLWLVMELCGGGSVT------DLVKGLRKKGKRLKEEWIAYILRETLRG 125
Query: 612 LAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYL 671
LAYLHE+ +VIHRD K NILL + K+ DFG++ LD +T + GT ++
Sbjct: 126 LAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFGVSAQ-LDSTLGRRNTFI-GTPYWM 180
Query: 672 APE-----YAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
APE +SDV+S G+ +EL G+ P
Sbjct: 181 APEVIACDEQPDASYDARSDVWSLGITAIELADGKPP 217
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 103 bits (257), Expect = 3e-24
Identities = 90/293 (30%), Positives = 131/293 (44%), Gaps = 37/293 (12%)
Query: 505 RIIGEGGFGVV----YRGILDD-GREVAVKVLKRANQHGGRE-FLAELEMLSRLHHRNLV 558
R++GEG FG V Y D G VAVK LKR + E+ +L L+H N+V
Sbjct: 10 RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIV 69
Query: 559 KLFGVCIEDNNRC--LVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLH 616
K G C E + L+ E + GSL +L L+ + A G+AYLH
Sbjct: 70 KYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKHK-----LNLAQLLLFAQQICEGMAYLH 124
Query: 617 EDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMG---TFGYLAP 673
S IHRD + N+LL++D K+ DFGLA+ A+ EG+++ G F Y A
Sbjct: 125 ---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAK-AVPEGHEYYRVREDGDSPVFWY-AV 179
Query: 674 EYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTII 733
E SDV+S+GV L ELLT D Q P ++ ++ K+G T++
Sbjct: 180 ECLKENKFSYASDVWSFGVTLYELLTH---CDSKQSPPKKFE-----EMIGPKQGQMTVV 231
Query: 734 DPVIESNISYDTL-------VKVAAIASMCVQPEVSHRPFMGEVVQALKLVCN 779
+IE L +V + C + E RP ++ LK + +
Sbjct: 232 -RLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMHH 283
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 8e-24
Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 16/212 (7%)
Query: 500 GFHTSRIIGEGGFGVVY----RGILDDGRE--VAVKVL-KRANQHGGREFLAELEMLSRL 552
+G G FG V+ +GI ++G E V VK L K +++ EF EL+M +L
Sbjct: 6 NLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKL 65
Query: 553 HHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHL----HGDDKVNG-PLDWDARMKIALG 607
H+N+V+L G+C E ++ E G L+ L D+K+ PL ++ +
Sbjct: 66 SHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQ 125
Query: 608 AARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGT 667
A G+ +L S+ R +HRD + N L+ KVS L++ + + ++
Sbjct: 126 IALGMDHL---SNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALI-P 181
Query: 668 FGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT 699
+LAPE KSDV+S+GV++ E+ T
Sbjct: 182 LRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFT 213
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 101 bits (252), Expect = 1e-23
Identities = 70/203 (34%), Positives = 103/203 (50%), Gaps = 19/203 (9%)
Query: 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVC 564
+ IG+G FG V G G +VAVK +K N + FLAE ++++L H NLV+L GV
Sbjct: 12 QTIGKGEFGDVMLGDYR-GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 565 IEDNNRC-LVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRV 623
+E+ +V E + GSL +L + L D +K +L + YL ++
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEANN---F 123
Query: 624 IHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTF--GYLAPEYAMTGHL 681
+HRD + N+L+ D KVSDFGL + A ST G + APE
Sbjct: 124 VHRDLAARNVLVSEDNVAKVSDFGLTKEA-------SSTQDTGKLPVKWTAPEALREKKF 176
Query: 682 LVKSDVYSYGVVLLELLT-GRKP 703
KSDV+S+G++L E+ + GR P
Sbjct: 177 STKSDVWSFGILLWEIYSFGRVP 199
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 101 bits (252), Expect = 1e-23
Identities = 72/210 (34%), Positives = 108/210 (51%), Gaps = 16/210 (7%)
Query: 507 IGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIE 566
+G G FG V+ G + +VAVK LK FL E +++ +L H LV+L+ V +
Sbjct: 14 LGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAV-VS 71
Query: 567 DNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHR 626
+ +V E + GSL L + L + +A A G+AY+ + IHR
Sbjct: 72 EEPIYIVTEYMSKGSLLDFLKDGEGRA--LKLPNLVDMAAQVAAGMAYIERMN---YIHR 126
Query: 627 DFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTH-VMGTFGYLAPEYAMTGHLLVKS 685
D +S+NIL+ K++DFGLAR L E N++ + + APE A+ G +KS
Sbjct: 127 DLRSANILVGDGLVCKIADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 184
Query: 686 DVYSYGVVLLELLT-GRKPVDLSQPPGQEN 714
DV+S+G++L EL+T GR P PG N
Sbjct: 185 DVWSFGILLTELVTKGRVPY-----PGMNN 209
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 1e-23
Identities = 61/201 (30%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGG--REFLAELEMLSRLHHRNLVKLFGV 563
IGEG +GVVY+ G VA+K +K + G + L E+++L L+H N++KL V
Sbjct: 7 IGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDV 66
Query: 564 CIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRV 623
+ LV+E + L +GLA+ H S +
Sbjct: 67 FRHKGDLYLVFEFMD----TDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCH---SHGI 119
Query: 624 IHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIS-THVMGTFGYLAPE--YAMTGH 680
+HRD K N+L+ + K++DFGLAR+ G+ TH + T Y APE G+
Sbjct: 120 LHRDLKPENLLINTEGVLKLADFGLARSF---GSPVRPYTHYVVTRWYRAPELLLGDKGY 176
Query: 681 LLVKSDVYSYGVVLLELLTGR 701
D++S G + ELL+ R
Sbjct: 177 -STPVDIWSVGCIFAELLSRR 196
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 2e-23
Identities = 61/223 (27%), Positives = 95/223 (42%), Gaps = 54/223 (24%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGRE-----FLAELEMLSRLHHRNLV 558
IGEG +G VY+ G VA LK+ +E + E+++L +L H N+V
Sbjct: 5 AQIGEGTYGQVYKARNKKTGELVA---LKKIRMENEKEGFPITAIREIKLLQKLRHPNIV 61
Query: 559 KLFGVCIED--NNRCLVYE--------LIHNGSL---ESHLHGDDKVNGPLDWDARMKIA 605
+L + + +V+E L+ + + ES +
Sbjct: 62 RLKEIVTSKGKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKC---------------YM 106
Query: 606 LGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVM 665
GL YLH S ++HRD K SNIL+ +D K++DFGLAR + + V+
Sbjct: 107 KQLLEGLQYLH---SNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVI 163
Query: 666 GTFGYLAPEYAMTGHLLV-------KSDVYSYGVVLLELLTGR 701
T Y PE LL+ + D++S G +L EL G+
Sbjct: 164 -TLWYRPPE------LLLGATRYGPEVDMWSVGCILAELFLGK 199
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 2e-23
Identities = 65/228 (28%), Positives = 101/228 (44%), Gaps = 34/228 (14%)
Query: 501 FHTSRIIGEGGFGVVYRGIL-DDGREVAVKVL--KRANQHGGREF-LAELEMLSRL-HHR 555
F +IIGEG F V + +E A+K+L ++ + ++ E E+L+RL H
Sbjct: 3 FKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHP 62
Query: 556 NLVKLFGVCIEDNNRC-LVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAY 614
++KL+ +D V E NG L ++ + G LD A L Y
Sbjct: 63 GIIKLYY-TFQDEENLYFVLEYAPNGELLQYI----RKYGSLDEKCTRFYAAEILLALEY 117
Query: 615 LHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIST------------ 662
LH S +IHRD K NILL+ D K++DFG A+ LD + S
Sbjct: 118 LH---SKGIIHRDLKPENILLDKDMHIKITDFGTAKV-LDPNSSPESNKGDATNIDSQIE 173
Query: 663 -------HVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
+GT Y++PE SD+++ G ++ ++LTG+ P
Sbjct: 174 KNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPP 221
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 2e-23
Identities = 64/204 (31%), Positives = 108/204 (52%), Gaps = 15/204 (7%)
Query: 507 IGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIE 566
+G G FGVV G +VA+K++K + EF+ E +++ +L H LV+L+GVC +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMKLSHEKLVQLYGVCTK 70
Query: 567 DNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHR 626
+V E + NG L ++L K P +++ G+AYL S + IHR
Sbjct: 71 QRPIYIVTEYMSNGCLLNYLREHGKRFQPSQL---LEMCKDVCEGMAYLE---SKQFIHR 124
Query: 627 DFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGT---FGYLAPEYAMTGHLLV 683
D + N L++ KVSDFGL+R LD+ ++ S+ +G+ + PE +
Sbjct: 125 DLAARNCLVDDQGCVKVSDFGLSRYVLDD--EYTSS--VGSKFPVRWSPPEVLLYSKFSS 180
Query: 684 KSDVYSYGVVLLELLT-GRKPVDL 706
KSDV+++GV++ E+ + G+ P +
Sbjct: 181 KSDVWAFGVLMWEVYSLGKMPYER 204
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 101 bits (255), Expect = 2e-23
Identities = 70/211 (33%), Positives = 100/211 (47%), Gaps = 26/211 (12%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQH--GGREFLAELEMLSRLHHRNLVKLF 561
+ IG G +GVV + GR+VA+K + + L E+++L L H N++ L
Sbjct: 6 KPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLL 65
Query: 562 GVCIEDNNRC-----LVYELIHNGSLESHLHGDDKV---NGPLDWDARMK-IALGAARGL 612
+ + +V EL +E+ LH KV PL D ++ RGL
Sbjct: 66 DILRPPSPEDFNDVYIVTEL-----METDLH---KVIKSPQPLT-DDHIQYFLYQILRGL 116
Query: 613 AYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTA-LDEGNKHISTHVMGTFGYL 671
YLH S VIHRD K SNIL+ + K+ DFGLAR DE K T + T Y
Sbjct: 117 KYLH---SANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYR 173
Query: 672 APEYAMTGHLLVKS-DVYSYGVVLLELLTGR 701
APE ++ K+ D++S G + ELLT +
Sbjct: 174 APELLLSSSRYTKAIDIWSVGCIFAELLTRK 204
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 99.7 bits (248), Expect = 3e-23
Identities = 71/195 (36%), Positives = 99/195 (50%), Gaps = 8/195 (4%)
Query: 506 IIGEGGFGVVYRGILDDGREVAVKVLKR-ANQHGGREFLAELEMLSRLHHRNLVKLFGVC 564
++G+G FG V++G L D VAVK K Q +FL+E +L + H N+VKL GVC
Sbjct: 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVC 61
Query: 565 IEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVI 624
+ +V EL+ G S L K L +K AL AA G+AYL S I
Sbjct: 62 TQRQPIYIVMELVPGGDFLSFLR---KKKDELKTKQLVKFALDAAAGMAYLE---SKNCI 115
Query: 625 HRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVK 684
HRD + N L+ + K+SDFG++R D+G S + APE G +
Sbjct: 116 HRDLAARNCLVGENNVLKISDFGMSRQE-DDGIYSSSGLKQIPIKWTAPEALNYGRYSSE 174
Query: 685 SDVYSYGVVLLELLT 699
SDV+SYG++L E +
Sbjct: 175 SDVWSYGILLWETFS 189
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 99.0 bits (246), Expect = 7e-23
Identities = 69/199 (34%), Positives = 107/199 (53%), Gaps = 11/199 (5%)
Query: 507 IGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIE 566
+G+G FG V+ G + VA+K LK FL E +++ +L H LV+L+ V E
Sbjct: 14 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE 72
Query: 567 DNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHR 626
+ +V E + GSL L G ++ L + +A A G+AY+ + +HR
Sbjct: 73 EPIY-IVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHR 126
Query: 627 DFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTH-VMGTFGYLAPEYAMTGHLLVKS 685
D +++NIL+ + KV+DFGLAR L E N++ + + APE A+ G +KS
Sbjct: 127 DLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 184
Query: 686 DVYSYGVVLLELLT-GRKP 703
DV+S+G++L EL T GR P
Sbjct: 185 DVWSFGILLTELTTKGRVP 203
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 99.2 bits (248), Expect = 1e-22
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 34/220 (15%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLK---RANQHGGREFLA--ELEMLSRLHHRNLVKL 560
+GEG + VVY+ + GR VA+K +K R G F A E+++L L H N++ L
Sbjct: 8 LGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGL 67
Query: 561 FGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSS 620
V +N LV+E + LE + V P D + M + L RGL YLH +
Sbjct: 68 LDVFGHKSNINLVFEFME-TDLEKVIKDKSIVLTPADIKSYMLMTL---RGLEYLHSNW- 122
Query: 621 PRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGH 680
++HRD K +N+L+ D K++DFGLAR+ K TH + T Y APE
Sbjct: 123 --ILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKM--THQVVTRWYRAPE------ 172
Query: 681 LLVKS-------DVYSYGVVLLELLTGRKPV-----DLSQ 708
LL + D++S G + ELL R P D+ Q
Sbjct: 173 LLFGARHYGVGVDMWSVGCIFAELLL-RVPFLPGDSDIDQ 211
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 98.4 bits (245), Expect = 1e-22
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 16/209 (7%)
Query: 507 IGEGGFGVVYRGILDD-GREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCI 565
+G G +G VY G+ VAVK LK EFL E ++ + H NLV+L GVC
Sbjct: 14 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 72
Query: 566 EDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIH 625
+ ++ E + G+L +L ++ ++ + +A + + YL + + IH
Sbjct: 73 REPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEKKN---FIH 127
Query: 626 RDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTF--GYLAPEYAMTGHLLV 683
RD + N L+ + KV+DFGL+R + + H F + APE +
Sbjct: 128 RDLAARNCLVGENHLVKVADFGLSRLMTGDT---YTAHAGAKFPIKWTAPESLAYNKFSI 184
Query: 684 KSDVYSYGVVLLELLT-GRKP---VDLSQ 708
KSDV+++GV+L E+ T G P +DLSQ
Sbjct: 185 KSDVWAFGVLLWEIATYGMSPYPGIDLSQ 213
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 98.4 bits (245), Expect = 1e-22
Identities = 67/207 (32%), Positives = 106/207 (51%), Gaps = 15/207 (7%)
Query: 506 IIGEGGFGVVYRGILD-DGRE---VAVKVLKRA-NQHGGREFLAELEMLSRLHHRNLVKL 560
+IG G FG V RG L G+ VA+K LK + R+FL+E ++ + H N++ L
Sbjct: 11 VIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHL 70
Query: 561 FGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSS 620
GV + ++ E + NG+L+S L +D + ++ G A G+ YL E +
Sbjct: 71 EGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYLSEMN- 126
Query: 621 PRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMG---TFGYLAPEYAM 677
+HRD + NIL+ + KVSDFGL+R D+ + T +G + APE
Sbjct: 127 --YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIA 184
Query: 678 TGHLLVKSDVYSYGVVLLELLT-GRKP 703
SDV+SYG+V+ E+++ G +P
Sbjct: 185 YRKFTSASDVWSYGIVMWEVMSYGERP 211
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 97.4 bits (242), Expect = 2e-22
Identities = 71/221 (32%), Positives = 111/221 (50%), Gaps = 33/221 (14%)
Query: 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVC 564
+ +G G FG V+ G ++ +VAVK LK + FL E ++ L H LV+L+ V
Sbjct: 12 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVV 70
Query: 565 IEDNNRCLVYELIHNGSLESHLHGDD--KVNGP--LDWDARMKIALGAARGLAYLHEDSS 620
++ ++ E + GSL L D+ KV P +D+ A++ A G+AY+ +
Sbjct: 71 TKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQI------AEGMAYIERKN- 123
Query: 621 PRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD------EGNKHISTHVMGTFGYLAPE 674
IHRD +++N+L+ K++DFGLAR D EG K + APE
Sbjct: 124 --YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKF-------PIKWTAPE 174
Query: 675 YAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQEN 714
G +KSDV+S+G++L E++T G+ P PG N
Sbjct: 175 AINFGSFTIKSDVWSFGILLYEIVTYGKIPY-----PGMSN 210
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 97.8 bits (244), Expect = 3e-22
Identities = 63/213 (29%), Positives = 93/213 (43%), Gaps = 24/213 (11%)
Query: 499 NGFHTSRIIGEGGFGVVYRG-ILDDGREVAVKVLKRA--NQHGGREFLAELEMLSRLHHR 555
N + ++GEG +GVV + G VA+K K + ++ + L E+++L +L H
Sbjct: 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHE 60
Query: 556 NLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYL 615
N+V L LV+E + LE + G L DA + +AY
Sbjct: 61 NIVNLKEAFRRKGRLYLVFEYVERTLLELL----EASPGGLPPDAVRSYIWQLLQAIAYC 116
Query: 616 HEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEY 675
H S +IHRD K NIL+ K+ DFG AR ++ +V T Y APE
Sbjct: 117 H---SHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYV-ATRWYRAPE- 171
Query: 676 AMTGHLLVKS-------DVYSYGVVLLELLTGR 701
LLV DV++ G ++ ELL G
Sbjct: 172 -----LLVGDTNYGKPVDVWAIGCIMAELLDGE 199
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Score = 96.5 bits (240), Expect = 4e-22
Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 17/208 (8%)
Query: 506 IIGEGGFGVVYRGILDDGREVAVK--VLKRANQHGG----REFLAELEMLSRLHHRNLVK 559
++G+G +G VY G+ + G+ +AVK L +N + E+++L L H N+V+
Sbjct: 7 VLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQ 66
Query: 560 LFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDS 619
G C++DN + E + GS+ S L GPL K G+AYLH +
Sbjct: 67 YLGTCLDDNTISIFMEFVPGGSISSIL----NRFGPLPEPVFCKYTKQILDGVAYLHNNC 122
Query: 620 SPRVIHRDFKSSNILLEHDFTPKVSDFGLAR----TALDEGNKHISTHVMGTFGYLAPEY 675
V+HRD K +N++L + K+ DFG AR L + ++ + GT ++APE
Sbjct: 123 ---VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEV 179
Query: 676 AMTGHLLVKSDVYSYGVVLLELLTGRKP 703
KSD++S G + E+ TG+ P
Sbjct: 180 INESGYGRKSDIWSIGCTVFEMATGKPP 207
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 96.6 bits (240), Expect = 5e-22
Identities = 70/218 (32%), Positives = 105/218 (48%), Gaps = 25/218 (11%)
Query: 507 IGEGGFGVVYRGIL-----DDGREVAVKVLKRAN--QHGGREFLAELEMLSRLHHRNLVK 559
+GE FG +Y+G L D + VA+K LK N Q G EF E +++ LHH N+V
Sbjct: 13 LGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWG-EFQQEASLMAELHHPNIVC 71
Query: 560 LFGVCIEDNNRCLVYELIHNGSLESHL-----HGD--------DKVNGPLDWDARMKIAL 606
L GV ++ C+++E ++ G L L H D V LD + IA+
Sbjct: 72 LLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAI 131
Query: 607 GAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMG 666
A G+ YL SS +H+D + NIL+ K+SD GL+R + +
Sbjct: 132 QIAAGMEYL---SSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLL 188
Query: 667 TFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
++ PE M G SD++S+GVVL E+ + G +P
Sbjct: 189 PIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQP 226
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 95.8 bits (239), Expect = 6e-22
Identities = 60/201 (29%), Positives = 102/201 (50%), Gaps = 15/201 (7%)
Query: 506 IIGEGGFGVVYRGI-LDDGREVAVKVL--KRANQHGGREFLAELEMLSRLHHRNLVKLFG 562
+GEG +G VY+ I + G+ VA+KV+ + Q E + E+ +L + +VK +G
Sbjct: 10 KLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQ----EIIKEISILKQCDSPYIVKYYG 65
Query: 563 VCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPR 622
++ + +V E GS+ + +K L + I +GL YLH S +
Sbjct: 66 SYFKNTDLWIVMEYCGAGSVSDIMKITNK---TLTEEEIAAILYQTLKGLEYLH---SNK 119
Query: 623 VIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLL 682
IHRD K+ NILL + K++DFG++ L + +T V+GT ++APE
Sbjct: 120 KIHRDIKAGNILLNEEGQAKLADFGVS-GQLTDTMAKRNT-VIGTPFWMAPEVIQEIGYN 177
Query: 683 VKSDVYSYGVVLLELLTGRKP 703
K+D++S G+ +E+ G+ P
Sbjct: 178 NKADIWSLGITAIEMAEGKPP 198
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 96.3 bits (240), Expect = 7e-22
Identities = 65/219 (29%), Positives = 96/219 (43%), Gaps = 13/219 (5%)
Query: 499 NGFHTSRIIGEGGFGVVYRGILDDGREV-AVK-VLKRANQHGGREFLAELEMLSRLHHRN 556
+GEG G V + L + + A+K + N ++ L ELE+
Sbjct: 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPY 60
Query: 557 LVKLFGVCIE--DNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAY 614
+VK +G ++ ++ + E GSL+S K G + KIA +GL+Y
Sbjct: 61 IVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSY 120
Query: 615 LHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPE 674
LH ++IHRD K SNILL K+ DFG++ N T GT Y+APE
Sbjct: 121 LHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGEL---VNSLAGTFT-GTSFYMAPE 173
Query: 675 YAMTGHLLVKSDVYSYGVVLLELLTGRKPV--DLSQPPG 711
+ SDV+S G+ LLE+ R P + P G
Sbjct: 174 RIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLG 212
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 96.9 bits (241), Expect = 7e-22
Identities = 70/239 (29%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 507 IGEGGFGVVYRGILDDGRE-----------------VAVKVLK-RANQHGGREFLAELEM 548
+GEG FG V+ + + ++ VAVK+L+ AN++ +FL E+++
Sbjct: 13 LGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKI 72
Query: 549 LSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLE---SHLHGDDKV---------NGPL 596
LSRL N+++L GVC++++ C++ E + NG L S H DDK L
Sbjct: 73 LSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCL 132
Query: 597 ---DWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTAL 653
+ + + +AL A G+ YL SS +HRD + N L+ + T K++DFG++R
Sbjct: 133 PAISYSSLLHVALQIASGMKYL---SSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLY 189
Query: 654 DEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQ 712
I + ++A E + G SDV+++GV L E+L + QP G+
Sbjct: 190 AGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILM----LCKEQPYGE 244
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 95.8 bits (238), Expect = 1e-21
Identities = 69/207 (33%), Positives = 106/207 (51%), Gaps = 21/207 (10%)
Query: 505 RIIGEGGFGVVYRGILD-----DGREVAVKVLKRANQHGGR---EFLAELEMLSRLHHRN 556
R +GEG FG V D G +VAVK LK + GG + E+E+L L+H N
Sbjct: 10 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHEN 67
Query: 557 LVKLFGVCIEDNNRC--LVYELIHNGSLESHL-HGDDKVNGPLDWDARMKIALGAARGLA 613
+VK G+C ED L+ E + +GSL+ +L +K+N ++K A+ +G+
Sbjct: 68 IVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKIN----LKQQLKYAVQICKGMD 123
Query: 614 YLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLART-ALDEGNKHISTHVMGTFGYLA 672
YL S + +HRD + N+L+E + K+ DFGL + D+ + + + A
Sbjct: 124 YL---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYA 180
Query: 673 PEYAMTGHLLVKSDVYSYGVVLLELLT 699
PE + + SDV+S+GV L ELLT
Sbjct: 181 PECLIQSKFYIASDVWSFGVTLYELLT 207
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 95.4 bits (237), Expect = 1e-21
Identities = 67/210 (31%), Positives = 107/210 (50%), Gaps = 21/210 (10%)
Query: 505 RIIGEGGFGVVYRGILD-DGRE---VAVKVLKRANQHGGR-EFLAELEMLSRLHHRNLVK 559
++IG G FG V+RGIL GR+ VA+K LK R +FL+E ++ + H N+++
Sbjct: 11 KVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIR 70
Query: 560 LFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDS 619
L GV + ++ E + NG+L+ +L D ++ G A G+ YL S
Sbjct: 71 LEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLR---GIAAGMKYL---S 124
Query: 620 SPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFG-----YLAPE 674
+HRD + NIL+ + KVSDFGL+R D+ +T + G + APE
Sbjct: 125 DMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTT----SGGKIPIRWTAPE 180
Query: 675 YAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
SDV+S+G+V+ E+++ G +P
Sbjct: 181 AIAYRKFTSASDVWSFGIVMWEVMSFGERP 210
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 95.1 bits (237), Expect = 1e-21
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 500 GFHTSRIIGEGGFGVVYRGILDDGREV-AVKVLKRAN---QHGGREFLAELEMLSRLHHR 555
F R+IG+G FG V D +++ A+K + + + R L E +L L+H
Sbjct: 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHP 60
Query: 556 NLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGA-ARGLAY 614
LV L+ ++ N LV +L+ G L HL K + + ++K + L Y
Sbjct: 61 FLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFS-----EEQVKFWICEIVLALEY 115
Query: 615 LHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPE 674
LH S +IHRD K NILL+ ++DF +A + +T GT GY+APE
Sbjct: 116 LH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTL---TTSTSGTPGYMAPE 169
Query: 675 YAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
V D +S GV E L G++P
Sbjct: 170 VLCRQGYSVAVDWWSLGVTAYECLRGKRP 198
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Score = 95.7 bits (238), Expect = 1e-21
Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 28/218 (12%)
Query: 507 IGEGGFGVVY----RGILDDGRE-------------VAVKVLKR-ANQHGGREFLAELEM 548
+GEG FG V+ G+ + VAVK+L+ AN++ +FL E+++
Sbjct: 13 LGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKI 72
Query: 549 LSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDAR------- 601
+SRL N+++L VCI + C++ E + NG L L + D
Sbjct: 73 MSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTL 132
Query: 602 MKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIS 661
+ +A A G+ YL SS +HRD + N L+ ++T K++DFG++R I
Sbjct: 133 IFMATQIASGMKYL---SSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQ 189
Query: 662 THVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT 699
+ +++ E + G SDV+++GV L E+LT
Sbjct: 190 GRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILT 227
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 94.7 bits (235), Expect = 2e-21
Identities = 71/200 (35%), Positives = 108/200 (54%), Gaps = 13/200 (6%)
Query: 507 IGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIE 566
+G+G FG V+ G + +VA+K LK FL E +++ +L H LV L+ V E
Sbjct: 14 LGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMP-EAFLQEAQIMKKLRHDKLVPLYAVVSE 72
Query: 567 DNNRCLVYELIHNGSLESHL-HGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIH 625
+ +V E + GSL L GD K L + +A A G+AY+ + IH
Sbjct: 73 EPIY-IVTEFMGKGSLLDFLKEGDGKY---LKLPQLVDMAAQIADGMAYIERMN---YIH 125
Query: 626 RDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTH-VMGTFGYLAPEYAMTGHLLVK 684
RD +++NIL+ + K++DFGLAR L E N++ + + APE A+ G +K
Sbjct: 126 RDLRAANILVGDNLVCKIADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 183
Query: 685 SDVYSYGVVLLELLT-GRKP 703
SDV+S+G++L EL+T GR P
Sbjct: 184 SDVWSFGILLTELVTKGRVP 203
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 95.2 bits (237), Expect = 2e-21
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 27/216 (12%)
Query: 506 IIGEGGFGVV----YRGILDDGRE--VAVKVLK-RANQHGGREFLAELEMLSRL-HHRNL 557
+GEG FG V G+ + VAVK+LK A + + ++E+EM+ + H+N+
Sbjct: 19 PLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNI 78
Query: 558 VKLFGVCIEDNNRCLVYELIHNGSLESHLH------------GDDKVNGPLDWDARMKIA 605
+ L GVC ++ +V E +G+L L L + A
Sbjct: 79 INLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFA 138
Query: 606 LGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLART--ALDEGNKHISTH 663
ARG+ +L +S + IHRD + N+L+ D K++DFGLAR +D K +
Sbjct: 139 YQVARGMEFL---ASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGR 195
Query: 664 VMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT 699
+ ++APE +SDV+S+GV+L E+ T
Sbjct: 196 L--PVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFT 229
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 94.1 bits (234), Expect = 3e-21
Identities = 73/229 (31%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 505 RIIGEGGFGVVYRGIL--DDGR--EVAVKVLKRANQHGGRE---FLAELEMLSRLHHRNL 557
+I+GEG FG V G L DDG +VAVK +K H E FL+E + H N+
Sbjct: 5 KILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDI-HTYSEIEEFLSEAACMKDFDHPNV 63
Query: 558 VKLFGVCIEDNNR------CLVYELIHNGSLESHLH----GDDKVNGPLDWDARMKIALG 607
+KL GVC E ++ ++ + +G L S L G PL +K +
Sbjct: 64 MKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQ--TLLKFMVD 121
Query: 608 AARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGT 667
A G+ YL S+ IHRD + N +L D T V+DFGL++ + G+ + +
Sbjct: 122 IALGMEYL---SNRNFIHRDLAARNCMLREDMTVCVADFGLSKK-IYSGDYYRQGRIAKM 177
Query: 668 -FGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQEN 714
++A E KSDV+++GV + E+ T G+ P PG EN
Sbjct: 178 PVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPY-----PGVEN 221
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Score = 94.0 bits (234), Expect = 4e-21
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 11/211 (5%)
Query: 498 TNGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLK---RANQHGGREFLAELEMLSRLH 553
F + IG+G F VVY+ I L DGR VA+K ++ + ++ L E+++L +L
Sbjct: 1 LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD 60
Query: 554 HRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLA 613
H N++K IE+N +V EL G L + K + K + L
Sbjct: 61 HPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALE 120
Query: 614 YLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTH-VMGTFGYLA 672
++H S R++HRD K +N+ + K+ D GL R +K + H ++GT Y++
Sbjct: 121 HMH---SKRIMHRDIKPANVFITATGVVKLGDLGLGRFF---SSKTTAAHSLVGTPYYMS 174
Query: 673 PEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
PE KSD++S G +L E+ + P
Sbjct: 175 PERIHENGYNFKSDIWSLGCLLYEMAALQSP 205
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 93.7 bits (233), Expect = 4e-21
Identities = 62/218 (28%), Positives = 109/218 (50%), Gaps = 19/218 (8%)
Query: 505 RIIGEGGFG--VVYRGILDDGREVAVKV-LKRANQHGGREFLAELEMLSRLHHRNLVKLF 561
R++G+G FG +YR DD V +V L R ++ R+ L E+ +LS L H N++ +
Sbjct: 6 RVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYY 65
Query: 562 GVCIEDNNRCLVYELIHNGSL-ESHLHGDDKVNGPLDWDARMKIAL--GAARGLAYLHED 618
++DN + E + G+L + + ++ ++ M + ++Y+H+
Sbjct: 66 NHFMDDNTLLIEMEYANGGTLYDKIVRQKGQL-----FEEEMVLWYLFQIVSAVSYIHKA 120
Query: 619 SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMT 678
++HRD K+ NI L K+ DFG+++ E ++ V+GT Y++PE
Sbjct: 121 G---ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSE--YSMAETVVGTPYYMSPELCQG 175
Query: 679 GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLV 716
KSD+++ G VL ELLT ++ D + P NLV
Sbjct: 176 VKYNFKSDIWALGCVLYELLTLKRTFDATNPL---NLV 210
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 93.3 bits (232), Expect = 5e-21
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 18/208 (8%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLK--RANQHGGREFLA---ELEMLSRLHHRNLV 558
+++G+G FG VY +D GRE+AVK + + +E A E+++L L H +V
Sbjct: 8 KLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIV 67
Query: 559 KLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHED 618
+ +G +D + E + GS++ L K G L K G+ YLH
Sbjct: 68 QYYGCLRDDETLSIFMEYMPGGSVKDQL----KAYGALTETVTRKYTRQILEGVEYLH-- 121
Query: 619 SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIS--THVMGTFGYLAPEYA 676
S ++HRD K +NIL + K+ DFG A L + V GT +++PE
Sbjct: 122 -SNMIVHRDIKGANILRDSAGNVKLGDFG-ASKRLQTICSSGTGMKSVTGTPYWMSPE-V 178
Query: 677 MTGHLL-VKSDVYSYGVVLLELLTGRKP 703
++G K+DV+S G ++E+LT + P
Sbjct: 179 ISGEGYGRKADVWSVGCTVVEMLTEKPP 206
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 93.3 bits (232), Expect = 6e-21
Identities = 61/211 (28%), Positives = 104/211 (49%), Gaps = 20/211 (9%)
Query: 506 IIGEGGFGVVYRGI-LDDGREVAVKVLK----RANQHGGRE------FLAELEMLSRLHH 554
+IG+G +G VY + + G +AVK ++ A +H R+ +E+E L L H
Sbjct: 8 LIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDH 67
Query: 555 RNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAY 614
N+V+ G + + E + GS+ S L + G + GLAY
Sbjct: 68 LNIVQYLGFETTEEYLSIFLEYVPGGSIGSCL----RTYGRFEEQLVRFFTEQVLEGLAY 123
Query: 615 LHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPE 674
LH S ++HRD K+ N+L++ D K+SDFG+++ + D + + + G+ ++APE
Sbjct: 124 LH---SKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPE 180
Query: 675 YAMTGH--LLVKSDVYSYGVVLLELLTGRKP 703
+ K D++S G V+LE+ GR+P
Sbjct: 181 VIHSYSQGYSAKVDIWSLGCVVLEMFAGRRP 211
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 93.1 bits (232), Expect = 6e-21
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 9/205 (4%)
Query: 506 IIGEGGFGVVYRGI-LDDGREVAVKVLK--RANQHGGREFLAELEMLSRLHHRNLVKLFG 562
IG+G FG V + DG+ + K + + ++ ++E+ +L L H N+V+ +
Sbjct: 7 TIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYD 66
Query: 563 VCIEDNNRCL--VYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLH--ED 618
I+ +N+ L V E G L + K ++ + +I L H D
Sbjct: 67 RIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSD 126
Query: 619 SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMT 678
V+HRD K +NI L+ + K+ DFGLA+ L + T+V GT Y++PE
Sbjct: 127 PGNTVLHRDLKPANIFLDANNNVKLGDFGLAKI-LGHDSSFAKTYV-GTPYYMSPEQLNH 184
Query: 679 GHLLVKSDVYSYGVVLLELLTGRKP 703
KSD++S G ++ EL P
Sbjct: 185 MSYDEKSDIWSLGCLIYELCALSPP 209
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 93.9 bits (233), Expect = 7e-21
Identities = 63/217 (29%), Positives = 109/217 (50%), Gaps = 27/217 (12%)
Query: 507 IGEGGFGVVY----RGILD---------DGRE--VAVKVLKR-ANQHGGREFLAELEMLS 550
+GEG FG V+ G+ + DG+ VAVK+L+ + +FL E++++S
Sbjct: 13 LGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMS 72
Query: 551 RLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDD-------KVNGP-LDWDARM 602
RL + N+++L GVC+ D+ C++ E + NG L L + N P + +
Sbjct: 73 RLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLL 132
Query: 603 KIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIST 662
+A+ A G+ YL +S +HRD + N L+ + +T K++DFG++R I
Sbjct: 133 YMAVQIASGMKYL---ASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQG 189
Query: 663 HVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT 699
+ ++A E + G SDV+++GV L E+ T
Sbjct: 190 RAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFT 226
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 92.7 bits (231), Expect = 8e-21
Identities = 68/215 (31%), Positives = 102/215 (47%), Gaps = 33/215 (15%)
Query: 507 IGEGGFGVVYRGILDDGREV-AVKVLKRANQHGGREF---LAELEMLSRLHHRNLVKLFG 562
I +G +G V+ ++ A+KV+K+A+ + L E ++LS+ +VKL+
Sbjct: 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYY 60
Query: 563 VCIEDNNRCLVYELIHNGSLESHLHGDDKVN-GPLDWD-ARMKIALGAARGLAYLHEDSS 620
N LV E + G L S L N G LD D AR+ IA L YLH S
Sbjct: 61 SFQGKKNLYLVMEYLPGGDLASLLE-----NVGSLDEDVARIYIAEIVL-ALEYLH---S 111
Query: 621 PRVIHRDFKSSNILLEHDFTPKVSDFGLARTAL-------DEGNKHISTHVMGTFGYLAP 673
+IHRD K NIL++ + K++DFGL++ L ++ K ++GT Y+AP
Sbjct: 112 NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKR-IVGTPDYIAP 170
Query: 674 EYAMTGHLLVKS-----DVYSYGVVLLELLTGRKP 703
E +L + D +S G +L E L G P
Sbjct: 171 EV-----ILGQGHSKTVDWWSLGCILYEFLVGIPP 200
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 93.4 bits (232), Expect = 9e-21
Identities = 68/225 (30%), Positives = 102/225 (45%), Gaps = 29/225 (12%)
Query: 505 RIIGEGGFGVVYR----GILDDGRE--VAVKVLKR-ANQHGGREFLAELEMLSRLHHRNL 557
R IG+G FG V++ G+L VAVK+LK A+ +F E +++ H N+
Sbjct: 11 RDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNI 70
Query: 558 VKLFGVCIEDNNRCLVYELIHNGSL------------ESHLHGDDKVNG------PLDWD 599
VKL GVC CL++E + G L S H PL
Sbjct: 71 VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCT 130
Query: 600 ARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH 659
++ IA A G+AYL E + +HRD + N L+ + K++DFGL+R
Sbjct: 131 EQLCIAKQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 187
Query: 660 ISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
S + ++ PE +SDV++YGVVL E+ + G +P
Sbjct: 188 ASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQP 232
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 93.3 bits (232), Expect = 1e-20
Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 13/203 (6%)
Query: 505 RIIGEGGFGVVYRGIL------DDGREVAVKVLKRANQHGGREFL-AELEMLSRL-HHRN 556
+ +G G FG V D +VAVK+LK RE L +EL+++S L +H N
Sbjct: 41 KTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHEN 100
Query: 557 LVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLH 616
+V L G C ++ E G L + L K L + + + A+G+A+L
Sbjct: 101 IVNLLGACTIGGPILVITEYCCYGDLLNFLR--RKRESFLTLEDLLSFSYQVAKGMAFL- 157
Query: 617 EDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYA 676
+S IHRD + N+LL H K+ DFGLAR +++ N + + ++APE
Sbjct: 158 --ASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESI 215
Query: 677 MTGHLLVKSDVYSYGVVLLELLT 699
+SDV+SYG++L E+ +
Sbjct: 216 FNCVYTFESDVWSYGILLWEIFS 238
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 92.9 bits (231), Expect = 1e-20
Identities = 54/169 (31%), Positives = 87/169 (51%), Gaps = 10/169 (5%)
Query: 540 REFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWD 599
++ L EL+++ +V +G + +NN C+ E + GSL+ K GP+ +
Sbjct: 48 KQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLD----RIYKKGGPIPVE 103
Query: 600 ARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH 659
KIA+ GL YL+ R++HRD K SNIL+ K+ DFG++ ++
Sbjct: 104 ILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS---- 157
Query: 660 ISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQ 708
I+ +GT Y++PE G VKSDV+S G+ ++EL G+ P S
Sbjct: 158 IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSN 206
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 92.5 bits (230), Expect = 1e-20
Identities = 74/209 (35%), Positives = 98/209 (46%), Gaps = 30/209 (14%)
Query: 507 IGEGGFGVV----YRGILDD-GREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLF 561
+G+G FG V Y + D+ G VAVK L+ + R+F E+E+L L H N+VK
Sbjct: 12 LGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYK 71
Query: 562 GVCIE--DNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDS 619
GVC N LV E + GSL +L K LD + A +G+ YL
Sbjct: 72 GVCYSAGRRNLRLVMEYLPYGSLRDYL---QKHRERLDHRKLLLYASQICKGMEYL---G 125
Query: 620 SPRVIHRDFKSSNILLEHDFTPKVSDFGLAR---------TALDEGNKHISTHVMGTFGY 670
S R +HRD + NIL+E + K+ DFGL + + G I F Y
Sbjct: 126 SKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPI-------FWY 178
Query: 671 LAPEYAMTGHLLVKSDVYSYGVVLLELLT 699
APE V SDV+S+GVVL EL T
Sbjct: 179 -APESLTESKFSVASDVWSFGVVLYELFT 206
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 91.1 bits (226), Expect = 3e-20
Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 21/206 (10%)
Query: 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVC 564
+ +G G FGVV+ G +VA+K + +F+ E +++ +L H LV+L+GVC
Sbjct: 10 KELGSGQFGVVHLGKWRAQIKVAIKAI-NEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVC 68
Query: 565 IEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVI 624
+ +V E + NG L ++L + G L D + + G+ YL +S I
Sbjct: 69 TQQKPLYIVTEFMENGCLLNYLR---QRQGKLSKDMLLSMCQDVCEGMEYLERNS---FI 122
Query: 625 HRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFG------YLAPEYAMT 678
HRD + N L+ KVSDFG+ R LD+ ++ S + G + PE
Sbjct: 123 HRDLAARNCLVSSTGVVKVSDFGMTRYVLDD--EYTS-----SSGAKFPVKWSPPEVFNF 175
Query: 679 GHLLVKSDVYSYGVVLLELLT-GRKP 703
KSDV+S+GV++ E+ T G+ P
Sbjct: 176 SKYSSKSDVWSFGVLMWEVFTEGKMP 201
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 91.1 bits (227), Expect = 3e-20
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 16/201 (7%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKV--LKRANQHGGREFLA-ELEMLSRLHHRNLVKLFG 562
IG+G FG VY+ I + VA+KV L+ A E + E++ LS+ + K +G
Sbjct: 9 IGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDE--IEDIQQEIQFLSQCRSPYITKYYG 66
Query: 563 VCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPR 622
++ + ++ E GS L G LD I GL YLHE+
Sbjct: 67 SFLKGSKLWIIMEYCGGGSCLDLLK-----PGKLDETYIAFILREVLLGLEYLHEE---G 118
Query: 623 VIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLL 682
IHRD K++NILL + K++DFG++ L +T V GT ++APE
Sbjct: 119 KIHRDIKAANILLSEEGDVKLADFGVS-GQLTSTMSKRNTFV-GTPFWMAPEVIKQSGYD 176
Query: 683 VKSDVYSYGVVLLELLTGRKP 703
K+D++S G+ +EL G P
Sbjct: 177 EKADIWSLGITAIELAKGEPP 197
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 91.6 bits (227), Expect = 3e-20
Identities = 66/222 (29%), Positives = 106/222 (47%), Gaps = 30/222 (13%)
Query: 505 RIIGEGGFGVVYRGILDD--GR----EVAVKVLKR-ANQHGGREFLAELEMLSRLHHRNL 557
+ +GEG FG V + GR VAVK+LK A+ R+ L+E +L +++H ++
Sbjct: 6 KTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHV 65
Query: 558 VKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKV------------NGPLDWDARMKIA 605
+KL+G C +D L+ E GSL S L KV + LD +
Sbjct: 66 IKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALT 125
Query: 606 LG--------AARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN 657
+G +RG+ YL E ++HRD + N+L+ K+SDFGL+R +E +
Sbjct: 126 MGDLISFAWQISRGMQYLAEMK---LVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDS 182
Query: 658 KHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT 699
+ ++A E +SDV+S+GV+L E++T
Sbjct: 183 YVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 224
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 91.0 bits (226), Expect = 5e-20
Identities = 69/224 (30%), Positives = 103/224 (45%), Gaps = 22/224 (9%)
Query: 505 RIIGEGGFGVVY----RGILDDGREVAVKVLKR---ANQHGGREFLAELEMLSRLHHRNL 557
R +G G FG VY RG D E+ V V ++ +FL E ++S+ +H+N+
Sbjct: 12 RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNI 71
Query: 558 VKLFGVCIEDNNRCLVYELIHNGSLESHL-HGDDKVNGP--LDWDARMKIALGAARGLAY 614
V+L GV E R ++ EL+ G L+S L + P L + A A+G Y
Sbjct: 72 VRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKY 131
Query: 615 LHEDSSPRVIHRDFKSSNILLEH---DFTPKVSDFGLARTALDEGNKHISTHVMGTFGYL 671
L E+ IHRD + N LL K++DFG+AR M ++
Sbjct: 132 LEEN---HFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWM 188
Query: 672 APEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQEN 714
PE + G K+DV+S+GV+L E+ + G P PG+ N
Sbjct: 189 PPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPY-----PGRTN 227
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 90.6 bits (225), Expect = 6e-20
Identities = 67/206 (32%), Positives = 101/206 (49%), Gaps = 14/206 (6%)
Query: 504 SRIIGEGGFGVVYRGIL----DDGREVAVKVLKRANQHGGRE-FLAELEMLSRLHHRNLV 558
R IGEG FG VY+G+ ++ VAVK K RE FL E ++ + H ++V
Sbjct: 11 GRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIV 70
Query: 559 KLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHED 618
KL GV +N +V EL G L S+L LD + + + + LAYL
Sbjct: 71 KLIGVI-TENPVWIVMELAPLGELRSYL---QVNKYSLDLASLILYSYQLSTALAYLE-- 124
Query: 619 SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMT 678
S R +HRD + N+L+ K+ DFGL+R L++ + + ++ ++APE
Sbjct: 125 -SKRFVHRDIAARNVLVSSPDCVKLGDFGLSR-YLEDESYYKASKGKLPIKWMAPESINF 182
Query: 679 GHLLVKSDVYSYGVVLLELLT-GRKP 703
SDV+ +GV + E+L G KP
Sbjct: 183 RRFTSASDVWMFGVCMWEILMLGVKP 208
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 90.5 bits (224), Expect = 6e-20
Identities = 65/218 (29%), Positives = 108/218 (49%), Gaps = 16/218 (7%)
Query: 495 EKATNGFHTSRIIGEGGFGVVY----RGILDDGRE--VAVKVLKRANQHGGR-EFLAELE 547
E A SR +G+G FG+VY +G++ D E VA+K + A R EFL E
Sbjct: 2 EVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 61
Query: 548 MLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHG------DDKVNGPLDWDAR 601
++ + ++V+L GV + ++ EL+ G L+S+L ++ V P
Sbjct: 62 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKM 121
Query: 602 MKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIS 661
+++A A G+AYL+ + + +HRD + N ++ DFT K+ DFG+ R +
Sbjct: 122 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 178
Query: 662 THVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT 699
+ +++PE G SDV+S+GVVL E+ T
Sbjct: 179 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 216
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 89.4 bits (222), Expect = 2e-19
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 17/207 (8%)
Query: 506 IIGE---GGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLF 561
IIGE G FG VY+ + G A K+++ ++ +F+ E+++LS H N+V L+
Sbjct: 9 IIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLY 68
Query: 562 GVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSP 621
+N ++ E G+L+S + ++ L + L +LH
Sbjct: 69 EAYFYENKLWILIEFCDGGALDSIM---LELERGLTEPQIRYVCRQMLEALNFLHSH--- 122
Query: 622 RVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHL 681
+VIHRD K+ NILL D K++DFG++ K T + GT ++APE
Sbjct: 123 KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKR-DTFI-GTPYWMAPEVVACETF 180
Query: 682 L-----VKSDVYSYGVVLLELLTGRKP 703
K+D++S G+ L+EL P
Sbjct: 181 KDNPYDYKADIWSLGITLIELAQMEPP 207
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 88.8 bits (220), Expect = 2e-19
Identities = 69/210 (32%), Positives = 103/210 (49%), Gaps = 21/210 (10%)
Query: 505 RIIGEGGFGVVYRGILD--DGRE--VAVKVLKRA-NQHGGREFLAELEMLSRLHHRNLVK 559
++IG G FG V G L RE VA+K LK + R+FL+E ++ + H N++
Sbjct: 10 KVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIH 69
Query: 560 LFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDS 619
L GV + +V E + NGSL++ L D G + + G A G+ YL S
Sbjct: 70 LEGVVTKSKPVMIVTEYMENGSLDAFLRKHD---GQFTVIQLVGMLRGIASGMKYL---S 123
Query: 620 SPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFG-----YLAPE 674
+HRD + NIL+ + KVSDFGL+R D+ +T G + APE
Sbjct: 124 DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTT----RGGKIPIRWTAPE 179
Query: 675 YAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
SDV+SYG+V+ E+++ G +P
Sbjct: 180 AIAYRKFTSASDVWSYGIVMWEVMSYGERP 209
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Score = 89.3 bits (222), Expect = 2e-19
Identities = 65/230 (28%), Positives = 103/230 (44%), Gaps = 28/230 (12%)
Query: 495 EKATNGFHTSRIIGEGGFGVVY-------RGILDDG----------REVAVKVLKR-ANQ 536
E + +GEG FG V+ + + VAVKVL+ A+
Sbjct: 1 EFPRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD 60
Query: 537 HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLH------GDD 590
+ +FL E+++LSRL N+ +L GVC D C++ E + NG L L
Sbjct: 61 NAREDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGL 120
Query: 591 KVNGP-LDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLA 649
N L + + +A A G+ YL S +HRD + N L+ ++T K++DFG++
Sbjct: 121 ACNSKSLSFSTLLYMATQIASGMRYL---ESLNFVHRDLATRNCLVGKNYTIKIADFGMS 177
Query: 650 RTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT 699
R + ++A E + G KSDV+++GV L E+LT
Sbjct: 178 RNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILT 227
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 89.0 bits (220), Expect = 3e-19
Identities = 67/211 (31%), Positives = 113/211 (53%), Gaps = 20/211 (9%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKV-LKRANQHGGR----EFLAELEMLSRLHHRNLV 558
+++G G FG VY+GI + +G V + V +K N+ G EF+ E +++ + H +LV
Sbjct: 13 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 72
Query: 559 KLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGP---LDWDARMKIALGAARGLAYL 615
+L GVC+ + LV +L+ +G L ++H G L+W ++ A+G+ YL
Sbjct: 73 RLLGVCLSPTIQ-LVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQI------AKGMMYL 125
Query: 616 HEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEY 675
E R++HRD + N+L++ K++DFGLAR + ++ + ++A E
Sbjct: 126 EER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 182
Query: 676 AMTGHLLVKSDVYSYGVVLLELLT-GRKPVD 705
+SDV+SYGV + EL+T G KP D
Sbjct: 183 IHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 213
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 88.3 bits (219), Expect = 4e-19
Identities = 64/202 (31%), Positives = 97/202 (48%), Gaps = 14/202 (6%)
Query: 507 IGEGGFGVVYR-GILDDGREVAVKVL--KRANQHGGREF-LAELEMLSRLHHRNLVKLFG 562
+G+GGFG V + G+ A K L KR + G + L E ++L ++ R +V L
Sbjct: 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAY 60
Query: 563 VCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKI-ALGAARGLAYLHEDSSP 621
++ CLV L++ G L+ H++ V P +AR A GL +LH+
Sbjct: 61 AFETKDDLCLVMTLMNGGDLKYHIY---NVGEPGFPEARAIFYAAQIICGLEHLHQR--- 114
Query: 622 RVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHL 681
R+++RD K N+LL+ ++SD GLA L G K GT GY+APE
Sbjct: 115 RIVYRDLKPENVLLDDHGNVRISDLGLA-VELKGGKK--IKGRAGTPGYMAPEVLQGEVY 171
Query: 682 LVKSDVYSYGVVLLELLTGRKP 703
D ++ G L E++ GR P
Sbjct: 172 DFSVDWFALGCTLYEMIAGRSP 193
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Score = 89.2 bits (222), Expect = 4e-19
Identities = 75/216 (34%), Positives = 108/216 (50%), Gaps = 41/216 (18%)
Query: 507 IGEGGFGVVYRGILDDGRE-VAVKVLKRA--N----QHGGRE--FLAELEMLSRLHHRNL 557
+G+G +G+V++ I +E VA+K + A N Q RE FL EL H N+
Sbjct: 15 LGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELG-----DHPNI 69
Query: 558 VKLFGVCIEDNNR--CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYL 615
VKL V +N++ LV+E + E+ LH + N D R I + L Y+
Sbjct: 70 VKLLNVIKAENDKDIYLVFEYM-----ETDLHAVIRANILEDVHKRY-IMYQLLKALKYI 123
Query: 616 HEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLART--ALDEGNKH-ISTHVMGTFGYLA 672
H S VIHRD K SNILL D K++DFGLAR+ L+E ++ + T + T Y A
Sbjct: 124 H---SGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRA 180
Query: 673 PEYAMTGHLLVKSDVYSYGV-------VLLELLTGR 701
PE +L+ S Y+ GV +L E+L G+
Sbjct: 181 PE------ILLGSTRYTKGVDMWSVGCILGEMLLGK 210
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 87.8 bits (218), Expect = 5e-19
Identities = 64/202 (31%), Positives = 97/202 (48%), Gaps = 9/202 (4%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKLFGVC 564
IG G VVY I L + +VA+K + Q E E++ +S+ +H N+VK +
Sbjct: 9 IGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSF 68
Query: 565 IEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVI 624
+ + LV + GSL + G LD + +GL YLH S I
Sbjct: 69 VVGDELWLVMPYLSGGSL-LDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLH---SNGQI 124
Query: 625 HRDFKSSNILLEHDFTPKVSDFGLARTALDEG-NKHISTH-VMGTFGYLAPEYAMTGH-L 681
HRD K+ NILL D + K++DFG++ + D G +GT ++APE H
Sbjct: 125 HRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGY 184
Query: 682 LVKSDVYSYGVVLLELLTGRKP 703
K+D++S+G+ +EL TG P
Sbjct: 185 DFKADIWSFGITAIELATGAAP 206
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 88.6 bits (220), Expect = 8e-19
Identities = 68/214 (31%), Positives = 104/214 (48%), Gaps = 34/214 (15%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRA--NQHGGREFLAELEMLSRLHHRNLVKLFGV 563
IG G +G+V + +VA+K + A N+ + L E+++L L H N++ + +
Sbjct: 13 IGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDI 72
Query: 564 CIEDNNR------CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHE 617
+ +R +VYEL +++ LH + + L D RGL Y+H
Sbjct: 73 -MPPPHREAFNDVYIVYEL-----MDTDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIH- 125
Query: 618 DSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAM 677
S V+HRD K SN+LL + K+ DFGLART ++G+ T + T Y APE
Sbjct: 126 --SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGD--FMTEYVVTRWYRAPE--- 178
Query: 678 TGHLLVKS-------DVYSYGVVLLELLTGRKPV 704
LL+ DV+S G + ELL GRKP+
Sbjct: 179 ---LLLNCSEYTTAIDVWSVGCIFAELL-GRKPL 208
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 86.6 bits (214), Expect = 9e-19
Identities = 69/216 (31%), Positives = 111/216 (51%), Gaps = 24/216 (11%)
Query: 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVC 564
+ +G G FG V+ + +VAVK +K + FLAE ++ L H LVKL V
Sbjct: 12 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAVV 70
Query: 565 IEDNNRCLVYELIHNGSLESHLHGDDKVNGPL----DWDARMKIALGAARGLAYLHEDSS 620
++ ++ E + GSL L D+ PL D+ A++ A G+A++ + +
Sbjct: 71 TKEPIY-IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI------AEGMAFIEQRN- 122
Query: 621 PRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTH-VMGTFGYLAPEYAMTG 679
IHRD +++NIL+ K++DFGLAR + E N++ + + APE G
Sbjct: 123 --YIHRDLRAANILVSASLVCKIADFGLAR--VIEDNEYTAREGAKFPIKWTAPEAINFG 178
Query: 680 HLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQEN 714
+KSDV+S+G++L+E++T GR P PG N
Sbjct: 179 SFTIKSDVWSFGILLMEIVTYGRIPY-----PGMSN 209
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Score = 87.7 bits (217), Expect = 1e-18
Identities = 67/213 (31%), Positives = 100/213 (46%), Gaps = 27/213 (12%)
Query: 506 IIGEGGFGVVYRG-ILDDG--REVAVKVLKR-ANQHGGREFLAELEMLSRL-HHRNLVKL 560
+IGEG FG V + I DG + A+K +K A++ R+F ELE+L +L HH N++ L
Sbjct: 14 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 73
Query: 561 FGVCIEDNNRCLVYELIHNGSLESHLHGD------------DKVNGPLDWDARMKIALGA 608
G C L E +G+L L + L + A
Sbjct: 74 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 133
Query: 609 ARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTF 668
ARG+ YL S + IHRD + NIL+ ++ K++DFGL+R G + MG
Sbjct: 134 ARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR-----GQEVYVKKTMGRL 185
Query: 669 G--YLAPEYAMTGHLLVKSDVYSYGVVLLELLT 699
++A E SDV+SYGV+L E+++
Sbjct: 186 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 218
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 86.8 bits (215), Expect = 1e-18
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 505 RIIGEGGFGVVY--RGILDDGREVAVKVLKRANQHGG------REFLAELEMLSRLHHRN 556
+ +G G F Y R + G +AVK + E+ +++RL+H +
Sbjct: 6 QQLGTGAFSSCYQARDVKT-GTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPH 64
Query: 557 LVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLH 616
++++ G ED++ L E + GS+ L G + RGL+YLH
Sbjct: 65 IIRMLGATCEDSHFNLFVEWMAGGSVSHLLSK----YGAFKEAVIINYTEQLLRGLSYLH 120
Query: 617 EDSSPRVIHRDFKSSNILLE---HDFTPKVSDFGLA--RTALDEGNKHISTHVMGTFGYL 671
E+ ++IHRD K +N+L++ +++DFG A A G ++GT ++
Sbjct: 121 EN---QIIHRDVKGANLLIDSTGQRL--RIADFGAAARLAAKGTGAGEFQGQLLGTIAFM 175
Query: 672 APEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
APE DV+S G V++E+ T + P
Sbjct: 176 APEVLRGEQYGRSCDVWSVGCVIIEMATAKPP 207
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 86.9 bits (215), Expect = 1e-18
Identities = 79/284 (27%), Positives = 129/284 (45%), Gaps = 32/284 (11%)
Query: 505 RIIGEGGFGVVYRGILDD------GREVAVKVLKRANQHGGR-EFLAELEMLSRLHHRNL 557
R +G+G FG+VY G D VAVK + + R EFL E ++ ++
Sbjct: 12 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 71
Query: 558 VKLFGVCIEDNNRCLVYELIHNGSLESHLHG--DDKVNGPLDWDARMK----IALGAARG 611
V+L GV + +V EL+ +G L+S+L + N P ++ +A A G
Sbjct: 72 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 131
Query: 612 LAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYL 671
+AYL ++ + +HRD + N ++ HDFT K+ DFG+ R + + ++
Sbjct: 132 MAYL---NAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 188
Query: 672 APEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKT 731
APE G SD++S+GVVL E+ + L++ P Q L+ ++ LK
Sbjct: 189 APESLKDGVFTTSSDMWSFGVVLWEITS------LAEQPYQG---------LSNEQVLKF 233
Query: 732 IIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775
++D + +V + MC Q RP E+V LK
Sbjct: 234 VMDGGYLDQPD-NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 276
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 86.7 bits (215), Expect = 1e-18
Identities = 61/204 (29%), Positives = 100/204 (49%), Gaps = 16/204 (7%)
Query: 506 IIGEGGFGVVYRGI-LDDGREVAVKVLK-RANQHGGREFLAELEMLSRLHH---RNLVKL 560
+IG G +G VYRG + GR VA+K++ + E+ +LS+L N+ K
Sbjct: 8 LIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKY 67
Query: 561 FGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSS 620
+G ++ ++ E GS+ + + GP+ I L Y+H+
Sbjct: 68 YGSYLKGPRLWIIMEYAEGGSVRTLMKA-----GPIAEKYISVIIREVLVALKYIHKVG- 121
Query: 621 PRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGH 680
VIHRD K++NIL+ + K+ DFG+A L++ + ST V GT ++APE G
Sbjct: 122 --VIHRDIKAANILVTNTGNVKLCDFGVA-ALLNQNSSKRSTFV-GTPYWMAPEVITEGK 177
Query: 681 LL-VKSDVYSYGVVLLELLTGRKP 703
K+D++S G+ + E+ TG P
Sbjct: 178 YYDTKADIWSLGITIYEMATGNPP 201
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277 |
| >gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Score = 86.2 bits (214), Expect = 2e-18
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 24/205 (11%)
Query: 507 IGEGGFGVVYR-GILDDGREVAVKVLKRANQHGG--REFLAELEMLSRLHHRNLVKLFGV 563
IGEG G+V++ + G VA+K + GG + L E++ L H +VKL V
Sbjct: 8 IGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDV 67
Query: 564 CIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRV 623
+ LV E + L L +++ + M++ L +G+AY+H + +
Sbjct: 68 FPHGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLL---KGVAYMHAN---GI 120
Query: 624 IHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLV 683
+HRD K +N+L+ D K++DFGLAR E + +H + T Y APE LL
Sbjct: 121 MHRDLKPANLLISADGVLKIADFGLARL-FSEEEPRLYSHQVATRWYRAPE------LLY 173
Query: 684 KS-------DVYSYGVVLLELLTGR 701
+ D+++ G + ELL G
Sbjct: 174 GARKYDPGVDLWAVGCIFAELLNGS 198
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 84.8 bits (210), Expect = 3e-18
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 10/207 (4%)
Query: 500 GFHTSRIIGEGGFGVVYR-GILDDGREVAVKV--LKRANQHGGREFLAELEMLSRLHHRN 556
F + +G+G +G VY+ L D + A+K L +Q + + E+ +L+ ++H N
Sbjct: 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPN 60
Query: 557 LVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLH 616
++ ++ N C+V E G L + K + +I + RGL LH
Sbjct: 61 IISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH 120
Query: 617 EDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYA 676
E +++HRD KS+NILL + K+ D G+++ K+++ +GT Y+APE
Sbjct: 121 EQ---KILHRDLKSANILLVANDLVKIGDLGISKVL----KKNMAKTQIGTPHYMAPEVW 173
Query: 677 MTGHLLVKSDVYSYGVVLLELLTGRKP 703
KSD++S G +L E+ T P
Sbjct: 174 KGRPYSYKSDIWSLGCLLYEMATFAPP 200
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 85.5 bits (212), Expect = 4e-18
Identities = 65/207 (31%), Positives = 96/207 (46%), Gaps = 29/207 (14%)
Query: 506 IIGEGGFGVVYR-GILDDGREVAVKV-LKRANQHGGREF-LAELEMLSRLHHRNLVKLFG 562
++GEG +G+V + + G+ VA+K L+ + ++ + E+ ML +L H NLV L
Sbjct: 8 LVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIE 67
Query: 563 VCIEDNNRCLVYELIHNGSLESHLHGDDKVNGP--LDWDARMKIALGAARGLAYLHEDSS 620
V LV+E + + L DD P LD K RG+ + H S
Sbjct: 68 VFRRKKRLYLVFEFVDHTVL------DDLEKYPNGLDESRVRKYLFQILRGIEFCH---S 118
Query: 621 PRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGH 680
+IHRD K NIL+ K+ DFG ART G + T + T Y APE
Sbjct: 119 HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE--VYTDYVATRWYRAPE------ 170
Query: 681 LLVKS-------DVYSYGVVLLELLTG 700
LLV D+++ G ++ E+LTG
Sbjct: 171 LLVGDTKYGRAVDIWAVGCLVTEMLTG 197
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Score = 85.1 bits (210), Expect = 4e-18
Identities = 70/233 (30%), Positives = 116/233 (49%), Gaps = 38/233 (16%)
Query: 505 RIIGEGGFGVVYRGI-LDDGRE----VAVKVLKR-ANQHGGREFLAELEMLSRLHHRNLV 558
+++G G FG VY+GI + DG VA+KVL+ + +E L E +++ + +
Sbjct: 13 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVC 72
Query: 559 KLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGP---LDWDARMKIALGAARGLAYL 615
+L G+C+ + LV +L+ G L ++ + G L+W ++ A+G++YL
Sbjct: 73 RLLGICLTSTVQ-LVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQI------AKGMSYL 125
Query: 616 HEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTA-LDEGNKHISTHVMGTFGYLAPE 674
E R++HRD + N+L++ K++DFGLAR +DE H + ++A E
Sbjct: 126 EE---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKV-PIKWMALE 181
Query: 675 YAMTGHLLVKSDVYSYGVVLLELLT-GRKPVD----------------LSQPP 710
+ +SDV+SYGV + EL+T G KP D L QPP
Sbjct: 182 SILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPP 234
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279 |
| >gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Score = 84.6 bits (209), Expect = 7e-18
Identities = 63/216 (29%), Positives = 110/216 (50%), Gaps = 20/216 (9%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKV-LKRANQHGGREFLAEL--EMLS--RLHHRNLV 558
+++G G FG V++GI + +G + + V +K GR+ E+ ML+ L H +V
Sbjct: 13 KLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIV 72
Query: 559 KLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGP---LDWDARMKIALGAARGLAYL 615
+L G+C + LV +L GSL H+ P L+W ++ A+G+ YL
Sbjct: 73 RLLGIC-PGASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQI------AKGMYYL 125
Query: 616 HEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEY 675
E R++HR+ + NILL+ D +++DFG+A + K+ + ++A E
Sbjct: 126 EEH---RMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALES 182
Query: 676 AMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPP 710
+ G +SDV+SYGV + E+++ G +P +P
Sbjct: 183 ILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH 218
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279 |
| >gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Score = 84.7 bits (209), Expect = 1e-17
Identities = 70/219 (31%), Positives = 107/219 (48%), Gaps = 39/219 (17%)
Query: 506 IIGEGGFGVVYRGILD-DGREV--AVKVLKR-ANQHGGREFLAELEMLSRL-HHRNLVKL 560
+IGEG FG V R ++ DG ++ A+K+LK A+++ R+F ELE+L +L HH N++ L
Sbjct: 9 VIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINL 68
Query: 561 FGVCIEDNNRCLVY---ELIHNGSLESHL---------------HGDDKVNGPLDWDARM 602
G C NR +Y E G+L L HG L +
Sbjct: 69 LGAC---ENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHG---TASTLTSQQLL 122
Query: 603 KIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIST 662
+ A A G+ YL S + IHRD + N+L+ + K++DFGL+R G +
Sbjct: 123 QFASDVATGMQYL---SEKQFIHRDLAARNVLVGENLASKIADFGLSR-----GEEVYVK 174
Query: 663 HVMGTFG--YLAPEYAMTGHLLVKSDVYSYGVVLLELLT 699
MG ++A E KSDV+S+GV+L E+++
Sbjct: 175 KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVS 213
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 84.6 bits (209), Expect = 1e-17
Identities = 65/220 (29%), Positives = 103/220 (46%), Gaps = 35/220 (15%)
Query: 507 IGEGGFGVVYR----GILDDGRE----VAVKVLK-RANQHGGREFLAELEMLSRL-HHRN 556
+GEG FG V R GI + VAVK+LK A + ++E+E++ + H+N
Sbjct: 20 LGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKN 79
Query: 557 LVKLFGVCIEDNNRCLVYELIHNGSLESHLHG------DDKVN------GPLDWDARMKI 604
++ L GVC ++ ++ E G+L L D + L + +
Sbjct: 80 IINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSC 139
Query: 605 ALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHV 664
A ARG+ YL S R IHRD + N+L+ D K++DFGLAR G I +
Sbjct: 140 AYQVARGMEYL---ESRRCIHRDLAARNVLVTEDNVMKIADFGLAR-----GVHDIDYYK 191
Query: 665 MGTFG-----YLAPEYAMTGHLLVKSDVYSYGVVLLELLT 699
+ G ++APE +SDV+S+G+++ E+ T
Sbjct: 192 KTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFT 231
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Score = 84.2 bits (208), Expect = 1e-17
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 506 IIGEGGFGVVYRGI-LDDGREVAVKVLK-RANQHGGREFLAELEMLSRLHHRNLVKLFGV 563
I+G G G VY+ L R +AVKV+ ++ ++ELE+L + ++ +G
Sbjct: 8 ILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGA 67
Query: 564 CIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRV 623
+N + E + GSL+ + + V G +IA+ +GL YL S ++
Sbjct: 68 FFVENRISICTEFMDGGSLDVYRKIPEHVLG--------RIAVAVVKGLTYLW---SLKI 116
Query: 624 IHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLV 683
+HRD K SN+L+ K+ DFG++ ++ I+ +GT Y+APE +
Sbjct: 117 LHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS----IAKTYVGTNAYMAPERISGEQYGI 172
Query: 684 KSDVYSYGVVLLELLTGRKP 703
SDV+S G+ +EL GR P
Sbjct: 173 HSDVWSLGISFMELALGRFP 192
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279 |
| >gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 83.6 bits (206), Expect = 1e-17
Identities = 66/219 (30%), Positives = 103/219 (47%), Gaps = 39/219 (17%)
Query: 506 IIGEGGFGVVYRGILD-DGREV--AVKVLKR-ANQHGGREFLAELEMLSRL-HHRNLVKL 560
+IGEG FG V + + DG + A+K +K A++ R+F ELE+L +L HH N++ L
Sbjct: 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 61
Query: 561 FGVCIEDNNRCLVY---ELIHNGSLESHL---------------HGDDKVNGPLDWDARM 602
G C +R +Y E +G+L L + L +
Sbjct: 62 LGAC---EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS---TASTLSSQQLL 115
Query: 603 KIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIST 662
A ARG+ YL + + IHRD + NIL+ ++ K++DFGL+R G +
Sbjct: 116 HFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR-----GQEVYVK 167
Query: 663 HVMGTFG--YLAPEYAMTGHLLVKSDVYSYGVVLLELLT 699
MG ++A E SDV+SYGV+L E+++
Sbjct: 168 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 206
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 84.3 bits (209), Expect = 1e-17
Identities = 70/204 (34%), Positives = 101/204 (49%), Gaps = 19/204 (9%)
Query: 506 IIGEGGFGVVYRG-ILDDGREVAVKVLKRANQHGGREF--LAELEMLSRLHHRNLVKLFG 562
IGEG +G+VYR G VA+K ++ N+ G L E+ +L L H N+V+L
Sbjct: 14 RIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKE 73
Query: 563 VCIED--NNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMK-IALGAARGLAYLHEDS 619
V + ++ LV E L S L D + P ++++K + L RGL YLHE+
Sbjct: 74 VVVGKHLDSIFLVMEYCEQ-DLASLL---DNMPTPFS-ESQVKCLMLQLLRGLQYLHENF 128
Query: 620 SPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPE--YAM 677
+IHRD K SN+LL K++DFGLART T + T Y APE
Sbjct: 129 ---IIHRDLKVSNLLLTDKGCLKIADFGLARTY--GLPAKPMTPKVVTLWYRAPELLLGC 183
Query: 678 TGHLLVKSDVYSYGVVLLELLTGR 701
T + D+++ G +L ELL +
Sbjct: 184 TTYTT-AIDMWAVGCILAELLAHK 206
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 82.5 bits (204), Expect = 2e-17
Identities = 60/208 (28%), Positives = 89/208 (42%), Gaps = 18/208 (8%)
Query: 507 IGEGGFGVVYRG-ILDDGREVAVKVLKRANQHGGRE---FLAELE-MLSRLHHRNLVKLF 561
I +G FG VY G A+KVLK+++ + AE M+ + + KL+
Sbjct: 4 ISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLY 63
Query: 562 GVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSP 621
+ LV E ++ G S + K G L D + G+ LH+
Sbjct: 64 YSFQSKDYLYLVMEYLNGGDCASLI----KTLGGLPEDWAKQYIAEVVLGVEDLHQRG-- 117
Query: 622 RVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHL 681
+IHRD K N+L++ K++DFGL+R L + +GT YLAPE +
Sbjct: 118 -IIHRDIKPENLLIDQTGHLKLTDFGLSRNGL------ENKKFVGTPDYLAPETILGVGD 170
Query: 682 LVKSDVYSYGVVLLELLTGRKPVDLSQP 709
SD +S G V+ E L G P P
Sbjct: 171 DKMSDWWSLGCVIFEFLFGYPPFHAETP 198
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 83.1 bits (206), Expect = 2e-17
Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLA--ELEMLSRLHHRNLVKLFGV 563
IGEG +GVVY+ G VA+K ++ + G A E+ +L L+H N+V+L V
Sbjct: 7 IGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDV 66
Query: 564 CIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRV 623
+N LV+E + L+ ++ D LD +G+AY H S RV
Sbjct: 67 VHSENKLYLVFEFLDL-DLKKYM--DSSPLTGLDPPLIKSYLYQLLQGIAYCH---SHRV 120
Query: 624 IHRDFKSSNILLEHDFTPKVSDFGLART---ALDEGNKHISTHVMGTFGYLAPEYAMTG- 679
+HRD K N+L++ + K++DFGLAR + TH + T Y APE +
Sbjct: 121 LHRDLKPQNLLIDREGALKLADFGLARAFGVPV-----RTYTHEVVTLWYRAPEILLGSR 175
Query: 680 HLLVKSDVYSYGVVLLELLTGRKP 703
D++S G + E++ R+P
Sbjct: 176 QYSTPVDIWSIGCIFAEMVN-RRP 198
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 82.4 bits (203), Expect = 2e-17
Identities = 65/195 (33%), Positives = 95/195 (48%), Gaps = 14/195 (7%)
Query: 507 IGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGR-EFLAELEMLSRLHHRNLVKLFGVC 564
IG G FG V+ G L D VAVK + + +FL E +L + H N+V+L GVC
Sbjct: 3 IGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 62
Query: 565 IEDNNRCLVYELIHNGSLESHLHGDDKVNGP-LDWDARMKIALGAARGLAYLHEDSSPRV 623
+ +V EL+ G + L + GP L +++ AA G+ YL S
Sbjct: 63 TQKQPIYIVMELVQGGDFLTFLRTE----GPRLKVKELIQMVENAAAGMEYLE---SKHC 115
Query: 624 IHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTF--GYLAPEYAMTGHL 681
IHRD + N L+ K+SDFG++R +E + ST M + APE G
Sbjct: 116 IHRDLAARNCLVTEKNVLKISDFGMSRE--EEDGVYASTGGMKQIPVKWTAPEALNYGRY 173
Query: 682 LVKSDVYSYGVVLLE 696
+SDV+S+G++L E
Sbjct: 174 SSESDVWSFGILLWE 188
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 82.3 bits (204), Expect = 3e-17
Identities = 65/208 (31%), Positives = 92/208 (44%), Gaps = 19/208 (9%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCI 565
IG G +G VY+ + G VA+KV+K E+ ML H N+V FG +
Sbjct: 11 IGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYL 70
Query: 566 EDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIH 625
+ +V E GSL+ GPL + +GLAYLHE IH
Sbjct: 71 RRDKLWIVMEYCGGGSLQDIYQ---VTRGPLSELQIAYVCRETLKGLAYLHET---GKIH 124
Query: 626 RDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYA---MTGHLL 682
RD K +NILL D K++DFG++ L + + GT ++APE A G
Sbjct: 125 RDIKGANILLTEDGDVKLADFGVS-AQLTATIAKRKSFI-GTPYWMAPEVAAVERKGGYD 182
Query: 683 VKSDVYSYGVVLLELLTGRKPVDLSQPP 710
K D+++ G+ +EL QPP
Sbjct: 183 GKCDIWALGITAIELAEL-------QPP 203
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262 |
| >gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Score = 82.2 bits (203), Expect = 3e-17
Identities = 56/214 (26%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 505 RIIGEGGFGVVY--RGILDDGREVAVKVLKRANQHGGRE-----FLAELEMLSRLHHRNL 557
R++G G FG+V+ R D + V ++K+ + E ++L L H N+
Sbjct: 6 RVVGRGAFGIVHLCRR-KADQKLV---IIKQIPVEQMTKDERLAAQNECQVLKLLSHPNI 61
Query: 558 VKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHE 617
++ + +ED +V E G+L ++ + N LD D + + L ++H
Sbjct: 62 IEYYENFLEDKALMIVMEYAPGGTLAEYIQ--KRCNSLLDEDTILHFFVQILLALHHVH- 118
Query: 618 DSSPRVIHRDFKSSNILLE-HDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYA 676
+ ++HRD K+ NILL+ H K+ DFG+++ +K + V+GT Y++PE
Sbjct: 119 --TKLILHRDLKTQNILLDKHKMVVKIGDFGISKIL---SSKSKAYTVVGTPCYISPELC 173
Query: 677 MTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPP 710
KSD+++ G VL EL + ++ + + P
Sbjct: 174 EGKPYNQKSDIWALGCVLYELASLKRAFEAANLP 207
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256 |
| >gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Score = 82.0 bits (202), Expect = 5e-17
Identities = 67/217 (30%), Positives = 102/217 (47%), Gaps = 23/217 (10%)
Query: 507 IGEGGFGVVYRGIL------DDGREVAVKVLKRANQHGGRE-FLAELEMLSRLHHRNLVK 559
+GE FG VY+G L + + VA+K LK + RE F E M SRL H N+V
Sbjct: 13 LGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVC 72
Query: 560 LFGVCIEDNNRCLVYELIHNGSLESHL-----HGD------DK-VNGPLDWDARMKIALG 607
L GV ++ +++ + L L H D DK V L+ + I
Sbjct: 73 LLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQ 132
Query: 608 AARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGT 667
A G+ +L SS V+H+D + N+L+ K+SD GL R + + +
Sbjct: 133 IAAGMEFL---SSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLP 189
Query: 668 FGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
+++PE M G + SD++SYGVVL E+ + G +P
Sbjct: 190 IRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 226
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 81.4 bits (201), Expect = 6e-17
Identities = 61/213 (28%), Positives = 104/213 (48%), Gaps = 19/213 (8%)
Query: 506 IIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVC 564
++G+G +G+VY L +A+K + + + E+ + S L HRN+V+ G
Sbjct: 15 VLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSD 74
Query: 565 IEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAA--RGLAYLHEDSSPR 622
E+ + E + GSL + L GPL + + I GL YLH++ +
Sbjct: 75 SENGFFKIFMEQVPGGSLSALLRSK---WGPLKDNEQTIIFYTKQILEGLKYLHDN---Q 128
Query: 623 VIHRDFKSSNILLE-HDFTPKVSDFGLA-RTALDEGNKHISTHVMGTFGYLAPE---YAM 677
++HRD K N+L+ + K+SDFG + R A G + GT Y+APE
Sbjct: 129 IVHRDIKGDNVLVNTYSGVVKISDFGTSKRLA---GINPCTETFTGTLQYMAPEVIDKGP 185
Query: 678 TGHLLVKSDVYSYGVVLLELLTGRKP-VDLSQP 709
G+ +D++S G ++E+ TG+ P ++L +P
Sbjct: 186 RGY-GAPADIWSLGCTIVEMATGKPPFIELGEP 217
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 81.9 bits (203), Expect = 7e-17
Identities = 71/221 (32%), Positives = 102/221 (46%), Gaps = 35/221 (15%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGG------REFLAELEMLSRLH 553
+ IGEG +G VY+ L+ GR VA+K ++ G RE +A L+ L
Sbjct: 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLRE-IALLKQLESFE 59
Query: 554 HRNLVKLFGVC-IEDNNRC----LVYELIHNGSLESHLHGDDKVNGP-LDWDARMKIALG 607
H N+V+L VC +R LV+E + L ++L K P L + +
Sbjct: 60 HPNIVRLLDVCHGPRTDRELKLTLVFEHVDQ-DLATYL---SKCPKPGLPPETIKDLMRQ 115
Query: 608 AARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLART-----ALDEGNKHIST 662
RG+ +LH S R++HRD K NIL+ D K++DFGLAR AL T
Sbjct: 116 LLRGVDFLH---SHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMAL--------T 164
Query: 663 HVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
V+ T Y APE + D++S G + EL R+P
Sbjct: 165 SVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFR-RRP 204
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Score = 82.2 bits (203), Expect = 8e-17
Identities = 77/228 (33%), Positives = 108/228 (47%), Gaps = 30/228 (13%)
Query: 486 AKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGRE-VAVKVLK---RANQHGGRE 541
A+ F+ +D EK F R IG G FG VY E VA+K + + + ++
Sbjct: 5 AELFSKDDPEKL---FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQD 61
Query: 542 FLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL-IHNGS--LESHLHGDDKVNGPLDW 598
+ E+ L +L H N ++ G + ++ LV E + + S LE H PL
Sbjct: 62 IIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCLGSASDILEVH-------KKPLQE 114
Query: 599 DARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNK 658
I GA +GLAYLH S IHRD K+ NILL T K++DFG A + + N
Sbjct: 115 VEIAAICHGALQGLAYLH---SHERIHRDIKAGNILLTEPGTVKLADFGSA-SLVSPANS 170
Query: 659 HISTHVMGTFGYLAPE--YAM-TGHLLVKSDVYSYGVVLLELLTGRKP 703
+ GT ++APE AM G K DV+S G+ +E L RKP
Sbjct: 171 FV-----GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE-LAERKP 212
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307 |
| >gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 81.9 bits (203), Expect = 9e-17
Identities = 57/222 (25%), Positives = 91/222 (40%), Gaps = 47/222 (21%)
Query: 507 IGEGGFGVVYRGIL---DDGREVAVKVLKRANQHG-GREFLA--ELEMLSRLHHRNLVKL 560
IG G +G VY+ DG+E A+K K + G A E+ +L L H N+V L
Sbjct: 8 IGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSL 67
Query: 561 FGVCIEDNNRCL----------VYELIHNGSLESHLHGDDKVNGPLDWDARM--KIALGA 608
V +E ++ + ++++I + M +
Sbjct: 68 VEVFLEHADKSVYLLFDYAEHDLWQIIK--------FHRQAKRVSIP--PSMVKSLLWQI 117
Query: 609 ARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTP----KVSDFGLAR------TALDEGNK 658
G+ YLH + V+HRD K +NIL+ + K+ D GLAR L + +
Sbjct: 118 LNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDP 174
Query: 659 HISTHVMGTFGYLAPEYAMTGHLLVKS-DVYSYGVVLLELLT 699
V+ T Y APE + K+ D+++ G + ELLT
Sbjct: 175 -----VVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 211
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316 |
| >gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Score = 80.9 bits (200), Expect = 1e-16
Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 13/202 (6%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGG--REFLAELEMLSRLHHRNLVKLFGV 563
IGEG +G V++ + VA+K ++ + G L E+ +L L H+N+V+L+ V
Sbjct: 8 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDV 67
Query: 564 CIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRV 623
D LV+E + L+ + D NG +D + +GLA+ H S V
Sbjct: 68 LHSDKKLTLVFEYC-DQDLKKYF---DSCNGDIDPEIVKSFMFQLLKGLAFCH---SHNV 120
Query: 624 IHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLV 683
+HRD K N+L+ + K++DFGLAR A + S V+ T Y P+ L
Sbjct: 121 LHRDLKPQNLLINKNGELKLADFGLAR-AFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYS 178
Query: 684 KS-DVYSYGVVLLELLTGRKPV 704
S D++S G + EL +P+
Sbjct: 179 TSIDMWSAGCIFAELANAGRPL 200
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284 |
| >gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Score = 80.4 bits (198), Expect = 1e-16
Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 15/204 (7%)
Query: 507 IGEGGFGVVYRGILD---DGREVAVKVLKRANQHGG--REFLAELEMLSRLHHRNLVKLF 561
+G G FG V +G+ + VAVK+LK N E L E ++ +L + +V++
Sbjct: 3 LGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMI 62
Query: 562 GVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSP 621
G+C E + LV EL G L L + V + ++++G + YL E +
Sbjct: 63 GIC-EAESWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMG----MKYLEETN-- 115
Query: 622 RVIHRDFKSSNILLEHDFTPKVSDFGLART-ALDEGNKHISTHVMGTFGYLAPEYAMTGH 680
+HRD + N+LL K+SDFGL++ DE TH + APE
Sbjct: 116 -FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYK 174
Query: 681 LLVKSDVYSYGVVLLELLT-GRKP 703
KSDV+S+GV++ E + G+KP
Sbjct: 175 FSSKSDVWSFGVLMWEAFSYGQKP 198
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 81.0 bits (200), Expect = 1e-16
Identities = 63/210 (30%), Positives = 105/210 (50%), Gaps = 18/210 (8%)
Query: 507 IGEGGFGVVYRGILDD---GREVAVKVLKRANQHGGREFL-AELEMLSRLHHRNLVKLFG 562
IGEG G+V I D GR+VAVK + Q RE L E+ ++ H N+V+++
Sbjct: 27 IGEGSTGIVC--IATDKSTGRQVAVKKMDLRKQQR-RELLFNEVVIMRDYQHPNIVEMYS 83
Query: 563 VCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPR 622
+ + +V E + G+L D + ++ + + L + L++LH +
Sbjct: 84 SYLVGDELWVVMEFLEGGALT-----DIVTHTRMNEEQIATVCLAVLKALSFLH---AQG 135
Query: 623 VIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLL 682
VIHRD KS +ILL D K+SDFG E + S ++GT ++APE
Sbjct: 136 VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKS--LVGTPYWMAPEVISRLPYG 193
Query: 683 VKSDVYSYGVVLLELLTGRKPVDLSQPPGQ 712
+ D++S G++++E++ G P ++PP Q
Sbjct: 194 TEVDIWSLGIMVIEMVDGEPPY-FNEPPLQ 222
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Score = 82.1 bits (203), Expect = 1e-16
Identities = 71/227 (31%), Positives = 105/227 (46%), Gaps = 22/227 (9%)
Query: 501 FHTSRIIGEGGFGVVYRGILD--DGREVAVKVLKRANQH--GGREFLAELEMLSRLHHRN 556
R IG G FGVV+ + D DG+ VA+K + Q+ + EL+ML H N
Sbjct: 2 VEPDRPIGYGAFGVVW-SVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDN 60
Query: 557 LVKLFGVCIEDNNRC-----LVYELIHNGSLESHLHGDDKVNGPLDWDARMKIAL-GAAR 610
++ + + +V EL+ S LH PL D +K+ L R
Sbjct: 61 VLSALDILQPPHIDPFEEIYVVTELMQ-----SDLHKIIVSPQPLSSD-HVKVFLYQILR 114
Query: 611 GLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGY 670
GL YLH S ++HRD K N+L+ + K+ DFGLAR + +KH++ V+ + Y
Sbjct: 115 GLKYLH---SAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQY-Y 170
Query: 671 LAPEYAM-TGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLV 716
APE M + H D++S G + ELL R P Q +L+
Sbjct: 171 RAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLI 217
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372 |
| >gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 81.6 bits (202), Expect = 2e-16
Identities = 62/215 (28%), Positives = 96/215 (44%), Gaps = 28/215 (13%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREF----LAELEMLSRLHHR 555
+ IGEG +G+V G +VA+K + F L E+++L R H
Sbjct: 7 YQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQ---TFCQRTLREIKILRRFKHE 63
Query: 556 NLVKLFGVCIED-----NNRCLVYELIHNGSLESHLHGDDKV--NGPLDWDARMKIALGA 608
N++ + + N+ +V EL +E+ L+ K+ L D
Sbjct: 64 NIIGILDIIRPPSFESFNDVYIVQEL-----METDLY---KLIKTQHLSNDHIQYFLYQI 115
Query: 609 ARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR-TALDEGNKHISTHVMGT 667
RGL Y+H S V+HRD K SN+LL + K+ DFGLAR + + T + T
Sbjct: 116 LRGLKYIH---SANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVAT 172
Query: 668 FGYLAPEYAMTGHLLVKS-DVYSYGVVLLELLTGR 701
Y APE + K+ D++S G +L E+L+ R
Sbjct: 173 RWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNR 207
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336 |
| >gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Score = 81.2 bits (200), Expect = 2e-16
Identities = 60/215 (27%), Positives = 113/215 (52%), Gaps = 20/215 (9%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGRE----VAVKVLKRANQ-HGGREFLAELEMLSRLHH 554
F +++G G FG VY+G+ + +G + VA+K L+ A +E L E +++ + +
Sbjct: 9 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 68
Query: 555 RNLVKLFGVCIEDNNRCLVYELIHNGSLESHL-HGDDKVNGP--LDWDARMKIALGAARG 611
++ +L G+C+ + L+ +L+ G L ++ D + L+W ++ A+G
Sbjct: 69 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 121
Query: 612 LAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYL 671
+ YL E R++HRD + N+L++ K++DFGLA+ + ++ + ++
Sbjct: 122 MNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWM 178
Query: 672 APEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVD 705
A E + +SDV+SYGV + EL+T G KP D
Sbjct: 179 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 213
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 80.7 bits (199), Expect = 2e-16
Identities = 61/201 (30%), Positives = 96/201 (47%), Gaps = 9/201 (4%)
Query: 507 IGEGGFGVVYRGILD-DGREVAVKVL--KRANQHGGRE-FLAELEMLSRLHHRNLVKLFG 562
+G+GGFG V + G+ A K L KR + G E + E +L+++H R +V L
Sbjct: 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAY 60
Query: 563 VCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPR 622
+ CLV +++ G L H++ D+ N GL +LH+ R
Sbjct: 61 AFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---R 117
Query: 623 VIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLL 682
+I+RD K N+LL++D ++SD GLA D +K + GT G++APE
Sbjct: 118 IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSK--TKGYAGTPGFMAPELLQGEEYD 175
Query: 683 VKSDVYSYGVVLLELLTGRKP 703
D ++ GV L E++ R P
Sbjct: 176 FSVDYFALGVTLYEMIAARGP 196
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Score = 80.0 bits (197), Expect = 2e-16
Identities = 61/204 (29%), Positives = 101/204 (49%), Gaps = 15/204 (7%)
Query: 507 IGEGGFGVVYRGILDDGR---EVAVKVLKRANQHGGR-EFLAELEMLSRLHHRNLVKLFG 562
+G G FG V +G+ + +VA+KVLK N+ R E + E E++ +L + +V++ G
Sbjct: 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIG 62
Query: 563 VCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPR 622
VC E LV E+ G L L G + +++ + G+ YL +
Sbjct: 63 VC-EAEALMLVMEMASGGPLNKFLSGKKD---EITVSNVVELMHQVSMGMKYLEGKN--- 115
Query: 623 VIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTF--GYLAPEYAMTGH 680
+HRD + N+LL + K+SDFGL++ AL + + G + + APE
Sbjct: 116 FVHRDLAARNVLLVNQHYAKISDFGLSK-ALGADDSYYKARSAGKWPLKWYAPECINFRK 174
Query: 681 LLVKSDVYSYGVVLLELLT-GRKP 703
+SDV+SYG+ + E + G+KP
Sbjct: 175 FSSRSDVWSYGITMWEAFSYGQKP 198
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257 |
| >gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Score = 80.1 bits (198), Expect = 2e-16
Identities = 64/216 (29%), Positives = 104/216 (48%), Gaps = 37/216 (17%)
Query: 507 IGEGGFGVVYRGILDD-GREVAVKVLKRANQHGGRE---FLAELEMLSRLHH-RNLVKLF 561
IG G FG V + + G +AVK ++ +E L +L+++ R +VK +
Sbjct: 12 IGRGAFGTVNKMLHKPSGTIMAVKRIRSTV--DEKEQKRLLMDLDVVMRSSDCPYIVKFY 69
Query: 562 G---------VCIE--DNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAAR 610
G +C+E D + Y+ ++ L+S + +++ G KIA+ +
Sbjct: 70 GALFREGDCWICMELMDISLDKFYKYVYE-VLKSVI--PEEILG--------KIAVATVK 118
Query: 611 GLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGY 670
L YL E+ ++IHRD K SNILL+ + K+ DFG++ +D K T G Y
Sbjct: 119 ALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAK---TRDAGCRPY 173
Query: 671 LAPEYAMTGHLL---VKSDVYSYGVVLLELLTGRKP 703
+APE V+SDV+S G+ L E+ TG+ P
Sbjct: 174 MAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFP 209
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 80.1 bits (197), Expect = 4e-16
Identities = 68/220 (30%), Positives = 106/220 (48%), Gaps = 35/220 (15%)
Query: 507 IGEGGFGVVYRGI---LDDGR-----EVAVKVLKR-ANQHGGREFLAELEMLSRL-HHRN 556
+GEG FG V LD + +VAVK+LK A + + ++E+EM+ + H+N
Sbjct: 26 LGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 85
Query: 557 LVKLFGVCIEDNNRCLVYELIHNGSLESHLH-----GDDKVNGP-------LDWDARMKI 604
++ L G C +D ++ E G+L +L G + P L + +
Sbjct: 86 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSC 145
Query: 605 ALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHV 664
A ARG+ YL +S + IHRD + N+L+ D K++DFGLAR HI +
Sbjct: 146 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-----HHIDYYK 197
Query: 665 MGTFG-----YLAPEYAMTGHLLVKSDVYSYGVVLLELLT 699
T G ++APE +SDV+S+GV+L E+ T
Sbjct: 198 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 237
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Score = 79.8 bits (197), Expect = 4e-16
Identities = 73/228 (32%), Positives = 111/228 (48%), Gaps = 31/228 (13%)
Query: 495 EKATNGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLA--ELEMLSR 551
++ + F IGEG +G VY+ D G VA+K ++ N+ G A E+++L +
Sbjct: 3 KRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQ 62
Query: 552 LHHRNLVKLFGVCIEDNNRC----------LVYELI-HN--GSLESHL-HGDDKVNGPLD 597
L+HRN+V L + + + LV+E + H+ G LES L H +
Sbjct: 63 LNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSF- 121
Query: 598 WDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN 657
MK L GL Y H+ + +HRD K SNILL + K++DFGLAR E +
Sbjct: 122 ----MKQLL---EGLNYCHKKN---FLHRDIKCSNILLNNKGQIKLADFGLARLYNSEES 171
Query: 658 KHISTHVMGTFGYLAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPV 704
+ + V+ T Y PE + + DV+S G +L EL T +KP+
Sbjct: 172 RPYTNKVI-TLWYRPPELLLGEERYGPAIDVWSCGCILGELFT-KKPI 217
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302 |
| >gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Score = 79.3 bits (195), Expect = 5e-16
Identities = 73/285 (25%), Positives = 135/285 (47%), Gaps = 34/285 (11%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCI 565
+G+G FG VY+ + G A KV++ ++ +++ E+E+L+ +H +VKL G
Sbjct: 20 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFY 79
Query: 566 EDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIH 625
D ++ E G++++ + D+ G + ++ I L YLH S ++IH
Sbjct: 80 WDGKLWIMIEFCPGGAVDAIMLELDR--GLTEPQIQV-ICRQMLEALQYLH---SMKIIH 133
Query: 626 RDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLL--- 682
RD K+ N+LL D K++DFG++ + + S +GT ++APE M +
Sbjct: 134 RDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDS--FIGTPYWMAPEVVMCETMKDTP 191
Query: 683 --VKSDVYSYGVVLLELLTGRKP------------VDLSQPPGQENLVAWARPLLTTKEG 728
K+D++S G+ L+E+ P + S+PP W+ + ++
Sbjct: 192 YDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWS---MEFRDF 248
Query: 729 LKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773
LKT +D E+ S L++ ++S+ S+RP V +A
Sbjct: 249 LKTALDKHPETRPSAAQLLEHPFVSSV-----TSNRPLRELVAEA 288
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 79.3 bits (196), Expect = 6e-16
Identities = 72/265 (27%), Positives = 111/265 (41%), Gaps = 79/265 (29%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGRE-F----LAELEMLSRLHHRNLVKL 560
+GEG FG VY+ + GR VA LK+ H ++ F L E+++L +L H N+V L
Sbjct: 16 LGEGTFGEVYKARQIKTGRVVA---LKKILMHNEKDGFPITALREIKILKKLKHPNVVPL 72
Query: 561 FGVCIE-----DNNRCLVYE-----------LIHNGSL---ESHLHGDDKVNGPLDWDAR 601
+ +E R VY L+ N S+ ES +
Sbjct: 73 IDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKC------------Y 120
Query: 602 MKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE------ 655
M L G+ YLHE+ ++HRD K++NIL+++ K++DFGLAR
Sbjct: 121 MLQLL---EGINYLHEN---HILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKG 174
Query: 656 ---GNKHISTHVMGTFGYLAPEYAM-----TGHLLVKSDVYSYGVVLLELLTGRKPV--- 704
G T+++ T Y PE + T + D++ G V E+ T R+P+
Sbjct: 175 GGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAV----DIWGIGCVFAEMFT-RRPILQG 229
Query: 705 --DLSQ---------PPGQENLVAW 718
D+ Q P +E W
Sbjct: 230 KSDIDQLHLIFKLCGTPTEETWPGW 254
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 78.7 bits (195), Expect = 6e-16
Identities = 67/228 (29%), Positives = 102/228 (44%), Gaps = 46/228 (20%)
Query: 501 FHTSRIIGEGGFGVVYRG-ILDDGREVAVKVLKRAN-------QHGGREFLAELEMLSRL 552
F + +G G FG V G+ A+K+L +A +H L E +L +
Sbjct: 3 FEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEH----VLNEKRILQSI 58
Query: 553 HHRNLVKLFGVCIEDNNRC-LVYELIHNGSLESHLHGDDKVNG--PLDWDARM---KIAL 606
H LV L+G +D++ LV E + G L SHL + +G P AR ++ L
Sbjct: 59 RHPFLVNLYG-SFQDDSNLYLVMEYVPGGELFSHL----RKSGRFPEPV-ARFYAAQVVL 112
Query: 607 GAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVM- 665
L YLH +++RD K N+LL+ D K++DFG A K +
Sbjct: 113 A----LEYLHSLD---IVYRDLKPENLLLDSDGYIKITDFGFA--------KRVKGRTYT 157
Query: 666 --GTFGYLAPEYAM-TGHLLVKS-DVYSYGVVLLELLTGRKPVDLSQP 709
GT YLAPE + G+ K+ D ++ G+++ E+L G P P
Sbjct: 158 LCGTPEYLAPEIILSKGY--GKAVDWWALGILIYEMLAGYPPFFDDNP 203
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290 |
| >gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Score = 79.7 bits (196), Expect = 6e-16
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 14/196 (7%)
Query: 541 EFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDA 600
+ + EL++L + +V +G D + E + GSL+ L ++ +
Sbjct: 49 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEI---- 104
Query: 601 RMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHI 660
K+++ RGLAYL E +++HRD K SNIL+ K+ DFG++ +D +
Sbjct: 105 LGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----M 158
Query: 661 STHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVA-WA 719
+ +GT Y++PE H V+SD++S G+ L+EL GR P+ PP + L A +
Sbjct: 159 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPI---PPPDAKELEAIFG 215
Query: 720 RPLLTTKEGLKTIIDP 735
RP++ +EG I P
Sbjct: 216 RPVVDGEEGEPHSISP 231
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 78.5 bits (193), Expect = 7e-16
Identities = 66/225 (29%), Positives = 103/225 (45%), Gaps = 24/225 (10%)
Query: 505 RIIGEGGFGVVYRGIL---DDGREVAVKVLKRA--NQHGGREFLAELEMLSRLHHRNLVK 559
+ +GEG FG V G L D +VAVK +K A + +FL+E + H N+++
Sbjct: 5 KTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMR 64
Query: 560 LFGVCIEDNNR------CLVYELIHNGSLESHLHGDDKVNGPLDWDARM--KIALGAARG 611
L GVC++ ++ + +G L S L + P +M K A G
Sbjct: 65 LIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASG 124
Query: 612 LAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGT-FGY 670
+ YL SS IHRD + N +L + V+DFGL++ + G+ + + +
Sbjct: 125 MEYL---SSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYN-GDYYRQGRIAKMPVKW 180
Query: 671 LAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQEN 714
+A E KSDV+S+GV + E+ T G+ P PG EN
Sbjct: 181 IAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPY-----PGVEN 220
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Score = 78.6 bits (194), Expect = 8e-16
Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 18/205 (8%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLA--ELEMLSRLHHRNLVKLFGV 563
IGEG +GVVY+G G+ VA+K ++ ++ G A E+ +L L H N+V L V
Sbjct: 8 IGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDV 67
Query: 564 CIEDNNRCLVYELIHNGSLESHLHGDD-KVNGPLDWDARMKIAL-GAARGLAYLHEDSSP 621
++++ L++E + S++ + D +D +K L +G+ + H S
Sbjct: 68 LMQESRLYLIFEFL---SMDLKKYLDSLPKGQYMD-AELVKSYLYQILQGILFCH---SR 120
Query: 622 RVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNK-HISTHVMGTFGYLAPEYAMTGH 680
RV+HRD K N+L+++ K++DFGLAR G + TH + T Y APE +
Sbjct: 121 RVLHRDLKPQNLLIDNKGVIKLADFGLARAF---GIPVRVYTHEVVTLWYRAPEVLLGSP 177
Query: 681 LL-VKSDVYSYGVVLLELLTGRKPV 704
D++S G + E+ T +KP+
Sbjct: 178 RYSTPVDIWSIGTIFAEMAT-KKPL 201
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 78.2 bits (192), Expect = 9e-16
Identities = 74/268 (27%), Positives = 117/268 (43%), Gaps = 29/268 (10%)
Query: 507 IGEGGFGVVYRGILDDGREV-AVKVLKRANQHGGREFLA-ELEMLSRLHHRNLVKLFGVC 564
IG+G FG V++GI + ++V A+K++ E + E+ +LS+ + K +G
Sbjct: 12 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 71
Query: 565 IEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVI 624
++D ++ E + GS L GPLD I +GL YLH S + I
Sbjct: 72 LKDTKLWIIMEYLGGGSALDLLE-----PGPLDETQIATILREILKGLDYLH---SEKKI 123
Query: 625 HRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVK 684
HRD K++N+LL K++DFG+A D K +GT ++APE K
Sbjct: 124 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR--NTFVGTPFWMAPEVIKQSAYDSK 181
Query: 685 SDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESNISYD 744
+D++S G+ +EL G P P L+ P P +E N S
Sbjct: 182 ADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNP-------------PTLEGNYSK- 227
Query: 745 TLVKVAAIASMCVQPEVSHRPFMGEVVQ 772
+ C+ E S RP E+++
Sbjct: 228 ---PLKEFVEACLNKEPSFRPTAKELLK 252
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Score = 78.2 bits (193), Expect = 1e-15
Identities = 66/208 (31%), Positives = 89/208 (42%), Gaps = 33/208 (15%)
Query: 507 IGEGGFGVVY--RGILDDGREVAVK--VLKRANQHGGREFLAELEMLSRLHHRNLVKLFG 562
IGEG +GVV+ R + G+ VA+K V + + L E+ ML +L H NLV L
Sbjct: 9 IGEGSYGVVFKCRNR-ETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIE 67
Query: 563 VCIEDNNRCLVYELIHN---GSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDS 619
V LV+E + LE + G + KI + + + H
Sbjct: 68 VFRRKRKLHLVFEYCDHTVLNELEKNPRG-------VPEHLIKKIIWQTLQAVNFCH--- 117
Query: 620 SPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTG 679
IHRD K NIL+ K+ DFG AR G+ + T + T Y APE
Sbjct: 118 KHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDY--TDYVATRWYRAPE----- 170
Query: 680 HLLVKS-------DVYSYGVVLLELLTG 700
LLV DV++ G V ELLTG
Sbjct: 171 -LLVGDTQYGPPVDVWAIGCVFAELLTG 197
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286 |
| >gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 78.9 bits (194), Expect = 1e-15
Identities = 68/204 (33%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRANQ---HGGREFLAELEMLSRLHHRNLVKLFG 562
+G G +G V G VAVK L R Q H R + EL +L + H N++ L
Sbjct: 25 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 83
Query: 563 VCIEDNNRCLVYELIHNGSLESHLHGDDKVN----GPLDWDARMKIALGAARGLAYLHED 618
V + E ++ L +HL G D N L D + RGL Y+H
Sbjct: 84 VFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 137
Query: 619 SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMT 678
S +IHRD K SN+ + D K+ DFGLAR DE +++T Y APE +
Sbjct: 138 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLN 191
Query: 679 G-HLLVKSDVYSYGVVLLELLTGR 701
H D++S G ++ ELLTGR
Sbjct: 192 WMHYNQTVDIWSVGCIMAELLTGR 215
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 77.3 bits (190), Expect = 1e-15
Identities = 65/211 (30%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 505 RIIGEGGFGVVYRGILD--DGRE--VAVKVLKR-ANQHGGREFLAELEMLSRLHHRNLVK 559
RI+G G FG + RG L RE VA+ L+ + R FLAE L + H N+V+
Sbjct: 11 RILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVR 70
Query: 560 LFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDS 619
L GV N +V E + NG+L+S L K G L M + G A G+ YL E
Sbjct: 71 LEGVITRGNTMMIVTEYMSNGALDSFLR---KHEGQLVAGQLMGMLPGLASGMKYLSEMG 127
Query: 620 SPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFG------YLAP 673
+H+ + +L+ D K+S F + S + T + AP
Sbjct: 128 ---YVHKGLAAHKVLVNSDLVCKISGFR-------RLQEDKSEAIYTTMSGKSPVLWAAP 177
Query: 674 EYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
E H SDV+S+G+V+ E+++ G +P
Sbjct: 178 EAIQYHHFSSASDVWSFGIVMWEVMSYGERP 208
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 78.7 bits (194), Expect = 1e-15
Identities = 66/209 (31%), Positives = 99/209 (47%), Gaps = 23/209 (11%)
Query: 506 IIGEGGFGVVYRGI-LDDGREVAVKVLKRANQH--GGREFLAELEMLSRLHHRNLVKLFG 562
+IG+G +GVV I G +VA+K + +H L E+++L L H ++V++
Sbjct: 7 VIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKH 66
Query: 563 VCIEDNNR-----CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHE 617
+ + + R +V+EL +ES LH K N L + R L Y+H
Sbjct: 67 IMLPPSRREFKDIYVVFEL-----MESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIH- 120
Query: 618 DSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIS-THVMGTFGYLAPEYA 676
+ V HRD K NIL D K+ DFGLAR A ++ I T + T Y APE
Sbjct: 121 --TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-- 176
Query: 677 MTGHLLVKS----DVYSYGVVLLELLTGR 701
+ G K D++S G + E+LTG+
Sbjct: 177 LCGSFFSKYTPAIDIWSIGCIFAEVLTGK 205
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338 |
| >gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 77.6 bits (192), Expect = 2e-15
Identities = 63/219 (28%), Positives = 95/219 (43%), Gaps = 53/219 (24%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREF--------LAELEMLSRL-HHRN 556
+G+G FG VY + G VA+K +K+ +F L E++ L +L H N
Sbjct: 7 LGDGTFGSVYLARNKETGELVAIKKMKK-------KFYSWEECMNLREVKSLRKLNEHPN 59
Query: 557 LVKLFGVCIEDNNRCLVYELIHNGSLESHLHG--DDKVNGPLDWDARMKIALGAARGLAY 614
+VKL V E++ V+E +E +L+ D+ P I +GLA+
Sbjct: 60 IVKLKEVFRENDELYFVFEY-----MEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAH 114
Query: 615 LHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIS-----THVMGTFG 669
+H+ HRD K N+L+ K++DFGLAR I T + T
Sbjct: 115 IHKHG---FFHRDLKPENLLVSGPEVVKIADFGLAR--------EIRSRPPYTDYVSTRW 163
Query: 670 YLAPEYAMTGHLLVKSDVYS-------YGVVLLELLTGR 701
Y APE +L++S YS G ++ EL T R
Sbjct: 164 YRAPE------ILLRSTSYSSPVDIWALGCIMAELYTLR 196
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 77.4 bits (190), Expect = 2e-15
Identities = 61/199 (30%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 507 IGEGGFGVVYRGILDDGREV-AVKVLKRANQHGGREFLA-ELEMLSRLHHRNLVKLFGVC 564
IG+G FG VY+GI + +EV A+K++ E + E+ +LS+ + + +G
Sbjct: 12 IGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSY 71
Query: 565 IEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVI 624
++ ++ E + GS L GPL+ I +GL YLH S R I
Sbjct: 72 LKGTKLWIIMEYLGGGSALDLLK-----PGPLEETYIATILREILKGLDYLH---SERKI 123
Query: 625 HRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVK 684
HRD K++N+LL K++DFG+A D K +GT ++APE K
Sbjct: 124 HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR--NTFVGTPFWMAPEVIKQSAYDFK 181
Query: 685 SDVYSYGVVLLELLTGRKP 703
+D++S G+ +EL G P
Sbjct: 182 ADIWSLGITAIELAKGEPP 200
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 78.5 bits (194), Expect = 2e-15
Identities = 66/211 (31%), Positives = 95/211 (45%), Gaps = 32/211 (15%)
Query: 505 RIIGEGGFGVVYRGILDD-GREVAVKVLKRANQ---HGGREFLAELEMLSRLHHRNLVKL 560
+G G +G V GR+VA+K L R Q H R + EL +L + H N++ L
Sbjct: 21 SPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTY-RELRLLKHMDHENVIGL 79
Query: 561 FGVCIEDNNR------CLVYELIH---NGSLESHLHGDDKVNGPLDWDARMKIALGAARG 611
V ++ LV L+ N ++ DD + + RG
Sbjct: 80 LDVFTPASSLEDFQDVYLVTHLMGADLNNIVKCQKLSDDHIQ---------FLVYQILRG 130
Query: 612 LAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYL 671
L Y+H S +IHRD K SNI + D K+ DFGLAR DE ++ +V T Y
Sbjct: 131 LKYIH---SAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE----MTGYV-ATRWYR 182
Query: 672 APEYAMT-GHLLVKSDVYSYGVVLLELLTGR 701
APE + H D++S G ++ ELLTG+
Sbjct: 183 APEIMLNWMHYNQTVDIWSVGCIMAELLTGK 213
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343 |
| >gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Score = 77.1 bits (190), Expect = 2e-15
Identities = 62/219 (28%), Positives = 102/219 (46%), Gaps = 30/219 (13%)
Query: 500 GFHTSRIIGEGGFGVVYRGILDDG-----REVAVKVLK-RANQHGGREFLAELEMLSRLH 553
S ++ EG FG ++ GIL D EV VK +K A++ L E +L L
Sbjct: 7 RVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLS 66
Query: 554 HRNLVKLFGVCIEDNNRCLV-YELIHNGSLESHL----HGDDKVNGPLDWDARMKIALGA 608
H+N++ + VCIED V Y ++ G+L+ L G+ L + +A+
Sbjct: 67 HQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQI 126
Query: 609 ARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTAL--------DEGNKHI 660
A G++YLH VIH+D + N +++ + K++D L+R D N+ +
Sbjct: 127 ACGMSYLH---KRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPV 183
Query: 661 STHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT 699
++A E + SDV+S+GV+L EL+T
Sbjct: 184 K--------WMALESLVNKEYSSASDVWSFGVLLWELMT 214
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280 |
| >gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Score = 77.2 bits (190), Expect = 2e-15
Identities = 65/199 (32%), Positives = 97/199 (48%), Gaps = 12/199 (6%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLA--ELEMLSRLHHRNLVKLFGV 563
IGEG +GVVY+ G VA+K ++ + G A E+ +L L+H N+VKL V
Sbjct: 8 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 67
Query: 564 CIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRV 623
+N LV+E +H L+ + PL L +GLA+ H S RV
Sbjct: 68 IHTENKLYLVFEFLHQ-DLKKFMDASPLSGIPLPLIKSYLFQL--LQGLAFCH---SHRV 121
Query: 624 IHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAM-TGHLL 682
+HRD K N+L+ + K++DFGLAR + TH + T Y APE + +
Sbjct: 122 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGCKYYS 179
Query: 683 VKSDVYSYGVVLLELLTGR 701
D++S G + E++T R
Sbjct: 180 TAVDIWSLGCIFAEMVTRR 198
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284 |
| >gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Score = 76.6 bits (188), Expect = 3e-15
Identities = 75/286 (26%), Positives = 123/286 (43%), Gaps = 37/286 (12%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVK---VLKRANQHGGREFLAELEMLSRLHHRN 556
F + IG G F VYR L D + VA+K + + + ++ + E+++L +L+H N
Sbjct: 4 FQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPN 63
Query: 557 LVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLH 616
++K IEDN +V EL G L + K + K + + ++H
Sbjct: 64 VIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMH 123
Query: 617 EDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTH-VMGTFGYLAPEY 675
S RV+HRD K +N+ + K+ D GL R +K + H ++GT Y++PE
Sbjct: 124 ---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFF---SSKTTAAHSLVGTPYYMSPER 177
Query: 676 AMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDP 735
KSD++S G +L E + A P K L ++
Sbjct: 178 IHENGYNFKSDIWSLGCLLYE------------------MAALQSPFYGDKMNLFSLCQK 219
Query: 736 VIESNISYDTLV------KVAAIASMCVQPEVSHRPFMGEVVQALK 775
+ + + Y L K+ + SMC+ P+ RP +G V Q K
Sbjct: 220 IEQCD--YPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAK 263
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267 |
| >gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Score = 76.9 bits (189), Expect = 3e-15
Identities = 76/294 (25%), Positives = 118/294 (40%), Gaps = 39/294 (13%)
Query: 501 FHTSRIIGEGGFGVVYRGIL----DDGREVAVKVLKRA--NQHGGREFLAELEMLSRLHH 554
F R++G+G FG V L ++VAVK+LK + EFL E + H
Sbjct: 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDH 60
Query: 555 RNLVKLFGVCIEDNNR------CLVYELIHNGSLESHLH----GDDKVNGPLDWDARMKI 604
N++KL GV + + ++ + +G L + L G++ PL ++
Sbjct: 61 PNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQ--TLVRF 118
Query: 605 ALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHV 664
+ A G+ YL SS IHRD + N +L + T V+DFGL++
Sbjct: 119 MIDIASGMEYL---SSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCAS 175
Query: 665 MGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLL 723
+LA E SDV+++GV + E++T G+ P G EN + L
Sbjct: 176 KLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPY-----AGVEN--SEIYNYL 228
Query: 724 TTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLV 777
LK D L V + C PE RP + L+L+
Sbjct: 229 IKGNRLKQ----------PPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 76.4 bits (188), Expect = 3e-15
Identities = 61/218 (27%), Positives = 109/218 (50%), Gaps = 22/218 (10%)
Query: 506 IIGEGGFGVVYRGI-LDDGREVAVKVLK-----RANQHGGREFLA----ELEMLSRLHHR 555
+IG G FG VY G+ G +AVK ++ +++ R L E+ +L L H
Sbjct: 7 LIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHE 66
Query: 556 NLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYL 615
N+V+ G ++ ++ + E + GS+ + L+ L + +I +GL YL
Sbjct: 67 NIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQIL----KGLNYL 122
Query: 616 HEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR----TALDEGNKHISTHVMGTFGYL 671
H + +IHRD K +NIL+++ K+SDFG+++ +L + G+ ++
Sbjct: 123 H---NRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWM 179
Query: 672 APEYAMTGHLLVKSDVYSYGVVLLELLTGRKPV-DLSQ 708
APE K+D++S G +++E+LTG+ P D +Q
Sbjct: 180 APEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ 217
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 76.6 bits (188), Expect = 4e-15
Identities = 65/212 (30%), Positives = 102/212 (48%), Gaps = 22/212 (10%)
Query: 501 FHTSRIIGEGGFG-VVYRGILDDGREVAVKVL--KRANQHGGREF-LAELEMLSRLHHRN 556
F R++G+GGFG V + G+ A K L KR + G L E ++L +++ R
Sbjct: 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRF 61
Query: 557 LVKLFGVCIEDNNRCLVYELIHNGSLESHLH--GDDKVNGPLDWDARMKIALGAAR---G 611
+V L + CLV L++ G L+ H++ G+ + AA G
Sbjct: 62 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEG-------RAVFYAAEICCG 114
Query: 612 LAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYL 671
L LH++ R+++RD K NILL+ ++SD GLA + EG + I V GT GY+
Sbjct: 115 LEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLA-VHVPEG-QTIKGRV-GTVGYM 168
Query: 672 APEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
APE D ++ G +L E++ G+ P
Sbjct: 169 APEVVKNERYTFSPDWWALGCLLYEMIAGQSP 200
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Score = 75.8 bits (186), Expect = 4e-15
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 31/219 (14%)
Query: 501 FHTSRIIGEGGFGVVY--RGILDDG----REVAVKVLKRANQHGGREFLAELEMLSRLHH 554
+ + IGEG FG +Y + D +E+ + + + ++ E+ +L+++ H
Sbjct: 2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKK---EVILLAKMKH 58
Query: 555 RNLVKLFGVCIEDNNRCLVYELIHNGSLESHL---HG----DDKVNGPLDWDARMKIALG 607
N+V F E+ +V E G L + G +D++ L W ++I+L
Sbjct: 59 PNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQI---LSW--FVQISL- 112
Query: 608 AARGLAYLHEDSSPRVIHRDFKSSNILLEHD-FTPKVSDFGLARTALDEGNKHISTHVMG 666
GL ++H+ +++HRD KS NI L + K+ DFG+AR D + ++ +G
Sbjct: 113 ---GLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLND--SMELAYTCVG 164
Query: 667 TFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 705
T YL+PE K+D++S G VL EL T + P +
Sbjct: 165 TPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFE 203
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257 |
| >gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Score = 76.6 bits (188), Expect = 5e-15
Identities = 61/207 (29%), Positives = 99/207 (47%), Gaps = 12/207 (5%)
Query: 507 IGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCI 565
IGEG G+V G++VAVK + Q E+ ++ HH N+V ++ +
Sbjct: 30 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYL 89
Query: 566 EDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIH 625
+ +V E + G+L D + ++ + + L R L+YLH VIH
Sbjct: 90 VGDELWVVMEFLEGGALT-----DIVTHTRMNEEQIATVCLSVLRALSYLHNQG---VIH 141
Query: 626 RDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKS 685
RD KS +ILL D K+SDFG E K S ++GT ++APE +
Sbjct: 142 RDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKS--LVGTPYWMAPEVISRLPYGTEV 199
Query: 686 DVYSYGVVLLELLTGRKPVDLSQPPGQ 712
D++S G++++E++ G P ++PP Q
Sbjct: 200 DIWSLGIMVIEMIDGEPPY-FNEPPLQ 225
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292 |
| >gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 75.7 bits (187), Expect = 5e-15
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 26/207 (12%)
Query: 507 IGEGGFGVVYRGIL-DDGREVAVKVLKRAN-------QHGGREFLAELEMLSRLHHRNLV 558
+G GGFG V + R A+K +K+ + +H +E E+L +H +V
Sbjct: 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEH----IFSEKEILEECNHPFIV 56
Query: 559 KLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHED 618
KL+ + ++ E G L + L + ++ AR IA YLH
Sbjct: 57 KLYRTFKDKKYIYMLMEYCLGGELWTILRDRGLFD---EYTARFYIA-CVVLAFEYLHNR 112
Query: 619 SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVM-GTFGYLAPEYAM 677
+I+RD K N+LL+ + K+ DFG A+ L G K T GT Y+APE +
Sbjct: 113 G---IIYRDLKPENLLLDSNGYVKLVDFGFAKK-LKSGQK---TWTFCGTPEYVAPEIIL 165
Query: 678 T-GHLLVKSDVYSYGVVLLELLTGRKP 703
G+ D +S G++L ELLTGR P
Sbjct: 166 NKGYDFS-VDYWSLGILLYELLTGRPP 191
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262 |
| >gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Score = 75.7 bits (186), Expect = 5e-15
Identities = 62/205 (30%), Positives = 85/205 (41%), Gaps = 15/205 (7%)
Query: 507 IGEGGFGVVYRGILDDGREVAVKVLKR----ANQHGGREFLAELEMLSRLHHRNLVKLFG 562
IG G FG V G G A V+K A FL E++ L+H N+++ G
Sbjct: 3 IGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLG 62
Query: 563 VCIEDNNRCLVYELIHNGSLESHLHGD-DKVNGPLDWDARMKIALGAARGLAYLHEDSSP 621
CIE LV E G L+++L + V D ++A A GL +LH+
Sbjct: 63 QCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD-- 120
Query: 622 RVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGH- 680
IH D N L D + K+ D+GLA E +LAPE
Sbjct: 121 -FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQ 179
Query: 681 -LLV-----KSDVYSYGVVLLELLT 699
LL KS+++S GV + EL T
Sbjct: 180 DLLPKDQTKKSNIWSLGVTMWELFT 204
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269 |
| >gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Score = 77.0 bits (190), Expect = 6e-15
Identities = 65/217 (29%), Positives = 99/217 (45%), Gaps = 33/217 (15%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRA--NQHGGREFLAELEMLSRLHHRNLVKLF 561
IG G +GVV I G++VA+K + A + L EL++L H N++
Sbjct: 11 ENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNII--- 67
Query: 562 GVCIEDNNRC---------LVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAA-RG 611
I D R +V +L +ES LH + PL + ++ L RG
Sbjct: 68 --AIRDILRPPGADFKDVYVVMDL-----MESDLHHIIHSDQPLT-EEHIRYFLYQLLRG 119
Query: 612 LAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIS--THVMGTFG 669
L Y+H S VIHRD K SN+L+ D ++ DFG+AR +H T + T
Sbjct: 120 LKYIH---SANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRW 176
Query: 670 YLAPE--YAMTGHLLVKSDVYSYGVVLLELLTGRKPV 704
Y APE ++ + D++S G + E+L GR+ +
Sbjct: 177 YRAPELLLSLPEYTT-AIDMWSVGCIFAEML-GRRQL 211
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334 |
| >gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Score = 75.4 bits (185), Expect = 8e-15
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 11/208 (5%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVK---VLKRANQHGGREFLAELEMLSRLHHRN 556
F + IG G F VYR L DG VA+K + + + + E+++L +L+H N
Sbjct: 4 FRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 63
Query: 557 LVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLH 616
++K + IEDN +V EL G L + K + K + L ++H
Sbjct: 64 VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMH 123
Query: 617 EDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTH-VMGTFGYLAPEY 675
S RV+HRD K +N+ + K+ D GL R +K + H ++GT Y++PE
Sbjct: 124 ---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFF---SSKTTAAHSLVGTPYYMSPER 177
Query: 676 AMTGHLLVKSDVYSYGVVLLELLTGRKP 703
KSD++S G +L E+ + P
Sbjct: 178 IHENGYNFKSDIWSLGCLLYEMAALQSP 205
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 75.8 bits (186), Expect = 8e-15
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 507 IGEGGFGVVYR----GILDDGRE----VAVKVLK-RANQHGGREFLAELEMLSRL-HHRN 556
+GEG FG V GI D + VAVK+LK A + + ++E+EM+ + H+N
Sbjct: 23 LGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 82
Query: 557 LVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKV------------NGPLDWDARMKI 604
++ L G C +D ++ E G+L +L + + + +
Sbjct: 83 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSC 142
Query: 605 ALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHV 664
ARG+ YL +S + IHRD + N+L+ + K++DFGLAR + +T+
Sbjct: 143 TYQVARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNG 199
Query: 665 MGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT 699
++APE +SDV+S+GV++ E+ T
Sbjct: 200 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 234
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Score = 75.5 bits (186), Expect = 1e-14
Identities = 53/173 (30%), Positives = 86/173 (49%), Gaps = 13/173 (7%)
Query: 543 LAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARM 602
+ EL++L + +V +G D + E + GSL+ L K G + +
Sbjct: 47 IRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPENILG 102
Query: 603 KIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIST 662
KI++ RGL YL E ++HRD K SNIL+ K+ DFG++ +D ++
Sbjct: 103 KISIAVLRGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 156
Query: 663 HVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENL 715
+GT Y++PE H V+SD++S G+ L+E+ GR P+ PP + L
Sbjct: 157 SFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPI---PPPDAKEL 206
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308 |
| >gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Score = 75.4 bits (185), Expect = 1e-14
Identities = 70/212 (33%), Positives = 102/212 (48%), Gaps = 26/212 (12%)
Query: 507 IGEGGFGVVY--RGILDDGREVAVKVLKRANQHGG------REFLAELEMLSRLHHRNLV 558
IGEG +G V+ R + + GR VA+K ++ G RE +A L L H N+V
Sbjct: 9 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIRE-VAVLRHLETFEHPNVV 67
Query: 559 KLFGVCI-----EDNNRCLVYELIHNGSLESHLHGDDKVNGP-LDWDARMKIALGAARGL 612
+LF VC + LV+E + + L ++L DKV P + + + RGL
Sbjct: 68 RLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL---DKVPEPGVPTETIKDMMFQLLRGL 123
Query: 613 AYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLA 672
+LH S RV+HRD K NIL+ K++DFGLAR + T V+ T Y A
Sbjct: 124 DFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTLWYRA 177
Query: 673 PEYAMTGHLLVKSDVYSYGVVLLELLTGRKPV 704
PE + D++S G + E+ RKP+
Sbjct: 178 PEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 208
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 76.2 bits (187), Expect = 1e-14
Identities = 66/215 (30%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 507 IGEGGFGVVYR----GILDD----GREVAVKVLKR-ANQHGGREFLAELEMLSRL-HHRN 556
+GEG FG V GI D VAVK+LK A + ++E+EM+ + H+N
Sbjct: 20 LGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKN 79
Query: 557 LVKLFGVCIEDNNRCLVYELIHNGSLESHLHGD---------DKVNGP---LDWDARMKI 604
++ L G C +D ++ E G+L +L D P L + +
Sbjct: 80 IINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSC 139
Query: 605 ALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHV 664
A ARG+ YL +S + IHRD + N+L+ D K++DFGLAR + +T+
Sbjct: 140 AYQVARGMEYL---ASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNG 196
Query: 665 MGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT 699
++APE +SDV+S+GV+L E+ T
Sbjct: 197 RLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFT 231
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Score = 75.1 bits (185), Expect = 1e-14
Identities = 66/212 (31%), Positives = 104/212 (49%), Gaps = 16/212 (7%)
Query: 499 NGFHTSRIIGEGGFGVVYRG-ILDDGREVAVKVLKRA-NQHGGREFLAELEMLSRLHH-R 555
N IG G G VY+ G +AVK ++R N+ + L +L+++ + H
Sbjct: 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCP 74
Query: 556 NLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYL 615
+VK +G I D++ + EL+ + L+ L ++ GP+ D K+ + + L YL
Sbjct: 75 YIVKCYGYFITDSDVFICMELM-STCLDKLLK---RIQGPIPEDILGKMTVAIVKALHYL 130
Query: 616 HEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEY 675
E VIHRD K SNILL+ K+ DFG++ +D K T G Y+APE
Sbjct: 131 KEKHG--VIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAK---TRSAGCAAYMAPER 185
Query: 676 ----AMTGHLLVKSDVYSYGVVLLELLTGRKP 703
+++DV+S G+ L+EL TG+ P
Sbjct: 186 IDPPDPNPKYDIRADVWSLGISLVELATGQFP 217
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296 |
| >gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Score = 74.4 bits (183), Expect = 2e-14
Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 14/200 (7%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGG-REFLAELEMLSRLHHRNLVKLFGVC 564
+GEG + VY+G G VA+K + + G + E+ ++ L H N+V+L V
Sbjct: 8 LGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVI 67
Query: 565 IEDNNRCLVYELIHNGSLESHL--HGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPR 622
+N LV+E + + L+ ++ HG G LD + +G+A+ HE+ R
Sbjct: 68 HTENKLMLVFEYM-DKDLKKYMDTHGV---RGALDPNTVKSFTYQLLKGIAFCHEN---R 120
Query: 623 VIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLL 682
V+HRD K N+L+ K++DFGLAR N S V+ T Y AP+ +
Sbjct: 121 VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNT-FSNEVV-TLWYRAPDVLLGSRTY 178
Query: 683 VKS-DVYSYGVVLLELLTGR 701
S D++S G ++ E++TGR
Sbjct: 179 STSIDIWSVGCIMAEMITGR 198
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 75.2 bits (185), Expect = 2e-14
Identities = 65/206 (31%), Positives = 107/206 (51%), Gaps = 17/206 (8%)
Query: 505 RIIGEGGFGVVY--RGIL--DDGREVAVKVLKRANQHGGREFLAELE--MLSRLHHRNLV 558
+++G+G FG V+ R I D G+ A+KVLK+A ++E +L+ ++H +V
Sbjct: 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIV 61
Query: 559 KLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHED 618
KL + L+ + + G L + L + + D + +A A L +LH
Sbjct: 62 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFT---EEDVKFYLA-ELALALDHLH-- 115
Query: 619 SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYA-M 677
S +I+RD K NILL+ + K++DFGL++ ++D K S GT Y+APE
Sbjct: 116 -SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMAPEVVNR 172
Query: 678 TGHLLVKSDVYSYGVVLLELLTGRKP 703
GH +D +S+GV++ E+LTG P
Sbjct: 173 RGHTQ-SADWWSFGVLMFEMLTGSLP 197
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Score = 74.7 bits (184), Expect = 2e-14
Identities = 61/208 (29%), Positives = 102/208 (49%), Gaps = 18/208 (8%)
Query: 505 RIIGEGGFGVVYRGILDDGREV-AVKVLKR--ANQHGGREF-LAELEMLSRL-HHRNLVK 559
+++G+G FG V L E+ AVKVLK+ Q E + E +L+ H L +
Sbjct: 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQ 60
Query: 560 LFGVCIEDNNR-CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHED 618
L C + +R V E ++ G L H+ + + P +I LG L +LHE
Sbjct: 61 LHS-CFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLG----LQFLHER 115
Query: 619 SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMT 678
+I+RD K N+LL+ + K++DFG+ + + G ++ GT Y+APE ++
Sbjct: 116 G---IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVT--TSTFCGTPDYIAPE-ILS 169
Query: 679 GHLLVKS-DVYSYGVVLLELLTGRKPVD 705
+ D ++ GV+L E+L G+ P +
Sbjct: 170 YQPYGPAVDWWALGVLLYEMLAGQSPFE 197
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318 |
| >gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Score = 73.7 bits (181), Expect = 3e-14
Identities = 61/203 (30%), Positives = 98/203 (48%), Gaps = 24/203 (11%)
Query: 507 IGEGGFGVVYRGIL----DDGREVAVKVL--KRANQHGGREFLAELEMLSRLHHRNLVKL 560
IGEG FG + IL +DG++ +K + + + E E+ +LS + H N+V+
Sbjct: 8 IGEGSFG---KAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQY 64
Query: 561 FGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGP----LDWDARMKIALGAARGLAYLH 616
E+ N +V + G L ++ V P LDW ++ +AL ++H
Sbjct: 65 QESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLAL------KHVH 118
Query: 617 EDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYA 676
+ +++HRD KS NI L D T K+ DFG+AR ++ +GT YL+PE
Sbjct: 119 DR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVL--NSTVELARTCIGTPYYLSPEIC 173
Query: 677 MTGHLLVKSDVYSYGVVLLELLT 699
KSD+++ G VL E+ T
Sbjct: 174 ENRPYNNKSDIWALGCVLYEMCT 196
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256 |
| >gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Score = 73.4 bits (180), Expect = 3e-14
Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 28/205 (13%)
Query: 507 IGEGGFGVVYRGILDDGREVA---VKVLKRA-----NQHGGREFLAELEMLSRLHHRNLV 558
+G+G FG VY ++ D + VA +KVLK N + + E ++LS+L H +V
Sbjct: 8 LGKGSFGTVY--LVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIV 65
Query: 559 KLFGVCIEDNNRCLVYELIHNGSLESHL----HGDDKVNGP--LDWDARMKIALGAARGL 612
K +E + C++ E L+ L H ++ +W ++ + G+
Sbjct: 66 KFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLL------GV 119
Query: 613 AYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLA 672
Y+H+ R++HRD K+ NI L+++ K+ DFG++R + G+ ++T GT Y++
Sbjct: 120 HYMHQR---RILHRDLKAKNIFLKNNLL-KIGDFGVSRLLM--GSCDLATTFTGTPYYMS 173
Query: 673 PEYAMTGHLLVKSDVYSYGVVLLEL 697
PE KSD++S G +L E+
Sbjct: 174 PEALKHQGYDSKSDIWSLGCILYEM 198
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260 |
| >gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Score = 74.2 bits (183), Expect = 3e-14
Identities = 67/212 (31%), Positives = 102/212 (48%), Gaps = 32/212 (15%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREF----LAELEMLSRLHHRNLVKLF 561
I EG +GVVYR G VA+K LK + G F L E+ +L +L H N+V +
Sbjct: 13 IEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEG--FPITSLREINILLKLQHPNIVTVK 70
Query: 562 GVCIEDNNR--CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDS 619
V + N +V E + + L+S + + + P + L G+A+LH++
Sbjct: 71 EVVVGSNLDKIYMVMEYVEH-DLKSLM---ETMKQPFLQSEVKCLMLQLLSGVAHLHDNW 126
Query: 620 SPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTG 679
++HRD K+SN+LL + K+ DFGLAR T ++ T Y APE
Sbjct: 127 ---ILHRDLKTSNLLLNNRGILKICDFGLAREY--GSPLKPYTQLVVTLWYRAPE----- 176
Query: 680 HLLV-------KSDVYSYGVVLLELLTGRKPV 704
LL+ D++S G + ELLT +KP+
Sbjct: 177 -LLLGAKEYSTAIDMWSVGCIFAELLT-KKPL 206
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293 |
| >gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Score = 74.4 bits (182), Expect = 3e-14
Identities = 73/228 (32%), Positives = 103/228 (45%), Gaps = 27/228 (11%)
Query: 486 AKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGR----- 540
A+ F D EK F R IG G FG VY D R V +K+ + G +
Sbjct: 15 AELFFKEDPEKL---FTDLREIGHGSFGAVY--FARDVRTNEVVAIKKMSYSGKQSNEKW 69
Query: 541 -EFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWD 599
+ + E++ L R+ H N ++ G + ++ LV E GS L K PL
Sbjct: 70 QDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCL-GSASDLLEVHKK---PLQEV 125
Query: 600 ARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH 659
I GA +GLAYLH S +IHRD K+ NILL K++DFG A A
Sbjct: 126 EIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASIA------S 176
Query: 660 ISTHVMGTFGYLAPEYAMT---GHLLVKSDVYSYGVVLLELLTGRKPV 704
+ +GT ++APE + G K DV+S G+ +EL + P+
Sbjct: 177 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 224
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317 |
| >gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Score = 74.3 bits (182), Expect = 3e-14
Identities = 73/225 (32%), Positives = 104/225 (46%), Gaps = 24/225 (10%)
Query: 486 AKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGRE-VAVKVLKRANQHGG---RE 541
A F +D E+ G H IG G FG VY E VAVK + + + ++
Sbjct: 11 ADLFYKDDPEEIFVGLHE---IGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQD 67
Query: 542 FLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDAR 601
+ E++ L +L H N ++ G ++++ LV E GS L K PL
Sbjct: 68 IIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL-GSASDLLEVHKK---PLQEVEI 123
Query: 602 MKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIS 661
I GA +GLAYLH S +IHRD K+ NILL K++DFG A + +
Sbjct: 124 AAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASKS------SPA 174
Query: 662 THVMGTFGYLAPEYAMT---GHLLVKSDVYSYGVVLLELLTGRKP 703
+GT ++APE + G K DV+S G+ +E L RKP
Sbjct: 175 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE-LAERKP 218
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 73.9 bits (181), Expect = 3e-14
Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 12/205 (5%)
Query: 507 IGEGGFGVV-YRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCI 565
IGEG G+V + G+ VAVK + Q E+ ++ H N+V+++ +
Sbjct: 28 IGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 566 EDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIH 625
+ +V E + G+L D + ++ + + L + L+ LH + VIH
Sbjct: 88 VGDELWVVMEFLEGGALT-----DIVTHTRMNEEQIAAVCLAVLKALSVLH---AQGVIH 139
Query: 626 RDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKS 685
RD KS +ILL HD K+SDFG E + S ++GT ++APE +
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS--LVGTPYWMAPELISRLPYGPEV 197
Query: 686 DVYSYGVVLLELLTGRKPVDLSQPP 710
D++S G++++E++ G P ++PP
Sbjct: 198 DIWSLGIMVIEMVDGEPPY-FNEPP 221
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Score = 73.3 bits (180), Expect = 4e-14
Identities = 66/277 (23%), Positives = 122/277 (44%), Gaps = 34/277 (12%)
Query: 507 IGEGGFGVVYRGILDDG-------REVAVKVL-----KRANQHGGREFLAELEML-SRLH 553
+G G FG VY+ + +E+ V KR + ++E+ ++ +L
Sbjct: 8 LGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLR 67
Query: 554 HRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLA 613
H N+V+ + +E++ +V +LI L H + + + I + L
Sbjct: 68 HPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALR 127
Query: 614 YLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAP 673
YLH++ R++HRD +NI+L D ++DFGLA+ + + T V+GT Y P
Sbjct: 128 YLHKEK--RIVHRDLTPNNIMLGEDDKVTITDFGLAK---QKQPESKLTSVVGTILYSCP 182
Query: 674 EYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTII 733
E K+DV+++G +L ++ T L P N+++ A ++
Sbjct: 183 EIVKNEPYGEKADVWAFGCILYQMCT------LQPPFYSTNMLSLATKIVEAV------Y 230
Query: 734 DPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEV 770
+P+ E S D V + + C+ P+ RP + +V
Sbjct: 231 EPLPEGMYSED----VTDVITSCLTPDAEARPDIIQV 263
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 73.8 bits (181), Expect = 4e-14
Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 18/208 (8%)
Query: 505 RIIGEGGFG-VVYRGILDDGREVAVKVLKRAN--QHGGRE-FLAELEMLSRLH-HRNLVK 559
R++G+G FG V+ + + GR AVKVLK+ Q E + E +LS H L +
Sbjct: 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQ 60
Query: 560 LFGVCIEDNNRCL-VYELIHNGSLESHLHGDDKVNGPLDWDARMKI-ALGAARGLAYLHE 617
L+ C + +R V E ++ G L H+ + + +AR + A L +LH+
Sbjct: 61 LY-CCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFD-----EARARFYAAEITSALMFLHD 114
Query: 618 DSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAM 677
+I+RD K N+LL+H+ K++DFG+ + + G K ST GT Y+APE
Sbjct: 115 KG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG-KTTSTFC-GTPDYIAPEILQ 169
Query: 678 TGHLLVKSDVYSYGVVLLELLTGRKPVD 705
D ++ GV+L E+L G P +
Sbjct: 170 EMLYGPSVDWWAMGVLLYEMLCGHAPFE 197
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Score = 72.7 bits (178), Expect = 6e-14
Identities = 65/217 (29%), Positives = 101/217 (46%), Gaps = 21/217 (9%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRL-HHRNLV 558
F ++G G +G VY+G + G+ A+KV+ + E E+ ML + HHRN+
Sbjct: 18 FELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMD-VTEDEEEEIKLEINMLKKYSHHRNIA 76
Query: 559 KLFGVCIE------DNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGL 612
+G I+ D+ LV E GS+ + DW A I RGL
Sbjct: 77 TYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAY--ICREILRGL 134
Query: 613 AYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLA 672
A+LH + +VIHRD K N+LL + K+ DFG++ LD +T + GT ++A
Sbjct: 135 AHLH---AHKVIHRDIKGQNVLLTENAEVKLVDFGVS-AQLDRTVGRRNTFI-GTPYWMA 189
Query: 673 PEYAMTGH-----LLVKSDVYSYGVVLLELLTGRKPV 704
PE +SD++S G+ +E+ G P+
Sbjct: 190 PEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPL 226
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282 |
| >gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Score = 72.7 bits (178), Expect = 8e-14
Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 12/207 (5%)
Query: 501 FHTSRIIGEGGFG-VVYRGILDDGREVAVKVL--KRANQHGGREF-LAELEMLSRLHHRN 556
F R++G+GGFG V + G+ A K L KR + G L E ++L +++ +
Sbjct: 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQF 61
Query: 557 LVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLH 616
+V L + CLV +++ G L+ H++ + N + + + A GL LH
Sbjct: 62 VVNLAYAYETKDALCLVLTIMNGGDLKFHIY--NMGNPGFEEERALFYAAEILCGLEDLH 119
Query: 617 EDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYA 676
++ ++RD K NILL+ ++SD GLA + EG I V GT GY+APE
Sbjct: 120 REN---TVYRDLKPENILLDDYGHIRISDLGLA-VKIPEGES-IRGRV-GTVGYMAPEVL 173
Query: 677 MTGHLLVKSDVYSYGVVLLELLTGRKP 703
+ D + G ++ E++ G+ P
Sbjct: 174 NNQRYTLSPDYWGLGCLIYEMIEGQSP 200
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285 |
| >gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Score = 72.8 bits (178), Expect = 9e-14
Identities = 74/227 (32%), Positives = 103/227 (45%), Gaps = 28/227 (12%)
Query: 486 AKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGR----- 540
A+ F +D EK F R IG G FG VY D R V +K+ + G +
Sbjct: 5 AELFFKDDPEKL---FSDLREIGHGSFGAVY--FARDVRNSEVVAIKKMSYSGKQSNEKW 59
Query: 541 -EFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWD 599
+ + E+ L +L H N ++ G + ++ LV E GS L K PL
Sbjct: 60 QDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKK---PLQEV 115
Query: 600 ARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH 659
+ GA +GLAYLH S +IHRD K+ NILL K+ DFG A + + N
Sbjct: 116 EIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSA-SIMAPANXF 171
Query: 660 ISTHVMGTFGYLAPEYAMT---GHLLVKSDVYSYGVVLLELLTGRKP 703
+ GT ++APE + G K DV+S G+ +E L RKP
Sbjct: 172 V-----GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE-LAERKP 212
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308 |
| >gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Score = 73.2 bits (180), Expect = 9e-14
Identities = 69/228 (30%), Positives = 105/228 (46%), Gaps = 42/228 (18%)
Query: 500 GFHTSRIIGEGGFGVV----YRGILDDGREVAVK----------VLKRANQHGGREFLAE 545
+ + +G+G +G+V ++ VA+K + KRA L E
Sbjct: 1 RYELIKELGQGAYGIVCSARNAETSEEET-VAIKKITNVFSKKILAKRA--------LRE 51
Query: 546 LEMLSRLH-HRNLVKLFGVCIEDN---NRCLVYELIHNGSLESHLHGDDKVNGPLDWDAR 601
L++L H+N+ L+ + I N +YE + +E+ LH + PL DA
Sbjct: 52 LKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEEL----MEADLHQIIRSGQPLT-DAH 106
Query: 602 MKIAL-GAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR---TALDEGN 657
+ + GL Y+H S V+HRD K N+L+ D K+ DFGLAR E
Sbjct: 107 FQSFIYQILCGLKYIH---SANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENA 163
Query: 658 KHISTHVMGTFGYLAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPV 704
++ +V T Y APE ++ K+ DV+S G +L ELL GRKPV
Sbjct: 164 GFMTEYV-ATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELL-GRKPV 209
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 72.6 bits (178), Expect = 9e-14
Identities = 58/198 (29%), Positives = 93/198 (46%), Gaps = 11/198 (5%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCI 565
IG+G G VY I + G+EVA+K + Q + E+ ++ H N+V +
Sbjct: 27 IGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYL 86
Query: 566 EDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIH 625
+ +V E + GSL D +D + + L +LH S +VIH
Sbjct: 87 VGDELWVVMEYLAGGSLT-----DVVTETCMDEGQIAAVCRECLQALEFLH---SNQVIH 138
Query: 626 RDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKS 685
RD KS NILL D + K++DFG E +K + ++GT ++APE K
Sbjct: 139 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--STMVGTPYWMAPEVVTRKAYGPKV 196
Query: 686 DVYSYGVVLLELLTGRKP 703
D++S G++ +E++ G P
Sbjct: 197 DIWSLGIMAIEMVEGEPP 214
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Score = 72.1 bits (177), Expect = 1e-13
Identities = 45/115 (39%), Positives = 61/115 (53%), Gaps = 9/115 (7%)
Query: 603 KIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIST 662
KIA+ + L YLH S VIHRD K SN+L+ + K+ DFG++ +D K I
Sbjct: 107 KIAVSIVKALEYLHSKLS--VIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAKTIDA 164
Query: 663 HVMGTFGYLAPEY----AMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQE 713
G Y+APE VKSDV+S G+ ++EL TGR P D + P Q+
Sbjct: 165 ---GCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQ 216
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283 |
| >gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein | Back alignment and domain information |
|---|
Score = 75.3 bits (185), Expect = 1e-13
Identities = 62/219 (28%), Positives = 92/219 (42%), Gaps = 37/219 (16%)
Query: 521 DDGREVAVKVLKRANQHGGRE---FLAELEMLSRLHHRNLVKLF--GVCIEDNNRCLVYE 575
G EVA+K+L+ + F E + +RL+H N+V L G V+E
Sbjct: 1 MTGHEVAIKLLRTDAPEEEHQRARFRRETALCARLYHPNIVALLDSGEA-PPGLLFAVFE 59
Query: 576 LIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILL 635
+ +L L D G L ++ L LA H ++HRD K NI++
Sbjct: 60 YVPGRTLREVLAAD----GALPAGETGRLMLQVLDALACAHNQG---IVHRDLKPQNIMV 112
Query: 636 -EHDFTP--KVSDFGLART-----ALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDV 687
+ P KV DFG+ D +T V+GT Y APE + SD+
Sbjct: 113 SQTGVRPHAKVLDFGIGTLLPGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDL 172
Query: 688 YSYGVVLLELLTGRK----------------PVDLSQPP 710
Y++G++ LE LTG++ PVD+S PP
Sbjct: 173 YAWGLIFLECLTGQRVVQGASVAEILYQQLSPVDVSLPP 211
|
This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266 |
| >gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 72.8 bits (179), Expect = 1e-13
Identities = 72/250 (28%), Positives = 101/250 (40%), Gaps = 49/250 (19%)
Query: 501 FHTSRIIGEGGFGVVYRGILDDGRE-VAVKVLKR-----ANQHGGREFLAELEMLSRLHH 554
F +G+GG+G V+ D E VA+K +K+ N+ R L E ++L+
Sbjct: 3 FQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEV--RHVLTERDILTTTKS 60
Query: 555 RNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWD------ARMKIALGA 608
LVKL +D L E + G + L+ G L D A M A+ A
Sbjct: 61 EWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNN----LGVLSEDHARFYMAEMFEAVDA 116
Query: 609 ARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTF 668
L Y IHRD K N L++ K++DFGL++ + N V+G+
Sbjct: 117 LHELGY---------IHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANS-----VVGSP 162
Query: 669 GYLAPE------YAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQ-ENLVAWA-- 719
Y+APE Y T D +S G +L E L G P S P ENL W
Sbjct: 163 DYMAPEVLRGKGYDFT------VDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKET 216
Query: 720 --RPLLTTKE 727
RP+
Sbjct: 217 LQRPVYDDPR 226
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333 |
| >gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 71.8 bits (176), Expect = 1e-13
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 26/214 (12%)
Query: 501 FHTSRIIGEGGFG-VVYRGILDDGREVAVKVLKRA---NQHGGREFLAELEMLSRLHHRN 556
F R++G+GGFG V + G+ A K L++ + G L E ++L +++ R
Sbjct: 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 61
Query: 557 LVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLH 616
+V L + CLV L++ G L+ H++ + N D + + A GL LH
Sbjct: 62 VVSLAYAYETKDALCLVLTLMNGGDLKFHIY--NMGNPGFDEERAVFYAAEITCGLEDLH 119
Query: 617 EDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYA 676
R+++RD K NILL+ ++SD GLA + EG I V GT GY+APE
Sbjct: 120 ---RERIVYRDLKPENILLDDYGHIRISDLGLA-VEIPEGET-IRGRV-GTVGYMAPE-- 171
Query: 677 MTGHLLVKSDVYSY-------GVVLLELLTGRKP 703
+VK++ Y++ G ++ E++ G+ P
Sbjct: 172 -----VVKNERYTFSPDWWGLGCLIYEMIEGKSP 200
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 71.6 bits (175), Expect = 1e-13
Identities = 60/201 (29%), Positives = 95/201 (47%), Gaps = 16/201 (7%)
Query: 507 IGEGGFGVVYRGILDDGRE---VAVKVLKRANQHGGREFLA-ELEMLSRLHHRNLVKLFG 562
IG+G FG V++GI D R VA+K++ E + E+ +LS+ + K +G
Sbjct: 12 IGKGSFGEVFKGI--DNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 69
Query: 563 VCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPR 622
++ ++ E + GS L GP D + +GL YLH S +
Sbjct: 70 SYLKGTKLWIIMEYLGGGSALDLLRA-----GPFDEFQIATMLKEILKGLDYLH---SEK 121
Query: 623 VIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLL 682
IHRD K++N+LL K++DFG+A D K + +GT ++APE
Sbjct: 122 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIQQSAYD 179
Query: 683 VKSDVYSYGVVLLELLTGRKP 703
K+D++S G+ +EL G P
Sbjct: 180 SKADIWSLGITAIELAKGEPP 200
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Score = 71.6 bits (175), Expect = 2e-13
Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 11/206 (5%)
Query: 499 NGFHTSRIIGEGGFGVVYRGILDDGRE-VAVKVLKRA--NQHGGREFLAELEMLSRLHHR 555
N F ++GEG +GVV + + +E VA+K K + N+ L EL+ML L
Sbjct: 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQE 60
Query: 556 NLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYL 615
N+V+L LV+E + LE ++ NG R I + + +
Sbjct: 61 NIVELKEAFRRRGKLYLVFEYVEKNMLELL---EEMPNGVPPEKVRSYI-YQLIKAIHWC 116
Query: 616 HEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEY 675
H++ ++HRD K N+L+ H+ K+ DFG AR L EG+ T + T Y +PE
Sbjct: 117 HKND---IVHRDIKPENLLISHNDVLKLCDFGFARN-LSEGSNANYTEYVATRWYRSPEL 172
Query: 676 AMTGHLLVKSDVYSYGVVLLELLTGR 701
+ D++S G +L EL G+
Sbjct: 173 LLGAPYGKAVDMWSVGCILGELSDGQ 198
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287 |
| >gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Score = 71.6 bits (175), Expect = 2e-13
Identities = 55/197 (27%), Positives = 98/197 (49%), Gaps = 14/197 (7%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCI 565
+G+G FG VY+ + G A KV+ ++ +++ E+++L+ H N+VKL
Sbjct: 13 LGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 72
Query: 566 EDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIH 625
+NN ++ E G++++ + ++ PL + L YLHE+ ++IH
Sbjct: 73 YENNLWILIEFCAGGAVDAVML---ELERPLTEPQIRVVCKQTLEALNYLHEN---KIIH 126
Query: 626 RDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGH----- 680
RD K+ NIL D K++DFG+ +A + +GT ++APE M
Sbjct: 127 RDLKAGNILFTLDGDIKLADFGV--SAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRP 184
Query: 681 LLVKSDVYSYGVVLLEL 697
K+DV+S G+ L+E+
Sbjct: 185 YDYKADVWSLGITLIEM 201
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282 |
| >gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Score = 71.5 bits (175), Expect = 2e-13
Identities = 65/212 (30%), Positives = 99/212 (46%), Gaps = 27/212 (12%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGG------REFLAELEMLSRLHHRNLVK 559
IG G +G VY+ G VA+K ++ G RE +A L+ L H N+V+
Sbjct: 8 IGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVRE-VALLKRLEAFDHPNIVR 66
Query: 560 LFGVCI-----EDNNRCLVYELIHNGSLESHLHGDDKVNGP-LDWDARMKIALGAARGLA 613
L VC + LV+E + + L ++L DKV P L + + RGL
Sbjct: 67 LMDVCATSRTDRETKVTLVFEHV-DQDLRTYL---DKVPPPGLPAETIKDLMRQFLRGLD 122
Query: 614 YLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIS-THVMGTFGYLA 672
+LH + ++HRD K NIL+ K++DFGLAR + ++ T V+ T Y A
Sbjct: 123 FLHAN---CIVHRDLKPENILVTSGGQVKLADFGLARIY----SCQMALTPVVVTLWYRA 175
Query: 673 PEYAMTGHLLVKSDVYSYGVVLLELLTGRKPV 704
PE + D++S G + E+ RKP+
Sbjct: 176 PEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 206
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288 |
| >gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Score = 71.3 bits (174), Expect = 2e-13
Identities = 64/217 (29%), Positives = 100/217 (46%), Gaps = 21/217 (9%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRL-HHRNLV 558
F ++G G +G VY+G + G+ A+KV+ E E+ ML + HHRN+
Sbjct: 8 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE-EEIKQEINMLKKYSHHRNIA 66
Query: 559 KLFGVCIE------DNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGL 612
+G I+ D+ LV E GS+ + +W A I RGL
Sbjct: 67 TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY--ICREILRGL 124
Query: 613 AYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLA 672
++LH+ +VIHRD K N+LL + K+ DFG++ LD +T + GT ++A
Sbjct: 125 SHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVS-AQLDRTVGRRNTFI-GTPYWMA 179
Query: 673 PEYAMTGH-----LLVKSDVYSYGVVLLELLTGRKPV 704
PE KSD++S G+ +E+ G P+
Sbjct: 180 PEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 216
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272 |
| >gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Score = 71.4 bits (175), Expect = 2e-13
Identities = 63/202 (31%), Positives = 99/202 (49%), Gaps = 17/202 (8%)
Query: 507 IGEGGFGVVYRGILDDGRE-VAVKVLKRANQHGGREFLA--ELEMLSRLHHRNLVKLFGV 563
IGEG +GVVY+ E +A+K ++ + G A E+ +L + H N+V+L V
Sbjct: 10 IGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDV 69
Query: 564 CIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARM-KIAL-GAARGLAYLHEDSSP 621
+ LV+E + L+ H D + + R+ K L RG+AY H S
Sbjct: 70 VHSEKRLYLVFEYL---DLDLKKHMDSSPD--FAKNPRLIKTYLYQILRGIAYCH---SH 121
Query: 622 RVIHRDFKSSNILLEHDF-TPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAM-TG 679
RV+HRD K N+L++ K++DFGLAR A + TH + T Y APE + +
Sbjct: 122 RVLHRDLKPQNLLIDRRTNALKLADFGLAR-AFGIPVRTF-THEVVTLWYRAPEILLGSR 179
Query: 680 HLLVKSDVYSYGVVLLELLTGR 701
H D++S G + E++ +
Sbjct: 180 HYSTPVDIWSVGCIFAEMVNQK 201
|
Length = 294 |
| >gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Score = 71.8 bits (176), Expect = 3e-13
Identities = 80/257 (31%), Positives = 124/257 (48%), Gaps = 34/257 (13%)
Query: 498 TNGFHTSRIIGEGGFGVV--YRGILDDGREVAVKVLKR--ANQHGGREFLAELEMLSRLH 553
TN + + +G G FG+V R L G+ VA+K + + + + EL++L L
Sbjct: 9 TNRYVDLQPVGMGAFGLVCSARDQLT-GQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLR 67
Query: 554 HRNLVKLFGVCI---EDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAAR 610
H N++ L + I ED V EL L + LH + PL+ R
Sbjct: 68 HENIISLSDIFISPLEDIY--FVTEL-----LGTDLHRLLT-SRPLEKQFIQYFLYQILR 119
Query: 611 GLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGY 670
GL Y+H S V+HRD K SNIL+ + K+ DFGLAR + ++ST Y
Sbjct: 120 GLKYVH---SAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGYVSTRY-----Y 171
Query: 671 LAPEYAMTGHLL-VKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGL 729
APE +T V+ D++S G + E+L G KP+ PG++++ ++ ++T + L
Sbjct: 172 RAPEIMLTWQKYDVEVDIWSAGCIFAEMLEG-KPLF----PGKDHVNQFS--IIT--DLL 222
Query: 730 KTIIDPVIESNISYDTL 746
T D VI + S +TL
Sbjct: 223 GTPPDDVINTICSENTL 239
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328 |
| >gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Score = 70.8 bits (173), Expect = 4e-13
Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 12/207 (5%)
Query: 501 FHTSRIIGEGGFG-VVYRGILDDGREVAVKVL--KRANQHGGREF-LAELEMLSRLHHRN 556
F R++G+GGFG V + G+ A K L KR + G L E +L +++ R
Sbjct: 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRF 61
Query: 557 LVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLH 616
+V L + CLV +++ G L+ H++ + N D + A GL L
Sbjct: 62 VVSLAYAYETKDALCLVLTIMNGGDLKFHIY--NMGNPGFDEQRAIFYAAELCCGLEDLQ 119
Query: 617 EDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYA 676
+ R+++RD K NILL+ ++SD GLA + EG + V GT GY+APE
Sbjct: 120 RE---RIVYRDLKPENILLDDRGHIRISDLGLA-VQIPEGET-VRGRV-GTVGYMAPEVI 173
Query: 677 MTGHLLVKSDVYSYGVVLLELLTGRKP 703
D + G ++ E++ G+ P
Sbjct: 174 NNEKYTFSPDWWGLGCLIYEMIQGQSP 200
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 71.2 bits (174), Expect = 4e-13
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 13/175 (7%)
Query: 541 EFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDA 600
+ + EL++L + +V +G D + E + GSL+ L K G +
Sbjct: 49 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQI 104
Query: 601 RMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHI 660
K+++ +GL YL E +++HRD K SNIL+ K+ DFG++ +D +
Sbjct: 105 LGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----M 158
Query: 661 STHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENL 715
+ +GT Y++PE H V+SD++S G+ L+E+ GR P+ PP + L
Sbjct: 159 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPI---PPPDAKEL 210
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 70.9 bits (173), Expect = 4e-13
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 12/228 (5%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCI 565
IG+G G VY + + G+EVA++ + Q + E+ ++ + N+V +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 566 EDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIH 625
+ +V E + GSL D +D + + L +LH S +VIH
Sbjct: 88 VGDELWVVMEYLAGGSLT-----DVVTETCMDEGQIAAVCRECLQALEFLH---SNQVIH 139
Query: 626 RDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKS 685
RD KS NILL D + K++DFG E +K + ++GT ++APE K
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--STMVGTPYWMAPEVVTRKAYGPKV 197
Query: 686 DVYSYGVVLLELLTGRKPVDLSQPPGQENLVAW-ARPLLTTKEGLKTI 732
D++S G++ +E++ G P P L+A P L E L I
Sbjct: 198 DIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI 245
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 69.9 bits (171), Expect = 4e-13
Identities = 61/224 (27%), Positives = 110/224 (49%), Gaps = 36/224 (16%)
Query: 507 IGEGGFGVVYRGI----LDDGR----EVAVKVLKRANQHGGREFLAELEMLSRLHHRNLV 558
+G+G F +++GI D G EV +KVL +++++ F M+S+L H++LV
Sbjct: 3 LGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLV 62
Query: 559 KLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNG---PLDWDARMKIALGAARGLAYL 615
+GVC+ + +V E + GSL+++L K N + W ++++A A L +L
Sbjct: 63 LNYGVCVCGDESIMVQEYVKFGSLDTYL----KKNKNLINISW--KLEVAKQLAWALHFL 116
Query: 616 HEDSSPRVIHRDFKSSNILL--EHDF---TP---KVSDFGLARTALDEGNKHISTHVMGT 667
+ + H + + N+LL E D P K+SD G++ T L K I ++
Sbjct: 117 EDKG---LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVL---PKEI---LLER 167
Query: 668 FGYLAPE-YAMTGHLLVKSDVYSYGVVLLELLTG-RKPVDLSQP 709
++ PE +L + +D +S+G L E+ +G KP+
Sbjct: 168 IPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDS 211
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258 |
| >gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Score = 69.7 bits (170), Expect = 5e-13
Identities = 63/210 (30%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLK--RANQHGGREFLA---ELEMLSRLHHRNLV 558
+++G+G FG VY D GRE+AVK ++ + +E A E+++L L H +V
Sbjct: 8 KLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIV 67
Query: 559 KLFGVCIEDNNRCL--VYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLH 616
+ +G + R L E + GS++ L K G L + K G++YLH
Sbjct: 68 QYYGCLRDPMERTLSIFMEHMPGGSIKDQL----KSYGALTENVTRKYTRQILEGVSYLH 123
Query: 617 EDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR---TALDEGNKHISTHVMGTFGYLAP 673
S ++HRD K +NIL + K+ DFG ++ T G S V GT +++P
Sbjct: 124 ---SNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKS--VTGTPYWMSP 178
Query: 674 EYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
E K+D++S G ++E+LT + P
Sbjct: 179 EVISGEGYGRKADIWSVGCTVVEMLTEKPP 208
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265 |
| >gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 70.8 bits (173), Expect = 6e-13
Identities = 68/209 (32%), Positives = 96/209 (45%), Gaps = 32/209 (15%)
Query: 507 IGEGGFGVVYRGILDDGRE-VAVKVLKRANQ---HGGREFLAELEMLSRLHHRNLVKLFG 562
+G G +G V R+ VAVK L R Q H R + EL +L + H N++ L
Sbjct: 23 VGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTY-RELRLLKHMKHENVIGLLD 81
Query: 563 V-----CIEDNNRCLVYELIHNGSLESHLHGDDKVN----GPLDWDARMKIALGAARGLA 613
V IE+ N VY L ++L G D N L + + RGL
Sbjct: 82 VFTPATSIENFNE--VY-------LVTNLMGADLNNIVKCQKLSDEHVQFLIYQLLRGLK 132
Query: 614 YLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAP 673
Y+H S +IHRD K SN+ + D ++ DFGLAR A DE +++T Y AP
Sbjct: 133 YIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDEMTGYVATR-----WYRAP 184
Query: 674 EYAMTG-HLLVKSDVYSYGVVLLELLTGR 701
E + H D++S G ++ ELL G+
Sbjct: 185 EIMLNWMHYNQTVDIWSVGCIMAELLKGK 213
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 69.8 bits (170), Expect = 8e-13
Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 11/198 (5%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCI 565
IG+G G VY I + G+EVA+K + Q + E+ ++ + N+V +
Sbjct: 27 IGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 86
Query: 566 EDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIH 625
+ +V E + GSL D +D + + L +LH S +VIH
Sbjct: 87 VGDELWVVMEYLAGGSLT-----DVVTETCMDEGQIAAVCRECLQALDFLH---SNQVIH 138
Query: 626 RDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKS 685
RD KS NILL D + K++DFG E +K + ++GT ++APE K
Sbjct: 139 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--STMVGTPYWMAPEVVTRKAYGPKV 196
Query: 686 DVYSYGVVLLELLTGRKP 703
D++S G++ +E++ G P
Sbjct: 197 DIWSLGIMAIEMVEGEPP 214
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Score = 70.2 bits (172), Expect = 9e-13
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 33/218 (15%)
Query: 505 RIIGEGGFGVVYRGILDD-GREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGV 563
R +G G G+V+ + D + VAVK + + + L E++++ RL H N+VK++ V
Sbjct: 11 RPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEV 70
Query: 564 CIEDNNR--------------CLVYELIHNGSLESHLHGDDKV--NGPLDWDARMKIALG 607
+ +V E +E+ L V GPL +
Sbjct: 71 LGPSGSDLTEDVGSLTELNSVYIVQEY-----METDLA---NVLEQGPLSEEHARLFMYQ 122
Query: 608 AARGLAYLHEDSSPRVIHRDFKSSNILL-EHDFTPKVSDFGLARTALDEGNKHISTHVMG 666
RGL Y+H S V+HRD K +N+ + D K+ DFGLAR +D H G
Sbjct: 123 LLRGLKYIH---SANVLHRDLKPANVFINTEDLVLKIGDFGLARI-VDPHYSHKGYLSEG 178
Query: 667 --TFGYLAPEYAMTGHLLVKS-DVYSYGVVLLELLTGR 701
T Y +P ++ + K+ D+++ G + E+LTG+
Sbjct: 179 LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 216
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342 |
| >gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Score = 69.6 bits (170), Expect = 1e-12
Identities = 70/226 (30%), Positives = 104/226 (46%), Gaps = 18/226 (7%)
Query: 491 LNDIEKATNGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEML 549
L + T+ + IG+G +G VY+ DG AVK+L + E AE +L
Sbjct: 14 LESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVD-EEIEAEYNIL 72
Query: 550 SRL-HHRNLVKLFGVCIEDNNRC-----LVYELIHNGSLESHLHGDDKVNGPLDWDARMK 603
L +H N+VK +G+ + + LV EL + GS+ + G LD
Sbjct: 73 QSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISY 132
Query: 604 IALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTH 663
I GA GL +LH + R+IHRD K +NILL + K+ DFG++ L +T
Sbjct: 133 ILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGVKLVDFGVS-AQLTSTRLRRNTS 188
Query: 664 VMGTFGYLAPEYAMTGHLL-----VKSDVYSYGVVLLELLTGRKPV 704
V GT ++APE + DV+S G+ +EL G P+
Sbjct: 189 V-GTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPL 233
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291 |
| >gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Score = 70.1 bits (172), Expect = 1e-12
Identities = 68/210 (32%), Positives = 105/210 (50%), Gaps = 30/210 (14%)
Query: 505 RIIGEGGFGVV---YRGILDDGREVAVKVLKRANQ---HGGREFLAELEMLSRLHHRNLV 558
+ IG G G+V Y + G+ VA+K L R Q H R + EL ++ ++H+N++
Sbjct: 22 KPIGSGAQGIVCAAYDTVT--GQNVAIKKLSRPFQNVTHAKRAY-RELVLMKLVNHKNII 78
Query: 559 KLFGV-----CIED-NNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAAR-G 611
L V +E+ + LV EL+ + +L + D LD + RM L G
Sbjct: 79 GLLNVFTPQKSLEEFQDVYLVMELM-DANLCQVIQMD------LDHE-RMSYLLYQMLCG 130
Query: 612 LAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYL 671
+ +LH S +IHRD K SNI+++ D T K+ DFGLARTA G + T + T Y
Sbjct: 131 IKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYR 184
Query: 672 APEYAMTGHLLVKSDVYSYGVVLLELLTGR 701
APE + D++S G ++ E++ G
Sbjct: 185 APEVILGMGYKENVDIWSVGCIMGEMIRGT 214
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353 |
| >gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Score = 68.8 bits (168), Expect = 1e-12
Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 12/201 (5%)
Query: 507 IGEGGFG-VVYRGILDDGREVAVKVL--KRANQHGGREF-LAELEMLSRLHHRNLVKLFG 562
+G+GGFG V + + G+ A K L KR + G + L E E+L +++ +V L
Sbjct: 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAY 60
Query: 563 VCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPR 622
+ CLV L++ G L+ H++ + L+ + + + G+ +LH S
Sbjct: 61 AFESKTHLCLVMSLMNGGDLKYHIYNVGERG--LEMERVIHYSAQITCGILHLH---SMD 115
Query: 623 VIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLL 682
+++RD K N+LL+ ++SD GLA L +G T GT GY+APE
Sbjct: 116 IVYRDMKPENVLLDDQGNCRLSDLGLA-VELKDGKT--ITQRAGTNGYMAPEILKEEPYS 172
Query: 683 VKSDVYSYGVVLLELLTGRKP 703
D ++ G + E++ GR P
Sbjct: 173 YPVDWFAMGCSIYEMVAGRTP 193
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277 |
| >gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Score = 70.1 bits (171), Expect = 1e-12
Identities = 66/206 (32%), Positives = 101/206 (49%), Gaps = 24/206 (11%)
Query: 505 RIIGEGGFGVVYRGILDD--GREVAVKVLKR--ANQHGGREFLAELEMLSRLHHRNLVKL 560
+ IG G G+V D G VAVK L R NQ + EL +L ++H+N++ L
Sbjct: 27 KPIGSGAQGIVCAA-FDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISL 85
Query: 561 FGVCI------EDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAY 614
V E + LV EL+ + +L +H + LD + + G+ +
Sbjct: 86 LNVFTPQKSLEEFQDVYLVMELM-DANLCQVIHME------LDHERMSYLLYQMLCGIKH 138
Query: 615 LHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPE 674
LH S +IHRD K SNI+++ D T K+ DFGLARTA N ++ +V+ + Y APE
Sbjct: 139 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACT--NFMMTPYVVTRY-YRAPE 192
Query: 675 YAMTGHLLVKSDVYSYGVVLLELLTG 700
+ D++S G ++ EL+ G
Sbjct: 193 VILGMGYKENVDIWSVGCIMGELVKG 218
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359 |
| >gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Score = 68.9 bits (168), Expect = 1e-12
Identities = 69/239 (28%), Positives = 111/239 (46%), Gaps = 32/239 (13%)
Query: 485 TAKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGILD--DGREVAVKVLKRANQHGGREF 542
+ KT + ++ + IG+G +G V++ +L+ +G + AVK+L + E
Sbjct: 4 SGKTIIFDSFPDPSDTWEIIETIGKGTYGKVFK-VLNKKNGSKAAVKILDPIHDID-EEI 61
Query: 543 LAELEMLSRLH-HRNLVKLFGVCIEDNNRC-----LVYELIHNGSLESHLHGDDKVNGPL 596
AE +L L H N+VK +G+ + + + LV EL + GS+ D V G L
Sbjct: 62 EAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVT------DLVKGFL 115
Query: 597 DWDARMK------IALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR 650
RM+ I A GL +LH + + IHRD K +NILL + K+ DFG+
Sbjct: 116 KRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGGVKLVDFGV-- 170
Query: 651 TALDEGNKHISTHVMGTFGYLAPEYAMTGHLL-----VKSDVYSYGVVLLELLTGRKPV 704
+A + +GT ++APE L + DV+S G+ +EL G P+
Sbjct: 171 SAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPL 229
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 68.7 bits (168), Expect = 2e-12
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 23/216 (10%)
Query: 501 FHTSRIIGEGGFGVVY----RGILDDGREVAVKVLKRA----NQHGGREFLAELEMLSRL 552
F R++G G +G V+ G D G+ A+KVLK+A E ++L +
Sbjct: 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAV 61
Query: 553 HHRN-LVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGA-AR 610
LV L D L+ + ++ G L +HL+ + ++ +++ +
Sbjct: 62 RRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFT-----ESEVRVYIAEIVL 116
Query: 611 GLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGY 670
L +LH+ +I+RD K NILL+ + ++DFGL++ L E + + GT Y
Sbjct: 117 ALDHLHQLG---IIYRDIKLENILLDSEGHVVLTDFGLSKEFLAE-EEERAYSFCGTIEY 172
Query: 671 LAPEYAMT---GHLLVKSDVYSYGVVLLELLTGRKP 703
+APE GH D +S GV+ ELLTG P
Sbjct: 173 MAPEVIRGGSGGHDKA-VDWWSLGVLTFELLTGASP 207
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 68.1 bits (166), Expect = 2e-12
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 22/211 (10%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVL--KRANQHGGREFLA---ELEMLSRLHHRNLV 558
+++G G FG VY D GRE+AVK + +Q +E A E+++L L H +V
Sbjct: 8 KLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIV 67
Query: 559 KLFGVCIEDNNR---CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYL 615
+ +G C+ D + E + GS++ L K G L + + +G++YL
Sbjct: 68 QYYG-CLRDPEEKKLSIFVEYMPGGSIKDQL----KAYGALTENVTRRYTRQILQGVSYL 122
Query: 616 HEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR---TALDEGNKHISTHVMGTFGYLA 672
H S ++HRD K +NIL + K+ DFG ++ T G S V GT +++
Sbjct: 123 H---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKS--VTGTPYWMS 177
Query: 673 PEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
PE K+DV+S ++E+LT + P
Sbjct: 178 PEVISGEGYGRKADVWSVACTVVEMLTEKPP 208
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264 |
| >gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 68.2 bits (167), Expect = 2e-12
Identities = 74/308 (24%), Positives = 133/308 (43%), Gaps = 48/308 (15%)
Query: 481 TYTGTAKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGG- 539
+Y K +DI+K +TS +I E +Y+GI ++ +EV ++ K+ H G
Sbjct: 7 SYINDIKCIESDDIDK-----YTSVLIKENDQNSIYKGIFNN-KEVIIRTFKKF--HKGH 58
Query: 540 ----REFLAELEMLSRLHHRNLVKLFGVCIEDNNR----CLVYELIHNGSLESHLHGDDK 591
E++ L R+ N++K++G I+ + L+ E G L L DK
Sbjct: 59 KVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVL---DK 115
Query: 592 VNGPLDWDARMKIALGAARGLAYLHE-DSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR 650
L + ++ +A+ +GL L++ + P +++ S + L+ ++ K+ GL +
Sbjct: 116 -EKDLSFKTKLDMAIDCCKGLYNLYKYTNKP---YKNLTSVSFLVTENYKLKIICHGLEK 171
Query: 651 TALDEGNKHISTHVMGTFGYLAPEYAMT--GHLLVKSDVYSYGVVLLELLTGRKPVDLSQ 708
K+++ V Y + + +K D+YS GVVL E+ TG+ P
Sbjct: 172 ILSSPPFKNVNFMV-----YFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPF---- 222
Query: 709 PPGQENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMG 768
EN LTTKE II+ + D +++ I C + RP +
Sbjct: 223 ----EN--------LTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIK 270
Query: 769 EVVQALKL 776
E++ L L
Sbjct: 271 EILYNLSL 278
|
Length = 283 |
| >gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Score = 69.3 bits (169), Expect = 2e-12
Identities = 67/222 (30%), Positives = 101/222 (45%), Gaps = 32/222 (14%)
Query: 501 FHTSRIIGEGGFGVV---YRGILDDGREVAVKVLKR--ANQHGGREFLAELEMLSRLHHR 555
+ + IG G G+V Y +LD R VA+K L R NQ + EL ++ ++H+
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 76
Query: 556 NLVKLFGVCI------EDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAA 609
N++ L V E + LV EL+ + + LD + +
Sbjct: 77 NIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQV-------IQMELDHERMSYLLYQML 129
Query: 610 RGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFG 669
G+ +LH S +IHRD K SNI+++ D T K+ DFGLARTA G + T + T
Sbjct: 130 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRY 183
Query: 670 YLAPEYAMTGHLLVKSDVYSYGVVLLE------LLTGRKPVD 705
Y APE + D++S G ++ E L GR +D
Sbjct: 184 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 225
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355 |
| >gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Score = 68.2 bits (166), Expect = 2e-12
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 22/211 (10%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLK--RANQHGGREFLA---ELEMLSRLHHRNLV 558
+++G+G FG VY +D GRE+A K ++ + +E A E+++L L H +V
Sbjct: 8 KLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIV 67
Query: 559 KLFGVCIEDNNR---CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYL 615
+ +G C+ D + E + GS++ L K G L K G++YL
Sbjct: 68 QYYG-CLRDRAEKTLTIFMEYMPGGSVKDQL----KAYGALTESVTRKYTRQILEGMSYL 122
Query: 616 HEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR---TALDEGNKHISTHVMGTFGYLA 672
H S ++HRD K +NIL + K+ DFG ++ T G S V GT +++
Sbjct: 123 H---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRS--VTGTPYWMS 177
Query: 673 PEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
PE K+DV+S G ++E+LT + P
Sbjct: 178 PEVISGEGYGRKADVWSLGCTVVEMLTEKPP 208
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266 |
| >gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 69.1 bits (169), Expect = 3e-12
Identities = 40/127 (31%), Positives = 68/127 (53%), Gaps = 4/127 (3%)
Query: 578 HNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEH 637
+ S +S D + + PLD D ++ + A+G+ +L +S IHRD + N+LL
Sbjct: 191 SSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFL---ASKNCIHRDVAARNVLLTD 247
Query: 638 DFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLEL 697
K+ DFGLAR +++ N + + ++APE V+SDV+SYG++L E+
Sbjct: 248 GRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 307
Query: 698 LT-GRKP 703
+ G+ P
Sbjct: 308 FSLGKSP 314
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374 |
| >gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Score = 67.7 bits (165), Expect = 3e-12
Identities = 66/210 (31%), Positives = 96/210 (45%), Gaps = 16/210 (7%)
Query: 507 IGEGGFGVVYRGILDDG---REVAVKVLK-RANQHGGREFLAELEMLSRLHHRNLVKLFG 562
IG G FG V G ++ G +V VK L+ A+ +FL E + L H NL++ G
Sbjct: 3 IGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLG 62
Query: 563 VCIEDNNRCLVYELIHNGSLESHLHGDDKV-NGPLDWDARMKIALGAARGLAYLHEDSSP 621
C E LV E G L+ +L K D ++A A GL +LH+++
Sbjct: 63 QCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN-- 120
Query: 622 RVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYA--MTG 679
IH D N LL D T K+ D+GL+ E + ++APE + G
Sbjct: 121 -FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHG 179
Query: 680 HLLV-----KSDVYSYGVVLLELLT-GRKP 703
+LLV +S+V+S GV + EL G +P
Sbjct: 180 NLLVVDQTKESNVWSLGVTIWELFELGSQP 209
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269 |
| >gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 68.3 bits (167), Expect = 3e-12
Identities = 66/212 (31%), Positives = 104/212 (49%), Gaps = 27/212 (12%)
Query: 505 RIIGEGGFGVVYRGIL----DDGREVAVKVLKRA----NQHGGREFLAELEMLSRLHHRN 556
+++G+GG+G V++ D G+ A+KVLK+A NQ AE +L + H
Sbjct: 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPF 61
Query: 557 LVKLFGVCIEDNNRCLVYELIHNGSLESHL--HGDDKVNGPLDWDARMKIALGAARGLAY 614
+V L L+ E + G L HL G + + + + +AL +
Sbjct: 62 IVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALE------H 115
Query: 615 LHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVM-GTFGYLAP 673
LH+ +I+RD K NILL+ K++DFGL + ++ EG TH GT Y+AP
Sbjct: 116 LHQQG---IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTV---THTFCGTIEYMAP 169
Query: 674 EYAM-TGHLLVKS-DVYSYGVVLLELLTGRKP 703
E M +GH K+ D +S G ++ ++LTG P
Sbjct: 170 EILMRSGH--GKAVDWWSLGALMYDMLTGAPP 199
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323 |
| >gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 67.6 bits (165), Expect = 4e-12
Identities = 54/207 (26%), Positives = 101/207 (48%), Gaps = 19/207 (9%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLK-RANQHGGREFLAELEMLSRLHHRNLVKLFGVC 564
+G+G +G VY+ + G +A+K ++ ++ + + EL++L + +V +G
Sbjct: 9 LGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAF 68
Query: 565 IEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVI 624
+ + E + GSL+ L+ + D +I +GL +L E+ + +I
Sbjct: 69 FIEGAVYMCMEYMDAGSLDK-LYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN--II 125
Query: 625 HRDFKSSNILLEHDFTPKVSDFGLARTALDEGN--KHISTHVMGTFGYLAPEYAMTGHLL 682
HRD K +N+L+ + K+ DFG++ GN ++ +G Y+APE +G
Sbjct: 126 HRDVKPTNVLVNGNGQVKLCDFGVS------GNLVASLAKTNIGCQSYMAPERIKSGGPN 179
Query: 683 ------VKSDVYSYGVVLLELLTGRKP 703
V+SDV+S G+ +LE+ GR P
Sbjct: 180 QNPTYTVQSDVWSLGLSILEMALGRYP 206
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286 |
| >gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Score = 67.4 bits (165), Expect = 5e-12
Identities = 66/228 (28%), Positives = 102/228 (44%), Gaps = 52/228 (22%)
Query: 506 IIGEGGFGVVY--RGILDDGREVAVKVLKRANQHGGREFLA--ELEMLSRLHHRNLVKLF 561
IG+G FG V+ R + VA+K + N+ G A E+++L L H N+V L
Sbjct: 19 KIGQGTFGEVFKARHKKT-KQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 77
Query: 562 GVC---IEDNNRC-----LVYE--------LIHNGSLESHLHGDDKVNGPLDWDARMKIA 605
+C NR LV+E L+ N +++ L KV MK+
Sbjct: 78 EICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKV---------MKML 128
Query: 606 LGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLART--ALDEGNKHISTH 663
L GL Y+H +++HRD K++NIL+ D K++DFGLAR + T+
Sbjct: 129 LN---GLYYIH---RNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTN 182
Query: 664 VMGTFGYLAPEYAMTGHLLV-------KSDVYSYGVVLLELLTGRKPV 704
+ T Y PE LL+ D++ G ++ E+ T R P+
Sbjct: 183 RVVTLWYRPPE------LLLGERDYGPPIDMWGAGCIMAEMWT-RSPI 223
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310 |
| >gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Score = 68.5 bits (167), Expect = 5e-12
Identities = 66/225 (29%), Positives = 110/225 (48%), Gaps = 31/225 (13%)
Query: 492 NDIEKATN-GFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEML 549
NDI ++ N + IIG G FGVVY I +D +VA+K + + Q+ RE L ++
Sbjct: 58 NDINRSPNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNRELL----IM 113
Query: 550 SRLHHRNLVKL----FGVCIEDNNRCL----VYELIHNGSLESHLHGDDKVNGPLDWDAR 601
L+H N++ L + C + N + + V E I ++ ++ + N L
Sbjct: 114 KNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLV 172
Query: 602 MKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLE-HDFTPKVSDFGLARTALDEGNKHI 660
+ R LAY+H S + HRD K N+L++ + T K+ DFG A+ L G + +
Sbjct: 173 KLYSYQLCRALAYIH---SKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLL-AGQRSV 228
Query: 661 STHVMGTFGYLAPEYAM-----TGHLLVKSDVYSYGVVLLELLTG 700
S ++ F Y APE + T H+ D++S G ++ E++ G
Sbjct: 229 S-YICSRF-YRAPELMLGATNYTTHI----DLWSLGCIIAEMILG 267
|
Length = 440 |
| >gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Score = 66.9 bits (163), Expect = 5e-12
Identities = 71/212 (33%), Positives = 98/212 (46%), Gaps = 31/212 (14%)
Query: 506 IIGEGGFGVVY--RGILDDGREVAVKVL--KRANQHGGREF-LAELEMLSRLHHRNLVKL 560
IIG GGFG VY R D G+ A+K L KR G L E MLS + +
Sbjct: 1 IIGRGGFGEVYGCRKA-DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCP-- 57
Query: 561 FGVCIE-----DNNRCLVYELIHNGSLESHL--HGDDKVNGPLDWDARMKI-ALGAARGL 612
F VC+ + + +L++ G L HL HG + +A M+ A GL
Sbjct: 58 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG-------VFSEAEMRFYAAEIILGL 110
Query: 613 AYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLA 672
++H V++RD K +NILL+ ++SD GLA + H S +GT GY+A
Sbjct: 111 EHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGTHGYMA 163
Query: 673 PEYAMTGHLLVKS-DVYSYGVVLLELLTGRKP 703
PE G S D +S G +L +LL G P
Sbjct: 164 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 195
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278 |
| >gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Score = 66.6 bits (162), Expect = 7e-12
Identities = 68/234 (29%), Positives = 102/234 (43%), Gaps = 33/234 (14%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCI 565
+G G +G VY+ L G AVK++K E+ M+ H N+V FG +
Sbjct: 17 VGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYL 76
Query: 566 EDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIAL---GAARGLAYLHEDSSPR 622
+ E GSL+ H V GPL + ++IA +GLAYLH
Sbjct: 77 SREKLWICMEYCGGGSLQDIYH----VTGPL---SELQIAYVCRETLQGLAYLHSKGK-- 127
Query: 623 VIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAM---TG 679
+HRD K +NILL + K++DFG+A K S +GT ++APE A G
Sbjct: 128 -MHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKS--FIGTPYWMAPEVAAVEKNG 184
Query: 680 HLLVKSDVYSYGVVLLELLTGRKPV-DLS-------------QPPGQENLVAWA 719
D+++ G+ +EL + P+ DL QPP ++ W+
Sbjct: 185 GYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWS 238
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267 |
| >gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Score = 67.8 bits (165), Expect = 7e-12
Identities = 66/231 (28%), Positives = 106/231 (45%), Gaps = 31/231 (13%)
Query: 501 FHTSRIIGEGGFGVV---YRGILDDGREVAVKVLKR--ANQHGGREFLAELEMLSRLHHR 555
+ + IG G G+V Y IL+ R VA+K L R NQ + EL ++ ++H+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 556 NLVKLFGVCI------EDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAA 609
N++ L V E + +V EL+ + + LD + +
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQV-------IQMELDHERMSYLLYQML 136
Query: 610 RGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFG 669
G+ +LH S +IHRD K SNI+++ D T K+ DFGLARTA G + T + T
Sbjct: 137 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRY 190
Query: 670 YLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWAR 720
Y APE + D++S G ++ E++ G PG +++ W +
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF-----PGTDHIDQWNK 236
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364 |
| >gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 67.7 bits (166), Expect = 7e-12
Identities = 67/239 (28%), Positives = 103/239 (43%), Gaps = 44/239 (18%)
Query: 499 NGFHTSRIIGEGGFGVVY--RGILDDGREVAVKVLKRA---NQHGGREFLAELEMLSRLH 553
+ F ++IG G FG V+ R D G+ A+KVL+++ ++ AE ++L+
Sbjct: 1 DDFEVIKVIGRGAFGEVWLVRDK-DTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADAD 59
Query: 554 HRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIA-LGAARGL 612
+VKL+ ++ + LV E + G L + L D P + AR IA L A L
Sbjct: 60 SPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDVF--PEET-ARFYIAELVLA--L 114
Query: 613 AYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLA----------------------- 649
+H IHRD K NIL++ D K++DFGL
Sbjct: 115 DSVH---KLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRD 171
Query: 650 -----RTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
R + ++ V GT Y+APE ++ D +S GV+L E+L G P
Sbjct: 172 NVLVRRRDHKQRRVRANSTV-GTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPP 229
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350 |
| >gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Score = 66.6 bits (162), Expect = 7e-12
Identities = 65/237 (27%), Positives = 103/237 (43%), Gaps = 27/237 (11%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVK 559
F + IG G +G VY+ ++ G A+KV+K E+ M+ H N+V
Sbjct: 11 FELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVA 70
Query: 560 LFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDS 619
FG + + + E GSL+ H V GPL ++ +GL YLH
Sbjct: 71 YFGSYLRRDKLWICMEFCGGGSLQDIYH----VTGPLSESQIAYVSRETLQGLYYLHSKG 126
Query: 620 SPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMT- 678
+HRD K +NILL + K++DFG++ K S +GT ++APE A
Sbjct: 127 K---MHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKS--FIGTPYWMAPEVAAVE 181
Query: 679 --GHLLVKSDVYSYGVVLLELLTGRKPV-DLS-------------QPPGQENLVAWA 719
G D+++ G+ +EL + P+ DL QPP ++ + W+
Sbjct: 182 RKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWS 238
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267 |
| >gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Score = 67.5 bits (165), Expect = 8e-12
Identities = 70/253 (27%), Positives = 117/253 (46%), Gaps = 39/253 (15%)
Query: 469 SSSSVSIDSCAVTYTGTAKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGI-LDDGREVA 527
SSSS S S + + + + +L+++E+ IG G G VY+ I GR A
Sbjct: 51 SSSSSSSSSSSASGSAPSAAKSLSELERV-------NRIGSGAGGTVYKVIHRPTGRLYA 103
Query: 528 VKVLKRANQHGGREFLA-ELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHL 586
+KV+ ++ R + E+E+L ++H N+VK + + ++ E + GSLE
Sbjct: 104 LKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTH 163
Query: 587 HGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDF 646
D++ +A G+AYLH ++HRD K SN+L+ K++DF
Sbjct: 164 IADEQ--------FLADVARQILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADF 212
Query: 647 GLART---ALDEGNKHISTHVMGTFGYLAPEYAMT--------GHLLVKSDVYSYGVVLL 695
G++R +D N + GT Y++PE T G+ D++S GV +L
Sbjct: 213 GVSRILAQTMDPCNSSV-----GTIAYMSPERINTDLNHGAYDGY---AGDIWSLGVSIL 264
Query: 696 ELLTGRKPVDLSQ 708
E GR P + +
Sbjct: 265 EFYLGRFPFGVGR 277
|
Length = 353 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 66.7 bits (162), Expect = 9e-12
Identities = 63/228 (27%), Positives = 103/228 (45%), Gaps = 12/228 (5%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCI 565
IG+G G V+ I + G+EVA+K + Q + E+ ++ L + N+V +
Sbjct: 27 IGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFL 86
Query: 566 EDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIH 625
+ +V E + GSL D +D + + L +LH + +VIH
Sbjct: 87 VGDELFVVMEYLAGGSLT-----DVVTETCMDEAQIAAVCRECLQALEFLHAN---QVIH 138
Query: 626 RDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKS 685
RD KS N+LL D + K++DFG E +K + ++GT ++APE K
Sbjct: 139 RDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKR--STMVGTPYWMAPEVVTRKAYGPKV 196
Query: 686 DVYSYGVVLLELLTGRKPVDLSQPPGQENLVAW-ARPLLTTKEGLKTI 732
D++S G++ +E++ G P P L+A P L E L I
Sbjct: 197 DIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPI 244
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Score = 66.2 bits (161), Expect = 1e-11
Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 11/198 (5%)
Query: 507 IGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCI 565
IGEG G+V GR+VAVK++ Q E+ ++ H+N+V+++ +
Sbjct: 29 IGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYL 88
Query: 566 EDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIH 625
++ E + G+L D L+ + + + L YLH S VIH
Sbjct: 89 VGEELWVLMEFLQGGALT-----DIVSQTRLNEEQIATVCESVLQALCYLH---SQGVIH 140
Query: 626 RDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKS 685
RD KS +ILL D K+SDFG + K S ++GT ++APE +
Sbjct: 141 RDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKS--LVGTPYWMAPEVISRTPYGTEV 198
Query: 686 DVYSYGVVLLELLTGRKP 703
D++S G++++E++ G P
Sbjct: 199 DIWSLGIMVIEMVDGEPP 216
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297 |
| >gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 65.6 bits (160), Expect = 1e-11
Identities = 66/231 (28%), Positives = 106/231 (45%), Gaps = 39/231 (16%)
Query: 507 IGEGGFGVVYRGIL-----DDGR------EVAVKVLKRANQHGGREFLAELEMLSRLHHR 555
+G+G F +Y+G+L D V +KVL + F ++S+L H+
Sbjct: 3 LGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGS-DHRDSLAFFETASLMSQLSHK 61
Query: 556 NLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYL 615
+LVKL+GVC+ D N +V E + G L+ LH +K N L W ++ +A A L YL
Sbjct: 62 HLVKLYGVCVRDENI-MVEEYVKFGPLDVFLH-REKNNVSLHW--KLDVAKQLASALHYL 117
Query: 616 HEDSSPRVIHRDFKSSNILL-----EHDFTP--KVSDFGLARTAL--DEGNKHISTHVMG 666
+ +++H + NIL+ + P K+SD G+ T L +E + I
Sbjct: 118 EDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSREERVERIP----- 169
Query: 667 TFGYLAPEYAMTGH--LLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENL 715
++APE G L + +D +S+G LLE+ + LS E
Sbjct: 170 ---WIAPECIRNGQASLTIAADKWSFGTTLLEICS-NGEEPLSTLSSSEKE 216
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259 |
| >gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 65.9 bits (160), Expect = 2e-11
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 14/198 (7%)
Query: 507 IGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLA--ELEMLSRLHHRNLVKLFGV 563
+GEG + VY+G +G+ VA+KV+ R + G F A E +L L H N+V L +
Sbjct: 13 LGEGSYATVYKGKSKVNGKLVALKVI-RLQEEEGTPFTAIREASLLKGLKHANIVLLHDI 71
Query: 564 CIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRV 623
LV+E +H + DK G L + RGL+Y+H+ +
Sbjct: 72 IHTKETLTLVFEYVHTDLCQYM----DKHPGGLHPENVKLFLFQLLRGLSYIHQRY---I 124
Query: 624 IHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAM-TGHLL 682
+HRD K N+L+ K++DFGLAR H ++ + T Y P+ + +
Sbjct: 125 LHRDLKPQNLLISDTGELKLADFGLARA--KSVPSHTYSNEVVTLWYRPPDVLLGSTEYS 182
Query: 683 VKSDVYSYGVVLLELLTG 700
D++ G + +E++ G
Sbjct: 183 TCLDMWGVGCIFVEMIQG 200
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303 |
| >gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Score = 65.9 bits (161), Expect = 2e-11
Identities = 66/215 (30%), Positives = 97/215 (45%), Gaps = 37/215 (17%)
Query: 506 IIGEGGFGVV----YRGILDDGREVAVKVLKRANQHGGRE---FLAE---LEMLSRLHHR 555
++G G FG V Y+ G A+K LK+ + E + E E + H
Sbjct: 6 VLGRGHFGKVLLAEYKK---TGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHP 62
Query: 556 NLVKLFGVCIEDNNR-CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKI-ALGAARGLA 613
LV LF C + + C V E G L H+H D + P R A GL
Sbjct: 63 FLVNLFA-CFQTEDHVCFVMEYAAGGDLMMHIH-TDVFSEP-----RAVFYAACVVLGLQ 115
Query: 614 YLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAP 673
YLHE+ ++++RD K N+LL+ + K++DFGL + + G++ ST GT +LAP
Sbjct: 116 YLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDR-TSTFC-GTPEFLAP 170
Query: 674 EYAMTGHLLVKS-----DVYSYGVVLLELLTGRKP 703
E L S D + GV++ E+L G P
Sbjct: 171 EV-----LTETSYTRAVDWWGLGVLIYEMLVGESP 200
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324 |
| >gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 65.3 bits (159), Expect = 2e-11
Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 14/203 (6%)
Query: 507 IGEGGFGVVYRGILDDGREVA---VKVLK-RANQHGGREFLAELEMLSRLHHRNLVKLFG 562
IG G FG V + VA VK LK A+ EFL + + L H N+++ G
Sbjct: 3 IGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLG 62
Query: 563 VCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPR 622
C+E LV+E G L+S+L + ++A A G+ ++H+ +
Sbjct: 63 QCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN--- 119
Query: 623 VIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEY--AMTGH 680
+H D N L D T KV D+G+ + E +LAPE G
Sbjct: 120 FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGG 179
Query: 681 LLVK-----SDVYSYGVVLLELL 698
L+ S+V++ GV L EL
Sbjct: 180 LITAEQTKPSNVWALGVTLWELF 202
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268 |
| >gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Score = 66.0 bits (161), Expect = 2e-11
Identities = 62/208 (29%), Positives = 91/208 (43%), Gaps = 23/208 (11%)
Query: 505 RIIGEGGFGVVYRGIL----DDGREVAVKVLKRANQHGGREF---LAELEMLSRLHHRNL 557
+++G+G FG V IL G+ A+K+LK+ E L E +L H L
Sbjct: 1 KLLGKGTFGKV---ILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFL 57
Query: 558 VKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLD--WDARMKIALGAARGLAYL 615
L + C V E + G L HL + + + A + ALG YL
Sbjct: 58 TALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALG------YL 111
Query: 616 HEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEY 675
H S V++RD K N++L+ D K++DFGL + + +G GT YLAPE
Sbjct: 112 H---SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTFCGTPEYLAPEV 166
Query: 676 AMTGHLLVKSDVYSYGVVLLELLTGRKP 703
D + GVV+ E++ GR P
Sbjct: 167 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 194
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323 |
| >gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 65.5 bits (160), Expect = 2e-11
Identities = 60/207 (28%), Positives = 89/207 (42%), Gaps = 30/207 (14%)
Query: 507 IGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLA--ELEMLSRLHHRNLVKLFGV 563
+GEG + VY+G G+ VA+K + R G F A E +L L H N+V L +
Sbjct: 13 LGEGSYATVYKGRSKLTGQLVALKEI-RLEHEEGAPFTAIREASLLKDLKHANIVTLHDI 71
Query: 564 CIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRV 623
LV+E + L+ ++ D G L RGLAY H+ RV
Sbjct: 72 IHTKKTLTLVFEYLDT-DLKQYM---DDCGGGLSMHNVRLFLFQLLRGLAYCHQR---RV 124
Query: 624 IHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMG----TFGYLAPEYAM-- 677
+HRD K N+L+ K++DFGLAR K + + T Y P+ +
Sbjct: 125 LHRDLKPQNLLISERGELKLADFGLARA------KSVPSKTYSNEVVTLWYRPPDVLLGS 178
Query: 678 ---TGHLLVKSDVYSYGVVLLELLTGR 701
+ L D++ G + E+ TGR
Sbjct: 179 TEYSTSL----DMWGVGCIFYEMATGR 201
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291 |
| >gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Score = 65.0 bits (158), Expect = 2e-11
Identities = 70/211 (33%), Positives = 97/211 (45%), Gaps = 29/211 (13%)
Query: 506 IIGEGGFGVVYR-GILDDGREVAVKVL--KRANQHGGREF-LAELEMLSRLHHRNLVKLF 561
IIG GGFG VY D G+ A+K L KR G L E MLS + + F
Sbjct: 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCP--F 58
Query: 562 GVCIE-----DNNRCLVYELIHNGSLESHL--HGDDKVNGPLDWDARMKI-ALGAARGLA 613
VC+ + C + +L++ G L HL HG + + M+ A GL
Sbjct: 59 IVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHG-------VFSEKEMRFYATEIILGLE 111
Query: 614 YLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAP 673
++H V++RD K +NILL+ ++SD GLA + H S +GT GY+AP
Sbjct: 112 HMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGTHGYMAP 164
Query: 674 EYAMTGHLLVKS-DVYSYGVVLLELLTGRKP 703
E G S D +S G +L +LL G P
Sbjct: 165 EVLQKGTAYDSSADWFSLGCMLFKLLRGHSP 195
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279 |
| >gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 66.1 bits (161), Expect = 2e-11
Identities = 46/175 (26%), Positives = 73/175 (41%), Gaps = 12/175 (6%)
Query: 543 LAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIH-NGSLESHLHGDDKVNGPLDWDAR 601
L E +L ++H +++++ + C+V L H + L ++L PL D
Sbjct: 105 LIEAMLLQNVNHPSVIRMKDTLVSGAITCMV--LPHYSSDLYTYLTKRS---RPLPIDQA 159
Query: 602 MKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIS 661
+ I GL YLH R+IHRD K+ NI + + D G A+ +
Sbjct: 160 LIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFL-- 214
Query: 662 THVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLV 716
+ GT APE K+D++S G+VL E+L + P E V
Sbjct: 215 -GLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYV 268
|
Length = 357 |
| >gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 65.6 bits (160), Expect = 2e-11
Identities = 59/225 (26%), Positives = 101/225 (44%), Gaps = 40/225 (17%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGRE--------------FLAELEMLSR 551
+GEG +G V + G+ VA+K +K L EL++++
Sbjct: 17 LGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNE 76
Query: 552 LHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMK-IALGAAR 610
+ H N++ L V +E + LV +++ L+ + D K+ ++++K I L
Sbjct: 77 IKHENIMGLVDVYVEGDFINLVMDIMA-SDLKKVV--DRKI---RLTESQVKCILLQILN 130
Query: 611 GLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR----------TALDEGNK-- 658
GL LH+ +HRD +NI + K++DFGLAR + DE +
Sbjct: 131 GLNVLHKWY---FMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRR 187
Query: 659 -HISTHVMGTFGYLAPEYAMTGHLLVKS-DVYSYGVVLLELLTGR 701
+++ V+ T Y APE M + D++S G + ELLTG+
Sbjct: 188 EEMTSKVV-TLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGK 231
|
Length = 335 |
| >gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 65.0 bits (158), Expect = 4e-11
Identities = 61/208 (29%), Positives = 92/208 (44%), Gaps = 30/208 (14%)
Query: 507 IGEGGFGVVYRGILDDGR---EVAVKVLKRANQHGGREFLA-----ELEMLSRLHHRNLV 558
+G G +G V + D R +VA+K L R Q E A EL +L + H N++
Sbjct: 23 VGSGAYGTVCSAL--DRRTGAKVAIKKLYRPFQ---SELFAKRAYRELRLLKHMKHENVI 77
Query: 559 KLFGVCIEDNNRCLVYELIHNGSLESHLHGDD--KV--NGPLDWDARMKIALGAARGLAY 614
L V D + + H+ L G D K+ + L D + +GL Y
Sbjct: 78 GLLDVFTPDLS----LDRFHDFYLVMPFMGTDLGKLMKHEKLSEDRIQFLVYQMLKGLKY 133
Query: 615 LHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPE 674
+H + +IHRD K N+ + D K+ DFGLAR E ++ T Y APE
Sbjct: 134 IH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSEMTGYVVTR-----WYRAPE 185
Query: 675 YAMTG-HLLVKSDVYSYGVVLLELLTGR 701
+ H D++S G ++ E+LTG+
Sbjct: 186 VILNWMHYTQTVDIWSVGCIMAEMLTGK 213
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 65.0 bits (158), Expect = 4e-11
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 14/204 (6%)
Query: 505 RIIGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREF---LAELEMLS-RLHHRNLVK 559
+++G+G FG V+ L + A+K LK+ + + E +LS H L
Sbjct: 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 60
Query: 560 LFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDS 619
L+ N V E ++ G L H+ K + P +I G L +LH
Sbjct: 61 LYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICG----LQFLH--- 113
Query: 620 SPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTG 679
S +++RD K NILL+ D K++DFG+ + + G+ T GT Y+APE +
Sbjct: 114 SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENM-LGDAKTCTFC-GTPDYIAPEILLGQ 171
Query: 680 HLLVKSDVYSYGVVLLELLTGRKP 703
D +S+GV+L E+L G+ P
Sbjct: 172 KYNTSVDWWSFGVLLYEMLIGQSP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 64.9 bits (158), Expect = 5e-11
Identities = 62/205 (30%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLA-----ELEMLSRLHHRNLVKL 560
+G G +G V I G +VA+K L R Q E A EL +L + H N++ L
Sbjct: 23 VGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ---SEIFAKRAYRELTLLKHMQHENVIGL 79
Query: 561 FGVCIEDNNRCLVYELIHNGSLESHLHGDD--KVNG-PLDWDARMKIALGAARGLAYLHE 617
V + + + L D K+ G PL D + GL Y+H
Sbjct: 80 LDVFTS----AVSGDEFQDFYLVMPYMQTDLQKIMGHPLSEDKVQYLVYQMLCGLKYIH- 134
Query: 618 DSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAM 677
S +IHRD K N+ + D K+ DFGLAR A E ++ T Y APE +
Sbjct: 135 --SAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVIL 187
Query: 678 TG-HLLVKSDVYSYGVVLLELLTGR 701
H D++S G ++ E+LTG+
Sbjct: 188 NWMHYNQTVDIWSVGCIMAEMLTGK 212
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342 |
| >gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Score = 64.3 bits (156), Expect = 8e-11
Identities = 56/211 (26%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 505 RIIGEGGFGVVYRGILDDGREV-AVKVLKRANQHGGREF---LAELEMLSRLHHRNLVKL 560
R+IG G + V L ++ A+KV+K+ H + E + + +
Sbjct: 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVG 60
Query: 561 FGVCIEDNNRC-LVYELIHNGSLESHLHGDDKVNGPLD----WDARMKIALGAARGLAYL 615
C + +R LV E ++ G L H+ K+ P + + A + IAL +L
Sbjct: 61 LHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKL--PEEHARFYAAEICIALN------FL 112
Query: 616 HEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEY 675
HE +I+RD K N+LL+ D K++D+G+ + L G+ ++ GT Y+APE
Sbjct: 113 HERG---IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDT--TSTFCGTPNYIAPEI 167
Query: 676 AMTGHLLVKSDVYSYGVVLLELLTGRKPVDL 706
D ++ GV++ E++ GR P D+
Sbjct: 168 LRGEEYGFSVDWWALGVLMFEMMAGRSPFDI 198
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 63.6 bits (155), Expect = 9e-11
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 32/223 (14%)
Query: 501 FHTSRIIGEGGFGVVYRGILDDGRE-VAVKVLK-------RANQHGGREFLAELEMLSRL 552
+ +G G FG V+ A+KV+ + QH E +L +
Sbjct: 3 LERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQH----VHNEKRVLKEV 58
Query: 553 HHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGP--LDWDARMKIALGAAR 610
H +++LF + ++ E + G L S+L + + L + + + AL
Sbjct: 59 SHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCAL---- 114
Query: 611 GLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVM-GTFG 669
YLH S +++RD K NILL+ + K++DFG A+ D T + GT
Sbjct: 115 --EYLH---SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR------TWTLCGTPE 163
Query: 670 YLAPE-YAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPG 711
YLAPE GH D ++ G+++ E+L G P P G
Sbjct: 164 YLAPEVIQSKGHNKA-VDWWALGILIYEMLVGYPPFFDDNPFG 205
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Score = 63.1 bits (153), Expect = 9e-11
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 505 RIIGEGGFG--VVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFG 562
R++GEG FG ++ + + D + ++ + + E +L+++ H N+V
Sbjct: 6 RVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKE 65
Query: 563 VCIEDNNRCLVYELIHNGSL-------ESHLHGDDKVNGPLDWDARMKIALGAARGLAYL 615
D + +V E G L L +D + L W +M + G+ ++
Sbjct: 66 SFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTI---LQWFVQMCL------GVQHI 116
Query: 616 HEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEY 675
HE RV+HRD KS NI L + K+ DFG AR L + T+V GT Y+ PE
Sbjct: 117 HEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARL-LTSPGAYACTYV-GTPYYVPPEI 171
Query: 676 AMTGHLLVKSDVYSYGVVLLELLTGRKP 703
KSD++S G +L EL T + P
Sbjct: 172 WENMPYNNKSDIWSLGCILYELCTLKHP 199
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255 |
| >gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Score = 63.5 bits (154), Expect = 1e-10
Identities = 63/204 (30%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 505 RIIGEGGFGVVYRGILD-DGREVAVKVLKRA---NQHGGREFLAELE-MLSRLHHRNLVK 559
++IG+G FG V DG+ AVKVL++ N+ + +AE +L + H LV
Sbjct: 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVG 60
Query: 560 LFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDS 619
L V + ++ G L HL + P AR A A L YLH
Sbjct: 61 LHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEP---RARFYAA-EIASALGYLH--- 113
Query: 620 SPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTG 679
S +++RD K NILL+ ++DFGL + + + + +T GT YLAPE
Sbjct: 114 SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDT--TTTFCGTPEYLAPEVIRKQ 171
Query: 680 HLLVKSDVYSYGVVLLELLTGRKP 703
D + G VL E+L G P
Sbjct: 172 PYDNTVDWWCLGAVLYEMLYGLPP 195
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325 |
| >gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Score = 63.5 bits (154), Expect = 1e-10
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 501 FHTSRIIGEGGFGVVYRGILDDGREV-AVKVLKR--ANQHGGRE-FLAELEMLSRLHHRN 556
F+ ++G+G FG V E+ A+K+LK+ Q E + E +L+
Sbjct: 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPP 61
Query: 557 LVKLFGVCIEDNNRC-LVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYL 615
+ C + +R V E ++ G L H+ K P +I++G L +L
Sbjct: 62 FLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVG----LFFL 117
Query: 616 HEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVM-GTFGYLAPE 674
H +I+RD K N++L+ + K++DFG+ + + +G ++T GT Y+APE
Sbjct: 118 HRRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG---VTTRTFCGTPDYIAPE 171
Query: 675 YAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 705
D ++YGV+L E+L G+ P D
Sbjct: 172 IIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 202
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323 |
| >gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Score = 62.5 bits (152), Expect = 3e-10
Identities = 66/204 (32%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRA---NQHGGREFLAELE-MLSRLHHRNLVK 559
++IG+G FG V DG+ AVKVL++ + + +AE +L + H LV
Sbjct: 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVG 60
Query: 560 LFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDS 619
L + V + ++ G L HL + P AR A A L YLH
Sbjct: 61 LHYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEP---RARF-YAAEIASALGYLH--- 113
Query: 620 SPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTG 679
S +I+RD K NILL+ ++DFGL + + E +K ST GT YLAPE
Sbjct: 114 SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGI-EHSKTTSTFC-GTPEYLAPEVLRKQ 171
Query: 680 HLLVKSDVYSYGVVLLELLTGRKP 703
D + G VL E+L G P
Sbjct: 172 PYDRTVDWWCLGAVLYEMLYGLPP 195
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323 |
| >gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 63.5 bits (154), Expect = 3e-10
Identities = 70/266 (26%), Positives = 112/266 (42%), Gaps = 43/266 (16%)
Query: 544 AELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMK 603
+EL L+ H +VK F D+ L+ E G L + K + P +
Sbjct: 114 SELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQ---EYE 170
Query: 604 IALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTH 663
+ L + + L E S +++HRD KS+NI L K+ DFG ++ D + +++
Sbjct: 171 VGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASS 230
Query: 664 VMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLL 723
GT YLAPE K+D++S GV+L ELLT +P + P Q ++ + +L
Sbjct: 231 FCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPF---KGPSQREIM---QQVL 284
Query: 724 TTK---------EGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA- 773
K G+K ++DP++ N + RP +++
Sbjct: 285 YGKYDPFPCPVSSGMKALLDPLLSKN--------------------PALRPTTQQLLHTE 324
Query: 774 -LKLVCNEFDET---KETIESRDLSE 795
LK V N F + ETI D E
Sbjct: 325 FLKYVANLFQDIVRHSETISPHDREE 350
|
Length = 478 |
| >gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Score = 61.9 bits (151), Expect = 3e-10
Identities = 56/213 (26%), Positives = 86/213 (40%), Gaps = 45/213 (21%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKR-------ANQHGGREFLAELEMLSRL-HHRNL 557
IGEG F V + G+ A+K +K+ N L E++ L RL H N+
Sbjct: 7 IGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNN------LREIQALRRLSPHPNI 60
Query: 558 VKLFGVCIEDNNRCL----------VYELIHNGSLESHLHGDDKVNGPLDWDARMKIALG 607
++L V + L +YELI + +V
Sbjct: 61 LRLIEVLFDRKTGRLALVFELMDMNLYELIKG---RKRPLPEKRV---------KSYMYQ 108
Query: 608 AARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGT 667
+ L ++H + + HRD K NIL+ D K++DFG R K T + T
Sbjct: 109 LLKSLDHMHRNG---IFHRDIKPENILI-KDDILKLADFGSCRGIYS---KPPYTEYIST 161
Query: 668 FGYLAPEYAMT-GHLLVKSDVYSYGVVLLELLT 699
Y APE +T G+ K D+++ G V E+L+
Sbjct: 162 RWYRAPECLLTDGYYGPKMDIWAVGCVFFEILS 194
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282 |
| >gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 61.5 bits (149), Expect = 4e-10
Identities = 59/200 (29%), Positives = 91/200 (45%), Gaps = 16/200 (8%)
Query: 507 IGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLA--ELEMLSRLHHRNLVKLFGV 563
+GEG + VY+GI +G+ VA+KV+ G F A E +L L H N+V L +
Sbjct: 13 LGEGSYATVYKGISRINGQLVALKVIS-MKTEEGVPFTAIREASLLKGLKHANIVLLHDI 71
Query: 564 CIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRV 623
V+E +H L ++ + G L RGLAY+H +
Sbjct: 72 IHTKETLTFVFEYMHT-DLAQYM---IQHPGGLHPYNVRLFMFQLLRGLAYIHGQ---HI 124
Query: 624 IHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLV 683
+HRD K N+L+ + K++DFGLAR + S V T Y P+ + G
Sbjct: 125 LHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVV--TLWYRPPD-VLLGATDY 181
Query: 684 KS--DVYSYGVVLLELLTGR 701
S D++ G + +E+L G+
Sbjct: 182 SSALDIWGAGCIFIEMLQGQ 201
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291 |
| >gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Score = 61.7 bits (150), Expect = 4e-10
Identities = 70/259 (27%), Positives = 112/259 (43%), Gaps = 41/259 (15%)
Query: 499 NGFHTSRIIGEGGFGVVYRGILDDGRE-VAVKVLKRAN---QHGGREFLAELEMLSRLHH 554
F T ++I G +G VY + R+ A+K + + N ++ ++ E ++L+ +
Sbjct: 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAEN 60
Query: 555 RNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWD-ARMKIALGAARGLA 613
+V +F + C+V E + G + L K G L D ARM A L
Sbjct: 61 PFVVSMFCSFETKRHLCMVMEYVEGGDCATLL----KNIGALPVDMARMYFA-ETVLALE 115
Query: 614 YLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR-------TALDEGNKHIST---- 662
YLH + ++HRD K N+L+ K++DFGL++ T L EG+ T
Sbjct: 116 YLH---NYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFL 172
Query: 663 --HVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP---------------VD 705
V GT Y+APE + D ++ G++L E L G P D
Sbjct: 173 DKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDD 232
Query: 706 LSQPPGQENLVAWARPLLT 724
+ P G E L A A+ L++
Sbjct: 233 IEWPEGDEALPADAQDLIS 251
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305 |
| >gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 61.8 bits (150), Expect = 4e-10
Identities = 62/214 (28%), Positives = 94/214 (43%), Gaps = 42/214 (19%)
Query: 507 IGEGGFGVV----YRGILDDGREVAVKVLKRAN-------QHGGREFLAELEMLSRLHHR 555
+G G FG V ++G G A+K LK+ QH E +L L H
Sbjct: 26 LGTGSFGRVRIAKHKG---TGEYYAIKCLKKREILKMKQVQH----VAQEKSILMELSHP 78
Query: 556 NLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLD----WDARMKIALGAARG 611
+V + ++N + E + G L +HL + P D + A + +A
Sbjct: 79 FIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRF--PNDVAKFYHAELVLAF----- 131
Query: 612 LAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYL 671
YLH +I+RD K N+LL++ KV+DFG A+ D + + GT YL
Sbjct: 132 -EYLHSKD---IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR-----TFTLCGTPEYL 182
Query: 672 APEYAMT-GHLLVKS-DVYSYGVVLLELLTGRKP 703
APE + GH K+ D ++ GV+L E + G P
Sbjct: 183 APEVIQSKGH--GKAVDWWTMGVLLYEFIAGYPP 214
|
Length = 329 |
| >gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 62.6 bits (152), Expect = 5e-10
Identities = 63/220 (28%), Positives = 96/220 (43%), Gaps = 22/220 (10%)
Query: 501 FHTSRIIGEGGFG-VVYRGILDDGREVAVKV--LKRANQHGGREFLAELEMLSRLHHRNL 557
+ SR++G G G V+ + DG AVKV ++ ++ AE+ L ++
Sbjct: 34 YWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSI 93
Query: 558 VKLFGVCIED------NNR------CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIA 605
VK C ED N LV + + G L + K N +
Sbjct: 94 VK----CHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTF---REHEAG 146
Query: 606 LGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVM 665
L + L +H S +IHRD KS+NILL + K+ DFG ++ + +
Sbjct: 147 LLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFC 206
Query: 666 GTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 705
GT Y+APE K+D++S GV+L ELLT ++P D
Sbjct: 207 GTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFD 246
|
Length = 496 |
| >gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Score = 60.4 bits (146), Expect = 6e-10
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 31/209 (14%)
Query: 505 RIIGEGGFGVV----YRGILDDGREVAVKVL--KRANQHGGREFLAELEMLSRLHHRNLV 558
R++G+G +G V +R DG++ +K L + A++ + E ++LS+L H N+V
Sbjct: 6 RVVGKGSYGEVSLVRHR---TDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIV 62
Query: 559 KLF----GVCIEDNNRCLVYELIHNGSLESHLHGDD----KVNGPLDWDARMKIALGAAR 610
G ED +V G L L N ++W ++ +AL
Sbjct: 63 AYRESWEG---EDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMAL---- 115
Query: 611 GLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGY 670
YLHE ++HRD K+ N+ L KV D G+AR E +++ ++GT Y
Sbjct: 116 --QYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVL--ENQCDMASTLIGTPYY 168
Query: 671 LAPEYAMTGHLLVKSDVYSYGVVLLELLT 699
++PE KSDV++ G + E+ T
Sbjct: 169 MSPELFSNKPYNYKSDVWALGCCVYEMAT 197
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257 |
| >gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 61.1 bits (148), Expect = 6e-10
Identities = 65/203 (32%), Positives = 100/203 (49%), Gaps = 17/203 (8%)
Query: 507 IGEGGFGVVYRGILDDGREV-AVKVLKRANQHGGREF---LAELEMLSRLHHRNLVKLFG 562
IG+G FG V + D + + A+K +++A+ E LAE +L++++ +V L
Sbjct: 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKF 60
Query: 563 VCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIA-LGAARGLAYLHEDSSP 621
LV I+ G L HL + + + AR A L A L LH+ +
Sbjct: 61 SFQSPEKLYLVLAFINGGELFHHLQREGRFD---LSRARFYTAELLCA--LENLHKFN-- 113
Query: 622 RVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHL 681
VI+RD K NILL++ + DFGL + L+ + + GT YLAPE + GH
Sbjct: 114 -VIYRDLKPENILLDYQGHIALCDFGLCK--LNMKDDDKTNTFCGTPEYLAPEL-LLGHG 169
Query: 682 LVKS-DVYSYGVVLLELLTGRKP 703
K+ D ++ GV+L E+LTG P
Sbjct: 170 YTKAVDWWTLGVLLYEMLTGLPP 192
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312 |
| >gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Score = 61.0 bits (148), Expect = 7e-10
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 22/209 (10%)
Query: 506 IIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGG------REFLAELEMLSRLHHRNLV 558
IGEG +G VY+ + G+ VA+K + G RE ++ L+MLS + +V
Sbjct: 8 KIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALRE-ISLLQMLSESIY--IV 64
Query: 559 KLFGV--CIEDNNRCLVYELIH--NGSLESHLHGDDKVNG-PLDWDARMKIALGAARGLA 613
+L V E N + +Y + + L+ + + + G PL +G+A
Sbjct: 65 RLLDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVA 124
Query: 614 YLHEDSSPRVIHRDFKSSNILLEHDFTP-KVSDFGLARTALDEGNKHISTHVMGTFGYLA 672
+ H V+HRD K N+L++ K++D GL R + TH + T Y A
Sbjct: 125 HCH---KHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSY--THEIVTLWYRA 179
Query: 673 PEYAMTG-HLLVKSDVYSYGVVLLELLTG 700
PE + H D++S G + E+
Sbjct: 180 PEVLLGSTHYSTPVDIWSVGCIFAEMSRK 208
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295 |
| >gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Score = 60.8 bits (147), Expect = 8e-10
Identities = 61/221 (27%), Positives = 105/221 (47%), Gaps = 27/221 (12%)
Query: 505 RIIGEGGFG-VVYRGILDDGREVAVKVLKR--ANQHGGREFL-AELEMLSRL-HHRNLVK 559
R+IG G + V+ + R A+KV+K+ N +++ E + + +H LV
Sbjct: 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 60
Query: 560 LFGVCIEDNNRCL-VYELIHNGSLESHLHGDDKVNGPLD----WDARMKIALGAARGLAY 614
L C + +R V E ++ G L H+ K+ P + + A + +AL Y
Sbjct: 61 LHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKL--PEEHARFYSAEISLALN------Y 111
Query: 615 LHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPE 674
LHE +I+RD K N+LL+ + K++D+G+ + L G+ ++ GT Y+APE
Sbjct: 112 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSTFCGTPNYIAPE 166
Query: 675 YAMTGHLLVKSDVYSYGVVLLELLTGRKPVDL---SQPPGQ 712
D ++ GV++ E++ GR P D+ S P Q
Sbjct: 167 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 207
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329 |
| >gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Score = 60.4 bits (146), Expect = 1e-09
Identities = 64/227 (28%), Positives = 104/227 (45%), Gaps = 26/227 (11%)
Query: 501 FHTSRIIGEGGFGVVY--RGIL--DDGREVAVKVLKRAN--QHGGREFLAELEMLSRLHH 554
F +++G G +G V+ R + D G+ A+KVLK+A Q E H
Sbjct: 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 61
Query: 555 RN---LVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGA-AR 610
R LV L D L+ + I+ G L +HL ++ + ++I G
Sbjct: 62 RQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFK-----EQEVQIYSGEIVL 116
Query: 611 GLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGY 670
L +LH+ +I+RD K NILL+ + ++DFGL++ ++ + + GT Y
Sbjct: 117 ALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVER-AYSFCGTIEY 172
Query: 671 LAPEYAM---TGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQEN 714
+AP+ GH D +S GV++ ELLTG P + G++N
Sbjct: 173 MAPDIVRGGDGGHDKA-VDWWSMGVLMYELLTGASPFTVD---GEKN 215
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290 |
| >gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 60.6 bits (147), Expect = 1e-09
Identities = 64/260 (24%), Positives = 101/260 (38%), Gaps = 67/260 (25%)
Query: 505 RIIGEGGFGVVYR----GILDDG--REVAVKVLK---RANQHGGREFLAELEMLSRL-HH 554
+ +G G FG V + GI R VAVK+LK A+++ + + EL++L + HH
Sbjct: 13 KPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEY--KALMTELKILIHIGHH 70
Query: 555 RNLVKLFGVCIEDNNRCLV-YELIHNGSLESHLHGDDKVNGPL-DWDAR---MKIALGAA 609
N+V L G C + +V E G+L ++L + P + R MK G
Sbjct: 71 LNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKK 130
Query: 610 --------------------RGLAYLHEDSSP---------------------------- 621
+ L+ + ED
Sbjct: 131 QRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLA 190
Query: 622 --RVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTG 679
+ IHRD + NILL + K+ DFGLAR + + ++APE
Sbjct: 191 SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDK 250
Query: 680 HLLVKSDVYSYGVVLLELLT 699
+SDV+S+GV+L E+ +
Sbjct: 251 VYTTQSDVWSFGVLLWEIFS 270
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337 |
| >gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 60.4 bits (146), Expect = 1e-09
Identities = 60/200 (30%), Positives = 100/200 (50%), Gaps = 16/200 (8%)
Query: 507 IGEGGFGVVYRG--ILDDGREVAVKVLKRANQHGGR-EFLAELEMLSRLHHRNLVKLFGV 563
+GEG + V++G L + VA+K ++ ++ G + E+ +L L H N+V L +
Sbjct: 14 LGEGTYATVFKGRSKLTENL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 72
Query: 564 CIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIAL-GAARGLAYLHEDSSPR 622
D + LV+E + + L+ ++ DD G + +KI L RGLAY H +
Sbjct: 73 VHTDKSLTLVFEYL-DKDLKQYM--DD--CGNIMSMHNVKIFLYQILRGLAYCHRR---K 124
Query: 623 VIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAM-TGHL 681
V+HRD K N+L+ K++DFGLAR A K S V+ T Y P+ + +
Sbjct: 125 VLHRDLKPQNLLINERGELKLADFGLAR-AKSVPTKTYSNEVV-TLWYRPPDVLLGSSEY 182
Query: 682 LVKSDVYSYGVVLLELLTGR 701
+ D++ G + E+ +GR
Sbjct: 183 STQIDMWGVGCIFFEMASGR 202
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309 |
| >gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Score = 60.4 bits (146), Expect = 1e-09
Identities = 61/205 (29%), Positives = 91/205 (44%), Gaps = 16/205 (7%)
Query: 505 RIIGEGGFG-VVYRGILDDGREVAVKVLKRANQHGGREF---LAELEMLSRLHHRNLVKL 560
+++G+G FG V+ GR A+K+LK+ E L E +L H L L
Sbjct: 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 60
Query: 561 FGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGA--ARGLAYLHED 618
+ C V E + G L HL + + + R + GA L YLH
Sbjct: 61 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFS-----EDRARF-YGAEIVSALDYLH-- 112
Query: 619 SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMT 678
S V++RD K N++L+ D K++DFGL + + +G + GT YLAPE
Sbjct: 113 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPEYLAPEVLED 170
Query: 679 GHLLVKSDVYSYGVVLLELLTGRKP 703
D + GVV+ E++ GR P
Sbjct: 171 NDYGRAVDWWGLGVVMYEMMCGRLP 195
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325 |
| >gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 60.4 bits (146), Expect = 1e-09
Identities = 59/199 (29%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 507 IGEGGFGVVYRG--ILDDGREVAVKVLKRANQHGGR-EFLAELEMLSRLHHRNLVKLFGV 563
+GEG + VY+G L D VA+K ++ ++ G + E+ +L L H N+V L +
Sbjct: 14 LGEGTYATVYKGRSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 72
Query: 564 CIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRV 623
+ + LV+E + + L+ +L DD N + ++ + RGL Y H +V
Sbjct: 73 IHTEKSLTLVFEYL-DKDLKQYL--DDCGNSINMHNVKLFL-FQLLRGLNYCHRR---KV 125
Query: 624 IHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAM-TGHLL 682
+HRD K N+L+ K++DFGLAR A K S V+ T Y P+ + +
Sbjct: 126 LHRDLKPQNLLINERGELKLADFGLAR-AKSIPTKTYSNEVV-TLWYRPPDILLGSTDYS 183
Query: 683 VKSDVYSYGVVLLELLTGR 701
+ D++ G + E+ TGR
Sbjct: 184 TQIDMWGVGCIFYEMSTGR 202
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301 |
| >gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Score = 60.7 bits (147), Expect = 1e-09
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 596 LDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655
LD + + + A+G+++L +S IHRD + NILL H K+ DFGLAR ++
Sbjct: 211 LDTEDLLSFSYQVAKGMSFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIRND 267
Query: 656 GNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
N + + ++APE +SDV+SYG++L E+ + G P
Sbjct: 268 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSP 316
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375 |
| >gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Score = 61.7 bits (150), Expect = 1e-09
Identities = 62/231 (26%), Positives = 99/231 (42%), Gaps = 40/231 (17%)
Query: 505 RIIGEGGFGVVYRGILDD---GREVAVKVLKR---ANQHGGREFLAELEMLSRLHHRNLV 558
R+IG+GG G VY D R VA+K ++ N + FL E ++ + L H +V
Sbjct: 8 RLIGKGGMGEVYLAY--DPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIV 65
Query: 559 KLFGVCIEDNNRCLVY---ELIHNGSLESHLHG---DDKVNGPLDWD----ARMKIALGA 608
++ +C + + VY I +L+S L + ++ L A + I
Sbjct: 66 PVYSICSDGD---PVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKI 122
Query: 609 ARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLART---------ALDEGNKH 659
+ Y+H S V+HRD K NILL + D+G A +D ++
Sbjct: 123 CATIEYVH---SKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERN 179
Query: 660 ISTHVM-------GTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
I M GT Y+APE + +D+Y+ GV+L ++LT P
Sbjct: 180 ICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFP 230
|
Length = 932 |
| >gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Score = 60.1 bits (145), Expect = 2e-09
Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 13/203 (6%)
Query: 505 RIIGEGGFG-VVYRGILDDGREVAVKVLKRANQHGGREF---LAELEMLSRLHHRNLVKL 560
+++G+G FG V+ G+ A+K+LK+ E L E +L H L L
Sbjct: 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSL 60
Query: 561 FGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSS 620
+ C V E ++ G L HL ++V D L YLH S
Sbjct: 61 KYSFQTKDRLCFVMEYVNGGELFFHL-SRERV---FSEDRTRFYGAEIVSALDYLH---S 113
Query: 621 PRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGH 680
++++RD K N++L+ D K++DFGL + + + + GT YLAPE
Sbjct: 114 GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKT--FCGTPEYLAPEVLEDND 171
Query: 681 LLVKSDVYSYGVVLLELLTGRKP 703
D + GVV+ E++ GR P
Sbjct: 172 YGRAVDWWGLGVVMYEMMCGRLP 194
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328 |
| >gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Score = 59.3 bits (143), Expect = 2e-09
Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 507 IGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGR-EFLAELEMLSRLHHRNLVKLFGVC 564
+GEG + V++G VA+K ++ ++ G + E+ +L L H N+V L +
Sbjct: 13 LGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDII 72
Query: 565 IEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIAL-GAARGLAYLHEDSSPRV 623
+ LV+E + + L+ +L G L +KI + RGL+Y H+ ++
Sbjct: 73 HTERCLTLVFEYLDS-DLKQYLDN----CGNLMSMHNVKIFMFQLLRGLSYCHKR---KI 124
Query: 624 IHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAM-TGHLL 682
+HRD K N+L+ K++DFGLAR A K S V+ T Y P+ + +
Sbjct: 125 LHRDLKPQNLLINEKGELKLADFGLAR-AKSVPTKTYSNEVV-TLWYRPPDVLLGSTEYS 182
Query: 683 VKSDVYSYGVVLLELLTGR 701
D++ G +L E+ TGR
Sbjct: 183 TPIDMWGVGCILYEMATGR 201
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288 |
| >gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Score = 59.1 bits (143), Expect = 3e-09
Identities = 58/224 (25%), Positives = 100/224 (44%), Gaps = 30/224 (13%)
Query: 505 RIIGEGGFGVVYRGILDDGREV-AVKVLKRANQHGGREF------LAELEMLSRLHHRNL 557
R+IG G + V L R + A+KV+K+ + + E S +H L
Sbjct: 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETAS--NHPFL 58
Query: 558 VKLFGVCIEDNNRC-LVYELIHNGSLESHLHGDDKVNGPLD----WDARMKIALGAARGL 612
V L C + +R V E + G L H+ K+ P + + A + +AL
Sbjct: 59 VGLHS-CFQTESRLFFVIEFVSGGDLMFHMQRQRKL--PEEHARFYSAEISLALN----- 110
Query: 613 AYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLA 672
+LHE +I+RD K N+LL+ + K++D+G+ + + G+ ++ GT Y+A
Sbjct: 111 -FLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGD--TTSTFCGTPNYIA 164
Query: 673 PEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDL--SQPPGQEN 714
PE D ++ GV++ E++ GR P D+ +N
Sbjct: 165 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQN 208
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329 |
| >gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Score = 59.4 bits (144), Expect = 4e-09
Identities = 64/253 (25%), Positives = 101/253 (39%), Gaps = 49/253 (19%)
Query: 474 SIDSCAVTYTGTAKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKR 533
+ID+ Y A+ + + F ++IG G FG EV + K
Sbjct: 20 NIDNFLSRYEKAAEK--ITKLRMKAEDFDVIKVIGRGAFG-----------EVQLVRHKS 66
Query: 534 ANQHGGREFLAELEMLSR------------LHHRN---LVKLFGVCIEDNNRCLVYELIH 578
+ Q + L++ EM+ R + H N +V+L +D +V E +
Sbjct: 67 SKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMP 126
Query: 579 NGSLESHLHGDDKVNGPLDW----DARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNIL 634
G L + L + + P W A + +AL A + + IHRD K N+L
Sbjct: 127 GGDLVN-LMSNYDI--PEKWARFYTAEVVLALDAIHSMGF---------IHRDVKPDNML 174
Query: 635 LEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMT----GHLLVKSDVYSY 690
L+ K++DFG G T V GT Y++PE + G+ + D +S
Sbjct: 175 LDKSGHLKLADFGTCMKMDANGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSV 233
Query: 691 GVVLLELLTGRKP 703
GV L E+L G P
Sbjct: 234 GVFLYEMLVGDTP 246
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370 |
| >gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 59.2 bits (143), Expect = 4e-09
Identities = 60/209 (28%), Positives = 89/209 (42%), Gaps = 18/209 (8%)
Query: 494 IEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLH 553
IEKA GF G G + I + E V+ +A Q GG E +L ++
Sbjct: 89 IEKA--GFSILETFTPGAEGFAFACIDNKTCE---HVVIKAGQRGGT--ATEAHILRAIN 141
Query: 554 HRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLA 613
H ++++L G + CL+ + L +L K N + + I R +
Sbjct: 142 HPSIIQLKGTFTYNKFTCLILPR-YKTDLYCYL--AAKRNIAIC--DILAIERSVLRAIQ 196
Query: 614 YLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD-EGNKHISTHVMGTFGYLA 672
YLHE+ R+IHRD K+ NI + H + DFG A +D NK+ GT A
Sbjct: 197 YLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGW--AGTIATNA 251
Query: 673 PEYAMTGHLLVKSDVYSYGVVLLELLTGR 701
PE D++S G+VL E+ T
Sbjct: 252 PELLARDPYGPAVDIWSAGIVLFEMATCH 280
|
Length = 391 |
| >gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Score = 58.3 bits (141), Expect = 6e-09
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 16/205 (7%)
Query: 505 RIIGEGGFGVVYRGILDDGREV-AVKVLKRAN--QHGGRE-FLAELEMLS-RLHHRNLVK 559
+++G+G FG V L EV A+KVLK+ Q + + E +L+ H L
Sbjct: 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTA 60
Query: 560 LFGVCIEDNNRCL-VYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHED 618
L C + +R V E ++ G L + K + P +R A L +LH
Sbjct: 61 LHC-CFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEP---RSRF-YAAEVTLALMFLHRH 115
Query: 619 SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMT 678
VI+RD K NILL+ + K++DFG+ + + G +T GT Y+APE
Sbjct: 116 G---VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGV--TTTTFCGTPDYIAPEILQE 170
Query: 679 GHLLVKSDVYSYGVVLLELLTGRKP 703
D ++ GV++ E++ G+ P
Sbjct: 171 LEYGPSVDWWALGVLMYEMMAGQPP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321 |
| >gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Score = 58.4 bits (141), Expect = 6e-09
Identities = 65/249 (26%), Positives = 110/249 (44%), Gaps = 26/249 (10%)
Query: 501 FHTSRIIGEGGFGVVY--RGIL--DDGREVAVKVLKRA----NQHGGREFLAELEMLSRL 552
F +++G G +G V+ R + D G+ A+KVL++A E +L +
Sbjct: 2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHV 61
Query: 553 HHRN-LVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAA-R 610
LV L + L+ + + G + +HL+ D + + ++ G
Sbjct: 62 RQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFS-----EDEVRFYSGEIIL 116
Query: 611 GLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGY 670
L +LH+ +++RD K NILL+ + ++DFGL++ L E K + GT Y
Sbjct: 117 ALEHLHKLG---IVYRDIKLENILLDSEGHVVLTDFGLSKEFLSE-EKERTYSFCGTIEY 172
Query: 671 LAPEY--AMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVA-WARPLLTTKE 727
+APE GH D +S G+++ ELLTG P L G+ N + +R +L
Sbjct: 173 MAPEIIRGKGGHGKA-VDWWSLGILIFELLTGASPFTLE---GERNTQSEVSRRILKCDP 228
Query: 728 GLKTIIDPV 736
+ I P
Sbjct: 229 PFPSFIGPE 237
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332 |
| >gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Score = 58.3 bits (141), Expect = 6e-09
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 611 GLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGY 670
GL +LH +I+RD K N+LL+ D K++DFG+ + ++ G ST GT Y
Sbjct: 108 GLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMN-GEGKASTFC-GTPDY 162
Query: 671 LAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKP 703
+APE + G +S D +S+GV+L E+L G+ P
Sbjct: 163 IAPE-ILKGQKYNESVDWWSFGVLLYEMLIGQSP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316 |
| >gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Score = 57.8 bits (139), Expect = 8e-09
Identities = 64/228 (28%), Positives = 99/228 (43%), Gaps = 48/228 (21%)
Query: 501 FHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLH------- 553
F ++IG G FG EVAV LK A++ + L + EML R
Sbjct: 3 FEILKVIGRGAFG-----------EVAVVKLKNADKVFAMKILNKWEMLKRAETACFREE 51
Query: 554 --------HRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHG-DDKVNGPLD----WDA 600
++ + L ++NN LV + G L + L +D++ P D + A
Sbjct: 52 RDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRL--PEDMARFYLA 109
Query: 601 RMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHI 660
M IA+ + L Y +HRD K NIL++ + +++DFG +++G
Sbjct: 110 EMVIAIDSVHQLHY---------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQS 160
Query: 661 STHVMGTFGYLAPEY--AM---TGHLLVKSDVYSYGVVLLELLTGRKP 703
S V GT Y++PE AM G + D +S GV + E+L G P
Sbjct: 161 SVAV-GTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETP 207
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332 |
| >gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Score = 57.6 bits (139), Expect = 8e-09
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 611 GLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGY 670
GL +LH S +I+RD K N++L+ D K++DFG+ + + N+ ++ GT Y
Sbjct: 108 GLQFLH---SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNR--ASTFCGTPDY 162
Query: 671 LAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
+APE D +S+GV+L E+L G+ P
Sbjct: 163 IAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316 |
| >gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Score = 58.7 bits (142), Expect = 9e-09
Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 11/152 (7%)
Query: 507 IGEGGFGVVYRGIL-DDGREVAVKVLKRA---NQHGGREFLAELEMLSRLHHRNLVKLFG 562
I G FG VY G ++ + AVKV+K+A N++ + AE + L+ +V L+
Sbjct: 12 ISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYY 71
Query: 563 VCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPR 622
NN LV E + G ++S LH + G D + +K A L YLH
Sbjct: 72 SLQSANNVYLVMEYLIGGDVKSLLH----IYGYFDEEMAVKYISEVALALDYLHRHG--- 124
Query: 623 VIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654
+IHRD K N+L+ ++ K++DFGL++ L+
Sbjct: 125 IIHRDLKPDNMLISNEGHIKLTDFGLSKVTLN 156
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669 |
| >gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Score = 57.5 bits (139), Expect = 1e-08
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 20/213 (9%)
Query: 501 FHTSRIIGEGGFGVVYRGILDDGREV-AVKVLKR--ANQHGGRE-FLAE---LEMLSRLH 553
F+ ++G+G FG V E+ A+K+LK+ Q E + E L + +
Sbjct: 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPP 61
Query: 554 HRNLVKLFGVCIEDNNRC-LVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGL 612
L +L C + +R V E ++ G L H+ K P +IA+G L
Sbjct: 62 F--LTQLHS-CFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIG----L 114
Query: 613 AYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLA 672
+LH S +I+RD K N++L+ + K++DFG+ + + G + GT Y+A
Sbjct: 115 FFLH---SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKT--TRTFCGTPDYIA 169
Query: 673 PEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 705
PE D +++GV+L E+L G+ P D
Sbjct: 170 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFD 202
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324 |
| >gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 56.9 bits (137), Expect = 1e-08
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 33/212 (15%)
Query: 507 IGEGGFGVVYRGILDD---------GREVAVKVLKRANQHGGRE----FLAELEMLSRLH 553
+G G +Y GIL+ E +KV+ + R+ F M+ ++
Sbjct: 3 LGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVS 62
Query: 554 HRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLA 613
H+++V L+GVC+ D +V E + G L+ +H + + L + K+A A L+
Sbjct: 63 HKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMH---RKSDVLTTPWKFKVAKQLASALS 119
Query: 614 YLHEDSSPRVIHRDFKSSNILL-----EHDFTP--KVSDFGLARTALDEGNKHISTHVMG 666
YL ED ++H + + NILL + + P K+SD G+ T L +
Sbjct: 120 YL-EDK--DLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSR------QECVE 170
Query: 667 TFGYLAPEYAM-TGHLLVKSDVYSYGVVLLEL 697
++APE + +L + +D +S+G L E+
Sbjct: 171 RIPWIAPECVEDSKNLSIAADKWSFGTTLWEI 202
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262 |
| >gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 56.8 bits (137), Expect = 1e-08
Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 23/204 (11%)
Query: 521 DDGRE--VAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIH 578
++GRE V +KVL +++ F ++S++ H +L + GVC+ + +V E +
Sbjct: 40 NNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVE 99
Query: 579 NGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNIL---- 634
+G L+ L +K P+ W ++ +A A L+YL ED + ++H + + NIL
Sbjct: 100 HGPLDVCLR-KEKGRVPVAW--KITVAQQLASALSYL-EDKN--LVHGNVCAKNILLARL 153
Query: 635 -LEHDFTP--KVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTG-HLLVKSDVYSY 690
L +P K+SD G++ TAL + + ++APE G L +D +S+
Sbjct: 154 GLAEGTSPFIKLSDPGVSFTALSREER------VERIPWIAPECVPGGNSLSTAADKWSF 207
Query: 691 GVVLLEL-LTGRKPVDLSQPPGQE 713
G LLE+ G P+ P +E
Sbjct: 208 GTTLLEICFDGEVPLKERTPSEKE 231
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274 |
| >gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Score = 56.9 bits (137), Expect = 2e-08
Identities = 61/208 (29%), Positives = 91/208 (43%), Gaps = 23/208 (11%)
Query: 505 RIIGEGGFGVVYRGIL----DDGREVAVKVLKRANQHGGREF---LAELEMLSRLHHRNL 557
+++G+G FG V IL GR A+K+L++ E + E +L H L
Sbjct: 1 KLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 57
Query: 558 VKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGA--ARGLAYL 615
L + C V E + G L HL + + R + GA L YL
Sbjct: 58 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT-----EERARF-YGAEIVSALEYL 111
Query: 616 HEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEY 675
H S V++RD K N++L+ D K++DFGL + + +G + GT YLAPE
Sbjct: 112 H---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEYLAPEV 166
Query: 676 AMTGHLLVKSDVYSYGVVLLELLTGRKP 703
D + GVV+ E++ GR P
Sbjct: 167 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 194
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323 |
| >gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Score = 56.9 bits (137), Expect = 2e-08
Identities = 66/212 (31%), Positives = 94/212 (44%), Gaps = 17/212 (8%)
Query: 505 RIIGEGGFG-VVYRGILDDGREVAVKVLKRANQHGGRE---FLAELE-MLSRLHHRNLVK 559
++IG+G FG V+ DG AVKVL++ +E +AE +L L H LV
Sbjct: 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVG 60
Query: 560 LFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDS 619
L V + ++ G L HL + P AR A A + YLH
Sbjct: 61 LHYSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEP---RARF-YAAEVASAIGYLH--- 113
Query: 620 SPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTG 679
S +I+RD K NILL+ ++DFGL + ++ + ++ GT YLAPE
Sbjct: 114 SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP--EETTSTFCGTPEYLAPEVLRKE 171
Query: 680 HLLVKSDVYSYGVVLLELLTGRKPV---DLSQ 708
D + G VL E+L G P D+SQ
Sbjct: 172 PYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQ 203
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321 |
| >gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 56.5 bits (136), Expect = 2e-08
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 21/216 (9%)
Query: 501 FHTSRIIGEGGFGVVYRGILDDGR--EVAVKVLKRAN---QHGGREFLAELEMLSRLHHR 555
F+ R +G G FG V + VA+K +++ Q +E ++L+ ++H
Sbjct: 32 FNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHP 91
Query: 556 NLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYL 615
V L+G +++ LV E + G + L + + + +I L YL
Sbjct: 92 FCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLI----FEYL 147
Query: 616 HEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVM-GTFGYLAPE 674
S +++RD K N+LL+ D K++DFG A+ T+ + GT Y+APE
Sbjct: 148 Q---SLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVV------DTRTYTLCGTPEYIAPE 198
Query: 675 YAMT-GHLLVKSDVYSYGVVLLELLTGRKPVDLSQP 709
+ GH +D ++ G+ + E+L G P ++P
Sbjct: 199 ILLNVGHGKA-ADWWTLGIFIYEILVGCPPFYANEP 233
|
Length = 340 |
| >gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 56.5 bits (136), Expect = 2e-08
Identities = 63/211 (29%), Positives = 101/211 (47%), Gaps = 29/211 (13%)
Query: 507 IGEGGFGVVYRGILDD-GREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKL----- 560
IG+G FG VY+ D R A+KVL + +E +A+ E+ + RN++
Sbjct: 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSK------KEIVAKKEVAHTIGERNILVRTLLDE 54
Query: 561 --FGVCIE-----DNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLA 613
F V ++ D++ LV + + G L HL + + + + A+ IA L
Sbjct: 55 SPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFS---EDRAKFYIA-ELVLALE 110
Query: 614 YLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAP 673
+LH+ +++RD K NILL+ + DFGL++ L + NK +T GT YLAP
Sbjct: 111 HLHKYD---IVYRDLKPENILLDATGHIALCDFGLSKANLTD-NKTTNTFC-GTTEYLAP 165
Query: 674 EYAMTGHLLVKS-DVYSYGVVLLELLTGRKP 703
E + K D +S GV++ E+ G P
Sbjct: 166 EVLLDEKGYTKHVDFWSLGVLVFEMCCGWSP 196
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330 |
| >gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 56.6 bits (136), Expect = 2e-08
Identities = 50/167 (29%), Positives = 78/167 (46%), Gaps = 20/167 (11%)
Query: 609 ARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTF 668
A+G+ +L +S + IHRD + NILL + K+ DFGLAR + +
Sbjct: 189 AKGMEFL---ASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPL 245
Query: 669 GYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKE 727
++APE ++SDV+S+GV+L E+ + G P PG + + R L KE
Sbjct: 246 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY-----PGVKIDEEFCRRL---KE 297
Query: 728 GLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL 774
G + + P + Y T++ C E S RP E+V+ L
Sbjct: 298 GTR-MRAPDYTTPEMYQTMLD-------CWHGEPSQRPTFSELVEHL 336
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343 |
| >gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Score = 55.4 bits (133), Expect = 6e-08
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 501 FHTSRIIGEGGFGVVYRGILDDGREV-AVKVLKR--ANQHGGRE-FLAELEMLSRLHHRN 556
F+ ++G+G FG V E+ A+K+LK+ Q E + E +L+
Sbjct: 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPP 61
Query: 557 LVKLFGVCIEDNNRC-LVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYL 615
+ C + +R V E ++ G L + + P +IA+G L +L
Sbjct: 62 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIG----LFFL 117
Query: 616 HEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVM-GTFGYLAPE 674
H S +I+RD K N++L+ + K++DFG+ + + +G ++T GT Y+APE
Sbjct: 118 H---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG---VTTKTFCGTPDYIAPE 171
Query: 675 YAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 705
D +++GV+L E+L G+ P +
Sbjct: 172 IIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 202
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323 |
| >gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Score = 55.4 bits (133), Expect = 6e-08
Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 27/242 (11%)
Query: 474 SIDSCAVTYTGTAKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREV-AVKVLK 532
+ID+ Y T + D+ + ++IG G FG V R+V A+K+L
Sbjct: 20 NIDNFLNRYKDTINK--IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLS 77
Query: 533 R---ANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGD 589
+ + F E ++++ + +V+LF +D +V E + G L + +
Sbjct: 78 KFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY 137
Query: 590 DKVNGPLDW----DARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSD 645
D P W A + +AL A + + IHRD K N+LL+ K++D
Sbjct: 138 DV---PEKWARFYTAEVVLALDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLAD 185
Query: 646 FGLARTALDEGNKHISTHVMGTFGYLAPEYAMT----GHLLVKSDVYSYGVVLLELLTGR 701
FG EG T V GT Y++PE + G+ + D +S GV L E+L G
Sbjct: 186 FGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD 244
Query: 702 KP 703
P
Sbjct: 245 TP 246
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371 |
| >gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 56.3 bits (135), Expect = 6e-08
Identities = 61/242 (25%), Positives = 100/242 (41%), Gaps = 35/242 (14%)
Query: 492 NDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGRE-----FLAEL 546
+D E N + + IG G FG V+ ++ R K + G +E + E+
Sbjct: 6 DDGESRLNEYEVIKKIGNGRFGEVF--LVKHKRTQEFFCWKAISYRGLKEREKSQLVIEV 63
Query: 547 EMLSRLHHRNLVKLFGVCIEDNNRCL--VYELIHNGSLESHLHGDDKVNGPLDWDARMKI 604
++ L H+N+V+ + N+ L + E G L ++ K+ G ++ A + I
Sbjct: 64 NVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDI 123
Query: 605 ALGAARGLAYLHE----DSSPRVIHRDFKSSNILLEHDF-----------------TPKV 643
LAY H + RV+HRD K NI L K+
Sbjct: 124 TRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKI 183
Query: 644 SDFGLARTALDEGNKHISTHVMGTFGYLAPEYAM--TGHLLVKSDVYSYGVVLLELLTGR 701
DFGL++ E H +GT Y +PE + T KSD+++ G ++ EL +G+
Sbjct: 184 GDFGLSKNIGIESMAH---SCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGK 240
Query: 702 KP 703
P
Sbjct: 241 TP 242
|
Length = 1021 |
| >gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 55.2 bits (133), Expect = 8e-08
Identities = 46/190 (24%), Positives = 77/190 (40%), Gaps = 13/190 (6%)
Query: 522 DGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGS 581
++V VK + GG+ E+++L + HR ++ L + C+V +
Sbjct: 118 QRKKVIVKAVT-----GGKTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMP-KYKCD 171
Query: 582 LESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTP 641
L +++ +GPL + + I LAYLH +IHRD K+ NI L+
Sbjct: 172 LFTYVDR----SGPLPLEQAITIQRRLLEALAYLHGRG---IIHRDVKTENIFLDEPENA 224
Query: 642 KVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGR 701
+ DFG A + GT +PE K+D++S G+VL E+
Sbjct: 225 VLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKN 284
Query: 702 KPVDLSQPPG 711
+ Q
Sbjct: 285 VTLFGKQVKS 294
|
Length = 392 |
| >gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 8e-08
Identities = 61/249 (24%), Positives = 99/249 (39%), Gaps = 55/249 (22%)
Query: 499 NGFHTSRIIGEGGFGVVYRGIL--DDGREVAVKVLKRANQHGGREFL----AELEMLSRL 552
+ F + ++IG G FG V R + D G A+K L+++ +E + AE ++L+
Sbjct: 1 DDFESIKVIGRGAFGEV-RLVQKKDTGHIYAMKKLRKSEML-EKEQVAHVRAERDILAEA 58
Query: 553 HHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKV--NGPLDWDARMKIALGAAR 610
+ +VKL+ ++N L+ E + G + + L D + A +A+ +
Sbjct: 59 DNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIH 118
Query: 611 GLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLA-------RTALDEGNKHISTH 663
L Y IHRD K N+LL+ K+SDFGL RT H
Sbjct: 119 KLGY---------IHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPS 169
Query: 664 -----------------------------VMGTFGYLAPEYAMTGHLLVKSDVYSYGVVL 694
+GT Y+APE + + D +S GV++
Sbjct: 170 NFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIM 229
Query: 695 LELLTGRKP 703
E+L G P
Sbjct: 230 YEMLVGYPP 238
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364 |
| >gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 54.6 bits (131), Expect = 1e-07
Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Query: 589 DDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGL 648
DD PL + + + ARG+ +L +S + IHRD + NILL + K+ DFGL
Sbjct: 164 DDLWKSPLTMEDLICYSFQVARGMEFL---ASRKCIHRDLAARNILLSENNVVKICDFGL 220
Query: 649 ARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT 699
AR + + ++APE +SDV+S+GV+L E+ +
Sbjct: 221 ARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFS 271
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338 |
| >gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Score = 54.6 bits (131), Expect = 1e-07
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 609 ARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTF 668
ARG+ +L +S +HRD + N+LL K+ DFGLAR + + N
Sbjct: 247 ARGMEFL---ASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPV 303
Query: 669 GYLAPEYAMTGHLLVKSDVYSYGVVLLELLT 699
++APE SDV+SYG++L E+ +
Sbjct: 304 KWMAPESIFDNLYTTLSDVWSYGILLWEIFS 334
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400 |
| >gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Score = 53.5 bits (128), Expect = 2e-07
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 25/211 (11%)
Query: 505 RIIGEGGFGVVYRGILDDGREV-AVKVLKR---ANQHGGREFLAELEMLSRLHHRNLVKL 560
++IG G FG V ++V A+K+L + + F E ++++ + +V+L
Sbjct: 49 KVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 108
Query: 561 FGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDW----DARMKIALGAARGLAYLH 616
F +D +V E + G L + + D P W A + +AL A +
Sbjct: 109 FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDV---PEKWAKFYTAEVVLALDAIHSMG--- 162
Query: 617 EDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYA 676
+IHRD K N+LL+ K++DFG + G T V GT Y++PE
Sbjct: 163 ------LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAV-GTPDYISPEVL 215
Query: 677 MT----GHLLVKSDVYSYGVVLLELLTGRKP 703
+ G+ + D +S GV L E+L G P
Sbjct: 216 KSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 246
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370 |
| >gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 52.9 bits (127), Expect = 3e-07
Identities = 64/220 (29%), Positives = 100/220 (45%), Gaps = 32/220 (14%)
Query: 501 FHTSRIIGEGGFG-VVYRGILDDGREVAVKV------LKRANQHGGREFLAELEMLSRLH 553
F ++IG G FG V + + G+ A+K+ LKRA RE E ++L
Sbjct: 3 FEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFRE---ERDVLVNGD 59
Query: 554 HRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHG-DDKVNGPLD----WDARMKIALGA 608
R + L ++NN LV + G L + L +D++ P D + A M +A+ +
Sbjct: 60 RRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRL--PEDMARFYLAEMVLAIDS 117
Query: 609 ARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTF 668
L Y +HRD K N+LL+ + +++DFG L +G + V GT
Sbjct: 118 VHQLGY---------VHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAV-GTP 167
Query: 669 GYLAPEY--AM---TGHLLVKSDVYSYGVVLLELLTGRKP 703
Y++PE AM G + D +S GV + E+L G P
Sbjct: 168 DYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETP 207
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331 |
| >gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Score = 52.7 bits (126), Expect = 4e-07
Identities = 63/204 (30%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 505 RIIGEGGFG-VVYRGILDDGREVAVKVLKRA---NQHGGREFLAELE-MLSRLHHRNLVK 559
++IG+G FG V+ + + AVKVL++ + + ++E +L + H LV
Sbjct: 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 60
Query: 560 LFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDS 619
L + V + I+ G L HL + P AR A A L YLH
Sbjct: 61 LHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEP---RARF-YAAEIASALGYLH--- 113
Query: 620 SPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTG 679
S +++RD K NILL+ ++DFGL + + E N ST GT YLAPE
Sbjct: 114 SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENI-EHNGTTSTFC-GTPEYLAPEVLHKQ 171
Query: 680 HLLVKSDVYSYGVVLLELLTGRKP 703
D + G VL E+L G P
Sbjct: 172 PYDRTVDWWCLGAVLYEMLYGLPP 195
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325 |
| >gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Score = 51.7 bits (124), Expect = 8e-07
Identities = 60/224 (26%), Positives = 97/224 (43%), Gaps = 35/224 (15%)
Query: 499 NGFHTSRIIGEGGFGVVYRGILDD---GREVAVKVLKRANQHGGRE----FLAELEMLSR 551
F ++G G FG V ++ + G A+KV+K++ +E F E ++LS
Sbjct: 1 KDFDVKSLVGRGHFGEVQ--VVREKATGDIYAMKVMKKS-VLLAQETVSFFEEERDILSI 57
Query: 552 LHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWD------ARMKIA 605
+ + +L + +N LV E G L S L ++ D D A + +A
Sbjct: 58 SNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLL---NRYEDQFDEDMAQFYLAELVLA 114
Query: 606 LGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVM 665
+ + + Y +HRD K N+L++ K++DFG A L S +
Sbjct: 115 IHSVHQMGY---------VHRDIKPENVLIDRTGHIKLADFGSA-ARLTANKMVNSKLPV 164
Query: 666 GTFGYLAPEY--AMTGHLL----VKSDVYSYGVVLLELLTGRKP 703
GT Y+APE M G V+ D +S GV+ E++ GR P
Sbjct: 165 GTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSP 208
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330 |
| >gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Score = 51.2 bits (122), Expect = 1e-06
Identities = 64/229 (27%), Positives = 96/229 (41%), Gaps = 50/229 (21%)
Query: 501 FHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLH------H 554
F ++IG G FG EVAV +K + + L + EML R
Sbjct: 3 FEIIKVIGRGAFG-----------EVAVVKMKHTERIYAMKILNKWEMLKRAETACFREE 51
Query: 555 RNLVKLFGVCI----------EDNNRCLVYELIHNGSLESHLHG-DDKVNGPLD----WD 599
RN V + G C ++N LV + G L + L +D++ P D +
Sbjct: 52 RN-VLVNGDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRL--PEDMARFYI 108
Query: 600 ARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH 659
A M +A+ + L Y +HRD K N+LL+ + +++DFG +G
Sbjct: 109 AEMVLAIHSIHQLHY---------VHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQ 159
Query: 660 ISTHVMGTFGYLAPEY--AM---TGHLLVKSDVYSYGVVLLELLTGRKP 703
S V GT Y++PE AM G + D +S GV + E+L G P
Sbjct: 160 SSVAV-GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 207
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331 |
| >gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Score = 51.2 bits (122), Expect = 1e-06
Identities = 65/269 (24%), Positives = 108/269 (40%), Gaps = 53/269 (19%)
Query: 501 FHTSRIIGEGGFGVVYRGIL--DDGREVAVKVLKRANQHGGRE---FLAELEMLSRLHHR 555
F + ++IG G FG V R + D G A+K+L++A+ + AE ++L
Sbjct: 3 FESLKVIGRGAFGEV-RLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSL 61
Query: 556 NLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLD--WDARMKIALGAARGLA 613
+VK+F + N L+ E + G + + L D + + A +A+ + L
Sbjct: 62 WVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLG 121
Query: 614 YLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLA-------RTAL------------- 653
+ IHRD K N+LL+ K+SDFGL RT
Sbjct: 122 F---------IHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFT 172
Query: 654 -------------DEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTG 700
+ ++ +GT Y+APE M D +S GV++ E+L G
Sbjct: 173 FQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIG 232
Query: 701 RKPVDLSQPPGQ--ENLVAWARPLLTTKE 727
P S+ P + + ++ W L+ E
Sbjct: 233 YPPF-CSETPQETYKKVMNWKETLIFPPE 260
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363 |
| >gnl|CDD|223039 PHA03307, PHA03307, transcriptional regulator ICP4; Provisional | Back alignment and domain information |
|---|
Score = 52.1 bits (125), Expect = 1e-06
Identities = 43/212 (20%), Positives = 57/212 (26%), Gaps = 12/212 (5%)
Query: 58 TYSPIRSPHGSGRKSHGEVLPPPNKPHHISSTKHYSPTKGAHSHDAMRPSSITPAPSSLS 117
+ S S SG E P P T PT+ + PSS SS S
Sbjct: 235 SSSDSSSSESSGCGWGPENECP--LPRPAPIT---LPTRIWEASGWNGPSSRPGPASSSS 289
Query: 118 SFRGPTKKWVHG-PASSPFIPFHRHHHVRNKSRNSGSGPAYPTPAPSNSQQGPSVPSFQS 176
S R + P S P R + SR S S + S PS
Sbjct: 290 SPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSR 349
Query: 177 PLPSSSSWSSHAPAPSPKATSGNLNLPSL-----RPTISPTSSSLKKMKTP-PPSSVMTL 230
S P+ K + S RPT +++ +
Sbjct: 350 SPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPA 409
Query: 231 PPPPPNEDCGSVTCTEPLTYTPPGSPCGCVWP 262
P P+ P +P G WP
Sbjct: 410 GRPRPSPLDAGAASGAFYARYPLLTPSGEPWP 441
|
Length = 1352 |
| >gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Score = 51.2 bits (122), Expect = 1e-06
Identities = 61/243 (25%), Positives = 99/243 (40%), Gaps = 50/243 (20%)
Query: 501 FHTSRIIGEGGFGVVYRGIL--DDGREVAVKVLKRANQHGGREFL---AELEMLSRLHHR 555
F + ++IG G FG V R + D G A+K+L++A+ + AE ++L
Sbjct: 3 FESLKVIGRGAFGEV-RLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGA 61
Query: 556 NLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLD--WDARMKIALGAARGLA 613
+VK+F + N L+ E + G + + L D ++ + A +A+ A L
Sbjct: 62 WVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLG 121
Query: 614 YLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLA-------RTAL------------- 653
+ IHRD K N+LL+ K+SDFGL RT
Sbjct: 122 F---------IHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFS 172
Query: 654 -------------DEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTG 700
+ + ++ +GT Y+APE M D +S GV++ E+L G
Sbjct: 173 FQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIG 232
Query: 701 RKP 703
P
Sbjct: 233 YPP 235
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360 |
| >gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 50.7 bits (122), Expect = 2e-06
Identities = 66/244 (27%), Positives = 96/244 (39%), Gaps = 56/244 (22%)
Query: 501 FHTSRIIGEGGFGVVYRGILDD-GREVAVKVL------KRANQHGGREFLAELEMLSRLH 553
F +++G+G G V+ L G+ A+KVL KR L E E+L+ L
Sbjct: 3 FKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVK---RVLTEQEILATLD 59
Query: 554 HRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPL--DWDARMKIA-LGAAR 610
H L L+ + CLV + G L L + G + AR A + A
Sbjct: 60 HPFLPTLYASFQTETYLCLVMDYCPGGELFRLL---QRQPGKCLSEEVARFYAAEVLLA- 115
Query: 611 GLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLA--------------------- 649
L YLH +++RD K NILL +SDF L+
Sbjct: 116 -LEYLHLLG---IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRS 171
Query: 650 -------RTALDEGNKHISTHVMGTFGYLAPEY-AMTGHLLVKSDV--YSYGVVLLELLT 699
T +E + S +GT Y+APE + GH S V ++ G++L E+L
Sbjct: 172 SVNSIPSETFSEEPSF-RSNSFVGTEEYIAPEVISGDGH---GSAVDWWTLGILLYEMLY 227
Query: 700 GRKP 703
G P
Sbjct: 228 GTTP 231
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316 |
| >gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 2e-06
Identities = 51/213 (23%), Positives = 81/213 (38%), Gaps = 25/213 (11%)
Query: 505 RIIGEGGFGVVYRGILDDGREVAVKV--LKRANQHGGREFLAELEMLSRLHHRNLVKLFG 562
+ + + + VAVK L ++ + E+ +L H N++
Sbjct: 8 KCFEDLMIVHLAKHK-PTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVT 66
Query: 563 VCIEDNNRCLVYELIHNGS----LESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHED 618
I D+ +V L+ GS L++H G L A I L Y+H
Sbjct: 67 SFIVDSELYVVSPLMAYGSCEDLLKTHF-----PEG-LPELAIAFILKDVLNALDYIH-- 118
Query: 619 SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFG-----YLAP 673
S IHR K+S+ILL D +S + + + G + H +L+P
Sbjct: 119 -SKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSP 177
Query: 674 EY---AMTGHLLVKSDVYSYGVVLLELLTGRKP 703
E + G+ KSD+YS G+ EL G P
Sbjct: 178 EVLQQNLQGY-NEKSDIYSVGITACELANGHVP 209
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314 |
| >gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 4e-06
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 596 LDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655
L + + + A G+ +L +S +HRD + N+L+ K+ DFGLAR + +
Sbjct: 236 LSYMDLVGFSYQVANGMEFL---ASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRD 292
Query: 656 GNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT 699
N ++APE SDV+S+G++L E+ T
Sbjct: 293 SNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFT 336
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401 |
| >gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Score = 49.3 bits (117), Expect = 4e-06
Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 507 IGEGGFGVVYRGILDDGREVAVKVLKRANQHG-GREFLAELEMLSRLHHRNLVKLFGVCI 565
+G G +G VY+ DG++ LK+ G E+ +L L H N++ L V +
Sbjct: 9 VGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFL 68
Query: 566 EDNNR--CLVYELI-HNGSLESHLHGDDKVNG-PLDWDARMKIAL--GAARGLAYLHEDS 619
++R L+++ H+ H K N P+ M +L G+ YLH +
Sbjct: 69 SHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN- 127
Query: 620 SPRVIHRDFKSSNILLEHDFTP----KVSDFGLARTALDEGNKHIS--THVMGTFGYLAP 673
V+HRD K +NIL+ + K++D G AR + K ++ V+ TF Y AP
Sbjct: 128 --WVLHRDLKPANILVMGEGPERGRVKIADMGFARL-FNSPLKPLADLDPVVVTFWYRAP 184
Query: 674 EYAMTGHLLVKS-DVYSYGVVLLELLT 699
E + K+ D+++ G + ELLT
Sbjct: 185 ELLLGARHYTKAIDIWAIGCIFAELLT 211
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317 |
| >gnl|CDD|173766 cd08226, PK_STRAD_beta, Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Score = 49.2 bits (117), Expect = 5e-06
Identities = 38/108 (35%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 604 IALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTH 663
I GA RGL YLH++ IHR+ K+S+IL+ D +S + + G K +
Sbjct: 106 ILFGALRGLNYLHQNG---YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVY 162
Query: 664 VMGTFG-----YLAPEYA---MTGHLLVKSDVYSYGVVLLELLTGRKP 703
F +L+PE + G+ VKSD+YS G+ EL TGR P
Sbjct: 163 DFPQFSTSVLPWLSPELLRQDLYGYN-VKSDIYSVGITACELATGRVP 209
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. STRAD-beta is also referred to as ALS2CR2 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 2 protein), since the human gene encoding it is located within the juvenile ALS2 critical region on chromosome 2q33-q34. It is not linked to the development of ALS2. Length = 328 |
| >gnl|CDD|223039 PHA03307, PHA03307, transcriptional regulator ICP4; Provisional | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 1e-05
Identities = 45/226 (19%), Positives = 68/226 (30%), Gaps = 23/226 (10%)
Query: 13 CATPSALSLRGSAVTVALPPRRLPQNLPNIQPVSPGHPPSILPDHTYSPIRSPHGSGRKS 72
A S R +A+ ++ P P SP P + R P S S
Sbjct: 161 AVASDAASSRQAALPLSSPEETARA------PSSPPAEPPPSTPPAAASPRPPRRSSPIS 214
Query: 73 HGEVLPPPNKPHHISSTKHYSPTKGAHSHDAMR---PSSITPAPSSLSSFRGPTKKWVHG 129
P P + S + + S + P + P P + PT+ W
Sbjct: 215 ASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRP-APITLPTRIWEAS 273
Query: 130 PASSPFIPFHRHHHVRNKSRNSGSGPAYPTPAPSNSQQGPSVPSFQSPLPSSSSWSSHAP 189
+ P S +S P+P+PS+ P S +SSS SS
Sbjct: 274 GWNGP-----SSRPGPASSSSSPRER-SPSPSPSS----PGSGPAPSSPRASSSSSSSRE 323
Query: 190 APSPKATSGNLNLPSLRPTISPTSSSLKKMKTPPPSSVMTLPPPPP 235
+ S +S + S R S + +P P P
Sbjct: 324 SSSSSTSSSS---ESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPR 366
|
Length = 1352 |
| >gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Score = 47.7 bits (113), Expect = 1e-05
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 507 IGEGGFGVVYRGILDDGREVAVKVLKRANQHG-GREFLAELEMLSRLHHRNLVKLFGVCI 565
+G G +G VY+ DG++ LK+ G E+ +L L H N++ L V +
Sbjct: 9 VGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFL 68
Query: 566 EDNNR--CLVYELI-HNGSLESHLHGDDKVN-GPLDWDARMKIAL--GAARGLAYLHEDS 619
+R L+++ H+ H K N P+ M +L G+ YLH +
Sbjct: 69 SHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN- 127
Query: 620 SPRVIHRDFKSSNILLEHDFTP----KVSDFGLARTALDEGNKHIS--THVMGTFGYLAP 673
V+HRD K +NIL+ + K++D G AR + K ++ V+ TF Y AP
Sbjct: 128 --WVLHRDLKPANILVMGEGPERGRVKIADMGFARL-FNSPLKPLADLDPVVVTFWYRAP 184
Query: 674 EYAMTGHLLVKS-DVYSYGVVLLELLT 699
E + K+ D+++ G + ELLT
Sbjct: 185 ELLLGARHYTKAIDIWAIGCIFAELLT 211
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317 |
| >gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Score = 47.9 bits (114), Expect = 1e-05
Identities = 73/273 (26%), Positives = 109/273 (39%), Gaps = 63/273 (23%)
Query: 501 FHTSRIIGEGGFGVVYRGILDDGREV-AVKVLKRA-----NQHGGREFLAELEMLSRLHH 554
F + IG G FG V D + A+K L++A NQ AE ++L+ +
Sbjct: 3 FVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAA--HVKAERDILAEADN 60
Query: 555 RNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIA-LGAARGLA 613
+VKL+ + +N V + I G + S L L AR IA L A +
Sbjct: 61 EWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDL---ARFYIAELTCA--IE 115
Query: 614 YLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLA--------RTALDEGNKH------ 659
+H+ IHRD K NIL++ D K++DFGL +G+ H
Sbjct: 116 SVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSME 172
Query: 660 --------------------------ISTH-VMGTFGYLAPE-YAMTGHLLVKSDVYSYG 691
H ++GT Y+APE TG+ + D +S G
Sbjct: 173 PSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQL-CDWWSVG 231
Query: 692 VVLLELLTGRKPVDLSQPPG--QENLVAWARPL 722
V+L E+L G+ P L+ P Q ++ W L
Sbjct: 232 VILYEMLVGQPPF-LADTPAETQLKVINWETTL 263
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376 |
| >gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional | Back alignment and domain information |
|---|
Score = 47.6 bits (113), Expect = 3e-05
Identities = 48/248 (19%), Positives = 72/248 (29%), Gaps = 24/248 (9%)
Query: 17 SALSLRGSAVTVALPPRRLPQNLPNIQPVSPGHPPSILPDHTYSPIRSPHGSG--RKSHG 74
A + +PP P++ P VS P R+ S ++
Sbjct: 2633 PAANEPDPHPPPTVPPPERPRDDPAPGRVSR-------PRRARRLGRAAQASSPPQRPRR 2685
Query: 75 EVLPPPNKPHHISSTKHYSPTKGAHSHDAMRPSSITPAPSSLSSFRGPTKKWVHGPASSP 134
P + P + A+ ++ P + + P P + P
Sbjct: 2686 RAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVP 2745
Query: 135 FIPFHRHHHVRNKSRNSGSGPAYPTPAPSNSQQGPSVPSFQSPLPSSSSWSSHAPAPSPK 194
P R + +GP P P P+ GP P + +S S PSP
Sbjct: 2746 AGPATPGGPARPARPPTTAGPPAPAP-PAAPAAGP--PRRLTRPAVASLSESRESLPSPW 2802
Query: 195 ATSGNLNLPSLRPTISPTSSSLKKMKTPPPSSVMTLPPPPPNEDCGSVTCTEPLTYTPPG 254
+ P ++S PP S+ T PPPPP P P
Sbjct: 2803 DPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPP----------GPPP--PSL 2850
Query: 255 SPCGCVWP 262
G V P
Sbjct: 2851 PLGGSVAP 2858
|
Length = 3151 |
| >gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 4e-05
Identities = 49/182 (26%), Positives = 75/182 (41%), Gaps = 30/182 (16%)
Query: 556 NLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLD----WDARMKIALGAARG 611
N+V L + +++ LV + G L SH+ +N P + W A M +AL A
Sbjct: 46 NMVCLHKYIVSEDSVFLVLQHAEGGKLWSHI--SKFLNIPEECVKRWAAEMVVALDA--- 100
Query: 612 LAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYL 671
LH + ++ RD +NILL+ +++ F D + ++ Y
Sbjct: 101 ---LHREG---IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENM-----YC 149
Query: 672 APEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPG-----QENLVAW----ARPL 722
APE D +S G +L ELLTG+ V+ P G N+ W AR L
Sbjct: 150 APEVGGISEETEACDWWSLGAILFELLTGKTLVE-CHPSGINTHTTLNIPEWVSEEARSL 208
Query: 723 LT 724
L
Sbjct: 209 LQ 210
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237 |
| >gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 6e-05
Identities = 43/234 (18%), Positives = 67/234 (28%), Gaps = 17/234 (7%)
Query: 36 PQNLPNIQPVSPGHPPSILPDHTYSPIRSPHGS-GRKSHGEVLPPPNKPHHISSTKHYSP 94
+ P PP P SP + +PPP +P + S
Sbjct: 2604 DRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSR 2663
Query: 95 TKGAHSHDAM----------RPSSITPAPSSLSSF-RGPTKKWVHGPASSPFIPFHRHHH 143
+ A R + P SL+S P PA +
Sbjct: 2664 PRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPP 2723
Query: 144 VRNKSRNSGSGPAYP-TPAPSNSQQGPSVPSFQSPLPSSSSWSSHAPAPSPKATSGNLNL 202
+R + PA P PAP GP+ P + + ++ PAP+P A
Sbjct: 2724 GPAAAR--QASPALPAAPAPPAVPAGPATPGGPARPARPPT-TAGPPAPAPPAAPAAGPP 2780
Query: 203 PSL-RPTISPTSSSLKKMKTPPPSSVMTLPPPPPNEDCGSVTCTEPLTYTPPGS 255
L RP ++ S S + + +P + P P +
Sbjct: 2781 RRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSA 2834
|
Length = 3151 |
| >gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 7e-05
Identities = 45/239 (18%), Positives = 63/239 (26%), Gaps = 25/239 (10%)
Query: 14 ATPSALSLRGSAVTVALPPRRLPQNLPNIQPVSPGHPPSILPDHTYSPIRSPHGSGRKSH 73
ATP + T A PP P P P + P P + R+S
Sbjct: 2749 ATPGGPARPARPPTTAGPPA----------PAPPAAPAAGPPRRLTRPAVASLSESRESL 2798
Query: 74 GEVLPPPNKPHHISSTKHYSPTKGAHSHDAMRPSSITPAPSSLSSFRGPTKKWVHGPASS 133
P + P + + P + + P+S P P + G + +
Sbjct: 2799 PSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGG-SVA 2857
Query: 134 PFIPFHRHHHVRNKSRNSGSGPAYPTPAPSNSQQGPSVPSFQSPLPSSSSWSSHAPAPSP 193
P R R SR+ + PA P P P+V P P
Sbjct: 2858 PGGDVRR----RPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQA 2913
Query: 194 KATSGNLNLPSLRPTISPTSSSLKKMKTPPPSSVMTLPPPPPNEDCGSVTCTEPLTYTP 252
P P + + PPP PP P D P
Sbjct: 2914 PP----------PPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQP 2962
|
Length = 3151 |
| >gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 8e-05
Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 38/192 (19%)
Query: 524 REVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVC-IEDNNRCL-------VYE 575
R +A +V +A + E+ L RL+H N++K+ + E N + +Y
Sbjct: 194 RLIAKRV--KAGSRAAIQLENEILALGRLNHENILKIEEILRSEANTYMITQKYDFDLYS 251
Query: 576 LIHNGSLESHLHGDDKVNGPLDWDAR--MKIALGAARGLAYLHEDSSPRVIHRDFKSSNI 633
+++ + D + PL R MK L A + Y+H ++IHRD K NI
Sbjct: 252 FMYDEAF-------DWKDRPLLKQTRAIMKQLLCA---VEYIH---DKKLIHRDIKLENI 298
Query: 634 LLEHDFTPKVSDFGLA------RTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDV 687
L D + DFG A R A D G +GT +PE +D+
Sbjct: 299 FLNCDGKIVLGDFGTAMPFEKEREAFDYG-------WVGTVATNSPEILAGDGYCEITDI 351
Query: 688 YSYGVVLLELLT 699
+S G++LL++L+
Sbjct: 352 WSCGLILLDMLS 363
|
Length = 501 |
| >gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 8e-05
Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 35/167 (20%)
Query: 499 NGFHTSRIIGEGGFGVVYRGI--LDDGREVAVKVLKRANQHGGREFL---AELEMLSRLH 553
FHT ++IG+G FG V R + D G+ A+K L ++ + AE ++L+
Sbjct: 1 EDFHTVKVIGKGAFGEV-RLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESD 59
Query: 554 HRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWD-----------ARM 602
+V L+ + L+ E + G L + L + +D A
Sbjct: 60 SPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTML---------IKYDTFSEDVTRFYMAEC 110
Query: 603 KIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLA 649
+A+ A L + IHRD K NIL++ K+SDFGL+
Sbjct: 111 VLAIEAVHKLGF---------IHRDIKPDNILIDRGGHIKLSDFGLS 148
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377 |
| >gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 1e-04
Identities = 31/148 (20%), Positives = 53/148 (35%), Gaps = 16/148 (10%)
Query: 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLV--KLFG 562
+++ G VY + + +K+ + RE E+ +L L + L K+
Sbjct: 4 KLLKGGLTNRVYL-LGTKDEDYVLKINPSREKGADRE--REVAILQLLARKGLPVPKVLA 60
Query: 563 VCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPR 622
D L+ E I G + ++K IA A LA LH+
Sbjct: 61 SGESDGWSYLLMEWIE-GETLDEVSEEEKE----------DIAEQLAELLAKLHQLPLLV 109
Query: 623 VIHRDFKSSNILLEHDFTPKVSDFGLAR 650
+ H D NIL++ + D+ A
Sbjct: 110 LCHGDLHPGNILVDDGKILGIIDWEYAG 137
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155 |
| >gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 43.7 bits (103), Expect = 3e-04
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 505 RIIGEGGFGVVYR------GILDDGREVAVKVLKRANQHGGREFL-AELEMLSRL-HHRN 556
+ +G G FG V G D+ VAVK+LK + RE L +EL++LS L H+N
Sbjct: 44 KTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKN 103
Query: 557 LVKLFGVCIEDNNRCLVYELIHNGSL 582
+V L G C ++ E G L
Sbjct: 104 IVNLLGACTHGGPVLVITEYCCYGDL 129
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374 |
| >gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Score = 42.9 bits (102), Expect = 4e-04
Identities = 44/157 (28%), Positives = 63/157 (40%), Gaps = 24/157 (15%)
Query: 553 HHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGL 612
+ N +KL+ L+ + I +G L L K G L KI L
Sbjct: 67 DNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLL----KKEGKLSEAEVKKIIRQLVEAL 122
Query: 613 AYLHEDSSPRVIHRDFKSSNILLEHDFTPK-----VSDFGLARTALDEGNKHISTHVMGT 667
LH +IH D K N+L + + D+GL + G S + GT
Sbjct: 123 NDLH---KHNIIHNDIKLENVL----YDRAKDRIYLCDYGLCKI---IGTP--SCY-DGT 169
Query: 668 FGYLAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKP 703
Y +PE + GH S D ++ GV+ ELLTG+ P
Sbjct: 170 LDYFSPE-KIKGHNYDVSFDWWAVGVLTYELLTGKHP 205
|
Length = 267 |
| >gnl|CDD|217393 pfam03154, Atrophin-1, Atrophin-1 family | Back alignment and domain information |
|---|
Score = 43.5 bits (102), Expect = 6e-04
Identities = 59/238 (24%), Positives = 78/238 (32%), Gaps = 28/238 (11%)
Query: 36 PQNLPNIQ-PVSPGHPPSILPDHTYSPIRSPHGSGRKSHGEVLPPPNKPHHISSTKHYSP 94
PQ P+IQ P PS P + P GS + P P + S P
Sbjct: 175 PQGPPSIQVPPGAALAPSAPPPTPSAQAVPPQGSPIAAQPAPQPQQPSPLSLISAPSLHP 234
Query: 95 TKGAHSHDAMRP------SSITPAPSSL---SSFRGPTKKWVHGPASSPFIPFHRHHH-V 144
+ H ++P S PAPSS SS GP H P H +
Sbjct: 235 QRLPSPHPPLQPQTASQQSPQPPAPSSRHPQSSHHGPGPPMPHALQQGPVFLQHPSSNPP 294
Query: 145 RNKSRNSGSGPAYPTPA---------PSNSQQGPSVPSFQSPLPSSSSWSSHAPAPSPKA 195
+ P P P+ PS S P P + PLP + S P P+
Sbjct: 295 QPFGLAQSQVPPLPLPSQAQPHSHTPPSQSALQPQQPPREQPLPPAPSMPHIKPPPTTP- 353
Query: 196 TSGNLNLPSLRPTISPTSSSLKKMKTPPPSSVMTLPPPPPNEDCGSVTCTEPLTYTPP 253
+P L L+ +P P LPPPP + S+ P + PP
Sbjct: 354 ------IPQLPNQSHKHPPHLQG-PSPFPQMPSNLPPPPALKPLSSLPTHHPPSAHPP 404
|
Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteristic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity. Length = 979 |
| >gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 0.001
Identities = 44/264 (16%), Positives = 65/264 (24%), Gaps = 27/264 (10%)
Query: 24 SAVTVALPPRRLPQNLPNIQPVSPGHP-PSILPD---------------HTYSPIRSPHG 67
A A P P+ P +P P+ILPD + S
Sbjct: 2490 FAAGAAPDPGGGGPPDPDAPP-APSRLAPAILPDEPVGEPVHPRMLTWIRGLEELASDDA 2548
Query: 68 SGRKSHGEVLPPPNKPHHISSTKHYS--PTKGAHSHDAMRPSSITPAPSSLSSFRGPTKK 125
PP P + P++ A + A RP P + +
Sbjct: 2549 GDPPPPLPPAAPPAAPDRSVPPPRPAPRPSEPAVTSRARRP-DAPPQSARPRAPVDDRGD 2607
Query: 126 WVHGPASSPFIP-FHRHHHVRNKSRNSGSGPAYPTPAPSNSQQGPSVPSFQSPLPSSSSW 184
SP P H + + P P + P +
Sbjct: 2608 PRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRA 2667
Query: 185 SSHAPAPSPKATSGNLNLPSLRPTISPTSSSL------KKMKTPPPSSVMTLPPPPPNED 238
A + + RPT+ +S + P + V P PP
Sbjct: 2668 RRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAA 2727
Query: 239 CGSVTCTEPLTYTPPGSPCGCVWP 262
+ P PP P G P
Sbjct: 2728 ARQASPALPAAPAPPAVPAGPATP 2751
|
Length = 3151 |
| >gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 0.001
Identities = 42/239 (17%), Positives = 60/239 (25%), Gaps = 38/239 (15%)
Query: 44 PVSPGHPPSILPDHTYSPIR------SPHGSGRKSHGEVLPPPNKPHHISSTKHYSPTKG 97
P P P PD + P R P + R + P +P
Sbjct: 2553 PPLPPAAPPAAPDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSARPR----------APV 2602
Query: 98 AHSHDAMRPSSITPAPSSLSSFRGPTKKWVHGPASSPFIPFHRHHHVRNKSRNSGSGPAY 157
D P+ +P P + P P+ + P PA
Sbjct: 2603 DDRGDPRGPAPPSPLPPDTHAPDPPPP----SPSPAANEPDPHPPPTVPPPERPRDDPAP 2658
Query: 158 P-------------TPAPSNSQQGPSVPSFQSPLPSSSSWS-----SHAPAPSPKATSGN 199
S+ Q P + + + S +S + P P+P A
Sbjct: 2659 GRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSA 2718
Query: 200 LNLPSLRPTISPTSSSLKKMKTPPPSSVMTLPPPPPNEDCGSVTCTEPLTYTPPGSPCG 258
LP S +L PP P P T P PP +P
Sbjct: 2719 TPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAA 2777
|
Length = 3151 |
| >gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 0.001
Identities = 37/146 (25%), Positives = 56/146 (38%), Gaps = 48/146 (32%)
Query: 624 IHRDFKSSNILLEHDFTPKVSDFGLA---------------------------------- 649
IHRD K NIL++ D K++DFGL
Sbjct: 123 IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPAN 182
Query: 650 -----------RTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELL 698
R A + + ++ ++GT Y+APE + D +S GV+L E+L
Sbjct: 183 CRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 242
Query: 699 TGRKPVDLSQPP--GQENLVAWARPL 722
G+ P L+Q P Q ++ W L
Sbjct: 243 VGQPPF-LAQTPLETQMKVINWQTSL 267
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382 |
| >gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 0.002
Identities = 51/262 (19%), Positives = 72/262 (27%), Gaps = 29/262 (11%)
Query: 16 PSALSLRGSAVTVALPPRRLPQNLPNIQPVSPGHP--------PSILPDHTYSPIRSPHG 67
+A GS ++A PP P P + P P +P
Sbjct: 2686 RAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVP 2745
Query: 68 SGRKSHGEVLPPPNKPHHISSTKHYSPTKGAHSHDAMRPSSITPAPSSLS-SFRGPTKKW 126
+G + G P P ++ +P A PA +SLS S W
Sbjct: 2746 AGPATPGGPARPARPP---TTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPW 2802
Query: 127 VHGPASSPFIPFHRHHHVRNKSRNSGSGPAYPTPAPSNSQQGPSVPS---FQSPLPSSSS 183
+ + + + PA P P P+++Q P LP S
Sbjct: 2803 DPADPPAAVLA-------PAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGS 2855
Query: 184 ------WSSHAPAPSPKATSGNLNLPSLRPTISPT-SSSLKKMKTPPPSSVMTLPPPPPN 236
P+ SP A P +R P S S + PP P P
Sbjct: 2856 VAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPP 2915
Query: 237 EDCGSVTCTEPLTYTPPGSPCG 258
P PP P
Sbjct: 2916 PPQPQPQPPPPPQPQPPPPPPP 2937
|
Length = 3151 |
| >gnl|CDD|223554 COG0478, COG0478, RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 0.002
Identities = 46/209 (22%), Positives = 74/209 (35%), Gaps = 49/209 (23%)
Query: 466 SMLSSSSVSIDSCAVTYTG----TAKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGILD 521
++S ++S + +T++G I +A IG G VY I
Sbjct: 59 KLVSRRTISYEGYQLTFSGYDALALHALVKRGIVEAI-----GTKIGVGKESDVYVAIDP 113
Query: 522 DGREVAVKVLKRANQHG---------GREFLAELEMLSRLH---------HRNLVKLFGV 563
GR+VAVK ++ G R++LA+ E S L+ L +L+
Sbjct: 114 KGRKVAVKF----HRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPE 169
Query: 564 CIE-----DNNR-CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHE 617
++ NR +V E I G L D + + D + L R
Sbjct: 170 GVKVPKPIAWNRHAVVMEYI-EGVELYRLRLDVE-----NPDEILDKILEEVRKAYRRG- 222
Query: 618 DSSPRVIHRDFKSSNILLEHDFTPKVSDF 646
++H D NIL+ D V D+
Sbjct: 223 -----IVHGDLSEFNILVTEDGDIVVIDW 246
|
Length = 304 |
| >gnl|CDD|215638 PLN03225, PLN03225, Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 0.002
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 13/68 (19%)
Query: 487 KTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVK--VLKRANQHGGREFLA 544
+F +D F + +GEG FGVVY+ L + + VLK+A ++G
Sbjct: 127 PSFKKDD-------FVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA----V 175
Query: 545 ELEMLSRL 552
E+ M R+
Sbjct: 176 EIWMNERV 183
|
Length = 566 |
| >gnl|CDD|218439 pfam05109, Herpes_BLLF1, Herpes virus major outer envelope glycoprotein (BLLF1) | Back alignment and domain information |
|---|
Score = 41.3 bits (96), Expect = 0.002
Identities = 44/215 (20%), Positives = 69/215 (32%), Gaps = 11/215 (5%)
Query: 44 PVSPGHPPSILPDHTYSPIRSPHGSGRKSHGEVLPPPNKPHHISSTKHYSPTKGAHSHDA 103
P +P P T S G+ + LP P +++ + T +
Sbjct: 450 PTTP-SLPPASTGPTVSTADPTSGTPTGTTSSTLPEDTSPTSRTTSATPNATSPTPAVTT 508
Query: 104 MRPSSITPAPSSLSSFRGPTKKWVHGPASSPFIPFHRHHHVRNKSRNSGSGPAYPTPAPS 163
+S T +S + V G ++ P S + + P +P
Sbjct: 509 PNATSPTTQKTSDTPNATSPTPIVIGVTTTATSP-----PTGTTSVPNATSPQVTEESPV 563
Query: 164 NSQQGPSVPSFQSPLPSSSSWSSHAPAPSPKATSGNLNLPSLRPTISPTSSSLKKMKTPP 223
N+ P V S S L S+ + H SP TS P + + T S TP
Sbjct: 564 NNTNTPVVTSAPSVLTSAVTTGQHGTGSSP--TSQ---QPGIPSSSHSTPRSNSTSTTPL 618
Query: 224 PSSVMTLPPPPPNEDCGSVTCTEPLTYTPPGSPCG 258
+S E+ SV T ++ PG G
Sbjct: 619 LTSAHPTGGENITEETPSVPSTTHVSTLSPGPGPG 653
|
This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo. Length = 830 |
| >gnl|CDD|223065 PHA03378, PHA03378, EBNA-3B; Provisional | Back alignment and domain information |
|---|
Score = 41.2 bits (96), Expect = 0.003
Identities = 43/216 (19%), Positives = 62/216 (28%), Gaps = 20/216 (9%)
Query: 42 IQPVSP---GHPPSILPDHTYSPIRSPHGSGRKSHGEVLPPPNKPHHISSTKHYSPTKGA 98
IQP++ S P + +P PH S E PP HI T
Sbjct: 574 IQPLTSPTTSQLASSAPSYAQTPWPVPHPS---QTPE---PPTTQSHIPETSAPRQWPMP 627
Query: 99 HSHDAMRPSSITPAPSSLSSFRGPTKKWVHGP-------ASSPFIPFHRHHHVRNKSRNS 151
MRP + P ++ F P + IP+ N
Sbjct: 628 LRPIPMRPLRMQPITFNVLVFPTPHQPPQVEITPYKPTWTQIGHIPYQPSPTGANTMLPI 687
Query: 152 GSGPAYPTPAPSNSQQGPSVPSFQSPLPSSSSWSSHAPAPSPKATSGNLNLPSLRPTISP 211
P P P P P P + ++ A P A G P+ P +
Sbjct: 688 QWAPGTMQPPPR--APTPMRPPAAPPGRAQRPAAATGRARPPAAAPGRARPPAAAPGRAR 745
Query: 212 TSSSLKKMKTPPPSSVMTLPPPPPNEDCGSVTCTEP 247
++ PP ++ PP G+ T P
Sbjct: 746 PPAAAPGRARPPAAA--PGRARPPAAAPGAPTPQPP 779
|
Length = 991 |
| >gnl|CDD|217393 pfam03154, Atrophin-1, Atrophin-1 family | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 0.004
Identities = 59/235 (25%), Positives = 74/235 (31%), Gaps = 22/235 (9%)
Query: 36 PQNLPNIQPVSPGHPPSILPDHTYSPIRSPHGSGRKSHGEVLPP-PNKPHHISSTKHYSP 94
P L Q P P P +S + + LPP P+ PH P
Sbjct: 296 PFGLAQSQVPPLPLPSQAQPHSHTPPSQSALQPQQPPREQPLPPAPSMPHIKPPPTTPIP 355
Query: 95 TKGAHSHDAM-RPSSITPAPSSLSSFRGPTKKWVHGPASSPFIPFHRHHHVRNKSRNSGS 153
SH +P P S+ P PA P HH S
Sbjct: 356 QLPNQSHKHPPHLQGPSPFPQMPSNLPPP-------PALKPLSSLPTHH--------PPS 400
Query: 154 GPAYPTPAPSNSQQGPSVPSFQSPLPSSSSWSSHAPAPSPKATSGNLNLPSLRPTIS-PT 212
P SQ SVP+ Q P+ + S S P S SG + P P P
Sbjct: 401 AHPPPLQLMPQSQPLQSVPA-QPPVLTQSQ--SLPPKASTHPHSGLHSGPPQSPFAQHPF 457
Query: 213 SSSLKKMKTPPPSSVMTLPPPPPNEDCGSVTCTEPLTYTPPGSPCGCVWP-IQVK 266
+S PPPS + P PP GS L + + G P IQ+K
Sbjct: 458 TSGGLPAIGPPPSLPTSTPAAPPRASSGSQPPGSALPSSGGCAGPGPPLPPIQIK 512
|
Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteristic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity. Length = 979 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 897 | |||
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 100.0 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 100.0 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 100.0 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 100.0 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 100.0 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 100.0 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.98 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.98 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.98 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.98 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.97 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.97 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.97 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.97 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.97 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.97 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.97 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.97 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.97 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.97 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.97 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.97 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.96 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.96 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.96 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.96 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.96 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.96 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.96 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.96 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.96 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.96 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.96 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.95 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.95 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.95 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.95 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.94 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.94 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.94 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.94 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.93 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.93 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.93 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.91 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.91 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.91 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.9 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.9 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.89 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.88 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.88 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.86 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.83 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.83 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.81 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.81 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.81 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.79 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.79 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.76 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.74 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.73 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.73 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.73 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.72 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.69 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.69 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.69 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.68 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.66 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.66 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.63 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.62 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.58 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.57 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.52 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.51 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.38 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.32 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.26 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.2 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.17 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.16 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 99.07 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.0 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 98.99 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 98.9 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 98.75 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 98.75 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 98.74 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 98.68 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 98.67 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 98.43 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.41 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.34 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 98.22 | |
| TIGR02172 | 226 | Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou | 98.21 | |
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 98.21 | |
| PF01636 | 239 | APH: Phosphotransferase enzyme family This family | 98.2 | |
| COG4248 | 637 | Uncharacterized protein with protein kinase and he | 98.11 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 98.06 | |
| PF06176 | 229 | WaaY: Lipopolysaccharide core biosynthesis protein | 98.05 | |
| cd05150 | 244 | APH Aminoglycoside 3'-phosphotransferase (APH). Th | 98.0 | |
| COG1718 | 268 | RIO1 Serine/threonine protein kinase involved in c | 97.98 | |
| PLN02876 | 822 | acyl-CoA dehydrogenase | 97.87 | |
| PF12260 | 188 | PIP49_C: Protein-kinase domain of FAM69; InterPro: | 97.83 | |
| PRK10593 | 297 | hypothetical protein; Provisional | 97.8 | |
| cd05155 | 235 | APH_ChoK_like_1 Uncharacterized bacterial proteins | 97.75 | |
| KOG1235 | 538 | consensus Predicted unusual protein kinase [Genera | 97.75 | |
| cd05157 | 235 | ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. | 97.59 | |
| COG2112 | 201 | Predicted Ser/Thr protein kinase [Signal transduct | 97.56 | |
| PF10707 | 199 | YrbL-PhoP_reg: PhoP regulatory network protein Yrb | 97.53 | |
| TIGR02721 | 256 | ycfN_thiK thiamine kinase. Members of this family | 97.48 | |
| cd05153 | 296 | HomoserineK_II Homoserine Kinase, type II. Homoser | 97.41 | |
| PF13095 | 207 | FTA2: Kinetochore Sim4 complex subunit FTA2 | 97.4 | |
| PRK05231 | 319 | homoserine kinase; Provisional | 97.23 | |
| PRK09550 | 401 | mtnK methylthioribose kinase; Reviewed | 97.12 | |
| TIGR00938 | 307 | thrB_alt homoserine kinase, Neisseria type. Homose | 97.0 | |
| cd05156 | 302 | ChoK_euk Choline Kinase (ChoK) in eukaryotes. The | 96.99 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 96.81 | |
| PF03881 | 288 | Fructosamin_kin: Fructosamine kinase; InterPro: IP | 96.8 | |
| cd05152 | 276 | MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH | 96.46 | |
| KOG1826 | 2724 | consensus Ras GTPase activating protein RasGAP/neu | 96.35 | |
| PLN02236 | 344 | choline kinase | 96.17 | |
| KOG2268 | 465 | consensus Serine/threonine protein kinase [Signal | 96.12 | |
| COG3173 | 321 | Predicted aminoglycoside phosphotransferase [Gener | 96.04 | |
| TIGR02906 | 313 | spore_CotS spore coat protein, CotS family. Member | 95.7 | |
| COG2334 | 331 | Putative homoserine kinase type II (protein kinase | 95.67 | |
| KOG2270 | 520 | consensus Serine/threonine protein kinase involved | 95.45 | |
| PLN02756 | 418 | S-methyl-5-thioribose kinase | 95.43 | |
| PLN02421 | 330 | phosphotransferase, alcohol group as acceptor/kina | 95.37 | |
| PF01633 | 211 | Choline_kinase: Choline/ethanolamine kinase; Inter | 95.27 | |
| TIGR02904 | 309 | spore_ysxE spore coat protein YsxE. Members of thi | 95.26 | |
| TIGR01767 | 370 | MTRK 5-methylthioribose kinase. This enzyme is inv | 94.54 | |
| PRK11768 | 325 | serine/threonine protein kinase; Provisional | 94.45 | |
| PTZ00384 | 383 | choline kinase; Provisional | 94.12 | |
| PRK06148 | 1013 | hypothetical protein; Provisional | 93.58 | |
| PF07387 | 308 | Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099 | 93.54 | |
| PF01102 | 122 | Glycophorin_A: Glycophorin A; InterPro: IPR001195 | 93.47 | |
| PRK12396 | 409 | 5-methylribose kinase; Reviewed | 92.96 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 92.76 | |
| PF02958 | 294 | EcKinase: Ecdysteroid kinase; InterPro: IPR004119 | 92.33 | |
| PTZ00382 | 96 | Variant-specific surface protein (VSP); Provisiona | 91.58 |
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-55 Score=492.29 Aligned_cols=290 Identities=56% Similarity=0.947 Sum_probs=256.5
Q ss_pred CcceecHHHHHHhhCCceeeeEEeecCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeee
Q 002647 485 TAKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVC 564 (897)
Q Consensus 485 ~~k~f~~~ei~~at~~y~~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~ 564 (897)
..+.|++.|+..||++|...++||+|+||.||+|.+.+|+.||||++........++|.+|+++|.+++|+|+|+|+|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 56789999999999999999999999999999999999999999988765433146799999999999999999999999
Q ss_pred ecCCc-eEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEE
Q 002647 565 IEDNN-RCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKV 643 (897)
Q Consensus 565 ~~~~~-~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKL 643 (897)
.+.+. .+||||||++|+|.++|+..... .|+|.+|++||.++|+||+|||+.+.++|||||||++|||||+++++||
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~--~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKl 218 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE--PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKL 218 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCC--CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEc
Confidence 99984 99999999999999999865432 8999999999999999999999999899999999999999999999999
Q ss_pred eccCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcc
Q 002647 644 SDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLL 723 (897)
Q Consensus 644 sDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~ 723 (897)
+|||+|+..... .....+...||.+|+|||++..+.++.|+|||||||+|+||+||+.+.+........+++.|++..+
T Consensus 219 sDFGLa~~~~~~-~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~ 297 (361)
T KOG1187|consen 219 SDFGLAKLGPEG-DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLL 297 (361)
T ss_pred cCccCcccCCcc-ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHH
Confidence 999999764321 2222211189999999999999999999999999999999999999998776566677999998877
Q ss_pred cccccccccccchhc-cCCCH-HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 002647 724 TTKEGLKTIIDPVIE-SNISY-DTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVC 778 (897)
Q Consensus 724 ~~~e~l~~iiDp~l~-~~~~~-e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~ 778 (897)
... .+.+++|+.+. ..+.. +++.++..++.+|++.++.+||+|.||++.|+.+.
T Consensus 298 ~~~-~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 298 EEG-KLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred HCc-chhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 654 89999999987 55554 78999999999999999999999999999996543
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-45 Score=413.71 Aligned_cols=259 Identities=34% Similarity=0.573 Sum_probs=212.7
Q ss_pred eeeEEeecCceEEEEEEecCCCEEEEEEeecccccc--hHHHHHHHHHHhhccCCceeeEeeeeecCC-ceEEEEeeccC
Q 002647 503 TSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHG--GREFLAELEMLSRLHHRNLVKLFGVCIEDN-NRCLVYELIHN 579 (897)
Q Consensus 503 ~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~--~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~-~~~LV~Ey~~g 579 (897)
..+.||+|+||+||+|.+.....||||++....... .++|.+|+.+|.+|+|||||+++|+|.+.. ..++|||||++
T Consensus 45 ~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~ 124 (362)
T KOG0192|consen 45 IEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPG 124 (362)
T ss_pred hhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCC
Confidence 345699999999999999843449999998644322 458999999999999999999999999987 79999999999
Q ss_pred CccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCC-ceEEeccCcchhcccCCCc
Q 002647 580 GSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDF-TPKVSDFGLARTALDEGNK 658 (897)
Q Consensus 580 GSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~-~vKLsDFGLAr~~~~~~~~ 658 (897)
|+|.++|+.. ....+++..+++|+.|||+||+|||+++. |||||||++||||+.++ ++||+|||+++......
T Consensus 125 GsL~~~l~~~--~~~~l~~~~~l~~aldiArGm~YLH~~~~--iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~-- 198 (362)
T KOG0192|consen 125 GSLSVLLHKK--RKRKLPLKVRLRIALDIARGMEYLHSEGP--IIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK-- 198 (362)
T ss_pred CcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcCCC--eeecccChhhEEEcCCCCEEEECCCccceeecccc--
Confidence 9999999753 35689999999999999999999998752 99999999999999997 99999999998653221
Q ss_pred ccccccccccccCChhhhh--cCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccch
Q 002647 659 HISTHVMGTFGYLAPEYAM--TGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPV 736 (897)
Q Consensus 659 ~~~t~~~GT~~Y~APE~l~--~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~ 736 (897)
...+...||..|||||++. ...|+.|+||||||++||||+||+.||..... ...... ++...
T Consensus 199 ~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~---~~~~~~-------------v~~~~ 262 (362)
T KOG0192|consen 199 TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP---VQVASA-------------VVVGG 262 (362)
T ss_pred ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH---HHHHHH-------------HHhcC
Confidence 2334478999999999999 56999999999999999999999999975432 111111 11111
Q ss_pred hccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHhhhhh
Q 002647 737 IESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNEFDE 783 (897)
Q Consensus 737 l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~~e~~~ 783 (897)
.+..++..+...+..|+.+||+.||+.||++.||+..|+.+...+..
T Consensus 263 ~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~ 309 (362)
T KOG0192|consen 263 LRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS 309 (362)
T ss_pred CCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence 12223334667788999999999999999999999999988776554
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-44 Score=401.26 Aligned_cols=252 Identities=31% Similarity=0.466 Sum_probs=212.4
Q ss_pred eeeEEeecCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccCCcc
Q 002647 503 TSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSL 582 (897)
Q Consensus 503 ~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~gGSL 582 (897)
.++.||+|.||+||.|.++....||+|.++... ...++|.+|+++|++|+|+|||+|+|+|..++..+||||||+.|+|
T Consensus 210 l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsL 288 (468)
T KOG0197|consen 210 LIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSL 288 (468)
T ss_pred HHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcH
Confidence 458899999999999999977899999998753 3347899999999999999999999999998899999999999999
Q ss_pred ccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCccccc
Q 002647 583 ESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIST 662 (897)
Q Consensus 583 ~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~~~t 662 (897)
.++|+. .....+...+.+.++.|||+||+||++++ +|||||.++||||+++..+||+||||||.. .++......
T Consensus 289 l~yLr~--~~~~~l~~~~Ll~~a~qIaeGM~YLes~~---~IHRDLAARNiLV~~~~~vKIsDFGLAr~~-~d~~Y~~~~ 362 (468)
T KOG0197|consen 289 LDYLRT--REGGLLNLPQLLDFAAQIAEGMAYLESKN---YIHRDLAARNILVDEDLVVKISDFGLARLI-GDDEYTASE 362 (468)
T ss_pred HHHhhh--cCCCccchHHHHHHHHHHHHHHHHHHhCC---ccchhhhhhheeeccCceEEEccccccccc-CCCceeecC
Confidence 999975 23567999999999999999999999888 999999999999999999999999999943 333333444
Q ss_pred ccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccccccchhccCC
Q 002647 663 HVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESNI 741 (897)
Q Consensus 663 ~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~ 741 (897)
...-...|.|||.+..+.++.|||||||||+||||+| |+.||......+..+ .++...+-..
T Consensus 363 ~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~-----------------~le~GyRlp~ 425 (468)
T KOG0197|consen 363 GGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLE-----------------LLERGYRLPR 425 (468)
T ss_pred CCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHH-----------------HHhccCcCCC
Confidence 4455779999999999999999999999999999999 999987543222111 1222222234
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 002647 742 SYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVC 778 (897)
Q Consensus 742 ~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~ 778 (897)
+..+...+.+|+..||+.+|++|||+..+...|+.+.
T Consensus 426 P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~ 462 (468)
T KOG0197|consen 426 PEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFF 462 (468)
T ss_pred CCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhh
Confidence 5567788999999999999999999998877777654
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-43 Score=383.08 Aligned_cols=255 Identities=30% Similarity=0.473 Sum_probs=210.5
Q ss_pred ecHHHHHHhhCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeec-ccccchHHHHHHHHHHhhccCCceeeEeeeeec
Q 002647 489 FTLNDIEKATNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKR-ANQHGGREFLAELEMLSRLHHRNLVKLFGVCIE 566 (897)
Q Consensus 489 f~~~ei~~at~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~-~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~ 566 (897)
.++.|+++ .+.||+|..|+|||+.++ +++.+|+|.+.. .+....+++.+|++++++.+|||||.++|.|..
T Consensus 76 i~~~dle~-------~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~ 148 (364)
T KOG0581|consen 76 ISLSDLER-------LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYS 148 (364)
T ss_pred cCHHHhhh-------hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEe
Confidence 45556554 588999999999999976 688899999954 344556789999999999999999999999999
Q ss_pred CC-ceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhc-cCCCcEEecCCCCCcEEEccCCceEEe
Q 002647 567 DN-NRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHE-DSSPRVIHRDFKSSNILLEHDFTPKVS 644 (897)
Q Consensus 567 ~~-~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~-~gsp~IIHrDIKpsNILLd~~~~vKLs 644 (897)
.. +.+++||||++|||++++.. .+.+++...-+|+.+|++||.|||+ ++ ||||||||+||||+..|+||||
T Consensus 149 ~~~~isI~mEYMDgGSLd~~~k~----~g~i~E~~L~~ia~~VL~GL~YLh~~~~---IIHRDIKPsNlLvNskGeVKic 221 (364)
T KOG0581|consen 149 NGEEISICMEYMDGGSLDDILKR----VGRIPEPVLGKIARAVLRGLSYLHEERK---IIHRDIKPSNLLVNSKGEVKIC 221 (364)
T ss_pred CCceEEeehhhcCCCCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhhccC---eeeccCCHHHeeeccCCCEEec
Confidence 88 49999999999999999953 3679999999999999999999996 54 9999999999999999999999
Q ss_pred ccCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccc
Q 002647 645 DFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLT 724 (897)
Q Consensus 645 DFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~ 724 (897)
|||.++.+.+. ....+.||..|||||.+.+..|+.++||||||+.|+|+++|+.||..... ....|+
T Consensus 222 DFGVS~~lvnS----~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~----~~~~~~----- 288 (364)
T KOG0581|consen 222 DFGVSGILVNS----IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNP----PYLDIF----- 288 (364)
T ss_pred cccccHHhhhh----hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCC----CCCCHH-----
Confidence 99999876543 45678899999999999999999999999999999999999999965311 111121
Q ss_pred ccccccccccchhccCCCH-HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 725 TKEGLKTIIDPVIESNISY-DTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 725 ~~e~l~~iiDp~l~~~~~~-e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
+.+..|++... ...+. ....++..++..||+.||.+||++.|++++
T Consensus 289 --~Ll~~Iv~~pp-P~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 289 --ELLCAIVDEPP-PRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred --HHHHHHhcCCC-CCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 11222233111 11223 356789999999999999999999999765
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-44 Score=418.35 Aligned_cols=263 Identities=27% Similarity=0.472 Sum_probs=222.9
Q ss_pred hCCceeeeEEeecCceEEEEEEec------CCCEEEEEEeeccccc-chHHHHHHHHHHhhccCCceeeEeeeeecCCce
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILD------DGREVAVKVLKRANQH-GGREFLAELEMLSRLHHRNLVKLFGVCIEDNNR 570 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~------~g~~VAVK~lk~~~~~-~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~ 570 (897)
..+....+.||+|+||+||+|... +...||||.++..... ..++|.+|+++|..|+|+|||+|+|+|.+++..
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~ 564 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPL 564 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCee
Confidence 345556789999999999999943 3467999999986665 678999999999999999999999999999999
Q ss_pred EEEEeeccCCccccccccCCC----------CCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCc
Q 002647 571 CLVYELIHNGSLESHLHGDDK----------VNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFT 640 (897)
Q Consensus 571 ~LV~Ey~~gGSL~~~L~~~~~----------~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~ 640 (897)
++|+|||..|+|.++|..... ...+|+..+.+.||.|||.||+||-++. +|||||..+|+||.++..
T Consensus 565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~---FVHRDLATRNCLVge~l~ 641 (774)
T KOG1026|consen 565 CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH---FVHRDLATRNCLVGENLV 641 (774)
T ss_pred EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc---ccccchhhhhceeccceE
Confidence 999999999999999964221 1234899999999999999999999887 999999999999999999
Q ss_pred eEEeccCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhh
Q 002647 641 PKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWA 719 (897)
Q Consensus 641 vKLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~ 719 (897)
|||+||||+|.....++.....+-.-.++||+||.++.++|+.+||||||||+|||++| |+.||.....++....+.
T Consensus 642 VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~-- 719 (774)
T KOG1026|consen 642 VKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIR-- 719 (774)
T ss_pred EEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHH--
Confidence 99999999998776666655555666789999999999999999999999999999999 999997655433332221
Q ss_pred hhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHhh
Q 002647 720 RPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNE 780 (897)
Q Consensus 720 ~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~~e 780 (897)
+..+ -..+.++..++..|+..||+.+|++||+++||-..|+...+.
T Consensus 720 --------------~g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~ 765 (774)
T KOG1026|consen 720 --------------AGQL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA 765 (774)
T ss_pred --------------cCCc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence 1111 224667788999999999999999999999999999876543
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-42 Score=392.94 Aligned_cols=248 Identities=29% Similarity=0.472 Sum_probs=210.1
Q ss_pred CCceeeeEEeecCceEEEEEEe-cCCCEEEEEEeec---ccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKR---ANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~---~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~ 574 (897)
..|...++||+|||+.||.++. ..|+.||+|++.+ ......+.+.+||++.++|+|||||+++++|++.++.|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5688999999999999999996 7899999999965 23445577899999999999999999999999999999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
|+|++|+|..+++ ..++|++.++..++.||+.||.|||+++ |||||||..|+||+++.+|||+|||||..+..
T Consensus 98 ELC~~~sL~el~K----rrk~ltEpEary~l~QIv~GlkYLH~~~---IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~ 170 (592)
T KOG0575|consen 98 ELCHRGSLMELLK----RRKPLTEPEARYFLRQIVEGLKYLHSLG---IIHRDLKLGNLFLNENMNVKIGDFGLATQLEY 170 (592)
T ss_pred EecCCccHHHHHH----hcCCCCcHHHHHHHHHHHHHHHHHHhcC---ceecccchhheeecCcCcEEecccceeeeecC
Confidence 9999999999984 3578999999999999999999999998 99999999999999999999999999987754
Q ss_pred CCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccccccccccc
Q 002647 655 EGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIID 734 (897)
Q Consensus 655 ~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiD 734 (897)
++. ...+.+||+.|+|||++.....+..+||||+|||+|-||+|++||+...-.+..+ .+...+.
T Consensus 171 ~~E--rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~------~Ik~~~Y------- 235 (592)
T KOG0575|consen 171 DGE--RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYN------KIKLNEY------- 235 (592)
T ss_pred ccc--ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHH------HHHhcCc-------
Confidence 433 3356899999999999999999999999999999999999999997532211111 1111100
Q ss_pred chhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 735 PVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 735 p~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
.++.....+..+||..+|+.||.+||++.+|++.
T Consensus 236 -----~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 236 -----SMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred -----ccccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 1122344556789999999999999999999864
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-42 Score=399.32 Aligned_cols=300 Identities=27% Similarity=0.424 Sum_probs=236.5
Q ss_pred hCCceeeeEEeecCceEEEEEEecC----CCEEEEEEeecc-cccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEE
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILDD----GREVAVKVLKRA-NQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCL 572 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~~----g~~VAVK~lk~~-~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~L 572 (897)
.....+.++||.|.||+||+|.++- ...||||.+|.. .+....+|+.|..||.+++||||++|.|+....+..++
T Consensus 628 ~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMI 707 (996)
T KOG0196|consen 628 PSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMI 707 (996)
T ss_pred hhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEE
Confidence 3456788999999999999999762 356999999964 45566899999999999999999999999999999999
Q ss_pred EEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhc
Q 002647 573 VYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTA 652 (897)
Q Consensus 573 V~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~ 652 (897)
|.|||+||+|+.+|+.. .+.+++.+..-++++||.||.||-+.+ +|||||.++|||++.|..+||+||||+|.+
T Consensus 708 iTEyMENGsLDsFLR~~---DGqftviQLVgMLrGIAsGMkYLsdm~---YVHRDLAARNILVNsnLvCKVsDFGLSRvl 781 (996)
T KOG0196|consen 708 ITEYMENGSLDSFLRQN---DGQFTVIQLVGMLRGIASGMKYLSDMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVL 781 (996)
T ss_pred EhhhhhCCcHHHHHhhc---CCceEeehHHHHHHHHHHHhHHHhhcC---chhhhhhhhheeeccceEEEeccccceeec
Confidence 99999999999999754 467999999999999999999999888 999999999999999999999999999966
Q ss_pred ccCCCccccccccc--ccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccc
Q 002647 653 LDEGNKHISTHVMG--TFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGL 729 (897)
Q Consensus 653 ~~~~~~~~~t~~~G--T~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l 729 (897)
.++. ....+...| ..+|.|||.+..+++|.+|||||||||+||.++ |.+||......+..+.
T Consensus 782 edd~-~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIka-------------- 846 (996)
T KOG0196|consen 782 EDDP-EAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKA-------------- 846 (996)
T ss_pred ccCC-CccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHH--------------
Confidence 5443 222223323 469999999999999999999999999999988 9999975544332222
Q ss_pred cccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHhhhhhchhhhcc-----cCCCCCCccccccc
Q 002647 730 KTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNEFDETKETIES-----RDLSEDCSISVDSK 804 (897)
Q Consensus 730 ~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~~e~~~~~e~~~~-----~~ls~~~sis~d~~ 804 (897)
++...+-..+.++...|.+|+..||++|-.+||++.+|+..|.++...-..++..-.. +.+.. ....|..
T Consensus 847 ---Ie~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~SLk~~~~~~~r~s~~lld--~~~~~~~ 921 (996)
T KOG0196|consen 847 ---IEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSLKTIAPESPRPSQPLLD--RSGSDFT 921 (996)
T ss_pred ---HHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchhhcccCCCCCCCcccccC--CCCCCCc
Confidence 1222233357788999999999999999999999999999999987654444332111 00100 0011222
Q ss_pred ccccchhhHHhhhheeccC
Q 002647 805 VNRLSGEFVEALEVCHTRS 823 (897)
Q Consensus 805 ~~~lsg~~~~~~e~~~s~~ 823 (897)
--+..++|.+.+++.+-..
T Consensus 922 ~f~sv~~WL~aIkm~rY~~ 940 (996)
T KOG0196|consen 922 PFRSVGDWLEAIKMGRYKE 940 (996)
T ss_pred ccCCHHHHHHHhhhhHHHH
Confidence 2233488999888765443
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-42 Score=375.22 Aligned_cols=201 Identities=34% Similarity=0.548 Sum_probs=180.4
Q ss_pred hCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecc--cccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEE
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRA--NQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~--~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~ 574 (897)
..+|...+.||+|+||+||+|+++ ++..||||.+... .....+.+..|+++|+.|+|+|||.|++++..++..||||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 467888899999999999999965 6899999999765 4445567889999999999999999999999999999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccC------CceEEeccCc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHD------FTPKVSDFGL 648 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~------~~vKLsDFGL 648 (897)
|||.||+|.+||+. .+.+++..+..++.|||.||++||+++ ||||||||.||||+.+ -.+||+|||+
T Consensus 89 EyC~gGDLs~yi~~----~~~l~e~t~r~Fm~QLA~alq~L~~~~---IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGf 161 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRR----RGRLPEATARHFMQQLASALQFLHENN---IIHRDLKPQNILLSTTARNDTSPVLKIADFGF 161 (429)
T ss_pred EeCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCcceEEeccCCCCCCCceEEecccch
Confidence 99999999999964 347999999999999999999999998 9999999999999764 4689999999
Q ss_pred chhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCC
Q 002647 649 ARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQ 708 (897)
Q Consensus 649 Ar~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~ 708 (897)
||.+.+ .....+.+|++-|||||+++.++|+.|+|+||+|+|||+|++|+.||+...
T Consensus 162 AR~L~~---~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t 218 (429)
T KOG0595|consen 162 ARFLQP---GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAET 218 (429)
T ss_pred hhhCCc---hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccC
Confidence 998743 334557899999999999999999999999999999999999999998543
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=416.72 Aligned_cols=269 Identities=30% Similarity=0.537 Sum_probs=217.5
Q ss_pred ecHHHHHHhhCCceeeeEEeecCceEEEEEEe-cCCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecC
Q 002647 489 FTLNDIEKATNGFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIED 567 (897)
Q Consensus 489 f~~~ei~~at~~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~ 567 (897)
+.++++. ..|...++||+|+||.||+|+. .+|..||||+++..... ..+|++++++++|||||+++|+|.++
T Consensus 683 ~~~~~~~---~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~ 755 (968)
T PLN00113 683 ITINDIL---SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSE 755 (968)
T ss_pred hhHHHHH---hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcC
Confidence 3444443 4566778999999999999996 57899999998754322 23568899999999999999999999
Q ss_pred CceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccC
Q 002647 568 NNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFG 647 (897)
Q Consensus 568 ~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFG 647 (897)
+..++||||+++|+|.++++ .++|.++.+|+.|+|+||+|||..++++|+||||||+||+++.++..++. ||
T Consensus 756 ~~~~lv~Ey~~~g~L~~~l~-------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~ 827 (968)
T PLN00113 756 KGAYLIHEYIEGKNLSEVLR-------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LS 827 (968)
T ss_pred CCCEEEEeCCCCCcHHHHHh-------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ec
Confidence 99999999999999999994 38999999999999999999997766679999999999999999888875 66
Q ss_pred cchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccc
Q 002647 648 LARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKE 727 (897)
Q Consensus 648 LAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e 727 (897)
....... .....+|..|+|||++.+..++.|+|||||||++|||+||+.||+.... ....++.|.+..... .
T Consensus 828 ~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~-~ 899 (968)
T PLN00113 828 LPGLLCT------DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFG-VHGSIVEWARYCYSD-C 899 (968)
T ss_pred ccccccc------CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccC-CCCcHHHHHHHhcCc-c
Confidence 5543211 1223678999999999999999999999999999999999999964332 334567777654432 2
Q ss_pred cccccccchhccC--CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHhh
Q 002647 728 GLKTIIDPVIESN--ISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNE 780 (897)
Q Consensus 728 ~l~~iiDp~l~~~--~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~~e 780 (897)
....++|+.+... ...++..++.+++.+||+.||++||+|.||++.|+.+.+.
T Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~ 954 (968)
T PLN00113 900 HLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRS 954 (968)
T ss_pred chhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcc
Confidence 3455666665432 3456777899999999999999999999999999877543
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-42 Score=372.57 Aligned_cols=252 Identities=25% Similarity=0.382 Sum_probs=203.5
Q ss_pred hhCCceeeeEEeecCceEEEEEEe-cCCCEEEEEEeeccccc-------chHHHHHHHHHHhhccCCceeeEeeeeecCC
Q 002647 497 ATNGFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRANQH-------GGREFLAELEMLSRLHHRNLVKLFGVCIEDN 568 (897)
Q Consensus 497 at~~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~~~~-------~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~ 568 (897)
..+.|.+.+.||+|+||.|-+|.. ++|+.||||++.+.... ......+|+++|++|+|||||+++++|.+.+
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 346688899999999999999994 57999999999753211 1234579999999999999999999999999
Q ss_pred ceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccC---CceEEec
Q 002647 569 NRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHD---FTPKVSD 645 (897)
Q Consensus 569 ~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~---~~vKLsD 645 (897)
..|+||||++||+|.+.+-. ++.+.+.....++.|++.|+.|||+.| |+||||||+|||+..+ ..+||+|
T Consensus 250 s~YmVlE~v~GGeLfd~vv~----nk~l~ed~~K~~f~Qll~avkYLH~~G---I~HRDiKPeNILl~~~~e~~llKItD 322 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVA----NKYLREDLGKLLFKQLLTAVKYLHSQG---IIHRDIKPENILLSNDAEDCLLKITD 322 (475)
T ss_pred ceEEEEEEecCccHHHHHHh----ccccccchhHHHHHHHHHHHHHHHHcC---cccccCCcceEEeccCCcceEEEecc
Confidence 99999999999999999953 456888888999999999999999998 9999999999999755 7899999
Q ss_pred cCcchhcccCCCcccccccccccccCChhhhhcCCC---CccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhc
Q 002647 646 FGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHL---LVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPL 722 (897)
Q Consensus 646 FGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~---t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l 722 (897)
||+|+... ....+.+.+||+.|.|||++.+... ..|.|+||+|||||-+|+|..||.....+. .+.+
T Consensus 323 FGlAK~~g---~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~--sl~e----- 392 (475)
T KOG0615|consen 323 FGLAKVSG---EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP--SLKE----- 392 (475)
T ss_pred cchhhccc---cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc--cHHH-----
Confidence 99999763 3445667899999999999986643 348899999999999999999996433221 0100
Q ss_pred ccccccccccccchhc--cCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 723 LTTKEGLKTIIDPVIE--SNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 723 ~~~~e~l~~iiDp~l~--~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
.+...+.. .....+..++.+++|.+||..||++||++.|+++.
T Consensus 393 --------QI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 393 --------QILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred --------HHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 01110100 01123445678899999999999999999999864
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-43 Score=367.19 Aligned_cols=258 Identities=26% Similarity=0.404 Sum_probs=210.3
Q ss_pred CceeeeEEeecCceEEEEEE-ecCCCEEEEEEeec--ccccchHHHHHHHHHHhhccCCceeeEee-eeecCCc-eEEEE
Q 002647 500 GFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKR--ANQHGGREFLAELEMLSRLHHRNLVKLFG-VCIEDNN-RCLVY 574 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~-l~~g~~VAVK~lk~--~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg-~~~~~~~-~~LV~ 574 (897)
+|++.++||+|.||+|||+. +.+|..||.|.++- .+....++..+|+.+|++|+|||||++++ -+.++++ .+|||
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm 99 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM 99 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence 46778999999999999999 56899999999873 33445578999999999999999999999 4555555 79999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccC-CCcEEecCCCCCcEEEccCCceEEeccCcchhcc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDS-SPRVIHRDFKSSNILLEHDFTPKVSDFGLARTAL 653 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~g-sp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~ 653 (897)
|||.+|+|...|+..++....+++..+++++.|+++||..+|..- ...|+||||||.||+|+.+|.|||+||||++.+.
T Consensus 100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~ 179 (375)
T KOG0591|consen 100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLS 179 (375)
T ss_pred HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhc
Confidence 999999999999877777788999999999999999999999731 1239999999999999999999999999999874
Q ss_pred cCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccc
Q 002647 654 DEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTII 733 (897)
Q Consensus 654 ~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~ii 733 (897)
. ........+||++||+||.+....|+.||||||+||++|||+.-+.||.+. ++...-+.+- ..+ .
T Consensus 180 s--~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~------n~~~L~~KI~-qgd-~---- 245 (375)
T KOG0591|consen 180 S--KTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD------NLLSLCKKIE-QGD-Y---- 245 (375)
T ss_pred c--hhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc------cHHHHHHHHH-cCC-C----
Confidence 3 333445689999999999999999999999999999999999999999753 3322221111 110 0
Q ss_pred cchhccCCC-HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002647 734 DPVIESNIS-YDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKL 776 (897)
Q Consensus 734 Dp~l~~~~~-~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~ 776 (897)
..++ ......+..||..|+..|++.||+.-.++..++.
T Consensus 246 -----~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 246 -----PPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred -----CCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 0112 3445678899999999999999997666655543
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-41 Score=371.15 Aligned_cols=263 Identities=26% Similarity=0.437 Sum_probs=205.4
Q ss_pred hCCceeeeEEeecCceEEEEEEe------cCCCEEEEEEeecccc-cchHHHHHHHHHHhhc-cCCceeeEeeeeecCC-
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGIL------DDGREVAVKVLKRANQ-HGGREFLAELEMLSRL-HHRNLVKLFGVCIEDN- 568 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l------~~g~~VAVK~lk~~~~-~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~~- 568 (897)
.++|++.++||+|+||.||+|.. .++..||||+++.... ...+.+.+|+++|.++ +|+||++++++|...+
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 46788999999999999999974 2356799999975332 2345789999999999 8999999999987654
Q ss_pred ceEEEEeeccCCccccccccCCC---------------------------------------------------------
Q 002647 569 NRCLVYELIHNGSLESHLHGDDK--------------------------------------------------------- 591 (897)
Q Consensus 569 ~~~LV~Ey~~gGSL~~~L~~~~~--------------------------------------------------------- 591 (897)
..++||||+++|+|.++|.....
T Consensus 86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD 165 (338)
T ss_pred ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence 57899999999999999864221
Q ss_pred -CCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCccccccccccccc
Q 002647 592 -VNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGY 670 (897)
Q Consensus 592 -~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~~~t~~~GT~~Y 670 (897)
....+++.++++++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++...............++..|
T Consensus 166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y 242 (338)
T cd05102 166 LWKSPLTMEDLICYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKW 242 (338)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccc
Confidence 0235889999999999999999999887 999999999999999999999999999865332222222334567889
Q ss_pred CChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccccccchhccCCCHHHHHHH
Q 002647 671 LAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKV 749 (897)
Q Consensus 671 ~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L 749 (897)
+|||++.+..++.++|||||||+||||++ |..||...... ..+.. .+. .... . ..+......+
T Consensus 243 ~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~--~~~~~---~~~-~~~~------~----~~~~~~~~~l 306 (338)
T cd05102 243 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN--EEFCQ---RLK-DGTR------M----RAPENATPEI 306 (338)
T ss_pred cCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCcc--HHHHH---HHh-cCCC------C----CCCCCCCHHH
Confidence 99999999999999999999999999997 99999753321 11111 110 0000 0 0112233567
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHHHHHHHh
Q 002647 750 AAIASMCVQPEVSHRPFMGEVVQALKLVCN 779 (897)
Q Consensus 750 ~~Li~~CL~~dP~~RPTm~EVl~~L~~l~~ 779 (897)
.+|+.+||+.||++||++.||++.|+.+..
T Consensus 307 ~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 307 YRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 899999999999999999999999997754
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-40 Score=359.12 Aligned_cols=242 Identities=28% Similarity=0.405 Sum_probs=202.0
Q ss_pred hCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEE
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLV 573 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV 573 (897)
.++|++.++||+|+||+||.++.+ +++.+|+|++++.. ....+..++|..+|.+++||.||+++..|++.+.+|||
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 467999999999999999999954 68899999997633 23456788999999999999999999999999999999
Q ss_pred EeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcc
Q 002647 574 YELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTAL 653 (897)
Q Consensus 574 ~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~ 653 (897)
+||+.||.|..+|. .++.+++..+.-++..|+.||.|||+.+ ||||||||+|||||++|+++|+||||++...
T Consensus 104 ld~~~GGeLf~hL~----~eg~F~E~~arfYlaEi~lAL~~LH~~g---IiyRDlKPENILLd~~GHi~LtDFgL~k~~~ 176 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQ----REGRFSEDRARFYLAEIVLALGYLHSKG---IIYRDLKPENILLDEQGHIKLTDFGLCKEDL 176 (357)
T ss_pred EeccCCccHHHHHH----hcCCcchhHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHeeecCCCcEEEeccccchhcc
Confidence 99999999999994 3567999999999999999999999998 9999999999999999999999999999654
Q ss_pred cCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccc
Q 002647 654 DEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTII 733 (897)
Q Consensus 654 ~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~ii 733 (897)
..+ ..+..++||+.|||||++.+..|+..+|.||+|+++|||++|..||...+ ...+...+...+
T Consensus 177 ~~~--~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~------~~~~~~~I~~~k------- 241 (357)
T KOG0598|consen 177 KDG--DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAED------VKKMYDKILKGK------- 241 (357)
T ss_pred cCC--CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCcc------HHHHHHHHhcCc-------
Confidence 433 23445899999999999999999999999999999999999999997533 222222222211
Q ss_pred cchhccCCCHHHHHHHHHHHHHccCCCCCCCC
Q 002647 734 DPVIESNISYDTLVKVAAIASMCVQPEVSHRP 765 (897)
Q Consensus 734 Dp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RP 765 (897)
+ ...+.-...+..+++...+..||++|-
T Consensus 242 ---~-~~~p~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 242 ---L-PLPPGYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred ---C-CCCCccCCHHHHHHHHHHhccCHHHhc
Confidence 0 011111234567899999999999995
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=350.17 Aligned_cols=260 Identities=22% Similarity=0.382 Sum_probs=205.9
Q ss_pred cceecHHHHHHhhCCceeeeEEeecCceEEEEEEecCCCEEEEEEeecccccc---hHHHHHHHHHHhhccCCceeeEee
Q 002647 486 AKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHG---GREFLAELEMLSRLHHRNLVKLFG 562 (897)
Q Consensus 486 ~k~f~~~ei~~at~~y~~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~---~~~f~~Ev~iL~~L~HpNIV~Llg 562 (897)
.+.++.++++. .....||+|++|.||+|.+ +|+.||||+++...... .+.|.+|+++|++++|+||++++|
T Consensus 12 ~~~i~~~~i~~-----~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g 85 (283)
T PHA02988 12 IKCIESDDIDK-----YTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYG 85 (283)
T ss_pred ceecCHHHcCC-----CCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEee
Confidence 44556666632 2236799999999999998 48999999997644333 467889999999999999999999
Q ss_pred eeec----CCceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhcc-CCCcEEecCCCCCcEEEcc
Q 002647 563 VCIE----DNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHED-SSPRVIHRDFKSSNILLEH 637 (897)
Q Consensus 563 ~~~~----~~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~-gsp~IIHrDIKpsNILLd~ 637 (897)
++.+ ....++||||+++|+|.+++.. ...+++..+++++.|++.||.|||+. + ++||||||+|||+++
T Consensus 86 ~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~~---~~Hrdlkp~nill~~ 158 (283)
T PHA02988 86 FIIDIVDDLPRLSLILEYCTRGYLREVLDK----EKDLSFKTKLDMAIDCCKGLYNLYKYTN---KPYKNLTSVSFLVTE 158 (283)
T ss_pred eEEecccCCCceEEEEEeCCCCcHHHHHhh----CCCCChhHHHHHHHHHHHHHHHHHhcCC---CCCCcCChhhEEECC
Confidence 9876 3467899999999999999963 34689999999999999999999974 5 789999999999999
Q ss_pred CCceEEeccCcchhcccCCCcccccccccccccCChhhhhc--CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhh
Q 002647 638 DFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMT--GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENL 715 (897)
Q Consensus 638 ~~~vKLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~--~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~l 715 (897)
++.+||+|||+++...... ....|+..|+|||++.+ ..++.++|||||||++|||++|+.||+..... .+
T Consensus 159 ~~~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~---~~ 230 (283)
T PHA02988 159 NYKLKIICHGLEKILSSPP-----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK---EI 230 (283)
T ss_pred CCcEEEcccchHhhhcccc-----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH---HH
Confidence 9999999999998643211 23457899999999876 68899999999999999999999999754321 11
Q ss_pred HHhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHh
Q 002647 716 VAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCN 779 (897)
Q Consensus 716 v~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~~ 779 (897)
... ...... ....+......+.+|+.+||+.||++||++.||++.|+.+..
T Consensus 231 ~~~---i~~~~~----------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 231 YDL---IINKNN----------SLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred HHH---HHhcCC----------CCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 111 110000 011222345578899999999999999999999999987753
|
|
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-39 Score=348.23 Aligned_cols=264 Identities=25% Similarity=0.434 Sum_probs=203.2
Q ss_pred CCceeeeEEeecCceEEEEEEecC-----------------CCEEEEEEeeccc-ccchHHHHHHHHHHhhccCCceeeE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILDD-----------------GREVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKL 560 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~~-----------------g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~HpNIV~L 560 (897)
++|.+.++||+|+||.||+|.+++ +..||+|.+.... .....+|.+|+++|.+++|+||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 578889999999999999998532 3369999987543 2334579999999999999999999
Q ss_pred eeeeecCCceEEEEeeccCCccccccccCCC---------------CCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEe
Q 002647 561 FGVCIEDNNRCLVYELIHNGSLESHLHGDDK---------------VNGPLDWDARMKIALGAARGLAYLHEDSSPRVIH 625 (897)
Q Consensus 561 lg~~~~~~~~~LV~Ey~~gGSL~~~L~~~~~---------------~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIH 625 (897)
++++.+.+..++||||+++|+|.+++..... ....+++.++++++.||+.||+|||+.+ |+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN---FVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC---ccc
Confidence 9999999999999999999999998854211 1135788999999999999999999988 999
Q ss_pred cCCCCCcEEEccCCceEEeccCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh--CCCC
Q 002647 626 RDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT--GRKP 703 (897)
Q Consensus 626 rDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT--Gk~P 703 (897)
|||||+|||+++++.+||+|||+++...............++..|+|||++..+.++.++||||||+++|||++ +..|
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p 241 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQP 241 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCC
Confidence 99999999999999999999999986543322223334456789999999998899999999999999999987 5566
Q ss_pred CCCCCCCCchhhHHhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 002647 704 VDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775 (897)
Q Consensus 704 fd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~ 775 (897)
|..... .....+.............. ..+..+...+.+|+.+||+.||++||++.||++.|+
T Consensus 242 ~~~~~~---~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 242 YGELTD---EQVIENAGEFFRDQGRQVYL-------FRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCcCCH---HHHHHHHHHHhhhccccccc-------cCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 654322 12222221111111000000 011223456889999999999999999999988875
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=394.17 Aligned_cols=264 Identities=28% Similarity=0.449 Sum_probs=217.3
Q ss_pred hCCceeeeEEeecCceEEEEEEecC--CC----EEEEEEeecc-cccchHHHHHHHHHHhhccCCceeeEeeeeecCCce
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILDD--GR----EVAVKVLKRA-NQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNR 570 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~~--g~----~VAVK~lk~~-~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~ 570 (897)
..+.+..+.||+|+||.||.|...+ |. .||||.+++. +.+...+|++|..+|+.++|||||+++|+|.+....
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~ 770 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP 770 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence 3456678999999999999999653 43 3899999764 445567899999999999999999999999999999
Q ss_pred EEEEeeccCCccccccccCCC---CCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccC
Q 002647 571 CLVYELIHNGSLESHLHGDDK---VNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFG 647 (897)
Q Consensus 571 ~LV~Ey~~gGSL~~~L~~~~~---~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFG 647 (897)
++++|||++|+|..+|++.+. ....|+..+.+.|+.|||+|+.||++.+ +|||||.++|+||++...|||+|||
T Consensus 771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~---fvHRDLAaRNCLL~~~r~VKIaDFG 847 (1025)
T KOG1095|consen 771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH---FVHRDLAARNCLLDERRVVKIADFG 847 (1025)
T ss_pred EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC---CcCcchhhhheeecccCcEEEcccc
Confidence 999999999999999976532 1346999999999999999999999887 9999999999999999999999999
Q ss_pred cchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhccccc
Q 002647 648 LARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTK 726 (897)
Q Consensus 648 LAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~ 726 (897)
+|+.+.............-...|||||.++++.++.|+|||||||+|||++| |..||......+.... |.. .
T Consensus 848 lArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~--~~~-----g 920 (1025)
T KOG1095|consen 848 LARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLD--VLE-----G 920 (1025)
T ss_pred hhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHH--HHh-----C
Confidence 9997655554444434345679999999999999999999999999999999 9999975443222111 111 1
Q ss_pred ccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHhhh
Q 002647 727 EGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNEF 781 (897)
Q Consensus 727 e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~~e~ 781 (897)
.+ -+.+..+...+.+|+..||+.+|++||++..|++.+..+.+..
T Consensus 921 gR----------L~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~ 965 (1025)
T KOG1095|consen 921 GR----------LDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAA 965 (1025)
T ss_pred Cc----------cCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence 11 1235566778889999999999999999999999887776543
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-39 Score=362.06 Aligned_cols=265 Identities=26% Similarity=0.453 Sum_probs=218.2
Q ss_pred hCCceeeeEEeecCceEEEEEEecCCCEEEEEEeecccccc-hHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHG-GREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~-~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
.....+.++||+|-||+|.++....+..||||.++...... .++|.+|+++|.+|+|||||+|+|+|..++..++|+||
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EY 616 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEY 616 (807)
T ss_pred hhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHH
Confidence 34556789999999999999999988999999999755444 48999999999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
|++|+|.++|...... .+.-....+|+.|||.||+||.+.+ +|||||.++|||+|.++++||+|||++|.+...+
T Consensus 617 mEnGDLnqFl~aheap--t~~t~~~vsi~tqiasgmaYLes~n---fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~ 691 (807)
T KOG1094|consen 617 MENGDLNQFLSAHELP--TAETAPGVSICTQIASGMAYLESLN---FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGD 691 (807)
T ss_pred HhcCcHHHHHHhccCc--ccccchhHHHHHHHHHHHHHHHhhc---hhhccccccceeecCcccEEecCcccccccccCC
Confidence 9999999999654221 2456677889999999999999877 9999999999999999999999999999877766
Q ss_pred CcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh--CCCCCCCCCCCCchhhHHhhhhccccccccccccc
Q 002647 657 NKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT--GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIID 734 (897)
Q Consensus 657 ~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT--Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiD 734 (897)
..+...+..-..+|||+|.+..++++.+||||+||+.|||+++ ...||..... +..++....++.... ....+
T Consensus 692 yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~---e~vven~~~~~~~~~-~~~~l- 766 (807)
T KOG1094|consen 692 YYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTD---EQVVENAGEFFRDQG-RQVVL- 766 (807)
T ss_pred ceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhH---HHHHHhhhhhcCCCC-cceec-
Confidence 6666667778899999999999999999999999999999975 7788854322 233333333332211 11111
Q ss_pred chhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 002647 735 PVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLV 777 (897)
Q Consensus 735 p~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l 777 (897)
..+.-+..++.+++.+||..|-++||+++++...|+..
T Consensus 767 -----~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 767 -----SRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred -----cCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 12344567788999999999999999999999988754
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=369.03 Aligned_cols=267 Identities=28% Similarity=0.475 Sum_probs=211.0
Q ss_pred HHHHHhhCCceeeeEEeecCceEEEEEEecCCCEEEEEEeecccc--cchHHHHHHHHHHhhccCCceeeEeeeeecCCc
Q 002647 492 NDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQ--HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNN 569 (897)
Q Consensus 492 ~ei~~at~~y~~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~--~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~ 569 (897)
++.+...+.+.+.+.||+|.||+||+|.+- .+||||+++.... +..+.|++||.+|++-+|.||+-++|+|.+...
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~ 462 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL 462 (678)
T ss_pred cccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce
Confidence 444445566678899999999999999985 4699999986443 355789999999999999999999999998776
Q ss_pred eEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcc
Q 002647 570 RCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLA 649 (897)
Q Consensus 570 ~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLA 649 (897)
.+|+.+|+|.+|+.+||.. +..++..+.++||.|||+||.|||.++ |||||||..||||.+++.|||+||||+
T Consensus 463 -AIiTqwCeGsSLY~hlHv~---etkfdm~~~idIAqQiaqGM~YLHAK~---IIHrDLKSnNIFl~~~~kVkIgDFGLa 535 (678)
T KOG0193|consen 463 -AIITQWCEGSSLYTHLHVQ---ETKFDMNTTIDIAQQIAQGMDYLHAKN---IIHRDLKSNNIFLHEDLKVKIGDFGLA 535 (678)
T ss_pred -eeeehhccCchhhhhccch---hhhhhHHHHHHHHHHHHHhhhhhhhhh---hhhhhccccceEEccCCcEEEecccce
Confidence 9999999999999999854 356999999999999999999999998 999999999999999999999999998
Q ss_pred hhcccCCCcccccccccccccCChhhhhc---CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccc
Q 002647 650 RTALDEGNKHISTHVMGTFGYLAPEYAMT---GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTK 726 (897)
Q Consensus 650 r~~~~~~~~~~~t~~~GT~~Y~APE~l~~---~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~ 726 (897)
..-..-..........|...|||||++.. .+|++.+||||||+|+|||+||..||.. +..+ -+-|+ ...+
T Consensus 536 tvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi-~~~d---qIifm---VGrG 608 (678)
T KOG0193|consen 536 TVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSI-QNRD---QIIFM---VGRG 608 (678)
T ss_pred eeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCC-CChh---heEEE---eccc
Confidence 64222112222233457889999999874 4789999999999999999999999972 2211 11111 1111
Q ss_pred ccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHhh
Q 002647 727 EGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNE 780 (897)
Q Consensus 727 e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~~e 780 (897)
....+.. ....++..++.+|+..||..++++||.+.+|+..|+.+...
T Consensus 609 ~l~pd~s------~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 609 YLMPDLS------KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS 656 (678)
T ss_pred ccCccch------hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence 1111111 12335566788999999999999999999999988876553
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-39 Score=351.64 Aligned_cols=281 Identities=28% Similarity=0.405 Sum_probs=215.2
Q ss_pred CCcceecHHHHHHhhCCceeeeEEeecCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhh--ccCCceeeEe
Q 002647 484 GTAKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSR--LHHRNLVKLF 561 (897)
Q Consensus 484 ~~~k~f~~~ei~~at~~y~~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~--L~HpNIV~Ll 561 (897)
+++....+--.+....+..+.+.||+|.||+||+|.+. |+.||||++...++ +.+.+|.++++. |+|+||+.++
T Consensus 196 GSGSGlplLVQRTiarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srdE---~SWfrEtEIYqTvmLRHENILgFI 271 (513)
T KOG2052|consen 196 GSGSGLPLLVQRTIARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRDE---RSWFRETEIYQTVMLRHENILGFI 271 (513)
T ss_pred CCCCCchhHhHHhhhheeEEEEEecCccccceeecccc-CCceEEEEecccch---hhhhhHHHHHHHHHhccchhhhhh
Confidence 33445566666778889999999999999999999998 89999999976544 678899999887 5999999999
Q ss_pred eeeecCC----ceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhcc-----CCCcEEecCCCCCc
Q 002647 562 GVCIEDN----NRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHED-----SSPRVIHRDFKSSN 632 (897)
Q Consensus 562 g~~~~~~----~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~-----gsp~IIHrDIKpsN 632 (897)
+.-..++ +++||.+|.++|||+|||. ...++.+..++++..+|.||++||.+ |.|.|.|||||++|
T Consensus 272 aaD~~~~gs~TQLwLvTdYHe~GSL~DyL~-----r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKN 346 (513)
T KOG2052|consen 272 AADNKDNGSWTQLWLVTDYHEHGSLYDYLN-----RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKN 346 (513)
T ss_pred hccccCCCceEEEEEeeecccCCcHHHHHh-----hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhcccccccc
Confidence 9876553 6799999999999999995 25699999999999999999999954 78999999999999
Q ss_pred EEEccCCceEEeccCcchhcccCCCc--ccccccccccccCChhhhhcC----CC--CccccEEechhHHHHHHhC----
Q 002647 633 ILLEHDFTPKVSDFGLARTALDEGNK--HISTHVMGTFGYLAPEYAMTG----HL--LVKSDVYSYGVVLLELLTG---- 700 (897)
Q Consensus 633 ILLd~~~~vKLsDFGLAr~~~~~~~~--~~~t~~~GT~~Y~APE~l~~~----~~--t~kSDVwSfGvIL~ELlTG---- 700 (897)
||+..|+.+.|+|+|||.......+. ......+||.+|||||++... .+ ...+||||||+|+||++-.
T Consensus 347 ILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~g 426 (513)
T KOG2052|consen 347 ILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESG 426 (513)
T ss_pred EEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcC
Confidence 99999999999999999865443221 123456899999999998653 22 2468999999999999862
Q ss_pred ------CCCCCCCCCCCchhhHHhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002647 701 ------RKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL 774 (897)
Q Consensus 701 ------k~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L 774 (897)
+.||....+.+.. . +.++..+. .+.++..++... .+.+.+..+.+|++.||..||..|-|+--|-+.|
T Consensus 427 gi~eey~~Pyyd~Vp~DPs-~-eeMrkVVC-v~~~RP~ipnrW---~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl 500 (513)
T KOG2052|consen 427 GIVEEYQLPYYDVVPSDPS-F-EEMRKVVC-VQKLRPNIPNRW---KSDPALRVMAKLMKECWYANPAARLTALRIKKTL 500 (513)
T ss_pred CEehhhcCCcccCCCCCCC-H-HHHhccee-ecccCCCCCccc---ccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHH
Confidence 2355432221110 0 00111111 112222222111 2457788899999999999999999999998888
Q ss_pred HHHHh
Q 002647 775 KLVCN 779 (897)
Q Consensus 775 ~~l~~ 779 (897)
.++.+
T Consensus 501 ~~l~~ 505 (513)
T KOG2052|consen 501 AKLSN 505 (513)
T ss_pred HHHhc
Confidence 87754
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=364.23 Aligned_cols=248 Identities=27% Similarity=0.493 Sum_probs=208.1
Q ss_pred eecHHHHHHhhCCceeeeEEeecCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecC
Q 002647 488 TFTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIED 567 (897)
Q Consensus 488 ~f~~~ei~~at~~y~~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~ 567 (897)
...+++|. .++-||.|+.|.||+|++. ++.||||+++...+ .+|+-|++|+|+||+.+.|+|...
T Consensus 120 eiPFe~Is-------ELeWlGSGaQGAVF~Grl~-netVAVKKV~elkE-------TdIKHLRkLkH~NII~FkGVCtqs 184 (904)
T KOG4721|consen 120 EIPFEEIS-------ELEWLGSGAQGAVFLGRLH-NETVAVKKVRELKE-------TDIKHLRKLKHPNIITFKGVCTQS 184 (904)
T ss_pred cCCHHHhh-------hhhhhccCcccceeeeecc-CceehhHHHhhhhh-------hhHHHHHhccCcceeeEeeeecCC
Confidence 44555554 3478999999999999998 78999999874432 478899999999999999999999
Q ss_pred CceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccC
Q 002647 568 NNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFG 647 (897)
Q Consensus 568 ~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFG 647 (897)
..+|||||||..|-|...|+. ..+++......|..+||.||.|||.+. |||||||+-||||..+..|||+|||
T Consensus 185 PcyCIiMEfCa~GqL~~VLka----~~~itp~llv~Wsk~IA~GM~YLH~hK---IIHRDLKSPNiLIs~~d~VKIsDFG 257 (904)
T KOG4721|consen 185 PCYCIIMEFCAQGQLYEVLKA----GRPITPSLLVDWSKGIAGGMNYLHLHK---IIHRDLKSPNILISYDDVVKISDFG 257 (904)
T ss_pred ceeEEeeeccccccHHHHHhc----cCccCHHHHHHHHHHhhhhhHHHHHhh---HhhhccCCCceEeeccceEEecccc
Confidence 999999999999999999953 457888999999999999999999887 9999999999999999999999999
Q ss_pred cchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccc
Q 002647 648 LARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKE 727 (897)
Q Consensus 648 LAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e 727 (897)
-++...+. .....++||..|||||++.+.+.++|.|||||||||||||||..||..-+. ..+.|- .+
T Consensus 258 TS~e~~~~---STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVds----sAIIwG-----VG- 324 (904)
T KOG4721|consen 258 TSKELSDK---STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDS----SAIIWG-----VG- 324 (904)
T ss_pred chHhhhhh---hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccch----heeEEe-----cc-
Confidence 99875432 334468999999999999999999999999999999999999999964322 112221 11
Q ss_pred cccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002647 728 GLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKL 776 (897)
Q Consensus 728 ~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~ 776 (897)
...+.-..+..+...+.-|+++||+..|..||++++|+..|+.
T Consensus 325 ------sNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldI 367 (904)
T KOG4721|consen 325 ------SNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDI 367 (904)
T ss_pred ------CCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhh
Confidence 1122233456677788899999999999999999999999863
|
|
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-39 Score=361.63 Aligned_cols=260 Identities=27% Similarity=0.431 Sum_probs=203.7
Q ss_pred hCCceeeeEEeecCceEEEEEEe------cCCCEEEEEEeeccc-ccchHHHHHHHHHHhhc-cCCceeeEeeeeecCCc
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGIL------DDGREVAVKVLKRAN-QHGGREFLAELEMLSRL-HHRNLVKLFGVCIEDNN 569 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l------~~g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~~~ 569 (897)
.++|++.++||+|+||+||+|+. +++..||||+++... ....+.+.+|+++|..+ +|+||++++++|.+.+.
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 34688889999999999999973 245689999997533 23345788999999999 89999999999999999
Q ss_pred eEEEEeeccCCccccccccCCC----------------------------------------------------------
Q 002647 570 RCLVYELIHNGSLESHLHGDDK---------------------------------------------------------- 591 (897)
Q Consensus 570 ~~LV~Ey~~gGSL~~~L~~~~~---------------------------------------------------------- 591 (897)
.++||||+++|+|.++++....
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 9999999999999998864211
Q ss_pred -------------CCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCc
Q 002647 592 -------------VNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNK 658 (897)
Q Consensus 592 -------------~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~ 658 (897)
....+++..+++++.||++||+|||+.+ |+||||||+|||+++++.+||+|||+++........
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 1125889999999999999999999887 999999999999999999999999999865433222
Q ss_pred ccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccccccchh
Q 002647 659 HISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVI 737 (897)
Q Consensus 659 ~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l 737 (897)
.......++..|+|||++.+..++.++|||||||++|||++ |..||...... ..+..+... ....
T Consensus 271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~--~~~~~~~~~------~~~~------ 336 (375)
T cd05104 271 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD--SKFYKMIKE------GYRM------ 336 (375)
T ss_pred cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch--HHHHHHHHh------CccC------
Confidence 22223345678999999999999999999999999999998 88888643221 122221110 0000
Q ss_pred ccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002647 738 ESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKL 776 (897)
Q Consensus 738 ~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~ 776 (897)
..+.....++.+|+.+||+.||++||++.||++.|++
T Consensus 337 --~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 337 --LSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred --CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 0011123467899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=365.50 Aligned_cols=249 Identities=25% Similarity=0.387 Sum_probs=209.7
Q ss_pred CceeeeEEeecCceEEEEEE-ecCCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeecc
Q 002647 500 GFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIH 578 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~-l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~ 578 (897)
.|...++||+|+.|.||.|. ..+++.||||++....+...+-+++|+.+|+.++|+|||++++.|..+++.++|||||+
T Consensus 274 ~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ 353 (550)
T KOG0578|consen 274 KYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYME 353 (550)
T ss_pred hhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecC
Confidence 45666799999999999999 45789999999988777777788999999999999999999999999999999999999
Q ss_pred CCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCc
Q 002647 579 NGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNK 658 (897)
Q Consensus 579 gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~ 658 (897)
+|+|.|.+.. ..+++.++..|+.+++.||+|||..+ |||||||.+|||++.+|.+||+|||++..+.....
T Consensus 354 ggsLTDvVt~-----~~~~E~qIA~Icre~l~aL~fLH~~g---IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~- 424 (550)
T KOG0578|consen 354 GGSLTDVVTK-----TRMTEGQIAAICREILQGLKFLHARG---IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS- 424 (550)
T ss_pred CCchhhhhhc-----ccccHHHHHHHHHHHHHHHHHHHhcc---eeeeccccceeEeccCCcEEEeeeeeeeccccccC-
Confidence 9999999853 34999999999999999999999998 99999999999999999999999999987755433
Q ss_pred ccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhc
Q 002647 659 HISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIE 738 (897)
Q Consensus 659 ~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~ 738 (897)
......||++|||||++....|..|.||||||++++||+-|.+||-...+-... +. +. ..+..+ +
T Consensus 425 -KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAl------yL-Ia-~ng~P~-----l- 489 (550)
T KOG0578|consen 425 -KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL------YL-IA-TNGTPK-----L- 489 (550)
T ss_pred -ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHH------HH-Hh-hcCCCC-----c-
Confidence 445688999999999999999999999999999999999999999542221111 11 11 111111 1
Q ss_pred cCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 739 SNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 739 ~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
.........|.+++.+||+.|+++|+++.|+++.
T Consensus 490 -k~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 490 -KNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred -CCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 1233344678899999999999999999999875
|
|
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-39 Score=361.73 Aligned_cols=262 Identities=27% Similarity=0.450 Sum_probs=204.4
Q ss_pred hCCceeeeEEeecCceEEEEEEec------CCCEEEEEEeeccc-ccchHHHHHHHHHHhhc-cCCceeeEeeeeecCCc
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILD------DGREVAVKVLKRAN-QHGGREFLAELEMLSRL-HHRNLVKLFGVCIEDNN 569 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~------~g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~~~ 569 (897)
.++|++.+.||+|+||.||+|+.. ++..||||+++... ......+.+|+++|+.+ +|+||++++++|...+.
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence 457888999999999999999842 34579999997543 22345688999999999 89999999999999999
Q ss_pred eEEEEeeccCCccccccccCCC----------------------------------------------------------
Q 002647 570 RCLVYELIHNGSLESHLHGDDK---------------------------------------------------------- 591 (897)
Q Consensus 570 ~~LV~Ey~~gGSL~~~L~~~~~---------------------------------------------------------- 591 (897)
.++||||+++|+|.++++....
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 9999999999999998853210
Q ss_pred --------CCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcccccc
Q 002647 592 --------VNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTH 663 (897)
Q Consensus 592 --------~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~~~t~ 663 (897)
...++++.++++|+.||++||+|||+.+ |+||||||+|||+++++.+||+|||+++.............
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~ 273 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN---CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGN 273 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---EEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccC
Confidence 1135888999999999999999999887 99999999999999999999999999976533222222223
Q ss_pred cccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccccccchhccCCC
Q 002647 664 VMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESNIS 742 (897)
Q Consensus 664 ~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~ 742 (897)
..++..|+|||++....++.++|||||||++|||++ |+.||....... .+... .. ... .. ..+
T Consensus 274 ~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~--~~~~~----~~--~~~----~~----~~~ 337 (374)
T cd05106 274 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS--KFYKM----VK--RGY----QM----SRP 337 (374)
T ss_pred CCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH--HHHHH----HH--ccc----Cc----cCC
Confidence 345678999999998899999999999999999997 999996432211 11100 00 000 00 011
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 002647 743 YDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVC 778 (897)
Q Consensus 743 ~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~ 778 (897)
......+.+++.+||+.||++||++.||++.|+.+.
T Consensus 338 ~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 338 DFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 112356789999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=356.89 Aligned_cols=256 Identities=27% Similarity=0.374 Sum_probs=208.3
Q ss_pred HhhCCceeeeEEeecCceEEEEEEe-cCCCEEEEEEeecc----cc-cchHHHHHHHHHHhhcc-CCceeeEeeeeecCC
Q 002647 496 KATNGFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRA----NQ-HGGREFLAELEMLSRLH-HRNLVKLFGVCIEDN 568 (897)
Q Consensus 496 ~at~~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~----~~-~~~~~f~~Ev~iL~~L~-HpNIV~Llg~~~~~~ 568 (897)
...++|.+.+.||+|.||+|++|.. .+|+.||||++... .. ...+.+.+|+.++++++ ||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 3467899999999999999999985 47899999977653 11 23456778999999999 999999999999999
Q ss_pred ceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccC-CceEEeccC
Q 002647 569 NRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHD-FTPKVSDFG 647 (897)
Q Consensus 569 ~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~-~~vKLsDFG 647 (897)
..++||||+.+|+|.+++.. .+++.+.++.+++.|++.|++|||..+ |+|||||++|||+|.+ +++||+|||
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~----~g~l~E~~ar~~F~Qlisav~y~H~~g---i~HRDLK~ENilld~~~~~~Kl~DFG 166 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVN----KGRLKEDEARKYFRQLISAVAYCHSRG---IVHRDLKPENILLDGNEGNLKLSDFG 166 (370)
T ss_pred eEEEEEEecCCccHHHHHHH----cCCCChHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEecCCCCCEEEeccc
Confidence 99999999999999999953 567999999999999999999999998 9999999999999999 999999999
Q ss_pred cchhcccCCCcccccccccccccCChhhhhcCC-CC-ccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccc
Q 002647 648 LARTALDEGNKHISTHVMGTFGYLAPEYAMTGH-LL-VKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTT 725 (897)
Q Consensus 648 LAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~-~t-~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~ 725 (897)
++.... .........+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||+... .....+.+...
T Consensus 167 ~s~~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~------~~~l~~ki~~~ 238 (370)
T KOG0583|consen 167 LSAISP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN------VPNLYRKIRKG 238 (370)
T ss_pred cccccC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc------HHHHHHHHhcC
Confidence 998753 2334456789999999999999877 85 78999999999999999999998522 11111111111
Q ss_pred cccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 002647 726 KEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVC 778 (897)
Q Consensus 726 ~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~ 778 (897)
.-.+...++ ..++..++.+|+..||.+|+++.||+ .-..+.
T Consensus 239 ~~~~p~~~~-----------S~~~~~Li~~mL~~~P~~R~t~~~i~-~h~w~~ 279 (370)
T KOG0583|consen 239 EFKIPSYLL-----------SPEARSLIEKMLVPDPSTRITLLEIL-EHPWFQ 279 (370)
T ss_pred CccCCCCcC-----------CHHHHHHHHHHcCCCcccCCCHHHHh-hChhhc
Confidence 111111110 45678899999999999999999998 333333
|
|
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-39 Score=342.41 Aligned_cols=258 Identities=29% Similarity=0.509 Sum_probs=206.4
Q ss_pred CCceeeeEEeecCceEEEEEEecC------CCEEEEEEeecccc-cchHHHHHHHHHHhhccCCceeeEeeeeecCCceE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILDD------GREVAVKVLKRANQ-HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRC 571 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~~------g~~VAVK~lk~~~~-~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~ 571 (897)
++|++.+.||+|+||.||+|.... ...||+|.++.... ....+|.+|++++.+++|+||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 357788999999999999998643 25799999875432 23457899999999999999999999999988999
Q ss_pred EEEeeccCCccccccccCCC------------CCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCC
Q 002647 572 LVYELIHNGSLESHLHGDDK------------VNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDF 639 (897)
Q Consensus 572 LV~Ey~~gGSL~~~L~~~~~------------~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~ 639 (897)
++|||+++|+|.+++..... ....+++.+++.++.|++.||+|||+.+ |+||||||+|||+++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH---FVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccccceEEEcCCC
Confidence 99999999999999864311 1146889999999999999999999988 99999999999999999
Q ss_pred ceEEeccCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHh
Q 002647 640 TPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAW 718 (897)
Q Consensus 640 ~vKLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w 718 (897)
.+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||...... .+..+
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~---~~~~~ 238 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ---EVIEM 238 (283)
T ss_pred cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHH
Confidence 999999999976533322223334556889999999998899999999999999999998 99998654321 22211
Q ss_pred hhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002647 719 ARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKL 776 (897)
Q Consensus 719 ~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~ 776 (897)
... ......+.....++.+|+.+||+.||++||++.||++.|+.
T Consensus 239 i~~--------------~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 239 IRS--------------RQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HHc--------------CCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 110 00011223445678899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-39 Score=352.68 Aligned_cols=257 Identities=26% Similarity=0.403 Sum_probs=202.4
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCC--ceEEEEe
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDN--NRCLVYE 575 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~--~~~LV~E 575 (897)
.++...+.||+|+||+||++... +|+..|||.+...+....+.+.+|+.+|++|+|+|||+++|.....+ .++++||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 34666789999999999999965 48999999987654333577899999999999999999999855544 5899999
Q ss_pred eccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEcc-CCceEEeccCcchhccc
Q 002647 576 LIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEH-DFTPKVSDFGLARTALD 654 (897)
Q Consensus 576 y~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~-~~~vKLsDFGLAr~~~~ 654 (897)
|+++|+|.+++... .+.|++..+.+++.||++||+|||+++ |||||||++||||+. ++.+||+|||+++....
T Consensus 97 y~~~GsL~~~~~~~---g~~l~E~~v~~ytr~iL~GL~ylHs~g---~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~ 170 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRY---GGKLPEPLVRRYTRQILEGLAYLHSKG---IVHCDIKPANILLDPSNGDVKLADFGLAKKLES 170 (313)
T ss_pred ccCCCcHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCcccceEEEeCCCCeEEeccCcccccccc
Confidence 99999999999642 227999999999999999999999888 999999999999999 79999999999986543
Q ss_pred -CCCcccccccccccccCChhhhhcCCC-CccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccccccccc
Q 002647 655 -EGNKHISTHVMGTFGYLAPEYAMTGHL-LVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTI 732 (897)
Q Consensus 655 -~~~~~~~t~~~GT~~Y~APE~l~~~~~-t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~i 732 (897)
...........||+.|||||++..+.. ..++|||||||+++||+||+.||... .....+.-..... .
T Consensus 171 ~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-----~~~~~~~~~ig~~-~----- 239 (313)
T KOG0198|consen 171 KGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-----FEEAEALLLIGRE-D----- 239 (313)
T ss_pred ccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-----cchHHHHHHHhcc-C-----
Confidence 111223345789999999999996433 35999999999999999999999643 1111111111111 0
Q ss_pred ccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002647 733 IDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKL 776 (897)
Q Consensus 733 iDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~ 776 (897)
.-| .++........+++..|+..||++|||+.|+++....
T Consensus 240 ~~P----~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~ 279 (313)
T KOG0198|consen 240 SLP----EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFL 279 (313)
T ss_pred CCC----CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhh
Confidence 011 2233344567889999999999999999999887543
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-39 Score=368.56 Aligned_cols=261 Identities=30% Similarity=0.456 Sum_probs=209.8
Q ss_pred hCCceeeeEEeecCceEEEEEEecC--C--CE-EEEEEeec---ccccchHHHHHHHHHHhhccCCceeeEeeeeecCCc
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILDD--G--RE-VAVKVLKR---ANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNN 569 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~~--g--~~-VAVK~lk~---~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~ 569 (897)
.++..+.++||+|+||.||+|++.. + .. ||||..+. .......+|++|+++|++++|+|||+++|++..+..
T Consensus 156 H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~P 235 (474)
T KOG0194|consen 156 HSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEP 235 (474)
T ss_pred ccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCc
Confidence 4455566999999999999999653 2 23 89999985 335566789999999999999999999999999999
Q ss_pred eEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcc
Q 002647 570 RCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLA 649 (897)
Q Consensus 570 ~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLA 649 (897)
.+||||+|.||+|.++|... ...++..++++++.++|+||+|||..+ +|||||.++|+|++.++.+||+||||+
T Consensus 236 l~ivmEl~~gGsL~~~L~k~---~~~v~~~ek~~~~~~AA~Gl~YLh~k~---~IHRDIAARNcL~~~~~~vKISDFGLs 309 (474)
T KOG0194|consen 236 LMLVMELCNGGSLDDYLKKN---KKSLPTLEKLRFCYDAARGLEYLHSKN---CIHRDIAARNCLYSKKGVVKISDFGLS 309 (474)
T ss_pred cEEEEEecCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHhHHHHHHHCC---CcchhHhHHHheecCCCeEEeCccccc
Confidence 99999999999999999642 336999999999999999999999988 999999999999999999999999998
Q ss_pred hhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhccccccc
Q 002647 650 RTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEG 728 (897)
Q Consensus 650 r~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~ 728 (897)
+... ..........-...|+|||.+....|+.++|||||||++||+++ |..||...... .+..|+
T Consensus 310 ~~~~--~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~---~v~~kI--------- 375 (474)
T KOG0194|consen 310 RAGS--QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY---EVKAKI--------- 375 (474)
T ss_pred cCCc--ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH---HHHHHH---------
Confidence 8542 11111112235679999999999999999999999999999999 88899754322 111111
Q ss_pred ccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHhhhh
Q 002647 729 LKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNEFD 782 (897)
Q Consensus 729 l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~~e~~ 782 (897)
+........+......+..++.+||..+|++||+|.+|.+.|+.+.....
T Consensus 376 ----~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 376 ----VKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred ----HhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 01111112233445667788899999999999999999999998876544
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-38 Score=339.87 Aligned_cols=251 Identities=25% Similarity=0.367 Sum_probs=200.0
Q ss_pred CceeeeEEeecCceEEEEEEe-cCCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEe
Q 002647 500 GFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYE 575 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~E 575 (897)
.|+..+.||+|+||+||+|.. .+|+.||||.+.... ......+.+|+++|++++|+||+++++++.+.+..++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 477889999999999999996 478999999986432 2233467899999999999999999999999999999999
Q ss_pred eccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccC
Q 002647 576 LIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655 (897)
Q Consensus 576 y~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~ 655 (897)
|+++|+|.+++... ....+++..++.++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||++......
T Consensus 81 ~~~~g~L~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~ 155 (285)
T cd05631 81 IMNGGDLKFHIYNM--GNPGFDEQRAIFYAAELCCGLEDLQRER---IVYRDLKPENILLDDRGHIRISDLGLAVQIPEG 155 (285)
T ss_pred ecCCCcHHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC
Confidence 99999999887532 2346899999999999999999999887 999999999999999999999999999764221
Q ss_pred CCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccc
Q 002647 656 GNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDP 735 (897)
Q Consensus 656 ~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp 735 (897)
. ......||..|+|||++.+..++.++|||||||++|||++|+.||...........+ ..... +.
T Consensus 156 ~---~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~--~~~~~----------~~ 220 (285)
T cd05631 156 E---TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEV--DRRVK----------ED 220 (285)
T ss_pred C---eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHH--HHHhh----------cc
Confidence 1 223457899999999999999999999999999999999999999754322111110 00000 00
Q ss_pred hhccCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 002647 736 VIESNISYDTLVKVAAIASMCVQPEVSHRPF-----MGEVVQ 772 (897)
Q Consensus 736 ~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPT-----m~EVl~ 772 (897)
...+..+....+.+|+.+||+.||++||+ +.|+++
T Consensus 221 --~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 221 --QEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred --cccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 00112223356788999999999999997 777765
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-39 Score=341.21 Aligned_cols=251 Identities=35% Similarity=0.581 Sum_probs=194.9
Q ss_pred eeeeEEeecCceEEEEEEec-----CCCEEEEEEeeccc-ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEe
Q 002647 502 HTSRIIGEGGFGVVYRGILD-----DGREVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYE 575 (897)
Q Consensus 502 ~~~~~LG~G~fGtVyka~l~-----~g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~E 575 (897)
...+.||.|.||.||+|.+. .+..|+||.++... ....++|.+|++.+++++|+||++++|+|...+..++|||
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e 81 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVME 81 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccc
Confidence 35689999999999999976 25679999996533 2346789999999999999999999999998888999999
Q ss_pred eccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccC
Q 002647 576 LIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655 (897)
Q Consensus 576 y~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~ 655 (897)
|+++|+|.++|... ....+++.+++.|+.||++||.|||+.+ |+|+||+++|||+++++.+||+|||+++.....
T Consensus 82 ~~~~g~L~~~L~~~--~~~~~~~~~~~~i~~~i~~~l~~Lh~~~---iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~ 156 (259)
T PF07714_consen 82 YCPGGSLDDYLKSK--NKEPLSEQQRLSIAIQIAEALSYLHSNN---IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEK 156 (259)
T ss_dssp --TTEBHHHHHHHT--CTTTSBHHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEEETTTEEEEESTTTGEETTTS
T ss_pred cccccccccccccc--cccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccc
Confidence 99999999999753 2356999999999999999999999987 999999999999999999999999999865332
Q ss_pred CCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhccccccccccccc
Q 002647 656 GNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIID 734 (897)
Q Consensus 656 ~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiD 734 (897)
..............|+|||++....++.++||||||+++|||++ |+.||..... .++... +.. .. .
T Consensus 157 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~---~~~~~~---~~~-~~--~---- 223 (259)
T PF07714_consen 157 SKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN---EEIIEK---LKQ-GQ--R---- 223 (259)
T ss_dssp SSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH---HHHHHH---HHT-TE--E----
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccc---cccccc---ccc-cc--c----
Confidence 22233334557789999999999999999999999999999999 7888754321 111111 100 00 0
Q ss_pred chhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002647 735 PVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL 774 (897)
Q Consensus 735 p~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L 774 (897)
...+......+.+++..||+.||++||++.||++.|
T Consensus 224 ----~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 224 ----LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ----TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ----ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 111222345678999999999999999999999876
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=338.15 Aligned_cols=256 Identities=27% Similarity=0.411 Sum_probs=203.5
Q ss_pred hCCceeeeEEeecCceEEEEEEec----CCCEEEEEEeecccc-cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEE
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILD----DGREVAVKVLKRANQ-HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCL 572 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~----~g~~VAVK~lk~~~~-~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~L 572 (897)
.++|++.++||+|+||.||+|.++ .+..||+|.++.... ...+.|.+|+.++++++|+||+++++++..++..++
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI 83 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence 356889999999999999999853 356899999986432 334578999999999999999999999999999999
Q ss_pred EEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhc
Q 002647 573 VYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTA 652 (897)
Q Consensus 573 V~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~ 652 (897)
||||+++|+|.+++... ...+++.+++.++.|++.||+|||+.+ ++||||||+|||++.++.+|++|||.+...
T Consensus 84 v~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~~i~~al~~lH~~~---iiH~dikp~nili~~~~~~~l~dfg~~~~~ 157 (266)
T cd05064 84 VTEYMSNGALDSFLRKH---EGQLVAGQLMGMLPGLASGMKYLSEMG---YVHKGLAAHKVLVNSDLVCKISGFRRLQED 157 (266)
T ss_pred EEEeCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeeccccHhhEEEcCCCcEEECCCcccccc
Confidence 99999999999998632 346899999999999999999999887 999999999999999999999999987643
Q ss_pred ccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccc
Q 002647 653 LDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKT 731 (897)
Q Consensus 653 ~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~ 731 (897)
.... ........++..|+|||++....++.++|||||||++|||++ |+.||...... ....... +...
T Consensus 158 ~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~---~~~~~~~------~~~~- 226 (266)
T cd05064 158 KSEA-IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ---DVIKAVE------DGFR- 226 (266)
T ss_pred cccc-hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH---HHHHHHH------CCCC-
Confidence 2111 111112345678999999999999999999999999999875 99999643221 1111110 0000
Q ss_pred cccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 002647 732 IIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLV 777 (897)
Q Consensus 732 iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l 777 (897)
...+......+.+++..||+.+|++||++.||.+.|+.+
T Consensus 227 -------~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 227 -------LPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred -------CCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 011223345688899999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=349.95 Aligned_cols=263 Identities=24% Similarity=0.395 Sum_probs=207.7
Q ss_pred hCCceeeeEEeecCceEEEEEEe-cCCCEEEEEEeeccccc-chHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEe
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRANQH-GGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYE 575 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~~~~-~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~E 575 (897)
.+.|++.++||.|..++||+|+. ..++.||||++.-.+.. ..+.+.+|+..|+.++||||++++..|..+..+|+||.
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 46788999999999999999994 56899999999754332 25789999999999999999999999999999999999
Q ss_pred eccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccC
Q 002647 576 LIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655 (897)
Q Consensus 576 y~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~ 655 (897)
||.+||+.+.+...- ...+++..+..|++++++||.|||.+| .||||||+.||||+++|.|||+|||.+..+...
T Consensus 105 fMa~GS~ldIik~~~--~~Gl~E~~Ia~iLre~LkaL~YLH~~G---~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~ 179 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYY--PDGLEEASIATILREVLKALDYLHQNG---HIHRDVKAGNILIDSDGTVKLADFGVSASLFDS 179 (516)
T ss_pred hhcCCcHHHHHHHHc--cccccHHHHHHHHHHHHHHHHHHHhcC---ceecccccccEEEcCCCcEEEcCceeeeeeccc
Confidence 999999999997543 334999999999999999999999998 999999999999999999999999998766554
Q ss_pred CCccc-c-cccccccccCChhhhhc--CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccc
Q 002647 656 GNKHI-S-THVMGTFGYLAPEYAMT--GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKT 731 (897)
Q Consensus 656 ~~~~~-~-t~~~GT~~Y~APE~l~~--~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~ 731 (897)
+.... . ..+.||++|||||+++. ..|+.|+||||||+..+||.+|..||....+.. .+. ..+. +....
T Consensus 180 G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmk--vLl---~tLq---n~pp~ 251 (516)
T KOG0582|consen 180 GDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMK--VLL---LTLQ---NDPPT 251 (516)
T ss_pred CceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHH--HHH---HHhc---CCCCC
Confidence 43221 1 56789999999999654 368999999999999999999999997543321 111 0111 11110
Q ss_pred cccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 732 IIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 732 iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
..-..+..+........+.+++..||+.||.+|||+.++++.
T Consensus 252 ~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 252 LLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred cccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 000000111111122368899999999999999999999864
|
|
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=346.57 Aligned_cols=258 Identities=25% Similarity=0.436 Sum_probs=203.7
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCC----EEEEEEeeccc-ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGR----EVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCL 572 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~----~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~L 572 (897)
.+|+..+.||+|+||.||+|++. ++. .||||.++... ....+++.+|+.+++.++|+||++++|+|... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 46889999999999999999864 343 38999987533 33456789999999999999999999999864 5689
Q ss_pred EEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhc
Q 002647 573 VYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTA 652 (897)
Q Consensus 573 V~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~ 652 (897)
|+||+++|+|.+++... ...+++..+++++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++..
T Consensus 86 v~e~~~~g~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~---iiH~dlkp~Nill~~~~~~kl~DfG~a~~~ 159 (316)
T cd05108 86 ITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEERR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (316)
T ss_pred eeecCCCCCHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEecCCCcEEEccccccccc
Confidence 99999999999999642 346899999999999999999999887 999999999999999999999999999865
Q ss_pred ccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccc
Q 002647 653 LDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKT 731 (897)
Q Consensus 653 ~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~ 731 (897)
.............++..|+|||++.+..++.++||||||+++|||++ |+.||+..... .+..+.. .....
T Consensus 160 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~---~~~~~~~----~~~~~-- 230 (316)
T cd05108 160 GADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---EISSILE----KGERL-- 230 (316)
T ss_pred cCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHHh----CCCCC--
Confidence 43322222223345678999999999999999999999999999998 99998643211 1111111 00000
Q ss_pred cccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHhh
Q 002647 732 IIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNE 780 (897)
Q Consensus 732 iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~~e 780 (897)
..+..+...+.+++.+||+.+|.+||++.|++..|..+..+
T Consensus 231 --------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~ 271 (316)
T cd05108 231 --------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 271 (316)
T ss_pred --------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcC
Confidence 00112234678899999999999999999999998877544
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-39 Score=356.54 Aligned_cols=263 Identities=26% Similarity=0.356 Sum_probs=206.3
Q ss_pred hCCceeeeEEeecCceEEEEEE-ecCCCEEEEEEeeccc--ccchHHHHHHHHHHhhccCCceeeEeeeeecC--CceEE
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRAN--QHGGREFLAELEMLSRLHHRNLVKLFGVCIED--NNRCL 572 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~-l~~g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~--~~~~L 572 (897)
.+.|+.+++||+|.||.||||+ ..+|+.||+|++.... +....-..+||.+|++|+||||++|.+...+. ...||
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 3457777899999999999999 5689999999997654 33345567999999999999999999998876 68899
Q ss_pred EEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhc
Q 002647 573 VYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTA 652 (897)
Q Consensus 573 V~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~ 652 (897)
|+|||++ +|..++.. ..-.+++.++..++.|++.||+|||..+ |+|||||.+|||||.+|.+||+|||||+.+
T Consensus 196 VFeYMdh-DL~GLl~~---p~vkft~~qIKc~mkQLl~Gl~~cH~~g---vlHRDIK~SNiLidn~G~LKiaDFGLAr~y 268 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSS---PGVKFTEPQIKCYMKQLLEGLEYCHSRG---VLHRDIKGSNILIDNNGVLKIADFGLARFY 268 (560)
T ss_pred EEecccc-hhhhhhcC---CCcccChHHHHHHHHHHHHHHHHHhhcC---eeeccccccceEEcCCCCEEeccccceeec
Confidence 9999987 88888853 2346999999999999999999999998 999999999999999999999999999976
Q ss_pred ccCCCcccccccccccccCChhhhhcC-CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhH----------Hhhhh
Q 002647 653 LDEGNKHISTHVMGTFGYLAPEYAMTG-HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLV----------AWARP 721 (897)
Q Consensus 653 ~~~~~~~~~t~~~GT~~Y~APE~l~~~-~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv----------~w~~~ 721 (897)
..... ...|..+-|.+|.|||.+.+. .|+.+.|+||.||||.||++|++.|.+...-++...+ .|...
T Consensus 269 ~~~~~-~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~ 347 (560)
T KOG0600|consen 269 TPSGS-APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVS 347 (560)
T ss_pred cCCCC-cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccc
Confidence 54333 335677789999999998865 7899999999999999999999999876544333332 23210
Q ss_pred ccccccccccccc------chhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 722 LLTTKEGLKTIID------PVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 722 l~~~~e~l~~iiD------p~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
-+. ...++. ..+.+. -.......++|+..+|..||.+|.|+.++++.
T Consensus 348 kLP----~~~~~kp~~~y~r~l~E~-~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 348 KLP----HATIFKPQQPYKRRLRET-FKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred cCC----cccccCCCCcccchHHHH-hccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 000 001111 111111 11122456788999999999999999998753
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-38 Score=348.47 Aligned_cols=252 Identities=25% Similarity=0.360 Sum_probs=204.0
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~ 574 (897)
++|++.+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|+++|.+++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 46899999999999999999975 58999999997532 223457889999999999999999999999999999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
||+++|+|.+++.. ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 e~~~g~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~ 153 (333)
T cd05600 81 EYVPGGDFRTLLNN----LGVLSEDHARFYMAEMFEAVDALHELG---YIHRDLKPENFLIDASGHIKLTDFGLSKGIVT 153 (333)
T ss_pred eCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEEEeCcCCccccc
Confidence 99999999999953 346899999999999999999999988 99999999999999999999999999975432
Q ss_pred CCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCch-hhHHhhhhcccccccccccc
Q 002647 655 EGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQE-NLVAWARPLLTTKEGLKTII 733 (897)
Q Consensus 655 ~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~-~lv~w~~~l~~~~e~l~~ii 733 (897)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......+.. .+..|...+.. ....
T Consensus 154 -----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~-----~~~~ 223 (333)
T cd05600 154 -----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQR-----PVYD 223 (333)
T ss_pred -----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccC-----CCCC
Confidence 223457999999999999999999999999999999999999999754322111 11111110000 0000
Q ss_pred cchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 734 DPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 734 Dp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
++ ......++.+++.+||..+|++||++.|+++.
T Consensus 224 ~~------~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 224 DP------RFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred cc------ccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 00 01233567889999999999999999999865
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-39 Score=339.48 Aligned_cols=265 Identities=23% Similarity=0.318 Sum_probs=205.4
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccc--cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEe
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQ--HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYE 575 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~--~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~E 575 (897)
+.|+...++|+|+||+|||++.+ +|+.||||++....+ ...+-.++|+++|++|+|+|+|.|+++|......+||+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 35677789999999999999966 699999999975433 334557899999999999999999999999999999999
Q ss_pred eccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccC
Q 002647 576 LIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655 (897)
Q Consensus 576 y~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~ 655 (897)
||+. ++.+-|. .....++.....+++.|+++|+.|+|+++ ||||||||+||||+.++.+||||||+|+.+...
T Consensus 82 ~~dh-TvL~eLe---~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n---~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p 154 (396)
T KOG0593|consen 82 YCDH-TVLHELE---RYPNGVPSELVKKYLYQLLKAIHFCHKNN---CIHRDIKPENILITQNGVVKLCDFGFARTLSAP 154 (396)
T ss_pred ecch-HHHHHHH---hccCCCCHHHHHHHHHHHHHHhhhhhhcC---eecccCChhheEEecCCcEEeccchhhHhhcCC
Confidence 9987 4433442 22345888999999999999999999998 999999999999999999999999999987642
Q ss_pred CCcccccccccccccCChhhhhc-CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHH--------hhhhccccc
Q 002647 656 GNKHISTHVMGTFGYLAPEYAMT-GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVA--------WARPLLTTK 726 (897)
Q Consensus 656 ~~~~~~t~~~GT~~Y~APE~l~~-~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~--------w~~~l~~~~ 726 (897)
....|.++.|.+|.|||.+.+ .+|....|||++||++.||++|..-|.+.+.-++..++. --+.++...
T Consensus 155 --gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N 232 (396)
T KOG0593|consen 155 --GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSN 232 (396)
T ss_pred --cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccC
Confidence 234567889999999999887 689999999999999999999999886655433322221 112222222
Q ss_pred ccccccccchh------ccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 727 EGLKTIIDPVI------ESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 727 e~l~~iiDp~l------~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
.....+.=|.. +..++ ....-+++++..|++.||++|++-.|++..
T Consensus 233 ~~F~Gv~lP~~~~~epLe~k~p-~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 233 PFFHGVRLPEPEHPEPLERKYP-KISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred CceeeeecCCCCCccchhhhcc-cchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 22111111111 11122 223467899999999999999999998753
|
|
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=338.49 Aligned_cols=257 Identities=29% Similarity=0.490 Sum_probs=206.2
Q ss_pred CCceeeeEEeecCceEEEEEEecC------CCEEEEEEeeccccc-chHHHHHHHHHHhhccCCceeeEeeeeecCCceE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILDD------GREVAVKVLKRANQH-GGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRC 571 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~~------g~~VAVK~lk~~~~~-~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~ 571 (897)
++|.+.+.||+|+||.||+|...+ +..||||.++..... ..+.|.+|+++|++++|+||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 457778999999999999998643 478999999765443 4568999999999999999999999999999999
Q ss_pred EEEeeccCCccccccccCC----------CCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCce
Q 002647 572 LVYELIHNGSLESHLHGDD----------KVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTP 641 (897)
Q Consensus 572 LV~Ey~~gGSL~~~L~~~~----------~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~v 641 (897)
+||||+++|+|.++|.... .....+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH---FVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eeccccccceEEEcCCCeE
Confidence 9999999999999996432 12345889999999999999999999887 9999999999999999999
Q ss_pred EEeccCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhh
Q 002647 642 KVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWAR 720 (897)
Q Consensus 642 KLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~ 720 (897)
||+|||+++...............++..|+|||++....++.++|||||||++|||++ |+.||..... ...+....
T Consensus 162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~---~~~~~~~~ 238 (280)
T cd05049 162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSN---EEVIECIT 238 (280)
T ss_pred EECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCH---HHHHHHHH
Confidence 9999999875433222222234456788999999999999999999999999999998 9999864332 22222211
Q ss_pred hcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 002647 721 PLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775 (897)
Q Consensus 721 ~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~ 775 (897)
. .... ..+......+.+++.+||+.||++||++.||++.|+
T Consensus 239 ~-----~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 239 Q-----GRLL---------QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred c-----CCcC---------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 0 0000 011223456889999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-38 Score=338.01 Aligned_cols=262 Identities=26% Similarity=0.413 Sum_probs=207.4
Q ss_pred hhCCceeeeEEeecCceEEEEEEecC------CCEEEEEEeeccc-ccchHHHHHHHHHHhhc-cCCceeeEeeeeecCC
Q 002647 497 ATNGFHTSRIIGEGGFGVVYRGILDD------GREVAVKVLKRAN-QHGGREFLAELEMLSRL-HHRNLVKLFGVCIEDN 568 (897)
Q Consensus 497 at~~y~~~~~LG~G~fGtVyka~l~~------g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~~ 568 (897)
..++|++.+.||+|+||.||++...+ ...+|+|.++... .....++.+|++++.++ +|+||+++++++..++
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 89 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG 89 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence 44678899999999999999998642 3679999987532 23345688999999999 8999999999999999
Q ss_pred ceEEEEeeccCCccccccccCC------------CCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEc
Q 002647 569 NRCLVYELIHNGSLESHLHGDD------------KVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLE 636 (897)
Q Consensus 569 ~~~LV~Ey~~gGSL~~~L~~~~------------~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd 636 (897)
..++||||+++|+|.++++... .....+++..+++++.|++.||+|||+.+ |+||||||+|||++
T Consensus 90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~Nil~~ 166 (293)
T cd05053 90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK---CIHRDLAARNVLVT 166 (293)
T ss_pred CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---ccccccceeeEEEc
Confidence 9999999999999999986421 22456999999999999999999999887 99999999999999
Q ss_pred cCCceEEeccCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhh
Q 002647 637 HDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENL 715 (897)
Q Consensus 637 ~~~~vKLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~l 715 (897)
+++.+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||...... .+
T Consensus 167 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~~ 243 (293)
T cd05053 167 EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE---EL 243 (293)
T ss_pred CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH---HH
Confidence 999999999999986543322222233345678999999998899999999999999999998 99998643221 11
Q ss_pred HHhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 002647 716 VAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVC 778 (897)
Q Consensus 716 v~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~ 778 (897)
.... ... .....+......+.+|+.+||+.||++||++.|+++.|+.+.
T Consensus 244 ~~~~----~~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 244 FKLL----KEG----------YRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HHHH----HcC----------CcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 1110 000 001122233456889999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-38 Score=332.25 Aligned_cols=251 Identities=27% Similarity=0.447 Sum_probs=202.4
Q ss_pred CCceeeeEEeecCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeecc
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIH 578 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~ 578 (897)
++|++.+.||+|+||.||++.++++..+|+|.++... ...++|.+|+++|++++|+||+++++++.+.+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 4577889999999999999999888899999987433 334688999999999999999999999999999999999999
Q ss_pred CCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCc
Q 002647 579 NGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNK 658 (897)
Q Consensus 579 gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~ 658 (897)
+|+|.++++.. ...+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++.......
T Consensus 83 ~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~- 155 (256)
T cd05114 83 NGCLLNYLRQR---QGKLSKDMLLSMCQDVCEGMEYLERNS---FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY- 155 (256)
T ss_pred CCcHHHHHHhC---ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcceEEEcCCCeEEECCCCCccccCCCce-
Confidence 99999998632 246899999999999999999999887 99999999999999999999999999876432211
Q ss_pred ccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccccccchh
Q 002647 659 HISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVI 737 (897)
Q Consensus 659 ~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l 737 (897)
.......++..|+|||++....++.++||||||+++|||++ |+.||..... ...+.+... .. ....
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~---~~~~~~i~~----~~---~~~~--- 222 (256)
T cd05114 156 TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN---YEVVEMISR----GF---RLYR--- 222 (256)
T ss_pred eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHHHC----CC---CCCC---
Confidence 11122345678999999988889999999999999999999 8999864321 122221111 00 0001
Q ss_pred ccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002647 738 ESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL 774 (897)
Q Consensus 738 ~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L 774 (897)
+......+.+|+.+||+.+|++||++.|+++.|
T Consensus 223 ----~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 223 ----PKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred ----CCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 111234678999999999999999999998876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-38 Score=339.61 Aligned_cols=262 Identities=27% Similarity=0.455 Sum_probs=210.4
Q ss_pred CCceeeeEEeecCceEEEEEEec------CCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD------DGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCL 572 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~------~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~L 572 (897)
.+|.+.+.||+|+||.||+|... ++..+++|.++.......+.+.+|++++++++|+||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 45788899999999999999842 345699999876655555789999999999999999999999999999999
Q ss_pred EEeeccCCccccccccCC------------CCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCc
Q 002647 573 VYELIHNGSLESHLHGDD------------KVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFT 640 (897)
Q Consensus 573 V~Ey~~gGSL~~~L~~~~------------~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~ 640 (897)
||||+++++|.+++.... .....+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCc
Confidence 999999999999986432 12245899999999999999999999988 999999999999999999
Q ss_pred eEEeccCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhh
Q 002647 641 PKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWA 719 (897)
Q Consensus 641 vKLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~ 719 (897)
+||+|||+++...............++..|+|||++....++.++||||||+++|||+| |+.||..... .......
T Consensus 162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~---~~~~~~~ 238 (291)
T cd05094 162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN---TEVIECI 238 (291)
T ss_pred EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHH
Confidence 99999999976543332223334557789999999998999999999999999999999 9999864332 1121111
Q ss_pred hhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHhh
Q 002647 720 RPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNE 780 (897)
Q Consensus 720 ~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~~e 780 (897)
.. ..... ........+.+++.+||+.+|++||++.||++.|+.+.+.
T Consensus 239 ~~-----~~~~~---------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 239 TQ-----GRVLE---------RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred hC-----CCCCC---------CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 00 00000 1112235688999999999999999999999999988653
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-38 Score=348.43 Aligned_cols=264 Identities=25% Similarity=0.394 Sum_probs=204.5
Q ss_pred hCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc-ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEe
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYE 575 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~E 575 (897)
.++|++.+.||+|+||.||+++.. +|..||+|.+.... ....+.+.+|+++|++++|+||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 468999999999999999999965 68889999987542 2334679999999999999999999999999999999999
Q ss_pred eccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccC
Q 002647 576 LIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655 (897)
Q Consensus 576 y~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~ 655 (897)
|+++|+|.+++.. ...+++..+..++.|++.||.|||+.+ .|+||||||+|||++.++.+||+|||+++.....
T Consensus 84 ~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 157 (331)
T cd06649 84 HMDGGSLDQVLKE----AKRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (331)
T ss_pred cCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccccccccc
Confidence 9999999999853 346899999999999999999999753 3999999999999999999999999998765322
Q ss_pred CCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhh-hccccccc------
Q 002647 656 GNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWAR-PLLTTKEG------ 728 (897)
Q Consensus 656 ~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~-~l~~~~e~------ 728 (897)
......|+..|+|||++.+..++.++|||||||++|||+||+.||......+ +..... ......+.
T Consensus 158 ----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 230 (331)
T cd06649 158 ----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKE---LEAIFGRPVVDGEEGEPHSIS 230 (331)
T ss_pred ----ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHhcccccccccCCccccC
Confidence 1234568999999999999899999999999999999999999996433211 111100 00000000
Q ss_pred ----------------------ccccccchh----ccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002647 729 ----------------------LKTIIDPVI----ESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL 774 (897)
Q Consensus 729 ----------------------l~~iiDp~l----~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L 774 (897)
...+.+... ...........+.+|+.+||+.||++||++.|+++.-
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~ 302 (331)
T cd06649 231 PRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHT 302 (331)
T ss_pred cccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 000000000 0000112335688999999999999999999998754
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-38 Score=332.35 Aligned_cols=255 Identities=26% Similarity=0.444 Sum_probs=206.0
Q ss_pred hCCceeeeEEeecCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeec
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELI 577 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~ 577 (897)
.++|++.++||+|+||.||+|...++..||+|.+.... ...+.+.+|+.++++++|+||+++++++...+..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 35788999999999999999998888899999987533 23578999999999999999999999999999999999999
Q ss_pred cCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCC
Q 002647 578 HNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN 657 (897)
Q Consensus 578 ~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~ 657 (897)
++|+|.++++.. ....+++..++.++.|+++||+|||+.+ ++||||||+||++++++.+||+|||+++......
T Consensus 84 ~~~~L~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~- 157 (261)
T cd05072 84 AKGSLLDFLKSD--EGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNE- 157 (261)
T ss_pred CCCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEecCCCcEEECCCccceecCCCc-
Confidence 999999999643 2346899999999999999999999887 9999999999999999999999999998653321
Q ss_pred cccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccccccch
Q 002647 658 KHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPV 736 (897)
Q Consensus 658 ~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~ 736 (897)
........++..|+|||++....++.++|||||||++|||+| |+.||..... .....+..... .. +
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~---~~~~~~~~~~~----~~-----~- 224 (261)
T cd05072 158 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN---SDVMSALQRGY----RM-----P- 224 (261)
T ss_pred eeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH---HHHHHHHHcCC----CC-----C-
Confidence 111223345678999999988889999999999999999998 9999864321 12222111100 00 0
Q ss_pred hccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002647 737 IESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKL 776 (897)
Q Consensus 737 l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~ 776 (897)
........+.+++.+|++.+|++||++.++.+.|+.
T Consensus 225 ----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 225 ----RMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred ----CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 011223457889999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-38 Score=339.46 Aligned_cols=262 Identities=28% Similarity=0.451 Sum_probs=209.0
Q ss_pred CCceeeeEEeecCceEEEEEEec------CCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD------DGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCL 572 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~------~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~L 572 (897)
++|.+.+.||+|+||+||++... ++..+|+|.+........+.+.+|++++++++|+||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 56888999999999999999842 345689999986655556789999999999999999999999999999999
Q ss_pred EEeeccCCccccccccCC---------CCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEE
Q 002647 573 VYELIHNGSLESHLHGDD---------KVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKV 643 (897)
Q Consensus 573 V~Ey~~gGSL~~~L~~~~---------~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKL 643 (897)
||||+++++|.+++.... .....+++.+++.++.|++.||+|||+.+ |+||||||+|||+++++.+||
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~---i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCcEEe
Confidence 999999999999986422 12235999999999999999999999888 999999999999999999999
Q ss_pred eccCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhc
Q 002647 644 SDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPL 722 (897)
Q Consensus 644 sDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l 722 (897)
+|||+++...............++..|+|||++....++.++|||||||++|||+| |+.||...... ......
T Consensus 162 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~---~~~~~i--- 235 (288)
T cd05093 162 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN---EVIECI--- 235 (288)
T ss_pred ccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHH---
Confidence 99999986533222222233446778999999998899999999999999999999 89998643321 111110
Q ss_pred ccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHhh
Q 002647 723 LTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNE 780 (897)
Q Consensus 723 ~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~~e 780 (897)
. . ..... .+......+.+|+.+||+.||.+||++.||++.|+.+...
T Consensus 236 ~-~-~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 236 T-Q-GRVLQ---------RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred H-c-CCcCC---------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 0 0 00000 0111234688999999999999999999999999887654
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-38 Score=337.22 Aligned_cols=266 Identities=21% Similarity=0.281 Sum_probs=201.4
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc--ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEe
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN--QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYE 575 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~E 575 (897)
++|++.+.||+|+||+||+|+.+ +++.||||+++... ....+.+.+|++++++++|+||+++++++..++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 47899999999999999999975 67899999987532 2334678899999999999999999999999999999999
Q ss_pred eccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccC
Q 002647 576 LIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655 (897)
Q Consensus 576 y~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~ 655 (897)
|++++.|..+.. ....+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~~~~~l~~~~~----~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 153 (287)
T cd07848 81 YVEKNMLELLEE----MPNGVPPEKVRSYIYQLIKAIHWCHKND---IVHRDIKPENLLISHNDVLKLCDFGFARNLSEG 153 (287)
T ss_pred cCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccCccccccc
Confidence 999887765542 2346899999999999999999999887 999999999999999999999999999865322
Q ss_pred CCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhh-hhc-------ccccc
Q 002647 656 GNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWA-RPL-------LTTKE 727 (897)
Q Consensus 656 ~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~-~~l-------~~~~e 727 (897)
. ........|+..|+|||++.+..++.++|||||||++|||++|+.||......+....+... ..+ .....
T Consensus 154 ~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07848 154 S-NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNP 232 (287)
T ss_pred c-cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccc
Confidence 2 12223457899999999999888999999999999999999999999754321111100000 000 00000
Q ss_pred cccccccchhc------cCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 728 GLKTIIDPVIE------SNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 728 ~l~~iiDp~l~------~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
.......+... ..........+.+|+.+||+.||++||++.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 233 RFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred hhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000000000 0011112346889999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-38 Score=332.31 Aligned_cols=256 Identities=27% Similarity=0.437 Sum_probs=205.6
Q ss_pred CCceeeeEEeecCceEEEEEEecC----CCEEEEEEeeccc-ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILDD----GREVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLV 573 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~~----g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV 573 (897)
++|.+.+.||+|+||+||+|.+.. ...||||.++... .....+|.+|+.++++++|+||+++++++.+.+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 568899999999999999999742 3579999987543 23346789999999999999999999999999999999
Q ss_pred EeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcc
Q 002647 574 YELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTAL 653 (897)
Q Consensus 574 ~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~ 653 (897)
|||+++|+|.+++... ...+++.++++++.|++.||+|||+.+ |+|+||||+|||+++++.+||+|||+++...
T Consensus 84 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 157 (266)
T cd05033 84 TEYMENGSLDKFLREN---DGKFTVGQLVGMLRGIASGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRRLE 157 (266)
T ss_pred EEcCCCCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCCEEECccchhhccc
Confidence 9999999999999642 347899999999999999999999887 9999999999999999999999999998764
Q ss_pred cCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhccccccccccc
Q 002647 654 DEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTI 732 (897)
Q Consensus 654 ~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~i 732 (897)
............++..|+|||.+....++.++||||||+++|||++ |..||..... ..+..+.... ...
T Consensus 158 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~---~~~~~~~~~~----~~~--- 227 (266)
T cd05033 158 DSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN---QDVIKAVEDG----YRL--- 227 (266)
T ss_pred ccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCH---HHHHHHHHcC----CCC---
Confidence 2222222223345678999999998899999999999999999998 9999854321 1222111100 000
Q ss_pred ccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 002647 733 IDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLV 777 (897)
Q Consensus 733 iDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l 777 (897)
..+.+....+.+++.+||+.+|++||++.||++.|+.+
T Consensus 228 -------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 228 -------PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred -------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 01123345688999999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-38 Score=332.37 Aligned_cols=255 Identities=29% Similarity=0.470 Sum_probs=205.3
Q ss_pred hCCceeeeEEeecCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeec
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELI 577 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~ 577 (897)
.++|++.+.||+|+||.||+|...+++.||||.++... ...+++.+|++++++++|+||+++++++...+..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM 83 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence 45688999999999999999998878899999987543 23567999999999999999999999999999999999999
Q ss_pred cCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCC
Q 002647 578 HNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN 657 (897)
Q Consensus 578 ~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~ 657 (897)
++++|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||+++.......
T Consensus 84 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (261)
T cd05068 84 KYGSLLEYLQGGA--GRALKLPQLIDMAAQVASGMAYLEAQN---YIHRDLAARNVLVGENNICKVADFGLARVIKEDIY 158 (261)
T ss_pred cCCcHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCcceEEEcCCCCEEECCcceEEEccCCcc
Confidence 9999999996432 346899999999999999999999887 99999999999999999999999999986542211
Q ss_pred cccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccccccch
Q 002647 658 KHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPV 736 (897)
Q Consensus 658 ~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~ 736 (897)
........+..|+|||++....++.++||||||+++|||+| |+.||..... ..+..... ....
T Consensus 159 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~~~~~~~------~~~~------ 222 (261)
T cd05068 159 -EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN---AEVLQQVD------QGYR------ 222 (261)
T ss_pred -cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH---HHHHHHHH------cCCC------
Confidence 11111223457999999998899999999999999999999 9999864321 11111100 0000
Q ss_pred hccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002647 737 IESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKL 776 (897)
Q Consensus 737 l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~ 776 (897)
...+......+.+++.+|++.+|++||++.++++.|+.
T Consensus 223 --~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 223 --MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred --CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 01112234568899999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=344.35 Aligned_cols=244 Identities=25% Similarity=0.346 Sum_probs=198.8
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~ 574 (897)
++|++.+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|+++|++++|+||+++++++.+++..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 57889999999999999999975 68899999997532 233457889999999999999999999999999999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+||||+.++.+||+|||+++....
T Consensus 98 e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 170 (329)
T PTZ00263 98 EFVVGGELFTHLRK----AGRFPNDVAKFYHAELVLAFEYLHSKD---IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD 170 (329)
T ss_pred cCCCCChHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEECCCCCEEEeeccCceEcCC
Confidence 99999999999853 346889999999999999999999988 99999999999999999999999999986432
Q ss_pred CCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccccccccccc
Q 002647 655 EGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIID 734 (897)
Q Consensus 655 ~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiD 734 (897)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .... ..+.....
T Consensus 171 ~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~---~~~~---~~i~~~~~------- 232 (329)
T PTZ00263 171 R-----TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP---FRIY---EKILAGRL------- 232 (329)
T ss_pred C-----cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH---HHHH---HHHhcCCc-------
Confidence 1 1235799999999999999999999999999999999999999964321 1111 11111000
Q ss_pred chhccCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 002647 735 PVIESNISYDTLVKVAAIASMCVQPEVSHRPF-----MGEVVQ 772 (897)
Q Consensus 735 p~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPT-----m~EVl~ 772 (897)
.++......+.+|+.+||+.||.+|++ +.|+++
T Consensus 233 -----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 233 -----KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred -----CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 011112245778999999999999996 566654
|
|
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-38 Score=335.54 Aligned_cols=257 Identities=29% Similarity=0.507 Sum_probs=203.3
Q ss_pred CCceeeeEEeecCceEEEEEEe-----cCCCEEEEEEeeccc-ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGIL-----DDGREVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCL 572 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l-----~~g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~L 572 (897)
++|++.+.||+|+||+||+|.+ .++..||+|.++... .....+|.+|++++++++|+||+++++++..++..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 4577889999999999999984 246789999997533 2233678899999999999999999999999999999
Q ss_pred EEeeccCCccccccccCC-------------CCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCC
Q 002647 573 VYELIHNGSLESHLHGDD-------------KVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDF 639 (897)
Q Consensus 573 V~Ey~~gGSL~~~L~~~~-------------~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~ 639 (897)
||||+++|+|.+++.... .....+++.+++.++.|++.||+|||+.+ |+||||||+|||+++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC---eehhccccceEEEcCCC
Confidence 999999999999985321 01235889999999999999999999887 99999999999999999
Q ss_pred ceEEeccCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHh
Q 002647 640 TPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAW 718 (897)
Q Consensus 640 ~vKLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w 718 (897)
.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||..... ..+...
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~---~~~~~~ 238 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN---QEVIEM 238 (283)
T ss_pred cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH---HHHHHH
Confidence 999999999986543332222334456778999999988889999999999999999999 9989864321 111111
Q ss_pred hhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 002647 719 ARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775 (897)
Q Consensus 719 ~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~ 775 (897)
... .. . ...+......+.+++.+||+.||++||++.+|.+.|+
T Consensus 239 ~~~----~~-~---------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05090 239 VRK----RQ-L---------LPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLR 281 (283)
T ss_pred HHc----CC-c---------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhh
Confidence 110 00 0 0111223356788999999999999999999998886
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-38 Score=333.97 Aligned_cols=256 Identities=30% Similarity=0.484 Sum_probs=210.4
Q ss_pred hhCCceeeeEEeecCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 497 ATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 497 at~~y~~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
...+|.+.++||.|+||.||+|...++..+|+|.++........++.+|+++++.++|+||+++++++...+..++||||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL 83 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence 44568888999999999999999888999999999876665567899999999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
+++|+|.+++... ....+++..++.++.|++.||+|||+.+ |+|+||||+|||+++++.+||+|||++.......
T Consensus 84 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~ 158 (261)
T cd05148 84 MEKGSLLAFLRSP--EGQVLPVASLIDMACQVAEGMAYLEEQN---SIHRDLAARNILVGEDLVCKVADFGLARLIKEDV 158 (261)
T ss_pred cccCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccCcceEEEcCCceEEEccccchhhcCCcc
Confidence 9999999999643 2356899999999999999999999887 9999999999999999999999999997653221
Q ss_pred CcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccccccc
Q 002647 657 NKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDP 735 (897)
Q Consensus 657 ~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp 735 (897)
. ......++..|+|||++....++.++||||||+++|+|++ |+.||..... .....+... .
T Consensus 159 ~--~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~---~~~~~~~~~------~------- 220 (261)
T cd05148 159 Y--LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN---HEVYDQITA------G------- 220 (261)
T ss_pred c--cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH---HHHHHHHHh------C-------
Confidence 1 1123345678999999988889999999999999999998 8999964331 112111110 0
Q ss_pred hhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002647 736 VIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKL 776 (897)
Q Consensus 736 ~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~ 776 (897)
.....+......+.+++.+||+.||++||++.|+++.|+.
T Consensus 221 -~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 221 -YRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred -CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 0001122334567899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-38 Score=346.07 Aligned_cols=241 Identities=25% Similarity=0.350 Sum_probs=195.6
Q ss_pred eEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccCC
Q 002647 505 RIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNG 580 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~gG 580 (897)
++||+|+||.||++... +|+.||||+++... ......+.+|+++|++++|+||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999964 68999999997532 223356788999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCccc
Q 002647 581 SLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHI 660 (897)
Q Consensus 581 SL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~~ 660 (897)
+|.+++.. ...+++.++..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 ~L~~~l~~----~~~~~~~~~~~~~~qi~~~L~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~--~~ 151 (323)
T cd05571 81 ELFFHLSR----ERVFSEDRARFYGAEIVSALGYLHSCD---VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG--AT 151 (323)
T ss_pred cHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC--Cc
Confidence 99999853 356899999999999999999999988 9999999999999999999999999987532211 22
Q ss_pred ccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhccC
Q 002647 661 STHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESN 740 (897)
Q Consensus 661 ~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~~ 740 (897)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+. ..+.... ... +. .
T Consensus 152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~---~~~~~~~---~~~--------~~----~ 213 (323)
T cd05571 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---EKLFELI---LME--------EI----R 213 (323)
T ss_pred ccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH---HHHHHHH---HcC--------CC----C
Confidence 2346799999999999999999999999999999999999999964321 1111110 000 00 1
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 002647 741 ISYDTLVKVAAIASMCVQPEVSHRP-----FMGEVVQ 772 (897)
Q Consensus 741 ~~~e~~~~L~~Li~~CL~~dP~~RP-----Tm~EVl~ 772 (897)
++......+.+++.+||+.||++|| ++.|+++
T Consensus 214 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 214 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 1222335678899999999999999 7888764
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-38 Score=337.25 Aligned_cols=260 Identities=27% Similarity=0.427 Sum_probs=205.3
Q ss_pred CceeeeEEeecCceEEEEEEec------CCCEEEEEEeecccc-cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEE
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD------DGREVAVKVLKRANQ-HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCL 572 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~------~g~~VAVK~lk~~~~-~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~L 572 (897)
+|++.++||+|+||.||+|+.. ....+|+|.+..... ...+++.+|++++++++|+||+++++.|..++..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4678899999999999999853 235789998875432 234678999999999999999999999999999999
Q ss_pred EEeeccCCccccccccCCC--------------------CCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCc
Q 002647 573 VYELIHNGSLESHLHGDDK--------------------VNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSN 632 (897)
Q Consensus 573 V~Ey~~gGSL~~~L~~~~~--------------------~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsN 632 (897)
|+||+.+|+|.+++..... ....+++.+++.++.|++.||+|||+.+ |+||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK---LVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC---eehhhhhhhe
Confidence 9999999999998864211 1235889999999999999999999887 9999999999
Q ss_pred EEEccCCceEEeccCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCC
Q 002647 633 ILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPG 711 (897)
Q Consensus 633 ILLd~~~~vKLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~ 711 (897)
||+++++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||+| |+.||.....
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-- 235 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP-- 235 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH--
Confidence 9999999999999999986543322222223445678999999988889999999999999999999 9999864322
Q ss_pred chhhHHhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHh
Q 002647 712 QENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCN 779 (897)
Q Consensus 712 ~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~~ 779 (897)
..+..+.... . ....+......+.+++..||+.+|++||++.|+++.|+.+..
T Consensus 236 -~~~~~~~~~~------~--------~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 236 -ERLFNLLKTG------Y--------RMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred -HHHHHHHhCC------C--------CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 1222211110 0 011122233568899999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=355.81 Aligned_cols=253 Identities=26% Similarity=0.385 Sum_probs=208.4
Q ss_pred HhhCCceeeeEEeecCceEEEEEEe-cCCCEEEEEEeec---ccccchHHHHHHHHHHhhc-cCCceeeEeeeeecCCce
Q 002647 496 KATNGFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKR---ANQHGGREFLAELEMLSRL-HHRNLVKLFGVCIEDNNR 570 (897)
Q Consensus 496 ~at~~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~---~~~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~~~~ 570 (897)
+..++|..+++||+|+|++|++|+. +.++++|||++.+ ..+...+....|-++|.+| .||.|++|+-.|.++..+
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL 149 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL 149 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence 3456788999999999999999994 5789999999864 2233445677899999999 899999999999999999
Q ss_pred EEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcch
Q 002647 571 CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR 650 (897)
Q Consensus 571 ~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr 650 (897)
|+|+||++||+|.++|+. .+.|++.....++.+|+.||+|||.+| ||||||||+|||||+|+++||+|||.|+
T Consensus 150 YFvLe~A~nGdll~~i~K----~Gsfde~caR~YAAeIldAleylH~~G---IIHRDlKPENILLd~dmhikITDFGsAK 222 (604)
T KOG0592|consen 150 YFVLEYAPNGDLLDLIKK----YGSFDETCARFYAAEILDALEYLHSNG---IIHRDLKPENILLDKDGHIKITDFGSAK 222 (604)
T ss_pred EEEEEecCCCcHHHHHHH----hCcchHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeEcCCCcEEEeeccccc
Confidence 999999999999999953 467999999999999999999999998 9999999999999999999999999998
Q ss_pred hcccCCCc---------ccc--cccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhh
Q 002647 651 TALDEGNK---------HIS--THVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWA 719 (897)
Q Consensus 651 ~~~~~~~~---------~~~--t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~ 719 (897)
.+.+.... ... ..++||..|.+||++.++..+..+|||+||||||.|+.|++||...+. +..+
T Consensus 223 ~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne-----yliF- 296 (604)
T KOG0592|consen 223 ILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE-----YLIF- 296 (604)
T ss_pred cCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH-----HHHH-
Confidence 76432211 112 458999999999999999999999999999999999999999975432 1111
Q ss_pred hhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 720 RPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 720 ~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
+.++.. | -.++..-.+...+|+.+.|..||.+|.+..+|.++
T Consensus 297 qkI~~l--------~----y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 297 QKIQAL--------D----YEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred HHHHHh--------c----ccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 111110 1 11233333567789999999999999999888664
|
|
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-38 Score=335.36 Aligned_cols=259 Identities=28% Similarity=0.466 Sum_probs=203.5
Q ss_pred hhCCceeeeEEeecCceEEEEEEec------CCCEEEEEEeeccc-ccchHHHHHHHHHHhhccCCceeeEeeeeecCCc
Q 002647 497 ATNGFHTSRIIGEGGFGVVYRGILD------DGREVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNN 569 (897)
Q Consensus 497 at~~y~~~~~LG~G~fGtVyka~l~------~g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~ 569 (897)
.+++|++.+.||+|+||.||+|... ++..||||+++... .....+|.+|+.+++.++|+||+++++++.++..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4678999999999999999999753 24679999986432 2234578999999999999999999999999899
Q ss_pred eEEEEeeccCCccccccccCCCC------CCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEE
Q 002647 570 RCLVYELIHNGSLESHLHGDDKV------NGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKV 643 (897)
Q Consensus 570 ~~LV~Ey~~gGSL~~~L~~~~~~------~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKL 643 (897)
.++||||+++|+|.+++...... ...+++..++.++.|+++||+|||+.+ ++||||||+|||+++++.+||
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCcchheEEEcCCCCEEE
Confidence 99999999999999998643211 234688999999999999999999887 999999999999999999999
Q ss_pred eccCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhc
Q 002647 644 SDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPL 722 (897)
Q Consensus 644 sDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l 722 (897)
+|||+++...............++..|+|||++....++.++|||||||++|||++ |..||..... .....+..
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~---~~~~~~~~-- 235 (277)
T cd05062 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN---EQVLRFVM-- 235 (277)
T ss_pred CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHHH--
Confidence 99999876533222222223345788999999998899999999999999999999 7888864322 11111110
Q ss_pred ccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 002647 723 LTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775 (897)
Q Consensus 723 ~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~ 775 (897)
..... ..+......+.+++.+||+.||++||++.|+++.|+
T Consensus 236 ---~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 236 ---EGGLL---------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred ---cCCcC---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 00000 011223356889999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-38 Score=364.70 Aligned_cols=254 Identities=22% Similarity=0.280 Sum_probs=205.3
Q ss_pred CceeeeEEeecCceEEEEEEec-C-CCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeec
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-D-GREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELI 577 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~-g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~ 577 (897)
.|.+.+.||+|+||.||+|... + ++.||+|.+..........+.+|+++|+.++|+|||+++++|..++..+|||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 3889999999999999999854 3 6788999876555444567888999999999999999999999999999999999
Q ss_pred cCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCC
Q 002647 578 HNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN 657 (897)
Q Consensus 578 ~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~ 657 (897)
++|+|.++|+.......++++.++..++.||+.||.|||+.+ |+||||||+||||+.++.+||+|||+++.......
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK---MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 999999988654334557899999999999999999999887 99999999999999999999999999986543322
Q ss_pred cccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchh
Q 002647 658 KHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVI 737 (897)
Q Consensus 658 ~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l 737 (897)
........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..+.. ..... . .+
T Consensus 225 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~---~~~~~---~~~~~--~----~~--- 289 (478)
T PTZ00267 225 LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ---REIMQ---QVLYG--K----YD--- 289 (478)
T ss_pred cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH---HHHHH---HHHhC--C----CC---
Confidence 2334456799999999999999999999999999999999999999964321 11111 11100 0 00
Q ss_pred ccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 738 ESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 738 ~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
..+......+.+|+.+||+.||++||++.+++..
T Consensus 290 --~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 290 --PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred --CCCccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 0111223567899999999999999999999753
|
|
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=330.08 Aligned_cols=257 Identities=26% Similarity=0.423 Sum_probs=201.7
Q ss_pred ceeeeEEeecCceEEEEEEecC----CCEEEEEEeeccc--ccchHHHHHHHHHHhhccCCceeeEeeeeecCCc-----
Q 002647 501 FHTSRIIGEGGFGVVYRGILDD----GREVAVKVLKRAN--QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNN----- 569 (897)
Q Consensus 501 y~~~~~LG~G~fGtVyka~l~~----g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~----- 569 (897)
|.+.+.||+|+||.||+|.+.. +..||||+++... .....++.+|+++++.++|+||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 4567899999999999999642 3679999987532 2334578999999999999999999999876554
Q ss_pred -eEEEEeeccCCccccccccCCC--CCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEecc
Q 002647 570 -RCLVYELIHNGSLESHLHGDDK--VNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDF 646 (897)
Q Consensus 570 -~~LV~Ey~~gGSL~~~L~~~~~--~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDF 646 (897)
.++|+||+++|+|.+++..... ....+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN---FIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchheEEECCCCeEEECCc
Confidence 6899999999999998854321 2246899999999999999999999887 999999999999999999999999
Q ss_pred CcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccc
Q 002647 647 GLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTT 725 (897)
Q Consensus 647 GLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~ 725 (897)
|+++...............++..|+|||++....++.++||||||+++|||++ |..||..... ..+..+...
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~---~~~~~~~~~---- 230 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN---HEIYDYLRH---- 230 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHc----
Confidence 99986543322222222345678999999988889999999999999999999 8888864322 112221110
Q ss_pred cccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 002647 726 KEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLV 777 (897)
Q Consensus 726 ~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l 777 (897)
.. ....+......+.+++.+||+.||++||++.||++.|+.+
T Consensus 231 ~~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 231 GN----------RLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CC----------CCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00 0011223445788999999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=329.16 Aligned_cols=260 Identities=26% Similarity=0.378 Sum_probs=207.8
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~ 574 (897)
++|++.++||+|+||.||+|+.. +++.||||.++... ......+.+|++++++++|+||+++++++...+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 57889999999999999999964 78999999886422 233356889999999999999999999999989999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
||+++|+|.+++.........+++..++.++.|+++||+|||+.+ |+|+||||+|||++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 999999999888643333456899999999999999999999887 99999999999999999999999999876432
Q ss_pred CCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccccccccccc
Q 002647 655 EGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIID 734 (897)
Q Consensus 655 ~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiD 734 (897)
.. .......|+..|+|||++.+..++.++||||||+++|||++|+.||..... +...+...+.. ...
T Consensus 159 ~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~----~~~~~~~~~~~-------~~~ 225 (267)
T cd08228 159 KT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLFSLCQKIEQ-------CDY 225 (267)
T ss_pred hh--HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc----cHHHHHHHHhc-------CCC
Confidence 21 112234688899999999988899999999999999999999999853321 11111111110 000
Q ss_pred chhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 002647 735 PVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLV 777 (897)
Q Consensus 735 p~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l 777 (897)
+. .........+.+++.+||+.+|++||++.||++.|+.+
T Consensus 226 ~~---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 226 PP---LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred CC---CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 00 01122345688999999999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-38 Score=340.94 Aligned_cols=245 Identities=22% Similarity=0.310 Sum_probs=199.8
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~ 574 (897)
++|++.+.||+|+||+||+|... +|+.||||++.... ....+.+.+|+++|++++|+||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 46889999999999999999965 68999999986432 223456889999999999999999999999999999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~ 153 (291)
T cd05612 81 EYVPGGELFSYLRN----SGRFSNSTGLFYASEIVCALEYLHSKE---IVYRDLKPENILLDKEGHIKLTDFGFAKKLRD 153 (291)
T ss_pred eCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEEecCcchhccC
Confidence 99999999999853 346899999999999999999999988 99999999999999999999999999986532
Q ss_pred CCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccccccccccc
Q 002647 655 EGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIID 734 (897)
Q Consensus 655 ~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiD 734 (897)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+. .......
T Consensus 154 ~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~---~~~---~~i~~~~-------- 214 (291)
T cd05612 154 R-----TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF---GIY---EKILAGK-------- 214 (291)
T ss_pred C-----cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHH---HHHHhCC--------
Confidence 1 12356899999999999888999999999999999999999999653221 111 1111000
Q ss_pred chhccCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 002647 735 PVIESNISYDTLVKVAAIASMCVQPEVSHRPF-----MGEVVQA 773 (897)
Q Consensus 735 p~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPT-----m~EVl~~ 773 (897)
. .++......+.+++.+||+.||.+|++ +.|+++.
T Consensus 215 --~--~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 215 --L--EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred --c--CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 0 111122346788999999999999995 7777643
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-38 Score=356.53 Aligned_cols=262 Identities=26% Similarity=0.414 Sum_probs=205.6
Q ss_pred hCCceeeeEEeecCceEEEEEEec------CCCEEEEEEeeccc-ccchHHHHHHHHHHhhcc-CCceeeEeeeeecCCc
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILD------DGREVAVKVLKRAN-QHGGREFLAELEMLSRLH-HRNLVKLFGVCIEDNN 569 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~------~g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~-HpNIV~Llg~~~~~~~ 569 (897)
.++|.+.++||+|+||.||+|+.. .+..||||+++... ....+.|.+|+++|+++. ||||++++++|.+.+.
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~ 115 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP 115 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence 467888999999999999999853 13469999997533 233467999999999996 9999999999999999
Q ss_pred eEEEEeeccCCccccccccCCC----------------------------------------------------------
Q 002647 570 RCLVYELIHNGSLESHLHGDDK---------------------------------------------------------- 591 (897)
Q Consensus 570 ~~LV~Ey~~gGSL~~~L~~~~~---------------------------------------------------------- 591 (897)
.+|||||+++|+|.++|+....
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
T cd05105 116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK 195 (400)
T ss_pred eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence 9999999999999998864211
Q ss_pred ----------------------------------CCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEcc
Q 002647 592 ----------------------------------VNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEH 637 (897)
Q Consensus 592 ----------------------------------~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~ 637 (897)
....+++.+++.++.|+++||+|||+.+ |+||||||+|||+++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dikp~Nill~~ 272 (400)
T cd05105 196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN---CVHRDLAARNVLLAQ 272 (400)
T ss_pred hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHhEEEeC
Confidence 0134888999999999999999999887 999999999999999
Q ss_pred CCceEEeccCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhH
Q 002647 638 DFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLV 716 (897)
Q Consensus 638 ~~~vKLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv 716 (897)
++.+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||....... .+.
T Consensus 273 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~--~~~ 350 (400)
T cd05105 273 GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS--TFY 350 (400)
T ss_pred CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH--HHH
Confidence 99999999999986543222222233456788999999998899999999999999999997 999986432111 111
Q ss_pred HhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 002647 717 AWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVC 778 (897)
Q Consensus 717 ~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~ 778 (897)
... . .... ...+......+.+++.+||+.||++||++.+|++.|+.+.
T Consensus 351 ~~~----~--~~~~--------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 351 NKI----K--SGYR--------MAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred HHH----h--cCCC--------CCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 100 0 0000 0011223456889999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=333.24 Aligned_cols=263 Identities=26% Similarity=0.399 Sum_probs=209.4
Q ss_pred hCCceeeeEEeecCceEEEEEEecC-----CCEEEEEEeecc-cccchHHHHHHHHHHhhccCCceeeEeeeeec-CCce
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILDD-----GREVAVKVLKRA-NQHGGREFLAELEMLSRLHHRNLVKLFGVCIE-DNNR 570 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~~-----g~~VAVK~lk~~-~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~-~~~~ 570 (897)
.++|.+.++||+|+||.||+|...+ +..|++|+++.. .....+.+.+|+.++++++|+||+++++++.. ....
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 4678899999999999999999765 688999998753 23345678899999999999999999999876 4678
Q ss_pred EEEEeeccCCccccccccCCCC----CCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEecc
Q 002647 571 CLVYELIHNGSLESHLHGDDKV----NGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDF 646 (897)
Q Consensus 571 ~LV~Ey~~gGSL~~~L~~~~~~----~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDF 646 (897)
++++||+.+|+|.+++...... ...+++.+++.++.|++.||+|||+.+ ++||||||+|||+++++.+||+||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG---VIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCHhhEEEcCCCcEEECCC
Confidence 9999999999999998643221 146899999999999999999999887 999999999999999999999999
Q ss_pred CcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccc
Q 002647 647 GLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTT 725 (897)
Q Consensus 647 GLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~ 725 (897)
|+++...............++..|+|||++.+..++.++||||||+++||+++ |+.||+.... ..+..+....
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---~~~~~~~~~~--- 235 (280)
T cd05043 162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP---FEMAAYLKDG--- 235 (280)
T ss_pred CCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH---HHHHHHHHcC---
Confidence 99986543322222233456778999999998889999999999999999999 9999964322 2222222110
Q ss_pred cccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHhh
Q 002647 726 KEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNE 780 (897)
Q Consensus 726 ~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~~e 780 (897)
.... ........+.+++.+||+.||++||++.||++.|+.+.++
T Consensus 236 -~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 236 -YRLA----------QPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred -CCCC----------CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 0000 0111234678999999999999999999999999887643
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-38 Score=345.07 Aligned_cols=252 Identities=23% Similarity=0.331 Sum_probs=203.0
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~ 574 (897)
++|.+.+.||+|+||+||+|... +|+.||||+++... ......+.+|+++|..++|+||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 47899999999999999999965 68999999997532 234467889999999999999999999999999999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+||||+.++.+||+|||+++....
T Consensus 81 e~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~g---iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 153 (350)
T cd05573 81 EYMPGGDLMNLLIR----KDVFPEETARFYIAELVLALDSVHKLG---FIHRDIKPDNILIDADGHIKLADFGLCKKMNK 153 (350)
T ss_pred cCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEeecCCCCccCcc
Confidence 99999999999953 256999999999999999999999987 99999999999999999999999999976543
Q ss_pred CC---------------------------CcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCC
Q 002647 655 EG---------------------------NKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLS 707 (897)
Q Consensus 655 ~~---------------------------~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~ 707 (897)
.. .........||+.|+|||++.+..++.++|||||||+||||++|+.||...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~ 233 (350)
T cd05573 154 AKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSD 233 (350)
T ss_pred cCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCC
Confidence 22 011223457999999999999999999999999999999999999999754
Q ss_pred CCCCc-hhhHHhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHH
Q 002647 708 QPPGQ-ENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPF-MGEVVQA 773 (897)
Q Consensus 708 ~~~~~-~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPT-m~EVl~~ 773 (897)
..... ..+..|... +. +. ........+.+++.+|+. ||.+||+ +.|+++.
T Consensus 234 ~~~~~~~~i~~~~~~-------~~------~p--~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 234 TLQETYNKIINWKES-------LR------FP--PDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred CHHHHHHHHhccCCc-------cc------CC--CCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 32110 011111100 00 00 001124567889999997 9999999 9999764
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=329.33 Aligned_cols=255 Identities=27% Similarity=0.402 Sum_probs=204.6
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeec
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELI 577 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~ 577 (897)
.+|.+.++||+|+||.||+|..+ +++.||+|.++.. .....++.+|++++++++|+||+++++++..++..++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 35778899999999999999965 5889999998754 233467899999999999999999999999999999999999
Q ss_pred cCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCC
Q 002647 578 HNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN 657 (897)
Q Consensus 578 ~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~ 657 (897)
++++|.+++... ....+++..++.++.|+++||+|||+.+ ++||||||+|||+++++.+||+|||+++.......
T Consensus 85 ~~~~L~~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~ 159 (263)
T cd05052 85 TYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 159 (263)
T ss_pred CCCcHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCcEEeCCCcccccccccee
Confidence 999999998642 2346899999999999999999999887 99999999999999999999999999986533211
Q ss_pred cccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccccccch
Q 002647 658 KHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPV 736 (897)
Q Consensus 658 ~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~ 736 (897)
.......++..|+|||++.+..++.++|||||||++|||++ |..||..... ..+.. .+.. .
T Consensus 160 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~---~~~~~---~~~~---~-------- 221 (263)
T cd05052 160 -TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---SQVYE---LLEK---G-------- 221 (263)
T ss_pred -eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH---HHHHH---HHHC---C--------
Confidence 11112234568999999998999999999999999999998 9999864321 11111 1100 0
Q ss_pred hccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 002647 737 IESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLV 777 (897)
Q Consensus 737 l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l 777 (897)
.....+......+.+++.+||+.||++||++.|+++.|+.+
T Consensus 222 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 222 YRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 00111222345688999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=334.04 Aligned_cols=257 Identities=25% Similarity=0.422 Sum_probs=200.7
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCC----EEEEEEeecccc-cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGR----EVAVKVLKRANQ-HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCL 572 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~----~VAVK~lk~~~~-~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~L 572 (897)
++|++.+.||+|+||+||+|.+. +++ .+++|.+..... ....++..|+.++++++|+||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence 35777899999999999999964 454 477777754322 223567888889999999999999998864 55789
Q ss_pred EEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhc
Q 002647 573 VYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTA 652 (897)
Q Consensus 573 V~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~ 652 (897)
|+||+++|+|.+++... ...+++..++.|+.||+.||+|||+.+ ++||||||+|||+++++.+||+|||+++..
T Consensus 86 i~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 86 VTQLSPLGSLLDHVRQH---RDSLDPQRLLNWCVQIAKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIADFGVADLL 159 (279)
T ss_pred EEEeCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEEcCCccceec
Confidence 99999999999999632 346899999999999999999999887 999999999999999999999999999865
Q ss_pred ccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccc
Q 002647 653 LDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKT 731 (897)
Q Consensus 653 ~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~ 731 (897)
.............++..|+|||++..+.++.++||||||+++|||++ |+.||....... +.++.. .....
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~---~~~~~~----~~~~~-- 230 (279)
T cd05111 160 YPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE---VPDLLE----KGERL-- 230 (279)
T ss_pred cCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHHH----CCCcC--
Confidence 43333233344567789999999998899999999999999999998 999986543211 111111 11100
Q ss_pred cccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHh
Q 002647 732 IIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCN 779 (897)
Q Consensus 732 iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~~ 779 (897)
.. +..+...+..++.+||..||++||++.|+++.|..+.+
T Consensus 231 -~~-------~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 231 -AQ-------PQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred -CC-------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 01 11122456789999999999999999999999887654
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-38 Score=347.41 Aligned_cols=262 Identities=27% Similarity=0.433 Sum_probs=204.1
Q ss_pred CCceeeeEEeecCceEEEEEEec------CCCEEEEEEeecccc-cchHHHHHHHHHHhhc-cCCceeeEeeeeecC-Cc
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD------DGREVAVKVLKRANQ-HGGREFLAELEMLSRL-HHRNLVKLFGVCIED-NN 569 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~------~g~~VAVK~lk~~~~-~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~-~~ 569 (897)
++|++.++||+|+||.||+|... +++.||+|+++.... ...+.+.+|++++.++ +|+||++++++|... ..
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~ 86 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP 86 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence 46888999999999999999742 247899999875332 2335688899999999 899999999988654 56
Q ss_pred eEEEEeeccCCccccccccCCCC---------------------------------------------------------
Q 002647 570 RCLVYELIHNGSLESHLHGDDKV--------------------------------------------------------- 592 (897)
Q Consensus 570 ~~LV~Ey~~gGSL~~~L~~~~~~--------------------------------------------------------- 592 (897)
.+++|||+++|+|.++|......
T Consensus 87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (337)
T cd05054 87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY 166 (337)
T ss_pred EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence 78999999999999988532110
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcccccccccccccCC
Q 002647 593 NGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLA 672 (897)
Q Consensus 593 ~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~A 672 (897)
...++|..+.+++.||++||+|||+.+ |+||||||+|||+++++.+||+|||+++...............++..|+|
T Consensus 167 ~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~a 243 (337)
T cd05054 167 KEPLTLEDLISYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 243 (337)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccC
Confidence 136899999999999999999999887 99999999999999999999999999986543322222233456778999
Q ss_pred hhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccccccchhccCCCHHHHHHHHH
Q 002647 673 PEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAA 751 (897)
Q Consensus 673 PE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~ 751 (897)
||++.+..++.++|||||||+||||++ |+.||......+ .+.... . +.... ..+.....++.+
T Consensus 244 PE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~--~~~~~~----~--~~~~~--------~~~~~~~~~~~~ 307 (337)
T cd05054 244 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE--EFCRRL----K--EGTRM--------RAPEYATPEIYS 307 (337)
T ss_pred cHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH--HHHHHH----h--ccCCC--------CCCccCCHHHHH
Confidence 999999999999999999999999998 999986432211 111110 0 00000 011223356889
Q ss_pred HHHHccCCCCCCCCCHHHHHHHHHHHHh
Q 002647 752 IASMCVQPEVSHRPFMGEVVQALKLVCN 779 (897)
Q Consensus 752 Li~~CL~~dP~~RPTm~EVl~~L~~l~~ 779 (897)
|+.+||+.+|++||++.||++.|+.+..
T Consensus 308 l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 308 IMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 9999999999999999999999987754
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-38 Score=359.07 Aligned_cols=248 Identities=24% Similarity=0.366 Sum_probs=205.6
Q ss_pred CCceeeeEEeecCceEEEEEEe-cCCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~ 574 (897)
+-|.+++.||+|+.|.|-+|++ .+|+.+|||++.+.. ......+.+|+-+|+-|.|||+++|++++++..++|||.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 3467789999999999999995 589999999996542 223356789999999999999999999999999999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
||+++|.|+++|- ..++|.+.+..+++.||+.|+.|+|..+ |+||||||+|+|||.++++||+|||+|..-.+
T Consensus 92 Eyv~gGELFdylv----~kG~l~e~eaa~ff~QIi~gv~yCH~~~---icHRDLKpENlLLd~~~nIKIADFGMAsLe~~ 164 (786)
T KOG0588|consen 92 EYVPGGELFDYLV----RKGPLPEREAAHFFRQILDGVSYCHAFN---ICHRDLKPENLLLDVKNNIKIADFGMASLEVP 164 (786)
T ss_pred EecCCchhHHHHH----hhCCCCCHHHHHHHHHHHHHHHHHhhhc---ceeccCCchhhhhhcccCEeeeccceeecccC
Confidence 9999999999994 4578999999999999999999999988 99999999999999999999999999975322
Q ss_pred CCCcccccccccccccCChhhhhcCCC-CccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccc
Q 002647 655 EGNKHISTHVMGTFGYLAPEYAMTGHL-LVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTII 733 (897)
Q Consensus 655 ~~~~~~~t~~~GT~~Y~APE~l~~~~~-t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~ii 733 (897)
...-.+.+|.+.|.|||++.+.+| ..++||||+|||||.||||+.||++.+ ...+.. ....+..++
T Consensus 165 ---gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdN---ir~LLl------KV~~G~f~M- 231 (786)
T KOG0588|consen 165 ---GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDN---IRVLLL------KVQRGVFEM- 231 (786)
T ss_pred ---CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCcc---HHHHHH------HHHcCcccC-
Confidence 223456799999999999999999 489999999999999999999998322 112211 111122222
Q ss_pred cchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002647 734 DPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL 774 (897)
Q Consensus 734 Dp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L 774 (897)
+.....+..+|+.+|+..||.+|.|++||.+.-
T Consensus 232 --------Ps~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP 264 (786)
T KOG0588|consen 232 --------PSNISSEAQDLLRRMLDVDPSTRITTEEILKHP 264 (786)
T ss_pred --------CCcCCHHHHHHHHHHhccCccccccHHHHhhCc
Confidence 222334567899999999999999999998763
|
|
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=338.77 Aligned_cols=239 Identities=26% Similarity=0.295 Sum_probs=192.6
Q ss_pred EeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccCCcc
Q 002647 507 IGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSL 582 (897)
Q Consensus 507 LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~gGSL 582 (897)
||+|+||+||+|... +++.||+|+++... ......+.+|+++|++++|+||+++++++.+++..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999965 57899999997532 33345688999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCccccc
Q 002647 583 ESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIST 662 (897)
Q Consensus 583 ~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~~~t 662 (897)
.+++.. ...+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++...... ....
T Consensus 81 ~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~~~~ 151 (312)
T cd05585 81 FHHLQR----EGRFDLSRARFYTAELLCALENLHKFN---VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD--DKTN 151 (312)
T ss_pred HHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHeEECCCCcEEEEECcccccCccCC--Cccc
Confidence 999953 346899999999999999999999988 9999999999999999999999999987532221 2234
Q ss_pred ccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhccCCC
Q 002647 663 HVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESNIS 742 (897)
Q Consensus 663 ~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~ 742 (897)
...||+.|+|||++.+..++.++|||||||++|||++|+.||..... ....+....... .++
T Consensus 152 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~------~~~~~~~~~~~~------------~~~ 213 (312)
T cd05585 152 TFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV------NEMYRKILQEPL------------RFP 213 (312)
T ss_pred cccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH------HHHHHHHHcCCC------------CCC
Confidence 46799999999999999999999999999999999999999964321 111111111100 111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCC---HHHHHH
Q 002647 743 YDTLVKVAAIASMCVQPEVSHRPF---MGEVVQ 772 (897)
Q Consensus 743 ~e~~~~L~~Li~~CL~~dP~~RPT---m~EVl~ 772 (897)
......+.+++.+||+.||++||+ +.|+++
T Consensus 214 ~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 214 DGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred CcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence 223356788999999999999986 455543
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=340.00 Aligned_cols=262 Identities=25% Similarity=0.387 Sum_probs=196.2
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeecc--cccchHHHHHHHHHHhhccCCceeeEeeeeecC-----CceE
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRA--NQHGGREFLAELEMLSRLHHRNLVKLFGVCIED-----NNRC 571 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~--~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~-----~~~~ 571 (897)
+|++.++||+|+||.||+|+.. +|+.||||+++.. .......+.+|+++|++++|+||+++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 4888999999999999999954 6899999998743 223345688999999999999999999988643 2479
Q ss_pred EEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchh
Q 002647 572 LVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLART 651 (897)
Q Consensus 572 LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~ 651 (897)
+||||+. ++|.+++.. ...+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 81 lv~e~~~-~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kL~Dfg~~~~ 152 (338)
T cd07859 81 VVFELME-SDLHQVIKA----NDDLTPEHHQFFLYQLLRALKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLARV 152 (338)
T ss_pred EEEecCC-CCHHHHHHh----cccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEccCccccc
Confidence 9999995 689888843 346999999999999999999999988 99999999999999999999999999985
Q ss_pred cccCCC-cccccccccccccCChhhhhc--CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccc---
Q 002647 652 ALDEGN-KHISTHVMGTFGYLAPEYAMT--GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTT--- 725 (897)
Q Consensus 652 ~~~~~~-~~~~t~~~GT~~Y~APE~l~~--~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~--- 725 (897)
...... ........||..|+|||++.+ ..++.++|||||||++|||+||+.||...........+ ......
T Consensus 153 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~---~~~~~~~~~ 229 (338)
T cd07859 153 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLI---TDLLGTPSP 229 (338)
T ss_pred cccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHH---HHHhCCCCH
Confidence 433222 112234678999999999875 67899999999999999999999999654321111110 000000
Q ss_pred -------ccccccccc-------chhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 726 -------KEGLKTIID-------PVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 726 -------~e~l~~iiD-------p~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
.+.....++ ......+ ......+.+++.+||+.||++||++.|+++.
T Consensus 230 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 230 ETISRVRNEKARRYLSSMRKKQPVPFSQKF-PNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HHHHHhhhhhHHHHHHhhcccCCCchHHhc-CCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 000000000 0000000 0122456789999999999999999999864
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=346.22 Aligned_cols=247 Identities=27% Similarity=0.381 Sum_probs=192.5
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccc-cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeec
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQ-HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELI 577 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~-~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~ 577 (897)
+|+..++||+|+||+||+|+.. +|+.||||++..... ...+.+.+|+++|++++|+||+++++++.+.+..++||||+
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 154 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFM 154 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecC
Confidence 3455689999999999999965 689999999865432 33467899999999999999999999999999999999999
Q ss_pred cCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCC
Q 002647 578 HNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN 657 (897)
Q Consensus 578 ~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~ 657 (897)
++|+|.+.. .+.+..+..++.||++||+|||+.+ |+|||||++||||++++.+||+|||+++......
T Consensus 155 ~~~~L~~~~--------~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~- 222 (353)
T PLN00034 155 DGGSLEGTH--------IADEQFLADVARQILSGIAYLHRRH---IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM- 222 (353)
T ss_pred CCCcccccc--------cCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEcccccceeccccc-
Confidence 999987543 2567788899999999999999988 9999999999999999999999999998653221
Q ss_pred cccccccccccccCChhhhhc-----CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccccccccc
Q 002647 658 KHISTHVMGTFGYLAPEYAMT-----GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTI 732 (897)
Q Consensus 658 ~~~~t~~~GT~~Y~APE~l~~-----~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~i 732 (897)
.......||..|+|||++.. ...+.++|||||||++|||++|+.||......+...+..... . ..
T Consensus 223 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~---~-~~----- 292 (353)
T PLN00034 223 -DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAIC---M-SQ----- 292 (353)
T ss_pred -ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHh---c-cC-----
Confidence 12234578999999998743 223468999999999999999999997332221111111100 0 00
Q ss_pred ccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 733 IDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 733 iDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
..........++.+|+.+||+.||++||++.||++.
T Consensus 293 -----~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 293 -----PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred -----CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 001112234568899999999999999999999764
|
|
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-37 Score=323.93 Aligned_cols=261 Identities=26% Similarity=0.397 Sum_probs=209.6
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~ 574 (897)
++|++.+.||+|+||.||+|... +|+.||+|.++... ....+.+.+|++++++++|+|++++++++.+.+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57899999999999999999976 78999999886422 233467899999999999999999999999999999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
||+++|+|.+++.........+++.+++.++.|+++||+|||+.+ |+||||||+||+++.++.++|+|||+++....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR---IMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 999999999998654444456899999999999999999999988 99999999999999999999999999875432
Q ss_pred CCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccccccccccc
Q 002647 655 EGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIID 734 (897)
Q Consensus 655 ~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiD 734 (897)
.. .......++..|+|||++.+..++.++|||||||++|||++|+.||.... .++..+...... . ...
T Consensus 159 ~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~~~~~~~~~~--~----~~~ 226 (267)
T cd08224 159 KT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK----MNLYSLCKKIEK--C----DYP 226 (267)
T ss_pred CC--cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC----ccHHHHHhhhhc--C----CCC
Confidence 21 11223468889999999998889999999999999999999999985432 111111111100 0 000
Q ss_pred chhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 002647 735 PVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVC 778 (897)
Q Consensus 735 p~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~ 778 (897)
+.. .......+.+++.+||+.+|++||++.+|++.|+.+.
T Consensus 227 ~~~----~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 227 PLP----ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred CCC----hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 000 1123356789999999999999999999999998763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-39 Score=354.32 Aligned_cols=265 Identities=24% Similarity=0.314 Sum_probs=208.5
Q ss_pred hCCceeeeEEeecCceEEEEEE-ecCCCEEEEEEeecccccchH-HHHHHHHHHhhcc-CCceeeEeeeeecCC-ceEEE
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGR-EFLAELEMLSRLH-HRNLVKLFGVCIEDN-NRCLV 573 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~-l~~g~~VAVK~lk~~~~~~~~-~f~~Ev~iL~~L~-HpNIV~Llg~~~~~~-~~~LV 573 (897)
-++|.+.++||.|.||.||+|+ ..+|..||||++++.-....+ -=++|++.|++|+ |+|||+|.+++.+.+ .+++|
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV 88 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV 88 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence 4578889999999999999999 557899999999864433322 2468999999998 999999999999887 89999
Q ss_pred EeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcc
Q 002647 574 YELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTAL 653 (897)
Q Consensus 574 ~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~ 653 (897)
||||+. +|+++++.. +..+++.++..|+.||++||+|+|++| +.|||+||+|||+..+..+||+||||||...
T Consensus 89 fE~Md~-NLYqLmK~R---~r~fse~~irnim~QilqGL~hiHk~G---fFHRDlKPENiLi~~~~~iKiaDFGLARev~ 161 (538)
T KOG0661|consen 89 FEFMDC-NLYQLMKDR---NRLFSESDIRNIMYQILQGLAHIHKHG---FFHRDLKPENILISGNDVIKIADFGLAREVR 161 (538)
T ss_pred HHhhhh-hHHHHHhhc---CCcCCHHHHHHHHHHHHHHHHHHHhcC---cccccCChhheEecccceeEecccccccccc
Confidence 999976 999999643 578999999999999999999999999 9999999999999999999999999999763
Q ss_pred cCCCcccccccccccccCChhhhhc-CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccc-----ccc
Q 002647 654 DEGNKHISTHVMGTFGYLAPEYAMT-GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLT-----TKE 727 (897)
Q Consensus 654 ~~~~~~~~t~~~GT~~Y~APE~l~~-~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~-----~~e 727 (897)
.....|.++.|.+|.|||++.. +-|+.+.|||++|||++|+.+-+.-|-+.+..++...+.-+-.-.. ...
T Consensus 162 ---SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~ 238 (538)
T KOG0661|consen 162 ---SKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGY 238 (538)
T ss_pred ---cCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHH
Confidence 3445677889999999998764 5778999999999999999999998876554333322211100000 001
Q ss_pred ccccccc--------chhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 728 GLKTIID--------PVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 728 ~l~~iiD--------p~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
.+...+. ..+.. .-..+..+.++++.+|+..||++|||+.|.++.
T Consensus 239 ~La~~mnf~~P~~~~~~l~~-L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 239 NLASAMNFRFPQVKPSPLKD-LLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HHHHHhccCCCcCCCCChHH-hCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 1111111 11111 112256778899999999999999999999875
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=344.40 Aligned_cols=264 Identities=29% Similarity=0.428 Sum_probs=202.2
Q ss_pred eeeeEEeecCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhh--ccCCceeeEeeeeecCC----ceEEEEe
Q 002647 502 HTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSR--LHHRNLVKLFGVCIEDN----NRCLVYE 575 (897)
Q Consensus 502 ~~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~--L~HpNIV~Llg~~~~~~----~~~LV~E 575 (897)
...++||+|+||.||||.+. ++.||||++... ..+.|..|-+|.+. ++|+||++++++-.... +++||+|
T Consensus 213 ~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~ 288 (534)
T KOG3653|consen 213 QLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTE 288 (534)
T ss_pred hhHHHhhcCccceeehhhcc-CceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEee
Confidence 34578999999999999998 599999998743 34678888888776 58999999999977655 8899999
Q ss_pred eccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccC------CCcEEecCCCCCcEEEccCCceEEeccCcc
Q 002647 576 LIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDS------SPRVIHRDFKSSNILLEHDFTPKVSDFGLA 649 (897)
Q Consensus 576 y~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~g------sp~IIHrDIKpsNILLd~~~~vKLsDFGLA 649 (897)
|.++|+|.+||.. ..++|....+|+..+++||+|||+.- .|+|+|||||++||||.+|+++.|+|||||
T Consensus 289 fh~kGsL~dyL~~-----ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLA 363 (534)
T KOG3653|consen 289 FHPKGSLCDYLKA-----NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLA 363 (534)
T ss_pred eccCCcHHHHHHh-----ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecccee
Confidence 9999999999953 46999999999999999999999763 568999999999999999999999999999
Q ss_pred hhcccCCCcccccccccccccCChhhhhcC-CCC-----ccccEEechhHHHHHHhCCCCCCCCCCCCch-hh-------
Q 002647 650 RTALDEGNKHISTHVMGTFGYLAPEYAMTG-HLL-----VKSDVYSYGVVLLELLTGRKPVDLSQPPGQE-NL------- 715 (897)
Q Consensus 650 r~~~~~~~~~~~t~~~GT~~Y~APE~l~~~-~~t-----~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~-~l------- 715 (897)
..+.........-..+||.+|||||++.+. ++. .+.||||+|.|||||++...-++....++.+ -+
T Consensus 364 l~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~h 443 (534)
T KOG3653|consen 364 LRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNH 443 (534)
T ss_pred EEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCC
Confidence 887655444445558999999999998764 222 4689999999999999976555321111111 00
Q ss_pred --HHhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 002647 716 --VAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVC 778 (897)
Q Consensus 716 --v~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~ 778 (897)
++-++.+...+.....+.|..... ..+..+.+.+..||..|++.|-|+.=|.+++..+.
T Consensus 444 Pt~e~mq~~VV~kK~RP~~p~~W~~h----~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~ 504 (534)
T KOG3653|consen 444 PTLEEMQELVVRKKQRPKIPDAWRKH----AGMAVLCETIEECWDHDAEARLTAGCVEERMAELM 504 (534)
T ss_pred CCHHHHHHHHHhhccCCCChhhhhcC----ccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHh
Confidence 111222222222222222222211 34567889999999999999999999988887654
|
|
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-37 Score=329.41 Aligned_cols=258 Identities=28% Similarity=0.465 Sum_probs=206.0
Q ss_pred hCCceeeeEEeecCceEEEEEEecC------CCEEEEEEeeccc-ccchHHHHHHHHHHhhccCCceeeEeeeeecCCce
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILDD------GREVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNR 570 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~~------g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~ 570 (897)
.++|.+.+.||+|+||.||+|...+ +..||+|.+.... ......+.+|+.+|+.++|+||+++++++......
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 3578899999999999999998642 3679999987543 23345788999999999999999999999999999
Q ss_pred EEEEeeccCCccccccccCCC------CCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEe
Q 002647 571 CLVYELIHNGSLESHLHGDDK------VNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVS 644 (897)
Q Consensus 571 ~LV~Ey~~gGSL~~~L~~~~~------~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLs 644 (897)
++||||+++|+|.+++..... ....+++..++.++.|++.||.|||+.+ |+||||||+|||+++++.+||+
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK---FVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccChheEEEcCCCCEEEC
Confidence 999999999999999864321 1235789999999999999999999887 9999999999999999999999
Q ss_pred ccCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcc
Q 002647 645 DFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLL 723 (897)
Q Consensus 645 DFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~ 723 (897)
|||+++...............++..|+|||.+....++.++|||||||++|||+| |+.||..... ..+..+..
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~---~~~~~~~~--- 235 (277)
T cd05032 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN---EEVLKFVI--- 235 (277)
T ss_pred CcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH---HHHHHHHh---
Confidence 9999986544332222334456789999999988889999999999999999998 9999864332 12222111
Q ss_pred cccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 002647 724 TTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775 (897)
Q Consensus 724 ~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~ 775 (897)
. .... ..+......+.+++.+||+.+|++|||+.|+++.|+
T Consensus 236 -~-~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 236 -D-GGHL---------DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred -c-CCCC---------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 0 0000 111223457889999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=342.15 Aligned_cols=242 Identities=25% Similarity=0.346 Sum_probs=195.8
Q ss_pred eEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccCC
Q 002647 505 RIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNG 580 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~gG 580 (897)
++||+|+||.||++... +|+.||||+++... ......+.+|+++|++++|+||+++++++..++..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999954 68999999997532 233457889999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCccc
Q 002647 581 SLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHI 660 (897)
Q Consensus 581 SL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~~ 660 (897)
+|.+++.. ...+++.++..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..... ...
T Consensus 81 ~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~--~~~ 151 (328)
T cd05593 81 ELFFHLSR----ERVFSEDRTRFYGAEIVSALDYLHSGK---IVYRDLKLENLMLDKDGHIKITDFGLCKEGITD--AAT 151 (328)
T ss_pred CHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeEECCCCcEEEecCcCCccCCCc--ccc
Confidence 99988853 346899999999999999999999988 999999999999999999999999998753221 122
Q ss_pred ccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhccC
Q 002647 661 STHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESN 740 (897)
Q Consensus 661 ~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~~ 740 (897)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+. ...... +. .
T Consensus 152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~---~~~---~~~~~~--------~~----~ 213 (328)
T cd05593 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---KLF---ELILME--------DI----K 213 (328)
T ss_pred cccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH---HHH---HHhccC--------Cc----c
Confidence 23467999999999999889999999999999999999999999643211 111 111100 00 1
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 002647 741 ISYDTLVKVAAIASMCVQPEVSHRP-----FMGEVVQA 773 (897)
Q Consensus 741 ~~~e~~~~L~~Li~~CL~~dP~~RP-----Tm~EVl~~ 773 (897)
++......+.+++.+||+.||++|+ ++.|+++.
T Consensus 214 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 214 FPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 1122234678899999999999997 88888754
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-37 Score=331.63 Aligned_cols=264 Identities=23% Similarity=0.305 Sum_probs=195.0
Q ss_pred CCceeeeEEeecCceEEEEEEec--CCCEEEEEEeeccc--ccchHHHHHHHHHHhhc---cCCceeeEeeeeec-----
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD--DGREVAVKVLKRAN--QHGGREFLAELEMLSRL---HHRNLVKLFGVCIE----- 566 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~--~g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L---~HpNIV~Llg~~~~----- 566 (897)
++|++.+.||+|+||+||+|... +|+.||||+++... ......+.+|+++++++ +|+||++++++|..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 36889999999999999999863 46889999987533 22234677788887766 69999999999852
Q ss_pred CCceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEecc
Q 002647 567 DNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDF 646 (897)
Q Consensus 567 ~~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDF 646 (897)
....++||||+. ++|.+++... ....+++.++..++.|+++||+|||+.+ |+||||||+|||++.++.+||+||
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~---iiH~dlkp~Nil~~~~~~~kl~Df 154 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKV--PEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADF 154 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEcCCCCEEEccc
Confidence 346799999996 5899888542 2345899999999999999999999988 999999999999999999999999
Q ss_pred CcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCch-hhHHhhhhcccc
Q 002647 647 GLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQE-NLVAWARPLLTT 725 (897)
Q Consensus 647 GLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~-~lv~w~~~l~~~ 725 (897)
|+++..... .......||..|+|||++....++.++|||||||++|||++|+.||......+.. .+...... ...
T Consensus 155 g~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~-~~~ 230 (290)
T cd07862 155 GLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL-PGE 230 (290)
T ss_pred cceEeccCC---cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCC-CCh
Confidence 999754322 2234467899999999999889999999999999999999999999754322111 11111000 000
Q ss_pred ccc------ccccccchhc---cCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 726 KEG------LKTIIDPVIE---SNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 726 ~e~------l~~iiDp~l~---~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
.+. ....+..... .....+....+.+++.+||+.||++||++.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 231 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 000 0000000000 0011122345678999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-38 Score=334.11 Aligned_cols=257 Identities=26% Similarity=0.403 Sum_probs=202.5
Q ss_pred CceeeeEEeecCceEEEEEEec------CCCEEEEEEeeccccc-chHHHHHHHHHHhhccCCceeeEeeeeecCCceEE
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD------DGREVAVKVLKRANQH-GGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCL 572 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~------~g~~VAVK~lk~~~~~-~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~L 572 (897)
+|.+.+.||+|+||.||+|... ++..||||+++..... ..+.|.+|+.++.+++|+||+++++++...+..++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 3566789999999999999863 2478999999754332 23568899999999999999999999999999999
Q ss_pred EEeeccCCccccccccCC------------CCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCc
Q 002647 573 VYELIHNGSLESHLHGDD------------KVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFT 640 (897)
Q Consensus 573 V~Ey~~gGSL~~~L~~~~------------~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~ 640 (897)
++||+.+++|.+++.... .....+++..+++++.|++.||+|||+.+ |+||||||+|||+++++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH---VVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhheEecCCCc
Confidence 999999999999984211 11235889999999999999999999887 999999999999999999
Q ss_pred eEEeccCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhh
Q 002647 641 PKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWA 719 (897)
Q Consensus 641 vKLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~ 719 (897)
+||+|||+++...............+++.|+|||.+..+.++.++||||||+++|||++ |..||..... ..+...
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~---~~~~~~- 238 (283)
T cd05091 163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN---QDVIEM- 238 (283)
T ss_pred eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHH-
Confidence 99999999886543322222334456789999999988889999999999999999998 8888864321 111111
Q ss_pred hhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002647 720 RPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKL 776 (897)
Q Consensus 720 ~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~ 776 (897)
+.. .. ....+.+....+.+|+..||+.+|++||+++||++.|+.
T Consensus 239 --i~~-~~----------~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 239 --IRN-RQ----------VLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred --HHc-CC----------cCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 110 00 001223344568899999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-37 Score=327.79 Aligned_cols=251 Identities=27% Similarity=0.433 Sum_probs=201.9
Q ss_pred CCceeeeEEeecCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeecc
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIH 578 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~ 578 (897)
++|.+.+.||+|+||+||+|...++..+|||.++... ...++|.+|+.++++++|+||+++++++.+....++||||+.
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 3577889999999999999998877789999987543 334679999999999999999999999998888999999999
Q ss_pred CCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCc
Q 002647 579 NGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNK 658 (897)
Q Consensus 579 gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~ 658 (897)
+|+|.+++... ...+++.+++.++.||+.||+|||+.+ |+|+||||+|||+++++.+||+|||+++.......
T Consensus 83 ~~~l~~~i~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~- 155 (256)
T cd05113 83 NGCLLNYLREH---GKRFQPSQLLEMCKDVCEGMAYLESKQ---FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY- 155 (256)
T ss_pred CCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCCEEECCCccceecCCCce-
Confidence 99999998642 236899999999999999999999887 99999999999999999999999999876533221
Q ss_pred ccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccccccchh
Q 002647 659 HISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVI 737 (897)
Q Consensus 659 ~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l 737 (897)
.......++..|++||++....++.++||||||+++|||++ |+.||...... ...... .. .. ..
T Consensus 156 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~---~~~~~~---~~-~~--~~------ 220 (256)
T cd05113 156 TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS---ETVEKV---SQ-GL--RL------ 220 (256)
T ss_pred eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH---HHHHHH---hc-CC--CC------
Confidence 11122345678999999998889999999999999999999 99998643321 111111 00 00 00
Q ss_pred ccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002647 738 ESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL 774 (897)
Q Consensus 738 ~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L 774 (897)
.........+.+++.+||+.+|.+||++.+|++.|
T Consensus 221 --~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~ 255 (256)
T cd05113 221 --YRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSI 255 (256)
T ss_pred --CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhh
Confidence 00111235788999999999999999999998876
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=345.33 Aligned_cols=252 Identities=23% Similarity=0.340 Sum_probs=198.0
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~ 574 (897)
++|++.++||+|+||+||+|+.. +|+.||||+++... ......+.+|+++|+.++|+||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 47899999999999999999965 68999999997532 233456788999999999999999999999999999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 E~~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 153 (364)
T cd05599 81 EYLPGGDMMTLLMK----KDTFTEEETRFYIAETILAIDSIHKLG---YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKK 153 (364)
T ss_pred CCCCCcHHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEeecccceeccc
Confidence 99999999999853 346999999999999999999999988 99999999999999999999999999875322
Q ss_pred CCCc------------------------------------ccccccccccccCChhhhhcCCCCccccEEechhHHHHHH
Q 002647 655 EGNK------------------------------------HISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELL 698 (897)
Q Consensus 655 ~~~~------------------------------------~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELl 698 (897)
.... .......||+.|+|||++....++.++|||||||++|||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~ 233 (364)
T cd05599 154 SHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEML 233 (364)
T ss_pred cccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhh
Confidence 1100 0011246999999999999999999999999999999999
Q ss_pred hCCCCCCCCCCCCc-hhhHHhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCC---HHHHHHH
Q 002647 699 TGRKPVDLSQPPGQ-ENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPF---MGEVVQA 773 (897)
Q Consensus 699 TGk~Pfd~~~~~~~-~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPT---m~EVl~~ 773 (897)
+|+.||........ ..+..|... +. + .. .......+.+++.+|+. +|.+|++ +.|+++.
T Consensus 234 ~G~~Pf~~~~~~~~~~~i~~~~~~-------~~-~-----~~--~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 234 VGYPPFCSDNPQETYRKIINWKET-------LQ-F-----PD--EVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred cCCCCCCCCCHHHHHHHHHcCCCc-------cC-C-----CC--CCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 99999975432110 011111100 00 0 00 00112456778888986 8999998 8887653
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-37 Score=337.86 Aligned_cols=252 Identities=24% Similarity=0.318 Sum_probs=197.8
Q ss_pred CceeeeEEeecCceEEEEEEe----cCCCEEEEEEeeccc----ccchHHHHHHHHHHhhc-cCCceeeEeeeeecCCce
Q 002647 500 GFHTSRIIGEGGFGVVYRGIL----DDGREVAVKVLKRAN----QHGGREFLAELEMLSRL-HHRNLVKLFGVCIEDNNR 570 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l----~~g~~VAVK~lk~~~----~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~~~~ 570 (897)
+|++.+.||+|+||+||++.. .+++.||+|+++... ....+.+.+|+++|.++ +|+||+++++++..++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 588899999999999999985 357899999997532 22335678899999999 599999999999999999
Q ss_pred EEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcch
Q 002647 571 CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR 650 (897)
Q Consensus 571 ~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr 650 (897)
++||||+++|+|.+++.. ...+++.++..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 81 ~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nili~~~~~~kl~DfG~~~ 153 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQ----RDNFSEDEVRFYSGEIILALEHLHKLG---IVYRDIKLENILLDSEGHVVLTDFGLSK 153 (332)
T ss_pred EEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHeEECCCCCEEEeeCcCCc
Confidence 999999999999999853 346899999999999999999999988 9999999999999999999999999998
Q ss_pred hcccCCCcccccccccccccCChhhhhcC-CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccc
Q 002647 651 TALDEGNKHISTHVMGTFGYLAPEYAMTG-HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGL 729 (897)
Q Consensus 651 ~~~~~~~~~~~t~~~GT~~Y~APE~l~~~-~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l 729 (897)
....... .......||..|+|||++.+. .++.++|||||||++|||+||+.||........... .......
T Consensus 154 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~--~~~~~~~----- 225 (332)
T cd05614 154 EFLSEEK-ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSE--VSRRILK----- 225 (332)
T ss_pred cccccCC-CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHH--HHHHHhc-----
Confidence 6433222 222346799999999998865 478899999999999999999999975432211111 1111111
Q ss_pred cccccchhccCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 002647 730 KTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRP-----FMGEVVQA 773 (897)
Q Consensus 730 ~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RP-----Tm~EVl~~ 773 (897)
.++. ++......+.+++.+||+.||++|| ++.++++.
T Consensus 226 ---~~~~----~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 226 ---CDPP----FPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred ---CCCC----CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 0111 1112234577899999999999999 66676543
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=331.36 Aligned_cols=259 Identities=27% Similarity=0.451 Sum_probs=202.5
Q ss_pred hhCCceeeeEEeecCceEEEEEEecC------CCEEEEEEeeccc-ccchHHHHHHHHHHhhccCCceeeEeeeeecCCc
Q 002647 497 ATNGFHTSRIIGEGGFGVVYRGILDD------GREVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNN 569 (897)
Q Consensus 497 at~~y~~~~~LG~G~fGtVyka~l~~------g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~ 569 (897)
..++|.+.+.||+|+||.||+|.+.+ +..||+|.+.... .....+|.+|+.++++++|+||+++++++.+.+.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 34678899999999999999999753 5678999886433 2234579999999999999999999999999889
Q ss_pred eEEEEeeccCCccccccccCCC---CCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCC---ceEE
Q 002647 570 RCLVYELIHNGSLESHLHGDDK---VNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDF---TPKV 643 (897)
Q Consensus 570 ~~LV~Ey~~gGSL~~~L~~~~~---~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~---~vKL 643 (897)
.++||||+++|+|.+++..... ....+++.++++++.||+.||+|||+.+ ++||||||+|||++.++ .+||
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH---FIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchheEEEeccCCCcceEe
Confidence 9999999999999999865321 1235899999999999999999999987 99999999999998764 5999
Q ss_pred eccCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhc
Q 002647 644 SDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPL 722 (897)
Q Consensus 644 sDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l 722 (897)
+|||+++................+..|+|||++.+..++.++|||||||++|||++ |+.||...... .+....
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~---~~~~~~--- 234 (277)
T cd05036 161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ---EVMEFV--- 234 (277)
T ss_pred ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHH---
Confidence 99999986532221111122334568999999999999999999999999999997 99998743321 111110
Q ss_pred ccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 002647 723 LTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775 (897)
Q Consensus 723 ~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~ 775 (897)
.. .. ....+......+.+|+.+|++.+|++||++.||++.|+
T Consensus 235 ~~-~~----------~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 235 TG-GG----------RLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred Hc-CC----------cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 00 00 00112223356889999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=326.27 Aligned_cols=248 Identities=27% Similarity=0.393 Sum_probs=195.6
Q ss_pred eEEeecCceEEEEEEec-CCCEEEEEEeeccc-ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccCCcc
Q 002647 505 RIIGEGGFGVVYRGILD-DGREVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSL 582 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~gGSL 582 (897)
+.||+|+||.||+|+.. +++.||+|.+.... ......|.+|++++++++|+||++++++|......++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 36999999999999964 78999999886432 23346799999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCccccc
Q 002647 583 ESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIST 662 (897)
Q Consensus 583 ~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~~~t 662 (897)
.+++.. ....+++.+++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++............
T Consensus 81 ~~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 154 (252)
T cd05084 81 LTFLRT---EGPRLKVKELIQMVENAAAGMEYLESKH---CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGG 154 (252)
T ss_pred HHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEEcCCCcEEECccccCcccccccccccCC
Confidence 999853 2346899999999999999999999887 9999999999999999999999999987543211111111
Q ss_pred ccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccccccchhccCC
Q 002647 663 HVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESNI 741 (897)
Q Consensus 663 ~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~ 741 (897)
....+..|+|||.+.++.++.++||||||+++|||++ |..||+..... ....... . ......
T Consensus 155 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~---~~~~~~~----~----------~~~~~~ 217 (252)
T cd05084 155 MKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ---QTREAIE----Q----------GVRLPC 217 (252)
T ss_pred CCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH---HHHHHHH----c----------CCCCCC
Confidence 1223457999999998899999999999999999998 88888643211 1111000 0 000011
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 002647 742 SYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775 (897)
Q Consensus 742 ~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~ 775 (897)
+......+.+++.+|++.+|++||++.||.+.|+
T Consensus 218 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 218 PELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 2223456889999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=327.46 Aligned_cols=260 Identities=25% Similarity=0.386 Sum_probs=208.1
Q ss_pred CCceeeeEEeecCceEEEEEEe-cCCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~ 574 (897)
++|++.+.||+|+||.||+|.. .+++.+|||.+.... .....++.+|+++++.++|+||+++++++.+++..++||
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4677889999999999999995 478999999886432 223457889999999999999999999999999999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
||+++++|.+++.........+++.+++.++.||++||.|||+.+ |+|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 999999999988643333457899999999999999999999988 99999999999999999999999999876432
Q ss_pred CCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccccccccccc
Q 002647 655 EGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIID 734 (897)
Q Consensus 655 ~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiD 734 (897)
.. .......|+..|+|||++.+..++.++||||||+++|||++|..||...... ...+.... .....
T Consensus 159 ~~--~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~-------~~~~~ 225 (267)
T cd08229 159 KT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LYSLCKKI-------EQCDY 225 (267)
T ss_pred CC--cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch----HHHHhhhh-------hcCCC
Confidence 21 1122356889999999999888999999999999999999999998643211 11111111 11111
Q ss_pred chhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 002647 735 PVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLV 777 (897)
Q Consensus 735 p~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l 777 (897)
+.. ........+.+++.+||+.||++||||.+|++.++++
T Consensus 226 ~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 226 PPL---PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred CCC---CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 111 1112345688999999999999999999999998865
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-37 Score=332.90 Aligned_cols=265 Identities=22% Similarity=0.317 Sum_probs=199.0
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc-ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
++|.+.++||+|+||+||+|..+ +++.||+|+++... ......+.+|++++++++|+||+++++++..++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 56889999999999999999965 68899999987533 22345788999999999999999999999998899999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
+++ +|.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++......
T Consensus 85 ~~~-~l~~~l~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~ 157 (288)
T cd07871 85 LDS-DLKQYLDNC---GNLMSMHNVKIFMFQLLRGLSYCHKRK---ILHRDLKPQNLLINEKGELKLADFGLARAKSVPT 157 (288)
T ss_pred CCc-CHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEECcCcceeeccCCC
Confidence 975 898888532 345789999999999999999999887 9999999999999999999999999987542211
Q ss_pred CcccccccccccccCChhhhhc-CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhh--------hhcccccc
Q 002647 657 NKHISTHVMGTFGYLAPEYAMT-GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWA--------RPLLTTKE 727 (897)
Q Consensus 657 ~~~~~t~~~GT~~Y~APE~l~~-~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~--------~~l~~~~e 727 (897)
.......++..|+|||++.+ ..++.++|||||||++|||+||+.||......+....+... +......+
T Consensus 158 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07871 158 --KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNE 235 (288)
T ss_pred --ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccch
Confidence 12234568999999998875 56789999999999999999999999754332211111000 00000000
Q ss_pred cccccccchhcc----CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 728 GLKTIIDPVIES----NISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 728 ~l~~iiDp~l~~----~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
.......+.... ........+..+++.+||+.||.+|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 236 EFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred hhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 111111111000 000112345679999999999999999999975
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=341.93 Aligned_cols=242 Identities=24% Similarity=0.341 Sum_probs=195.1
Q ss_pred eEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccCC
Q 002647 505 RIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNG 580 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~gG 580 (897)
++||+|+||.||++... +|..||+|+++... ......+.+|++++++++|+||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 47999999999999964 68999999997532 233456788999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCccc
Q 002647 581 SLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHI 660 (897)
Q Consensus 581 SL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~~ 660 (897)
+|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 ~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~--~~ 151 (323)
T cd05595 81 ELFFHLSR----ERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--AT 151 (323)
T ss_pred cHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEEcCCCCEEecccHHhccccCCC--Cc
Confidence 99988843 346899999999999999999999988 9999999999999999999999999987532221 12
Q ss_pred ccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhccC
Q 002647 661 STHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESN 740 (897)
Q Consensus 661 ~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~~ 740 (897)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. .... ...... . .
T Consensus 152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~---~~~~---~~~~~~--------~----~ 213 (323)
T cd05595 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---RLFE---LILMEE--------I----R 213 (323)
T ss_pred cccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH---HHHH---HHhcCC--------C----C
Confidence 23457999999999999999999999999999999999999999643221 1110 000000 0 0
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 002647 741 ISYDTLVKVAAIASMCVQPEVSHRP-----FMGEVVQA 773 (897)
Q Consensus 741 ~~~e~~~~L~~Li~~CL~~dP~~RP-----Tm~EVl~~ 773 (897)
++......+.+++.+||+.||++|+ ++.++++.
T Consensus 214 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 214 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 1122335678999999999999998 78887653
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-37 Score=335.89 Aligned_cols=263 Identities=27% Similarity=0.404 Sum_probs=205.7
Q ss_pred hCCceeeeEEeecCceEEEEEEec--------CCCEEEEEEeeccc-ccchHHHHHHHHHHhhc-cCCceeeEeeeeecC
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILD--------DGREVAVKVLKRAN-QHGGREFLAELEMLSRL-HHRNLVKLFGVCIED 567 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~--------~g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~ 567 (897)
.++|.+.+.||+|+||.||++... ++..+|+|.++... .....++.+|+++++++ +|+||++++++|...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 357899999999999999999852 23569999997542 33345788999999999 799999999999999
Q ss_pred CceEEEEeeccCCccccccccCCC------------CCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEE
Q 002647 568 NNRCLVYELIHNGSLESHLHGDDK------------VNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILL 635 (897)
Q Consensus 568 ~~~~LV~Ey~~gGSL~~~L~~~~~------------~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILL 635 (897)
+..++||||+++|+|.++|..... ....+++.++++++.|++.||+|||+.+ ++||||||+|||+
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill 173 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLV 173 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHHheEE
Confidence 999999999999999999965321 1235899999999999999999999887 9999999999999
Q ss_pred ccCCceEEeccCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchh
Q 002647 636 EHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQEN 714 (897)
Q Consensus 636 d~~~~vKLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~ 714 (897)
+.++.+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |+.||..... ..
T Consensus 174 ~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~---~~ 250 (307)
T cd05098 174 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV---EE 250 (307)
T ss_pred cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH---HH
Confidence 9999999999999875432211111122234568999999998889999999999999999998 8888854321 11
Q ss_pred hHHhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHhh
Q 002647 715 LVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNE 780 (897)
Q Consensus 715 lv~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~~e 780 (897)
+.. .+. .. .....+......+.+|+.+||+.+|++||++.||++.|+.+...
T Consensus 251 ~~~---~~~-~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 251 LFK---LLK-EG----------HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred HHH---HHH-cC----------CCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 111 000 00 00011223345778899999999999999999999999887543
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=362.38 Aligned_cols=259 Identities=24% Similarity=0.306 Sum_probs=206.7
Q ss_pred HHhhCCceeeeEEeecCceEEEEEEe-cCCCEEEEEEeeccc--ccchHHHHHHHHHHhhccCCceeeEeeeeecCC---
Q 002647 495 EKATNGFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRAN--QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDN--- 568 (897)
Q Consensus 495 ~~at~~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~--- 568 (897)
....++|.+.++||+|+||+||+|.. .+|+.||||++.... ......+.+|+.+|..++|+|++++.+.+...+
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 34567899999999999999999985 478999999986532 333456889999999999999999988775432
Q ss_pred -----ceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEE
Q 002647 569 -----NRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKV 643 (897)
Q Consensus 569 -----~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKL 643 (897)
..++||||+++|+|.++|+........+++..+..++.|++.||.|||+.+ |+||||||+||||+.++.+||
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~---IiHrDLKP~NILl~~~~~vkL 184 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH---MIHRDIKSANILLCSNGLVKL 184 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEeCCCCEEE
Confidence 257999999999999999754444567999999999999999999999887 999999999999999999999
Q ss_pred eccCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcc
Q 002647 644 SDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLL 723 (897)
Q Consensus 644 sDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~ 723 (897)
+|||+++...............||+.|+|||++.+..++.++|||||||+||||++|+.||..... ........
T Consensus 185 ~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~------~~~~~~~~ 258 (496)
T PTZ00283 185 GDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM------EEVMHKTL 258 (496)
T ss_pred EecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHh
Confidence 999999865432222333456799999999999999999999999999999999999999964321 11111111
Q ss_pred cccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 724 TTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 724 ~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
.. ..+ ..+......+.+++..||+.||.+||++.|+++.
T Consensus 259 ~~------~~~-----~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 259 AG------RYD-----PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred cC------CCC-----CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 10 000 1122234568899999999999999999999864
|
|
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-37 Score=329.08 Aligned_cols=268 Identities=28% Similarity=0.392 Sum_probs=203.7
Q ss_pred ceeeeEEeecCceEEEEEEe-----cCCCEEEEEEeecccc-cchHHHHHHHHHHhhccCCceeeEeeeeecC--CceEE
Q 002647 501 FHTSRIIGEGGFGVVYRGIL-----DDGREVAVKVLKRANQ-HGGREFLAELEMLSRLHHRNLVKLFGVCIED--NNRCL 572 (897)
Q Consensus 501 y~~~~~LG~G~fGtVyka~l-----~~g~~VAVK~lk~~~~-~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~--~~~~L 572 (897)
|...+.||+|+||+||++.. .++..||+|.++.... .....|.+|+++|++++|+||+++++++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 37889999999999988653 3578899999975432 3446788999999999999999999998754 35789
Q ss_pred EEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhc
Q 002647 573 VYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTA 652 (897)
Q Consensus 573 V~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~ 652 (897)
||||+++|+|.+++.. ..+++.+++.++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++..
T Consensus 86 v~e~~~~~~l~~~~~~-----~~l~~~~~~~i~~~l~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 157 (283)
T cd05080 86 IMEYVPLGSLRDYLPK-----HKLNLAQLLLFAQQICEGMAYLHSQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAV 157 (283)
T ss_pred EecCCCCCCHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccChheEEEcCCCcEEEeeccccccc
Confidence 9999999999999853 35999999999999999999999987 999999999999999999999999999865
Q ss_pred ccCCCc-ccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccc
Q 002647 653 LDEGNK-HISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKT 731 (897)
Q Consensus 653 ~~~~~~-~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~ 731 (897)
...... .......++..|+|||++....++.++||||||+++|||+||+.|+...... ......+...... ...+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~-~~~~~~ 235 (283)
T cd05080 158 PEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKK-FEEMIGPKQGQMT-VVRLIE 235 (283)
T ss_pred CCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcch-hhhhhcccccccc-hhhhhh
Confidence 332211 1122234567799999998888999999999999999999999998643221 1111111110000 011111
Q ss_pred cccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 002647 732 IIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVC 778 (897)
Q Consensus 732 iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~ 778 (897)
+++.......+......+.+|+.+||+.+|++||++.+|++.|+.+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 236 LLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 11111111122334567899999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-37 Score=345.83 Aligned_cols=252 Identities=23% Similarity=0.316 Sum_probs=195.6
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEe
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYE 575 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~E 575 (897)
.|...+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|+++|++++|+||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5888999999999999999954 68899999997532 2334578899999999999999999999999999999999
Q ss_pred eccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccC
Q 002647 576 LIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655 (897)
Q Consensus 576 y~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~ 655 (897)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+||||+.++.+||+|||+++.....
T Consensus 82 ~~~gg~L~~~l~~----~~~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~ 154 (381)
T cd05626 82 YIPGGDMMSLLIR----MEVFPEVLARFYIAELTLAIESVHKMG---FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWT 154 (381)
T ss_pred cCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCcHHHEEECCCCCEEEeeCcCCcccccc
Confidence 9999999999853 346889999999999999999999988 999999999999999999999999997532110
Q ss_pred CC---------------------------------------------cccccccccccccCChhhhhcCCCCccccEEec
Q 002647 656 GN---------------------------------------------KHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSY 690 (897)
Q Consensus 656 ~~---------------------------------------------~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSf 690 (897)
.. ........||..|+|||++.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (381)
T cd05626 155 HNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSV 234 (381)
T ss_pred cccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeeh
Confidence 00 001123579999999999998889999999999
Q ss_pred hhHHHHHHhCCCCCCCCCCCCc-hhhHHhhhhcccccccccccccchhccCCCHHHHHHHHHHHHH--ccCCCCCCCCCH
Q 002647 691 GVVLLELLTGRKPVDLSQPPGQ-ENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASM--CVQPEVSHRPFM 767 (897)
Q Consensus 691 GvIL~ELlTGk~Pfd~~~~~~~-~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~--CL~~dP~~RPTm 767 (897)
||++|||+||+.||........ .....|... +. ... ......++.+++.+ |+..++..|+++
T Consensus 235 G~il~elltG~~Pf~~~~~~~~~~~i~~~~~~-------~~------~~~--~~~~s~~~~dli~~ll~~~~~~~~R~~~ 299 (381)
T cd05626 235 GVILFEMLVGQPPFLAPTPTETQLKVINWENT-------LH------IPP--QVKLSPEAVDLITKLCCSAEERLGRNGA 299 (381)
T ss_pred hhHHHHHHhCCCCCcCCCHHHHHHHHHccccc-------cC------CCC--CCCCCHHHHHHHHHHccCcccccCCCCH
Confidence 9999999999999975432111 111111100 00 000 00112345567766 666677779999
Q ss_pred HHHHHH
Q 002647 768 GEVVQA 773 (897)
Q Consensus 768 ~EVl~~ 773 (897)
.|+++.
T Consensus 300 ~~~l~h 305 (381)
T cd05626 300 DDIKAH 305 (381)
T ss_pred HHHhcC
Confidence 999764
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-37 Score=335.08 Aligned_cols=262 Identities=26% Similarity=0.419 Sum_probs=206.5
Q ss_pred hCCceeeeEEeecCceEEEEEEec--------CCCEEEEEEeeccc-ccchHHHHHHHHHHhhc-cCCceeeEeeeeecC
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILD--------DGREVAVKVLKRAN-QHGGREFLAELEMLSRL-HHRNLVKLFGVCIED 567 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~--------~g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~ 567 (897)
.++|.+.+.||+|+||.||+|+.. ++..||+|.++... ....+++.+|+.+++.+ +|+||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 456888899999999999999741 24579999987532 33446789999999999 899999999999999
Q ss_pred CceEEEEeeccCCccccccccCCC------------CCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEE
Q 002647 568 NNRCLVYELIHNGSLESHLHGDDK------------VNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILL 635 (897)
Q Consensus 568 ~~~~LV~Ey~~gGSL~~~L~~~~~------------~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILL 635 (897)
...++||||+++|+|.++|..... ....+++.+++.++.||++||+|||+.+ |+||||||+|||+
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nili 170 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK---CIHRDLAARNVLV 170 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC---eeecccccceEEE
Confidence 999999999999999999865321 1235889999999999999999999987 9999999999999
Q ss_pred ccCCceEEeccCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchh
Q 002647 636 EHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQEN 714 (897)
Q Consensus 636 d~~~~vKLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~ 714 (897)
++++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||..... ..
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---~~ 247 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV---EE 247 (304)
T ss_pred cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH---HH
Confidence 9999999999999986543222222233446678999999998889999999999999999998 7888854321 11
Q ss_pred hHHhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHh
Q 002647 715 LVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCN 779 (897)
Q Consensus 715 lv~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~~ 779 (897)
+ ...+.. .. ....+......+.+++.+||+.+|++||++.||++.|+.+..
T Consensus 248 ~---~~~~~~-~~----------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~ 298 (304)
T cd05101 248 L---FKLLKE-GH----------RMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT 298 (304)
T ss_pred H---HHHHHc-CC----------cCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence 1 111110 00 001122344568889999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-37 Score=327.02 Aligned_cols=256 Identities=26% Similarity=0.412 Sum_probs=197.2
Q ss_pred eeeeEEeecCceEEEEEEecCC-C--EEEEEEeecc--cccchHHHHHHHHHHhhccCCceeeEeeeeecC------Cce
Q 002647 502 HTSRIIGEGGFGVVYRGILDDG-R--EVAVKVLKRA--NQHGGREFLAELEMLSRLHHRNLVKLFGVCIED------NNR 570 (897)
Q Consensus 502 ~~~~~LG~G~fGtVyka~l~~g-~--~VAVK~lk~~--~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~------~~~ 570 (897)
.+.++||+|+||.||+|.+.++ . .||||.++.. .....+.|.+|++++++++|+||+++++++... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 4568999999999999997643 3 5899988753 233346789999999999999999999987532 246
Q ss_pred EEEEeeccCCccccccccCC--CCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCc
Q 002647 571 CLVYELIHNGSLESHLHGDD--KVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGL 648 (897)
Q Consensus 571 ~LV~Ey~~gGSL~~~L~~~~--~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGL 648 (897)
++||||+++|+|.+++.... .....+++..++.++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS---FIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhheEEcCCCCEEECCCCc
Confidence 89999999999998874322 12345899999999999999999999887 99999999999999999999999999
Q ss_pred chhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccc
Q 002647 649 ARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKE 727 (897)
Q Consensus 649 Ar~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e 727 (897)
++...............++..|+|||++....++.++||||||+++|||++ |+.||..... ..+... ....+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~---~~~~~~----~~~~~ 231 (272)
T cd05075 159 SKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN---SEIYDY----LRQGN 231 (272)
T ss_pred ccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHH----HHcCC
Confidence 986533222111223346778999999999899999999999999999999 8888864321 111111 11111
Q ss_pred cccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 002647 728 GLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLV 777 (897)
Q Consensus 728 ~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l 777 (897)
.. .........+.+++.+||+.||++||++.||++.|+.+
T Consensus 232 ~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 232 RL----------KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CC----------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 10 01112335678999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-37 Score=339.53 Aligned_cols=241 Identities=28% Similarity=0.405 Sum_probs=193.9
Q ss_pred eEEeecCceEEEEEEe----cCCCEEEEEEeeccc----ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 505 RIIGEGGFGVVYRGIL----DDGREVAVKVLKRAN----QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l----~~g~~VAVK~lk~~~----~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
++||+|+||.||++.. .+++.||||+++... ......+.+|+++|++++|+||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 6899999999999985 357899999997532 22335678899999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
+++|+|.+++.. .+.+.+..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (323)
T cd05584 82 LSGGELFMHLER----EGIFMEDTACFYLSEISLALEHLHQQG---IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG 154 (323)
T ss_pred CCCchHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEeeCcCCeecccCC
Confidence 999999999853 346888999999999999999999988 9999999999999999999999999987533222
Q ss_pred CcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccch
Q 002647 657 NKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPV 736 (897)
Q Consensus 657 ~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~ 736 (897)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .. ...+....
T Consensus 155 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~---~~---~~~~~~~~---------- 216 (323)
T cd05584 155 --TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK---KT---IDKILKGK---------- 216 (323)
T ss_pred --CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH---HH---HHHHHcCC----------
Confidence 1223457999999999999888999999999999999999999999743211 11 11111100
Q ss_pred hccCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 002647 737 IESNISYDTLVKVAAIASMCVQPEVSHRP-----FMGEVVQ 772 (897)
Q Consensus 737 l~~~~~~e~~~~L~~Li~~CL~~dP~~RP-----Tm~EVl~ 772 (897)
. .++......+.+++.+||+.||++|| ++.++++
T Consensus 217 ~--~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 217 L--NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred C--CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 0 11122234678999999999999999 7777755
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=324.12 Aligned_cols=264 Identities=27% Similarity=0.347 Sum_probs=206.2
Q ss_pred CCceeeeEEeecCceEEEEEE-ecCCCEEEEEEeeccccc--chHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEe
Q 002647 499 NGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQH--GGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYE 575 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~-l~~g~~VAVK~lk~~~~~--~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~E 575 (897)
.+|...++||+|.||.||+|+ .++|+.||||+++..+.. ......+|++.|+.++|+||+.|+++|-..+...||+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 457778899999999999999 457999999999865433 23568899999999999999999999999999999999
Q ss_pred eccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccC
Q 002647 576 LIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655 (897)
Q Consensus 576 y~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~ 655 (897)
||+. +|+..|+. ....|+..++..++.++++||+|||.+. |+||||||.|+|++++|.+||+|||+|+.+...
T Consensus 82 fm~t-dLe~vIkd---~~i~l~pa~iK~y~~m~LkGl~y~H~~~---IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p 154 (318)
T KOG0659|consen 82 FMPT-DLEVVIKD---KNIILSPADIKSYMLMTLKGLAYCHSKW---ILHRDLKPNNLLISSDGQLKIADFGLARFFGSP 154 (318)
T ss_pred eccc-cHHHHhcc---cccccCHHHHHHHHHHHHHHHHHHHhhh---hhcccCCccceEEcCCCcEEeecccchhccCCC
Confidence 9976 89999963 3567999999999999999999999998 999999999999999999999999999987543
Q ss_pred CCcccccccccccccCChhhhhcC-CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccc----cccccc
Q 002647 656 GNKHISTHVMGTFGYLAPEYAMTG-HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLT----TKEGLK 730 (897)
Q Consensus 656 ~~~~~~t~~~GT~~Y~APE~l~~~-~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~----~~e~l~ 730 (897)
.. ..+..+-|..|.|||.+.+. .|+...||||.|||+.||+-|.+-|.+...-++...+ .+.+-. ....+.
T Consensus 155 ~~--~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~I--f~~LGTP~~~~WP~~~ 230 (318)
T KOG0659|consen 155 NR--IQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKI--FRALGTPTPDQWPEMT 230 (318)
T ss_pred Cc--ccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHH--HHHcCCCCcccCcccc
Confidence 32 33444778999999998864 6889999999999999999988877655433322222 111100 001111
Q ss_pred cccc--------chhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 731 TIID--------PVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 731 ~iiD--------p~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
.+-| ......+-..+....++++..++..||.+|.++.|++++
T Consensus 231 ~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 231 SLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred ccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 1111 111111222344556899999999999999999998764
|
|
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-37 Score=341.73 Aligned_cols=200 Identities=28% Similarity=0.484 Sum_probs=174.4
Q ss_pred hCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc-ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEe
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYE 575 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~E 575 (897)
.++|++.++||+|+||.||++... ++..+|+|+++... .....++.+|+++|++++|+||++++++|.+++..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 468999999999999999999976 68889999887542 2334678999999999999999999999999999999999
Q ss_pred eccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccC
Q 002647 576 LIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655 (897)
Q Consensus 576 y~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~ 655 (897)
|+++|+|.+++.. ...+++..+..++.|+++||.|||+.+ +|+||||||+|||+++++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~----~~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 84 HMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred cCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh
Confidence 9999999999953 346899999999999999999999742 3999999999999999999999999998754322
Q ss_pred CCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCC
Q 002647 656 GNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLS 707 (897)
Q Consensus 656 ~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~ 707 (897)
......|+..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 158 ----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 205 (333)
T cd06650 158 ----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP 205 (333)
T ss_pred ----ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 122356899999999999888999999999999999999999999743
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-37 Score=329.24 Aligned_cols=266 Identities=29% Similarity=0.401 Sum_probs=202.2
Q ss_pred CCceeeeEEeecCceEEEEEEec-----CCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeec--CCceE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-----DGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIE--DNNRC 571 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-----~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~--~~~~~ 571 (897)
..|++.+.||+|+||+||++..+ ++..||||+++.......+.|.+|+++|++++|+||+++++++.. ....+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 46788899999999999999842 578999999987665556789999999999999999999998754 34678
Q ss_pred EEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchh
Q 002647 572 LVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLART 651 (897)
Q Consensus 572 LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~ 651 (897)
+||||+++|+|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+|||+++++.+||+|||+++.
T Consensus 84 lv~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~~l~~aL~~LH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~ 157 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKH---RERLDHRKLLLYASQICKGMEYLGSKR---YVHRDLATRNILVESENRVKIGDFGLTKV 157 (284)
T ss_pred EEEEecCCCCHHHHHHhc---CcCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHhhEEECCCCeEEECCCccccc
Confidence 999999999999999532 346899999999999999999999988 99999999999999999999999999986
Q ss_pred cccCCCcc-cccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccc---
Q 002647 652 ALDEGNKH-ISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKE--- 727 (897)
Q Consensus 652 ~~~~~~~~-~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e--- 727 (897)
........ ......++..|+|||++.+..++.++||||||+++|||++|..++..... . |.........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~----~---~~~~~~~~~~~~~ 230 (284)
T cd05081 158 LPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPA----E---FMRMMGNDKQGQM 230 (284)
T ss_pred ccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcch----h---hhhhccccccccc
Confidence 54322211 11122344569999999988899999999999999999998876532211 0 0000000000
Q ss_pred ---cccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 002647 728 ---GLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLV 777 (897)
Q Consensus 728 ---~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l 777 (897)
.+.++++..............+.+|+.+||+.+|++|||+.||++.|+.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 231 IVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred chHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 00001111111111223345688999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-37 Score=345.48 Aligned_cols=252 Identities=23% Similarity=0.324 Sum_probs=196.0
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~ 574 (897)
++|.+.++||+|+||+||++... +|+.||||++.... ....+.+.+|+++|++++|+||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 47889999999999999999854 78999999986532 223456888999999999999999999999999999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 E~~~gg~L~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~ 153 (377)
T cd05629 81 EFLPGGDLMTMLIK----YDTFSEDVTRFYMAECVLAIEAVHKLG---FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHK 153 (377)
T ss_pred eCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEEeeccccccccc
Confidence 99999999999853 346889999999999999999999988 99999999999999999999999999863221
Q ss_pred CCCc---------------------------------------------ccccccccccccCChhhhhcCCCCccccEEe
Q 002647 655 EGNK---------------------------------------------HISTHVMGTFGYLAPEYAMTGHLLVKSDVYS 689 (897)
Q Consensus 655 ~~~~---------------------------------------------~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwS 689 (897)
.... .......||+.|+|||++.+..++.++||||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS 233 (377)
T cd05629 154 QHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWS 233 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEe
Confidence 0000 0001246999999999999999999999999
Q ss_pred chhHHHHHHhCCCCCCCCCCCCc-hhhHHhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCC---C
Q 002647 690 YGVVLLELLTGRKPVDLSQPPGQ-ENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHR---P 765 (897)
Q Consensus 690 fGvIL~ELlTGk~Pfd~~~~~~~-~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~R---P 765 (897)
|||+||||+||+.||......+. ..+..|... +. + .. .......+.+++.+|+. +|.+| +
T Consensus 234 lGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~-------~~-~-----p~--~~~~s~~~~dli~~lL~-~~~~r~~r~ 297 (377)
T cd05629 234 LGAIMFECLIGWPPFCSENSHETYRKIINWRET-------LY-F-----PD--DIHLSVEAEDLIRRLIT-NAENRLGRG 297 (377)
T ss_pred cchhhhhhhcCCCCCCCCCHHHHHHHHHccCCc-------cC-C-----CC--CCCCCHHHHHHHHHHhc-CHhhcCCCC
Confidence 99999999999999965332111 011111110 00 0 00 00122457789999997 66665 5
Q ss_pred CHHHHHHH
Q 002647 766 FMGEVVQA 773 (897)
Q Consensus 766 Tm~EVl~~ 773 (897)
++.|+++.
T Consensus 298 ~~~~~l~h 305 (377)
T cd05629 298 GAHEIKSH 305 (377)
T ss_pred CHHHHhcC
Confidence 99888764
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-37 Score=325.50 Aligned_cols=257 Identities=28% Similarity=0.463 Sum_probs=203.7
Q ss_pred hCCceeeeEEeecCceEEEEEEec-CCC---EEEEEEeeccc-ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEE
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILD-DGR---EVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCL 572 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~-~g~---~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~L 572 (897)
.++|+..+.||+|+||.||+|+.. ++. .+|+|.++... ....+++.+|++++++++|+|++++.+++...+..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 457888899999999999999975 333 69999987542 3334678999999999999999999999999999999
Q ss_pred EEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhc
Q 002647 573 VYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTA 652 (897)
Q Consensus 573 V~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~ 652 (897)
||||+++++|.+++.. ....+++.+++.++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||++...
T Consensus 84 v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 157 (268)
T cd05063 84 ITEYMENGALDKYLRD---HDGEFSSYQLVGMLRGIAAGMKYLSDMN---YVHRDLAARNILVNSNLECKVSDFGLSRVL 157 (268)
T ss_pred EEEcCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEEcCCCcEEECCCccceec
Confidence 9999999999999853 2356899999999999999999999887 999999999999999999999999998765
Q ss_pred ccCCCccc-ccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhccccccccc
Q 002647 653 LDEGNKHI-STHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLK 730 (897)
Q Consensus 653 ~~~~~~~~-~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~ 730 (897)
........ ......+..|+|||++....++.++|||||||++|||++ |+.||..... ..+... +.. ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~---~~~~~~---i~~-~~--- 227 (268)
T cd05063 158 EDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN---HEVMKA---IND-GF--- 227 (268)
T ss_pred ccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH---HHHHHH---Hhc-CC---
Confidence 33222111 111223457999999998889999999999999999998 9999964321 111111 100 00
Q ss_pred ccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 002647 731 TIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLV 777 (897)
Q Consensus 731 ~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l 777 (897)
......+....+.+++.+||+.+|++||++.+|++.|+++
T Consensus 228 -------~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 228 -------RLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred -------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0011123345688999999999999999999999999765
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-37 Score=324.19 Aligned_cols=253 Identities=29% Similarity=0.453 Sum_probs=202.5
Q ss_pred CCceeeeEEeecCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeecc
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIH 578 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~ 578 (897)
++|++.++||+|+||.||+|..+++..||+|.++.... ..++|.+|++++++++|+|++++++++.+ ...++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~ 83 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVTEYMS 83 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECC-CCcEEEEEecC
Confidence 46788899999999999999988888999999875433 34679999999999999999999998854 56799999999
Q ss_pred CCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCc
Q 002647 579 NGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNK 658 (897)
Q Consensus 579 gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~ 658 (897)
+++|.++++.. ....+++.+++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++........
T Consensus 84 ~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~- 157 (260)
T cd05070 84 KGSLLDFLKDG--EGRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY- 157 (260)
T ss_pred CCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEEeCCceEEeCCceeeeeccCccc-
Confidence 99999999642 2345899999999999999999999987 99999999999999999999999999976432211
Q ss_pred ccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccccccchh
Q 002647 659 HISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVI 737 (897)
Q Consensus 659 ~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l 737 (897)
.......++..|+|||++....++.++||||||+++|||++ |+.||..... .....+... . .
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~---~~~~~~~~~----~----------~ 220 (260)
T cd05070 158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN---REVLEQVER----G----------Y 220 (260)
T ss_pred ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH---HHHHHHHHc----C----------C
Confidence 11122345678999999988889999999999999999999 8899864321 111111110 0 0
Q ss_pred ccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002647 738 ESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKL 776 (897)
Q Consensus 738 ~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~ 776 (897)
....+.+....+.+|+.+|++.+|++||++.++.+.|+.
T Consensus 221 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 221 RMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 001122334568899999999999999999999988864
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-37 Score=332.46 Aligned_cols=260 Identities=27% Similarity=0.412 Sum_probs=202.9
Q ss_pred CCceeeeEEeecCceEEEEEEecC-CC--EEEEEEeeccc-ccchHHHHHHHHHHhhc-cCCceeeEeeeeecCCceEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILDD-GR--EVAVKVLKRAN-QHGGREFLAELEMLSRL-HHRNLVKLFGVCIEDNNRCLV 573 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~~-g~--~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~~~~~LV 573 (897)
++|++.++||+|+||.||+|..++ +. .+++|.++... ....+.|.+|+++++++ +|+||+++++++.+.+..++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 578899999999999999999753 33 47888887432 23346789999999999 799999999999998999999
Q ss_pred EeeccCCccccccccCCC------------CCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCce
Q 002647 574 YELIHNGSLESHLHGDDK------------VNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTP 641 (897)
Q Consensus 574 ~Ey~~gGSL~~~L~~~~~------------~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~v 641 (897)
+||+++|+|.++++.... ....+++..++.++.|++.||+|||+.+ |+||||||+|||+++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ---FIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCcCCcceEEECCCCeE
Confidence 999999999999964321 1135889999999999999999999887 9999999999999999999
Q ss_pred EEeccCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhh
Q 002647 642 KVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWAR 720 (897)
Q Consensus 642 KLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~ 720 (897)
||+|||++...... ........+..|+|||++....++.++|||||||++|||++ |+.||..... .++...
T Consensus 159 kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~---~~~~~~-- 230 (297)
T cd05089 159 KIADFGLSRGEEVY---VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC---AELYEK-- 230 (297)
T ss_pred EECCcCCCccccce---eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHH--
Confidence 99999998642111 11111223557999999988889999999999999999998 9999964322 111111
Q ss_pred hcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHhhh
Q 002647 721 PLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNEF 781 (897)
Q Consensus 721 ~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~~e~ 781 (897)
... . .....+......+.+|+.+||+.+|.+||++.+|++.|+.+.+..
T Consensus 231 -~~~---~--------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 231 -LPQ---G--------YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred -Hhc---C--------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 000 0 000111223356789999999999999999999999998876554
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-37 Score=325.66 Aligned_cols=250 Identities=28% Similarity=0.442 Sum_probs=200.3
Q ss_pred CceeeeEEeecCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccC
Q 002647 500 GFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHN 579 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~g 579 (897)
+|++.+.||+|+||.||+|.++++..+|+|.+..... ...+|.+|++++++++|+||+++++++.+.+..++||||+++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN 83 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence 4677889999999999999988778899999864332 346789999999999999999999999998999999999999
Q ss_pred CccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcc
Q 002647 580 GSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH 659 (897)
Q Consensus 580 GSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~ 659 (897)
++|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++...+... .
T Consensus 84 ~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~-~ 156 (256)
T cd05059 84 GCLLNYLRER---KGKLGTEWLLDMCSDVCEAMEYLESNG---FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY-T 156 (256)
T ss_pred CCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHhhEEECCCCcEEECCcccceecccccc-c
Confidence 9999998632 236899999999999999999999988 99999999999999999999999999876532211 1
Q ss_pred cccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccccccchhc
Q 002647 660 ISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIE 738 (897)
Q Consensus 660 ~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~ 738 (897)
......++..|+|||++....++.++||||||+++|||++ |+.||+..... ....... .. ..
T Consensus 157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~~~~~------~~----~~---- 219 (256)
T cd05059 157 SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS---EVVESVS------AG----YR---- 219 (256)
T ss_pred ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH---HHHHHHH------cC----Cc----
Confidence 1111223457999999998899999999999999999999 89998643221 1111100 00 00
Q ss_pred cCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002647 739 SNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL 774 (897)
Q Consensus 739 ~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L 774 (897)
...+......+.+|+.+||+.+|++||++.||++.|
T Consensus 220 ~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 220 LYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 011122345788999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-37 Score=332.49 Aligned_cols=264 Identities=22% Similarity=0.330 Sum_probs=197.7
Q ss_pred hCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccc-cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEe
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQ-HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYE 575 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~-~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~E 575 (897)
.++|++.+.||+|+||+||+|... +++.||||+++.... .....+.+|++++++++|+||+++++++.++...++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 478999999999999999999965 689999999875432 223467899999999999999999999999999999999
Q ss_pred eccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccC
Q 002647 576 LIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655 (897)
Q Consensus 576 y~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~ 655 (897)
|+. ++|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 84 ~~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 156 (303)
T cd07869 84 YVH-TDLCQYMDK---HPGGLHPENVKLFLFQLLRGLSYIHQRY---ILHRDLKPQNLLISDTGELKLADFGLARAKSVP 156 (303)
T ss_pred CCC-cCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECCCCcceeccCC
Confidence 995 578777753 2356899999999999999999999988 999999999999999999999999998753221
Q ss_pred CCcccccccccccccCChhhhhc-CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccc--c------
Q 002647 656 GNKHISTHVMGTFGYLAPEYAMT-GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTT--K------ 726 (897)
Q Consensus 656 ~~~~~~t~~~GT~~Y~APE~l~~-~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~--~------ 726 (897)
........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ............. .
T Consensus 157 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 232 (303)
T cd07869 157 --SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDI--QDQLERIFLVLGTPNEDTWPGV 232 (303)
T ss_pred --CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccH--HHHHHHHHHHhCCCChhhccch
Confidence 122234568999999998875 45788999999999999999999999753221 1111100000000 0
Q ss_pred --------ccccccccchhccCCC-HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 727 --------EGLKTIIDPVIESNIS-YDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 727 --------e~l~~iiDp~l~~~~~-~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
+.........+..... ......+.+++..||+.||++|||+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 233 HSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred hhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 0000000000000000 011235678999999999999999999975
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-37 Score=339.74 Aligned_cols=242 Identities=26% Similarity=0.351 Sum_probs=194.4
Q ss_pred eEEeecCceEEEEEEe-cCCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccCC
Q 002647 505 RIIGEGGFGVVYRGIL-DDGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNG 580 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~gG 580 (897)
+.||+|+||+||++.. .+|+.||+|+++... ......+.+|+++++.++|+||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999995 468999999997532 223456788999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhc-cCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcc
Q 002647 581 SLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHE-DSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH 659 (897)
Q Consensus 581 SL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~-~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~ 659 (897)
+|.+++.. ...+++.++..++.||+.||+|||+ .+ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 ~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~lH~~~~---ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~--~ 151 (325)
T cd05594 81 ELFFHLSR----ERVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG--A 151 (325)
T ss_pred cHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCCCCeEEECCCCCEEEecCCCCeecCCCC--c
Confidence 99988843 3468999999999999999999997 56 9999999999999999999999999987532221 1
Q ss_pred cccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhcc
Q 002647 660 ISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIES 739 (897)
Q Consensus 660 ~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~ 739 (897)
......||..|+|||++.+..++.++|||||||++|||+||+.||...... .+... ..... .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~---~~~~~---i~~~~--------~---- 213 (325)
T cd05594 152 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---KLFEL---ILMEE--------I---- 213 (325)
T ss_pred ccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH---HHHHH---HhcCC--------C----
Confidence 223457999999999999999999999999999999999999999643221 11110 00000 0
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 002647 740 NISYDTLVKVAAIASMCVQPEVSHRP-----FMGEVVQA 773 (897)
Q Consensus 740 ~~~~e~~~~L~~Li~~CL~~dP~~RP-----Tm~EVl~~ 773 (897)
.++......+.+++.+||+.||++|+ ++.|+++.
T Consensus 214 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 214 RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred CCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 01112234578899999999999996 89998754
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-37 Score=341.90 Aligned_cols=246 Identities=23% Similarity=0.316 Sum_probs=198.8
Q ss_pred hCCceeeeEEeecCceEEEEEEecC--CCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEE
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILDD--GREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCL 572 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~~--g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~L 572 (897)
.++|.+.+.||+|+||.||+|...+ +..||+|++.... ....+.+.+|+++++.++|+||+++++++.+++..++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 3568899999999999999998643 3689999986432 2334578899999999999999999999999999999
Q ss_pred EEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhc
Q 002647 573 VYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTA 652 (897)
Q Consensus 573 V~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~ 652 (897)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 109 v~Ey~~~g~L~~~i~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~ikL~DFG~a~~~ 181 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRR----NKRFPNDVGCFYAAQIVLIFEYLQSLN---IVYRDLKPENLLLDKDGFIKMTDFGFAKVV 181 (340)
T ss_pred EEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEecCCCCeec
Confidence 9999999999999953 346899999999999999999999988 999999999999999999999999999754
Q ss_pred ccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccccccccc
Q 002647 653 LDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTI 732 (897)
Q Consensus 653 ~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~i 732 (897)
... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ... ..+....
T Consensus 182 ~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~---~~~---~~i~~~~------ 244 (340)
T PTZ00426 182 DTR-----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL---LIY---QKILEGI------ 244 (340)
T ss_pred CCC-----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH---HHH---HHHhcCC------
Confidence 221 23457999999999999888999999999999999999999999743221 110 0011000
Q ss_pred ccchhccCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 002647 733 IDPVIESNISYDTLVKVAAIASMCVQPEVSHRP-----FMGEVVQA 773 (897)
Q Consensus 733 iDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RP-----Tm~EVl~~ 773 (897)
+ .++......+.+++.+|++.||++|+ ++.|+++.
T Consensus 245 ~------~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 245 I------YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred C------CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 0 01112224567899999999999995 78887654
|
|
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-37 Score=339.38 Aligned_cols=252 Identities=23% Similarity=0.241 Sum_probs=199.4
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~ 574 (897)
++|.+.+.||+|+||+||++... +|+.||||+++... ....+.+.+|+++++.++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 47899999999999999999964 68999999997532 233456889999999999999999999999999999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
||+++|+|.+++... ...+++..+..++.|+++||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~lH~~~---i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 154 (330)
T cd05601 81 EYQPGGDLLSLLNRY---EDQFDEDMAQFYLAELVLAIHSVHQMG---YVHRDIKPENVLIDRTGHIKLADFGSAARLTA 154 (330)
T ss_pred CCCCCCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEcccCchHheEECCCCCEEeccCCCCeECCC
Confidence 999999999999632 346999999999999999999999988 99999999999999999999999999976533
Q ss_pred CCCcccccccccccccCChhhhh------cCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccccc
Q 002647 655 EGNKHISTHVMGTFGYLAPEYAM------TGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEG 728 (897)
Q Consensus 655 ~~~~~~~t~~~GT~~Y~APE~l~------~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~ 728 (897)
... .......||+.|+|||++. ...++.++|||||||++|||++|+.||....... ....+......
T Consensus 155 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~------~~~~i~~~~~~ 227 (330)
T cd05601 155 NKM-VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK------TYNNIMNFQRF 227 (330)
T ss_pred CCc-eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHH------HHHHHHcCCCc
Confidence 222 2233457899999999987 4567889999999999999999999996432211 11111110000
Q ss_pred ccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 729 LKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 729 l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
+ ... ........+.+++..|++ +|++||++.++++
T Consensus 228 ~-~~~-------~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 228 L-KFP-------EDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred c-CCC-------CCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 0 000 011123457789999998 9999999999864
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-37 Score=328.15 Aligned_cols=258 Identities=26% Similarity=0.430 Sum_probs=202.4
Q ss_pred hCCceeeeEEeecCceEEEEEEec-CCC----EEEEEEeeccc-ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceE
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILD-DGR----EVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRC 571 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~-~g~----~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~ 571 (897)
.++|+..++||+|+||+||+|++. +|. .||+|+++... ....+++.+|+.+++.++|+||+++++++.. ...+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcE
Confidence 356888999999999999999853 454 48999987532 3334678899999999999999999999976 4568
Q ss_pred EEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchh
Q 002647 572 LVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLART 651 (897)
Q Consensus 572 LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~ 651 (897)
+++||+++|+|.++++.. ...+++.+++.++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++.
T Consensus 85 l~~~~~~~g~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~~---iiH~dlkp~Nil~~~~~~~kL~dfG~~~~ 158 (279)
T cd05109 85 LVTQLMPYGCLLDYVREN---KDRIGSQDLLNWCVQIAKGMSYLEEVR---LVHRDLAARNVLVKSPNHVKITDFGLARL 158 (279)
T ss_pred EEEEcCCCCCHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEcCCCcEEECCCCceee
Confidence 999999999999999632 346899999999999999999999887 99999999999999999999999999986
Q ss_pred cccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhccccccccc
Q 002647 652 ALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLK 730 (897)
Q Consensus 652 ~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~ 730 (897)
..............++..|+|||.+.+..++.++|||||||++|||++ |..||+.... ..+..+.... ...
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~~~~~~~~~----~~~- 230 (279)
T cd05109 159 LDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA---REIPDLLEKG----ERL- 230 (279)
T ss_pred cccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHHHCC----CcC-
Confidence 533222111222345678999999998899999999999999999998 8999864321 2222222110 000
Q ss_pred ccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHh
Q 002647 731 TIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCN 779 (897)
Q Consensus 731 ~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~~ 779 (897)
.........+.+++.+||+.||++||++.|+++.|+.+..
T Consensus 231 ---------~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05109 231 ---------PQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR 270 (279)
T ss_pred ---------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 0111233467889999999999999999999998876644
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-37 Score=324.85 Aligned_cols=256 Identities=29% Similarity=0.466 Sum_probs=202.6
Q ss_pred CCceeeeEEeecCceEEEEEEec-CC---CEEEEEEeecc-cccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DG---REVAVKVLKRA-NQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLV 573 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g---~~VAVK~lk~~-~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV 573 (897)
.+|++.+.||+|+||.||+|.+. ++ ..||||.++.. .....++|..|++++++++|+||+++++++.++...++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 35788999999999999999965 33 36999998754 233456899999999999999999999999999999999
Q ss_pred EeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcc
Q 002647 574 YELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTAL 653 (897)
Q Consensus 574 ~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~ 653 (897)
|||+++|+|.+++... ...+++.+++.++.|++.||+|||+.+ ++|+||||+|||++.++.+||+|||+++...
T Consensus 84 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~l~~al~~lH~~g---~~H~dl~p~nili~~~~~~kl~dfg~~~~~~ 157 (269)
T cd05065 84 TEFMENGALDSFLRQN---DGQFTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLE 157 (269)
T ss_pred EecCCCCcHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccChheEEEcCCCcEEECCCccccccc
Confidence 9999999999998632 346899999999999999999999987 9999999999999999999999999987543
Q ss_pred cCCCccccc-ccc--cccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccc
Q 002647 654 DEGNKHIST-HVM--GTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGL 729 (897)
Q Consensus 654 ~~~~~~~~t-~~~--GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l 729 (897)
......... ... .+..|+|||++....++.++||||||+++|||++ |..||..... .+...+..... .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~---~~~~~~i~~~~----~- 229 (269)
T cd05065 158 DDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN---QDVINAIEQDY----R- 229 (269)
T ss_pred cCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH---HHHHHHHHcCC----c-
Confidence 322211111 111 2457999999998999999999999999999886 9999864332 22222221100 0
Q ss_pred cccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 002647 730 KTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLV 777 (897)
Q Consensus 730 ~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l 777 (897)
.....+....+.+++.+||+.+|.+||++.+|+..|+.+
T Consensus 230 ---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 230 ---------LPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred ---------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 001123345678899999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-37 Score=328.60 Aligned_cols=264 Identities=26% Similarity=0.437 Sum_probs=205.0
Q ss_pred CCceeeeEEeecCceEEEEEEecC-----------------CCEEEEEEeeccc-ccchHHHHHHHHHHhhccCCceeeE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILDD-----------------GREVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKL 560 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~~-----------------g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~HpNIV~L 560 (897)
.+|++.+.||+|+||.||+|...+ +..||+|.+.... ....+++.+|+++|++++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~ 84 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL 84 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 568889999999999999998642 2458999987543 2345678999999999999999999
Q ss_pred eeeeecCCceEEEEeeccCCccccccccCCC-------CCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcE
Q 002647 561 FGVCIEDNNRCLVYELIHNGSLESHLHGDDK-------VNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNI 633 (897)
Q Consensus 561 lg~~~~~~~~~LV~Ey~~gGSL~~~L~~~~~-------~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNI 633 (897)
++++..++..++||||+.+++|.++|..... ....+++..++.++.|++.||+|||+.+ |+||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~---i~H~dlkp~Ni 161 (296)
T cd05051 85 LGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN---FVHRDLATRNC 161 (296)
T ss_pred EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhce
Confidence 9999999999999999999999999864321 1226899999999999999999999887 99999999999
Q ss_pred EEccCCceEEeccCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh--CCCCCCCCCCCC
Q 002647 634 LLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT--GRKPVDLSQPPG 711 (897)
Q Consensus 634 LLd~~~~vKLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT--Gk~Pfd~~~~~~ 711 (897)
|++.++.+||+|||+++...............++..|+|||++....++.++|||||||++|||++ |..||.....
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~-- 239 (296)
T cd05051 162 LVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD-- 239 (296)
T ss_pred eecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh--
Confidence 999999999999999986543332233334556789999999998899999999999999999998 6777754321
Q ss_pred chhhHHhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 002647 712 QENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775 (897)
Q Consensus 712 ~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~ 775 (897)
.....+......... .....+ .+.....++.+++.+||+.||.+||++.||++.|+
T Consensus 240 -~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 240 -QQVIENAGHFFRDDG-RQIYLP------RPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred -HHHHHHHHhcccccc-ccccCC------CccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 222222221111111 000000 11122356889999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-37 Score=319.54 Aligned_cols=251 Identities=32% Similarity=0.519 Sum_probs=203.7
Q ss_pred eEEeecCceEEEEEEecC----CCEEEEEEeeccccc-chHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccC
Q 002647 505 RIIGEGGFGVVYRGILDD----GREVAVKVLKRANQH-GGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHN 579 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~~----g~~VAVK~lk~~~~~-~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~g 579 (897)
++||+|+||.||+|...+ +..||+|.++..... ..+++.+|++++++++|+|++++++++......++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 469999999999999754 788999999865433 357899999999999999999999999999999999999999
Q ss_pred CccccccccCCCC-----CCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 580 GSLESHLHGDDKV-----NGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 580 GSL~~~L~~~~~~-----~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
++|.+++...... ...+++.+++.++.|+++||+|||+.+ |+||||||+||++++++.+||+|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK---FVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC---cccCccCcceEEECCCCcEEEccccccccccc
Confidence 9999999654211 367999999999999999999999987 99999999999999999999999999987644
Q ss_pred CCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccccc
Q 002647 655 EGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTII 733 (897)
Q Consensus 655 ~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~ii 733 (897)
...........++..|+|||.+....++.++||||||+++|||++ |+.||..... ..+...... ..
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~~~~~~~~~----~~------ 224 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN---EEVLEYLRK----GY------ 224 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH---HHHHHHHHc----CC------
Confidence 332223344567889999999988889999999999999999999 6999975421 111111110 00
Q ss_pred cchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 002647 734 DPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775 (897)
Q Consensus 734 Dp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~ 775 (897)
....+......+.+++.+||+.+|++||++.|+++.|+
T Consensus 225 ----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 225 ----RLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ----CCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 00112223457889999999999999999999998773
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-37 Score=332.55 Aligned_cols=264 Identities=25% Similarity=0.437 Sum_probs=201.3
Q ss_pred CCceeeeEEeecCceEEEEEEecC---------------CCEEEEEEeeccc-ccchHHHHHHHHHHhhccCCceeeEee
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILDD---------------GREVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKLFG 562 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~~---------------g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~HpNIV~Llg 562 (897)
++|++.+.||+|+||.||++...+ ...||||.++... ....+.|.+|+++|++++|+|++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 578899999999999999987542 1248999987532 233457999999999999999999999
Q ss_pred eeecCCceEEEEeeccCCccccccccCCC--------CCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEE
Q 002647 563 VCIEDNNRCLVYELIHNGSLESHLHGDDK--------VNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNIL 634 (897)
Q Consensus 563 ~~~~~~~~~LV~Ey~~gGSL~~~L~~~~~--------~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNIL 634 (897)
++...+..++||||+++++|.+++..... ....+++..++.++.|++.||+|||+.+ ++||||||+|||
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil 161 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN---FVHRDLATRNCL 161 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC---eeccccChhhEE
Confidence 99999999999999999999999854211 1124789999999999999999999988 999999999999
Q ss_pred EccCCceEEeccCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh--CCCCCCCCCCCCc
Q 002647 635 LEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT--GRKPVDLSQPPGQ 712 (897)
Q Consensus 635 Ld~~~~vKLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT--Gk~Pfd~~~~~~~ 712 (897)
+++++.+||+|||+++...............++..|+|||++..+.++.++|||||||++|||++ |..||.....
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~--- 238 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSD--- 238 (295)
T ss_pred EcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccCh---
Confidence 99999999999999976533222222233445778999999998899999999999999999998 5667754322
Q ss_pred hhhHHhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 002647 713 ENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775 (897)
Q Consensus 713 ~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~ 775 (897)
...+................ ..+......+.+|+.+||+.||++||++.+|++.|+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 239 EQVIENTGEFFRNQGRQIYL-------SQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHHHHHHHHhhhhccccccC-------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 11111111111100000000 011112357889999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-37 Score=330.95 Aligned_cols=261 Identities=27% Similarity=0.441 Sum_probs=204.0
Q ss_pred hhCCceeeeEEeecCceEEEEEEec------CCCEEEEEEeecccc-cchHHHHHHHHHHhhccCCceeeEeeeeecCCc
Q 002647 497 ATNGFHTSRIIGEGGFGVVYRGILD------DGREVAVKVLKRANQ-HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNN 569 (897)
Q Consensus 497 at~~y~~~~~LG~G~fGtVyka~l~------~g~~VAVK~lk~~~~-~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~ 569 (897)
..++|++.++||+|+||.||+|..+ .+..||+|.++.... .....+.+|+.++++++|+||+++++++.+.+.
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4578999999999999999999754 245799998864332 223468899999999999999999999999899
Q ss_pred eEEEEeeccCCccccccccCCC------CCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEE
Q 002647 570 RCLVYELIHNGSLESHLHGDDK------VNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKV 643 (897)
Q Consensus 570 ~~LV~Ey~~gGSL~~~L~~~~~------~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKL 643 (897)
.++||||+++|+|.+++..... ....+++..+.+++.|++.||+|||+.+ |+||||||+|||+++++.+||
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCCChheEEEcCCCcEEE
Confidence 9999999999999999964221 1234678889999999999999999887 999999999999999999999
Q ss_pred eccCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhc
Q 002647 644 SDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPL 722 (897)
Q Consensus 644 sDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l 722 (897)
+|||+++...............++..|+|||.+..+.++.++|||||||++|||++ |..||..... ...... .
T Consensus 161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~---~~~~~~---~ 234 (288)
T cd05061 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN---EQVLKF---V 234 (288)
T ss_pred CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHH---H
Confidence 99999986533222222223345678999999998899999999999999999999 7888864321 111111 0
Q ss_pred ccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 002647 723 LTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLV 777 (897)
Q Consensus 723 ~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l 777 (897)
.. .+ .. ..+......+.+|+.+|++.||++||++.|+++.|+..
T Consensus 235 ~~-~~-~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 235 MD-GG-YL---------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred Hc-CC-CC---------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 00 00 00 01122335788999999999999999999999888764
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-37 Score=330.29 Aligned_cols=257 Identities=27% Similarity=0.458 Sum_probs=203.7
Q ss_pred CCceeeeEEeecCceEEEEEEec------CCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD------DGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCL 572 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~------~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~L 572 (897)
.+|...++||+|+||.||++... ++..+|+|.++........+|.+|++++++++|+||+++++++......++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 46778899999999999999742 356799999887666666789999999999999999999999999899999
Q ss_pred EEeeccCCccccccccCCC-----------CCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCce
Q 002647 573 VYELIHNGSLESHLHGDDK-----------VNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTP 641 (897)
Q Consensus 573 V~Ey~~gGSL~~~L~~~~~-----------~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~v 641 (897)
||||+++|+|.++++.... ....+++..++.++.|++.||+|||+.+ |+||||||+|||+++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH---FVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC---eecccccHhhEEEcCCCCE
Confidence 9999999999999864321 1135899999999999999999999888 9999999999999999999
Q ss_pred EEeccCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhh
Q 002647 642 KVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWAR 720 (897)
Q Consensus 642 KLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~ 720 (897)
||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |+.||...... ......
T Consensus 162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~~~~~~- 237 (280)
T cd05092 162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNT---EAIECI- 237 (280)
T ss_pred EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHH---HHHHHH-
Confidence 9999999875433222122223345788999999999999999999999999999998 89998543221 111110
Q ss_pred hcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 002647 721 PLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775 (897)
Q Consensus 721 ~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~ 775 (897)
.. .. . ...+......+.+|+.+||+.||.+||++.||++.|+
T Consensus 238 --~~-~~--~--------~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 238 --TQ-GR--E--------LERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred --Hc-Cc--c--------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 00 00 0 0011122356789999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-37 Score=336.76 Aligned_cols=248 Identities=23% Similarity=0.351 Sum_probs=195.2
Q ss_pred eEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhc-cCCceeeEeeeeecCCceEEEEeeccC
Q 002647 505 RIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRL-HHRNLVKLFGVCIEDNNRCLVYELIHN 579 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~~~~~LV~Ey~~g 579 (897)
++||+|+||.||+|... +++.||||+++... ....+.+.+|..++.++ +|+||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 47999999999999965 68899999998532 23345688899999998 799999999999999999999999999
Q ss_pred CccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcc
Q 002647 580 GSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH 659 (897)
Q Consensus 580 GSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~ 659 (897)
|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 g~L~~~~~~----~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~--~ 151 (329)
T cd05588 81 GDLMFHMQR----QRKLPEEHARFYSAEISLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG--D 151 (329)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEECcCccccccccCC--C
Confidence 999988842 356999999999999999999999988 9999999999999999999999999987532211 1
Q ss_pred cccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCC--chhhHHhhhhcccccccccccccchh
Q 002647 660 ISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPG--QENLVAWARPLLTTKEGLKTIIDPVI 737 (897)
Q Consensus 660 ~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~--~~~lv~w~~~l~~~~e~l~~iiDp~l 737 (897)
......||..|+|||++.+..++.++|||||||++|||+||+.||+...... ......+....... ...
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 222 (329)
T cd05588 152 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILE---------KQI 222 (329)
T ss_pred ccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHc---------CCC
Confidence 2234679999999999999999999999999999999999999997433221 11111221111110 000
Q ss_pred ccCCCHHHHHHHHHHHHHccCCCCCCCCC------HHHHHH
Q 002647 738 ESNISYDTLVKVAAIASMCVQPEVSHRPF------MGEVVQ 772 (897)
Q Consensus 738 ~~~~~~e~~~~L~~Li~~CL~~dP~~RPT------m~EVl~ 772 (897)
.++......+.+++.+||+.||.+|++ +.|+++
T Consensus 223 --~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 223 --RIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred --CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 112223346788999999999999997 566653
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-37 Score=322.37 Aligned_cols=254 Identities=27% Similarity=0.439 Sum_probs=204.0
Q ss_pred hCCceeeeEEeecCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeec
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELI 577 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~ 577 (897)
.++|++.++||+|+||.||+|..++++.||+|.+..... ...+|.+|++++++++|+||+++++++. .+..++||||+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYM 82 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcC
Confidence 467889999999999999999988899999999875433 3468999999999999999999999874 45789999999
Q ss_pred cCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCC
Q 002647 578 HNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN 657 (897)
Q Consensus 578 ~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~ 657 (897)
.+|+|.+++... ....+++.+++.++.|++.||+|||+.+ ++||||||+||++++++.++|+|||++........
T Consensus 83 ~~~~L~~~~~~~--~~~~~~~~~~~~i~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05067 83 ENGSLVDFLKTP--EGIKLTINKLIDMAAQIAEGMAFIERKN---YIHRDLRAANILVSETLCCKIADFGLARLIEDNEY 157 (260)
T ss_pred CCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHHhEEEcCCCCEEEccCcceeecCCCCc
Confidence 999999998642 2346899999999999999999999887 99999999999999999999999999876532211
Q ss_pred cccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccccccch
Q 002647 658 KHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPV 736 (897)
Q Consensus 658 ~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~ 736 (897)
.......++..|+|||++....++.++||||||+++|||++ |+.||..... ..+...... ...
T Consensus 158 -~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---~~~~~~~~~------~~~------ 221 (260)
T cd05067 158 -TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN---PEVIQNLER------GYR------ 221 (260)
T ss_pred -ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh---HHHHHHHHc------CCC------
Confidence 11223345678999999988889999999999999999999 9999964332 111111100 000
Q ss_pred hccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002647 737 IESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKL 776 (897)
Q Consensus 737 l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~ 776 (897)
..........+.+++.+|++.+|++||++.+++..|+.
T Consensus 222 --~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 222 --MPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred --CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 01111223568899999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-37 Score=336.39 Aligned_cols=240 Identities=25% Similarity=0.393 Sum_probs=190.7
Q ss_pred ceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHH---hhccCCceeeEeeeeecCCceEEE
Q 002647 501 FHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEML---SRLHHRNLVKLFGVCIEDNNRCLV 573 (897)
Q Consensus 501 y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL---~~L~HpNIV~Llg~~~~~~~~~LV 573 (897)
|++.++||+|+||.||+|... +|+.||||+++... ....+.+.+|++++ ++++|+||+++++++...+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 667899999999999999965 68999999997532 22334566676654 567899999999999999999999
Q ss_pred EeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcc
Q 002647 574 YELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTAL 653 (897)
Q Consensus 574 ~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~ 653 (897)
|||+++|+|..+++. ..+++.++..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 81 ~E~~~~~~L~~~~~~-----~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~ 152 (324)
T cd05589 81 MEYAAGGDLMMHIHT-----DVFSEPRAVFYAACVVLGLQYLHENK---IVYRDLKLDNLLLDTEGFVKIADFGLCKEGM 152 (324)
T ss_pred EcCCCCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCcEEeCcccCCccCC
Confidence 999999999988842 46999999999999999999999988 9999999999999999999999999987532
Q ss_pred cCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccc
Q 002647 654 DEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTII 733 (897)
Q Consensus 654 ~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~ii 733 (897)
... .......|++.|+|||++.+..++.++|||||||++|||++|+.||...... ... ..+....
T Consensus 153 ~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~---~~~---~~i~~~~------- 217 (324)
T cd05589 153 GFG--DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE---EVF---DSIVNDE------- 217 (324)
T ss_pred CCC--CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH---HHH---HHHHhCC-------
Confidence 211 2233467999999999999989999999999999999999999999743321 111 1111100
Q ss_pred cchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHH
Q 002647 734 DPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMG 768 (897)
Q Consensus 734 Dp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~ 768 (897)
. ..+......+.+++.+||+.||.+||++.
T Consensus 218 -~----~~p~~~~~~~~~li~~~L~~dP~~R~~~~ 247 (324)
T cd05589 218 -V----RYPRFLSREAISIMRRLLRRNPERRLGSG 247 (324)
T ss_pred -C----CCCCCCCHHHHHHHHHHhhcCHhHcCCCC
Confidence 0 01112234577899999999999999543
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=332.74 Aligned_cols=262 Identities=26% Similarity=0.431 Sum_probs=204.8
Q ss_pred CCceeeeEEeecCceEEEEEEec--------CCCEEEEEEeeccc-ccchHHHHHHHHHHhhc-cCCceeeEeeeeecCC
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD--------DGREVAVKVLKRAN-QHGGREFLAELEMLSRL-HHRNLVKLFGVCIEDN 568 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~--------~g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~~ 568 (897)
++|.+.++||+|+||.||+|... ....+|+|.++... .....++.+|+++++++ +|+||++++++|....
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 56788999999999999999742 24569999987532 23345788999999999 6999999999999988
Q ss_pred ceEEEEeeccCCccccccccCCC------------CCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEc
Q 002647 569 NRCLVYELIHNGSLESHLHGDDK------------VNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLE 636 (897)
Q Consensus 569 ~~~LV~Ey~~gGSL~~~L~~~~~------------~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd 636 (897)
..++||||+++|+|.+++..... ....+++.++++++.|++.||+|||+.+ |+||||||+|||++
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill~ 168 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR---CIHRDLAARNVLVT 168 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeeccccceeEEEc
Confidence 99999999999999999964321 1246899999999999999999999887 99999999999999
Q ss_pred cCCceEEeccCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhh
Q 002647 637 HDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENL 715 (897)
Q Consensus 637 ~~~~vKLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~l 715 (897)
+++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |+.||..... ..+
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~---~~~ 245 (314)
T cd05099 169 EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV---EEL 245 (314)
T ss_pred CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH---HHH
Confidence 999999999999986533221111122234567999999998899999999999999999999 8888864322 111
Q ss_pred HHhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHhh
Q 002647 716 VAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNE 780 (897)
Q Consensus 716 v~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~~e 780 (897)
..... .... ...+......+.+++.+||+.+|++||++.|+++.|+.+...
T Consensus 246 ~~~~~----~~~~----------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 296 (314)
T cd05099 246 FKLLR----EGHR----------MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAA 296 (314)
T ss_pred HHHHH----cCCC----------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHH
Confidence 11111 0000 011222345677899999999999999999999999887653
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-38 Score=346.16 Aligned_cols=249 Identities=25% Similarity=0.405 Sum_probs=206.6
Q ss_pred CCceeeeEEeecCceEEEEEEe-cCCCEEEEEEeecc-cccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 499 NGFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRA-NQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~-~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
..|...+.||+|.||.||||.. ..++.||+|++... .+...+++.+|+.+|.+++++||.+++|.+..+..++++|||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 3466668999999999999995 46889999999753 344567899999999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
|.+|++.+.|.. ...+++..+..|+.+++.||.|||.++ .+|||||+.|||+..+|.+||+|||++.......
T Consensus 93 ~~gGsv~~lL~~----~~~~~E~~i~~ilre~l~~l~ylH~~~---kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~ 165 (467)
T KOG0201|consen 93 CGGGSVLDLLKS----GNILDEFEIAVILREVLKGLDYLHSEK---KIHRDIKAANILLSESGDVKLADFGVAGQLTNTV 165 (467)
T ss_pred hcCcchhhhhcc----CCCCccceeeeehHHHHHHhhhhhhcc---eecccccccceeEeccCcEEEEecceeeeeechh
Confidence 999999999953 344588888889999999999999998 9999999999999999999999999998664433
Q ss_pred CcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccch
Q 002647 657 NKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPV 736 (897)
Q Consensus 657 ~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~ 736 (897)
.. ..+++||+.|||||+++...|+.|+||||||++.+||++|.+|+....+... ++- +..-..|.
T Consensus 166 ~r--r~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrv---------lfl----Ipk~~PP~ 230 (467)
T KOG0201|consen 166 KR--RKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRV---------LFL----IPKSAPPR 230 (467)
T ss_pred hc--cccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceE---------EEe----ccCCCCCc
Confidence 22 2578999999999999988999999999999999999999999965433211 111 11111222
Q ss_pred hccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 737 IESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 737 l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
+.+ +....+.+++..||+.||+.||++.++++.
T Consensus 231 L~~----~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 231 LDG----DFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred ccc----ccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 322 444568899999999999999999999864
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-38 Score=350.30 Aligned_cols=247 Identities=28% Similarity=0.419 Sum_probs=209.3
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc--ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEe
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN--QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYE 575 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~E 575 (897)
++|.+.+.||+|.||.||||+.+ +.+.||+|.+.+.. +.+.+.+.+|++++++|+|||||.++++|+...++++|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 56888899999999999999965 57889999997543 3345678999999999999999999999999999999999
Q ss_pred eccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccC
Q 002647 576 LIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655 (897)
Q Consensus 576 y~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~ 655 (897)
|+.| +|..+|.. .+.|.++.+..|+.++..||.|||+.+ |+|||+||.||||+.++.+|+||||+|+...
T Consensus 82 ~a~g-~L~~il~~----d~~lpEe~v~~~a~~LVsaL~yLhs~r---ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~-- 151 (808)
T KOG0597|consen 82 YAVG-DLFTILEQ----DGKLPEEQVRAIAYDLVSALYYLHSNR---ILHRDMKPQNILLEKGGTLKLCDFGLARAMS-- 151 (808)
T ss_pred hhhh-hHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHhcC---cccccCCcceeeecCCCceeechhhhhhhcc--
Confidence 9987 99999953 467999999999999999999999887 9999999999999999999999999999753
Q ss_pred CCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccc
Q 002647 656 GNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDP 735 (897)
Q Consensus 656 ~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp 735 (897)
.+..+.+.+.||+.|||||+..++.|+..+|+||+|||||||++|++||... .+...++.+..+ +
T Consensus 152 ~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~------si~~Lv~~I~~d---------~ 216 (808)
T KOG0597|consen 152 TNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR------SITQLVKSILKD---------P 216 (808)
T ss_pred cCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH------HHHHHHHHHhcC---------C
Confidence 3556677889999999999999999999999999999999999999999532 222222222211 0
Q ss_pred hhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 736 VIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 736 ~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
. ..+......+..++...+..||.+|-+..+++..
T Consensus 217 -v--~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 217 -V--KPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred -C--CCcccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 0 1233455678889999999999999999998754
|
|
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=328.95 Aligned_cols=264 Identities=23% Similarity=0.415 Sum_probs=202.2
Q ss_pred CCceeeeEEeecCceEEEEEEec-----------------CCCEEEEEEeeccc-ccchHHHHHHHHHHhhccCCceeeE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-----------------DGREVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKL 560 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-----------------~g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~HpNIV~L 560 (897)
++|++.++||+|+||+||++... ++..||+|+++... ....++|.+|+++|++++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 56889999999999999998532 23468999987543 3344679999999999999999999
Q ss_pred eeeeecCCceEEEEeeccCCccccccccCCCC-------CCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcE
Q 002647 561 FGVCIEDNNRCLVYELIHNGSLESHLHGDDKV-------NGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNI 633 (897)
Q Consensus 561 lg~~~~~~~~~LV~Ey~~gGSL~~~L~~~~~~-------~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNI 633 (897)
++++...+..++||||+++|+|.+++...... ...+++.+++.++.|++.||+|||+.+ |+||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN---FVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---eecccCChheE
Confidence 99999999999999999999999998653211 134888999999999999999999988 99999999999
Q ss_pred EEccCCceEEeccCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh--CCCCCCCCCCCC
Q 002647 634 LLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT--GRKPVDLSQPPG 711 (897)
Q Consensus 634 LLd~~~~vKLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT--Gk~Pfd~~~~~~ 711 (897)
|+++++.+||+|||+++...............++..|++||+...+.++.++|||||||++|||++ |..||.......
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~ 241 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ 241 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH
Confidence 999999999999999986533222222223345678999999888899999999999999999998 677875432211
Q ss_pred chhhHHhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 002647 712 QENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775 (897)
Q Consensus 712 ~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~ 775 (897)
.+........... ....+ ..+..+...+.+|+.+||+.||++||++.||++.|+
T Consensus 242 ---~~~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 242 ---VIENTGEFFRDQG-RQVYL------PKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred ---HHHHHHHHHhhcc-ccccC------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 1111100110000 00000 011123357889999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-37 Score=342.15 Aligned_cols=202 Identities=27% Similarity=0.384 Sum_probs=174.7
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~ 574 (897)
++|++.++||+|+||+||+|... +++.||||+++... ......+.+|++++.+++|+||+++++.+.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 47889999999999999999865 68899999997532 223356788999999999999999999999999999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
||+++|+|.+++.. ...+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~lH~~g---ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~ 153 (363)
T cd05628 81 EFLPGGDMMTLLMK----KDTLTEEETQFYIAETVLAIDSIHQLG---FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKK 153 (363)
T ss_pred cCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCCEEEeeccCcccccc
Confidence 99999999999953 356999999999999999999999988 99999999999999999999999999875422
Q ss_pred CCC---------------------------------cccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCC
Q 002647 655 EGN---------------------------------KHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGR 701 (897)
Q Consensus 655 ~~~---------------------------------~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk 701 (897)
... ........||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~ 233 (363)
T cd05628 154 AHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (363)
T ss_pred cccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCC
Confidence 110 00112357999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 002647 702 KPVDLS 707 (897)
Q Consensus 702 ~Pfd~~ 707 (897)
.||...
T Consensus 234 ~Pf~~~ 239 (363)
T cd05628 234 PPFCSE 239 (363)
T ss_pred CCCCCC
Confidence 999753
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=327.28 Aligned_cols=252 Identities=25% Similarity=0.363 Sum_probs=199.8
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEe
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYE 575 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~E 575 (897)
+|++.++||+|+||+||++... +++.||||++.... ......+.+|++++++++|+||+++++.+..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4788999999999999999964 68999999987532 2223467889999999999999999999999899999999
Q ss_pred eccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccC
Q 002647 576 LIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655 (897)
Q Consensus 576 y~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~ 655 (897)
|+++|+|.+++... ....+++..+..++.|++.||+|||+.+ |+||||||+||++++++.++|+|||+++.....
T Consensus 81 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05605 81 LMNGGDLKFHIYNM--GNPGFDEERAVFYAAEITCGLEDLHRER---IVYRDLKPENILLDDYGHIRISDLGLAVEIPEG 155 (285)
T ss_pred ccCCCcHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHEEECCCCCEEEeeCCCceecCCC
Confidence 99999999888532 2346899999999999999999999987 999999999999999999999999998764221
Q ss_pred CCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccc
Q 002647 656 GNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDP 735 (897)
Q Consensus 656 ~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp 735 (897)
. ......|+..|+|||++.+..++.++|||||||++|||++|+.||.......... .....+.. .
T Consensus 156 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~--~~~~~~~~---~------- 220 (285)
T cd05605 156 E---TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKRE--EVERRVKE---D------- 220 (285)
T ss_pred C---ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHH--HHHHHhhh---c-------
Confidence 1 1223468999999999998889999999999999999999999997533211110 00000000 0
Q ss_pred hhccCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 002647 736 VIESNISYDTLVKVAAIASMCVQPEVSHRP-----FMGEVVQA 773 (897)
Q Consensus 736 ~l~~~~~~e~~~~L~~Li~~CL~~dP~~RP-----Tm~EVl~~ 773 (897)
...++......+.+|+..||+.||++|| ++.++++.
T Consensus 221 --~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 221 --QEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred --ccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 0111222345678899999999999999 77787554
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-37 Score=329.56 Aligned_cols=247 Identities=23% Similarity=0.340 Sum_probs=195.3
Q ss_pred EeecCceEEEEEEec-CCCEEEEEEeecccc---cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccCCcc
Q 002647 507 IGEGGFGVVYRGILD-DGREVAVKVLKRANQ---HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSL 582 (897)
Q Consensus 507 LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~---~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~gGSL 582 (897)
||+|+||+||++... +|+.||||.+..... ...+.+..|+++|++++|+||+++.+++..+...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999965 688999999875322 2235678899999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCccccc
Q 002647 583 ESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIST 662 (897)
Q Consensus 583 ~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~~~t 662 (897)
.+++.........+++..++.++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++...... ....
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~--~~~~ 155 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR---IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ--SKTK 155 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCccceecCCCC--cccc
Confidence 9887543334567999999999999999999999987 9999999999999999999999999987543322 1223
Q ss_pred ccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhccCCC
Q 002647 663 HVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESNIS 742 (897)
Q Consensus 663 ~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~ 742 (897)
...||+.|+|||++.+..++.++|||||||++|||++|+.||......... ...... +..... .++
T Consensus 156 ~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~--~~~~~~----------~~~~~~--~~~ 221 (280)
T cd05608 156 GYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN--KELKQR----------ILNDSV--TYP 221 (280)
T ss_pred ccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhH--HHHHHh----------hcccCC--CCc
Confidence 457899999999999999999999999999999999999999753321111 000000 010000 112
Q ss_pred HHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 002647 743 YDTLVKVAAIASMCVQPEVSHRP-----FMGEVVQ 772 (897)
Q Consensus 743 ~e~~~~L~~Li~~CL~~dP~~RP-----Tm~EVl~ 772 (897)
......+.+++.+||+.||++|| ++.|+++
T Consensus 222 ~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 222 DKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 23345678999999999999999 6666654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-37 Score=343.25 Aligned_cols=252 Identities=25% Similarity=0.332 Sum_probs=195.2
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~ 574 (897)
++|++.+.||+|+||+||+|+.. +++.||||++.... ......+.+|+++|++++|+||+++++.+.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 36899999999999999999954 68999999986432 223456889999999999999999999999999999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++..+..
T Consensus 81 E~~~~g~L~~~i~~----~~~~~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~ 153 (376)
T cd05598 81 DYIPGGDMMSLLIR----LGIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 153 (376)
T ss_pred eCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHEEECCCCCEEEEeCCCCccccc
Confidence 99999999999953 346889999999999999999999988 99999999999999999999999999753210
Q ss_pred CC-----------------------------------------CcccccccccccccCChhhhhcCCCCccccEEechhH
Q 002647 655 EG-----------------------------------------NKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVV 693 (897)
Q Consensus 655 ~~-----------------------------------------~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvI 693 (897)
.. .........||+.|+|||++.+..++.++|||||||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi 233 (376)
T cd05598 154 THDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 233 (376)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccce
Confidence 00 0001123579999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCch-hhHHhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCC---CHHH
Q 002647 694 LLELLTGRKPVDLSQPPGQE-NLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRP---FMGE 769 (897)
Q Consensus 694 L~ELlTGk~Pfd~~~~~~~~-~lv~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RP---Tm~E 769 (897)
||||++|+.||......+.. .+..|... . .+ + ........+.+++.+|+ .+|.+|+ ++.|
T Consensus 234 lyell~G~~Pf~~~~~~~~~~~i~~~~~~-------~-~~--~-----~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~e 297 (376)
T cd05598 234 LYEMLVGQPPFLADTPAETQLKVINWETT-------L-HI--P-----SQAKLSREASDLILRLC-CGAEDRLGKNGADE 297 (376)
T ss_pred eeehhhCCCCCCCCCHHHHHHHHhccCcc-------c-cC--C-----CCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHH
Confidence 99999999999754321111 11111100 0 00 0 00112234566777765 4999999 8888
Q ss_pred HHHH
Q 002647 770 VVQA 773 (897)
Q Consensus 770 Vl~~ 773 (897)
+++.
T Consensus 298 ll~h 301 (376)
T cd05598 298 IKAH 301 (376)
T ss_pred HhCC
Confidence 8654
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=319.09 Aligned_cols=249 Identities=27% Similarity=0.438 Sum_probs=203.1
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeecc--cccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRA--NQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~--~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
+|...+.||+|+||.||+|+.. +++.|++|.+... .....+++.+|++++++++|+||+++++++.+.+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4778899999999999999965 6899999998643 334456789999999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
+++++|.++++.. ....+++..++.++.|++.||.|||+.+ |+|+||||+||++++++.+||+|||+++......
T Consensus 81 ~~~~~L~~~l~~~--~~~~~~~~~~~~i~~~l~~al~~lH~~~---i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~ 155 (256)
T cd08529 81 AENGDLHKLLKMQ--RGRPLPEDQVWRFFIQILLGLAHLHSKK---ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT 155 (256)
T ss_pred CCCCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEeCCCCEEEcccccceeccCcc
Confidence 9999999999743 2356899999999999999999999887 9999999999999999999999999988653322
Q ss_pred CcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccch
Q 002647 657 NKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPV 736 (897)
Q Consensus 657 ~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~ 736 (897)
.......|+..|+|||++.+..++.++||||||+++|||++|+.||..... ....... .. . ..
T Consensus 156 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~---~~--~----~~--- 218 (256)
T cd08529 156 --NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ---GALILKI---IR--G----VF--- 218 (256)
T ss_pred --chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH---HHHHHHH---Hc--C----CC---
Confidence 122345688999999999999999999999999999999999999964331 1111111 00 0 00
Q ss_pred hccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 737 IESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 737 l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
..........+.+++.+||+.+|++||++.|+++
T Consensus 219 --~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 219 --PPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred --CCCccccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 0111123456889999999999999999999976
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=323.31 Aligned_cols=254 Identities=28% Similarity=0.437 Sum_probs=202.6
Q ss_pred CCceeeeEEeecCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeecc
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIH 578 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~ 578 (897)
++|++.++||+|+||.||+|+++++..||+|+++.... ..++|.+|++++++++|+||+++++++.+ ...++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~ 83 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 83 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcCC
Confidence 56889999999999999999987777899999975332 34679999999999999999999998754 56799999999
Q ss_pred CCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCc
Q 002647 579 NGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNK 658 (897)
Q Consensus 579 gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~ 658 (897)
+|+|.+++... ....+++..++.++.|+++||+|||+.+ |+||||||+||++++++.+||+|||+++.......
T Consensus 84 ~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~- 157 (262)
T cd05071 84 KGSLLDFLKGE--MGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY- 157 (262)
T ss_pred CCcHHHHHhhc--cccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcccEEEcCCCcEEeccCCceeecccccc-
Confidence 99999999642 2345899999999999999999999887 99999999999999999999999999975432221
Q ss_pred ccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccccccchh
Q 002647 659 HISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVI 737 (897)
Q Consensus 659 ~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l 737 (897)
.......++..|+|||+..+..++.++||||||+++|||+| |+.||...... .... .... . .
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~---~~~~---~~~~-~--~-------- 220 (262)
T cd05071 158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR---EVLD---QVER-G--Y-------- 220 (262)
T ss_pred ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH---HHHH---HHhc-C--C--------
Confidence 11223346678999999988899999999999999999999 88888643211 1110 0000 0 0
Q ss_pred ccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 002647 738 ESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLV 777 (897)
Q Consensus 738 ~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l 777 (897)
......+....+.+|+.+|++.+|++||++.++++.|+..
T Consensus 221 ~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 221 RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred CCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 0011223445688999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-37 Score=332.74 Aligned_cols=259 Identities=26% Similarity=0.436 Sum_probs=204.5
Q ss_pred hCCceeeeEEeecCceEEEEEEec------CCCEEEEEEeeccc-ccchHHHHHHHHHHhhc-cCCceeeEeeeeecCCc
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILD------DGREVAVKVLKRAN-QHGGREFLAELEMLSRL-HHRNLVKLFGVCIEDNN 569 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~------~g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~~~ 569 (897)
.++|.+.+.||+|+||.||+|... ++..||||.++... ....+.+.+|+++++++ +|+||+++++++...+.
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 356889999999999999999742 34579999987543 23345789999999999 79999999999999999
Q ss_pred eEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcc
Q 002647 570 RCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLA 649 (897)
Q Consensus 570 ~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLA 649 (897)
.++||||+.+|+|.++++... ...+++.+++.++.|++.||+|||+.+ |+|+||||+|||++.++.+||+|||++
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~dfg~~ 188 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRKR--ESFLTLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNVLLTHGKIVKICDFGLA 188 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eehhhhccceEEEcCCCeEEECCCccc
Confidence 999999999999999996422 234899999999999999999999887 999999999999999999999999999
Q ss_pred hhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhccccccc
Q 002647 650 RTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEG 728 (897)
Q Consensus 650 r~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~ 728 (897)
+...............++..|+|||.+....++.++|||||||++|||++ |+.||...... ..+...... .
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~--~~~~~~~~~------~ 260 (302)
T cd05055 189 RDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVD--SKFYKLIKE------G 260 (302)
T ss_pred ccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCch--HHHHHHHHc------C
Confidence 86543322222223446778999999998899999999999999999998 99998643221 111111100 0
Q ss_pred ccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 002647 729 LKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLV 777 (897)
Q Consensus 729 l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l 777 (897)
. ..........++.+++.+||+.+|++||++.||++.|+++
T Consensus 261 ~--------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 261 Y--------RMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred C--------cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 0 0001112235688999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-37 Score=349.38 Aligned_cols=262 Identities=24% Similarity=0.397 Sum_probs=204.5
Q ss_pred hCCceeeeEEeecCceEEEEEEec------CCCEEEEEEeecccc-cchHHHHHHHHHHhhcc-CCceeeEeeeeecCCc
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILD------DGREVAVKVLKRANQ-HGGREFLAELEMLSRLH-HRNLVKLFGVCIEDNN 569 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~------~g~~VAVK~lk~~~~-~~~~~f~~Ev~iL~~L~-HpNIV~Llg~~~~~~~ 569 (897)
.++|.+.++||+|+||.||+|++. .+..||||+++.... ...+.+.+|+++|.++. |+||++++++|...+.
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~ 115 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGP 115 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCC
Confidence 445777899999999999999853 346799999975432 22357889999999997 9999999999999899
Q ss_pred eEEEEeeccCCccccccccCCC----------------------------------------------------------
Q 002647 570 RCLVYELIHNGSLESHLHGDDK---------------------------------------------------------- 591 (897)
Q Consensus 570 ~~LV~Ey~~gGSL~~~L~~~~~---------------------------------------------------------- 591 (897)
.++||||+++|+|.++|+....
T Consensus 116 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (401)
T cd05107 116 IYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDM 195 (401)
T ss_pred cEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcc
Confidence 9999999999999999864321
Q ss_pred ------------------------------------CCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEE
Q 002647 592 ------------------------------------VNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILL 635 (897)
Q Consensus 592 ------------------------------------~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILL 635 (897)
....+++..+++|+.|++.||+|||+.+ |+||||||+|||+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrdlkp~NiLl 272 (401)
T cd05107 196 KGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN---CVHRDLAARNVLI 272 (401)
T ss_pred hhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---cCcccCCcceEEE
Confidence 1124788889999999999999999877 9999999999999
Q ss_pred ccCCceEEeccCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchh
Q 002647 636 EHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQEN 714 (897)
Q Consensus 636 d~~~~vKLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~ 714 (897)
++++.+||+|||+++...............++..|+|||++....++.++|||||||++|||++ |+.||......+ .
T Consensus 273 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~--~ 350 (401)
T cd05107 273 CEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE--Q 350 (401)
T ss_pred eCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH--H
Confidence 9999999999999986433222112223456789999999998889999999999999999998 888986432111 1
Q ss_pred hHHhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 002647 715 LVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVC 778 (897)
Q Consensus 715 lv~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~ 778 (897)
+... .... . ....+......+.+|+.+||+.+|.+||+++||++.|+.+.
T Consensus 351 ~~~~----~~~~--~--------~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 351 FYNA----IKRG--Y--------RMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred HHHH----HHcC--C--------CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 1000 0000 0 00112223457889999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-37 Score=343.65 Aligned_cols=255 Identities=20% Similarity=0.272 Sum_probs=200.6
Q ss_pred HhhCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceE
Q 002647 496 KATNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRC 571 (897)
Q Consensus 496 ~at~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~ 571 (897)
...++|++.++||+|+||+||++... +++.||+|++.... ....+.+.+|+++++.++|+||+++++++.+++..+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~ 119 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY 119 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 34578999999999999999999965 68899999997532 223355788999999999999999999999999999
Q ss_pred EEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchh
Q 002647 572 LVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLART 651 (897)
Q Consensus 572 LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~ 651 (897)
+||||+++|+|.+++.. ..+++..+..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++.
T Consensus 120 lv~Ey~~gg~L~~~l~~-----~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~kL~DfG~~~~ 191 (370)
T cd05596 120 MVMEYMPGGDLVNLMSN-----YDIPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMK 191 (370)
T ss_pred EEEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEcCCCCEEEEeccceee
Confidence 99999999999999853 34788899999999999999999987 99999999999999999999999999976
Q ss_pred cccCCCcccccccccccccCChhhhhcC----CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccc
Q 002647 652 ALDEGNKHISTHVMGTFGYLAPEYAMTG----HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKE 727 (897)
Q Consensus 652 ~~~~~~~~~~t~~~GT~~Y~APE~l~~~----~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e 727 (897)
..... ........||+.|+|||++... .++.++|||||||+||||++|+.||....... . ...+.....
T Consensus 192 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~---~---~~~i~~~~~ 264 (370)
T cd05596 192 MDANG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG---T---YSKIMDHKN 264 (370)
T ss_pred ccCCC-cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHH---H---HHHHHcCCC
Confidence 43221 1122346799999999998753 47889999999999999999999997533211 1 011111000
Q ss_pred cccccccchhccCCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 002647 728 GLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSH--RPFMGEVVQA 773 (897)
Q Consensus 728 ~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~--RPTm~EVl~~ 773 (897)
. +. ... .......+.+++..||+.+|++ |+++.|+++.
T Consensus 265 ~---~~---~~~--~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 265 S---LT---FPD--DIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred c---CC---CCC--cCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 0 00 000 1122356778999999999987 9999999765
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=330.48 Aligned_cols=261 Identities=28% Similarity=0.433 Sum_probs=202.6
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCC--EEEEEEeeccc-ccchHHHHHHHHHHhhc-cCCceeeEeeeeecCCceEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGR--EVAVKVLKRAN-QHGGREFLAELEMLSRL-HHRNLVKLFGVCIEDNNRCLV 573 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~--~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~~~~~LV 573 (897)
++|++.+.||+|+||.||+|.++ ++. .+|+|.++... .....++.+|++++.++ +|+||+++++++.+++..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 57888999999999999999964 454 45777776432 23346788999999999 899999999999999999999
Q ss_pred EeeccCCccccccccCCC------------CCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCce
Q 002647 574 YELIHNGSLESHLHGDDK------------VNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTP 641 (897)
Q Consensus 574 ~Ey~~gGSL~~~L~~~~~------------~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~v 641 (897)
|||+++|+|.++++.... ....+++.+++.++.|++.||+|||+.+ |+||||||+|||+++++.+
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEecCCCcE
Confidence 999999999999864321 1235899999999999999999999887 9999999999999999999
Q ss_pred EEeccCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhh
Q 002647 642 KVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWAR 720 (897)
Q Consensus 642 KLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~ 720 (897)
||+|||+++.... ........++..|+|||++....++.++|||||||++|||+| |..||...... .......
T Consensus 164 kl~dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---~~~~~~~ 237 (303)
T cd05088 164 KIADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA---ELYEKLP 237 (303)
T ss_pred EeCccccCcccch---hhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH---HHHHHHh
Confidence 9999999863211 011112234668999999988888999999999999999998 99998643221 1111110
Q ss_pred hcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHhhhh
Q 002647 721 PLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNEFD 782 (897)
Q Consensus 721 ~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~~e~~ 782 (897)
.. .....+......+.+|+.+||+.+|++||++.++++.|+.+.++..
T Consensus 238 ------~~--------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~ 285 (303)
T cd05088 238 ------QG--------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 285 (303)
T ss_pred ------cC--------CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhh
Confidence 00 0000111223457899999999999999999999999987755443
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-37 Score=322.89 Aligned_cols=246 Identities=28% Similarity=0.426 Sum_probs=194.5
Q ss_pred EEeecCceEEEEEEe---cCCCEEEEEEeeccc--ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccCC
Q 002647 506 IIGEGGFGVVYRGIL---DDGREVAVKVLKRAN--QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNG 580 (897)
Q Consensus 506 ~LG~G~fGtVyka~l---~~g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~gG 580 (897)
.||+|+||.||+|.+ +++..+|+|+++... ....+++.+|+.++++++|+||+++++++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 589999999999975 357889999987433 223467899999999999999999999885 45679999999999
Q ss_pred ccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcc-
Q 002647 581 SLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH- 659 (897)
Q Consensus 581 SL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~- 659 (897)
+|.+++.. ...+++..++.++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++.........
T Consensus 81 ~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 153 (257)
T cd05116 81 PLNKFLQK----NKHVTEKNITELVHQVSMGMKYLEETN---FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK 153 (257)
T ss_pred cHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchhhEEEcCCCeEEECCCccccccCCCCCeee
Confidence 99999853 346899999999999999999999887 9999999999999999999999999998653322211
Q ss_pred cccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccccccchhc
Q 002647 660 ISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIE 738 (897)
Q Consensus 660 ~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~ 738 (897)
......++..|+|||.+....++.++||||||+++|||++ |+.||...... .+..... ... .
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~~~~i~----~~~----------~ 216 (257)
T cd05116 154 AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN---EVTQMIE----SGE----------R 216 (257)
T ss_pred ecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHH----CCC----------C
Confidence 1122334678999999988888999999999999999998 99999643221 1111111 000 0
Q ss_pred cCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002647 739 SNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKL 776 (897)
Q Consensus 739 ~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~ 776 (897)
...+......+.+++.+||+.||++||++.+|++.|+.
T Consensus 217 ~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 217 MECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred CCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 01122234567899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=335.03 Aligned_cols=243 Identities=24% Similarity=0.358 Sum_probs=191.4
Q ss_pred eEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhc-cCCceeeEeeeeecCCceEEEEeeccC
Q 002647 505 RIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRL-HHRNLVKLFGVCIEDNNRCLVYELIHN 579 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~~~~~LV~Ey~~g 579 (897)
++||+|+||+||+|... +++.||+|+++... ....+.+.+|+.++.++ +|+||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 47999999999999965 67899999997532 22335677899988877 899999999999999999999999999
Q ss_pred CccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcc
Q 002647 580 GSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH 659 (897)
Q Consensus 580 GSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~ 659 (897)
|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 ~~L~~~~~~----~~~l~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~--~ 151 (329)
T cd05618 81 GDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG--D 151 (329)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCCEEEeeCCccccccCCC--C
Confidence 999988843 346999999999999999999999988 9999999999999999999999999987532221 1
Q ss_pred cccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCc--hhhHHhhhhcccccccccccccchh
Q 002647 660 ISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQ--ENLVAWARPLLTTKEGLKTIIDPVI 737 (897)
Q Consensus 660 ~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~--~~lv~w~~~l~~~~e~l~~iiDp~l 737 (897)
......||..|+|||++.+..++.++|||||||++|||++|+.||+....... .....+....... ..
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~---------~~- 221 (329)
T cd05618 152 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE---------KQ- 221 (329)
T ss_pred ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhc---------CC-
Confidence 22346799999999999999999999999999999999999999964222111 1111111111100 00
Q ss_pred ccCCCHHHHHHHHHHHHHccCCCCCCCCCH
Q 002647 738 ESNISYDTLVKVAAIASMCVQPEVSHRPFM 767 (897)
Q Consensus 738 ~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm 767 (897)
..++......+.+++.+||+.||++||+.
T Consensus 222 -~~~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 222 -IRIPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred -CCCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 01222334567899999999999999983
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=320.74 Aligned_cols=252 Identities=24% Similarity=0.367 Sum_probs=200.8
Q ss_pred CCceeeeEEeecCceEEEEEEe-cCCCEEEEEEeecccc-----cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRANQ-----HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCL 572 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~~~-----~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~L 572 (897)
++|.+.+.||+|++|.||+|.. .+++.||+|.+..... ...+.+.+|++++++++|+||+++++++.+++..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 5788999999999999999996 4689999999864321 123568899999999999999999999999999999
Q ss_pred EEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhc
Q 002647 573 VYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTA 652 (897)
Q Consensus 573 V~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~ 652 (897)
|+||+++++|.+++.. ...+++..+.+++.|++.||.|||+.+ |+||||||+||++++++.+||+|||+++..
T Consensus 82 v~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nilv~~~~~~~l~dfg~~~~~ 154 (263)
T cd06625 82 FMEYMPGGSVKDQLKA----YGALTETVTRKYTRQILEGVEYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRL 154 (263)
T ss_pred EEEECCCCcHHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceec
Confidence 9999999999999853 346889999999999999999999988 999999999999999999999999998754
Q ss_pred ccCCCcc-cccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccc
Q 002647 653 LDEGNKH-ISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKT 731 (897)
Q Consensus 653 ~~~~~~~-~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~ 731 (897)
....... ......++..|+|||++.+..++.++||||||+++|||++|+.||...+. .....+.. . ...
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~---~~~~~~~~---~-~~~--- 224 (263)
T cd06625 155 QTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA---MAAIFKIA---T-QPT--- 224 (263)
T ss_pred cccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccch---HHHHHHHh---c-cCC---
Confidence 3211111 11235678899999999988899999999999999999999999864321 11111100 0 000
Q ss_pred cccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 732 IIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 732 iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
....+......+.+++.+||..+|++||++.|+++.
T Consensus 225 ------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 225 ------NPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred ------CCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 011122233567889999999999999999999764
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=341.73 Aligned_cols=201 Identities=26% Similarity=0.346 Sum_probs=172.3
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEe
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYE 575 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~E 575 (897)
.|...++||+|+||+||+|+.. +++.||||++.... ....+.+.+|+++|++++|+||+++++.+.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5889999999999999999964 68899999997532 2234578899999999999999999999999999999999
Q ss_pred eccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccC
Q 002647 576 LIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655 (897)
Q Consensus 576 y~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~ 655 (897)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~gg~L~~~l~~----~~~~~e~~~~~~~~qi~~al~~lH~~~---ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~ 154 (382)
T cd05625 82 YIPGGDMMSLLIR----MGIFPEDLARFYIAELTCAVESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (382)
T ss_pred CCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEeECCCCcccccc
Confidence 9999999999853 346889999999999999999999988 999999999999999999999999997532100
Q ss_pred C---------------------------------------------CcccccccccccccCChhhhhcCCCCccccEEec
Q 002647 656 G---------------------------------------------NKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSY 690 (897)
Q Consensus 656 ~---------------------------------------------~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSf 690 (897)
. .........||+.|+|||++.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (382)
T cd05625 155 HDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSV 234 (382)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEec
Confidence 0 0001123569999999999999999999999999
Q ss_pred hhHHHHHHhCCCCCCCC
Q 002647 691 GVVLLELLTGRKPVDLS 707 (897)
Q Consensus 691 GvIL~ELlTGk~Pfd~~ 707 (897)
||+||||++|+.||...
T Consensus 235 Gvil~elltG~~Pf~~~ 251 (382)
T cd05625 235 GVILYEMLVGQPPFLAQ 251 (382)
T ss_pred hHHHHHHHhCCCCCCCC
Confidence 99999999999999754
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=318.99 Aligned_cols=247 Identities=30% Similarity=0.428 Sum_probs=197.4
Q ss_pred eEEeecCceEEEEEEecCCCEEEEEEeecccc-cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccCCccc
Q 002647 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRANQ-HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLE 583 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~-~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~gGSL~ 583 (897)
++||+|+||.||+|...++..||+|.++.... .....|.+|++++++++|+||+++++++...+..++||||+++|+|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 36999999999999988899999999875432 22346889999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcccccc
Q 002647 584 SHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTH 663 (897)
Q Consensus 584 ~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~~~t~ 663 (897)
+++... ...+++..++.++.|++.+|.|||+.+ ++||||||+||++++++.+||+|||++....... ......
T Consensus 81 ~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~-~~~~~~ 153 (250)
T cd05085 81 SFLRKK---KDELKTKQLVKFALDAAAGMAYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGI-YSSSGL 153 (250)
T ss_pred HHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccChheEEEcCCCeEEECCCccceeccccc-cccCCC
Confidence 998532 346899999999999999999999887 9999999999999999999999999987532211 111122
Q ss_pred cccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccccccchhccCCC
Q 002647 664 VMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESNIS 742 (897)
Q Consensus 664 ~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~ 742 (897)
..++..|+|||++....++.++||||||+++|||++ |..||...... ........ .. ....+
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~---~~~~~~~~----~~----------~~~~~ 216 (250)
T cd05085 154 KQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ---QAREQVEK----GY----------RMSCP 216 (250)
T ss_pred CCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH---HHHHHHHc----CC----------CCCCC
Confidence 344678999999998899999999999999999998 99998643211 11111100 00 00112
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 002647 743 YDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775 (897)
Q Consensus 743 ~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~ 775 (897)
......+.+++.+|++.+|++||++.|+++.|.
T Consensus 217 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 217 QKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 223457889999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-37 Score=347.70 Aligned_cols=261 Identities=26% Similarity=0.387 Sum_probs=218.1
Q ss_pred hhCCceeeeEEeecCceEEEEEEecC-CCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEe
Q 002647 497 ATNGFHTSRIIGEGGFGVVYRGILDD-GREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYE 575 (897)
Q Consensus 497 at~~y~~~~~LG~G~fGtVyka~l~~-g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~E 575 (897)
...++.+..+||-|-||.||.|+|+. .-.||||.++.+. -..++|++|..+|+.++|||+|+|+|+|..+..+|||+|
T Consensus 265 eRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTE 343 (1157)
T KOG4278|consen 265 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITE 343 (1157)
T ss_pred cchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEe
Confidence 34456678999999999999999874 5679999998653 345899999999999999999999999999999999999
Q ss_pred eccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccC
Q 002647 576 LIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655 (897)
Q Consensus 576 y~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~ 655 (897)
||.+|+|.+||+... ...++.-..+.++.||+.||+||...+ +|||||.++|+|+.++..|||+||||++.+..+
T Consensus 344 fM~yGNLLdYLRecn--r~ev~avvLlyMAtQIsSaMeYLEkkn---FIHRDLAARNCLVgEnhiVKvADFGLsRlMtgD 418 (1157)
T KOG4278|consen 344 FMCYGNLLDYLRECN--RSEVPAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHIVKVADFGLSRLMTGD 418 (1157)
T ss_pred cccCccHHHHHHHhc--hhhcchhHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhccccccceEEeeccchhhhhcCC
Confidence 999999999998654 345777888999999999999999887 999999999999999999999999999987543
Q ss_pred CCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhccccccccccccc
Q 002647 656 GNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIID 734 (897)
Q Consensus 656 ~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiD 734 (897)
.+. ......-.+.|.|||-+..+.++.|+|||+|||+|||+.| |..||.+.+.. .+..+++
T Consensus 419 TYT-AHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlS-----------------qVY~LLE 480 (1157)
T KOG4278|consen 419 TYT-AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-----------------QVYGLLE 480 (1157)
T ss_pred cee-cccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHH-----------------HHHHHHh
Confidence 332 1122233678999999999999999999999999999998 88888643211 1222333
Q ss_pred chhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHhhh
Q 002647 735 PVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNEF 781 (897)
Q Consensus 735 p~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~~e~ 781 (897)
...+-+.+..|..++.+|++.||+.+|.+||+++|+.+.++.+..+-
T Consensus 481 kgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~s 527 (1157)
T KOG4278|consen 481 KGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSS 527 (1157)
T ss_pred ccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhccc
Confidence 33444456778889999999999999999999999999999876543
|
|
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=341.45 Aligned_cols=257 Identities=21% Similarity=0.289 Sum_probs=198.8
Q ss_pred HHHhhCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCc
Q 002647 494 IEKATNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNN 569 (897)
Q Consensus 494 i~~at~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~ 569 (897)
+....++|++.++||+|+||.||++... +++.||+|++.... ....+.+.+|+++++.++|+||+++++++.+++.
T Consensus 38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (370)
T cd05621 38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKY 117 (370)
T ss_pred cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence 3445678999999999999999999965 57899999986422 2234568899999999999999999999999999
Q ss_pred eEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcc
Q 002647 570 RCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLA 649 (897)
Q Consensus 570 ~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLA 649 (897)
.++||||+++|+|.+++.. ..+++.++..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||++
T Consensus 118 ~~lv~Ey~~gg~L~~~l~~-----~~~~~~~~~~~~~qil~aL~~LH~~~---IvHrDLKp~NILl~~~~~~kL~DFG~a 189 (370)
T cd05621 118 LYMVMEYMPGGDLVNLMSN-----YDVPEKWAKFYTAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTC 189 (370)
T ss_pred EEEEEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEEecccc
Confidence 9999999999999999852 24888999999999999999999988 999999999999999999999999999
Q ss_pred hhcccCCCcccccccccccccCChhhhhcC----CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccc
Q 002647 650 RTALDEGNKHISTHVMGTFGYLAPEYAMTG----HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTT 725 (897)
Q Consensus 650 r~~~~~~~~~~~t~~~GT~~Y~APE~l~~~----~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~ 725 (897)
+...... ........||+.|+|||++... .++.++|||||||+||||++|+.||....... . ...+...
T Consensus 190 ~~~~~~~-~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~---~---~~~i~~~ 262 (370)
T cd05621 190 MKMDETG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVG---T---YSKIMDH 262 (370)
T ss_pred eecccCC-ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHH---H---HHHHHhC
Confidence 8653222 1122356799999999998754 37889999999999999999999997432211 0 1111110
Q ss_pred cccccccccchhccCCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 002647 726 KEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSH--RPFMGEVVQA 773 (897)
Q Consensus 726 ~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~--RPTm~EVl~~ 773 (897)
...+. ... .......+.+++..|+..++.+ |+++.|+++.
T Consensus 263 ~~~~~------~p~--~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 263 KNSLN------FPE--DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred CcccC------CCC--cccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 00000 000 1122345677888898765543 8899998764
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-37 Score=344.38 Aligned_cols=248 Identities=24% Similarity=0.326 Sum_probs=204.3
Q ss_pred HhhCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccc---cchHHHHHHHHHHhhccCCceeeEeeeeecCCceE
Q 002647 496 KATNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQ---HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRC 571 (897)
Q Consensus 496 ~at~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~---~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~ 571 (897)
...++|+++.+||+|+||.||+|+.+ +|..+|+|++++..- .+.+..+.|-.+|...+++.||+|+..|.+.+.+|
T Consensus 138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LY 217 (550)
T KOG0605|consen 138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLY 217 (550)
T ss_pred CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeE
Confidence 35688999999999999999999954 699999999987543 34456788999999999999999999999999999
Q ss_pred EEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchh
Q 002647 572 LVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLART 651 (897)
Q Consensus 572 LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~ 651 (897)
|||||++||++..+|. ..+.|++..+..++.+.+.|++-||+.| +|||||||+|+|||..|++||+||||+.-
T Consensus 218 LiMEylPGGD~mTLL~----~~~~L~e~~arfYiaE~vlAI~~iH~~g---yIHRDIKPdNlLiD~~GHiKLSDFGLs~g 290 (550)
T KOG0605|consen 218 LIMEYLPGGDMMTLLM----RKDTLTEDWARFYIAETVLAIESIHQLG---YIHRDIKPDNLLIDAKGHIKLSDFGLSTG 290 (550)
T ss_pred EEEEecCCccHHHHHH----hcCcCchHHHHHHHHHHHHHHHHHHHcC---cccccCChhheeecCCCCEeeccccccch
Confidence 9999999999999994 3567999999999999999999999998 99999999999999999999999999852
Q ss_pred ccc------------------C---CCcc-----c-------------------ccccccccccCChhhhhcCCCCcccc
Q 002647 652 ALD------------------E---GNKH-----I-------------------STHVMGTFGYLAPEYAMTGHLLVKSD 686 (897)
Q Consensus 652 ~~~------------------~---~~~~-----~-------------------~t~~~GT~~Y~APE~l~~~~~t~kSD 686 (897)
+.. . .... . ....+|||.|||||++.+..|+..+|
T Consensus 291 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cD 370 (550)
T KOG0605|consen 291 LDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECD 370 (550)
T ss_pred hhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCcccc
Confidence 211 0 0000 0 01247999999999999999999999
Q ss_pred EEechhHHHHHHhCCCCCCCCCCCC-chhhHHhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCC
Q 002647 687 VYSYGVVLLELLTGRKPVDLSQPPG-QENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRP 765 (897)
Q Consensus 687 VwSfGvIL~ELlTGk~Pfd~~~~~~-~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RP 765 (897)
.||||||+||||.|.+||....+.+ ..+++.|...+....+ .+...+..+||.+|+. ||++|-
T Consensus 371 wWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~---------------~~~s~eA~DLI~rll~-d~~~RL 434 (550)
T KOG0605|consen 371 WWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEE---------------VDLSDEAKDLITRLLC-DPENRL 434 (550)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCc---------------CcccHHHHHHHHHHhc-CHHHhc
Confidence 9999999999999999998766543 3466777644432211 1112456789999998 999996
Q ss_pred C
Q 002647 766 F 766 (897)
Q Consensus 766 T 766 (897)
-
T Consensus 435 G 435 (550)
T KOG0605|consen 435 G 435 (550)
T ss_pred C
Confidence 5
|
|
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=321.66 Aligned_cols=248 Identities=25% Similarity=0.450 Sum_probs=195.1
Q ss_pred EEeecCceEEEEEEec---CCCEEEEEEeecccc-cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccCCc
Q 002647 506 IIGEGGFGVVYRGILD---DGREVAVKVLKRANQ-HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGS 581 (897)
Q Consensus 506 ~LG~G~fGtVyka~l~---~g~~VAVK~lk~~~~-~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~gGS 581 (897)
.||+|+||.||+|++. ++..||+|++..... ...+.|.+|+.++++++|+||+++++++.. ...++||||+++|+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCC
Confidence 3899999999999864 355799999875432 234568999999999999999999998854 57899999999999
Q ss_pred cccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcc-c
Q 002647 582 LESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH-I 660 (897)
Q Consensus 582 L~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~-~ 660 (897)
|.+++.. ....+++.++++++.|++.||+|||+.+ ++||||||+|||++.++.+||+|||+++......... .
T Consensus 81 L~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 154 (257)
T cd05115 81 LNKFLSG---KKDEITVSNVVELMHQVSMGMKYLEGKN---FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKA 154 (257)
T ss_pred HHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhcC---eeecccchheEEEcCCCcEEeccCCccccccCCccceec
Confidence 9999853 2346899999999999999999999987 9999999999999999999999999997543322211 1
Q ss_pred ccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccccccchhcc
Q 002647 661 STHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIES 739 (897)
Q Consensus 661 ~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~ 739 (897)
.+...++..|+|||++....++.++||||||+++|||++ |+.||...... .+..... . .. ..
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---~~~~~~~---~-~~----------~~ 217 (257)
T cd05115 155 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP---EVMSFIE---Q-GK----------RL 217 (257)
T ss_pred cCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH---HHHHHHH---C-CC----------CC
Confidence 122234578999999988889999999999999999996 99999643221 1111111 0 00 01
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 002647 740 NISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLV 777 (897)
Q Consensus 740 ~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l 777 (897)
..+..+..++.+++.+||+.+|++||++.+|.+.|+.+
T Consensus 218 ~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 218 DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 12223446788899999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-37 Score=339.64 Aligned_cols=263 Identities=27% Similarity=0.422 Sum_probs=202.3
Q ss_pred hCCceeeeEEeecCceEEEEEEe------cCCCEEEEEEeeccc-ccchHHHHHHHHHHhhc-cCCceeeEeeeeecC-C
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGIL------DDGREVAVKVLKRAN-QHGGREFLAELEMLSRL-HHRNLVKLFGVCIED-N 568 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l------~~g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~-~ 568 (897)
.++|++.+.||+|+||+||+|.. .+++.||||+++... ....+.+.+|+++|.++ +|+||++++++|... .
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 35788999999999999999973 346889999997533 22345788999999999 689999999988654 4
Q ss_pred ceEEEEeeccCCccccccccCCC---------------------------------------------------------
Q 002647 569 NRCLVYELIHNGSLESHLHGDDK--------------------------------------------------------- 591 (897)
Q Consensus 569 ~~~LV~Ey~~gGSL~~~L~~~~~--------------------------------------------------------- 591 (897)
..++||||+++|+|.++++....
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 67899999999999999864211
Q ss_pred ------CCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcccccccc
Q 002647 592 ------VNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVM 665 (897)
Q Consensus 592 ------~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~~~t~~~ 665 (897)
....+++.++.+++.|+++||+|||+.+ |+||||||+|||+++++.+||+|||+++...............
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 242 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR 242 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence 0124788999999999999999999887 9999999999999999999999999998653322222222334
Q ss_pred cccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccccccchhccCCCHH
Q 002647 666 GTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESNISYD 744 (897)
Q Consensus 666 GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~~e 744 (897)
++..|+|||++....++.++||||||+++|||++ |..||...... ..+.. . ..... . ...+..
T Consensus 243 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~---~-~~~~~--~--------~~~~~~ 306 (343)
T cd05103 243 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--EEFCR---R-LKEGT--R--------MRAPDY 306 (343)
T ss_pred CCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc--HHHHH---H-HhccC--C--------CCCCCC
Confidence 5678999999988899999999999999999997 99998643221 11110 0 00000 0 000111
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHh
Q 002647 745 TLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCN 779 (897)
Q Consensus 745 ~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~~ 779 (897)
....+.+++..||+.||++||++.||++.|+.+.+
T Consensus 307 ~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 307 TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 22457889999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=334.60 Aligned_cols=242 Identities=24% Similarity=0.342 Sum_probs=193.4
Q ss_pred eEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhc-cCCceeeEeeeeecCCceEEEEeeccC
Q 002647 505 RIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRL-HHRNLVKLFGVCIEDNNRCLVYELIHN 579 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~~~~~LV~Ey~~g 579 (897)
++||+|+||+||+|+.. +++.||||+++... ....+.+..|.+++..+ +|+||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999965 57899999997532 23345677899999876 799999999999999999999999999
Q ss_pred CccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcc
Q 002647 580 GSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH 659 (897)
Q Consensus 580 GSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~ 659 (897)
|+|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 ~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~--~ 151 (321)
T cd05591 81 GDLMFQIQR----SRKFDEPRSRFYAAEVTLALMFLHRHG---VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG--V 151 (321)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeecccceecccCC--c
Confidence 999988853 346899999999999999999999988 9999999999999999999999999987543221 2
Q ss_pred cccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhcc
Q 002647 660 ISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIES 739 (897)
Q Consensus 660 ~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~ 739 (897)
......||..|+|||++.+..++.++|||||||++|||++|+.||..... ..+.. .+.... ..
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~---~~~~~---~i~~~~-----~~------ 214 (321)
T cd05591 152 TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNE---DDLFE---SILHDD-----VL------ 214 (321)
T ss_pred cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCH---HHHHH---HHHcCC-----CC------
Confidence 23346799999999999998999999999999999999999999975432 11111 111100 00
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCC-------CHHHHHHH
Q 002647 740 NISYDTLVKVAAIASMCVQPEVSHRP-------FMGEVVQA 773 (897)
Q Consensus 740 ~~~~e~~~~L~~Li~~CL~~dP~~RP-------Tm~EVl~~ 773 (897)
.+......+.+++..||+.||++|+ ++.++++.
T Consensus 215 -~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 215 -YPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred -CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 1111234678899999999999999 67776543
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=319.75 Aligned_cols=255 Identities=29% Similarity=0.464 Sum_probs=205.5
Q ss_pred hCCceeeeEEeecCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeec
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELI 577 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~ 577 (897)
.++|.+.++||+|+||.||+|..+++..||||.+.... ...+++.+|++++++++|+||+++++++......++||||+
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 83 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM 83 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence 46789999999999999999998888899999987543 33478999999999999999999999999888999999999
Q ss_pred cCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCC
Q 002647 578 HNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN 657 (897)
Q Consensus 578 ~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~ 657 (897)
++++|.+++.... ...+++.+++.++.|++.||+|||+.+ |+|+||||+||++++++.+||+|||+++......
T Consensus 84 ~~~~L~~~i~~~~--~~~~~~~~~~~~~~~i~~al~~lh~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~- 157 (261)
T cd05034 84 SKGSLLDFLKSGE--GKKLRLPQLVDMAAQIAEGMAYLESRN---YIHRDLAARNILVGENLVCKIADFGLARLIEDDE- 157 (261)
T ss_pred CCCCHHHHHhccc--cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcchheEEEcCCCCEEECccccceeccchh-
Confidence 9999999996432 346899999999999999999999987 9999999999999999999999999987653211
Q ss_pred cccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccccccch
Q 002647 658 KHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPV 736 (897)
Q Consensus 658 ~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~ 736 (897)
........++..|+|||.+.+..++.++||||||+++|||+| |+.||..... ......... ...
T Consensus 158 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~---~~~~~~~~~------~~~------ 222 (261)
T cd05034 158 YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN---REVLEQVER------GYR------ 222 (261)
T ss_pred hhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHc------CCC------
Confidence 111122334568999999998889999999999999999999 9999864321 111111100 000
Q ss_pred hccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002647 737 IESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKL 776 (897)
Q Consensus 737 l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~ 776 (897)
...+.+....+.+++.+|++.+|++||+++|+++.|+.
T Consensus 223 --~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 223 --MPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred --CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 00111224568899999999999999999999988864
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-37 Score=338.53 Aligned_cols=257 Identities=27% Similarity=0.360 Sum_probs=204.1
Q ss_pred HHhhCCceeeeEEeecCceEEEEEEe-cCCCEEEEEEeecccc--------------cchHHHHHHHHHHhhccCCceee
Q 002647 495 EKATNGFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRANQ--------------HGGREFLAELEMLSRLHHRNLVK 559 (897)
Q Consensus 495 ~~at~~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~~~--------------~~~~~f~~Ev~iL~~L~HpNIV~ 559 (897)
.+..++|++.+.||+|.||.|-+|.. .+++.||||++.+... ...+...+||.+|++|+|+|||+
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 34568899999999999999999995 4789999999954221 11357889999999999999999
Q ss_pred EeeeeecC--CceEEEEeeccCCccccccccCCCCCCC-CCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEc
Q 002647 560 LFGVCIED--NNRCLVYELIHNGSLESHLHGDDKVNGP-LDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLE 636 (897)
Q Consensus 560 Llg~~~~~--~~~~LV~Ey~~gGSL~~~L~~~~~~~~~-Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd 636 (897)
|+++..+. +..|||+|||..|.+...= ..++ |++.++++++.++..||+|||.++ ||||||||+|+||+
T Consensus 173 LiEvLDDP~s~~~YlVley~s~G~v~w~p-----~d~~els~~~Ar~ylrDvv~GLEYLH~Qg---iiHRDIKPsNLLl~ 244 (576)
T KOG0585|consen 173 LIEVLDDPESDKLYLVLEYCSKGEVKWCP-----PDKPELSEQQARKYLRDVVLGLEYLHYQG---IIHRDIKPSNLLLS 244 (576)
T ss_pred EEEeecCcccCceEEEEEeccCCccccCC-----CCcccccHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEEc
Confidence 99998754 5789999999999886543 2234 999999999999999999999998 99999999999999
Q ss_pred cCCceEEeccCcchhcccC---CCcccccccccccccCChhhhhcCC---C-CccccEEechhHHHHHHhCCCCCCCCCC
Q 002647 637 HDFTPKVSDFGLARTALDE---GNKHISTHVMGTFGYLAPEYAMTGH---L-LVKSDVYSYGVVLLELLTGRKPVDLSQP 709 (897)
Q Consensus 637 ~~~~vKLsDFGLAr~~~~~---~~~~~~t~~~GT~~Y~APE~l~~~~---~-t~kSDVwSfGvIL~ELlTGk~Pfd~~~~ 709 (897)
++|+|||+|||.+...... +.........||+.|+|||...++. + ..+.||||+||.||.|+.|+.||.....
T Consensus 245 ~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~ 324 (576)
T KOG0585|consen 245 SDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE 324 (576)
T ss_pred CCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH
Confidence 9999999999998754221 1122233478999999999887643 2 5688999999999999999999964221
Q ss_pred CCchhhHHhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 002647 710 PGQENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775 (897)
Q Consensus 710 ~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~ 775 (897)
. +..+.|++..+.-....+..+.+.+||+++|++||++|.++.+|.....
T Consensus 325 ------~----------~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpw 374 (576)
T KOG0585|consen 325 ------L----------ELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPW 374 (576)
T ss_pred ------H----------HHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecce
Confidence 1 1122333333333333356678899999999999999999999977654
|
|
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=319.94 Aligned_cols=249 Identities=30% Similarity=0.481 Sum_probs=203.8
Q ss_pred CCceeeeEEeecCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeecc
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIH 578 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~ 578 (897)
++|++.+.||+|+||.||+|... |+.||||.++.... ..+++.+|+.++++++|+||+++++++..+...++||||++
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 83 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA 83 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence 46788899999999999999876 88999999986544 45789999999999999999999999998899999999999
Q ss_pred CCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCc
Q 002647 579 NGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNK 658 (897)
Q Consensus 579 gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~ 658 (897)
+++|.+++.... ...+++..+..++.|++.||.|||+.+ |+|+||||+||+++.++.+||+|||+++......
T Consensus 84 ~~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~-- 156 (256)
T cd05039 84 KGSLVDYLRSRG--RAVITLAQQLGFALDVCEGMEYLEEKN---FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ-- 156 (256)
T ss_pred CCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccchhcccceEEEeCCCCEEEccccccccccccc--
Confidence 999999996432 236899999999999999999999988 9999999999999999999999999998652211
Q ss_pred ccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccccccchh
Q 002647 659 HISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVI 737 (897)
Q Consensus 659 ~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l 737 (897)
.....+..|+|||++..+.++.++||||||+++|||++ |+.||..... ..+...... . .
T Consensus 157 ---~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~~~~~~~~~-----~---------~ 216 (256)
T cd05039 157 ---DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL---KDVVPHVEK-----G---------Y 216 (256)
T ss_pred ---ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH---HHHHHHHhc-----C---------C
Confidence 12334668999999988889999999999999999997 9999864321 111111110 0 0
Q ss_pred ccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002647 738 ESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKL 776 (897)
Q Consensus 738 ~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~ 776 (897)
....+......+.+++.+||..+|++||++.|+++.|+.
T Consensus 217 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 217 RMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred CCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 001112234568899999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=334.18 Aligned_cols=238 Identities=25% Similarity=0.380 Sum_probs=189.2
Q ss_pred eEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhc-cCCceeeEeeeeecCCceEEEEeeccC
Q 002647 505 RIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRL-HHRNLVKLFGVCIEDNNRCLVYELIHN 579 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~~~~~LV~Ey~~g 579 (897)
++||+|+||+||+|... +++.||||+++... ....+.+..|..++..+ +|+||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999965 57889999997532 23334566777777654 899999999999999999999999999
Q ss_pred CccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcc
Q 002647 580 GSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH 659 (897)
Q Consensus 580 GSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~ 659 (897)
|+|.+++.. ...+++.++..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 g~L~~~~~~----~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~--~ 151 (316)
T cd05592 81 GDLMFHIQS----SGRFDEARARFYAAEIICGLQFLHKKG---IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE--G 151 (316)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC--C
Confidence 999998853 346899999999999999999999987 9999999999999999999999999997543222 2
Q ss_pred cccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhcc
Q 002647 660 ISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIES 739 (897)
Q Consensus 660 ~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~ 739 (897)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. .+. ..+.... +
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~---~~~---~~i~~~~--------~---- 213 (316)
T cd05592 152 KASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED---ELF---DSILNDR--------P---- 213 (316)
T ss_pred ccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH---HHH---HHHHcCC--------C----
Confidence 233467999999999999889999999999999999999999999753321 111 1111000 0
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 002647 740 NISYDTLVKVAAIASMCVQPEVSHRPFMGE 769 (897)
Q Consensus 740 ~~~~e~~~~L~~Li~~CL~~dP~~RPTm~E 769 (897)
.++......+.+++.+||+.||++||++.+
T Consensus 214 ~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~ 243 (316)
T cd05592 214 HFPRWISKEAKDCLSKLFERDPTKRLGVDG 243 (316)
T ss_pred CCCCCCCHHHHHHHHHHccCCHHHcCCChH
Confidence 111122345678999999999999999864
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-36 Score=319.36 Aligned_cols=253 Identities=28% Similarity=0.441 Sum_probs=201.8
Q ss_pred CCceeeeEEeecCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeecc
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIH 578 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~ 578 (897)
++|.+.+.||+|+||.||+|...++..+|+|.+.... ...+.+.+|++++++++|+|++++++++.. +..++||||+.
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEEEEEcCC
Confidence 4688899999999999999998877789999887543 234678999999999999999999998754 56789999999
Q ss_pred CCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCc
Q 002647 579 NGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNK 658 (897)
Q Consensus 579 gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~ 658 (897)
+|+|.++++.. ....+++..++.++.|++.||+|||+.+ |+|+||||+||++++++.+||+|||+++.......
T Consensus 84 ~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~- 157 (260)
T cd05069 84 KGSLLDFLKEG--DGKYLKLPQLVDMAAQIADGMAYIERMN---YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY- 157 (260)
T ss_pred CCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCeEEECCCccceEccCCcc-
Confidence 99999999642 2345899999999999999999999887 99999999999999999999999999975432211
Q ss_pred ccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccccccchh
Q 002647 659 HISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVI 737 (897)
Q Consensus 659 ~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l 737 (897)
.......++..|+|||+..+..++.++||||||+++|||+| |+.||..... .....+... ...
T Consensus 158 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~~~~~~~~------~~~------- 221 (260)
T cd05069 158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVN---REVLEQVER------GYR------- 221 (260)
T ss_pred cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHc------CCC-------
Confidence 11122346678999999988899999999999999999999 8999864321 111111110 000
Q ss_pred ccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002647 738 ESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKL 776 (897)
Q Consensus 738 ~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~ 776 (897)
...+.+....+.+++.+||+.||++||++.+|++.|+.
T Consensus 222 -~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 222 -MPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred -CCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 01122334568899999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=333.67 Aligned_cols=241 Identities=23% Similarity=0.324 Sum_probs=193.3
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCC-ceeeEeeeeecCCceEEEE
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHR-NLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~Hp-NIV~Llg~~~~~~~~~LV~ 574 (897)
+|++.+.||+|+||.||+|... +++.||||+++... ....+.+..|++++..++|+ +|+++++++.+.+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 5788999999999999999965 57889999997532 23445688899999999765 5888999999889999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
||+++|+|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 E~~~~g~L~~~~~~----~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05587 81 EYVNGGDLMYHIQQ----VGKFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGMCKENIF 153 (324)
T ss_pred cCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEEcCCCCEEEeecCcceecCC
Confidence 99999999998853 346899999999999999999999988 99999999999999999999999999874322
Q ss_pred CCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccccccccccc
Q 002647 655 EGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIID 734 (897)
Q Consensus 655 ~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiD 734 (897)
.. .......||..|+|||++.+..++.++|||||||++|||+||+.||..... ....... ....
T Consensus 154 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~---~~~~~~i---~~~~-------- 217 (324)
T cd05587 154 GG--KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE---DELFQSI---MEHN-------- 217 (324)
T ss_pred CC--CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH---HHHHHHH---HcCC--------
Confidence 11 122345799999999999999999999999999999999999999974332 1111111 0000
Q ss_pred chhccCCCHHHHHHHHHHHHHccCCCCCCCCCH
Q 002647 735 PVIESNISYDTLVKVAAIASMCVQPEVSHRPFM 767 (897)
Q Consensus 735 p~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm 767 (897)
..++......+.+++.+||+.||.+|++.
T Consensus 218 ----~~~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 218 ----VSYPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred ----CCCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 01112233467889999999999999986
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=332.78 Aligned_cols=241 Identities=22% Similarity=0.317 Sum_probs=193.7
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhc-cCCceeeEeeeeecCCceEEEE
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRL-HHRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~~~~~LV~ 574 (897)
+|.+.+.||+|+||+||+|... +++.||||+++... ....+.+..|..++..+ +|++|+++++++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 5788999999999999999965 57899999997532 22334567788888877 5899999999999999999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
||+++|+|.+++.. ...+++.+++.++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++....
T Consensus 81 E~~~~g~L~~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~ 153 (323)
T cd05616 81 EYVNGGDLMYQIQQ----VGRFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENMW 153 (323)
T ss_pred cCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEecCCCHHHeEECCCCcEEEccCCCceecCC
Confidence 99999999998853 346899999999999999999999987 99999999999999999999999999875322
Q ss_pred CCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccccccccccc
Q 002647 655 EGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIID 734 (897)
Q Consensus 655 ~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiD 734 (897)
.. .......||+.|+|||++....++.++|||||||++|||+||+.||..... ..+... +...
T Consensus 154 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~---~~~~~~---i~~~--------- 216 (323)
T cd05616 154 DG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE---DELFQS---IMEH--------- 216 (323)
T ss_pred CC--CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH---HHHHHH---HHhC---------
Confidence 11 122346799999999999999999999999999999999999999975332 111111 1100
Q ss_pred chhccCCCHHHHHHHHHHHHHccCCCCCCCCCH
Q 002647 735 PVIESNISYDTLVKVAAIASMCVQPEVSHRPFM 767 (897)
Q Consensus 735 p~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm 767 (897)
. ..++.....++.+++.+|++.||.+|++.
T Consensus 217 -~--~~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 217 -N--VAYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred -C--CCCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 0 01122234567889999999999999985
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-37 Score=335.08 Aligned_cols=238 Identities=25% Similarity=0.360 Sum_probs=192.2
Q ss_pred eEEeecCceEEEEEEe----cCCCEEEEEEeecccc--cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeecc
Q 002647 505 RIIGEGGFGVVYRGIL----DDGREVAVKVLKRANQ--HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIH 578 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l----~~g~~VAVK~lk~~~~--~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~ 578 (897)
+.||+|+||.||++.. .+|+.||+|+++.... .....+.+|+++|++++|+||+++++++..++..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 6799999999999874 3578999999975332 233467789999999999999999999999999999999999
Q ss_pred CCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCc
Q 002647 579 NGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNK 658 (897)
Q Consensus 579 gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~ 658 (897)
+|+|.+++.. ...+++.++..++.||++||+|||+.+ |+||||||+|||+++++.+||+|||+++......
T Consensus 82 ~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-- 152 (318)
T cd05582 82 GGDLFTRLSK----EVMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE-- 152 (318)
T ss_pred CCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHeEECCCCcEEEeeccCCcccCCCC--
Confidence 9999999853 346899999999999999999999988 9999999999999999999999999987643221
Q ss_pred ccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhc
Q 002647 659 HISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIE 738 (897)
Q Consensus 659 ~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~ 738 (897)
.......||..|+|||++....++.++|||||||++|||++|+.||..... ...... +.....
T Consensus 153 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~---~~~~~~---i~~~~~----------- 215 (318)
T cd05582 153 KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR---KETMTM---ILKAKL----------- 215 (318)
T ss_pred CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH---HHHHHH---HHcCCC-----------
Confidence 122346789999999999988899999999999999999999999974321 111111 111000
Q ss_pred cCCCHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 002647 739 SNISYDTLVKVAAIASMCVQPEVSHRPFMGE 769 (897)
Q Consensus 739 ~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~E 769 (897)
.++......+.+++.+||+.||++||++.+
T Consensus 216 -~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 216 -GMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred -CCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 111122345778999999999999999655
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=324.07 Aligned_cols=271 Identities=26% Similarity=0.379 Sum_probs=204.3
Q ss_pred CCceeeeEEeecCceEEEEEEec-----CCCEEEEEEeeccccc-chHHHHHHHHHHhhccCCceeeEeeeeec--CCce
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-----DGREVAVKVLKRANQH-GGREFLAELEMLSRLHHRNLVKLFGVCIE--DNNR 570 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-----~g~~VAVK~lk~~~~~-~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~--~~~~ 570 (897)
..|...+.||+|+||.||+|++. ++..||||+++..... ..++|.+|++++++++|+||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 34667789999999999999854 3678999999865443 45789999999999999999999999877 5578
Q ss_pred EEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcch
Q 002647 571 CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR 650 (897)
Q Consensus 571 ~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr 650 (897)
++||||+++++|.+++... ...+++..++.++.|++.||+|||+.+ |+|+||||+|||++.++.+||+|||++.
T Consensus 84 ~lv~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~ 157 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRH---RDQINLKRLLLFSSQICKGMDYLGSQR---YIHRDLAARNILVESEDLVKISDFGLAK 157 (284)
T ss_pred EEEEecCCCCCHHHHHHhC---ccccCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEccccccc
Confidence 9999999999999999642 235999999999999999999999887 9999999999999999999999999998
Q ss_pred hcccCCCc-ccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccc
Q 002647 651 TALDEGNK-HISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGL 729 (897)
Q Consensus 651 ~~~~~~~~-~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l 729 (897)
........ .......++..|++||++....++.++||||||+++|||+||+.|+..........+.. ... ......+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~-~~~-~~~~~~~ 235 (284)
T cd05038 158 VLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGI-AQG-QMIVTRL 235 (284)
T ss_pred ccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcccccc-ccc-cccHHHH
Confidence 65422221 11112345667999999988899999999999999999999999985432211000000 000 0000000
Q ss_pred cccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 002647 730 KTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLV 777 (897)
Q Consensus 730 ~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l 777 (897)
.+.+........+.....++.+|+.+||+.+|++||++.||+++|+.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 236 LELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 011111111111222336788999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=321.97 Aligned_cols=255 Identities=25% Similarity=0.358 Sum_probs=201.4
Q ss_pred hCCceeeeEEeecCceEEEEEEe-cCCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
.++|++.+.||+|+||.||+|+. .+++.||+|+++.........+.+|+.++++++|+||+++++++..++..++||||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 35688899999999999999996 46889999999765544556788999999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
+++++|.++++. ...+++.++..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 88 ~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06646 88 CGGGSLQDIYHV----TGPLSELQIAYVCRETLQGLAYLHSKG---KMHRDIKGANILLTDNGDVKLADFGVAAKITATI 160 (267)
T ss_pred CCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEECcCccceeecccc
Confidence 999999999853 346899999999999999999999887 9999999999999999999999999998653221
Q ss_pred CcccccccccccccCChhhhh---cCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccc
Q 002647 657 NKHISTHVMGTFGYLAPEYAM---TGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTII 733 (897)
Q Consensus 657 ~~~~~t~~~GT~~Y~APE~l~---~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~ii 733 (897)
. ......|+..|+|||.+. ...++.++|||||||++|||++|+.||........ ...+. ... +.
T Consensus 161 ~--~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~--~~~~~------~~~---~~ 227 (267)
T cd06646 161 A--KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA--LFLMS------KSN---FQ 227 (267)
T ss_pred c--ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh--heeee------cCC---CC
Confidence 1 122346889999999874 34578899999999999999999999853321110 00000 000 00
Q ss_pred cchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002647 734 DPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL 774 (897)
Q Consensus 734 Dp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L 774 (897)
.+.... .......+.+++.+||+.+|++||++.+|++.|
T Consensus 228 ~~~~~~--~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 228 PPKLKD--KTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred CCCCcc--ccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 011110 112235688999999999999999999998653
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-37 Score=327.62 Aligned_cols=258 Identities=28% Similarity=0.457 Sum_probs=202.9
Q ss_pred hCCceeeeEEeecCceEEEEEEec------CCCEEEEEEeeccc-ccchHHHHHHHHHHhhccCCceeeEeeeeecCCce
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILD------DGREVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNR 570 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~------~g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~ 570 (897)
.++|++.+.||+|+||.||+|... ++..||+|++.... ....++|.+|++++++++|+||+++++++..+...
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 467889999999999999999863 46789999987543 23346789999999999999999999999999999
Q ss_pred EEEEeeccCCccccccccCC------------------CCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCc
Q 002647 571 CLVYELIHNGSLESHLHGDD------------------KVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSN 632 (897)
Q Consensus 571 ~LV~Ey~~gGSL~~~L~~~~------------------~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsN 632 (897)
++||||+++|+|.+++.... .....+++.+++.++.|++.||+|||+.+ ++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~---i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK---FVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---eecccccHhh
Confidence 99999999999999986321 11135789999999999999999999887 9999999999
Q ss_pred EEEccCCceEEeccCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCC
Q 002647 633 ILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPG 711 (897)
Q Consensus 633 ILLd~~~~vKLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~ 711 (897)
||+++++.+||+|||+++................+..|+|||++....++.++|||||||++|||++ |..||.....
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~-- 238 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH-- 238 (288)
T ss_pred eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH--
Confidence 9999999999999999875432222112223345678999999998899999999999999999998 8888853321
Q ss_pred chhhHHhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 002647 712 QENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775 (897)
Q Consensus 712 ~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~ 775 (897)
.....+. .. .+ .. ..+.....++.+|+.+||+.+|++||++.|+++.|+
T Consensus 239 -~~~~~~~---~~-~~-~~---------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 239 -EEVIYYV---RD-GN-VL---------SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred -HHHHHHH---hc-CC-CC---------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 1111111 10 00 00 011123456889999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=322.49 Aligned_cols=251 Identities=28% Similarity=0.434 Sum_probs=195.3
Q ss_pred eEEeecCceEEEEEEecC-CC--EEEEEEeeccc-ccchHHHHHHHHHHhhc-cCCceeeEeeeeecCCceEEEEeeccC
Q 002647 505 RIIGEGGFGVVYRGILDD-GR--EVAVKVLKRAN-QHGGREFLAELEMLSRL-HHRNLVKLFGVCIEDNNRCLVYELIHN 579 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~~-g~--~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~~~~~LV~Ey~~g 579 (897)
++||+|+||.||+|.+.+ +. .+|+|.++... ....+.+.+|+++++++ +|+||++++++|...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 368999999999999753 43 46888887533 33446788999999999 899999999999999999999999999
Q ss_pred CccccccccCCC------------CCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccC
Q 002647 580 GSLESHLHGDDK------------VNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFG 647 (897)
Q Consensus 580 GSL~~~L~~~~~------------~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFG 647 (897)
|+|.++++.... ....+++.+++.++.|++.||+|||+.+ ++||||||+|||+++++.+||+|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccccceEEEcCCCeEEECCCC
Confidence 999999864321 1235889999999999999999999887 9999999999999999999999999
Q ss_pred cchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhccccc
Q 002647 648 LARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTK 726 (897)
Q Consensus 648 LAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~ 726 (897)
+++.... .........+..|+|||++....++.++||||||+++|||++ |..||...... .+... ... .
T Consensus 158 l~~~~~~---~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~---~~~~~---~~~-~ 227 (270)
T cd05047 158 LSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA---ELYEK---LPQ-G 227 (270)
T ss_pred Cccccch---hhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH---HHHHH---HhC-C
Confidence 9863211 111112234567999999988889999999999999999997 99998643211 11111 000 0
Q ss_pred ccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 002647 727 EGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVC 778 (897)
Q Consensus 727 e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~ 778 (897)
... .........+.+|+.+||+.||.+||++.|+++.|+.+.
T Consensus 228 ~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 228 YRL----------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CCC----------CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 000 011122346789999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=322.21 Aligned_cols=255 Identities=27% Similarity=0.365 Sum_probs=192.6
Q ss_pred eEEeecCceEEEEEEecC---CCEEEEEEeecccc-cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccCC
Q 002647 505 RIIGEGGFGVVYRGILDD---GREVAVKVLKRANQ-HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNG 580 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~~---g~~VAVK~lk~~~~-~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~gG 580 (897)
+.||+|+||.||+|.+.+ +..+|+|.++.... .....+.+|+.++++++|+||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 368999999999998653 45799998875432 23357889999999999999999999999988999999999999
Q ss_pred ccccccccCCC-CCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcc
Q 002647 581 SLESHLHGDDK-VNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH 659 (897)
Q Consensus 581 SL~~~L~~~~~-~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~ 659 (897)
+|.++|+.... ....+++..+..++.|+++||+|||+.+ ++||||||+||+++.++.+||+|||+++.........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN---FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 99999965322 1235678888999999999999999887 9999999999999999999999999987543222222
Q ss_pred cccccccccccCChhhhhcC-------CCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccc
Q 002647 660 ISTHVMGTFGYLAPEYAMTG-------HLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKT 731 (897)
Q Consensus 660 ~~t~~~GT~~Y~APE~l~~~-------~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~ 731 (897)
......++..|+|||++... .++.++||||||+++|||++ |+.||......+ ...+.. .+....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~---~~~~~~-----~~~~~~ 229 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQ---VLTYTV-----REQQLK 229 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHH---HHHHHh-----hcccCC
Confidence 22335578889999988642 35789999999999999996 999996433211 111100 011111
Q ss_pred cccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 002647 732 IIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775 (897)
Q Consensus 732 iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~ 775 (897)
+.++.+.. .....+.+|+..|+ .+|++||++.||++.|.
T Consensus 230 ~~~~~~~~----~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 230 LPKPRLKL----PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCCccCC----CCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 22222211 12235677999999 58999999999998763
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=358.89 Aligned_cols=260 Identities=23% Similarity=0.299 Sum_probs=211.5
Q ss_pred hhCCceeeeEEeecCceEEEEEEecCC-CEEEEEEeecccccchHHHHHHHHHHhhcc-CCceeeEee-eeecC------
Q 002647 497 ATNGFHTSRIIGEGGFGVVYRGILDDG-REVAVKVLKRANQHGGREFLAELEMLSRLH-HRNLVKLFG-VCIED------ 567 (897)
Q Consensus 497 at~~y~~~~~LG~G~fGtVyka~l~~g-~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~-HpNIV~Llg-~~~~~------ 567 (897)
...++++.++|.+|||+.||.|....+ .++|+|++-..++...+...+||++|++|+ |+|||.+++ .....
T Consensus 35 g~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~ 114 (738)
T KOG1989|consen 35 GSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV 114 (738)
T ss_pred CCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence 345678899999999999999997655 999999998778888889999999999997 999999999 33221
Q ss_pred CceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccC
Q 002647 568 NNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFG 647 (897)
Q Consensus 568 ~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFG 647 (897)
-+.+|.||||.||.|-|++.... ...|++.++++|+.|+++|+++||.. .++|||||||-+||||..++..||||||
T Consensus 115 ~EvllLmEyC~gg~Lvd~mn~Rl--q~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFG 191 (738)
T KOG1989|consen 115 WEVLLLMEYCKGGSLVDFMNTRL--QTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFG 191 (738)
T ss_pred eEEEeehhhccCCcHHHHHHHHH--hccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCccc
Confidence 35689999999999999996533 23499999999999999999999987 5889999999999999999999999999
Q ss_pred cchhcccCCCcc-------cccccccccccCChhhhh---cCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHH
Q 002647 648 LARTALDEGNKH-------ISTHVMGTFGYLAPEYAM---TGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVA 717 (897)
Q Consensus 648 LAr~~~~~~~~~-------~~t~~~GT~~Y~APE~l~---~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~ 717 (897)
.|.......... ..-...-|+.|.|||.+. +..+++|+|||+|||+||-|+....||+...
T Consensus 192 Satt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg--------- 262 (738)
T KOG1989|consen 192 SATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESG--------- 262 (738)
T ss_pred ccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc---------
Confidence 986543322110 011235689999999874 5678999999999999999999999997432
Q ss_pred hhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHh
Q 002647 718 WARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCN 779 (897)
Q Consensus 718 w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~~ 779 (897)
...|++-...-.-.......+..||+.||+.||++||++.+|+..+-.+.+
T Consensus 263 -----------~laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~ 313 (738)
T KOG1989|consen 263 -----------KLAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN 313 (738)
T ss_pred -----------ceeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence 122333332222224566789999999999999999999999999877654
|
|
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=318.90 Aligned_cols=248 Identities=29% Similarity=0.453 Sum_probs=199.2
Q ss_pred CCceeeeEEeecCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeee-cCCceEEEEeec
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCI-EDNNRCLVYELI 577 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~-~~~~~~LV~Ey~ 577 (897)
.+|.+.+.||+|+||.||++... |..||+|.++... ..+.|.+|+.++++++|+|++++++++. +++..++||||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence 46888899999999999999876 7889999986533 3467899999999999999999999865 445789999999
Q ss_pred cCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCC
Q 002647 578 HNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN 657 (897)
Q Consensus 578 ~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~ 657 (897)
++|+|.+++.... ...+++..+++++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++......
T Consensus 83 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~- 156 (256)
T cd05082 83 AKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEANN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ- 156 (256)
T ss_pred CCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccccchheEEEcCCCcEEecCCccceeccccC-
Confidence 9999999986422 235899999999999999999999887 9999999999999999999999999987542211
Q ss_pred cccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccccccch
Q 002647 658 KHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPV 736 (897)
Q Consensus 658 ~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~ 736 (897)
....++..|+|||++....++.++||||||+++|||++ |+.||..... ..+..+... +
T Consensus 157 ----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~---~~~~~~~~~-----~--------- 215 (256)
T cd05082 157 ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL---KDVVPRVEK-----G--------- 215 (256)
T ss_pred ----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHhc-----C---------
Confidence 22345678999999998889999999999999999998 9999863221 122221110 0
Q ss_pred hccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002647 737 IESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKL 776 (897)
Q Consensus 737 l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~ 776 (897)
............+.+++.+|++.+|++||++.++++.|+.
T Consensus 216 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 216 YKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred CCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 0001112334568899999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-36 Score=316.81 Aligned_cols=248 Identities=29% Similarity=0.442 Sum_probs=198.1
Q ss_pred eEEeecCceEEEEEEecCCCEEEEEEeeccccc-chHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccCCccc
Q 002647 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRANQH-GGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLE 583 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~-~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~gGSL~ 583 (897)
++||+|+||.||++...+++.||+|.++..... ....+.+|++++++++|+||+++++++.+....++||||+.+++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 469999999999999877999999998764433 4567999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcccccc
Q 002647 584 SHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTH 663 (897)
Q Consensus 584 ~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~~~t~ 663 (897)
+++... ...+++..++.++.+++.||+|||+.+ ++||||||+|||++.++.+||+|||+++.............
T Consensus 81 ~~l~~~---~~~~~~~~~~~~~~~~~~~l~~lH~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 154 (251)
T cd05041 81 TFLRKK---KNRLTVKKLLQMSLDAAAGMEYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGL 154 (251)
T ss_pred HHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---EehhhcCcceEEEcCCCcEEEeeccccccccCCcceecccc
Confidence 998532 346889999999999999999999887 99999999999999999999999999875432111111112
Q ss_pred cccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccccccchhccCCC
Q 002647 664 VMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESNIS 742 (897)
Q Consensus 664 ~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~ 742 (897)
...+..|+|||.+.++.++.++||||||+++|||+| |..||...... ........ .. ....+
T Consensus 155 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~---~~~~~~~~----~~----------~~~~~ 217 (251)
T cd05041 155 KQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ---QTRERIES----GY----------RMPAP 217 (251)
T ss_pred CcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH---HHHHHHhc----CC----------CCCCC
Confidence 234567999999988899999999999999999999 88888543321 11111100 00 00112
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 002647 743 YDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775 (897)
Q Consensus 743 ~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~ 775 (897)
......+.+|+.+|++.+|++||++.||++.|+
T Consensus 218 ~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 218 QLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred ccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 223457889999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-36 Score=322.27 Aligned_cols=258 Identities=24% Similarity=0.437 Sum_probs=203.9
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCC----EEEEEEeecccc-cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGR----EVAVKVLKRANQ-HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCL 572 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~----~VAVK~lk~~~~-~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~L 572 (897)
.+|++.+.||+|+||+||+|.++ +|. .||+|.+..... ....++.+|+.++++++|+||++++++|.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 56788899999999999999964 333 589998875432 334678899999999999999999999987 78899
Q ss_pred EEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhc
Q 002647 573 VYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTA 652 (897)
Q Consensus 573 V~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~ 652 (897)
||||+++|+|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++..
T Consensus 86 v~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kL~dfg~~~~~ 159 (279)
T cd05057 86 ITQLMPLGCLLDYVRNH---KDNIGSQYLLNWCVQIAKGMSYLEEKR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (279)
T ss_pred EEecCCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhCC---EEecccCcceEEEcCCCeEEECCCcccccc
Confidence 99999999999999642 345899999999999999999999887 999999999999999999999999999865
Q ss_pred ccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccc
Q 002647 653 LDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKT 731 (897)
Q Consensus 653 ~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~ 731 (897)
.............++..|+|||.+....++.++||||||+++|||++ |+.||+.... .++..... . ...
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---~~~~~~~~---~-~~~--- 229 (279)
T cd05057 160 DVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA---VEIPDLLE---K-GER--- 229 (279)
T ss_pred cCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH---HHHHHHHh---C-CCC---
Confidence 43222211122234568999999988889999999999999999999 9999975432 11111111 0 000
Q ss_pred cccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHhh
Q 002647 732 IIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNE 780 (897)
Q Consensus 732 iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~~e 780 (897)
...+......+.+++.+||..+|.+||++.++++.|+.+.++
T Consensus 230 -------~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 230 -------LPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred -------CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 001112234678899999999999999999999999987553
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-36 Score=331.85 Aligned_cols=244 Identities=24% Similarity=0.326 Sum_probs=192.6
Q ss_pred eEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhc-cCCceeeEeeeeecCCceEEEEeeccC
Q 002647 505 RIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRL-HHRNLVKLFGVCIEDNNRCLVYELIHN 579 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~~~~~LV~Ey~~g 579 (897)
++||+|+||+||+|... +++.||||+++... ....+.+.+|+.++.++ +|+||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 47999999999999965 67899999998532 23345688999999988 699999999999999999999999999
Q ss_pred CccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcc
Q 002647 580 GSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH 659 (897)
Q Consensus 580 GSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~ 659 (897)
|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 ~~L~~~~~~----~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~ 151 (327)
T cd05617 81 GDLMFHMQR----QRKLPEEHARFYAAEICIALNFLHERG---IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG--D 151 (327)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEeCCCCEEEeccccceeccCCC--C
Confidence 999988842 346999999999999999999999988 9999999999999999999999999987532211 1
Q ss_pred cccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhcc
Q 002647 660 ISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIES 739 (897)
Q Consensus 660 ~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~ 739 (897)
......||+.|+|||++.+..++.++|||||||+||||++|+.||+........+...+........ . .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~---------~--~ 220 (327)
T cd05617 152 TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEK---------P--I 220 (327)
T ss_pred ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhC---------C--C
Confidence 2234679999999999999999999999999999999999999997543222222211111111100 0 0
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHH
Q 002647 740 NISYDTLVKVAAIASMCVQPEVSHRPFMG 768 (897)
Q Consensus 740 ~~~~e~~~~L~~Li~~CL~~dP~~RPTm~ 768 (897)
.++......+.+++.+||+.||++|+++.
T Consensus 221 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 221 RIPRFLSVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred CCCCCCCHHHHHHHHHHhccCHHHcCCCC
Confidence 11222234577899999999999999854
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-36 Score=323.18 Aligned_cols=266 Identities=26% Similarity=0.377 Sum_probs=205.7
Q ss_pred eecHHHHHHhhCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccccchHHHHHHHHHHhhc-cCCceeeEeeeee
Q 002647 488 TFTLNDIEKATNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLAELEMLSRL-HHRNLVKLFGVCI 565 (897)
Q Consensus 488 ~f~~~ei~~at~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~ 565 (897)
.+.++.+..+.++|++.+.||+|+||.||+|... +++.+|+|+++... ....++.+|+.+++++ +|+||+++++++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 85 (286)
T cd06638 7 TIIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYY 85 (286)
T ss_pred eEEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeee
Confidence 3455667778899999999999999999999964 57899999886532 2236788999999999 6999999999884
Q ss_pred -----cCCceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCc
Q 002647 566 -----EDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFT 640 (897)
Q Consensus 566 -----~~~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~ 640 (897)
.++..++||||+++|+|.++++........+++..+..++.|+++||.|||+.+ |+||||||+||++++++.
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~ 162 (286)
T cd06638 86 KKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK---TIHRDVKGNNILLTTEGG 162 (286)
T ss_pred ecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC---ccccCCCHHhEEECCCCC
Confidence 335679999999999999988643333457899999999999999999999887 999999999999999999
Q ss_pred eEEeccCcchhcccCCCcccccccccccccCChhhhhc-----CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhh
Q 002647 641 PKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMT-----GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENL 715 (897)
Q Consensus 641 vKLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~-----~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~l 715 (897)
+||+|||+++...... .......|+..|+|||++.. ..++.++|||||||++|||++|+.||...... ..+
T Consensus 163 ~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~--~~~ 238 (286)
T cd06638 163 VKLVDFGVSAQLTSTR--LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM--RAL 238 (286)
T ss_pred EEEccCCceeecccCC--CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh--HHH
Confidence 9999999987643221 12233468999999998753 45788999999999999999999998643221 111
Q ss_pred HHhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002647 716 VAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL 774 (897)
Q Consensus 716 v~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L 774 (897)
..+. ......+.+ +......+.+|+.+||+.||++||++.||++.+
T Consensus 239 ~~~~------~~~~~~~~~-------~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 239 FKIP------RNPPPTLHQ-------PELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred hhcc------ccCCCcccC-------CCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 1100 000001111 111224578899999999999999999998753
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-36 Score=331.42 Aligned_cols=238 Identities=26% Similarity=0.378 Sum_probs=191.3
Q ss_pred eEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhc-cCCceeeEeeeeecCCceEEEEeeccC
Q 002647 505 RIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRL-HHRNLVKLFGVCIEDNNRCLVYELIHN 579 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~~~~~LV~Ey~~g 579 (897)
++||+|+||+||+|..+ +++.||||+++... ....+.+..|.+++..+ +|+||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 47999999999999965 68899999997532 23445678899999876 699999999999999999999999999
Q ss_pred CccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcc
Q 002647 580 GSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH 659 (897)
Q Consensus 580 GSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~ 659 (897)
|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 g~L~~~i~~----~~~l~~~~~~~~~~ql~~~L~~lH~~~---ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~--~ 151 (320)
T cd05590 81 GDLMFHIQK----SRRFDEARARFYAAEITSALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG--K 151 (320)
T ss_pred chHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC--C
Confidence 999998853 346899999999999999999999988 9999999999999999999999999987532211 2
Q ss_pred cccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhcc
Q 002647 660 ISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIES 739 (897)
Q Consensus 660 ~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~ 739 (897)
......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..+.. .+.... .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~---~~~~~---~i~~~~-----~------- 213 (320)
T cd05590 152 TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE---DDLFE---AILNDE-----V------- 213 (320)
T ss_pred cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH---HHHHH---HHhcCC-----C-------
Confidence 23346799999999999988999999999999999999999999975332 11111 111100 0
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 002647 740 NISYDTLVKVAAIASMCVQPEVSHRPFMGE 769 (897)
Q Consensus 740 ~~~~e~~~~L~~Li~~CL~~dP~~RPTm~E 769 (897)
..+......+.+++.+||+.||++|+++.+
T Consensus 214 ~~~~~~~~~~~~li~~~L~~dP~~R~~~~~ 243 (320)
T cd05590 214 VYPTWLSQDAVDILKAFMTKNPTMRLGSLT 243 (320)
T ss_pred CCCCCCCHHHHHHHHHHcccCHHHCCCCCC
Confidence 011112346788999999999999999843
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-36 Score=324.19 Aligned_cols=261 Identities=27% Similarity=0.427 Sum_probs=201.5
Q ss_pred CceeeeEEeecCceEEEEEEe-----cCCCEEEEEEeeccc-ccchHHHHHHHHHHhhccCCceeeEeeeeecC--CceE
Q 002647 500 GFHTSRIIGEGGFGVVYRGIL-----DDGREVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKLFGVCIED--NNRC 571 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l-----~~g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~--~~~~ 571 (897)
.|.+.+.||+|+||.||++.. .++..||+|.++... ......+.+|++++++++|+|++++.+++... ...+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 467889999999999999984 357889999987543 33346799999999999999999999998875 5678
Q ss_pred EEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchh
Q 002647 572 LVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLART 651 (897)
Q Consensus 572 LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~ 651 (897)
+||||+++++|.+++... ...+++.+++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 85 lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~i~~~i~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRN---KNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKA 158 (284)
T ss_pred EEEEccCCCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccchheEEEcCCCCEEECCCccccc
Confidence 999999999999998532 235899999999999999999999988 99999999999999999999999999986
Q ss_pred cccCCCc-ccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCC---------CchhhHHhhhh
Q 002647 652 ALDEGNK-HISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPP---------GQENLVAWARP 721 (897)
Q Consensus 652 ~~~~~~~-~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~---------~~~~lv~w~~~ 721 (897)
....... .......++..|+|||++.+..++.++||||||+++|||+|++.|....... .......+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd05079 159 IETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRV 238 (284)
T ss_pred cccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHH
Confidence 5432221 1222355677899999998888999999999999999999988765321100 00000000000
Q ss_pred cccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 002647 722 LLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLV 777 (897)
Q Consensus 722 l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l 777 (897)
. ...............+.+|+.+||+.+|++||++.||++.|+.+
T Consensus 239 -~----------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 239 -L----------EEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred -H----------HcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 0 00000111223446788999999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-36 Score=316.87 Aligned_cols=251 Identities=29% Similarity=0.532 Sum_probs=201.4
Q ss_pred CCceeeeEEeecCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeecc
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIH 578 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~ 578 (897)
.+|++.+.||+|+||.||+|.+.++..+|+|.++... ....+|.+|++++++++|+|++++++++......++||||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 4678889999999999999998778899999987543 234679999999999999999999999999899999999999
Q ss_pred CCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCc
Q 002647 579 NGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNK 658 (897)
Q Consensus 579 gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~ 658 (897)
+++|.+++... ...+++..++.++.|++.||+|||+.+ ++|+||||+||+++.++.+||+|||+++.......
T Consensus 83 ~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~- 155 (256)
T cd05112 83 HGCLSDYLRAQ---RGKFSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY- 155 (256)
T ss_pred CCcHHHHHHhC---ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccccceEEEcCCCeEEECCCcceeecccCcc-
Confidence 99999998532 346899999999999999999999887 99999999999999999999999999875432211
Q ss_pred ccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccccccchh
Q 002647 659 HISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVI 737 (897)
Q Consensus 659 ~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l 737 (897)
.......++.+|+|||++.++.++.++||||||+++|||++ |+.||+.... ..+... +.. .. ....+.
T Consensus 156 ~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~---~~~~~~---~~~---~~-~~~~~~- 224 (256)
T cd05112 156 TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN---SEVVET---INA---GF-RLYKPR- 224 (256)
T ss_pred cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH---HHHHHH---HhC---CC-CCCCCC-
Confidence 11112234678999999998889999999999999999998 9999864221 111111 100 00 011111
Q ss_pred ccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002647 738 ESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL 774 (897)
Q Consensus 738 ~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L 774 (897)
.....+.+|+.+||+.+|++||++.||++.|
T Consensus 225 ------~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 225 ------LASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred ------CCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 1235688999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=319.17 Aligned_cols=249 Identities=30% Similarity=0.447 Sum_probs=198.7
Q ss_pred eEEeecCceEEEEEEecC--C--CEEEEEEeecccc-cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccC
Q 002647 505 RIIGEGGFGVVYRGILDD--G--REVAVKVLKRANQ-HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHN 579 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~~--g--~~VAVK~lk~~~~-~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~g 579 (897)
++||+|++|.||+|.+.+ + ..||||.+..... ...++|.+|++++++++|+||+++++++.. ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999999643 3 3699999986555 556789999999999999999999999988 888999999999
Q ss_pred CccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCc-
Q 002647 580 GSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNK- 658 (897)
Q Consensus 580 GSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~- 658 (897)
|+|.+++..... ..+++..++.++.|+++||+|||+.+ ++|+||||+||+++.++.+||+|||+++........
T Consensus 80 ~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 154 (257)
T cd05040 80 GSLLDRLRKDAL--GHFLISTLCDYAVQIANGMRYLESKR---FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHY 154 (257)
T ss_pred CcHHHHHHhccc--ccCcHHHHHHHHHHHHHHHHHHHhCC---ccccccCcccEEEecCCEEEeccccccccccccccce
Confidence 999999965322 46899999999999999999999887 999999999999999999999999999865432221
Q ss_pred ccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccccccchh
Q 002647 659 HISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVI 737 (897)
Q Consensus 659 ~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l 737 (897)
.......++..|+|||++....++.++||||||+++|||++ |+.||+..... +...... ..... .
T Consensus 155 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~~~~~~---~~~~~---~----- 220 (257)
T cd05040 155 VMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS---QILKKID---KEGER---L----- 220 (257)
T ss_pred ecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHH---hcCCc---C-----
Confidence 11223457789999999998899999999999999999999 99998643221 1111110 00000 0
Q ss_pred ccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 002647 738 ESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775 (897)
Q Consensus 738 ~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~ 775 (897)
..+......+.+++.+|++.+|++||++.||++.|.
T Consensus 221 --~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 221 --ERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred --CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 011123356889999999999999999999998774
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=318.54 Aligned_cols=250 Identities=32% Similarity=0.522 Sum_probs=199.6
Q ss_pred ceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccccchH--HHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeec
Q 002647 501 FHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGR--EFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELI 577 (897)
Q Consensus 501 y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~~~~--~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~ 577 (897)
|++.+.||+|+||+||+++.. +++.+|+|++......... ...+|+.++++++|+||+++++++......++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 678899999999999999976 5668999999865443322 3456999999999999999999999999999999999
Q ss_pred cCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCC
Q 002647 578 HNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN 657 (897)
Q Consensus 578 ~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~ 657 (897)
.+++|.++|. ....+++.+++.++.|+++||+|||+.+ |+|+||||+|||+++++.++|+|||.+... ...
T Consensus 81 ~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~L~~Lh~~~---i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~--~~~ 151 (260)
T PF00069_consen 81 PGGSLQDYLQ----KNKPLSEEEILKIAYQILEALAYLHSKG---IVHRDIKPENILLDENGEVKLIDFGSSVKL--SEN 151 (260)
T ss_dssp TTEBHHHHHH----HHSSBBHHHHHHHHHHHHHHHHHHHHTT---EEESSBSGGGEEESTTSEEEESSGTTTEES--TST
T ss_pred cccccccccc----cccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccc--ccc
Confidence 9999999995 2456899999999999999999999988 999999999999999999999999998753 122
Q ss_pred cccccccccccccCChhhhh-cCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccch
Q 002647 658 KHISTHVMGTFGYLAPEYAM-TGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPV 736 (897)
Q Consensus 658 ~~~~t~~~GT~~Y~APE~l~-~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~ 736 (897)
........++..|+|||++. ....+.++||||||+++|+|++|+.||............. ......
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~-------------~~~~~~ 218 (260)
T PF00069_consen 152 NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIE-------------KILKRP 218 (260)
T ss_dssp TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHH-------------HHHHTH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhh-------------hccccc
Confidence 23344567899999999998 7888999999999999999999999997431101111100 000000
Q ss_pred hccCC--CHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 737 IESNI--SYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 737 l~~~~--~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
+.... .......+.+++..||+.||++||++.|+++
T Consensus 219 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 219 LPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred ccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00000 0111268899999999999999999999875
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-36 Score=320.65 Aligned_cols=256 Identities=27% Similarity=0.437 Sum_probs=202.8
Q ss_pred CCceeeeEEeecCceEEEEEEec-C---CCEEEEEEeeccc-ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-D---GREVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLV 573 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~---g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV 573 (897)
.+|++.+.||+|+||.||+|.+. + +..+|+|.++... ....+.|.+|+.++++++|+||+++++++..++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 56888999999999999999864 2 3369999987532 22346789999999999999999999999999999999
Q ss_pred EeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcc
Q 002647 574 YELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTAL 653 (897)
Q Consensus 574 ~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~ 653 (897)
|||+++|+|.+++... ...+++.+++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 84 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd05066 84 TEYMENGSLDAFLRKH---DGQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVLE 157 (267)
T ss_pred EEcCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeehhhchhcEEECCCCeEEeCCCCcccccc
Confidence 9999999999999632 346899999999999999999999887 9999999999999999999999999998654
Q ss_pred cCCCcc-cccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccc
Q 002647 654 DEGNKH-ISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKT 731 (897)
Q Consensus 654 ~~~~~~-~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~ 731 (897)
...... ......++..|+|||++.+..++.++||||||+++||+++ |+.||..... .....+.... ..
T Consensus 158 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~---~~~~~~~~~~----~~--- 227 (267)
T cd05066 158 DDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN---QDVIKAIEEG----YR--- 227 (267)
T ss_pred cccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCH---HHHHHHHhCC----Cc---
Confidence 322211 1112233568999999998899999999999999999887 9999864322 1122211110 00
Q ss_pred cccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 002647 732 IIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLV 777 (897)
Q Consensus 732 iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l 777 (897)
..........+.+++.+|++.+|.+||+|.++++.|+.+
T Consensus 228 -------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 228 -------LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred -------CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 001122345678999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=334.33 Aligned_cols=238 Identities=26% Similarity=0.357 Sum_probs=188.8
Q ss_pred eEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHH-HHhhccCCceeeEeeeeecCCceEEEEeeccC
Q 002647 505 RIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELE-MLSRLHHRNLVKLFGVCIEDNNRCLVYELIHN 579 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~-iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~g 579 (897)
++||+|+||+||+|... +|+.||||++.... ....+++.+|.. +++.++|+||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 47999999999999965 68999999997532 222344555555 56789999999999999999999999999999
Q ss_pred CccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcc
Q 002647 580 GSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH 659 (897)
Q Consensus 580 GSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~ 659 (897)
|+|.+++.. ...+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++..... ..
T Consensus 81 g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~g---ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~--~~ 151 (323)
T cd05575 81 GELFFHLQR----ERSFPEPRARFYAAEIASALGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH--SK 151 (323)
T ss_pred CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeccCCCcccccC--CC
Confidence 999998853 346899999999999999999999988 999999999999999999999999998753221 12
Q ss_pred cccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhcc
Q 002647 660 ISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIES 739 (897)
Q Consensus 660 ~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~ 739 (897)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...+. ..+ ......... .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~---~~~---~~~i~~~~~--------~--- 214 (323)
T cd05575 152 TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT---AEM---YDNILNKPL--------R--- 214 (323)
T ss_pred ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH---HHH---HHHHHcCCC--------C---
Confidence 23456799999999999999999999999999999999999999964321 111 111111000 0
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 002647 740 NISYDTLVKVAAIASMCVQPEVSHRPFMGE 769 (897)
Q Consensus 740 ~~~~e~~~~L~~Li~~CL~~dP~~RPTm~E 769 (897)
........+.+++.+||+.||.+||++++
T Consensus 215 -~~~~~~~~~~~li~~~l~~~p~~R~~~~~ 243 (323)
T cd05575 215 -LKPNISVSARHLLEGLLQKDRTKRLGAKD 243 (323)
T ss_pred -CCCCCCHHHHHHHHHHhhcCHHhCCCCCC
Confidence 11122356788999999999999999863
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-36 Score=332.52 Aligned_cols=261 Identities=27% Similarity=0.402 Sum_probs=204.3
Q ss_pred CCceeeeEEeecCceEEEEEEec--------CCCEEEEEEeeccc-ccchHHHHHHHHHHhhc-cCCceeeEeeeeecCC
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD--------DGREVAVKVLKRAN-QHGGREFLAELEMLSRL-HHRNLVKLFGVCIEDN 568 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~--------~g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~~ 568 (897)
.+|.+.+.||+|+||.||+|... ++..||+|.++... ....+++.+|+++++++ +|+||++++++|..++
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 46888999999999999999742 12368999887532 23346799999999999 8999999999999999
Q ss_pred ceEEEEeeccCCccccccccCC------------CCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEc
Q 002647 569 NRCLVYELIHNGSLESHLHGDD------------KVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLE 636 (897)
Q Consensus 569 ~~~LV~Ey~~gGSL~~~L~~~~------------~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd 636 (897)
..++||||+++|+|.++|.... .....+++.+++.++.|++.||+|||+.+ |+||||||+|||++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nill~ 168 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK---CIHRDLAARNVLVT 168 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEc
Confidence 9999999999999999986421 12345899999999999999999999987 99999999999999
Q ss_pred cCCceEEeccCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhh
Q 002647 637 HDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENL 715 (897)
Q Consensus 637 ~~~~vKLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~l 715 (897)
+++.+||+|||+++...............++..|+|||++....++.++||||||+++|||++ |..||.....
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------ 242 (334)
T cd05100 169 EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV------ 242 (334)
T ss_pred CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH------
Confidence 999999999999976533221112222334568999999999999999999999999999998 8888864321
Q ss_pred HHhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHh
Q 002647 716 VAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCN 779 (897)
Q Consensus 716 v~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~~ 779 (897)
..+...+.. .. ....+......+.+++.+||+.+|++||++.|+++.|+.+..
T Consensus 243 ~~~~~~~~~-~~----------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~ 295 (334)
T cd05100 243 EELFKLLKE-GH----------RMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT 295 (334)
T ss_pred HHHHHHHHc-CC----------CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence 111111110 00 001122334568899999999999999999999999987753
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-36 Score=319.24 Aligned_cols=257 Identities=24% Similarity=0.393 Sum_probs=202.4
Q ss_pred HHHHhhCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceE
Q 002647 493 DIEKATNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRC 571 (897)
Q Consensus 493 ei~~at~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~ 571 (897)
|++.+++++....+||+|+||.||+|... ++..||+|.+........+.+.+|++++++++|+||+++++++..++..+
T Consensus 2 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (268)
T cd06624 2 EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFK 81 (268)
T ss_pred CcccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEE
Confidence 34556777777789999999999999954 67889999987665556678999999999999999999999999999999
Q ss_pred EEEeeccCCccccccccCCCCCCCC--CHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEcc-CCceEEeccCc
Q 002647 572 LVYELIHNGSLESHLHGDDKVNGPL--DWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEH-DFTPKVSDFGL 648 (897)
Q Consensus 572 LV~Ey~~gGSL~~~L~~~~~~~~~L--s~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~-~~~vKLsDFGL 648 (897)
+|+||+++++|.+++... ...+ ++..+..++.||+.||+|||+.+ |+||||||+||+++. ++.+||+|||+
T Consensus 82 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~h~dl~p~nil~~~~~~~~~l~dfg~ 155 (268)
T cd06624 82 IFMEQVPGGSLSALLRSK---WGPLKDNEQTIIFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLVNTYSGVVKISDFGT 155 (268)
T ss_pred EEEecCCCCCHHHHHHHh---cccCCCcHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCeEEEecchh
Confidence 999999999999999642 1334 78889999999999999999887 999999999999986 67999999999
Q ss_pred chhcccCCCcccccccccccccCChhhhhcCC--CCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccc
Q 002647 649 ARTALDEGNKHISTHVMGTFGYLAPEYAMTGH--LLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTK 726 (897)
Q Consensus 649 Ar~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~--~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~ 726 (897)
+....... .......|+..|+|||++.... ++.++||||||+++|||++|+.||...... ....|.......
T Consensus 156 ~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~---~~~~~~~~~~~~- 229 (268)
T cd06624 156 SKRLAGIN--PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEP---QAAMFKVGMFKI- 229 (268)
T ss_pred heecccCC--CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccCh---hhhHhhhhhhcc-
Confidence 87543211 1222345789999999986643 788999999999999999999998643211 111111110000
Q ss_pred ccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 727 EGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 727 e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
...++.....++.+++.+||+.+|++||++.|+++
T Consensus 230 -----------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 230 -----------HPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred -----------CCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 01122233456788999999999999999999875
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-36 Score=326.72 Aligned_cols=265 Identities=25% Similarity=0.400 Sum_probs=201.5
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc-ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
++|++.+.||+|+||.||++... ++..+|+|.++... .....++.+|++++++++|+||++++++|.+++..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 46889999999999999999965 67889999887532 22345688999999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhcc-CCCcEEecCCCCCcEEEccCCceEEeccCcchhcccC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHED-SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~-gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~ 655 (897)
+++++|.+++.. ...+++..+..++.|+++||.|||+. + |+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (308)
T cd06615 81 MDGGSLDQVLKK----AGRIPENILGKISIAVLRGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 153 (308)
T ss_pred cCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhhCC---EEECCCChHHEEEecCCcEEEccCCCccccccc
Confidence 999999999953 35689999999999999999999973 5 999999999999999999999999998754322
Q ss_pred CCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccccc-------
Q 002647 656 GNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEG------- 728 (897)
Q Consensus 656 ~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~------- 728 (897)
......|+..|+|||++.+..++.++||||||+++|||++|+.||...+....................
T Consensus 154 ----~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (308)
T cd06615 154 ----MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGH 229 (308)
T ss_pred ----ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCC
Confidence 123456889999999998888999999999999999999999998643321111111000000000000
Q ss_pred ---------ccccccchhc---cCCC-HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002647 729 ---------LKTIIDPVIE---SNIS-YDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL 774 (897)
Q Consensus 729 ---------l~~iiDp~l~---~~~~-~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L 774 (897)
..++.+.... ...+ ......+.+++.+||+.+|++||++.||++..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 230 PPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred CCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 0000000000 0000 01234588999999999999999999998764
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-36 Score=317.66 Aligned_cols=248 Identities=31% Similarity=0.452 Sum_probs=196.4
Q ss_pred eEEeecCceEEEEEEec--C--CCEEEEEEeecccc-cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccC
Q 002647 505 RIIGEGGFGVVYRGILD--D--GREVAVKVLKRANQ-HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHN 579 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~--~--g~~VAVK~lk~~~~-~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~g 579 (897)
++||+|+||.||+|++. + +..+|+|.+..... ...+++.+|++++++++|+||+++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 46999999999999853 2 26899999875443 24467999999999999999999999876 4568999999999
Q ss_pred CccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcc
Q 002647 580 GSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH 659 (897)
Q Consensus 580 GSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~ 659 (897)
|+|.++|.. ...+++..++.++.|++.||+|||..+ ++|+||||+|||++.++.+||+|||+++.........
T Consensus 80 ~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~ 152 (257)
T cd05060 80 GPLLKYLKK----RREIPVSDLKELAHQVAMGMAYLESKH---FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYY 152 (257)
T ss_pred CcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHhhcC---eeccCcccceEEEcCCCcEEeccccccceeecCCccc
Confidence 999999963 236899999999999999999999887 9999999999999999999999999998654322211
Q ss_pred -cccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccccccchh
Q 002647 660 -ISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVI 737 (897)
Q Consensus 660 -~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l 737 (897)
......++..|+|||.+....++.++||||||+++|||++ |+.||+.... ..+..+.... ...
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~---~~~~~~~~~~----~~~-------- 217 (257)
T cd05060 153 RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG---AEVIAMLESG----ERL-------- 217 (257)
T ss_pred ccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH---HHHHHHHHcC----CcC--------
Confidence 1112234568999999998899999999999999999998 9999965432 2222222111 000
Q ss_pred ccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 002647 738 ESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLV 777 (897)
Q Consensus 738 ~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l 777 (897)
..+......+.+|+.+||+.+|++||++.+|++.|+.+
T Consensus 218 --~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 218 --PRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred --CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 01122335678999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-36 Score=347.12 Aligned_cols=241 Identities=25% Similarity=0.395 Sum_probs=203.8
Q ss_pred hhCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhc-cCCceeeEeeeeecCCceE
Q 002647 497 ATNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRL-HHRNLVKLFGVCIEDNNRC 571 (897)
Q Consensus 497 at~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~~~~~ 571 (897)
..++|...++||+|.||+|+++..+ +++.+|||++++.. ..+.+..+.|..++... +||.+++|+..|...+..|
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 4568999999999999999999976 57889999998754 34456788898888877 5999999999999999999
Q ss_pred EEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchh
Q 002647 572 LVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLART 651 (897)
Q Consensus 572 LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~ 651 (897)
+||||+.||++..+.+ .+.+++..+.-++..|+.||+|||+++ ||+||||.+|||||.+|.+||+|||+++.
T Consensus 446 fvmey~~Ggdm~~~~~-----~~~F~e~rarfyaAev~l~L~fLH~~~---IIYRDlKLdNiLLD~eGh~kiADFGlcKe 517 (694)
T KOG0694|consen 446 FVMEYVAGGDLMHHIH-----TDVFSEPRARFYAAEVVLGLQFLHENG---IIYRDLKLDNLLLDTEGHVKIADFGLCKE 517 (694)
T ss_pred EEEEecCCCcEEEEEe-----cccccHHHHHHHHHHHHHHHHHHHhcC---ceeeecchhheEEcccCcEEecccccccc
Confidence 9999999999666554 356999999999999999999999998 99999999999999999999999999996
Q ss_pred cccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccc
Q 002647 652 ALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKT 731 (897)
Q Consensus 652 ~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~ 731 (897)
....+ ..+.+++||+.|||||++.+..|+...|-|+|||+|||||.|..||.+.+.++
T Consensus 518 ~m~~g--~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee-------------------- 575 (694)
T KOG0694|consen 518 GMGQG--DRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEE-------------------- 575 (694)
T ss_pred cCCCC--CccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHH--------------------
Confidence 54322 35567999999999999999999999999999999999999999997544321
Q ss_pred cccchhcc--CCCHHHHHHHHHHHHHccCCCCCCCCCH
Q 002647 732 IIDPVIES--NISYDTLVKVAAIASMCVQPEVSHRPFM 767 (897)
Q Consensus 732 iiDp~l~~--~~~~e~~~~L~~Li~~CL~~dP~~RPTm 767 (897)
++|..+.. .++.-...+.+.|+++.+..||++|--+
T Consensus 576 ~FdsI~~d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 576 VFDSIVNDEVRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred HHHHHhcCCCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 22222211 2344455677889999999999999876
|
|
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-36 Score=341.83 Aligned_cols=260 Identities=22% Similarity=0.282 Sum_probs=196.5
Q ss_pred hCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
.++|.+.+.||+|+||.||++... +++.||+|.... ..+.+|+++|++|+|+||+++++++......++|+|+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 468999999999999999999964 688999997542 4578999999999999999999999998999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
+. ++|.+++.. ...+++.+++.|+.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 165 ~~-~~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~ylH~~~---IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~ 236 (391)
T PHA03212 165 YK-TDLYCYLAA----KRNIAICDILAIERSVLRAIQYLHENR---IIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN 236 (391)
T ss_pred CC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHhEEEcCCCCEEEEeCCccccccccc
Confidence 95 688888743 346899999999999999999999987 9999999999999999999999999997532211
Q ss_pred CcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCc-----hhhHHhhhhcc--------
Q 002647 657 NKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQ-----ENLVAWARPLL-------- 723 (897)
Q Consensus 657 ~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~-----~~lv~w~~~l~-------- 723 (897)
........||+.|+|||++.+..++.++|||||||+||||+||+.||........ ..+.......-
T Consensus 237 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~ 315 (391)
T PHA03212 237 -ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPI 315 (391)
T ss_pred -ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCc
Confidence 1222346799999999999998999999999999999999999988743321110 00000000000
Q ss_pred cccccccccc-------cchhccCC----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 724 TTKEGLKTII-------DPVIESNI----SYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 724 ~~~e~l~~ii-------Dp~l~~~~----~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
.....+..+. ........ ..+....+.+|+.+||+.||++|||+.|+++
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 316 DAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred chhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000000000 00000000 0122346889999999999999999999975
|
|
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-36 Score=325.45 Aligned_cols=251 Identities=24% Similarity=0.368 Sum_probs=203.9
Q ss_pred hCCceeeeEEeecCceEEEEEEe-cCCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
..+|.+.+.||+|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++|+||+++++.+..+...++||||
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~ 98 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence 35788899999999999999995 46899999999876555567899999999999999999999999998999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
+++++|.+++.. ..+++.+++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 99 ~~~~~L~~~~~~-----~~~~~~~~~~i~~ql~~aL~~LH~~g---i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~ 170 (296)
T cd06654 99 LAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170 (296)
T ss_pred cCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEECccccchhccccc
Confidence 999999999852 35899999999999999999999888 9999999999999999999999999987543221
Q ss_pred CcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccch
Q 002647 657 NKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPV 736 (897)
Q Consensus 657 ~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~ 736 (897)
.......|+..|+|||++.+..++.++|||||||++|||++|+.||...... ..+..+.. .....+
T Consensus 171 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~--~~~~~~~~------~~~~~~---- 236 (296)
T cd06654 171 --SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL--RALYLIAT------NGTPEL---- 236 (296)
T ss_pred --cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH--HhHHHHhc------CCCCCC----
Confidence 1123356889999999999888899999999999999999999999643321 11111100 000000
Q ss_pred hccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 737 IESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 737 l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
..+......+.+++.+||..+|++||++.||++.
T Consensus 237 ---~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 237 ---QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred ---CCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 0112233557889999999999999999999873
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-36 Score=322.46 Aligned_cols=250 Identities=25% Similarity=0.389 Sum_probs=197.3
Q ss_pred CCceeeeEEeecCceEEEEEEe-cCCCEEEEEEeeccc-ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 499 NGFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
++|+..++||+|+||.||+|.. .+++.||+|.+.... ....+++.+|++++++++|+||+++++++...+..++||||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 3577889999999999999995 468899999986532 23345789999999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
+++|+|..+. .+++..+..++.|++.||+|||+.+ |+|+||||+|||++.++.+||+|||++......
T Consensus 81 ~~~~~l~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~- 148 (279)
T cd06619 81 MDGGSLDVYR--------KIPEHVLGRIAVAVVKGLTYLWSLK---ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS- 148 (279)
T ss_pred CCCCChHHhh--------cCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCCHHHEEECCCCCEEEeeCCcceecccc-
Confidence 9999986543 3678889999999999999999988 999999999999999999999999998754322
Q ss_pred CcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCch-hhHHhhhhcccccccccccccc
Q 002647 657 NKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQE-NLVAWARPLLTTKEGLKTIIDP 735 (897)
Q Consensus 657 ~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~-~lv~w~~~l~~~~e~l~~iiDp 735 (897)
......|+..|+|||++.+..++.++||||||+++|||++|+.||......... ....+....... ..+
T Consensus 149 ---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-------~~~ 218 (279)
T cd06619 149 ---IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDE-------DPP 218 (279)
T ss_pred ---cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhcc-------CCC
Confidence 223457899999999999889999999999999999999999999643321111 001111100000 000
Q ss_pred hhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 736 VIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 736 ~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
.+. .......+.+++.+|++.+|++||++.|+++.
T Consensus 219 ~~~---~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 219 VLP---VGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred CCC---CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 110 11123457899999999999999999999765
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=334.23 Aligned_cols=243 Identities=26% Similarity=0.346 Sum_probs=190.9
Q ss_pred eEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHH-HHhhccCCceeeEeeeeecCCceEEEEeeccC
Q 002647 505 RIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELE-MLSRLHHRNLVKLFGVCIEDNNRCLVYELIHN 579 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~-iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~g 579 (897)
++||+|+||+||+|... +|+.||||++.... ......+.+|.. +++.++|+||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46999999999999954 68999999997532 223345566655 46779999999999999999999999999999
Q ss_pred CccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcc
Q 002647 580 GSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH 659 (897)
Q Consensus 580 GSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~ 659 (897)
|+|.+++.. ...+++.++..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++..... ..
T Consensus 81 ~~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~g---ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~--~~ 151 (325)
T cd05604 81 GELFFHLQR----ERSFPEPRARFYAAEIASALGYLHSIN---IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ--SD 151 (325)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEeecCCcccCCCC--CC
Confidence 999988843 356899999999999999999999988 999999999999999999999999998753221 12
Q ss_pred cccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhcc
Q 002647 660 ISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIES 739 (897)
Q Consensus 660 ~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~ 739 (897)
......||..|+|||++.+..++.++|||||||++|||++|+.||...... .+. +..... .+
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~---~~~---~~~~~~----------~~-- 213 (325)
T cd05604 152 TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA---EMY---DNILHK----------PL-- 213 (325)
T ss_pred CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH---HHH---HHHHcC----------Cc--
Confidence 234567999999999999999999999999999999999999999643211 111 111110 00
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002647 740 NISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL 774 (897)
Q Consensus 740 ~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L 774 (897)
.........+.+++.+|++.+|.+||++++.++.+
T Consensus 214 ~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i 248 (325)
T cd05604 214 VLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEI 248 (325)
T ss_pred cCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHH
Confidence 00112234567899999999999999987544433
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=320.39 Aligned_cols=251 Identities=29% Similarity=0.505 Sum_probs=197.3
Q ss_pred eEEeecCceEEEEEEecC-------CCEEEEEEeeccc-ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 505 RIIGEGGFGVVYRGILDD-------GREVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~~-------g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
+.||+|+||.||+|+..+ +..+|||.+.... .....++.+|++++++++|+||++++++|...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 369999999999999643 2579999886533 23456789999999999999999999999998899999999
Q ss_pred ccCCccccccccCCC---CCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCC-----ceEEeccCc
Q 002647 577 IHNGSLESHLHGDDK---VNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDF-----TPKVSDFGL 648 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~---~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~-----~vKLsDFGL 648 (897)
+++|+|.+++..... ....+++.+++.++.|++.||+|||+.+ ++|+||||+|||++.++ .+||+|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH---FIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC---cccCCCChheEEEecCCCCCCcceEECCccc
Confidence 999999999964321 2245889999999999999999999887 99999999999999877 899999999
Q ss_pred chhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccc
Q 002647 649 ARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKE 727 (897)
Q Consensus 649 Ar~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e 727 (897)
++...............++..|+|||++.++.++.++||||||+++|||+| |+.||..... .+...... ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~---~~~~~~~~----~~~ 230 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN---QEVLQHVT----AGG 230 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH---HHHHHHHh----cCC
Confidence 976533222222223345678999999999999999999999999999998 9999864321 11111110 000
Q ss_pred cccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 002647 728 GLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775 (897)
Q Consensus 728 ~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~ 775 (897)
.. .........+.+++.+||+.+|.+||++.+|++.|+
T Consensus 231 ~~----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 231 RL----------QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred cc----------CCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 00 111223456789999999999999999999998875
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-36 Score=330.84 Aligned_cols=237 Identities=26% Similarity=0.334 Sum_probs=187.6
Q ss_pred eEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHH-HHhhccCCceeeEeeeeecCCceEEEEeeccC
Q 002647 505 RIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELE-MLSRLHHRNLVKLFGVCIEDNNRCLVYELIHN 579 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~-iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~g 579 (897)
++||+|+||+||+|+.. +|+.||+|++.... ......+.+|.. +++.++|+||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 47999999999999965 68899999987532 222344555654 67889999999999999999999999999999
Q ss_pred CccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcc
Q 002647 580 GSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH 659 (897)
Q Consensus 580 GSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~ 659 (897)
|+|.+++.. ...+.+.++..++.||++||+|||+.+ |+||||||+||||+.++.+||+|||+++..... ..
T Consensus 81 ~~L~~~l~~----~~~~~~~~~~~~~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~--~~ 151 (321)
T cd05603 81 GELFFHLQR----ERCFLEPRARFYAAEVASAIGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP--EE 151 (321)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEccCCCCccCCCC--CC
Confidence 999988842 346888999999999999999999887 999999999999999999999999998753221 12
Q ss_pred cccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhcc
Q 002647 660 ISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIES 739 (897)
Q Consensus 660 ~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~ 739 (897)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...+. ..+.. ..... . .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---~~~~~---~i~~~----------~--~ 213 (321)
T cd05603 152 TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV---SQMYD---NILHK----------P--L 213 (321)
T ss_pred ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH---HHHHH---HHhcC----------C--C
Confidence 23446789999999999988999999999999999999999999964321 11111 11100 0 0
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHH
Q 002647 740 NISYDTLVKVAAIASMCVQPEVSHRPFMG 768 (897)
Q Consensus 740 ~~~~e~~~~L~~Li~~CL~~dP~~RPTm~ 768 (897)
..+......+.+++.+||+.||.+|++..
T Consensus 214 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 214 QLPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 11222345678999999999999999764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=321.14 Aligned_cols=253 Identities=26% Similarity=0.398 Sum_probs=198.3
Q ss_pred HhhCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccccchHHHHHHHHHHhhc-cCCceeeEeeeeecC------
Q 002647 496 KATNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLAELEMLSRL-HHRNLVKLFGVCIED------ 567 (897)
Q Consensus 496 ~at~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~------ 567 (897)
.+++.|+..+.||+|+||+||+|... +++.||+|++.... .....+.+|+.++.++ +|+||+++++++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 35677888899999999999999965 58899999987543 3346788999999998 799999999998753
Q ss_pred CceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccC
Q 002647 568 NNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFG 647 (897)
Q Consensus 568 ~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFG 647 (897)
...++||||+.+|+|.+++... ....+++..+..++.|++.||+|||+.+ |+|+|||++||++++++.+||+|||
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~--~~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivh~dl~~~nili~~~~~~~l~Dfg 156 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNT--KGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFG 156 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHEEECCCCCEEEccCC
Confidence 3578999999999999998642 2346899999999999999999999987 9999999999999999999999999
Q ss_pred cchhcccCCCcccccccccccccCChhhhh-----cCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhc
Q 002647 648 LARTALDEGNKHISTHVMGTFGYLAPEYAM-----TGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPL 722 (897)
Q Consensus 648 LAr~~~~~~~~~~~t~~~GT~~Y~APE~l~-----~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l 722 (897)
+++..... ........|+..|+|||++. ...++.++|||||||++|||++|+.||+....... +...
T Consensus 157 ~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~-----~~~~- 228 (272)
T cd06637 157 VSAQLDRT--VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA-----LFLI- 228 (272)
T ss_pred Cceecccc--cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHH-----HHHH-
Confidence 98754221 12233467899999999986 34578899999999999999999999964321111 0000
Q ss_pred ccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 723 LTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 723 ~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
. ........ .......+.+|+.+||+.+|.+||++.||++
T Consensus 229 ~--~~~~~~~~--------~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 229 P--RNPAPRLK--------SKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred h--cCCCCCCC--------CCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 0 00011111 1112346789999999999999999999875
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-36 Score=316.35 Aligned_cols=254 Identities=26% Similarity=0.406 Sum_probs=203.6
Q ss_pred hCCceeeeEEeecCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeec
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELI 577 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~ 577 (897)
.++|++.+.||+|+||.||+|...++..+|+|.++... ...+.|.+|++++++++|+||+++.+++.+ ...+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~ 82 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM 82 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence 46788999999999999999998778889999887542 234678999999999999999999999887 7789999999
Q ss_pred cCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCC
Q 002647 578 HNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN 657 (897)
Q Consensus 578 ~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~ 657 (897)
++|+|.+++... ....+++..++.++.|++.||+|||+.+ ++|+||||+||+++.++.+||+|||++.......
T Consensus 83 ~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~- 156 (260)
T cd05073 83 AKGSLLDFLKSD--EGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNE- 156 (260)
T ss_pred CCCcHHHHHHhC--CccccCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCCcceeeccCCC-
Confidence 999999999642 2346899999999999999999999887 9999999999999999999999999987543221
Q ss_pred cccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccccccch
Q 002647 658 KHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPV 736 (897)
Q Consensus 658 ~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~ 736 (897)
........++..|+|||++....++.++|||||||++|||+| |+.||..... ..+..+... ....
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~---~~~~~~~~~----~~~~------- 222 (260)
T cd05073 157 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN---PEVIRALER----GYRM------- 222 (260)
T ss_pred cccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH---HHHHHHHhC----CCCC-------
Confidence 111222345678999999998889999999999999999999 9999864321 112221110 0000
Q ss_pred hccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002647 737 IESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKL 776 (897)
Q Consensus 737 l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~ 776 (897)
.........+.+++.+|++.+|++||++.++.+.|+.
T Consensus 223 ---~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 223 ---PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred ---CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0111233568899999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-36 Score=349.21 Aligned_cols=268 Identities=21% Similarity=0.326 Sum_probs=196.7
Q ss_pred HHHHHHhhCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccccchHHHHHHHHHHhhccCC------ceeeEeee
Q 002647 491 LNDIEKATNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLAELEMLSRLHHR------NLVKLFGV 563 (897)
Q Consensus 491 ~~ei~~at~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~Hp------NIV~Llg~ 563 (897)
.+++....++|++.++||+|+||+||+|... +++.||||+++.... ..+++..|++++++++|. ++++++++
T Consensus 121 ~~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~ 199 (467)
T PTZ00284 121 GEDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK-YTRDAKIEIQFMEKVRQADPADRFPLMKIQRY 199 (467)
T ss_pred CCccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchh-hHHHHHHHHHHHHHHhhcCcccCcceeeeEEE
Confidence 3445556789999999999999999999964 578899999975322 234567788888777654 58899998
Q ss_pred eecC-CceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhcc-CCCcEEecCCCCCcEEEccCC--
Q 002647 564 CIED-NNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHED-SSPRVIHRDFKSSNILLEHDF-- 639 (897)
Q Consensus 564 ~~~~-~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~-gsp~IIHrDIKpsNILLd~~~-- 639 (897)
+..+ ...|+|||++ +++|.+++.. ...+++..+..|+.||+.||+|||.+ + ||||||||+|||++.++
T Consensus 200 ~~~~~~~~~iv~~~~-g~~l~~~l~~----~~~l~~~~~~~i~~qi~~aL~yLH~~~g---IiHrDlKP~NILl~~~~~~ 271 (467)
T PTZ00284 200 FQNETGHMCIVMPKY-GPCLLDWIMK----HGPFSHRHLAQIIFQTGVALDYFHTELH---LMHTDLKPENILMETSDTV 271 (467)
T ss_pred EEcCCceEEEEEecc-CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEecCCcc
Confidence 8765 4678999988 7788888853 35699999999999999999999974 6 99999999999998765
Q ss_pred --------------ceEEeccCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCC
Q 002647 640 --------------TPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 705 (897)
Q Consensus 640 --------------~vKLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd 705 (897)
.+||+|||++.... ...+...||..|+|||++.+..++.++|||||||+||||+||+.||+
T Consensus 272 ~~~~~~~~~~~~~~~vkl~DfG~~~~~~-----~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~ 346 (467)
T PTZ00284 272 VDPVTNRALPPDPCRVRICDLGGCCDER-----HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYD 346 (467)
T ss_pred cccccccccCCCCceEEECCCCccccCc-----cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 49999999875321 12345679999999999999999999999999999999999999997
Q ss_pred CCCCCCchhhHH---------hhhh--------cccccccccccccchhccC----C---CHHHHHHHHHHHHHccCCCC
Q 002647 706 LSQPPGQENLVA---------WARP--------LLTTKEGLKTIIDPVIESN----I---SYDTLVKVAAIASMCVQPEV 761 (897)
Q Consensus 706 ~~~~~~~~~lv~---------w~~~--------l~~~~e~l~~iiDp~l~~~----~---~~e~~~~L~~Li~~CL~~dP 761 (897)
.....+...++. |... ++.....+....++..... . .......+.+|+.+||+.||
T Consensus 347 ~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP 426 (467)
T PTZ00284 347 THDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDR 426 (467)
T ss_pred CCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcCh
Confidence 654322111111 1110 0000000111111110000 0 00113457799999999999
Q ss_pred CCCCCHHHHHH
Q 002647 762 SHRPFMGEVVQ 772 (897)
Q Consensus 762 ~~RPTm~EVl~ 772 (897)
++||++.|+++
T Consensus 427 ~~R~ta~e~L~ 437 (467)
T PTZ00284 427 QKRLNARQMTT 437 (467)
T ss_pred hhCCCHHHHhc
Confidence 99999999986
|
|
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-36 Score=330.97 Aligned_cols=240 Identities=26% Similarity=0.369 Sum_probs=191.0
Q ss_pred eEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhc-cCCceeeEeeeeecCCceEEEEeeccC
Q 002647 505 RIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRL-HHRNLVKLFGVCIEDNNRCLVYELIHN 579 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~~~~~LV~Ey~~g 579 (897)
+.||+|+||+||+|... +++.||||+++... ....+.+..|..++..+ +|+||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999965 57899999997532 23345677788888764 999999999999999999999999999
Q ss_pred CccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcc
Q 002647 580 GSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH 659 (897)
Q Consensus 580 GSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~ 659 (897)
|+|.+++.. ...+++.++..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 g~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~ 151 (316)
T cd05619 81 GDLMFHIQS----CHKFDLPRATFYAAEIICGLQFLHSKG---IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD--A 151 (316)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEccCCcceECCCCC--C
Confidence 999999853 346899999999999999999999987 9999999999999999999999999987432211 1
Q ss_pred cccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhcc
Q 002647 660 ISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIES 739 (897)
Q Consensus 660 ~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~ 739 (897)
......||..|+|||++.+..++.++|||||||++|||++|+.||..... ..+..... .. .+.
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~---~~~~~~i~---~~--------~~~--- 214 (316)
T cd05619 152 KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE---EELFQSIR---MD--------NPC--- 214 (316)
T ss_pred ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH---HHHHHHHH---hC--------CCC---
Confidence 22345789999999999998999999999999999999999999964332 11111110 00 000
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHH-HHH
Q 002647 740 NISYDTLVKVAAIASMCVQPEVSHRPFMG-EVV 771 (897)
Q Consensus 740 ~~~~e~~~~L~~Li~~CL~~dP~~RPTm~-EVl 771 (897)
++......+.+++.+||+.||++||++. ++.
T Consensus 215 -~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 215 -YPRWLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred -CCccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 1111224567899999999999999997 543
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-36 Score=314.76 Aligned_cols=250 Identities=23% Similarity=0.321 Sum_probs=201.1
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeecc-cccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeec
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRA-NQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELI 577 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~-~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~ 577 (897)
+|++.++||+|+||.||++... +++.+|+|.++.. .....+.+.+|+.++++++|+||+++++.+..++..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4788999999999999999965 6889999998643 2334467889999999999999999999999999999999999
Q ss_pred cCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCC
Q 002647 578 HNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN 657 (897)
Q Consensus 578 ~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~ 657 (897)
++|+|.+++... ....+++..++.++.|++.||.|||+.+ |+|+||||+|||+++++.++|+|||+++......
T Consensus 81 ~~~~l~~~~~~~--~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~- 154 (255)
T cd08219 81 DGGDLMQKIKLQ--RGKLFPEDTILQWFVQMCLGVQHIHEKR---VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG- 154 (255)
T ss_pred CCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEECCCCcEEEcccCcceeecccc-
Confidence 999999988532 2346889999999999999999999988 9999999999999999999999999987553221
Q ss_pred cccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchh
Q 002647 658 KHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVI 737 (897)
Q Consensus 658 ~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l 737 (897)
.......|+..|+|||++.+..++.++||||||+++|+|++|+.||+.... .... ..... .....
T Consensus 155 -~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~---~~~~---~~~~~--~~~~~------ 219 (255)
T cd08219 155 -AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW---KNLI---LKVCQ--GSYKP------ 219 (255)
T ss_pred -cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH---HHHH---HHHhc--CCCCC------
Confidence 122345688999999999988899999999999999999999999964321 1111 11100 00110
Q ss_pred ccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 738 ESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 738 ~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
.+......+.+++.+||+.||++||++.||+..
T Consensus 220 ---~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 220 ---LPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ---CCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 111223457889999999999999999999764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-37 Score=333.30 Aligned_cols=249 Identities=23% Similarity=0.368 Sum_probs=208.1
Q ss_pred hCCceeeeEEeecCceEEEEEEe-cCCCEEEEEEeecccccch---HHHHHHHHHHhhccCCceeeEeeeeecCCceEEE
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRANQHGG---REFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLV 573 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~~~~~~---~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV 573 (897)
..+|++.+.||+|.||+|-+|.. ..|+.||||.|++..-.+. -.+.+|+++|..|+||||+.++.+|+..+...||
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 35688889999999999999994 6899999999987554433 4577899999999999999999999999999999
Q ss_pred EeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcc
Q 002647 574 YELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTAL 653 (897)
Q Consensus 574 ~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~ 653 (897)
|||..+|.|+||+. ..+.|++.+...++.||..|+.|+|+++ ++|||||.+|||||+|+++||+||||+..+.
T Consensus 132 MEYaS~GeLYDYiS----er~~LsErEaRhfFRQIvSAVhYCHknr---VvHRDLKLENILLD~N~NiKIADFGLSNly~ 204 (668)
T KOG0611|consen 132 MEYASGGELYDYIS----ERGSLSEREARHFFRQIVSAVHYCHKNR---VVHRDLKLENILLDQNNNIKIADFGLSNLYA 204 (668)
T ss_pred EEecCCccHHHHHH----HhccccHHHHHHHHHHHHHHHHHHhhcc---ceecccchhheeecCCCCeeeeccchhhhhc
Confidence 99999999999995 3567999999999999999999999988 9999999999999999999999999998763
Q ss_pred cCCCcccccccccccccCChhhhhcCCCC-ccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccccccccc
Q 002647 654 DEGNKHISTHVMGTFGYLAPEYAMTGHLL-VKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTI 732 (897)
Q Consensus 654 ~~~~~~~~t~~~GT~~Y~APE~l~~~~~t-~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~i 732 (897)
. ....++++|++-|.+||++.+.+|. ...|-|||||+||-|+.|..|||+.+ ..+++.-..
T Consensus 205 ~---~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~D---hk~lvrQIs------------ 266 (668)
T KOG0611|consen 205 D---KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRD---HKRLVRQIS------------ 266 (668)
T ss_pred c---ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCch---HHHHHHHhh------------
Confidence 3 3345678999999999999999884 78999999999999999999998643 223332111
Q ss_pred ccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 002647 733 IDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775 (897)
Q Consensus 733 iDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~ 775 (897)
..... ..+.......||+|||..||++|-|+.+|.....
T Consensus 267 -~GaYr---EP~~PSdA~gLIRwmLmVNP~RRATieDiAsHWW 305 (668)
T KOG0611|consen 267 -RGAYR---EPETPSDASGLIRWMLMVNPERRATIEDIASHWW 305 (668)
T ss_pred -ccccc---CCCCCchHHHHHHHHHhcCcccchhHHHHhhhhe
Confidence 00000 1112223457899999999999999999987653
|
|
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-36 Score=318.06 Aligned_cols=257 Identities=29% Similarity=0.409 Sum_probs=202.9
Q ss_pred CCceeeeEEeecCceEEEEEEecC----CCEEEEEEeeccc-ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILDD----GREVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLV 573 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~~----g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV 573 (897)
++|.+.++||+|+||.||+|...+ ...||||...... ....+.+.+|+.++++++|+||+++++++.+ +..++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 467888999999999999998643 2468999887544 3345679999999999999999999999875 557899
Q ss_pred EeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcc
Q 002647 574 YELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTAL 653 (897)
Q Consensus 574 ~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~ 653 (897)
|||+++|+|.+++... ...+++.+++.++.|++.||+|||+.+ ++||||||+|||++.++.+||+|||+++...
T Consensus 85 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 158 (270)
T cd05056 85 MELAPLGELRSYLQVN---KYSLDLASLILYSYQLSTALAYLESKR---FVHRDIAARNVLVSSPDCVKLGDFGLSRYLE 158 (270)
T ss_pred EEcCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccChheEEEecCCCeEEccCceeeecc
Confidence 9999999999999532 235899999999999999999999887 9999999999999999999999999987653
Q ss_pred cCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhccccccccccc
Q 002647 654 DEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTI 732 (897)
Q Consensus 654 ~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~i 732 (897)
.. .........++..|+|||.+....++.++||||||+++|||++ |+.||...... ....+.. .....
T Consensus 159 ~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~---~~~~~~~----~~~~~--- 227 (270)
T cd05056 159 DE-SYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN---DVIGRIE----NGERL--- 227 (270)
T ss_pred cc-cceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH---HHHHHHH----cCCcC---
Confidence 32 1112223344568999999988889999999999999999996 99999644321 1111111 00000
Q ss_pred ccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHhh
Q 002647 733 IDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNE 780 (897)
Q Consensus 733 iDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~~e 780 (897)
..+......+.+++.+|+..+|++||++.|+++.|+.+.++
T Consensus 228 -------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 228 -------PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred -------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 01122335688899999999999999999999999887654
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-36 Score=335.69 Aligned_cols=203 Identities=27% Similarity=0.394 Sum_probs=174.9
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~ 574 (897)
++|+..+.||+|+||+||++... +++.||||+++... ......+.+|++++.+++|+||+++++.+.+++..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46889999999999999999965 68999999997532 233456888999999999999999999999999999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||||+.++.+||+|||+++....
T Consensus 81 E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~~L~~lH~~g---ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~ 153 (360)
T cd05627 81 EFLPGGDMMTLLMK----KDTLSEEATQFYIAETVLAIDAIHQLG---FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKK 153 (360)
T ss_pred eCCCCccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEeeccCCccccc
Confidence 99999999999853 346899999999999999999999988 99999999999999999999999999874321
Q ss_pred CCC---------------------------------cccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCC
Q 002647 655 EGN---------------------------------KHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGR 701 (897)
Q Consensus 655 ~~~---------------------------------~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk 701 (897)
... ........||+.|+|||++.+..++.++|||||||++|||+||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~ 233 (360)
T cd05627 154 AHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (360)
T ss_pred ccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCC
Confidence 100 00112357999999999999999999999999999999999999
Q ss_pred CCCCCCC
Q 002647 702 KPVDLSQ 708 (897)
Q Consensus 702 ~Pfd~~~ 708 (897)
.||....
T Consensus 234 ~Pf~~~~ 240 (360)
T cd05627 234 PPFCSET 240 (360)
T ss_pred CCCCCCC
Confidence 9997543
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=350.66 Aligned_cols=256 Identities=27% Similarity=0.434 Sum_probs=213.7
Q ss_pred eeeEEeecCceEEEEEEe-cCC----CEEEEEEeecc-cccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 503 TSRIIGEGGFGVVYRGIL-DDG----REVAVKVLKRA-NQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 503 ~~~~LG~G~fGtVyka~l-~~g----~~VAVK~lk~~-~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
..++||+|+||+||||.+ .+| -+||+|++... ......++++|+-+|.+|+|+|+++|+|+|.... ..||++|
T Consensus 700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~ 778 (1177)
T KOG1025|consen 700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQL 778 (1177)
T ss_pred hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHh
Confidence 357999999999999995 344 35899988653 3445678999999999999999999999998865 7899999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
|+.|+|.||++. .+..|..+..+.|..|||+||.|||++. ++||||..+||||.+-..+||.|||+++....++
T Consensus 779 mP~G~LlDyvr~---hr~~igsq~lLnw~~QIAkgM~YLe~qr---lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~ 852 (1177)
T KOG1025|consen 779 MPLGCLLDYVRE---HRDNIGSQDLLNWCYQIAKGMKYLEEQR---LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDE 852 (1177)
T ss_pred cccchHHHHHHH---hhccccHHHHHHHHHHHHHHHHHHHhcc---hhhhhhhhhheeecCCCeEEEEecchhhccCccc
Confidence 999999999974 4567999999999999999999999887 9999999999999999999999999999877666
Q ss_pred CcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccccccc
Q 002647 657 NKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDP 735 (897)
Q Consensus 657 ~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp 735 (897)
.+.......-.+.|||=|.+....|+.++|||||||.+|||+| |..|++.....+..++. ...+++
T Consensus 853 ~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dll-------e~geRL------ 919 (1177)
T KOG1025|consen 853 KEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLL-------EKGERL------ 919 (1177)
T ss_pred ccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHH-------hccccC------
Confidence 6555555555678999999999999999999999999999999 99999876544433332 112211
Q ss_pred hhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHhhhh
Q 002647 736 VIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNEFD 782 (897)
Q Consensus 736 ~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~~e~~ 782 (897)
.-+.-+...+..++..||..|++.||+++|+...+..+.++..
T Consensus 920 ----sqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardpq 962 (1177)
T KOG1025|consen 920 ----SQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDPQ 962 (1177)
T ss_pred ----CCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCcc
Confidence 1234456678889999999999999999999999987766543
|
|
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-36 Score=314.01 Aligned_cols=249 Identities=26% Similarity=0.406 Sum_probs=202.8
Q ss_pred CCceeeeEEeecCceEEEEEEecC-CCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeec
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILDD-GREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELI 577 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~~-g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~ 577 (897)
++|+..+.||+|+||.||+|...+ +..+++|.+..... .+++.+|++++++++|+||+++++++.++...++++||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 578888999999999999999764 78999999875533 578999999999999999999999999999999999999
Q ss_pred cCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCC
Q 002647 578 HNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN 657 (897)
Q Consensus 578 ~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~ 657 (897)
.+++|.+++.. ....+++..++.++.|+++||.|||+.+ |+|+||+|+||++++++.+||+|||++........
T Consensus 81 ~~~~L~~~l~~---~~~~l~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~ 154 (256)
T cd06612 81 GAGSVSDIMKI---TNKTLTEEEIAAILYQTLKGLEYLHSNK---KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA 154 (256)
T ss_pred CCCcHHHHHHh---CccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEECCCCcEEEcccccchhcccCcc
Confidence 99999999853 2356899999999999999999999887 99999999999999999999999999886533221
Q ss_pred cccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchh
Q 002647 658 KHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVI 737 (897)
Q Consensus 658 ~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l 737 (897)
......++..|+|||++.+..++.++||||||+++|||++|+.||......... .... .. .....
T Consensus 155 --~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~--~~~~-------~~----~~~~~ 219 (256)
T cd06612 155 --KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAI--FMIP-------NK----PPPTL 219 (256)
T ss_pred --ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhh--hhhc-------cC----CCCCC
Confidence 223455788999999999889999999999999999999999999743321110 0000 00 00000
Q ss_pred ccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 738 ESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 738 ~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
..+......+.+++.+||+.||++||++.||++
T Consensus 220 --~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 220 --SDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred --CchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 011222346788999999999999999999975
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-36 Score=320.39 Aligned_cols=247 Identities=24% Similarity=0.326 Sum_probs=193.5
Q ss_pred EeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccCCcc
Q 002647 507 IGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSL 582 (897)
Q Consensus 507 LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~gGSL 582 (897)
||+|+||+||++..+ +|+.||+|.+.... ......+..|++++++++|+||+++++++..+...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999964 68999999986422 12234566799999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCccccc
Q 002647 583 ESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIST 662 (897)
Q Consensus 583 ~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~~~t 662 (897)
.+++... ....+++..++.++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||++...... ....
T Consensus 81 ~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~---~~~~ 152 (277)
T cd05607 81 KYHIYNV--GERGLEMERVIHYSAQITCGILHLHSMD---IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG---KTIT 152 (277)
T ss_pred HHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHHCC---EEEccCChHhEEEcCCCCEEEeeceeeeecCCC---ceee
Confidence 9888532 2345899999999999999999999887 999999999999999999999999998765322 1223
Q ss_pred ccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhccCCC
Q 002647 663 HVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESNIS 742 (897)
Q Consensus 663 ~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~ 742 (897)
...|+..|+|||++.+..++.++|||||||++|||++|+.||....... +.....+.... ..+.. ..
T Consensus 153 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~--~~~~~~~~~~~----------~~~~~-~~ 219 (277)
T cd05607 153 QRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKV--AKEELKRRTLE----------DEVKF-EH 219 (277)
T ss_pred ccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchh--hHHHHHHHhhc----------ccccc-cc
Confidence 4568999999999998889999999999999999999999996432211 11111111110 00000 00
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002647 743 YDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL 774 (897)
Q Consensus 743 ~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L 774 (897)
......+.+|+..||+.||++||+++|+++.+
T Consensus 220 ~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 220 QNFTEESKDICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred ccCCHHHHHHHHHHhccCHhhCCCCccchhhh
Confidence 11234578999999999999999998876544
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-36 Score=330.24 Aligned_cols=240 Identities=24% Similarity=0.362 Sum_probs=191.1
Q ss_pred eEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhc-cCCceeeEeeeeecCCceEEEEeeccC
Q 002647 505 RIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRL-HHRNLVKLFGVCIEDNNRCLVYELIHN 579 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~~~~~LV~Ey~~g 579 (897)
++||+|+||.||+|... +|+.||||+++... ....+.+..|..++..+ +|+||+++++++.+.+..++||||+.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 47999999999999965 68899999997532 23345677788888764 899999999999999999999999999
Q ss_pred CccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcc
Q 002647 580 GSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH 659 (897)
Q Consensus 580 GSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~ 659 (897)
|+|.+++.. ...+++.++..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++..... ..
T Consensus 81 g~L~~~i~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~ 151 (316)
T cd05620 81 GDLMFHIQD----KGRFDLYRATFYAAEIVCGLQFLHSKG---IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG--DN 151 (316)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEeCccCCCeecccC--CC
Confidence 999998853 346899999999999999999999988 999999999999999999999999998743211 12
Q ss_pred cccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhcc
Q 002647 660 ISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIES 739 (897)
Q Consensus 660 ~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~ 739 (897)
......||..|+|||++.+..++.++|||||||++|||++|+.||..... ..+... +... .+.
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~---~~~~~~---~~~~--------~~~--- 214 (316)
T cd05620 152 RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE---DELFES---IRVD--------TPH--- 214 (316)
T ss_pred ceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH---HHHHHH---HHhC--------CCC---
Confidence 23456799999999999999999999999999999999999999964321 111111 0000 011
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHH-HHH
Q 002647 740 NISYDTLVKVAAIASMCVQPEVSHRPFMG-EVV 771 (897)
Q Consensus 740 ~~~~e~~~~L~~Li~~CL~~dP~~RPTm~-EVl 771 (897)
++.....++.+++.+||+.||++|+++. ++.
T Consensus 215 -~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 215 -YPRWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred -CCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 1111234577899999999999999985 443
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-36 Score=319.10 Aligned_cols=264 Identities=23% Similarity=0.285 Sum_probs=193.7
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccc--cchHHHHHHHHHHhhc---cCCceeeEeeeeecC-----C
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQ--HGGREFLAELEMLSRL---HHRNLVKLFGVCIED-----N 568 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~--~~~~~f~~Ev~iL~~L---~HpNIV~Llg~~~~~-----~ 568 (897)
+|++.+.||+|+||+||+|... +|+.||+|.++.... .....+.+|+++++++ +|+||+++++++... .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4888999999999999999965 688999999875322 2234567788877766 699999999988642 3
Q ss_pred ceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCc
Q 002647 569 NRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGL 648 (897)
Q Consensus 569 ~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGL 648 (897)
..++||||+.+ +|.+++.... ...+++.++..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~kl~dfg~ 154 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVP--PPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGQVKLADFGL 154 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccCc
Confidence 47899999975 8888885422 245899999999999999999999988 99999999999999999999999999
Q ss_pred chhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCch-hhHHhhhhccc---
Q 002647 649 ARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQE-NLVAWARPLLT--- 724 (897)
Q Consensus 649 Ar~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~-~lv~w~~~l~~--- 724 (897)
++..... .......||..|+|||++.+..++.++|||||||++|||++|+.||......+.. ....+......
T Consensus 155 ~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 231 (288)
T cd07863 155 ARIYSCQ---MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW 231 (288)
T ss_pred cccccCc---ccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhC
Confidence 9765321 1223456899999999999889999999999999999999999998644321111 11111000000
Q ss_pred --ccccccccccchhc---cCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 725 --TKEGLKTIIDPVIE---SNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 725 --~~e~l~~iiDp~l~---~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
..........+... .....+....+.+++.+|++.||++||++.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 232 PRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred cccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00000000000000 0011123356789999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-36 Score=337.11 Aligned_cols=265 Identities=26% Similarity=0.369 Sum_probs=197.6
Q ss_pred CceeeeEEeecCceEEEEEEe-cCCCEEEEEEeecc--cccchHHHHHHHHHHhhccCCceeeEeeeeecCC-----ceE
Q 002647 500 GFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRA--NQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDN-----NRC 571 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~--~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~-----~~~ 571 (897)
+|++.++||+|+||+||+|.. .+|+.||||++... .....+.+.+|+++|+.++|+||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 477889999999999999996 47899999998643 2233467889999999999999999999998766 789
Q ss_pred EEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchh
Q 002647 572 LVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLART 651 (897)
Q Consensus 572 LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~ 651 (897)
+|+||+. ++|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 81 lv~e~~~-~~l~~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~a~~ 152 (372)
T cd07853 81 VVTELMQ-SDLHKIIVS----PQPLSSDHVKVFLYQILRGLKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLARV 152 (372)
T ss_pred EEeeccc-cCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHHEEECCCCCEEeccccceee
Confidence 9999996 578777742 356999999999999999999999988 99999999999999999999999999975
Q ss_pred cccCCCcccccccccccccCChhhhhcC-CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcc------c
Q 002647 652 ALDEGNKHISTHVMGTFGYLAPEYAMTG-HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLL------T 724 (897)
Q Consensus 652 ~~~~~~~~~~t~~~GT~~Y~APE~l~~~-~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~------~ 724 (897)
..... ........++..|+|||++.+. .++.++|||||||++|||++|+.||...........+....... .
T Consensus 153 ~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~ 231 (372)
T cd07853 153 EEPDE-SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRS 231 (372)
T ss_pred cccCc-cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHH
Confidence 43221 1222345678999999998764 47899999999999999999999997544322111111000000 0
Q ss_pred ccccccccc-----c-chhc--cCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 725 TKEGLKTII-----D-PVIE--SNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 725 ~~e~l~~ii-----D-p~l~--~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
..+.....+ . +... .....+....+.+|+.+||+.||++||++.|+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 232 ACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred hhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 000000000 0 0000 01112224567899999999999999999999764
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-36 Score=330.67 Aligned_cols=241 Identities=25% Similarity=0.352 Sum_probs=193.5
Q ss_pred eEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhc-cCCceeeEeeeeecCCceEEEEeeccC
Q 002647 505 RIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRL-HHRNLVKLFGVCIEDNNRCLVYELIHN 579 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~~~~~LV~Ey~~g 579 (897)
++||+|+||+||+|... +++.||||+++... ......+.+|.+++..+ +|+||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999965 57899999998532 23345678899999888 799999999999999999999999999
Q ss_pred CccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcc
Q 002647 580 GSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH 659 (897)
Q Consensus 580 GSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~ 659 (897)
|+|.+++.. ...+++.++..++.|++.||.|||+.+ |+||||||+|||+++++.+||+|||+++...... .
T Consensus 81 ~~L~~~~~~----~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--~ 151 (318)
T cd05570 81 GDLMFHIQR----SGRFDEPRARFYAAEIVLGLQFLHERG---IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG--V 151 (318)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEccCCCHHHeEECCCCcEEecccCCCeecCcCC--C
Confidence 999988853 346999999999999999999999887 9999999999999999999999999987432211 1
Q ss_pred cccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhcc
Q 002647 660 ISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIES 739 (897)
Q Consensus 660 ~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~ 739 (897)
......|+..|+|||++.+..++.++|||||||++|||++|+.||..... ..+... +.... .
T Consensus 152 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~---~~~~~~---i~~~~--------~---- 213 (318)
T cd05570 152 TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE---DELFQS---ILEDE--------V---- 213 (318)
T ss_pred cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH---HHHHHH---HHcCC--------C----
Confidence 22345689999999999999999999999999999999999999964331 111111 11000 0
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 002647 740 NISYDTLVKVAAIASMCVQPEVSHRPFM-----GEVVQ 772 (897)
Q Consensus 740 ~~~~e~~~~L~~Li~~CL~~dP~~RPTm-----~EVl~ 772 (897)
.++......+.+|+.+||+.||++||++ .++++
T Consensus 214 ~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 214 RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 0111223467899999999999999999 66654
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-36 Score=345.88 Aligned_cols=264 Identities=23% Similarity=0.284 Sum_probs=194.8
Q ss_pred hhCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecC--------
Q 002647 497 ATNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIED-------- 567 (897)
Q Consensus 497 at~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~-------- 567 (897)
...+|.+.++||+|+||+||+|+.. +++.||||++.... ....+|+.+|++++|+|||++++++...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 3567999999999999999999964 68899999886432 3345799999999999999999886432
Q ss_pred CceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCC-ceEEecc
Q 002647 568 NNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDF-TPKVSDF 646 (897)
Q Consensus 568 ~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~-~vKLsDF 646 (897)
...++||||+++ +|.+++.........+++..+..++.||+.||+|||+.+ |+||||||+||||+.++ .+||+||
T Consensus 140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~---IiHrDLKp~NILl~~~~~~vkL~DF 215 (440)
T PTZ00036 140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF---ICHRDLKPQNLLIDPNTHTLKLCDF 215 (440)
T ss_pred eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCcCHHHEEEcCCCCceeeecc
Confidence 135689999975 777776543334567999999999999999999999988 99999999999999664 7999999
Q ss_pred CcchhcccCCCcccccccccccccCChhhhhcC-CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccc
Q 002647 647 GLARTALDEGNKHISTHVMGTFGYLAPEYAMTG-HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTT 725 (897)
Q Consensus 647 GLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~-~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~ 725 (897)
|+++...... ......||+.|+|||++.+. .++.++|||||||+||||++|+.||......+ .+....+.+-..
T Consensus 216 Gla~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~--~~~~i~~~~~~p 290 (440)
T PTZ00036 216 GSAKNLLAGQ---RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVD--QLVRIIQVLGTP 290 (440)
T ss_pred ccchhccCCC---CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHHHhCCC
Confidence 9998653322 12345689999999998754 68999999999999999999999997543221 111111100000
Q ss_pred -ccc------------ccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 726 -KEG------------LKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 726 -~e~------------l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
.+. ...+....+...++.....++.+|+.+||+.||.+||++.|+++.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 291 TEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred CHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 000 000000111111122233568899999999999999999999854
|
|
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-36 Score=316.68 Aligned_cols=251 Identities=27% Similarity=0.450 Sum_probs=192.9
Q ss_pred eEEeecCceEEEEEEec----CCCEEEEEEeecc-cccchHHHHHHHHHHhhccCCceeeEeeeeec-CCceEEEEeecc
Q 002647 505 RIIGEGGFGVVYRGILD----DGREVAVKVLKRA-NQHGGREFLAELEMLSRLHHRNLVKLFGVCIE-DNNRCLVYELIH 578 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~----~g~~VAVK~lk~~-~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~-~~~~~LV~Ey~~ 578 (897)
+.||+|+||.||+|.+. ++..||+|.+... .....+.+.+|+.+++.++|+||+++++++.. ++..++||||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999854 2357999998643 23345678899999999999999999998764 456799999999
Q ss_pred CCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCc
Q 002647 579 NGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNK 658 (897)
Q Consensus 579 gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~ 658 (897)
+|+|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+|||+++++.+||+|||+++........
T Consensus 81 ~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~ 154 (262)
T cd05058 81 HGDLRNFIRSE---THNPTVKDLIGFGLQVAKGMEYLASKK---FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYY 154 (262)
T ss_pred CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCccccccccCCcce
Confidence 99999999632 235788889999999999999999887 999999999999999999999999999754332111
Q ss_pred c--cccccccccccCChhhhhcCCCCccccEEechhHHHHHHhC-CCCCCCCCCCCchhhHHhhhhcccccccccccccc
Q 002647 659 H--ISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTG-RKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDP 735 (897)
Q Consensus 659 ~--~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTG-k~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp 735 (897)
. ......++..|+|||++....++.++||||||+++|||++| ..||.... ...+..+.. . ... .
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~---~~~~~~~~~---~-~~~------~ 221 (262)
T cd05058 155 SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD---SFDITVYLL---Q-GRR------L 221 (262)
T ss_pred eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC---HHHHHHHHh---c-CCC------C
Confidence 1 11234567789999999888999999999999999999995 55554321 112222111 0 000 0
Q ss_pred hhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 002647 736 VIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVC 778 (897)
Q Consensus 736 ~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~ 778 (897)
. .+......+.+++..||+.+|++||++.||++.|+.+.
T Consensus 222 ~----~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 222 L----QPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred C----CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 0 01112346789999999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-36 Score=319.41 Aligned_cols=253 Identities=27% Similarity=0.363 Sum_probs=188.5
Q ss_pred EEeecCceEEEEEEecC---CCEEEEEEeeccc-ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccCCc
Q 002647 506 IIGEGGFGVVYRGILDD---GREVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGS 581 (897)
Q Consensus 506 ~LG~G~fGtVyka~l~~---g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~gGS 581 (897)
.||+|+||+||+|...+ ...+|+|.+.... ......|.+|+++++.++|+||+++++.|.+....++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999998543 3468888776432 2234578899999999999999999999999999999999999999
Q ss_pred cccccccCCCC-CCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCccc
Q 002647 582 LESHLHGDDKV-NGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHI 660 (897)
Q Consensus 582 L~~~L~~~~~~-~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~~ 660 (897)
|.++|...... ....++...+.++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++..........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD---FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC---EecccccHhheEecCCCcEEEeccccccccccchheec
Confidence 99999654321 234568888999999999999999987 99999999999999999999999999875432221111
Q ss_pred ccccccccccCChhhhhc-------CCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhccccccccccc
Q 002647 661 STHVMGTFGYLAPEYAMT-------GHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTI 732 (897)
Q Consensus 661 ~t~~~GT~~Y~APE~l~~-------~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~i 732 (897)
.....++..|+|||++.. ..++.++|||||||++|||++ |..||..... ...... . . .+....+
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~---~~~~~~--~-~--~~~~~~~ 230 (269)
T cd05042 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSD---EQVLKQ--V-V--REQDIKL 230 (269)
T ss_pred cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCH---HHHHHH--H-h--hccCccC
Confidence 223345678999998753 356789999999999999999 7888854321 111110 0 0 0111112
Q ss_pred ccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002647 733 IDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL 774 (897)
Q Consensus 733 iDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L 774 (897)
.++.+ .......+.+++..|+ .||++||++.||++.|
T Consensus 231 ~~~~~----~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 231 PKPQL----DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred CCCcc----cccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 22222 2223345667888898 4999999999998876
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-36 Score=336.06 Aligned_cols=261 Identities=22% Similarity=0.289 Sum_probs=201.6
Q ss_pred HHHHHHhhCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeec
Q 002647 491 LNDIEKATNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIE 566 (897)
Q Consensus 491 ~~ei~~at~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~ 566 (897)
+.++....++|++.+.||+|+||.||++..+ +++.||+|++.... ....+.+.+|+.+++.++|+||+++++++.+
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 4455566789999999999999999999965 67899999986422 2233567899999999999999999999999
Q ss_pred CCceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEecc
Q 002647 567 DNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDF 646 (897)
Q Consensus 567 ~~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDF 646 (897)
++..++||||+++|+|.+++.. ..++...+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+||
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NIll~~~~~ikL~Df 186 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADF 186 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHEEECCCCCEEEEeC
Confidence 9999999999999999999853 34888899999999999999999988 999999999999999999999999
Q ss_pred CcchhcccCCCcccccccccccccCChhhhhcC----CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhc
Q 002647 647 GLARTALDEGNKHISTHVMGTFGYLAPEYAMTG----HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPL 722 (897)
Q Consensus 647 GLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~----~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l 722 (897)
|+++...... ........||+.|+|||++... .++.++|||||||+||||++|+.||...... .....+
T Consensus 187 G~a~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~------~~~~~i 259 (371)
T cd05622 187 GTCMKMNKEG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV------GTYSKI 259 (371)
T ss_pred CceeEcCcCC-cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHH------HHHHHH
Confidence 9998653221 1222356799999999998754 3788999999999999999999999753221 101111
Q ss_pred ccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHHH
Q 002647 723 LTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSH--RPFMGEVVQAL 774 (897)
Q Consensus 723 ~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~--RPTm~EVl~~L 774 (897)
......+ .+.+ ..+....+.+++..|+..++.+ |+++.|+++..
T Consensus 260 ~~~~~~~-~~~~-------~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 260 MNHKNSL-TFPD-------DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred HcCCCcc-cCCC-------cCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 1111100 0000 1123345778999999844433 78888887654
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-36 Score=315.31 Aligned_cols=251 Identities=27% Similarity=0.464 Sum_probs=199.7
Q ss_pred CceeeeEEeecCceEEEEEEecCCCEEEEEEeecccc------cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEE
Q 002647 500 GFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQ------HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLV 573 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~------~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV 573 (897)
+|...+.||+|+||+||+|...+|+.+|||.++.... ...+.+.+|+++|++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 4677899999999999999988899999999864321 1234688999999999999999999999999999999
Q ss_pred EeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcc
Q 002647 574 YELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTAL 653 (897)
Q Consensus 574 ~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~ 653 (897)
|||+++++|.+++.. ...+++..+..++.|++.||+|||+.+ |+|+||||+||++++++.+||+|||++....
T Consensus 81 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 153 (265)
T cd06631 81 MEFVPGGSISSILNR----FGPLPEPVFCKYTKQILDGVAYLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRLA 153 (265)
T ss_pred EecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHhEEECCCCeEEeccchhhHhhh
Confidence 999999999999953 246889999999999999999999887 9999999999999999999999999987542
Q ss_pred cCC----CcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccc
Q 002647 654 DEG----NKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGL 729 (897)
Q Consensus 654 ~~~----~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l 729 (897)
... .........|+..|+|||++.+..++.++||||||+++|||++|+.||...+... ..... . .....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~--~~~~~----~-~~~~~ 226 (265)
T cd06631 154 WVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLA--AMFYI----G-AHRGL 226 (265)
T ss_pred hccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHH--HHHHh----h-hccCC
Confidence 211 1112233568899999999998889999999999999999999999996432111 11000 0 00000
Q ss_pred cccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 730 KTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 730 ~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
.+. .+......+.+++.+||+.+|++||++.|+++
T Consensus 227 ----~~~----~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 227 ----MPR----LPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred ----CCC----CCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 011 11223356788999999999999999999865
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-36 Score=330.85 Aligned_cols=241 Identities=24% Similarity=0.321 Sum_probs=189.4
Q ss_pred eEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHH-HHhhccCCceeeEeeeeecCCceEEEEeeccC
Q 002647 505 RIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELE-MLSRLHHRNLVKLFGVCIEDNNRCLVYELIHN 579 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~-iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~g 579 (897)
+.||+|+||+||+|+.. +++.||+|++.... ......+.+|.. +++.++|+||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999965 57889999997532 122234455544 56789999999999999999999999999999
Q ss_pred CccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcc
Q 002647 580 GSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH 659 (897)
Q Consensus 580 GSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~ 659 (897)
|+|.+++.. ...+.+..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 ~~L~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH~~g---iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~--~ 151 (325)
T cd05602 81 GELFYHLQR----ERCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN--G 151 (325)
T ss_pred CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEEccCCCCcccccCC--C
Confidence 999999853 345788889999999999999999988 9999999999999999999999999987543221 2
Q ss_pred cccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhcc
Q 002647 660 ISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIES 739 (897)
Q Consensus 660 ~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~ 739 (897)
......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...... +.... .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---~~~~~~---i~~~~----------~-- 213 (325)
T cd05602 152 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT---AEMYDN---ILNKP----------L-- 213 (325)
T ss_pred CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCH---HHHHHH---HHhCC----------c--
Confidence 23456799999999999999999999999999999999999999964321 111111 11000 0
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 740 NISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 740 ~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
....+....+.+++.+|++.||.+|+++.+.+.
T Consensus 214 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 214 QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence 011122346788999999999999999876543
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-36 Score=314.18 Aligned_cols=237 Identities=26% Similarity=0.497 Sum_probs=188.9
Q ss_pred eEEeecCceEEEEEEecCCC-----------EEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEE
Q 002647 505 RIIGEGGFGVVYRGILDDGR-----------EVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLV 573 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~~g~-----------~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV 573 (897)
+.||+|+||.||+|.+.+.. .|++|.++..... ...|.+|+.+|++++|+||+++++++.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 46999999999999976433 5788877654433 5789999999999999999999999988 778999
Q ss_pred EeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCC-------ceEEecc
Q 002647 574 YELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDF-------TPKVSDF 646 (897)
Q Consensus 574 ~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~-------~vKLsDF 646 (897)
|||+++|+|.+++... ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++ .+||+||
T Consensus 79 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dlkp~Nill~~~~~~~~~~~~~kl~Df 152 (259)
T cd05037 79 EEYVKFGPLDVFLHRE---KNNVSLHWKLDVAKQLASALHYLEDKK---LVHGNVCGKNILVARYGLNEGYVPFIKLSDP 152 (259)
T ss_pred EEcCCCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHhhCC---eecccCccceEEEecCccccCCceeEEeCCC
Confidence 9999999999999642 226899999999999999999999887 99999999999999887 7999999
Q ss_pred CcchhcccCCCcccccccccccccCChhhhhcC--CCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcc
Q 002647 647 GLARTALDEGNKHISTHVMGTFGYLAPEYAMTG--HLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLL 723 (897)
Q Consensus 647 GLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~--~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~ 723 (897)
|++..... .....++..|+|||++... .++.++||||||+++|||++ |..|+.............
T Consensus 153 g~a~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~------ 220 (259)
T cd05037 153 GIPITVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ------ 220 (259)
T ss_pred Cccccccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh------
Confidence 99886432 1223467789999998876 78899999999999999999 577775433211111100
Q ss_pred cccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002647 724 TTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL 774 (897)
Q Consensus 724 ~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L 774 (897)
... ..+......+.+++.+||..+|.+||++.||++.|
T Consensus 221 -~~~------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 221 -DQH------------RLPMPDCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred -cCC------------CCCCCCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 000 00111115778999999999999999999998876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=320.12 Aligned_cols=247 Identities=25% Similarity=0.356 Sum_probs=195.3
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccc---cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEe
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQ---HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYE 575 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~---~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~E 575 (897)
.|+..+.||+|+||+||+|... +++.||+|.++.... .....+.+|+++|++++|+|++.+.+++..++..++|||
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 3677899999999999999964 688999999875322 223457889999999999999999999999999999999
Q ss_pred eccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccC
Q 002647 576 LIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655 (897)
Q Consensus 576 y~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~ 655 (897)
|+++|+|.+++... ....+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||++......
T Consensus 81 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~ql~~~l~~lH~~~---iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 155 (285)
T cd05632 81 IMNGGDLKFHIYNM--GNPGFEEERALFYAAEILCGLEDLHREN---TVYRDLKPENILLDDYGHIRISDLGLAVKIPEG 155 (285)
T ss_pred eccCccHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEECCCCCEEEecCCcceecCCC
Confidence 99999999888532 2346999999999999999999999887 999999999999999999999999998754221
Q ss_pred CCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccc
Q 002647 656 GNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDP 735 (897)
Q Consensus 656 ~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp 735 (897)
.......|+..|+|||++.+..++.++||||||+++|||++|+.||........ ...+........
T Consensus 156 ---~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~--~~~~~~~~~~~~--------- 221 (285)
T cd05632 156 ---ESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK--REEVDRRVLETE--------- 221 (285)
T ss_pred ---CcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhhhccc---------
Confidence 112345789999999999988999999999999999999999999974322111 111111111000
Q ss_pred hhccCCCHHHHHHHHHHHHHccCCCCCCCCCHH
Q 002647 736 VIESNISYDTLVKVAAIASMCVQPEVSHRPFMG 768 (897)
Q Consensus 736 ~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~ 768 (897)
..+.......+.+|+..|++.||++||++.
T Consensus 222 ---~~~~~~~~~~~~~li~~~l~~~P~~R~~~~ 251 (285)
T cd05632 222 ---EVYSAKFSEEAKSICKMLLTKDPKQRLGCQ 251 (285)
T ss_pred ---cccCccCCHHHHHHHHHHccCCHhHcCCCc
Confidence 011122334578899999999999999943
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-36 Score=332.00 Aligned_cols=264 Identities=27% Similarity=0.340 Sum_probs=196.5
Q ss_pred hhCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecc--cccchHHHHHHHHHHhhccCCceeeEeeeeecCC-----
Q 002647 497 ATNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRA--NQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDN----- 568 (897)
Q Consensus 497 at~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~--~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~----- 568 (897)
..++|.+.+.||+|+||.||++... +|..||||++... .......+.+|+.+++.++|+||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 3578999999999999999999964 6899999998643 2333467889999999999999999999986543
Q ss_pred -ceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccC
Q 002647 569 -NRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFG 647 (897)
Q Consensus 569 -~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFG 647 (897)
..++||||+++ +|.+.++ ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~~---ivHrDlkp~NIl~~~~~~~kl~Dfg 168 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIH------MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 168 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHh------ccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEecCC
Confidence 46999999975 5666553 24788999999999999999999988 9999999999999999999999999
Q ss_pred cchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchh------------h
Q 002647 648 LARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQEN------------L 715 (897)
Q Consensus 648 LAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~------------l 715 (897)
+++..... .......||..|+|||++.+..++.++|||||||++|||++|+.||...+...... +
T Consensus 169 ~a~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 245 (359)
T cd07876 169 LARTACTN---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEF 245 (359)
T ss_pred CccccccC---ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHH
Confidence 99754221 22234578999999999999999999999999999999999999997543211000 0
Q ss_pred HH----hhhhccccccc-----ccccccchhc---cCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 716 VA----WARPLLTTKEG-----LKTIIDPVIE---SNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 716 v~----w~~~l~~~~e~-----l~~iiDp~l~---~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
.. ....+...... ..++...... ..........+.+|+.+||+.||++|||+.|+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 246 MNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00 00000000000 0000000000 00011123467899999999999999999999875
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-36 Score=318.26 Aligned_cols=253 Identities=25% Similarity=0.345 Sum_probs=189.1
Q ss_pred EEeecCceEEEEEEecCCC---EEEEEEeeccc-ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccCCc
Q 002647 506 IIGEGGFGVVYRGILDDGR---EVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGS 581 (897)
Q Consensus 506 ~LG~G~fGtVyka~l~~g~---~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~gGS 581 (897)
.||+|+||+||+|...++. .+++|.++... ....+.|.+|+++++.++|+||+++++.|......++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 5999999999999865443 45566655432 2344689999999999999999999999999899999999999999
Q ss_pred cccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcccc
Q 002647 582 LESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIS 661 (897)
Q Consensus 582 L~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~~~ 661 (897)
|.++++........+.+..++.++.||++||+|||+.+ |+||||||+|||++.++.+||+|||++............
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 158 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN---FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE 158 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---eeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence 99999754333345677888999999999999999887 999999999999999999999999998643222211222
Q ss_pred cccccccccCChhhhhc-------CCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccccc
Q 002647 662 THVMGTFGYLAPEYAMT-------GHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTII 733 (897)
Q Consensus 662 t~~~GT~~Y~APE~l~~-------~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~ii 733 (897)
....++..|+|||++.. ..++.++||||||+++|||++ |..||..... ..... ... .+....+.
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~---~~~~~---~~~--~~~~~~~~ 230 (268)
T cd05086 159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD---REVLN---HVI--KDQQVKLF 230 (268)
T ss_pred cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH---HHHHH---HHH--hhcccccC
Confidence 34567889999998753 245789999999999999997 5667753321 11111 111 11112233
Q ss_pred cchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002647 734 DPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL 774 (897)
Q Consensus 734 Dp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L 774 (897)
++.+... ....+.+++..|| .+|++||++.||++.|
T Consensus 231 ~~~~~~~----~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l 266 (268)
T cd05086 231 KPQLELP----YSERWYEVLQFCW-LSPEKRATAEEVHRLL 266 (268)
T ss_pred CCccCCC----CcHHHHHHHHHHh-hCcccCCCHHHHHHHh
Confidence 3333222 2345677889999 5799999999998876
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-36 Score=326.08 Aligned_cols=259 Identities=27% Similarity=0.459 Sum_probs=201.5
Q ss_pred hCCceeeeEEeecCceEEEEEEec-CCC----EEEEEEeecccc-cchHHHHHHHHHHhhccCCceeeEeeeeecCCceE
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILD-DGR----EVAVKVLKRANQ-HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRC 571 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~-~g~----~VAVK~lk~~~~-~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~ 571 (897)
.++|+..+.||+|+||.||+|.+. +|. .||+|.+..... ....++.+|+.++++++|+||++++++|... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~ 84 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ 84 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence 356778899999999999999864 444 478888865332 2234788999999999999999999998764 567
Q ss_pred EEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchh
Q 002647 572 LVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLART 651 (897)
Q Consensus 572 LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~ 651 (897)
+++||+++|+|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++.
T Consensus 85 ~v~e~~~~g~l~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dikp~Nill~~~~~~kL~Dfg~~~~ 158 (303)
T cd05110 85 LVTQLMPHGCLLDYVHEH---KDNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARL 158 (303)
T ss_pred eeehhcCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHhhcC---eeccccccceeeecCCCceEEcccccccc
Confidence 999999999999998532 346899999999999999999999887 99999999999999999999999999986
Q ss_pred cccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhccccccccc
Q 002647 652 ALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLK 730 (897)
Q Consensus 652 ~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~ 730 (897)
..............++..|+|||++.+..++.++||||||+++|||++ |+.||..... ..+..+... .....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~---~~~~~~~~~----~~~~~ 231 (303)
T cd05110 159 LEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT---REIPDLLEK----GERLP 231 (303)
T ss_pred ccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHC----CCCCC
Confidence 533222212223445778999999998899999999999999999997 9999864321 222222211 11000
Q ss_pred ccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHhh
Q 002647 731 TIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNE 780 (897)
Q Consensus 731 ~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~~e 780 (897)
........+.+++..||..+|++||++.|+++.|+.+.++
T Consensus 232 ----------~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 232 ----------QPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred ----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 0112234678899999999999999999999999876543
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-36 Score=329.08 Aligned_cols=242 Identities=24% Similarity=0.351 Sum_probs=193.1
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhcc-CCceeeEeeeeecCCceEEEE
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLH-HRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~-HpNIV~Llg~~~~~~~~~LV~ 574 (897)
+|+..+.||+|+||+||+|... +|+.||||+++... ....+.+..|..++..+. |++|+++.+++.+.+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4778899999999999999964 68999999997532 233456788999998885 577888999999888999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
||+++|+|.+++.. ...+++.+++.++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++....
T Consensus 81 Ey~~~g~L~~~i~~----~~~l~~~~~~~i~~qi~~al~~lH~~~---ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~ 153 (323)
T cd05615 81 EYVNGGDLMYHIQQ----VGKFKEPQAVFYAAEISVGLFFLHRRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMV 153 (323)
T ss_pred cCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeccccccccCC
Confidence 99999999999843 346999999999999999999999988 99999999999999999999999999875322
Q ss_pred CCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccccccccccc
Q 002647 655 EGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIID 734 (897)
Q Consensus 655 ~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiD 734 (897)
.. .......||..|+|||++.+..++.++|||||||++|||++|+.||..... ..+... +....
T Consensus 154 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~---~~~~~~---i~~~~-------- 217 (323)
T cd05615 154 DG--VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE---DELFQS---IMEHN-------- 217 (323)
T ss_pred CC--ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH---HHHHHH---HHhCC--------
Confidence 21 122345689999999999988999999999999999999999999975322 111111 11000
Q ss_pred chhccCCCHHHHHHHHHHHHHccCCCCCCCCCHH
Q 002647 735 PVIESNISYDTLVKVAAIASMCVQPEVSHRPFMG 768 (897)
Q Consensus 735 p~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~ 768 (897)
. .++......+.+++.+||+.+|.+|++..
T Consensus 218 --~--~~p~~~~~~~~~li~~~l~~~p~~R~~~~ 247 (323)
T cd05615 218 --V--SYPKSLSKEAVSICKGLMTKHPSKRLGCG 247 (323)
T ss_pred --C--CCCccCCHHHHHHHHHHcccCHhhCCCCC
Confidence 0 11122234678899999999999999853
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=328.10 Aligned_cols=255 Identities=21% Similarity=0.263 Sum_probs=195.5
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~ 574 (897)
++|.+.+.||+|+||+||+++.. +++.||+|++.... ......+.+|+.++..++|+||+++++++.+++..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47899999999999999999965 67889999987522 223345888999999999999999999999999999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 Ey~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~~L~~lH~~~---iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 154 (331)
T cd05624 81 DYYVGGDLLTLLSKF---EDRLPEDMARFYIAEMVLAIHSIHQLH---YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQ 154 (331)
T ss_pred eCCCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCchHHEEEcCCCCEEEEeccceeeccC
Confidence 999999999999632 346899999999999999999999888 99999999999999999999999999976532
Q ss_pred CCCcccccccccccccCChhhhhc-----CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccc
Q 002647 655 EGNKHISTHVMGTFGYLAPEYAMT-----GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGL 729 (897)
Q Consensus 655 ~~~~~~~t~~~GT~~Y~APE~l~~-----~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l 729 (897)
.. ........||+.|+|||++.. +.++.++|||||||+||||++|+.||...... .....+.......
T Consensus 155 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~------~~~~~i~~~~~~~ 227 (331)
T cd05624 155 DG-TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV------ETYGKIMNHEERF 227 (331)
T ss_pred CC-ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHH------HHHHHHHcCCCcc
Confidence 22 112234579999999999875 56788999999999999999999999643221 1111111100000
Q ss_pred cccccchhccCCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 002647 730 KTIIDPVIESNISYDTLVKVAAIASMCVQPEVSH--RPFMGEVVQA 773 (897)
Q Consensus 730 ~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~--RPTm~EVl~~ 773 (897)
. +. .. ..+....+.+++.+|+..++++ |+++.++++.
T Consensus 228 -~-~p----~~-~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 228 -Q-FP----SH-ITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred -c-CC----Cc-cccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 0 00 00 1122356778888988865543 4577777653
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=327.58 Aligned_cols=255 Identities=22% Similarity=0.300 Sum_probs=195.1
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~ 574 (897)
++|.+.++||+|+||+||+++.+ +++.+|+|++.... ......+.+|+.++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 47889999999999999999965 57889999986422 223345888999999999999999999999999999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
||+++|+|.+++.. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 ey~~~g~L~~~l~~---~~~~l~~~~~~~~~~qi~~al~~lH~~~---iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~ 154 (332)
T cd05623 81 DYYVGGDLLTLLSK---FEDRLPEDMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLME 154 (332)
T ss_pred eccCCCcHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEeecchheeccc
Confidence 99999999999963 2346899999999999999999999988 99999999999999999999999999875433
Q ss_pred CCCcccccccccccccCChhhhh-----cCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccc
Q 002647 655 EGNKHISTHVMGTFGYLAPEYAM-----TGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGL 729 (897)
Q Consensus 655 ~~~~~~~t~~~GT~~Y~APE~l~-----~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l 729 (897)
.. ........||+.|+|||++. ...++.++|||||||+||||++|+.||..... ......+.......
T Consensus 155 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~------~~~~~~i~~~~~~~ 227 (332)
T cd05623 155 DG-TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL------VETYGKIMNHKERF 227 (332)
T ss_pred CC-cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCH------HHHHHHHhCCCccc
Confidence 22 22223457999999999986 34678899999999999999999999964321 11111111111000
Q ss_pred cccccchhccCCCHHHHHHHHHHHHHccCCCC--CCCCCHHHHHHH
Q 002647 730 KTIIDPVIESNISYDTLVKVAAIASMCVQPEV--SHRPFMGEVVQA 773 (897)
Q Consensus 730 ~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP--~~RPTm~EVl~~ 773 (897)
. + +. ...+....+.+++.+|+..++ ..|+++.|+++.
T Consensus 228 ~--~-p~----~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 228 Q--F-PA----QVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred c--C-CC----ccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 0 0 00 011223456778888775544 346888888654
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=328.10 Aligned_cols=255 Identities=23% Similarity=0.294 Sum_probs=194.3
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecc---cccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRA---NQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~---~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~ 574 (897)
++|++.+.||+|+||+||+++.. +++.||||++... .....+.+.+|+.++..++|+||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 47899999999999999999965 6899999999742 2223456889999999999999999999999999999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
||+++|+|.+++.. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 154 (331)
T cd05597 81 DYYVGGDLLTLLSK---FEDRLPEDMARFYLAEMVLAIDSVHQLG---YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLA 154 (331)
T ss_pred ecCCCCcHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEECCCCHHHEEECCCCCEEEEECCceeecCC
Confidence 99999999999953 2346899999999999999999999988 99999999999999999999999999875433
Q ss_pred CCCcccccccccccccCChhhhhc-----CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccc
Q 002647 655 EGNKHISTHVMGTFGYLAPEYAMT-----GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGL 729 (897)
Q Consensus 655 ~~~~~~~t~~~GT~~Y~APE~l~~-----~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l 729 (897)
.. ........||+.|+|||++.. ..++.++|||||||++|||++|+.||..... ......+.......
T Consensus 155 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~------~~~~~~i~~~~~~~ 227 (331)
T cd05597 155 DG-TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL------VETYGKIMNHKEHF 227 (331)
T ss_pred CC-CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH------HHHHHHHHcCCCcc
Confidence 22 122233569999999999873 4578899999999999999999999964321 11111111111100
Q ss_pred cccccchhccCCCHHHHHHHHHHHHHccCC--CCCCCCCHHHHHHH
Q 002647 730 KTIIDPVIESNISYDTLVKVAAIASMCVQP--EVSHRPFMGEVVQA 773 (897)
Q Consensus 730 ~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~--dP~~RPTm~EVl~~ 773 (897)
.+.+ . .......+.+++.+|+.. ++..|+++.++++.
T Consensus 228 -~~~~-~-----~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 228 -QFPP-D-----VTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred -cCCC-c-----cCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 0000 0 011234556777776654 34447899888765
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=315.30 Aligned_cols=265 Identities=26% Similarity=0.312 Sum_probs=200.2
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc--ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEe
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN--QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYE 575 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~E 575 (897)
++|+..+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|++++++++|+|++++++++......++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46889999999999999999976 68999999986432 2233568899999999999999999999999999999999
Q ss_pred eccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccC
Q 002647 576 LIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655 (897)
Q Consensus 576 y~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~ 655 (897)
|++++.|..++.. ...+++.+++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 81 ~~~~~~l~~~~~~----~~~~~~~~~~~~~~ql~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07847 81 YCDHTVLNELEKN----PRGVPEHLIKKIIWQTLQAVNFCHKHN---CIHRDVKPENILITKQGQIKLCDFGFARILTGP 153 (286)
T ss_pred ccCccHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCChhhEEEcCCCcEEECccccceecCCC
Confidence 9999988887642 346899999999999999999999987 999999999999999999999999999865332
Q ss_pred CCcccccccccccccCChhhhhc-CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchh-hHHhhhhcc-------ccc
Q 002647 656 GNKHISTHVMGTFGYLAPEYAMT-GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQEN-LVAWARPLL-------TTK 726 (897)
Q Consensus 656 ~~~~~~t~~~GT~~Y~APE~l~~-~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~-lv~w~~~l~-------~~~ 726 (897)
.. ......++..|+|||++.+ ..++.++||||||+++|||++|+.||......+... ......... ...
T Consensus 154 ~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (286)
T cd07847 154 GD--DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTN 231 (286)
T ss_pred cc--cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccc
Confidence 21 1223457889999999876 457899999999999999999999997543221111 110000000 000
Q ss_pred ccccccccchhccCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 727 EGLKTIIDPVIESNIS-----YDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 727 e~l~~iiDp~l~~~~~-----~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
.....+..+......+ ......+.+++.+||+.+|++||++.|++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 232 QFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred cccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 0000000111100001 112356789999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=314.70 Aligned_cols=249 Identities=24% Similarity=0.431 Sum_probs=198.6
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccccc---------chHHHHHHHHHHhhccCCceeeEeeeeecCCc
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQH---------GGREFLAELEMLSRLHHRNLVKLFGVCIEDNN 569 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~---------~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~ 569 (897)
+|.+.+.||+|+||.||+|... +++.||+|.+...... ..+.+.+|++++++++|+||+++++++.+.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 3667789999999999999964 6889999988653322 12468899999999999999999999999999
Q ss_pred eEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcc
Q 002647 570 RCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLA 649 (897)
Q Consensus 570 ~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLA 649 (897)
.++||||+++++|.+++.. ...+++..+..++.|++.||+|||+.+ ++||||||+|||+++++.+||+|||++
T Consensus 81 ~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~~l~~~l~~lH~~~---ivH~di~p~nil~~~~~~~~l~dfg~~ 153 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNN----YGAFEETLVRNFVRQILKGLNYLHNRG---IIHRDIKGANILVDNKGGIKISDFGIS 153 (267)
T ss_pred cEEEEEecCCCCHHHHHHh----ccCccHHHHHHHHHHHHHHHHHHHhcC---cccccCCHHHEEEcCCCCEEecccCCC
Confidence 9999999999999999953 346899999999999999999999887 999999999999999999999999998
Q ss_pred hhcccCCCc----ccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccc
Q 002647 650 RTALDEGNK----HISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTT 725 (897)
Q Consensus 650 r~~~~~~~~----~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~ 725 (897)
+........ .......|+..|+|||++.+..++.++||||||+++|||++|+.||...... ..... .
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~~-------~ 224 (267)
T cd06628 154 KKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL--QAIFK-------I 224 (267)
T ss_pred cccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH--HHHHH-------H
Confidence 865422111 1112345888999999999888999999999999999999999999743211 11000 0
Q ss_pred cccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 726 KEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 726 ~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
.. ...+ ..+......+.+++.+||+.||.+||++.||++
T Consensus 225 ~~----~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 225 GE----NASP----EIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred hc----cCCC----cCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 00 0011 112233456788999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=316.75 Aligned_cols=263 Identities=23% Similarity=0.306 Sum_probs=197.3
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc--ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN--QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
+|.+.+.||+|+||.||+|+.. ++..||||+++... ....+.+.+|+.++++++|+||+++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4788899999999999999965 68999999986432 22346788999999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
++ ++|.+++.... ....+++.+++.++.|+++||+|||+.+ |+||||||+|||+++++.+||+|||++......
T Consensus 81 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~- 154 (285)
T cd07861 81 LS-MDLKKYLDSLP-KGQYMDAELVKSYLYQILQGILFCHSRR---VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIP- 154 (285)
T ss_pred CC-CCHHHHHhcCC-CCCcCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEEcCCCcEEECcccceeecCCC-
Confidence 97 68888875432 2356899999999999999999999887 999999999999999999999999998754221
Q ss_pred CcccccccccccccCChhhhhcC-CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccc----------
Q 002647 657 NKHISTHVMGTFGYLAPEYAMTG-HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTT---------- 725 (897)
Q Consensus 657 ~~~~~t~~~GT~~Y~APE~l~~~-~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~---------- 725 (897)
........++..|+|||++.+. .++.++||||||+++|||+||+.||....... .+....+.+...
T Consensus 155 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 231 (285)
T cd07861 155 -VRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEID--QLFRIFRILGTPTEDVWPGVTS 231 (285)
T ss_pred -cccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHHHHhCCCChhhhhcchh
Confidence 1122334578899999988654 56889999999999999999999997533211 111000000000
Q ss_pred ----cccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 726 ----KEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 726 ----~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
.............. .......++.+++.+||+.||++||++.||++
T Consensus 232 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 232 LPDYKNTFPKWKKGSLRS-AVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred hHHHHhhccccCcchhHH-hcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00000000000000 01112356679999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=311.77 Aligned_cols=253 Identities=27% Similarity=0.374 Sum_probs=204.3
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeec
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELI 577 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~ 577 (897)
++|++.+.||+|+||.||+|... +++.+++|.+........+.+.+|++++++++|+||+++++++..++..+++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 57899999999999999999964 57889999998765556678999999999999999999999999999999999999
Q ss_pred cCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCC
Q 002647 578 HNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN 657 (897)
Q Consensus 578 ~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~ 657 (897)
.+++|.+++... ...+++.++..++.|++.||+|||+.+ |+|+||||+||++++++.+||+|||++.......
T Consensus 83 ~~~~l~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~- 155 (262)
T cd06613 83 GGGSLQDIYQVT---RGPLSELQIAYVCRETLKGLAYLHETG---KIHRDIKGANILLTEDGDVKLADFGVSAQLTATI- 155 (262)
T ss_pred CCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCChhhEEECCCCCEEECccccchhhhhhh-
Confidence 999999988532 256999999999999999999999887 9999999999999999999999999987653321
Q ss_pred cccccccccccccCChhhhhcC---CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccccccccccc
Q 002647 658 KHISTHVMGTFGYLAPEYAMTG---HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIID 734 (897)
Q Consensus 658 ~~~~t~~~GT~~Y~APE~l~~~---~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiD 734 (897)
.......++..|+|||.+... .++.++||||||+++|||+||+.||....... ...... ..... .
T Consensus 156 -~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~--~~~~~~------~~~~~---~ 223 (262)
T cd06613 156 -AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMR--ALFLIS------KSNFP---P 223 (262)
T ss_pred -hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHH------hccCC---C
Confidence 112345688899999998776 78999999999999999999999996433211 111100 00000 0
Q ss_pred chhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 735 PVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 735 p~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
..+ .........+.+++.+||+.+|.+||++.+|+.
T Consensus 224 ~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 224 PKL--KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred ccc--cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000 012233456889999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=320.15 Aligned_cols=263 Identities=28% Similarity=0.397 Sum_probs=205.7
Q ss_pred ecHHHHHHhhCCceeeeEEeecCceEEEEEEe-cCCCEEEEEEeecccccchHHHHHHHHHHhhc-cCCceeeEeeeeec
Q 002647 489 FTLNDIEKATNGFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRANQHGGREFLAELEMLSRL-HHRNLVKLFGVCIE 566 (897)
Q Consensus 489 f~~~ei~~at~~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~ 566 (897)
+.+.++..++++|.+.+.||+|+||.||++.. .+++.+|+|++.... ....++.+|+.+++++ +|+|++++++++..
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 45566777889999999999999999999996 468899999986532 2245778899999999 89999999999875
Q ss_pred C-----CceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCce
Q 002647 567 D-----NNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTP 641 (897)
Q Consensus 567 ~-----~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~v 641 (897)
. ...++||||+++|+|.++++........+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~nili~~~~~~ 167 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR---IIHRDVKGNNILLTTEGGV 167 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCE
Confidence 3 3579999999999999988643333457899999999999999999999887 9999999999999999999
Q ss_pred EEeccCcchhcccCCCcccccccccccccCChhhhhcC-----CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhH
Q 002647 642 KVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTG-----HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLV 716 (897)
Q Consensus 642 KLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~-----~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv 716 (897)
||+|||+++....... ......|+..|+|||++... .++.++|||||||++|||++|+.||..... ...+.
T Consensus 168 kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~--~~~~~ 243 (291)
T cd06639 168 KLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP--VKTLF 243 (291)
T ss_pred EEeecccchhcccccc--cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcH--HHHHH
Confidence 9999999886432211 12234688999999987643 368899999999999999999999864321 11121
Q ss_pred HhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 717 AWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 717 ~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
.+.+. ....+.+ ..+....+.+++.+||+.+|++||++.|+++
T Consensus 244 ~~~~~------~~~~~~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 244 KIPRN------PPPTLLH-------PEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred HHhcC------CCCCCCc-------ccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 11110 0011111 1122346889999999999999999999975
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-36 Score=332.64 Aligned_cols=264 Identities=25% Similarity=0.308 Sum_probs=197.2
Q ss_pred hhCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc--ccchHHHHHHHHHHhhccCCceeeEeeeeecC------
Q 002647 497 ATNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN--QHGGREFLAELEMLSRLHHRNLVKLFGVCIED------ 567 (897)
Q Consensus 497 at~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~------ 567 (897)
..++|.+.+.||+|+||.||++... .++.||||++.... ....+.+.+|+.+++.++|+||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4578999999999999999999854 68899999987532 23346788999999999999999999988643
Q ss_pred CceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccC
Q 002647 568 NNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFG 647 (897)
Q Consensus 568 ~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFG 647 (897)
...++||||+++ +|.+.+. ..+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~------~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDikp~Nill~~~~~~kl~Dfg 164 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 164 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHh------hcCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEECCCCCEEEeeCc
Confidence 346999999975 6666663 24889999999999999999999988 9999999999999999999999999
Q ss_pred cchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhH-H---------
Q 002647 648 LARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLV-A--------- 717 (897)
Q Consensus 648 LAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv-~--------- 717 (897)
+++.... ........||..|+|||++.+..++.++|||||||++|||++|+.||...+..+....+ .
T Consensus 165 ~~~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (355)
T cd07874 165 LARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEF 241 (355)
T ss_pred ccccCCC---ccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 9975422 12223457899999999999989999999999999999999999999754321110000 0
Q ss_pred ------hhhhcccccccccccccchh--------ccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 718 ------WARPLLTTKEGLKTIIDPVI--------ESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 718 ------w~~~l~~~~e~l~~iiDp~l--------~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
....+.........+..+.. ...........+.+|+.+||+.||++|||+.|+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 242 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 00000000000000000000 000111223567899999999999999999999875
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=319.76 Aligned_cols=252 Identities=25% Similarity=0.383 Sum_probs=198.9
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccc---cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEe
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQ---HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYE 575 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~---~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~E 575 (897)
.|+..++||+|+||+||++... +++.||||.+..... ...+.+.+|+.++++++|+|++.+++.+.+++..++|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 3677899999999999999965 688999999865322 223457889999999999999999999999999999999
Q ss_pred eccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccC
Q 002647 576 LIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655 (897)
Q Consensus 576 y~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~ 655 (897)
|+++|+|.+++... ....+++.+++.++.|++.||.|||+.+ |+||||||+|||+++++.++|+|||++......
T Consensus 81 ~~~g~~L~~~l~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05630 81 LMNGGDLKFHIYHM--GEAGFEEGRAVFYAAEICCGLEDLHQER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 155 (285)
T ss_pred ecCCCcHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeccceeecCCC
Confidence 99999999988532 2245899999999999999999999887 999999999999999999999999998754322
Q ss_pred CCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccc
Q 002647 656 GNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDP 735 (897)
Q Consensus 656 ~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp 735 (897)
. ......|+..|+|||++.+..++.++||||||+++|||++|+.||............. . +++.
T Consensus 156 ~---~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~--~-----------~~~~ 219 (285)
T cd05630 156 Q---TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVE--R-----------LVKE 219 (285)
T ss_pred c---cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHH--h-----------hhhh
Confidence 1 1123468999999999999999999999999999999999999997533211111000 0 0000
Q ss_pred hhccCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 002647 736 VIESNISYDTLVKVAAIASMCVQPEVSHRPF-----MGEVVQA 773 (897)
Q Consensus 736 ~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPT-----m~EVl~~ 773 (897)
....+.......+.+|+..||+.||++||+ +.|++++
T Consensus 220 -~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 220 -VQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred -hhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 000111223345789999999999999999 7888763
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-36 Score=312.97 Aligned_cols=255 Identities=24% Similarity=0.358 Sum_probs=201.9
Q ss_pred CceeeeEEeecCceEEEEEEe-cCCCEEEEEEeeccc--ccchHHHHHHHHHHhhccCCceeeEeeeeec--CCceEEEE
Q 002647 500 GFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRAN--QHGGREFLAELEMLSRLHHRNLVKLFGVCIE--DNNRCLVY 574 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~--~~~~~LV~ 574 (897)
+|++.+.||.|+||.||++.. .++..||+|.+.... ....+.+.+|++++++++|+||+++++++.. +...+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 478889999999999999995 468899999987432 3334578899999999999999999998764 34578999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccC--CCcEEecCCCCCcEEEccCCceEEeccCcchhc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDS--SPRVIHRDFKSSNILLEHDFTPKVSDFGLARTA 652 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~g--sp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~ 652 (897)
||+++++|.+++.........+++..++.++.|+++||+|||..+ +.+|+|+||||+||++++++.+||+|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 999999999999654444567999999999999999999999332 234999999999999999999999999999865
Q ss_pred ccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccccccccc
Q 002647 653 LDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTI 732 (897)
Q Consensus 653 ~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~i 732 (897)
.... .......++..|+|||++....++.++||||||+++|+|++|+.||+... ...+...... ..
T Consensus 161 ~~~~--~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~-----~~---- 226 (265)
T cd08217 161 GHDS--SFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN---QLQLASKIKE-----GK---- 226 (265)
T ss_pred cCCc--ccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC---HHHHHHHHhc-----CC----
Confidence 3322 11234568999999999998889999999999999999999999997543 1122111110 00
Q ss_pred ccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 733 IDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 733 iDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
....+......+.+++.+|++.+|++||++.||++.
T Consensus 227 -----~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 227 -----FRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred -----CCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 011222334578899999999999999999999763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-36 Score=316.09 Aligned_cols=252 Identities=25% Similarity=0.373 Sum_probs=199.2
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeec
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELI 577 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~ 577 (897)
++|.+.+.||+|+||.||+|... +++.||+|.++.........+.+|+.+++.++|+||+++++++...+..++||||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 46777889999999999999964 68899999987655444567889999999999999999999999999999999999
Q ss_pred cCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCC
Q 002647 578 HNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN 657 (897)
Q Consensus 578 ~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~ 657 (897)
++++|.+++.. .+.+++.+++.++.|++.||.|||+.+ |+|+||||+||+++.++.+||+|||++......
T Consensus 89 ~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~-- 159 (267)
T cd06645 89 GGGSLQDIYHV----TGPLSESQIAYVSRETLQGLYYLHSKG---KMHRDIKGANILLTDNGHVKLADFGVSAQITAT-- 159 (267)
T ss_pred CCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECcceeeeEccCc--
Confidence 99999999853 346899999999999999999999988 999999999999999999999999998754321
Q ss_pred cccccccccccccCChhhhh---cCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccccccccccc
Q 002647 658 KHISTHVMGTFGYLAPEYAM---TGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIID 734 (897)
Q Consensus 658 ~~~~t~~~GT~~Y~APE~l~---~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiD 734 (897)
........|+..|+|||++. ...++.++|||||||++|||++|+.||....... .+..... .. ...
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~--~~~~~~~------~~---~~~ 228 (267)
T cd06645 160 IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR--ALFLMTK------SN---FQP 228 (267)
T ss_pred ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchh--hHHhhhc------cC---CCC
Confidence 11223456899999999874 4567889999999999999999999985432211 1110000 00 000
Q ss_pred chhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 735 PVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 735 p~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
+..... ......+.+++.+|++.+|++||++.||++
T Consensus 229 ~~~~~~--~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 229 PKLKDK--MKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred Cccccc--CCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 001100 012245778999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=316.06 Aligned_cols=239 Identities=25% Similarity=0.451 Sum_probs=188.8
Q ss_pred eEEeecCceEEEEEEecC-------------CCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceE
Q 002647 505 RIIGEGGFGVVYRGILDD-------------GREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRC 571 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~~-------------g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~ 571 (897)
+.||+|+||.||+|++.+ ...|++|.+..........|.+|+.++++++||||+++++++..+...+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 368999999999998542 2258999887655555567899999999999999999999999988999
Q ss_pred EEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCc-------eEEe
Q 002647 572 LVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFT-------PKVS 644 (897)
Q Consensus 572 LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~-------vKLs 644 (897)
+||||+++|+|..++.. ....+++..+++++.||++||+|||+.+ |+||||||+|||++.++. +|++
T Consensus 81 lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~~~~~~~~~l~ 154 (262)
T cd05077 81 MVEEFVEFGPLDLFMHR---KSDVLTTPWKFKVAKQLASALSYLEDKD---LVHGNVCTKNILLAREGIDGECGPFIKLS 154 (262)
T ss_pred EEEecccCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhhhCC---eECCCCCcccEEEecCCccCCCCceeEeC
Confidence 99999999999988853 2346899999999999999999999887 999999999999987664 8999
Q ss_pred ccCcchhcccCCCcccccccccccccCChhhhh-cCCCCccccEEechhHHHHHH-hCCCCCCCCCCCCchhhHHhhhhc
Q 002647 645 DFGLARTALDEGNKHISTHVMGTFGYLAPEYAM-TGHLLVKSDVYSYGVVLLELL-TGRKPVDLSQPPGQENLVAWARPL 722 (897)
Q Consensus 645 DFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~-~~~~t~kSDVwSfGvIL~ELl-TGk~Pfd~~~~~~~~~lv~w~~~l 722 (897)
|||++...... ....++..|+|||++. ...++.++|||||||++|||+ +|+.|+......+....
T Consensus 155 d~g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~------- 221 (262)
T cd05077 155 DPGIPITVLSR------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERF------- 221 (262)
T ss_pred CCCCCccccCc------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHH-------
Confidence 99998754221 2345788999999887 466889999999999999998 58888754321111100
Q ss_pred ccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002647 723 LTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL 774 (897)
Q Consensus 723 ~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L 774 (897)
.. . .... .......+.+|+.+||+.||++||++.||++.|
T Consensus 222 ~~--~-~~~~---------~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 222 YE--G-QCML---------VTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred Hh--c-CccC---------CCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 00 0 0000 111234678999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-36 Score=319.46 Aligned_cols=250 Identities=25% Similarity=0.394 Sum_probs=198.3
Q ss_pred ceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccC
Q 002647 501 FHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHN 579 (897)
Q Consensus 501 y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~g 579 (897)
|++.+.||+|+||.||+|... ++..+++|.+........+.+.+|+++++.++|+||+++++++..++..++||||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 566788999999999999965 5778899998765555567889999999999999999999999999999999999999
Q ss_pred CccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcc
Q 002647 580 GSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH 659 (897)
Q Consensus 580 GSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~ 659 (897)
|+|..++.. ....+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||++...... ..
T Consensus 87 ~~l~~~~~~---~~~~l~~~~~~~~~~qi~~~L~~LH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~--~~ 158 (282)
T cd06643 87 GAVDAVMLE---LERPLTEPQIRVVCKQTLEALNYLHENK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT--IQ 158 (282)
T ss_pred CcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEccCCCEEEcccccccccccc--cc
Confidence 999988753 2356999999999999999999999987 999999999999999999999999998754321 11
Q ss_pred cccccccccccCChhhhh-----cCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccccccccccc
Q 002647 660 ISTHVMGTFGYLAPEYAM-----TGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIID 734 (897)
Q Consensus 660 ~~t~~~GT~~Y~APE~l~-----~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiD 734 (897)
......++..|+|||++. ...++.++|||||||++|||++|+.||...... ......... ....+.
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--~~~~~~~~~------~~~~~~- 229 (282)
T cd06643 159 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPM--RVLLKIAKS------EPPTLA- 229 (282)
T ss_pred ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHH--HHHHHHhhc------CCCCCC-
Confidence 223456889999999974 345778999999999999999999998643211 111111100 000000
Q ss_pred chhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 735 PVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 735 p~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
.+......+.+++.+||+.||.+||++.++++.
T Consensus 230 ------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 230 ------QPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred ------CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111223467899999999999999999998653
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-36 Score=324.18 Aligned_cols=265 Identities=22% Similarity=0.325 Sum_probs=198.1
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc-ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
++|.+.+.||+|+||+||+|+.+ +++.||+|.++... ......+.+|++++++++|+||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 56889999999999999999965 67889999987543 22335688999999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
+++ +|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 86 ~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 158 (309)
T cd07872 86 LDK-DLKQYMDDC---GNIMSMHNVKIFLYQILRGLAYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSVPT 158 (309)
T ss_pred CCC-CHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECccccceecCCCc
Confidence 975 888877532 345889999999999999999999887 9999999999999999999999999987542221
Q ss_pred CcccccccccccccCChhhhhc-CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhh--------hhcccccc
Q 002647 657 NKHISTHVMGTFGYLAPEYAMT-GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWA--------RPLLTTKE 727 (897)
Q Consensus 657 ~~~~~t~~~GT~~Y~APE~l~~-~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~--------~~l~~~~e 727 (897)
.......++..|+|||++.+ ..++.++|||||||++|||+||+.||......+....+... +.......
T Consensus 159 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
T cd07872 159 --KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSND 236 (309)
T ss_pred --cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchh
Confidence 12233467899999998865 46789999999999999999999999754432211111100 00000000
Q ss_pred cccccccchhcc----CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 728 GLKTIIDPVIES----NISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 728 ~l~~iiDp~l~~----~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
.....-.+.... .........+.+++.+|++.||.+|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 237 EFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 000000000000 000112345778999999999999999999976
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-36 Score=317.15 Aligned_cols=254 Identities=24% Similarity=0.405 Sum_probs=200.2
Q ss_pred CceeeeEEeecCceEEEEEEecC--CCEEEEEEeeccc----------ccchHHHHHHHHHHhh-ccCCceeeEeeeeec
Q 002647 500 GFHTSRIIGEGGFGVVYRGILDD--GREVAVKVLKRAN----------QHGGREFLAELEMLSR-LHHRNLVKLFGVCIE 566 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~~--g~~VAVK~lk~~~----------~~~~~~f~~Ev~iL~~-L~HpNIV~Llg~~~~ 566 (897)
+|++.+.||+|+||.||+|.... ++.+|||.+.... .....++.+|+.++.+ ++|+||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47778899999999999999764 6889999885321 1223457789988875 799999999999999
Q ss_pred CCceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhc-cCCCcEEecCCCCCcEEEccCCceEEec
Q 002647 567 DNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHE-DSSPRVIHRDFKSSNILLEHDFTPKVSD 645 (897)
Q Consensus 567 ~~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~-~gsp~IIHrDIKpsNILLd~~~~vKLsD 645 (897)
++..++||||+++++|.+++.........+++..+++++.|++.||.|||+ .+ |+|+|||++|||++.++.+||+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~---i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR---IVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc---eeecCCCHHHEEECCCCcEEEec
Confidence 999999999999999999885433334579999999999999999999996 45 99999999999999999999999
Q ss_pred cCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccc
Q 002647 646 FGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTT 725 (897)
Q Consensus 646 FGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~ 725 (897)
||++....... ......|+..|++||++.+..++.++||||||+++|||++|+.||...... ........
T Consensus 158 fg~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~------~~~~~~~~- 227 (269)
T cd08528 158 FGLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML------SLATKIVE- 227 (269)
T ss_pred ccceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH------HHHHHHhh-
Confidence 99997643322 233456889999999999888999999999999999999999998643211 11111100
Q ss_pred cccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 002647 726 KEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775 (897)
Q Consensus 726 ~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~ 775 (897)
.... +.. .......+.+++.+||+.||++||++.||..+++
T Consensus 228 -~~~~----~~~----~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 228 -AVYE----PLP----EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred -ccCC----cCC----cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 0000 000 0112356788999999999999999999998875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=321.98 Aligned_cols=250 Identities=25% Similarity=0.370 Sum_probs=203.6
Q ss_pred hCCceeeeEEeecCceEEEEEEe-cCCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
..+|.+.+.||+|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++|+||+++++++..++..++||||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence 36788999999999999999995 47899999999866555567789999999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
+++++|.+++.. ..+++.+++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 98 ~~~~~L~~~~~~-----~~~~~~~~~~~~~~l~~~L~~LH~~~---i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~ 169 (297)
T cd06656 98 LAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALDFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (297)
T ss_pred cCCCCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEECcCccceEccCCc
Confidence 999999999842 35889999999999999999999887 9999999999999999999999999987543221
Q ss_pred CcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccch
Q 002647 657 NKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPV 736 (897)
Q Consensus 657 ~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~ 736 (897)
.......++..|+|||.+.+..++.++|||||||++|+|++|+.||...+....... .. ......+
T Consensus 170 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~------~~--~~~~~~~---- 235 (297)
T cd06656 170 --SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL------IA--TNGTPEL---- 235 (297)
T ss_pred --cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheee------ec--cCCCCCC----
Confidence 122345688999999999988899999999999999999999999964332111000 00 0000000
Q ss_pred hccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 737 IESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 737 l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
..+......+.+++.+||+.+|++||++.||++
T Consensus 236 ---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 236 ---QNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred ---CCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 011222345778999999999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=336.16 Aligned_cols=263 Identities=21% Similarity=0.298 Sum_probs=199.6
Q ss_pred hCCceeeeEEeecCceEEEEEEec---CCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEE
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILD---DGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~---~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~ 574 (897)
..+|.+.+.||+|+||.||++... .+..||||.+... ..+.+|+++|++|+|+||+++++++......++||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 457999999999999999999853 3578999988643 34568999999999999999999999989999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
||+. ++|.+++. ....+++.+++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 166 e~~~-~~l~~~l~----~~~~l~~~~~~~i~~ql~~aL~~LH~~g---ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~ 237 (392)
T PHA03207 166 PKYK-CDLFTYVD----RSGPLPLEQAITIQRRLLEALAYLHGRG---IIHRDVKTENIFLDEPENAVLGDFGAACKLDA 237 (392)
T ss_pred hhcC-CCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEccCccccccCc
Confidence 9995 68888883 2357999999999999999999999988 99999999999999999999999999976543
Q ss_pred CCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchh-hHHhhhhcccc-----ccc
Q 002647 655 EGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQEN-LVAWARPLLTT-----KEG 728 (897)
Q Consensus 655 ~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~-lv~w~~~l~~~-----~e~ 728 (897)
...........||..|+|||++....++.++|||||||++|||++|+.||.......... +..-.+.+... ...
T Consensus 238 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~ 317 (392)
T PHA03207 238 HPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNG 317 (392)
T ss_pred ccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCcc
Confidence 333233335679999999999999999999999999999999999999997654332111 11100000000 000
Q ss_pred cccc------ccchhccCCC-------HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 729 LKTI------IDPVIESNIS-------YDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 729 l~~i------iDp~l~~~~~-------~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
...+ ........+. ......+.+++.+||..||++||++.|++..
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 318 STNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred chhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000 0000000000 0112456789999999999999999999765
|
|
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-36 Score=316.89 Aligned_cols=257 Identities=25% Similarity=0.411 Sum_probs=202.4
Q ss_pred CCceeeeEEeecCceEEEEEEec------CCCEEEEEEeeccccc-chHHHHHHHHHHhhccCCceeeEeeeeecCCceE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD------DGREVAVKVLKRANQH-GGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRC 571 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~------~g~~VAVK~lk~~~~~-~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~ 571 (897)
++|...+.||+|+||+||+|+.+ +...|++|.+...... ..+++.+|++++++++|+||+++++++.+....+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 46888899999999999999964 2467999988754433 4467999999999999999999999999988999
Q ss_pred EEEeeccCCccccccccCCCC-----CCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEecc
Q 002647 572 LVYELIHNGSLESHLHGDDKV-----NGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDF 646 (897)
Q Consensus 572 LV~Ey~~gGSL~~~L~~~~~~-----~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDF 646 (897)
+||||+++|+|.+++...... ...+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.++|+||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR---FVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC---cccCcCccceEEEeCCCcEEEccc
Confidence 999999999999999643311 126899999999999999999999888 999999999999999999999999
Q ss_pred CcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccc
Q 002647 647 GLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTT 725 (897)
Q Consensus 647 GLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~ 725 (897)
|+++...... ........++..|+|||.+.+...+.++||||||+++|||++ |..||..... ...+.....
T Consensus 162 ~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~---~~~~~~~~~---- 233 (275)
T cd05046 162 SLSKDVYNSE-YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD---EEVLNRLQA---- 233 (275)
T ss_pred ccccccCccc-ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch---HHHHHHHHc----
Confidence 9987543221 112223456778999999988888999999999999999999 7888853221 112111110
Q ss_pred cccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 002647 726 KEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775 (897)
Q Consensus 726 ~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~ 775 (897)
.... . .........+.+++.+||+.+|.+||++.|+++.|+
T Consensus 234 -~~~~-~-------~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 234 -GKLE-L-------PVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred -CCcC-C-------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 0000 0 011123356889999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=340.51 Aligned_cols=251 Identities=25% Similarity=0.382 Sum_probs=211.3
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc--ccchHHHHHHHHHHhhccCCceeeEeeeeecCCc-eEEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN--QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNN-RCLVY 574 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~-~~LV~ 574 (897)
++|..++++|+|+||.++.++.+ ++..+++|.+.... +...+...+|+.++++++|||||.+.+.|.+++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 56888999999999999999965 67899999987543 3334578899999999999999999999999988 89999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
+||+||+|.+.|...+ ...++++.+.+++.|++.|+.|||++. |+|||||+.|||++.+..|||+|||+|+....
T Consensus 84 ~Y~eGg~l~~~i~~~k--~~~f~E~~i~~~~~Q~~~av~ylH~~~---iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~ 158 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQK--GVLFPEERILKWFVQILLAVNYLHENR---VLHRDLKCANIFLTKDKKVKLGDFGLAKILNP 158 (426)
T ss_pred eecCCCCHHHHHHHHh--hccccHHHHHHHHHHHHHHHHHHHhhh---hhcccchhhhhhccccCceeecchhhhhhcCC
Confidence 9999999999997543 456899999999999999999999776 99999999999999999999999999998644
Q ss_pred CCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccccccccccc
Q 002647 655 EGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIID 734 (897)
Q Consensus 655 ~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiD 734 (897)
.. .....+.||+.||.||.+.+.+|..|+|||||||++|||++-+.+|...+... ++. .+ .+.++
T Consensus 159 ~~--~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~---Li~---ki------~~~~~- 223 (426)
T KOG0589|consen 159 ED--SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSE---LIL---KI------NRGLY- 223 (426)
T ss_pred ch--hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHH---HHH---HH------hhccC-
Confidence 32 24567899999999999999999999999999999999999999997654321 111 00 01111
Q ss_pred chhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 735 PVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 735 p~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
...+.....++..++..|++.+|..||++.+++..
T Consensus 224 ----~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 224 ----SPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred ----CCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 22344556778899999999999999999999887
|
|
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=315.80 Aligned_cols=257 Identities=26% Similarity=0.422 Sum_probs=198.9
Q ss_pred ceeeeEEeecCceEEEEEEec----CCCEEEEEEeeccc--ccchHHHHHHHHHHhhccCCceeeEeeeeecCC------
Q 002647 501 FHTSRIIGEGGFGVVYRGILD----DGREVAVKVLKRAN--QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDN------ 568 (897)
Q Consensus 501 y~~~~~LG~G~fGtVyka~l~----~g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~------ 568 (897)
|.+.++||+|+||+||+|.+. ++..||||+++... ....+++.+|+++|++++|+||+++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 456789999999999999853 36889999987532 234567899999999999999999999886532
Q ss_pred ceEEEEeeccCCccccccccCC--CCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEecc
Q 002647 569 NRCLVYELIHNGSLESHLHGDD--KVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDF 646 (897)
Q Consensus 569 ~~~LV~Ey~~gGSL~~~L~~~~--~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDF 646 (897)
..++++||+.+|+|.+++.... .....+++..+++++.|++.||+|||+.+ |+||||||+|||++.++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN---FIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccchhhEEEcCCCCEEECcc
Confidence 2378899999999988875322 11235889999999999999999999887 999999999999999999999999
Q ss_pred CcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccc
Q 002647 647 GLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTT 725 (897)
Q Consensus 647 GLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~ 725 (897)
|+++...............++..|++||.+....++.++||||||+++|||++ |+.||..... .++..+...
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~---~~~~~~~~~---- 230 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN---SEIYNYLIK---- 230 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH---HHHHHHHHc----
Confidence 99986533222222223445678999999998889999999999999999999 8888864322 222222111
Q ss_pred cccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 002647 726 KEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLV 777 (897)
Q Consensus 726 ~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l 777 (897)
..... ........+.+++.+||+.+|++||++.|+++.|+.+
T Consensus 231 ~~~~~----------~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 231 GNRLK----------QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CCcCC----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00000 1112335788999999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=311.29 Aligned_cols=251 Identities=24% Similarity=0.385 Sum_probs=202.9
Q ss_pred CceeeeEEeecCceEEEEEEe-cCCCEEEEEEeecc--cccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 500 GFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRA--NQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~--~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
+|+..+.||+|+||.||.+.. .+++.+++|.+... .....+++.+|++++++++|+||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 488899999999999999985 46889999998643 234456789999999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
+++|+|.+++.... ...+++.++..++.|+++||+|||+.+ ++|+||||+||++++++.+||+|||++.......
T Consensus 81 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 81 ANGGTLYDKIVRQK--GQLFEEEMVLWYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY 155 (256)
T ss_pred cCCCcHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChHhEEEeCCCCEEECcCcceEEccccc
Confidence 99999999996432 346899999999999999999999887 9999999999999999999999999987653322
Q ss_pred CcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccch
Q 002647 657 NKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPV 736 (897)
Q Consensus 657 ~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~ 736 (897)
. ......++..|+|||++.+..++.++||||||+++|||++|+.||+..... ... ..... .....
T Consensus 156 ~--~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~---~~~---~~~~~--~~~~~----- 220 (256)
T cd08221 156 S--MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL---NLV---VKIVQ--GNYTP----- 220 (256)
T ss_pred c--cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHH---HHH---HHHHc--CCCCC-----
Confidence 1 223456899999999998888899999999999999999999999643221 111 11110 00000
Q ss_pred hccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002647 737 IESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL 774 (897)
Q Consensus 737 l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L 774 (897)
........+.+++.+||+.+|++||++.|+++.+
T Consensus 221 ----~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 221 ----VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred ----CccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 1112235678899999999999999999998753
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=310.43 Aligned_cols=249 Identities=22% Similarity=0.347 Sum_probs=199.2
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc--ccchHHHHHHHHHHhhccCCceeeEeeeeecC-CceEEEEe
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN--QHGGREFLAELEMLSRLHHRNLVKLFGVCIED-NNRCLVYE 575 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~-~~~~LV~E 575 (897)
+|++.+.||+|++|.||++... +++.||+|.+.... ....+.+.+|++++++++|+|++++++.+... ...++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 5889999999999999999965 57889999986532 23345788999999999999999999987644 45789999
Q ss_pred eccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccC
Q 002647 576 LIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655 (897)
Q Consensus 576 y~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~ 655 (897)
|+++++|.+++... ....+++.+++.++.|++.||+|||+.+ |+||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~l~~~l~~~--~~~~l~~~~~~~~~~~l~~~l~~lH~~~---i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~ 155 (257)
T cd08223 81 FCEGGDLYHKLKEQ--KGKLLPENQVVEWFVQIAMALQYLHEKH---ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ 155 (257)
T ss_pred ccCCCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCchhEEEecCCcEEEecccceEEeccc
Confidence 99999999999642 2346899999999999999999999988 999999999999999999999999998765322
Q ss_pred CCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccc
Q 002647 656 GNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDP 735 (897)
Q Consensus 656 ~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp 735 (897)
. .......++..|+|||++.+..++.++||||||++++||++|+.||+..+. ..+...... ..+.
T Consensus 156 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~------~~~~~~~~~--~~~~----- 220 (257)
T cd08223 156 C--DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM------NSLVYRIIE--GKLP----- 220 (257)
T ss_pred C--CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH------HHHHHHHHh--cCCC-----
Confidence 1 222345688999999999999999999999999999999999999864321 111111110 0010
Q ss_pred hhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 736 VIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 736 ~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
..+......+.+++.+|++.||++||++.|+++
T Consensus 221 ----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 221 ----PMPKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred ----CCccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 111223356889999999999999999999975
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=311.47 Aligned_cols=247 Identities=28% Similarity=0.455 Sum_probs=199.5
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc-----ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEE
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN-----QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLV 573 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~-----~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV 573 (897)
+|+..+.||+|+||+||+|... +++.|++|.+.... ....+.+.+|++++++++|+||+++++++..+...++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 3667789999999999999976 78999999986533 22346789999999999999999999999999999999
Q ss_pred EeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcc
Q 002647 574 YELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTAL 653 (897)
Q Consensus 574 ~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~ 653 (897)
|||+++++|.+++.. ...+++..+..++.|+++||+|||+.+ |+|+||+|+||+++.++.+||+|||++....
T Consensus 81 ~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~ 153 (258)
T cd06632 81 LELVPGGSLAKLLKK----YGSFPEPVIRLYTRQILLGLEYLHDRN---TVHRDIKGANILVDTNGVVKLADFGMAKQVV 153 (258)
T ss_pred EEecCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccceecc
Confidence 999999999999853 346899999999999999999999888 9999999999999999999999999987643
Q ss_pred cCCCcccccccccccccCChhhhhcCC-CCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccccccccc
Q 002647 654 DEGNKHISTHVMGTFGYLAPEYAMTGH-LLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTI 732 (897)
Q Consensus 654 ~~~~~~~~t~~~GT~~Y~APE~l~~~~-~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~i 732 (897)
... ......|+..|++||.+.... ++.++||||||+++|+|++|+.||..... ......+.. . ....
T Consensus 154 ~~~---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~--~~~~~~~~~----~-~~~~-- 221 (258)
T cd06632 154 EFS---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG--VAAVFKIGR----S-KELP-- 221 (258)
T ss_pred ccc---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH--HHHHHHHHh----c-ccCC--
Confidence 322 223456889999999988776 89999999999999999999999964331 111111100 0 0000
Q ss_pred ccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 733 IDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 733 iDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
..+......+.+++.+||+.+|++||++.|+++
T Consensus 222 -------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 222 -------PIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred -------CcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 112223356778999999999999999999875
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=343.39 Aligned_cols=263 Identities=21% Similarity=0.259 Sum_probs=196.6
Q ss_pred hCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
..+|.+.+.||+|+||.||+|... .++.||||.... ..+.+|+++|++|+|+|||++++++..++..++|||+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 457999999999999999999965 578899996432 3467899999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
+. ++|.+++.. ....+++.+++.|+.||++||+|||+.+ |+||||||+||||+.++.+||+|||+++......
T Consensus 242 ~~-~~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~ 314 (461)
T PHA03211 242 YR-SDLYTYLGA---RLRPLGLAQVTAVARQLLSAIDYIHGEG---IIHRDIKTENVLVNGPEDICLGDFGAACFARGSW 314 (461)
T ss_pred cC-CCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCC---EEECcCCHHHEEECCCCCEEEcccCCceeccccc
Confidence 95 688888853 2346999999999999999999999988 9999999999999999999999999998653322
Q ss_pred CcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCC-C----chhhHHhhhhcccccccccc
Q 002647 657 NKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPP-G----QENLVAWARPLLTTKEGLKT 731 (897)
Q Consensus 657 ~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~-~----~~~lv~w~~~l~~~~e~l~~ 731 (897)
.........||..|+|||++.+..++.++|||||||+||||++|..++...... . ...+....+...........
T Consensus 315 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~ 394 (461)
T PHA03211 315 STPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQ 394 (461)
T ss_pred ccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCC
Confidence 222233467999999999999999999999999999999999988765322211 1 11111111110000000000
Q ss_pred cccchh------------ccCCC-------HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 732 IIDPVI------------ESNIS-------YDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 732 iiDp~l------------~~~~~-------~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
.....+ ..... ......+.+|+.+||+.||.+|||+.|+++.
T Consensus 395 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 395 HAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred CcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 000000 00000 0112357789999999999999999999864
|
|
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-36 Score=319.97 Aligned_cols=238 Identities=26% Similarity=0.429 Sum_probs=187.5
Q ss_pred EEeecCceEEEEEEecC-------------------------CCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeE
Q 002647 506 IIGEGGFGVVYRGILDD-------------------------GREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKL 560 (897)
Q Consensus 506 ~LG~G~fGtVyka~l~~-------------------------g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~L 560 (897)
.||+|+||.||+|.+.. ...||+|++.........+|.+|++++++++|+||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 59999999999998521 13489999876544445678999999999999999999
Q ss_pred eeeeecCCceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCC-
Q 002647 561 FGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDF- 639 (897)
Q Consensus 561 lg~~~~~~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~- 639 (897)
+++|.+....++||||+++|+|..++.. ....+++..+++++.||++||+|||+.+ |+||||||+|||++.++
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~Nill~~~~~ 155 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRK---EKGRVPVAWKITVAQQLASALSYLEDKN---LVHGNVCAKNILLARLGL 155 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHcCC---ccCCCCCcccEEEeccCc
Confidence 9999999999999999999999999853 2356899999999999999999999887 99999999999997643
Q ss_pred ------ceEEeccCcchhcccCCCcccccccccccccCChhhhhc-CCCCccccEEechhHHHHHH-hCCCCCCCCCCCC
Q 002647 640 ------TPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMT-GHLLVKSDVYSYGVVLLELL-TGRKPVDLSQPPG 711 (897)
Q Consensus 640 ------~vKLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~-~~~t~kSDVwSfGvIL~ELl-TGk~Pfd~~~~~~ 711 (897)
.+|++|||++...... ....++..|+|||++.+ ..++.++||||||+++|||+ +|+.||.......
T Consensus 156 ~~~~~~~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~ 229 (274)
T cd05076 156 AEGTSPFIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE 229 (274)
T ss_pred ccCccceeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH
Confidence 3899999998643221 12356788999998875 56789999999999999995 6999986543221
Q ss_pred chhhHHhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002647 712 QENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL 774 (897)
Q Consensus 712 ~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L 774 (897)
..... . .... .+......+.+++.+||+.+|++||++.+|++.|
T Consensus 230 ~~~~~---~----~~~~------------~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 230 KERFY---E----KKHR------------LPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred HHHHH---H----hccC------------CCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 11110 0 0000 0111123578899999999999999999998876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=315.31 Aligned_cols=247 Identities=26% Similarity=0.400 Sum_probs=201.6
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc-ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeec
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELI 577 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~ 577 (897)
.|+..+.||+|+||.||+|... ++..||+|.++... ......+.+|++++++++|+||+++++++.+++..++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 4666788999999999999965 58899999987533 334467899999999999999999999999999999999999
Q ss_pred cCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCC
Q 002647 578 HNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN 657 (897)
Q Consensus 578 ~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~ 657 (897)
++|+|.+++.. ..+++.++..++.|++.||+|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 85 ~~~~L~~~i~~-----~~l~~~~~~~~~~~l~~~l~~lh~~~---ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~- 155 (277)
T cd06640 85 GGGSALDLLRA-----GPFDEFQIATMLKEILKGLDYLHSEK---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ- 155 (277)
T ss_pred CCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCcCCChhhEEEcCCCCEEEcccccceeccCCc-
Confidence 99999999852 35889999999999999999999887 9999999999999999999999999997653221
Q ss_pred cccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchh
Q 002647 658 KHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVI 737 (897)
Q Consensus 658 ~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l 737 (897)
.......++..|+|||++.+..++.++||||||+++|||+||+.||........... +....
T Consensus 156 -~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~-----------------~~~~~ 217 (277)
T cd06640 156 -IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFL-----------------IPKNN 217 (277)
T ss_pred -cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhh-----------------hhcCC
Confidence 122334678899999999888899999999999999999999999864332111000 00000
Q ss_pred ccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 738 ESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 738 ~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
...........+.+++.+||+.+|++||++.|+++.
T Consensus 218 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 218 PPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred CCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 112233455678899999999999999999999776
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=319.43 Aligned_cols=252 Identities=23% Similarity=0.358 Sum_probs=200.6
Q ss_pred hCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
.++|++.++||+|+||.||+|... ++..||+|.+........+++.+|++++++++|+||+++++++..++..++||||
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 90 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEF 90 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEec
Confidence 356888999999999999999965 5889999999876655567899999999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
+++++|..++... ...+++..+..++.|++.+|+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 91 ~~~~~l~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~- 163 (292)
T cd06644 91 CPGGAVDAIMLEL---DRGLTEPQIQVICRQMLEALQYLHSMK---IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT- 163 (292)
T ss_pred CCCCcHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhcCC---eeecCCCcceEEEcCCCCEEEccCccceecccc-
Confidence 9999998887532 346899999999999999999999887 999999999999999999999999998753221
Q ss_pred CcccccccccccccCChhhhh-----cCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccc
Q 002647 657 NKHISTHVMGTFGYLAPEYAM-----TGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKT 731 (897)
Q Consensus 657 ~~~~~t~~~GT~~Y~APE~l~-----~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~ 731 (897)
........++..|+|||++. ...++.++|||||||++|||++|+.||...... ..+..+ .... ...
T Consensus 164 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--~~~~~~----~~~~--~~~ 234 (292)
T cd06644 164 -LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM--RVLLKI----AKSE--PPT 234 (292)
T ss_pred -ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH--HHHHHH----hcCC--Ccc
Confidence 11223456888999999885 345678999999999999999999998643211 111111 0000 000
Q ss_pred cccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 732 IIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 732 iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
+. .+......+.+++.+||+.+|++||++.||++
T Consensus 235 ~~-------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 235 LS-------QPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred CC-------CCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 00 11122346788999999999999999999975
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-36 Score=318.10 Aligned_cols=246 Identities=26% Similarity=0.425 Sum_probs=198.6
Q ss_pred ceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc-ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeecc
Q 002647 501 FHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIH 578 (897)
Q Consensus 501 y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~ 578 (897)
|+..+.||+|+||.||+|... ++..||+|.++... ....+.+.+|++++++++|+||+++++++..++..++||||++
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG 85 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence 556678999999999999864 57889999987432 3334678899999999999999999999999999999999999
Q ss_pred CCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCc
Q 002647 579 NGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNK 658 (897)
Q Consensus 579 gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~ 658 (897)
+++|.+++.. ..+++..+..++.|+++||.|||+.+ ++|+||+|+||++++++.+||+|||++.......
T Consensus 86 ~~~L~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~---ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~-- 155 (277)
T cd06642 86 GGSALDLLKP-----GPLEETYIATILREILKGLDYLHSER---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-- 155 (277)
T ss_pred CCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhcCC---eeccCCChheEEEeCCCCEEEccccccccccCcc--
Confidence 9999998842 45899999999999999999999887 9999999999999999999999999987643221
Q ss_pred ccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhc
Q 002647 659 HISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIE 738 (897)
Q Consensus 659 ~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~ 738 (897)
.......++..|+|||++.+..++.++||||||+++|||++|+.|+....... ...+ .. .. ..+
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~---~~~~---~~---~~----~~~--- 219 (277)
T cd06642 156 IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR---VLFL---IP---KN----SPP--- 219 (277)
T ss_pred hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh---HHhh---hh---cC----CCC---
Confidence 12223467889999999998889999999999999999999999986432211 1100 00 00 001
Q ss_pred cCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 739 SNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 739 ~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
.........+.+++.+||+.+|++||++.||++.
T Consensus 220 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 220 -TLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred -CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 1122334567899999999999999999999984
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=313.41 Aligned_cols=250 Identities=24% Similarity=0.391 Sum_probs=193.3
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccc-----cchHHHHHHHHHHhhccCCceeeEeeeeecC--Cce
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQ-----HGGREFLAELEMLSRLHHRNLVKLFGVCIED--NNR 570 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~-----~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~--~~~ 570 (897)
.+|...+.||+|+||.||+|... ++..||+|++..... ...+.+.+|++++++++|+||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 47888999999999999999964 689999999864321 2234688899999999999999999988753 567
Q ss_pred EEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcch
Q 002647 571 CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR 650 (897)
Q Consensus 571 ~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr 650 (897)
++++||+++++|.+++.. ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 82 ~l~~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~LH~~~---i~H~~l~p~nil~~~~~~~~l~dfg~~~ 154 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKA----YGALTESVTRKYTRQILEGMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASK 154 (266)
T ss_pred EEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCCCcc
Confidence 899999999999999853 345899999999999999999999887 9999999999999999999999999987
Q ss_pred hcccCCC-cccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccc
Q 002647 651 TALDEGN-KHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGL 729 (897)
Q Consensus 651 ~~~~~~~-~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l 729 (897)
....... ........++..|+|||++.+..++.++|||||||++|||++|+.||...... ... ..... ..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~--~~~----~~~~~--~~- 225 (266)
T cd06651 155 RLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM--AAI----FKIAT--QP- 225 (266)
T ss_pred ccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchH--HHH----HHHhc--CC-
Confidence 5432111 11112345889999999999888999999999999999999999999643211 000 00000 00
Q ss_pred cccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 730 KTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 730 ~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
..+ .++......+..++ .||..+|++||+++||++
T Consensus 226 ---~~~----~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 226 ---TNP----QLPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred ---CCC----CCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 011 11222223455566 688899999999999975
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=314.44 Aligned_cols=253 Identities=26% Similarity=0.390 Sum_probs=194.7
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccc-cchHHHHHHHHH-HhhccCCceeeEeeeeecCCceEEEEe
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQ-HGGREFLAELEM-LSRLHHRNLVKLFGVCIEDNNRCLVYE 575 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~-~~~~~f~~Ev~i-L~~L~HpNIV~Llg~~~~~~~~~LV~E 575 (897)
++|++.+.||+|+||.||+|+.. +|+.||+|+++.... ....++..|+.+ ++.++|+||+++++++..++..++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 47889999999999999999965 689999999875432 233456667765 566799999999999999999999999
Q ss_pred eccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhcc-CCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 576 LIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHED-SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 576 y~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~-gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
|++ |+|.+++.........+++..++.++.||+.||+|||++ + ++||||||+|||++.++.+||+|||+++....
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~---i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS---VIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 996 688887754333345799999999999999999999986 5 99999999999999999999999999886532
Q ss_pred CCCcccccccccccccCChhhhhc----CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccccccc
Q 002647 655 EGNKHISTHVMGTFGYLAPEYAMT----GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLK 730 (897)
Q Consensus 655 ~~~~~~~t~~~GT~~Y~APE~l~~----~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~ 730 (897)
. ...+...++..|+|||++.. ..++.++||||||+++|||++|+.||+..... ...+..... ....
T Consensus 157 ~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~------~~~~ 226 (283)
T cd06617 157 S---VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP-FQQLKQVVE------EPSP 226 (283)
T ss_pred c---cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC-HHHHHHHHh------cCCC
Confidence 1 12233568889999998764 45688999999999999999999998632211 111111000 0000
Q ss_pred ccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 731 TIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 731 ~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
.+. .......+.+++.+||..+|++||++.+|++.
T Consensus 227 ~~~--------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 227 QLP--------AEKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred CCC--------ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 01123567899999999999999999999763
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=316.17 Aligned_cols=266 Identities=26% Similarity=0.353 Sum_probs=202.5
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecc--cccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEe
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRA--NQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYE 575 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~--~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~E 575 (897)
++|++.++||+|+||.||+|... +++.||||+++.. .....+.+.+|++++++++|+||+++++++..++..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 46889999999999999999965 5889999998753 23344678999999999999999999999999999999999
Q ss_pred eccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccC
Q 002647 576 LIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655 (897)
Q Consensus 576 y~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~ 655 (897)
|++++.|..++.. ...+++.+++.++.||+.||+|||+.+ |+|+||+++||++++++.+||+|||++......
T Consensus 81 ~~~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~ 153 (288)
T cd07833 81 YVERTLLELLEAS----PGGLPPDAVRSYIWQLLQAIAYCHSHN---IIHRDIKPENILVSESGVLKLCDFGFARALRAR 153 (288)
T ss_pred cCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEEeeecccccCCC
Confidence 9998777766532 345899999999999999999999887 999999999999999999999999998865433
Q ss_pred CCcccccccccccccCChhhhhcC-CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhH-Hhhhh-------ccccc
Q 002647 656 GNKHISTHVMGTFGYLAPEYAMTG-HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLV-AWARP-------LLTTK 726 (897)
Q Consensus 656 ~~~~~~t~~~GT~~Y~APE~l~~~-~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv-~w~~~-------l~~~~ 726 (897)
.. .......++..|+|||++... .++.++||||||+++|||++|+.||......+..... .+... .....
T Consensus 154 ~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07833 154 PA-SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSN 232 (288)
T ss_pred cc-ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccC
Confidence 22 223446688899999999888 7899999999999999999999998643321110000 00000 00000
Q ss_pred c-----cccccccch-hccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 727 E-----GLKTIIDPV-IESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 727 e-----~l~~iiDp~-l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
. ......+.. ....+......++.+++.+||+.+|++||++.+|++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 233 PRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred ccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 0 000111110 011122223567899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=315.76 Aligned_cols=249 Identities=27% Similarity=0.412 Sum_probs=201.6
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc-ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
++|+..+.||.|+||.||+|... +++.||+|.+.... ......+.+|++++++++|+||+++++++.++...++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 36778899999999999999965 68899999987543 33446788999999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
+++++|.+++.. ..+++..++.++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||+++......
T Consensus 81 ~~~~~L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 152 (274)
T cd06609 81 CGGGSCLDLLKP-----GKLDETYIAFILREVLLGLEYLHEEG---KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM 152 (274)
T ss_pred eCCCcHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEcccccceeecccc
Confidence 999999999853 27899999999999999999999887 9999999999999999999999999997654321
Q ss_pred CcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccch
Q 002647 657 NKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPV 736 (897)
Q Consensus 657 ~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~ 736 (897)
.......++..|+|||++.+..++.++||||||+++|||+||+.||+...... .. .... .... +.
T Consensus 153 --~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~---~~---~~~~--~~~~-----~~ 217 (274)
T cd06609 153 --SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR---VL---FLIP--KNNP-----PS 217 (274)
T ss_pred --cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH---HH---HHhh--hcCC-----CC
Confidence 12234568889999999998889999999999999999999999997543211 00 0000 0000 11
Q ss_pred hccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 737 IESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 737 l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
+... .....+.+++.+||..+|++||+++++++.
T Consensus 218 ~~~~---~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 218 LEGN---KFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred Cccc---ccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 1111 023457889999999999999999999763
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=320.46 Aligned_cols=249 Identities=25% Similarity=0.378 Sum_probs=203.0
Q ss_pred CCceeeeEEeecCceEEEEEEe-cCCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeec
Q 002647 499 NGFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELI 577 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~ 577 (897)
.+|++.+.||.|+||.||+|.. .+|+.||+|.+........+.+.+|+++++.++|+|++++++++..++..++|+||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 4689999999999999999985 578999999997655555678899999999999999999999999999999999999
Q ss_pred cCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCC
Q 002647 578 HNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN 657 (897)
Q Consensus 578 ~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~ 657 (897)
++++|.+++.. ..+++.++..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++........
T Consensus 99 ~~~~L~~~~~~-----~~l~~~~~~~i~~~l~~al~~LH~~~---i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 170 (296)
T cd06655 99 AGGSLTDVVTE-----TCMDEAQIAAVCRECLQALEFLHANQ---VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS 170 (296)
T ss_pred CCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccchhcccccc
Confidence 99999998842 35899999999999999999999988 99999999999999999999999999876433221
Q ss_pred cccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchh
Q 002647 658 KHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVI 737 (897)
Q Consensus 658 ~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l 737 (897)
......++..|+|||.+.+..++.++|||||||++|||++|+.||...+.... .... .. .....+
T Consensus 171 --~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~--~~~~----~~--~~~~~~----- 235 (296)
T cd06655 171 --KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA--LYLI----AT--NGTPEL----- 235 (296)
T ss_pred --cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHH----Hh--cCCccc-----
Confidence 12335688899999999988899999999999999999999999965432111 1100 00 000000
Q ss_pred ccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 738 ESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 738 ~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
..+......+.+++.+||..||.+||++.+|++
T Consensus 236 --~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 236 --QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred --CCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 011122345778999999999999999999975
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=309.92 Aligned_cols=249 Identities=24% Similarity=0.354 Sum_probs=200.9
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeecc--cccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRA--NQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~--~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
+|+..+.||+|+||.||++... +|+.||+|.+... .....+++.+|++++++++|+||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 4788999999999999999954 6899999998743 233346789999999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
+.+++|.+++... ....+++.++++++.|++.||+|||+.+ ++|+||+|+|||++.++.++|+|||++.......
T Consensus 81 ~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~ 155 (256)
T cd08218 81 CEGGDLYKKINAQ--RGVLFPEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV 155 (256)
T ss_pred CCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEEeeccceeecCcch
Confidence 9999999988642 2235889999999999999999999887 9999999999999999999999999987543221
Q ss_pred CcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccch
Q 002647 657 NKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPV 736 (897)
Q Consensus 657 ~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~ 736 (897)
.......|+..|+|||++.+...+.++|||||||+++||++|+.||..... ... ....... ..
T Consensus 156 --~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~---~~~---~~~~~~~--~~------- 218 (256)
T cd08218 156 --ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM---KNL---VLKIIRG--SY------- 218 (256)
T ss_pred --hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH---HHH---HHHHhcC--CC-------
Confidence 122335688899999999988899999999999999999999999864321 111 1111100 00
Q ss_pred hccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 737 IESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 737 l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
...+......+.+++.+||+.+|++||++.||++
T Consensus 219 --~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 219 --PPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred --CCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 0012223456889999999999999999999976
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-36 Score=318.00 Aligned_cols=199 Identities=30% Similarity=0.410 Sum_probs=178.9
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~ 574 (897)
++|+..+.||.|+||.|-+++.+ +|..+|+|++++.. ..+.+...+|..+|+.+.||.++++.+.|.+.+..+|||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 45777899999999999999965 68889999997643 234456788999999999999999999999999999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
||++||.|..+|+. .+++++..+..+|.||+.||+|||..+ |++|||||+|||||.+|.+||+|||+|+....
T Consensus 124 eyv~GGElFS~Lrk----~~rF~e~~arFYAAeivlAleylH~~~---iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~ 196 (355)
T KOG0616|consen 124 EYVPGGELFSYLRK----SGRFSEPHARFYAAEIVLALEYLHSLD---IIYRDLKPENLLLDQNGHIKITDFGFAKRVSG 196 (355)
T ss_pred eccCCccHHHHHHh----cCCCCchhHHHHHHHHHHHHHHHHhcC---eeeccCChHHeeeccCCcEEEEeccceEEecC
Confidence 99999999999964 457999999999999999999999998 99999999999999999999999999987532
Q ss_pred CCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCC
Q 002647 655 EGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQP 709 (897)
Q Consensus 655 ~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~ 709 (897)
.+.+.+||+.|+|||+++...+..++|-|+|||++|||+.|..||...+.
T Consensus 197 -----rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~ 246 (355)
T KOG0616|consen 197 -----RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP 246 (355)
T ss_pred -----cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh
Confidence 24568999999999999999999999999999999999999999975543
|
|
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=329.69 Aligned_cols=192 Identities=24% Similarity=0.369 Sum_probs=165.4
Q ss_pred hhCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEe
Q 002647 497 ATNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYE 575 (897)
Q Consensus 497 at~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~E 575 (897)
...+|.+.+.||+|+||.||+|... +++.||+|+.... ....|+.+|++++|+||+++++++...+..++|+|
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 137 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP 137 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence 4568999999999999999999965 5678999975432 34579999999999999999999999999999999
Q ss_pred eccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccC
Q 002647 576 LIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655 (897)
Q Consensus 576 y~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~ 655 (897)
|+. |+|.+++.. ....+++.+++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 138 ~~~-~~l~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 210 (357)
T PHA03209 138 HYS-SDLYTYLTK---RSRPLPIDQALIIEKQILEGLRYLHAQR---IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA 210 (357)
T ss_pred ccC-CcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEecCccccccccC
Confidence 995 688888853 2456999999999999999999999988 999999999999999999999999998743221
Q ss_pred CCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCC
Q 002647 656 GNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPV 704 (897)
Q Consensus 656 ~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pf 704 (897)
.......||..|+|||++.+..++.++|||||||++|||+++..++
T Consensus 211 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 211 ---PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred ---cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 1223456899999999999999999999999999999999966554
|
|
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-36 Score=310.29 Aligned_cols=265 Identities=24% Similarity=0.311 Sum_probs=212.7
Q ss_pred hhCCceeeeEEeecCceEEEEEE-ecCCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCC-----ce
Q 002647 497 ATNGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDN-----NR 570 (897)
Q Consensus 497 at~~y~~~~~LG~G~fGtVyka~-l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~-----~~ 570 (897)
..++|.+.+.||+|||..||+++ +.++..+|+|++.....++.+..++|++..++++|||++++++++..+. ..
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 45689999999999999999999 6678999999998777777788999999999999999999999986544 48
Q ss_pred EEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcch
Q 002647 571 CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR 650 (897)
Q Consensus 571 ~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr 650 (897)
||+++|...|+|.+.+......+..+++.+.++|+.+|++||++||+.. ++++||||||.|||+.+.+.++|.|||.+.
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGSAT 177 (302)
T ss_pred EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccCcc
Confidence 9999999999999999876666668999999999999999999999885 689999999999999999999999999986
Q ss_pred hcccC---CCc----ccccccccccccCChhhhh---cCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhh
Q 002647 651 TALDE---GNK----HISTHVMGTFGYLAPEYAM---TGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWAR 720 (897)
Q Consensus 651 ~~~~~---~~~----~~~t~~~GT~~Y~APE~l~---~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~ 720 (897)
...-. ... ........|.-|.|||.+. +...++++|||||||+||+|+.|..||+.....
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~---------- 247 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQ---------- 247 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhc----------
Confidence 43211 100 0112345789999999875 446689999999999999999999999743221
Q ss_pred hccccccccccc-ccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 002647 721 PLLTTKEGLKTI-IDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLV 777 (897)
Q Consensus 721 ~l~~~~e~l~~i-iDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l 777 (897)
++.+.-. ....+.-.-.....+.+.+++.+|++.||.+||++.|++..+..+
T Consensus 248 -----GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 248 -----GGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred -----CCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 1111111 111111111112456788999999999999999999999888765
|
|
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=313.58 Aligned_cols=255 Identities=25% Similarity=0.408 Sum_probs=198.6
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccc----------cchHHHHHHHHHHhhccCCceeeEeeeeecCC
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQ----------HGGREFLAELEMLSRLHHRNLVKLFGVCIEDN 568 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~----------~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~ 568 (897)
+|...+.||+|+||.||+|... +|+.||+|.++.... ...+.+.+|++++++++|+|++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4677899999999999999854 689999998863211 01246788999999999999999999999999
Q ss_pred ceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCc
Q 002647 569 NRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGL 648 (897)
Q Consensus 569 ~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGL 648 (897)
..++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.+||+|||+
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~~~nil~~~~~~~~l~d~~~ 154 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRT----YGRFEEQLVRFFTEQVLEGLAYLHSKG---ILHRDLKADNLLVDADGICKISDFGI 154 (272)
T ss_pred ceEEEEecCCCCcHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHhhCC---eeecCCChhhEEEcCCCeEEEeeccc
Confidence 99999999999999999953 256899999999999999999999887 99999999999999999999999999
Q ss_pred chhcccCCCcccccccccccccCChhhhhcCC--CCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccc
Q 002647 649 ARTALDEGNKHISTHVMGTFGYLAPEYAMTGH--LLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTK 726 (897)
Q Consensus 649 Ar~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~--~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~ 726 (897)
++...............|+..|+|||++.... ++.++||||||+++|||++|+.||...... ..+... . .
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~~~~----~--~ 226 (272)
T cd06629 155 SKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI--AAMFKL----G--N 226 (272)
T ss_pred cccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchH--HHHHHh----h--c
Confidence 87643222222223456889999999987654 789999999999999999999998532211 111110 0 0
Q ss_pred ccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 727 EGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 727 e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
......++. ....+....+.+++..||+.+|++||++.||++.
T Consensus 227 ~~~~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 227 KRSAPPIPP----DVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred cccCCcCCc----cccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 011111111 1112234578889999999999999999999763
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=318.06 Aligned_cols=265 Identities=25% Similarity=0.369 Sum_probs=200.0
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccc--cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEe
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQ--HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYE 575 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~--~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~E 575 (897)
++|+..++||+|+||.||+|..+ +++.||+|++..... ...+.+.+|++++++++|+||+++++++..++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 46889999999999999999975 589999999864332 234578899999999999999999999999999999999
Q ss_pred eccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccC
Q 002647 576 LIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655 (897)
Q Consensus 576 y~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~ 655 (897)
|+++++|.++... ...+++.+++.++.||++||+|||+.+ |+|+||+|+||++++++.+||+|||++......
T Consensus 81 ~~~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07846 81 FVDHTVLDDLEKY----PNGLDESRVRKYLFQILRGIEFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 153 (286)
T ss_pred cCCccHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCcEEEEeeeeeeeccCC
Confidence 9999999887642 235899999999999999999999887 999999999999999999999999998765332
Q ss_pred CCcccccccccccccCChhhhhc-CCCCccccEEechhHHHHHHhCCCCCCCCCCCCc-hhhHHhhhhccccccc-----
Q 002647 656 GNKHISTHVMGTFGYLAPEYAMT-GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQ-ENLVAWARPLLTTKEG----- 728 (897)
Q Consensus 656 ~~~~~~t~~~GT~~Y~APE~l~~-~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~-~~lv~w~~~l~~~~e~----- 728 (897)
. .......++..|+|||++.+ ..++.++||||||+++|||++|+.||......+. ..+..+...+......
T Consensus 154 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (286)
T cd07846 154 G--EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKN 231 (286)
T ss_pred c--cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccc
Confidence 2 22234567899999999875 3467899999999999999999999864332110 0111111111000000
Q ss_pred --ccccccchhcc-----CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 729 --LKTIIDPVIES-----NISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 729 --l~~iiDp~l~~-----~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
...+..+.... .........+.+++.+||+.+|++||++.||++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 232 PLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred hHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 00000000000 001123456889999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-36 Score=319.94 Aligned_cols=256 Identities=26% Similarity=0.429 Sum_probs=203.5
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc-ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
++|++.++||+|+||+||++... +|+.||+|++.... ....+.+.+|+++++.++|+||+++++++...+..++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 56778899999999999999964 68899999886533 33456889999999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhcc-CCCcEEecCCCCCcEEEccCCceEEeccCcchhcccC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHED-SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~-gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~ 655 (897)
+++|+|.+++.. .+.+++..+..++.+++.+|.|||+. + |+||||||+||++++++.++|+|||++......
T Consensus 85 ~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~ 157 (284)
T cd06620 85 MDCGSLDRIYKK----GGPIPVEILGKIAVAVVEGLTYLYNVHR---IMHRDIKPSNILVNSRGQIKLCDFGVSGELINS 157 (284)
T ss_pred CCCCCHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHHhcC---eeccCCCHHHEEECCCCcEEEccCCcccchhhh
Confidence 999999998853 34689999999999999999999963 5 999999999999999999999999998654221
Q ss_pred CCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCc-----hhhHHhhhhccccccccc
Q 002647 656 GNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQ-----ENLVAWARPLLTTKEGLK 730 (897)
Q Consensus 656 ~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~-----~~lv~w~~~l~~~~e~l~ 730 (897)
. .....|+..|+|||++.+..++.++|||||||++|||+||+.||+.....+. ..+..+........
T Consensus 158 ~----~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 229 (284)
T cd06620 158 I----ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP---- 229 (284)
T ss_pred c----cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc----
Confidence 1 1235689999999999888899999999999999999999999975433211 11112222111100
Q ss_pred ccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 002647 731 TIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775 (897)
Q Consensus 731 ~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~ 775 (897)
.+.+. ..+....+.+++.+|++.||++||++.||+++..
T Consensus 230 ---~~~~~---~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~ 268 (284)
T cd06620 230 ---PPRLP---SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPP 268 (284)
T ss_pred ---CCCCC---chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence 00000 1123456889999999999999999999987643
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-35 Score=307.84 Aligned_cols=257 Identities=28% Similarity=0.447 Sum_probs=204.5
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc-ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
++|++.+.||.|+||+||+|... ++..+|+|++.... ....+.+.+|+++|+.++|+|++++++.+..++..++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 47889999999999999999954 67899999986433 22457899999999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
+++++|.+++..... ...+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++.......
T Consensus 81 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lh~~~---i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~ 156 (267)
T cd06610 81 LSGGSLLDIMKSSYP-RGGLDEAIIATVLKEVLKGLEYLHSNG---QIHRDIKAGNILLGEDGSVKIADFGVSASLADGG 156 (267)
T ss_pred cCCCcHHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccchHHHhccCc
Confidence 999999999964321 246899999999999999999999888 9999999999999999999999999998665433
Q ss_pred Cc--ccccccccccccCChhhhhcC-CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccc
Q 002647 657 NK--HISTHVMGTFGYLAPEYAMTG-HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTII 733 (897)
Q Consensus 657 ~~--~~~t~~~GT~~Y~APE~l~~~-~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~ii 733 (897)
.. .......|+..|+|||++... .++.++||||||+++|||++|+.||...... ..+....+. .
T Consensus 157 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~--~~~~~~~~~---~-------- 223 (267)
T cd06610 157 DRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM--KVLMLTLQN---D-------- 223 (267)
T ss_pred cccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh--hhHHHHhcC---C--------
Confidence 22 122345688999999998877 7889999999999999999999999644321 111111110 0
Q ss_pred cchhccCC-CHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 734 DPVIESNI-SYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 734 Dp~l~~~~-~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
.+.+.... .......+.+++.+||+.||++||++.||++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 224 PPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred CCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 00011000 0123356789999999999999999999975
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=329.42 Aligned_cols=264 Identities=26% Similarity=0.342 Sum_probs=196.7
Q ss_pred hhCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecc--cccchHHHHHHHHHHhhccCCceeeEeeeeecC------
Q 002647 497 ATNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRA--NQHGGREFLAELEMLSRLHHRNLVKLFGVCIED------ 567 (897)
Q Consensus 497 at~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~--~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~------ 567 (897)
..++|.+.+.||+|+||.||++... .++.||||++... .....+.+.+|+.+++.++|+||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 3578999999999999999999954 6889999998753 233346788999999999999999999987643
Q ss_pred CceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccC
Q 002647 568 NNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFG 647 (897)
Q Consensus 568 ~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFG 647 (897)
...++||||+++ +|.+++. ..+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG 171 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 171 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHH------hcCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEECCCCcEEEEeCC
Confidence 356999999975 6766663 24889999999999999999999887 9999999999999999999999999
Q ss_pred cchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhH-H--------h
Q 002647 648 LARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLV-A--------W 718 (897)
Q Consensus 648 LAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv-~--------w 718 (897)
+++.... ........||..|+|||++.+..++.++|||||||++|||++|+.||...+..+..+.+ . +
T Consensus 172 ~a~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 248 (364)
T cd07875 172 LARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEF 248 (364)
T ss_pred CccccCC---CCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence 9975422 12223457899999999999999999999999999999999999999754321111100 0 0
Q ss_pred h-------hhccccccccc-----ccccchh---ccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 719 A-------RPLLTTKEGLK-----TIIDPVI---ESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 719 ~-------~~l~~~~e~l~-----~iiDp~l---~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
. ........... .+..... ...........+.+++.+|++.||.+|||+.|+++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 249 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0 00000000000 0000000 000011123467899999999999999999999774
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=311.92 Aligned_cols=246 Identities=31% Similarity=0.499 Sum_probs=196.6
Q ss_pred CCceeeeEEeecCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeecc
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIH 578 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~ 578 (897)
++|.+.+.||+|+||.||++.. +++.||+|.++... ..+.+.+|+.++++++|+|++++++++..+ ..++||||+.
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence 4578889999999999999975 47889999986532 346789999999999999999999998764 5799999999
Q ss_pred CCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCc
Q 002647 579 NGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNK 658 (897)
Q Consensus 579 gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~ 658 (897)
+|+|.+++.... ...+++..++.++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~---~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~--- 153 (254)
T cd05083 82 KGNLVNFLRTRG--RALVSVIQLLQFSLDVAEGMEYLESKK---LVHRDLAARNILVSEDGVAKVSDFGLARVGSMG--- 153 (254)
T ss_pred CCCHHHHHHhcC--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCcEEECCCccceecccc---
Confidence 999999996432 345899999999999999999999887 999999999999999999999999998753221
Q ss_pred ccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccccccchh
Q 002647 659 HISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVI 737 (897)
Q Consensus 659 ~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l 737 (897)
......+..|+|||++.+..++.++||||||+++|||++ |+.||...... .+..... . ..
T Consensus 154 --~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~---~~~~~~~----~--~~-------- 214 (254)
T cd05083 154 --VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK---EVKECVE----K--GY-------- 214 (254)
T ss_pred --CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH---HHHHHHh----C--CC--------
Confidence 112234568999999988899999999999999999998 99998643321 1111110 0 00
Q ss_pred ccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 002647 738 ESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775 (897)
Q Consensus 738 ~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~ 775 (897)
...........+.+++.+||+.+|++||++.||++.|+
T Consensus 215 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 215 RMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLE 252 (254)
T ss_pred CCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHc
Confidence 00011223356789999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=312.21 Aligned_cols=256 Identities=30% Similarity=0.457 Sum_probs=201.4
Q ss_pred HhhCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccccchHHHHHHHHHHhhc-cCCceeeEeeeeecCC-----
Q 002647 496 KATNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLAELEMLSRL-HHRNLVKLFGVCIEDN----- 568 (897)
Q Consensus 496 ~at~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~~----- 568 (897)
..+++|++.+.||+|+||.||+|..+ +++.+++|++..... ..+++.+|+++++++ +|+||+++++++....
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 35688999999999999999999975 678999999875443 346789999999999 7999999999997644
Q ss_pred -ceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccC
Q 002647 569 -NRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFG 647 (897)
Q Consensus 569 -~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFG 647 (897)
..++||||+++++|.+++.........+++..+..++.|+++||.|||+.+ ++|+||+|+||++++++.+||+|||
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~~l~p~ni~~~~~~~~~l~d~~ 158 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK---VIHRDIKGQNILLTKNAEVKLVDFG 158 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEEccCCeEEECCCc
Confidence 479999999999999998654333467999999999999999999999887 9999999999999999999999999
Q ss_pred cchhcccCCCcccccccccccccCChhhhhc-----CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhc
Q 002647 648 LARTALDEGNKHISTHVMGTFGYLAPEYAMT-----GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPL 722 (897)
Q Consensus 648 LAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~-----~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l 722 (897)
++....... .......|+..|+|||++.. ..++.++||||||+++|||++|+.||..... ...+....
T Consensus 159 ~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~~~~--- 231 (275)
T cd06608 159 VSAQLDSTL--GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHP--MRALFKIP--- 231 (275)
T ss_pred cceecccch--hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccch--HHHHHHhh---
Confidence 987543221 22234568899999998753 3467899999999999999999999963221 11111110
Q ss_pred ccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 723 LTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 723 ~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
...... +. ........+.+++.+||..||++||++.||++
T Consensus 232 ---~~~~~~-----~~--~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 232 ---RNPPPT-----LK--SPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred ---ccCCCC-----CC--chhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 000000 10 11223457889999999999999999999975
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=317.35 Aligned_cols=253 Identities=24% Similarity=0.379 Sum_probs=202.6
Q ss_pred hCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
.++|++.+.||.|+||.||+|... ++..||+|.++.......+.|.+|++++++++|+||+++++++..+...++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 456888899999999999999965 6889999999866555567899999999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
+++++|.+++... ...+++.++..++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++.......
T Consensus 84 ~~~~~L~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 157 (280)
T cd06611 84 CDGGALDSIMLEL---ERGLTEPQIRYVCRQMLEALNFLHSHK---VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL 157 (280)
T ss_pred cCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEECCCCCEEEccCccchhhcccc
Confidence 9999999998532 346999999999999999999999988 9999999999999999999999999987543221
Q ss_pred CcccccccccccccCChhhhh-----cCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccc
Q 002647 657 NKHISTHVMGTFGYLAPEYAM-----TGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKT 731 (897)
Q Consensus 657 ~~~~~t~~~GT~~Y~APE~l~-----~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~ 731 (897)
.......++..|+|||++. ...++.++||||||+++|||++|+.||...... ..+..+.. . ..
T Consensus 158 --~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~----~---~~- 225 (280)
T cd06611 158 --QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM--RVLLKILK----S---EP- 225 (280)
T ss_pred --cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH--HHHHHHhc----C---CC-
Confidence 1223456899999999875 345678999999999999999999999643221 11111110 0 00
Q ss_pred cccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 732 IIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 732 iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
+.+. .+......+.+++..||+.+|.+||++.+|++.
T Consensus 226 ---~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 226 ---PTLD--QPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred ---CCcC--CcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 0000 111223467889999999999999999999764
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=308.05 Aligned_cols=250 Identities=32% Similarity=0.519 Sum_probs=198.9
Q ss_pred eeeeEEeecCceEEEEEEecC-----CCEEEEEEeeccccc-chHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEe
Q 002647 502 HTSRIIGEGGFGVVYRGILDD-----GREVAVKVLKRANQH-GGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYE 575 (897)
Q Consensus 502 ~~~~~LG~G~fGtVyka~l~~-----g~~VAVK~lk~~~~~-~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~E 575 (897)
.+.+.||.|+||.||++...+ +..||+|.++..... ..+.+.+|++++++++|+||+++++++.+.+..++|||
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e 81 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME 81 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence 456899999999999999753 388999999765433 45789999999999999999999999999999999999
Q ss_pred eccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccC
Q 002647 576 LIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655 (897)
Q Consensus 576 y~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~ 655 (897)
|+++++|.+++.... ...+++.+++.++.|++.||+|||+.+ ++|+||||+||++++++.++|+|||+++.....
T Consensus 82 ~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lh~~~---~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 156 (258)
T smart00219 82 YMEGGDLLDYLRKNR--PKELSLSDLLSFALQIARGMEYLESKN---FIHRDLAARNCLVGENLVVKISDFGLSRDLYDD 156 (258)
T ss_pred ccCCCCHHHHHHhhh--hccCCHHHHHHHHHHHHHHHHHHhcCC---eeecccccceEEEccCCeEEEcccCCceecccc
Confidence 999999999996422 112899999999999999999999987 999999999999999999999999999765433
Q ss_pred CCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhccccccccccccc
Q 002647 656 GNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIID 734 (897)
Q Consensus 656 ~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiD 734 (897)
.... .....++..|+|||.+.+..++.++||||||++++||++ |+.||+.... ..+...... .. ..
T Consensus 157 ~~~~-~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~---~~~~~~~~~----~~-~~---- 223 (258)
T smart00219 157 DYYK-KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN---EEVLEYLKK----GY-RL---- 223 (258)
T ss_pred cccc-cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHhc----CC-CC----
Confidence 2211 112336789999999988889999999999999999998 7888864221 122211110 00 00
Q ss_pred chhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002647 735 PVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL 774 (897)
Q Consensus 735 p~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L 774 (897)
.........+.+++.+|++.+|++||++.|+++.|
T Consensus 224 -----~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 224 -----PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -----CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 01111345688899999999999999999998754
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-35 Score=314.77 Aligned_cols=260 Identities=27% Similarity=0.411 Sum_probs=202.4
Q ss_pred ecHHHHHHhhCCceeeeEEeecCceEEEEEEe-cCCCEEEEEEeecccccchHHHHHHHHHHhhc-cCCceeeEeeeeec
Q 002647 489 FTLNDIEKATNGFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRANQHGGREFLAELEMLSRL-HHRNLVKLFGVCIE 566 (897)
Q Consensus 489 f~~~ei~~at~~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~ 566 (897)
.++.++....+.|++.+.||+|+||.||+|.. .+++.+|+|++.... ....++..|+.+++++ +|+||+++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 35566667788999999999999999999996 468899999986543 2335788999999998 79999999999863
Q ss_pred ------CCceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCc
Q 002647 567 ------DNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFT 640 (897)
Q Consensus 567 ------~~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~ 640 (897)
....++||||+.+|+|.+++.... ...+++..++.++.||++||+|||+.+ |+|+||||+||++++++.
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dl~~~nili~~~~~ 159 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTK--GNALKEDWIAYICREILRGLAHLHAHK---VIHRDIKGQNVLLTENAE 159 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHcc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCC
Confidence 356799999999999999986422 345888999999999999999999987 999999999999999999
Q ss_pred eEEeccCcchhcccCCCcccccccccccccCChhhhh-----cCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhh
Q 002647 641 PKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAM-----TGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENL 715 (897)
Q Consensus 641 vKLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~-----~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~l 715 (897)
++|+|||++....... .......|+..|+|||.+. ...++.++|||||||++|||++|+.||...........
T Consensus 160 ~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~ 237 (282)
T cd06636 160 VKLVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFL 237 (282)
T ss_pred EEEeeCcchhhhhccc--cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhh
Confidence 9999999987543211 1123356889999999876 34678899999999999999999999964322111000
Q ss_pred HHhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 716 VAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 716 v~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
. .. .....+ ........+.+++.+||+.||.+||++.|+++
T Consensus 238 ~---------~~----~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 238 I---------PR----NPPPKL---KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred H---------hh----CCCCCC---cccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 0 00 000000 01123356889999999999999999999865
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-36 Score=317.33 Aligned_cols=239 Identities=24% Similarity=0.471 Sum_probs=189.1
Q ss_pred eEEeecCceEEEEEEecC--------CCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 505 RIIGEGGFGVVYRGILDD--------GREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~~--------g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
+.||+|+||.||+|.... ...||+|.+........+.+.+|+.++++++|+|++++++++..++..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 369999999999998642 234888888765555557889999999999999999999999998999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCc--------eEEeccCc
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFT--------PKVSDFGL 648 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~--------vKLsDFGL 648 (897)
+++|+|.++++.. ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++. +|++|||+
T Consensus 81 ~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~ 154 (258)
T cd05078 81 VKFGSLDTYLKKN---KNLINISWKLEVAKQLAWALHFLEDKG---LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGI 154 (258)
T ss_pred CCCCcHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEecccccccCCCceEEeccccc
Confidence 9999999999642 236899999999999999999999887 999999999999987765 69999998
Q ss_pred chhcccCCCcccccccccccccCChhhhhcC-CCCccccEEechhHHHHHHhCC-CCCCCCCCCCchhhHHhhhhccccc
Q 002647 649 ARTALDEGNKHISTHVMGTFGYLAPEYAMTG-HLLVKSDVYSYGVVLLELLTGR-KPVDLSQPPGQENLVAWARPLLTTK 726 (897)
Q Consensus 649 Ar~~~~~~~~~~~t~~~GT~~Y~APE~l~~~-~~t~kSDVwSfGvIL~ELlTGk-~Pfd~~~~~~~~~lv~w~~~l~~~~ 726 (897)
+..... .....++..|+|||++.+. .++.++||||||+++|||++|. .|+...... ..... ....
T Consensus 155 ~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~---~~~~~----~~~~ 221 (258)
T cd05078 155 SITVLP------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ---KKLQF----YEDR 221 (258)
T ss_pred ccccCC------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH---HHHHH----HHcc
Confidence 865422 1234678899999998864 5789999999999999999985 555432211 10000 0000
Q ss_pred ccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002647 727 EGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL 774 (897)
Q Consensus 727 e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L 774 (897)
..++......+.+++.+||+.||++||+++|+++.|
T Consensus 222 ------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 222 ------------HQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred ------------ccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 011112235678999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=317.66 Aligned_cols=263 Identities=24% Similarity=0.353 Sum_probs=197.8
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc-ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
++|.+.+.||+|+||.||+|... +++.||+|.++... ......+.+|++++++++|+||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 56889999999999999999965 67899999987433 23335678999999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
+. ++|.+++... ...+++..+..++.|+++||+|||+.+ |+|+||||+|||+++++.+||+|||++.......
T Consensus 86 ~~-~~l~~~l~~~---~~~~~~~~~~~~~~qi~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 158 (301)
T cd07873 86 LD-KDLKQYLDDC---GNSINMHNVKLFLFQLLRGLNYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPT 158 (301)
T ss_pred cc-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHHHEEECCCCcEEECcCcchhccCCCC
Confidence 97 5888888532 346889999999999999999999887 9999999999999999999999999987542211
Q ss_pred CcccccccccccccCChhhhhcC-CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhH----------Hhhhhcccc
Q 002647 657 NKHISTHVMGTFGYLAPEYAMTG-HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLV----------AWARPLLTT 725 (897)
Q Consensus 657 ~~~~~t~~~GT~~Y~APE~l~~~-~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv----------~w~~~l~~~ 725 (897)
.......++..|+|||++.+. .++.++|||||||++|||+||+.||......+....+ .|.. +..
T Consensus 159 --~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~- 234 (301)
T cd07873 159 --KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPG-ILS- 234 (301)
T ss_pred --CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchh-hhc-
Confidence 112234578899999988754 5788999999999999999999999754321111100 0100 000
Q ss_pred cccccccccchhcc----CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 726 KEGLKTIIDPVIES----NISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 726 ~e~l~~iiDp~l~~----~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
.+.....-.+.... .........+.+|+.+|++.||.+|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 235 NEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred cccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 00000000000000 001122345788999999999999999999986
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-35 Score=305.72 Aligned_cols=252 Identities=26% Similarity=0.405 Sum_probs=206.5
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccc-cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQ-HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~-~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
++|++.+.||+|++|.||+|+.. +++.||||++..... ...+++.+|++++.+++|+|++++++++...+..++||||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 46888999999999999999976 589999999876543 3457899999999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhc-cCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHE-DSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~-~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~ 655 (897)
+++++|.+++.. ...+++..++.++.|+++||+|||+ .+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~~~~~L~~~l~~----~~~l~~~~~~~~~~~l~~~l~~lh~~~~---~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~ 153 (264)
T cd06623 81 MDGGSLADLLKK----VGKIPEPVLAYIARQILKGLDYLHTKRH---IIHRDIKPSNLLINSKGEVKIADFGISKVLENT 153 (264)
T ss_pred cCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHhccCC---CccCCCCHHHEEECCCCCEEEccCccceecccC
Confidence 999999999953 2569999999999999999999998 77 999999999999999999999999998865332
Q ss_pred CCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccc
Q 002647 656 GNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDP 735 (897)
Q Consensus 656 ~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp 735 (897)
.. ......++..|+|||.+.+..++.++||||||+++|||+||+.||..........+..+... ... +
T Consensus 154 ~~--~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~-----~~~-----~ 221 (264)
T cd06623 154 LD--QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICD-----GPP-----P 221 (264)
T ss_pred CC--cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhc-----CCC-----C
Confidence 22 12245688999999999988899999999999999999999999975443222222222110 000 0
Q ss_pred hhccCCCHH-HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 736 VIESNISYD-TLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 736 ~l~~~~~~e-~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
..+.. ....+.+++.+||+.+|++||++.|+++.
T Consensus 222 ----~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 222 ----SLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred ----CCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 11112 34678899999999999999999999874
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=311.95 Aligned_cols=260 Identities=25% Similarity=0.349 Sum_probs=203.4
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccc-cchHHHHHHHHHHhhccCCceeeEeeeeecC--CceEEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQ-HGGREFLAELEMLSRLHHRNLVKLFGVCIED--NNRCLVY 574 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~-~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~--~~~~LV~ 574 (897)
++|...+.||.|++|.||++... +++.+|+|.+..... ....++.+|++++++++|+||++++++|.+. +..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 46889999999999999999974 678999999875332 3446789999999999999999999998654 3679999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
||+++++|.+++.........+++..+..++.|++.||+|||+.+ ++|+||+++||++++++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK---IIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 999999999887543333456899999999999999999999887 99999999999999999999999999875432
Q ss_pred CCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCC--CCchhhHHhhhhccccccccccc
Q 002647 655 EGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQP--PGQENLVAWARPLLTTKEGLKTI 732 (897)
Q Consensus 655 ~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~--~~~~~lv~w~~~l~~~~e~l~~i 732 (897)
.. .....++..|+|||.+.+..++.++||||||+++|||++|+.||+.... ....++..|..... ...+
T Consensus 158 ~~----~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 228 (287)
T cd06621 158 SL----AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMP-----NPEL 228 (287)
T ss_pred cc----cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCC-----chhh
Confidence 11 1234578899999999988999999999999999999999999975532 11122222221100 0000
Q ss_pred ccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 733 IDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 733 iDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
..... ........+.+++.+||+.+|.+||++.||++.
T Consensus 229 -~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 229 -KDEPG--NGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred -ccCCC--CCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 00000 011234578899999999999999999999873
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-35 Score=308.41 Aligned_cols=253 Identities=23% Similarity=0.419 Sum_probs=200.1
Q ss_pred CceeeeEEeecCceEEEEEEe-cCCCEEEEEEeecccc------cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEE
Q 002647 500 GFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRANQ------HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCL 572 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~~~------~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~L 572 (897)
+|+..+.||+|+||.||+|.. .+++.||+|.+..... ...+.+.+|++++++++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477789999999999999995 5789999999874321 124678999999999999999999999999999999
Q ss_pred EEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCC-ceEEeccCcchh
Q 002647 573 VYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDF-TPKVSDFGLART 651 (897)
Q Consensus 573 V~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~-~vKLsDFGLAr~ 651 (897)
||||+++++|.+++.. ...+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++ .+||+|||++..
T Consensus 81 v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~al~~LH~~~---i~H~~i~~~nil~~~~~~~~~l~dfg~~~~ 153 (268)
T cd06630 81 FVEWMAGGSVSHLLSK----YGAFKEAVIINYTEQLLRGLSYLHENQ---IIHRDVKGANLLIDSTGQRLRIADFGAAAR 153 (268)
T ss_pred EEeccCCCcHHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEcccccccc
Confidence 9999999999999853 346899999999999999999999988 99999999999998775 599999999876
Q ss_pred cccCCC--cccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccc
Q 002647 652 ALDEGN--KHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGL 729 (897)
Q Consensus 652 ~~~~~~--~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l 729 (897)
...... ........++..|+|||.+.+..++.++||||||+++|||++|+.||............. ....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~---~~~~----- 225 (268)
T cd06630 154 LAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIF---KIAS----- 225 (268)
T ss_pred cccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHH---HHhc-----
Confidence 543211 111223568899999999988888999999999999999999999996433211111110 0000
Q ss_pred cccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 730 KTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 730 ~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
.......+......+.+++.+|++.+|++||++.|+++
T Consensus 226 -----~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 226 -----ATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred -----cCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 00011122334456788999999999999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-35 Score=313.61 Aligned_cols=262 Identities=24% Similarity=0.338 Sum_probs=195.2
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc--ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN--QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
+|+..+.||+|+||.||+|+.. +|+.||+|+++... ......+.+|++++++++|+||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4788899999999999999965 68999999986432 22335678899999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
++ ++|.+++.. ....+++..++.++.||++||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 153 (284)
T cd07839 81 CD-QDLKKYFDS---CNGDIDPEIVKSFMFQLLKGLAFCHSHN---VLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 153 (284)
T ss_pred CC-CCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEcCCCcEEECccchhhccCCCC
Confidence 97 478877753 2356999999999999999999999988 9999999999999999999999999987543211
Q ss_pred CcccccccccccccCChhhhhcCC-CCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccc-c-c---ccc
Q 002647 657 NKHISTHVMGTFGYLAPEYAMTGH-LLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTT-K-E---GLK 730 (897)
Q Consensus 657 ~~~~~t~~~GT~~Y~APE~l~~~~-~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~-~-e---~l~ 730 (897)
.......++..|+|||++.+.. ++.++|||||||++|||+||+.|+....... ..+ ......... . + .+.
T Consensus 154 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07839 154 --RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD-DQL-KRIFRLLGTPTEESWPGVS 229 (284)
T ss_pred --CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHH-HHH-HHHHHHhCCCChHHhHHhh
Confidence 1223345788999999987654 6899999999999999999999864322211 110 000000000 0 0 000
Q ss_pred ccccch----hcc-----CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 731 TIIDPV----IES-----NISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 731 ~iiDp~----l~~-----~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
.+.+.. ... .........+.+++.+||+.||.+|||+.|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 230 KLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred hcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 000000 000 001122356788999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-35 Score=317.70 Aligned_cols=199 Identities=27% Similarity=0.370 Sum_probs=161.0
Q ss_pred eeEEeecCceEEEEEEec---CCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeec--CCceEEEEeecc
Q 002647 504 SRIIGEGGFGVVYRGILD---DGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIE--DNNRCLVYELIH 578 (897)
Q Consensus 504 ~~~LG~G~fGtVyka~l~---~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~--~~~~~LV~Ey~~ 578 (897)
.++||+|+||+||+|... +++.||+|.++... ....+.+|+++|++++|+||+++++++.. +...++||||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 468999999999999964 46789999987542 23567899999999999999999999864 345789999986
Q ss_pred CCccccccccCC-----CCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEE----ccCCceEEeccCcc
Q 002647 579 NGSLESHLHGDD-----KVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILL----EHDFTPKVSDFGLA 649 (897)
Q Consensus 579 gGSL~~~L~~~~-----~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILL----d~~~~vKLsDFGLA 649 (897)
+ +|.+++.... .....+++..+..++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||++
T Consensus 84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 H-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred C-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 4 7777764221 11235899999999999999999999988 9999999999999 45678999999999
Q ss_pred hhcccCCC-cccccccccccccCChhhhhcC-CCCccccEEechhHHHHHHhCCCCCCCCC
Q 002647 650 RTALDEGN-KHISTHVMGTFGYLAPEYAMTG-HLLVKSDVYSYGVVLLELLTGRKPVDLSQ 708 (897)
Q Consensus 650 r~~~~~~~-~~~~t~~~GT~~Y~APE~l~~~-~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~ 708 (897)
+....... ........||+.|+|||++.+. .++.++|||||||++|||++|+.||....
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~ 220 (317)
T cd07868 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCc
Confidence 86532211 1122346789999999998764 57899999999999999999999997543
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-35 Score=309.30 Aligned_cols=250 Identities=23% Similarity=0.354 Sum_probs=194.7
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc-----ccchHHHHHHHHHHhhccCCceeeEeeeeecC--Cce
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN-----QHGGREFLAELEMLSRLHHRNLVKLFGVCIED--NNR 570 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~-----~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~--~~~ 570 (897)
.+|.+.++||+|+||.||+|... +|..||||.+.... ....+.+.+|+.++++++|+||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 47889999999999999999964 58999999886322 12235688899999999999999999988764 457
Q ss_pred EEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcch
Q 002647 571 CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR 650 (897)
Q Consensus 571 ~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr 650 (897)
++||||+++++|.+++.. ...+++..+++++.|++.||+|||+.+ |+|+||||+|||++.++.+||+|||+++
T Consensus 82 ~~v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~Dfg~~~ 154 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKS----YGALTENVTRKYTRQILEGVSYLHSNM---IVHRDIKGANILRDSVGNVKLGDFGASK 154 (265)
T ss_pred EEEEEecCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEecCCCCEEECcCcccc
Confidence 899999999999999853 245889999999999999999999888 9999999999999999999999999987
Q ss_pred hcccCCC-cccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccc
Q 002647 651 TALDEGN-KHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGL 729 (897)
Q Consensus 651 ~~~~~~~-~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l 729 (897)
....... ........|+..|+|||++.+..++.++||||||+++|||++|+.||...... ... .. ... ..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--~~~---~~-~~~--~~- 225 (265)
T cd06652 155 RLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM--AAI---FK-IAT--QP- 225 (265)
T ss_pred ccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH--HHH---HH-Hhc--CC-
Confidence 5432111 11122346889999999998888999999999999999999999999643211 100 00 000 00
Q ss_pred cccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 730 KTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 730 ~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
.....+......+.+++.+|+. +|++||++.||++
T Consensus 226 -------~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 226 -------TNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred -------CCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 0011222334567788899985 8999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=322.30 Aligned_cols=264 Identities=20% Similarity=0.242 Sum_probs=193.8
Q ss_pred eeeEEeec--CceEEEEEEe-cCCCEEEEEEeeccc--ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeec
Q 002647 503 TSRIIGEG--GFGVVYRGIL-DDGREVAVKVLKRAN--QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELI 577 (897)
Q Consensus 503 ~~~~LG~G--~fGtVyka~l-~~g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~ 577 (897)
+.++||+| +|++||++.. .+|+.||||+++... ....+.+.+|+++++.++|+||++++++|..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 35789999 7889999996 478999999997532 223356778999999999999999999999999999999999
Q ss_pred cCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCC
Q 002647 578 HNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN 657 (897)
Q Consensus 578 ~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~ 657 (897)
++|+|.+++.... ...+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.++++||+........+.
T Consensus 82 ~~~~l~~~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~ 156 (327)
T cd08227 82 AYGSAKDLICTHF--MDGMSELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQ 156 (327)
T ss_pred CCCcHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCChhhEEEecCCcEEEcccchhhccccccc
Confidence 9999999985321 235899999999999999999999888 99999999999999999999999987654322111
Q ss_pred c-----ccccccccccccCChhhhhc--CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccc----c-
Q 002647 658 K-----HISTHVMGTFGYLAPEYAMT--GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLT----T- 725 (897)
Q Consensus 658 ~-----~~~t~~~GT~~Y~APE~l~~--~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~----~- 725 (897)
. .......++..|+|||++.. ..++.++|||||||++|||++|+.||....... ........... .
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~ 234 (327)
T cd08227 157 RLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ--MLLEKLNGTVPCLLDTT 234 (327)
T ss_pred cccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhH--HHHHHhcCCcccccccc
Confidence 1 01122356778999999876 458899999999999999999999996432211 00000000000 0
Q ss_pred ----------------ccccccc---------ccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 726 ----------------KEGLKTI---------IDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 726 ----------------~e~l~~i---------iDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
....... ................+.+++.+||+.||++|||+.|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 235 TIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred chhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 0000000 00000000111233568899999999999999999999873
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-35 Score=306.54 Aligned_cols=248 Identities=24% Similarity=0.383 Sum_probs=199.5
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc--ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN--QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
+|+..+.||+|+||.||++... +++.+|||.+.... ....+.+.+|+++|++++|+|++++++.+..++..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 5888999999999999999964 68899999986532 33456789999999999999999999999988999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccC-CceEEeccCcchhcccC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHD-FTPKVSDFGLARTALDE 655 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~-~~vKLsDFGLAr~~~~~ 655 (897)
+++++|.+++.... ...+++..+++++.|++++|+|||+.+ |+|+||||+||+++++ +.+||+|||++......
T Consensus 81 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (256)
T cd08220 81 APGGTLAEYIQKRC--NSLLDEDTILHFFVQILLALHHVHTKL---ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK 155 (256)
T ss_pred CCCCCHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccCCCceecCCC
Confidence 99999999996422 345899999999999999999999987 9999999999999855 46899999999865332
Q ss_pred CCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccc
Q 002647 656 GNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDP 735 (897)
Q Consensus 656 ~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp 735 (897)
. ......++..|+|||.+....++.++||||||+++|+|++|+.||+..+.. ...... .. .....
T Consensus 156 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~---~~~~~~---~~--~~~~~---- 220 (256)
T cd08220 156 S---KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP---ALVLKI---MS--GTFAP---- 220 (256)
T ss_pred c---cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH---HHHHHH---Hh--cCCCC----
Confidence 1 122356888999999999888899999999999999999999999654321 111111 00 00001
Q ss_pred hhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 736 VIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 736 ~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
........+.+++.+||+.+|++||++.|+++
T Consensus 221 -----~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 221 -----ISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred -----CCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 11123456789999999999999999999975
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=326.02 Aligned_cols=235 Identities=25% Similarity=0.307 Sum_probs=182.8
Q ss_pred EeecCceEEEEEEec-CCCEEEEEEeecccc---cchHHHHHHHHHHhhc---cCCceeeEeeeeecCCceEEEEeeccC
Q 002647 507 IGEGGFGVVYRGILD-DGREVAVKVLKRANQ---HGGREFLAELEMLSRL---HHRNLVKLFGVCIEDNNRCLVYELIHN 579 (897)
Q Consensus 507 LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~---~~~~~f~~Ev~iL~~L---~HpNIV~Llg~~~~~~~~~LV~Ey~~g 579 (897)
||+|+||+||+|... +|+.||||++..... .....+..|..++.++ +|+||+++++++.+.+..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999965 689999999865321 2223456677777765 699999999999999999999999999
Q ss_pred CccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcc
Q 002647 580 GSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH 659 (897)
Q Consensus 580 GSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~ 659 (897)
|+|.+++.. ...+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 g~L~~~l~~----~~~~~~~~~~~~~~qil~al~~LH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~--~ 151 (330)
T cd05586 81 GELFWHLQK----EGRFSEDRAKFYIAELVLALEHLHKYD---IVYRDLKPENILLDATGHIALCDFGLSKANLTDN--K 151 (330)
T ss_pred ChHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC--C
Confidence 999998853 356899999999999999999999988 9999999999999999999999999987532221 2
Q ss_pred cccccccccccCChhhhhcC-CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhc
Q 002647 660 ISTHVMGTFGYLAPEYAMTG-HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIE 738 (897)
Q Consensus 660 ~~t~~~GT~~Y~APE~l~~~-~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~ 738 (897)
......||..|+|||++.+. .++.++|||||||++|||+||+.||...... .+. ..+.... ..+..
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~---~~~---~~i~~~~---~~~~~---- 218 (330)
T cd05586 152 TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQ---QMY---RNIAFGK---VRFPK---- 218 (330)
T ss_pred CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHH---HHH---HHHHcCC---CCCCC----
Confidence 23346799999999998764 4789999999999999999999999643211 111 1110000 00000
Q ss_pred cCCCHHHHHHHHHHHHHccCCCCCCCCCH
Q 002647 739 SNISYDTLVKVAAIASMCVQPEVSHRPFM 767 (897)
Q Consensus 739 ~~~~~e~~~~L~~Li~~CL~~dP~~RPTm 767 (897)
. .....+.+++.+||+.||++||++
T Consensus 219 ~----~~~~~~~~li~~~L~~~P~~R~~~ 243 (330)
T cd05586 219 N----VLSDEGRQFVKGLLNRNPQHRLGA 243 (330)
T ss_pred c----cCCHHHHHHHHHHcCCCHHHCCCC
Confidence 0 122456789999999999999854
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-35 Score=313.30 Aligned_cols=253 Identities=23% Similarity=0.429 Sum_probs=199.0
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecc-cccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRA-NQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~-~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
++|++.+.||+|+||.||++... +|..||+|.++.. .....+.+.+|++++++++|+||+++++.+...+..++||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 35778899999999999999975 7899999998753 223346789999999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhcc-CCCcEEecCCCCCcEEEccCCceEEeccCcchhcccC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHED-SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~-gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~ 655 (897)
+++++|..++.... ....+++..+..++.|++.||.|||+. + |+||||||+||+++.++.+||+|||++......
T Consensus 81 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 156 (286)
T cd06622 81 MDAGSLDKLYAGGV-ATEGIPEDVLRRITYAVVKGLKFLKEEHN---IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS 156 (286)
T ss_pred cCCCCHHHHHHhcc-ccCCCCHHHHHHHHHHHHHHHHHHHhcCC---EeeCCCCHHHEEECCCCCEEEeecCCcccccCC
Confidence 99999999886421 134689999999999999999999964 5 999999999999999999999999998754221
Q ss_pred CCcccccccccccccCChhhhhcC------CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccc
Q 002647 656 GNKHISTHVMGTFGYLAPEYAMTG------HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGL 729 (897)
Q Consensus 656 ~~~~~~t~~~GT~~Y~APE~l~~~------~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l 729 (897)
......++..|+|||++... .++.++|||||||++|||++|+.||....... ...-..
T Consensus 157 ----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~~~--------- 220 (286)
T cd06622 157 ----LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN---IFAQLS--------- 220 (286)
T ss_pred ----ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh---HHHHHH---------
Confidence 22334678899999988544 34789999999999999999999996432111 110000
Q ss_pred cccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 730 KTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 730 ~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
.+.+.. ....+.+....+.+++.+||+.+|++||++.|+++.
T Consensus 221 -~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 221 -AIVDGD-PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred -HHhhcC-CCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 011100 011222344567889999999999999999999764
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-35 Score=317.22 Aligned_cols=199 Identities=27% Similarity=0.369 Sum_probs=160.8
Q ss_pred eeEEeecCceEEEEEEec---CCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeec--CCceEEEEeecc
Q 002647 504 SRIIGEGGFGVVYRGILD---DGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIE--DNNRCLVYELIH 578 (897)
Q Consensus 504 ~~~LG~G~fGtVyka~l~---~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~--~~~~~LV~Ey~~ 578 (897)
.++||+|+||+||+|+.. ++..||+|.++... ....+.+|+++|++++|+||+++++++.. +...++||||+.
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 368999999999999965 35789999987543 23568899999999999999999999854 456789999987
Q ss_pred CCccccccccCC-----CCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEE----ccCCceEEeccCcc
Q 002647 579 NGSLESHLHGDD-----KVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILL----EHDFTPKVSDFGLA 649 (897)
Q Consensus 579 gGSL~~~L~~~~-----~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILL----d~~~~vKLsDFGLA 649 (897)
+ +|.+++.... .....+++..+..++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||++
T Consensus 84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 84 H-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred C-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 5 7777664211 12235889999999999999999999987 9999999999999 56679999999999
Q ss_pred hhcccCCCc-ccccccccccccCChhhhhcC-CCCccccEEechhHHHHHHhCCCCCCCCC
Q 002647 650 RTALDEGNK-HISTHVMGTFGYLAPEYAMTG-HLLVKSDVYSYGVVLLELLTGRKPVDLSQ 708 (897)
Q Consensus 650 r~~~~~~~~-~~~t~~~GT~~Y~APE~l~~~-~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~ 708 (897)
+........ .......||..|+|||++.+. .++.++|||||||++|||+||+.||....
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~ 220 (317)
T cd07867 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccccc
Confidence 865332211 122345789999999998764 57899999999999999999999997543
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-35 Score=355.59 Aligned_cols=264 Identities=24% Similarity=0.319 Sum_probs=204.5
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~ 574 (897)
++|++.++||+|+||.||+|... +|+.||||++.... ....+.|.+|++++++++||||+++++++.+.+..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57999999999999999999965 58999999997532 223457899999999999999999999999999999999
Q ss_pred eeccCCccccccccCCC-------CCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccC
Q 002647 575 ELIHNGSLESHLHGDDK-------VNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFG 647 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~-------~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFG 647 (897)
||+++|+|.+++..... ....+++..+++++.||++||+|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G---IIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG---VLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchheEEEcCCCCEEEEecC
Confidence 99999999998863211 1234678889999999999999999987 9999999999999999999999999
Q ss_pred cchhcccCCC----------------cccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCC
Q 002647 648 LARTALDEGN----------------KHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPG 711 (897)
Q Consensus 648 LAr~~~~~~~----------------~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~ 711 (897)
+++....... ........||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 9986521110 011123569999999999999999999999999999999999999996532211
Q ss_pred chhhHHhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHHHHHhh
Q 002647 712 QENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRP-FMGEVVQALKLVCNE 780 (897)
Q Consensus 712 ~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RP-Tm~EVl~~L~~l~~e 780 (897)
.. +.. .+.++.... ...+....+.+++.+|++.||++|+ ++.++.+.|+...+.
T Consensus 239 ---i~-~~~----------~i~~P~~~~-p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~ 293 (932)
T PRK13184 239 ---IS-YRD----------VILSPIEVA-PYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQG 293 (932)
T ss_pred ---hh-hhh----------hccChhhcc-ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 10 000 000100000 0012234577899999999999995 677777778776543
|
|
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-35 Score=324.54 Aligned_cols=261 Identities=26% Similarity=0.337 Sum_probs=195.2
Q ss_pred HhhCCceeeeEEeecCceEEEEEEe-cCCCEEEEEEeeccc--ccchHHHHHHHHHHhhccCCceeeEeeeeecC-----
Q 002647 496 KATNGFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRAN--QHGGREFLAELEMLSRLHHRNLVKLFGVCIED----- 567 (897)
Q Consensus 496 ~at~~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~----- 567 (897)
...++|.+.+.||+|+||+||+|.. .+++.||||++.... ....+.+.+|+++|++++|+||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 3567899999999999999999995 468899999987532 22345678999999999999999999987543
Q ss_pred -CceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEecc
Q 002647 568 -NNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDF 646 (897)
Q Consensus 568 -~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDF 646 (897)
...++++|++ +++|.+++. ...+++..+..++.||+.||+|||+.+ |+||||||+|||+++++.+||+||
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Df 162 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVK-----CQKLSDEHVQFLIYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDF 162 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhhEEECCCCCEEEcCC
Confidence 3568999988 778988774 245999999999999999999999988 999999999999999999999999
Q ss_pred CcchhcccCCCcccccccccccccCChhhhhc-CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccc
Q 002647 647 GLARTALDEGNKHISTHVMGTFGYLAPEYAMT-GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTT 725 (897)
Q Consensus 647 GLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~-~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~ 725 (897)
|+++..... .....||..|+|||++.+ ..++.++|||||||++|||++|+.||...... ..+..+....-..
T Consensus 163 g~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~~~~~~~~~ 235 (343)
T cd07878 163 GLARQADDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI--DQLKRIMEVVGTP 235 (343)
T ss_pred ccceecCCC-----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHH--HHHHHHHHHhCCC
Confidence 999864321 234568999999999876 56889999999999999999999999643221 1111110000000
Q ss_pred -cccc--------cccc-------cchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 726 -KEGL--------KTII-------DPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 726 -~e~l--------~~ii-------Dp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
.+.. ...+ ...+.. ........+.+|+.+|++.||++||++.|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 236 SPEVLKKISSEHARKYIQSLPHMPQQDLKK-IFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred CHHHHHhcchhhHHHHhhccccccchhHHH-hccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000 0000 000000 000112346789999999999999999999864
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=321.84 Aligned_cols=262 Identities=27% Similarity=0.345 Sum_probs=198.3
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCC-----ceEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDN-----NRCL 572 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~-----~~~L 572 (897)
-.|...+++|.|+||.||+|++. +++.||||++-.... .-.+|+++|++++|||||+|+-+|.... ...|
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnl 99 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNL 99 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHH
Confidence 34667899999999999999965 578999999865432 2237999999999999999998886432 2358
Q ss_pred EEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccC-CceEEeccCcchh
Q 002647 573 VYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHD-FTPKVSDFGLART 651 (897)
Q Consensus 573 V~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~-~~vKLsDFGLAr~ 651 (897)
|||||+. +|.++++.....+..++...+.-+..||.+||+|||+.+ |+||||||.|||+|.+ |.+||||||.|+.
T Consensus 100 VleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~---IcHRDIKPqNlLvD~~tg~LKicDFGSAK~ 175 (364)
T KOG0658|consen 100 VLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG---ICHRDIKPQNLLVDPDTGVLKICDFGSAKV 175 (364)
T ss_pred HHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC---cccCCCChheEEEcCCCCeEEeccCCccee
Confidence 9999987 999999754444567888888889999999999999987 9999999999999966 9999999999997
Q ss_pred cccCCCcccccccccccccCChhhhhcC-CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccc-ccccc
Q 002647 652 ALDEGNKHISTHVMGTFGYLAPEYAMTG-HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLT-TKEGL 729 (897)
Q Consensus 652 ~~~~~~~~~~t~~~GT~~Y~APE~l~~~-~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~-~~e~l 729 (897)
...+.. ......|..|.|||.+.+. .|+.+.||||.|||+.||+-|+.-|.+.+..++ ++...+.+-. .++.+
T Consensus 176 L~~~ep---niSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQ--L~eIik~lG~Pt~e~I 250 (364)
T KOG0658|consen 176 LVKGEP---NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQ--LVEIIKVLGTPTREDI 250 (364)
T ss_pred eccCCC---ceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHH--HHHHHHHhCCCCHHHH
Confidence 654322 2456778999999998864 789999999999999999999999977544332 2221111110 01111
Q ss_pred c-------ccccchhcc-----CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 730 K-------TIIDPVIES-----NISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 730 ~-------~iiDp~l~~-----~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
. +.-.+.+.. -+......+..+++.++++.+|.+|-+..|++..
T Consensus 251 ~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 251 KSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred hhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 1 111111111 1223344677899999999999999999998753
|
|
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=310.19 Aligned_cols=253 Identities=27% Similarity=0.449 Sum_probs=202.4
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc-ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
++|+..+.||+|+||.||++... +++.||+|++.... ....+++.+|++++++++|+||+++++++..++..++|+||
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 35777889999999999999976 68999999987643 23446789999999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhc-cCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHE-DSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~-~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~ 655 (897)
+++++|.+++... ...+++..+.+++.|+++||+|||+ .+ ++|+||||+||++++++.+||+|||++......
T Consensus 81 ~~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~~---i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~ 154 (265)
T cd06605 81 MDGGSLDKILKEV---QGRIPERILGKIAVAVLKGLTYLHEKHK---IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS 154 (265)
T ss_pred cCCCcHHHHHHHc---cCCCCHHHHHHHHHHHHHHHHHHcCCCC---eecCCCCHHHEEECCCCCEEEeecccchhhHHH
Confidence 9999999998642 2578999999999999999999998 76 999999999999999999999999998755322
Q ss_pred CCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccc
Q 002647 656 GNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDP 735 (897)
Q Consensus 656 ~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp 735 (897)
.. ....++..|+|||++.+..++.++||||||+++|+|++|+.||....... .......+...... .+
T Consensus 155 ~~----~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~-------~~ 222 (265)
T cd06605 155 LA----KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPP-DGIFELLQYIVNEP-------PP 222 (265)
T ss_pred Hh----hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccc-ccHHHHHHHHhcCC-------CC
Confidence 11 12668889999999999899999999999999999999999996442211 11122111111100 00
Q ss_pred hhccCCCHH-HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 736 VIESNISYD-TLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 736 ~l~~~~~~e-~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
....+ ....+.+++..||..||++||++.|+++.
T Consensus 223 ----~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 223 ----RLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred ----CCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 01111 34567899999999999999999998753
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=316.05 Aligned_cols=265 Identities=25% Similarity=0.290 Sum_probs=203.5
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccccch--HHHHHHHHHHhhccCCceeeEeeeeecC--CceEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQHGG--REFLAELEMLSRLHHRNLVKLFGVCIED--NNRCLV 573 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~~~--~~f~~Ev~iL~~L~HpNIV~Llg~~~~~--~~~~LV 573 (897)
+.|+.++.|++|.||.||+|+.+ +++.||+|+++...+... -.-++||.+|.+++|+|||.+..+.... +..|+|
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 35667799999999999999965 789999999986543321 2467999999999999999999887643 568999
Q ss_pred EeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcc
Q 002647 574 YELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTAL 653 (897)
Q Consensus 574 ~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~ 653 (897)
||||+. +|..+|+.. ..++...++..+..|+++||+|||.+. |+|||||++|+|+...|.+||+||||||.+.
T Consensus 156 Me~~Eh-DLksl~d~m---~q~F~~~evK~L~~QlL~glk~lH~~w---ilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 156 MEYVEH-DLKSLMETM---KQPFLPGEVKTLMLQLLRGLKHLHDNW---ILHRDLKTSNLLLSHKGILKIADFGLAREYG 228 (419)
T ss_pred HHHHHh-hHHHHHHhc---cCCCchHHHHHHHHHHHHHHHHHhhce---eEecccchhheeeccCCcEEecccchhhhhc
Confidence 999987 888888643 367999999999999999999999998 9999999999999999999999999999874
Q ss_pred cCCCcccccccccccccCChhhhhcC-CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhh--------hhccc
Q 002647 654 DEGNKHISTHVMGTFGYLAPEYAMTG-HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWA--------RPLLT 724 (897)
Q Consensus 654 ~~~~~~~~t~~~GT~~Y~APE~l~~~-~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~--------~~l~~ 724 (897)
.. ....+..+-|.+|.|||.+.+. .|+...|+||+|||+.||+++++-|.+....++.+.+--. |+-+.
T Consensus 229 sp--~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~ 306 (419)
T KOG0663|consen 229 SP--LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYS 306 (419)
T ss_pred CC--cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCcc
Confidence 43 2345677889999999998865 6789999999999999999999999876654443332100 11010
Q ss_pred ccc-----cccccccchhccCCCHH-HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 725 TKE-----GLKTIIDPVIESNISYD-TLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 725 ~~e-----~l~~iiDp~l~~~~~~e-~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
.-. ....-....+...+... ..+.-.+|+...+..||.+|-|+.|.++
T Consensus 307 ~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 307 ELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred ccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 000 00011111222222221 2345567888999999999999999865
|
|
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=311.11 Aligned_cols=265 Identities=22% Similarity=0.310 Sum_probs=196.4
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccc-cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQ-HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~-~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
++|+..+.||+|+||+||+|..+ +++.||||.+..... .....+.+|++++++++|+||+++++++.+++..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 67889999999999999999965 689999999875332 2234678899999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
+.+ +|.+++... ...+++..+..++.|+++||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 85 ~~~-~L~~~~~~~---~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~ 157 (291)
T cd07844 85 LDT-DLKQYMDDC---GGGLSMHNVRLFLFQLLRGLAYCHQRR---VLHRDLKPQNLLISERGELKLADFGLARAKSVPS 157 (291)
T ss_pred CCC-CHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCHHHEEEcCCCCEEECccccccccCCCC
Confidence 985 899888532 246899999999999999999999887 9999999999999999999999999987532211
Q ss_pred CcccccccccccccCChhhhhc-CCCCccccEEechhHHHHHHhCCCCCCCCCCCCc-hhhHHhhhhcc---------cc
Q 002647 657 NKHISTHVMGTFGYLAPEYAMT-GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQ-ENLVAWARPLL---------TT 725 (897)
Q Consensus 657 ~~~~~t~~~GT~~Y~APE~l~~-~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~-~~lv~w~~~l~---------~~ 725 (897)
.......++..|+|||++.+ ..++.++||||||+++|||++|+.||........ ........... ..
T Consensus 158 --~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (291)
T cd07844 158 --KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSN 235 (291)
T ss_pred --ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhc
Confidence 11122346889999998875 4578999999999999999999999964431100 00000000000 00
Q ss_pred ----cccccccccchhccCC-CHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 726 ----KEGLKTIIDPVIESNI-SYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 726 ----~e~l~~iiDp~l~~~~-~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
...........+.... .......+.+++.+|++.+|++||++.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 236 PEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred cccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 0000000000010000 1111256788999999999999999999865
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-35 Score=306.00 Aligned_cols=252 Identities=29% Similarity=0.433 Sum_probs=200.4
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccccc--chHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQH--GGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~--~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
+|...+.||+|+||.||+|... +++.||+|.++..... ..+.+.+|++++++++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 4788899999999999999964 6899999999765443 567899999999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
+++++|.+++.. ...+++..+..|+.|++.||.|||+.+ |+|+||+++||++++++.+||+|||++.......
T Consensus 81 ~~~~~L~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~ 153 (264)
T cd06626 81 CSGGTLEELLEH----GRILDEHVIRVYTLQLLEGLAYLHSHG---IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNT 153 (264)
T ss_pred CCCCcHHHHHhh----cCCCChHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEcccccccccCCCC
Confidence 999999999853 345889999999999999999999988 9999999999999999999999999987653322
Q ss_pred Cccc--ccccccccccCChhhhhcCC---CCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccc
Q 002647 657 NKHI--STHVMGTFGYLAPEYAMTGH---LLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKT 731 (897)
Q Consensus 657 ~~~~--~t~~~GT~~Y~APE~l~~~~---~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~ 731 (897)
.... .....++..|+|||++.... ++.++||||||+++|||++|+.||...... ...... .. ...
T Consensus 154 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~--~~~~~~---~~--~~~--- 223 (264)
T cd06626 154 TTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE--FQIMFH---VG--AGH--- 223 (264)
T ss_pred CcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch--HHHHHH---Hh--cCC---
Confidence 2111 11356788999999988766 789999999999999999999999643211 111000 00 000
Q ss_pred cccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 732 IIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 732 iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
.+.+.. .......+.+++.+||+.+|.+||++.|++.
T Consensus 224 --~~~~~~--~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 224 --KPPIPD--SLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred --CCCCCc--ccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000110 1112456778999999999999999999864
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-35 Score=310.86 Aligned_cols=263 Identities=25% Similarity=0.306 Sum_probs=200.6
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc--ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN--QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
+|++.+.||+|+||.||+|... +|+.||||++.... ......+.+|++++++++|+||+++++++..+...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4788999999999999999964 68999999987543 33346799999999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
+ +++|.+++... ...+++.+++.++.||++||+|||+.+ |+|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (286)
T cd07832 81 M-PSDLSEVLRDE---ERPLPEAQVKSYMRMLLKGVAYMHANG---IMHRDLKPANLLISADGVLKIADFGLARLFSEEE 153 (286)
T ss_pred c-CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCHHHEEEcCCCcEEEeeeeecccccCCC
Confidence 9 99999998632 356999999999999999999999887 9999999999999999999999999988654322
Q ss_pred CcccccccccccccCChhhhhcC-CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccc-----------
Q 002647 657 NKHISTHVMGTFGYLAPEYAMTG-HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLT----------- 724 (897)
Q Consensus 657 ~~~~~t~~~GT~~Y~APE~l~~~-~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~----------- 724 (897)
. .......|+..|+|||++.+. .++.++||||||+++|||+||+.+|...... ....+......
T Consensus 154 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07832 154 P-RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI---EQLAIVFRTLGTPNEETWPGLT 229 (286)
T ss_pred C-CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH---HHHHHHHHHcCCCChHHHhhcc
Confidence 1 122345689999999988654 4689999999999999999998877543221 11111100000
Q ss_pred ccccccccccchh----ccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 725 TKEGLKTIIDPVI----ESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 725 ~~e~l~~iiDp~l----~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
.......+..+.. ......+....+.+++.+|++.+|++||+++++++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 230 SLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred CcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000000000000 000111223678899999999999999999999763
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-35 Score=316.77 Aligned_cols=253 Identities=26% Similarity=0.310 Sum_probs=200.1
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccccc---chHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQH---GGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~---~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~ 574 (897)
++|+..+.||+|+||+||+|... +++.||+|.+...... ..+.+.+|++++++++|+||+++++++..++..++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 46889999999999999999965 5899999999754322 3456889999999999999999999999999999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
||+.+++|.+++... ....+++..+..++.|+++||+|||+.+ ++|+||||+||+++.++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 155 (316)
T cd05574 81 DYCPGGELFRLLQRQ--PGKCLSEEVARFYAAEVLLALEYLHLLG---IVYRDLKPENILLHESGHIMLSDFDLSKQSDV 155 (316)
T ss_pred EecCCCCHHHHHHhC--CCCccCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChHHeEEcCCCCEEEeecchhhcccc
Confidence 999999999998632 2356999999999999999999999887 99999999999999999999999999875422
Q ss_pred CCCc---------------------------ccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCC
Q 002647 655 EGNK---------------------------HISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLS 707 (897)
Q Consensus 655 ~~~~---------------------------~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~ 707 (897)
.... .......|+..|+|||++.+..++.++||||||+++|+|++|+.||...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~ 235 (316)
T cd05574 156 EPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGS 235 (316)
T ss_pred cccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCC
Confidence 1110 0112346888999999999888999999999999999999999999644
Q ss_pred CCCCchhhHHhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCC----HHHHHH
Q 002647 708 QPPGQENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPF----MGEVVQ 772 (897)
Q Consensus 708 ~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPT----m~EVl~ 772 (897)
+.. ..+.. +.+..............+.+++.+||+.||++||+ +.|+++
T Consensus 236 ~~~--~~~~~--------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 236 NRD--ETFSN--------------ILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred chH--HHHHH--------------HhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 321 11110 00100000001113467889999999999999999 555544
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=300.66 Aligned_cols=251 Identities=27% Similarity=0.387 Sum_probs=203.7
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccc--cchHHHHHHHHHHhhccCCceeeEeeeeecC--CceEEEE
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQ--HGGREFLAELEMLSRLHHRNLVKLFGVCIED--NNRCLVY 574 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~--~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~--~~~~LV~ 574 (897)
+|...+.||+|++|.||+|... +++.|++|++..... ...+.+.+|++++++++|+||+++++.+... ...++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4778899999999999999976 789999999875442 4457899999999999999999999999988 7899999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
||+++++|.+++... ..+++.+++.++.|+++||+|||+.+ ++|+||+|+||+++.++.+||+|||.+.....
T Consensus 81 e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~~---~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 153 (260)
T cd06606 81 EYVSGGSLSSLLKKF----GKLPEPVIRKYTRQILEGLAYLHSNG---IVHRDIKGANILVDSDGVVKLADFGCAKRLGD 153 (260)
T ss_pred EecCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEcccccEEeccc
Confidence 999999999998532 37999999999999999999999987 99999999999999999999999999886543
Q ss_pred CCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccccccccccc
Q 002647 655 EGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIID 734 (897)
Q Consensus 655 ~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiD 734 (897)
...........++..|++||.+.....+.++||||||+++++|++|+.||..... ... . ..... .
T Consensus 154 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~-~--~~~~~----------~ 218 (260)
T cd06606 154 IETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN--PMA-A--LYKIG----------S 218 (260)
T ss_pred ccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc--hHH-H--HHhcc----------c
Confidence 3221112345688999999999888899999999999999999999999975431 010 0 01110 0
Q ss_pred chhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 735 PVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 735 p~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
.......+......+.+++.+|++.+|++||++.|+++
T Consensus 219 ~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 219 SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 00011122233467889999999999999999999975
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=313.06 Aligned_cols=262 Identities=26% Similarity=0.314 Sum_probs=197.7
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccccc-----chHHHHHHHHHHhhccCCceeeEeeeeecCCceEEE
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQH-----GGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLV 573 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~-----~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV 573 (897)
+|+..+.||+|+||.||+|... +|+.||||.++..... ....+..|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4778899999999999999964 6899999999754322 234577899999999999999999999998899999
Q ss_pred EeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcc
Q 002647 574 YELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTAL 653 (897)
Q Consensus 574 ~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~ 653 (897)
|||+ +|+|.+++... ...+++..++.++.||++||+|||+.+ |+|+||||+|||++.++.+||+|||+++...
T Consensus 81 ~e~~-~~~L~~~i~~~---~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~ 153 (298)
T cd07841 81 FEFM-ETDLEKVIKDK---SIVLTPADIKSYMLMTLRGLEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLARSFG 153 (298)
T ss_pred Eccc-CCCHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCChhhEEEcCCCCEEEccceeeeecc
Confidence 9999 89999999532 136999999999999999999999988 9999999999999999999999999997653
Q ss_pred cCCCcccccccccccccCChhhhhc-CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccc-------
Q 002647 654 DEGNKHISTHVMGTFGYLAPEYAMT-GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTT------- 725 (897)
Q Consensus 654 ~~~~~~~~t~~~GT~~Y~APE~l~~-~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~------- 725 (897)
.... ......++..|+|||.+.+ ..++.++|||||||++|||++|..+|......+ .+......+...
T Consensus 154 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 229 (298)
T cd07841 154 SPNR--KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDID--QLGKIFEALGTPTEENWPG 229 (298)
T ss_pred CCCc--cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHH--HHHHHHHHcCCCchhhhhh
Confidence 3221 1223456788999998865 457899999999999999999987776433211 110000000000
Q ss_pred cccccccccchhccC-----CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 726 KEGLKTIIDPVIESN-----ISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 726 ~e~l~~iiDp~l~~~-----~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
...+........... ........+.+++.+||+.||++||++.||++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 230 VTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred cccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 000000000000000 11223457889999999999999999999976
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=318.13 Aligned_cols=267 Identities=27% Similarity=0.337 Sum_probs=207.4
Q ss_pred hhCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeec--ccccchHHHHHHHHHHhhccCCceeeEeeeeec-----CC
Q 002647 497 ATNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKR--ANQHGGREFLAELEMLSRLHHRNLVKLFGVCIE-----DN 568 (897)
Q Consensus 497 at~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~--~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~-----~~ 568 (897)
....|...+.||+|+||.|+.++.. +|+.||||++.+ ......+...+|+++|+.++|+||+.+++++.. -+
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 3455666789999999999999964 789999999973 445556788999999999999999999999875 35
Q ss_pred ceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCc
Q 002647 569 NRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGL 648 (897)
Q Consensus 569 ~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGL 648 (897)
..|+|+|+|+ -+|.+.|+. +..|+...+..++.|+++||.|+|+.+ |+||||||+|+|++.+..+||+||||
T Consensus 100 DvYiV~elMe-tDL~~iik~----~~~L~d~H~q~f~YQiLrgLKyiHSAn---ViHRDLKPsNll~n~~c~lKI~DFGL 171 (359)
T KOG0660|consen 100 DVYLVFELME-TDLHQIIKS----QQDLTDDHAQYFLYQILRGLKYIHSAN---VIHRDLKPSNLLLNADCDLKICDFGL 171 (359)
T ss_pred eeEEehhHHh-hHHHHHHHc----CccccHHHHHHHHHHHHHhcchhhccc---ccccccchhheeeccCCCEEeccccc
Confidence 7799999994 489888853 345999999999999999999999988 99999999999999999999999999
Q ss_pred chhcccCCCcccccccccccccCChhhhhc-CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccc
Q 002647 649 ARTALDEGNKHISTHVMGTFGYLAPEYAMT-GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKE 727 (897)
Q Consensus 649 Ar~~~~~~~~~~~t~~~GT~~Y~APE~l~~-~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e 727 (897)
||...........|....|..|.|||++.. ..|+.+.||||.|||+.||++|+.-|.+.+.-.+..++...-... ..+
T Consensus 172 AR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP-~~e 250 (359)
T KOG0660|consen 172 ARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTP-SEE 250 (359)
T ss_pred eeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCC-CHH
Confidence 998754433445577889999999998764 578999999999999999999999998766544444332111111 011
Q ss_pred cccccccch---------------hccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 728 GLKTIIDPV---------------IESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 728 ~l~~iiDp~---------------l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
.+..+-... ...-++ ......++|+.+||..||.+|+|++|.++.
T Consensus 251 ~l~~i~s~~ar~yi~slp~~p~~~f~~~fp-~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 251 DLQKIRSEKARPYIKSLPQIPKQPFSSIFP-NANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HHHHhccHHHHHHHHhCCCCCCCCHHHHcC-CCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 111111000 000111 233456789999999999999999998764
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=333.10 Aligned_cols=257 Identities=29% Similarity=0.424 Sum_probs=212.5
Q ss_pred CCceeeeEEeecCceEEEEEEecC---C--CEEEEEEeec-ccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILDD---G--REVAVKVLKR-ANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCL 572 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~~---g--~~VAVK~lk~-~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~L 572 (897)
+.....++||.|-||.||+|+..+ | -.||||..+. ......+.|+.|.-+|++++|||||+|+|+|.+ +..++
T Consensus 389 e~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~Wi 467 (974)
T KOG4257|consen 389 ELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWI 467 (974)
T ss_pred hhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeE
Confidence 344556889999999999999532 3 3589999987 444556789999999999999999999999987 56799
Q ss_pred EEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhc
Q 002647 573 VYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTA 652 (897)
Q Consensus 573 V~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~ 652 (897)
|||.++-|.|..||.. ....|+......++.||+.+|+|||+.. +|||||..+|||+....-|||+||||+|..
T Consensus 468 vmEL~~~GELr~yLq~---nk~sL~l~tL~ly~~Qi~talaYLeSkr---fVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ 541 (974)
T KOG4257|consen 468 VMELAPLGELREYLQQ---NKDSLPLRTLTLYCYQICTALAYLESKR---FVHRDIAARNILVSSPQCVKLADFGLSRYL 541 (974)
T ss_pred EEecccchhHHHHHHh---ccccchHHHHHHHHHHHHHHHHHHHhhc---hhhhhhhhhheeecCcceeeecccchhhhc
Confidence 9999999999999963 3457999999999999999999999877 999999999999999999999999999987
Q ss_pred ccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccc
Q 002647 653 LDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKT 731 (897)
Q Consensus 653 ~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~ 731 (897)
.++.... .+...-...|||||.+.-.+++.+||||.|||.+||++. |.+||.+-...+.. -
T Consensus 542 ed~~yYk-aS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI----------------~- 603 (974)
T KOG4257|consen 542 EDDAYYK-ASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVI----------------G- 603 (974)
T ss_pred cccchhh-ccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceE----------------E-
Confidence 5544433 345566789999999999999999999999999999987 99999754332211 1
Q ss_pred cccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHhh
Q 002647 732 IIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNE 780 (897)
Q Consensus 732 iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~~e 780 (897)
.++..-+-..+..+...|..|+.+||..||.+||.+.|+...|..+..+
T Consensus 604 ~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~qe 652 (974)
T KOG4257|consen 604 HIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQE 652 (974)
T ss_pred EecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHH
Confidence 1111112234567778899999999999999999999999999887653
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-36 Score=309.15 Aligned_cols=249 Identities=26% Similarity=0.335 Sum_probs=206.1
Q ss_pred hCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEE
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLV 573 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV 573 (897)
.++|++.+.||+|.||.||.|+.+ ++-.||+|++.+.. .....++.+|+++-..|+||||++++++|.+....||+
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 356888999999999999999954 67889999997533 23346899999999999999999999999999999999
Q ss_pred EeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcc
Q 002647 574 YELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTAL 653 (897)
Q Consensus 574 ~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~ 653 (897)
+||..+|+|...|.+. ...++++.....+..|+|.||.|+|..+ ||||||||+|+|++.++.+||+|||-+....
T Consensus 101 lEya~~gel~k~L~~~--~~~~f~e~~~a~Yi~q~A~Al~y~h~k~---VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p 175 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEG--RMKRFDEQRAATYIKQLANALLYCHLKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAP 175 (281)
T ss_pred EEecCCchHHHHHHhc--ccccccccchhHHHHHHHHHHHHhccCC---cccCCCCHHHhccCCCCCeeccCCCceeecC
Confidence 9999999999999743 3467899999999999999999999887 9999999999999999999999999987532
Q ss_pred cCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccc
Q 002647 654 DEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTII 733 (897)
Q Consensus 654 ~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~ii 733 (897)
.......+||..|++||...+...+.+.|+|++|++.||++.|.+||+.... ..... .+... ++
T Consensus 176 ----~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~---~etYk---rI~k~-----~~- 239 (281)
T KOG0580|consen 176 ----SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSH---SETYK---RIRKV-----DL- 239 (281)
T ss_pred ----CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhh---HHHHH---HHHHc-----cc-
Confidence 2234568999999999999999999999999999999999999999974331 11111 01100 01
Q ss_pred cchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 734 DPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 734 Dp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
.++........++|.+|+..+|.+|....||++.
T Consensus 240 ------~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 240 ------KFPSTISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred ------cCCcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 1122233456889999999999999999999864
|
|
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-36 Score=339.22 Aligned_cols=250 Identities=28% Similarity=0.413 Sum_probs=206.6
Q ss_pred eeeeEEeecCceEEEEEEec--CC--CEEEEEEeeccccc-chHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 502 HTSRIIGEGGFGVVYRGILD--DG--REVAVKVLKRANQH-GGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 502 ~~~~~LG~G~fGtVyka~l~--~g--~~VAVK~lk~~~~~-~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
...++||+|.||.|++|.|+ +| -.||||.++..... ...+|++|+.+|.+|+|+|+++|+|+..+ ....+|+|.
T Consensus 113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~EL 191 (1039)
T KOG0199|consen 113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFEL 191 (1039)
T ss_pred HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhh
Confidence 35588999999999999986 34 35899999876554 56899999999999999999999999988 677899999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
++.|+|.+.|++ .....|-......++.|||.||.||..++ +|||||..+||||-....|||+||||.|.+..+.
T Consensus 192 aplGSLldrLrk--a~~~~llv~~Lcdya~QiA~aM~YLeskr---lvHRDLAARNlllasprtVKI~DFGLmRaLg~ne 266 (1039)
T KOG0199|consen 192 APLGSLLDRLRK--AKKAILLVSRLCDYAMQIAKAMQYLESKR---LVHRDLAARNLLLASPRTVKICDFGLMRALGENE 266 (1039)
T ss_pred cccchHHHHHhh--ccccceeHHHHHHHHHHHHHHHHHHhhhh---hhhhhhhhhhheecccceeeeecccceeccCCCC
Confidence 999999999986 23466888889999999999999999887 9999999999999999999999999999876555
Q ss_pred Cccccc-ccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhccccccccccccc
Q 002647 657 NKHIST-HVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIID 734 (897)
Q Consensus 657 ~~~~~t-~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiD 734 (897)
+...+. ...-.+.|+|||.+....++.+||||+|||.||||+| |..||-+-.... +.+.+|
T Consensus 267 d~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~q-----------------IL~~iD 329 (1039)
T KOG0199|consen 267 DMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQ-----------------ILKNID 329 (1039)
T ss_pred cceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHH-----------------HHHhcc
Confidence 443332 3345678999999999999999999999999999999 888886433211 111222
Q ss_pred chhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002647 735 PVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL 774 (897)
Q Consensus 735 p~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L 774 (897)
..-.-.-+..+.+.+.+|+++||..+|.+||++..|.+.+
T Consensus 330 ~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 330 AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 2222223667888999999999999999999999997544
|
|
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=298.53 Aligned_cols=249 Identities=29% Similarity=0.461 Sum_probs=203.2
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeecc
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIH 578 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~ 578 (897)
+|...+.||+|++|.||++... +++.+++|++........+++.+|++++++++|+|++++++++...+..++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 4778899999999999999975 688999999987655556789999999999999999999999999999999999999
Q ss_pred CCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCc
Q 002647 579 NGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNK 658 (897)
Q Consensus 579 gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~ 658 (897)
+++|.+++... ...+++..+..++.|++.+|.|||+.+ ++|+||+|+||++++++.++|+|||.+........
T Consensus 81 ~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 153 (253)
T cd05122 81 GGSLKDLLKST---NQTLTESQIAYVCKELLKGLEYLHSNG---IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA- 153 (253)
T ss_pred CCcHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHhhcCC---EecCCCCHHHEEEccCCeEEEeecccccccccccc-
Confidence 99999998542 256999999999999999999999987 99999999999999999999999999876543221
Q ss_pred ccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhc
Q 002647 659 HISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIE 738 (897)
Q Consensus 659 ~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~ 738 (897)
.....++..|++||++.....+.++||||||+++|+|++|+.||...... ....... ......+.+
T Consensus 154 --~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~-----~~~~~~~~~---- 219 (253)
T cd05122 154 --RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM---KALFKIA-----TNGPPGLRN---- 219 (253)
T ss_pred --ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH---HHHHHHH-----hcCCCCcCc----
Confidence 33456889999999998888899999999999999999999998643211 1100000 000111111
Q ss_pred cCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 739 SNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 739 ~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
.......+.+++.+||+.||++||++.|+++
T Consensus 220 ---~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 220 ---PEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred ---ccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1111356889999999999999999999875
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=312.66 Aligned_cols=244 Identities=27% Similarity=0.382 Sum_probs=198.9
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~ 574 (897)
++|++.+.||+|+||.||++... +++.||+|.+.... ....+.+.+|+++|++++|+||+++++++.+++..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 47889999999999999999965 68999999987532 233467889999999999999999999999999999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
||+++++|.+++.. ...+++..+..++.|++.||+|||+.+ |+|+||+|+|||+++++.+||+|||+++....
T Consensus 81 e~~~~~~L~~~~~~----~~~l~~~~~~~~~~qil~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 153 (290)
T cd05580 81 EYVPGGELFSHLRK----SGRFPEPVARFYAAQVVLALEYLHSLD---IVYRDLKPENLLLDSDGYIKITDFGFAKRVKG 153 (290)
T ss_pred ecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEeeCCCccccCC
Confidence 99999999999853 356899999999999999999999987 99999999999999999999999999886533
Q ss_pred CCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccccccccccc
Q 002647 655 EGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIID 734 (897)
Q Consensus 655 ~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiD 734 (897)
. .....+++.|+|||.+.+...+.++||||||+++|||++|+.||..... ...... .....
T Consensus 154 ~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~---~~~~~-------- 214 (290)
T cd05580 154 R-----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP---IQIYEK---ILEGK-------- 214 (290)
T ss_pred C-----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH---HHHHHH---HhcCC--------
Confidence 2 2345688999999999888889999999999999999999999964331 111110 00000
Q ss_pred chhccCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 002647 735 PVIESNISYDTLVKVAAIASMCVQPEVSHRP-----FMGEVVQ 772 (897)
Q Consensus 735 p~l~~~~~~e~~~~L~~Li~~CL~~dP~~RP-----Tm~EVl~ 772 (897)
. .++......+.+++.+||+.||.+|+ +++|+++
T Consensus 215 ~----~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 215 V----RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred c----cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 0 11112235678899999999999998 6666643
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=313.59 Aligned_cols=269 Identities=22% Similarity=0.266 Sum_probs=198.0
Q ss_pred CceeeeEEeecCceEEEEEEec---CCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecC--CceE
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD---DGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIED--NNRC 571 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~---~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~--~~~~ 571 (897)
+|.+.++||+|+||.||+|... ++..||+|.+.... ....+.+.+|++++++++|+||+++++++.+. ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4788899999999999999965 47899999998633 33446788999999999999999999999987 7889
Q ss_pred EEEeeccCCccccccccCCCCC-CCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEcc----CCceEEecc
Q 002647 572 LVYELIHNGSLESHLHGDDKVN-GPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEH----DFTPKVSDF 646 (897)
Q Consensus 572 LV~Ey~~gGSL~~~L~~~~~~~-~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~----~~~vKLsDF 646 (897)
+||||+++ +|.+++....... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999975 6666664322222 37899999999999999999999888 999999999999999 999999999
Q ss_pred CcchhcccCCC-cccccccccccccCChhhhhcC-CCCccccEEechhHHHHHHhCCCCCCCCCCCCch-------hhHH
Q 002647 647 GLARTALDEGN-KHISTHVMGTFGYLAPEYAMTG-HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQE-------NLVA 717 (897)
Q Consensus 647 GLAr~~~~~~~-~~~~t~~~GT~~Y~APE~l~~~-~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~-------~lv~ 717 (897)
|+++....... ........++..|+|||++.+. .++.++||||||+++|||++|+.||......... .+..
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99986533222 1122345678899999988764 5789999999999999999999999755433200 0000
Q ss_pred hhhhcccc----------cccccc--------ccc-chhccCCCH--HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 718 WARPLLTT----------KEGLKT--------IID-PVIESNISY--DTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 718 w~~~l~~~----------~e~l~~--------iiD-p~l~~~~~~--e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
....+-.. ...... ... ..+...... ....++.+++.+||+.||++||++.|+++
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 00000000 000000 000 000000001 23356889999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-35 Score=317.55 Aligned_cols=248 Identities=25% Similarity=0.398 Sum_probs=198.6
Q ss_pred ceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccC
Q 002647 501 FHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHN 579 (897)
Q Consensus 501 y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~g 579 (897)
|.....||+|+||.||++... ++..||||.+........+.+.+|+.++++++|+||+++++.+..++..++||||+++
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~ 103 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG 103 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence 334467999999999999964 6889999998765555567789999999999999999999999999999999999999
Q ss_pred CccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcc
Q 002647 580 GSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH 659 (897)
Q Consensus 580 GSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~ 659 (897)
++|.+++.. ..+++.+++.++.||+.||+|||+.+ |+||||||+||++++++.+||+|||++....... .
T Consensus 104 ~~L~~~~~~-----~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~--~ 173 (292)
T cd06658 104 GALTDIVTH-----TRMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV--P 173 (292)
T ss_pred CcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEccCcchhhccccc--c
Confidence 999998842 35899999999999999999999887 9999999999999999999999999987543221 1
Q ss_pred cccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhcc
Q 002647 660 ISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIES 739 (897)
Q Consensus 660 ~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~ 739 (897)
......|+..|+|||++.+..++.++||||||+++|||++|+.||....... .+.. . ...+.+.+..
T Consensus 174 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~--~~~~-~----------~~~~~~~~~~ 240 (292)
T cd06658 174 KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ--AMRR-I----------RDNLPPRVKD 240 (292)
T ss_pred cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHH-H----------HhcCCCcccc
Confidence 2233568899999999988889999999999999999999999996432211 0100 0 0011111111
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 740 NISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 740 ~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
.......+..++..|+..||.+||++.|+++.
T Consensus 241 --~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 241 --SHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred --ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 11123457789999999999999999999864
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=305.51 Aligned_cols=247 Identities=25% Similarity=0.327 Sum_probs=201.2
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccc---cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEe
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQ---HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYE 575 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~---~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~E 575 (897)
+|++.+.||.|+||.||+|... +++.||+|.+..... ...+.+.+|++++++++|+||+++++++.++...++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 5889999999999999999975 589999999975332 345689999999999999999999999999999999999
Q ss_pred eccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccC
Q 002647 576 LIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655 (897)
Q Consensus 576 y~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~ 655 (897)
|+.+++|.+++.. ...+++.++..++.|+++||.|||+.+ |+|+||||+||++++++.++|+|||++......
T Consensus 81 ~~~~~~L~~~l~~----~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 153 (258)
T cd05578 81 LLLGGDLRYHLSQ----KVKFSEEQVKFWICEIVLALEYLHSKG---IIHRDIKPDNILLDEQGHVHITDFNIATKVTPD 153 (258)
T ss_pred CCCCCCHHHHHHh----cCCcCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEEcCCCCEEEeecccccccCCC
Confidence 9999999999853 257899999999999999999999887 999999999999999999999999998765332
Q ss_pred CCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccc
Q 002647 656 GNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDP 735 (897)
Q Consensus 656 ~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp 735 (897)
. ......|+..|+|||++.+..++.++||||||+++|+|++|+.||..........+. .....
T Consensus 154 ~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~----~~~~~---------- 216 (258)
T cd05578 154 T---LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIR----AKQET---------- 216 (258)
T ss_pred c---cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHH----HHhcc----------
Confidence 2 223456888999999999888999999999999999999999999754432111111 11100
Q ss_pred hhccCCCHHHHHHHHHHHHHccCCCCCCCCCH--HHHH
Q 002647 736 VIESNISYDTLVKVAAIASMCVQPEVSHRPFM--GEVV 771 (897)
Q Consensus 736 ~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm--~EVl 771 (897)
.....+......+.+++.+||+.||.+||++ +|++
T Consensus 217 -~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 217 -ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred -ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 0011122233677899999999999999999 6654
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=314.95 Aligned_cols=255 Identities=23% Similarity=0.346 Sum_probs=198.9
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~ 574 (897)
++|++.+.||+|+||.||++... +++.||+|.+.... ....+.+.+|+++++.++|+||+++++.+..++..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 47889999999999999999965 57899999987543 223457889999999999999999999999989999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
||+++++|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 e~~~g~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~ 153 (305)
T cd05609 81 EYVEGGDCATLLKN----IGALPVDMARMYFAETVLALEYLHNYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLM 153 (305)
T ss_pred ecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHEEECCCCCEEEeeCCCccccCc
Confidence 99999999999953 346899999999999999999999887 99999999999999999999999999863211
Q ss_pred CC-------------CcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhh
Q 002647 655 EG-------------NKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARP 721 (897)
Q Consensus 655 ~~-------------~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~ 721 (897)
.. .........++..|+|||++....++.++||||||+++|||++|+.||...... .+ ...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~---~~---~~~ 227 (305)
T cd05609 154 SLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE---EL---FGQ 227 (305)
T ss_pred CccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HH---HHH
Confidence 00 001112345788999999998888999999999999999999999999643211 11 111
Q ss_pred cccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 002647 722 LLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775 (897)
Q Consensus 722 l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~ 775 (897)
.... .+..+... ......+.+|+.+||+.+|++||+..++.+.|+
T Consensus 228 ~~~~-----~~~~~~~~----~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~ 272 (305)
T cd05609 228 VISD-----DIEWPEGD----EALPADAQDLISRLLRQNPLERLGTGGAFEVKQ 272 (305)
T ss_pred HHhc-----ccCCCCcc----ccCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence 0000 00001100 112345789999999999999999766655554
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=312.50 Aligned_cols=251 Identities=26% Similarity=0.377 Sum_probs=203.0
Q ss_pred hCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
.++|.+.+.||+|+||.||++... ++..||+|.+........+.+.+|+.++++++|+||+++++++...+..++|+||
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~ 97 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEY 97 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence 367888999999999999999854 6889999998765555567789999999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
+++++|.+++.. ..+++.++..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++.......
T Consensus 98 ~~~~~L~~~~~~-----~~l~~~~~~~i~~~l~~al~~LH~~g---i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~ 169 (293)
T cd06647 98 LAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (293)
T ss_pred CCCCcHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCC---EeeccCCHHHEEEcCCCCEEEccCcceecccccc
Confidence 999999999852 35889999999999999999999988 9999999999999999999999999987543322
Q ss_pred CcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccch
Q 002647 657 NKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPV 736 (897)
Q Consensus 657 ~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~ 736 (897)
. ......++..|+|||++....++.++||||||+++|||++|+.||........ +.. ... ....
T Consensus 170 ~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~--~~~----~~~--~~~~------ 233 (293)
T cd06647 170 S--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA--LYL----IAT--NGTP------ 233 (293)
T ss_pred c--ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh--eee----hhc--CCCC------
Confidence 1 22334688899999999888899999999999999999999999964332111 000 000 0000
Q ss_pred hccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 737 IESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 737 l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
...........+.+++.+||+.+|++||++.|++.+
T Consensus 234 -~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 234 -ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred -CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000111223467889999999999999999999865
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=307.99 Aligned_cols=246 Identities=27% Similarity=0.434 Sum_probs=198.5
Q ss_pred ceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc-ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeecc
Q 002647 501 FHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIH 578 (897)
Q Consensus 501 y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~ 578 (897)
|...+.||+|+||.||+|... ++..||||.+.... ....+.+.+|++++++++|+||+++++++.+++..++||||++
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 85 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence 667789999999999999864 68899999986432 2334578899999999999999999999999999999999999
Q ss_pred CCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCc
Q 002647 579 NGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNK 658 (897)
Q Consensus 579 gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~ 658 (897)
+++|.+++.. ..+++..+..++.|++.+|.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 86 ~~~l~~~i~~-----~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~-- 155 (277)
T cd06641 86 GGSALDLLEP-----GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-- 155 (277)
T ss_pred CCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHccCC---eecCCCCHHhEEECCCCCEEEeecccceecccch--
Confidence 9999999852 35899999999999999999999987 9999999999999999999999999987543211
Q ss_pred ccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhc
Q 002647 659 HISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIE 738 (897)
Q Consensus 659 ~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~ 738 (897)
.......++..|+|||++....++.++|||||||++|||++|..||...... .... .... ...
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~---~~~~---~~~~--~~~--------- 218 (277)
T cd06641 156 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM---KVLF---LIPK--NNP--------- 218 (277)
T ss_pred hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH---HHHH---HHhc--CCC---------
Confidence 1122346788999999998888899999999999999999999998643211 1111 0000 000
Q ss_pred cCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 739 SNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 739 ~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
..........+.+++.+||+.+|.+||++.++++.
T Consensus 219 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 219 PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred CCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 01112233567889999999999999999999884
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=303.89 Aligned_cols=249 Identities=24% Similarity=0.354 Sum_probs=203.3
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc--ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN--QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
+|++.++||+|+||.||+++.. +++.+|+|.+.... .....++.+|++++++++|+||+++++++.+....++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 5788999999999999999854 68899999987532 33345788999999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
+++++|.+++.........+++..++.++.|++.||+|||+.+ ++|+||+|+||++++++.+||+|||+++.....
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~---i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK---ILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 9999999998653333457899999999999999999999888 999999999999999999999999999865432
Q ss_pred CcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccch
Q 002647 657 NKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPV 736 (897)
Q Consensus 657 ~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~ 736 (897)
......++..|++||.+.+..++.++|+||||+++|||++|+.||...+.. .+.... . ....
T Consensus 157 ---~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~---~~~~~~---~--~~~~------- 218 (256)
T cd08530 157 ---MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ---DLRYKV---Q--RGKY------- 218 (256)
T ss_pred ---CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHH---h--cCCC-------
Confidence 222345788999999999888999999999999999999999999654321 111100 0 0000
Q ss_pred hccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 737 IESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 737 l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
..........+.+++.+|++.+|++||++.|+++
T Consensus 219 --~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 219 --PPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred --CCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 1112234456889999999999999999999975
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-35 Score=315.72 Aligned_cols=266 Identities=26% Similarity=0.314 Sum_probs=200.5
Q ss_pred CceeeeEEeecCceEEEEEEe-cCCCEEEEEEeecccc--cchHHHHHHHHHHhhccCCc-eeeEeeeeecCC------c
Q 002647 500 GFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRANQ--HGGREFLAELEMLSRLHHRN-LVKLFGVCIEDN------N 569 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~~~--~~~~~f~~Ev~iL~~L~HpN-IV~Llg~~~~~~------~ 569 (897)
.|...++||+|+||+||+|+. .+|+.||+|++.-..+ .......+|+.+|++|+|+| ||+|++++...+ .
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~ 91 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK 91 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence 455667899999999999995 4789999999975433 23356789999999999999 999999998877 7
Q ss_pred eEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcc
Q 002647 570 RCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLA 649 (897)
Q Consensus 570 ~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLA 649 (897)
.++|+||++. +|.+++.........++...+..++.||++||+|||+++ |+||||||.||||+++|.+||+|||+|
T Consensus 92 l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~---IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 92 LYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG---ILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred EEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCcceEEECCCCcEeeeccchH
Confidence 8899999965 999998654322235777889999999999999999998 999999999999999999999999999
Q ss_pred hhcccCCCcccccccccccccCChhhhhcC-CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccc---
Q 002647 650 RTALDEGNKHISTHVMGTFGYLAPEYAMTG-HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTT--- 725 (897)
Q Consensus 650 r~~~~~~~~~~~t~~~GT~~Y~APE~l~~~-~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~--- 725 (897)
+...-. ....+..++|..|.|||++.+. .|+...||||+|||+.||++++.-|.+....++...+ .+.+-..
T Consensus 168 ra~~ip--~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~I--f~~lGtP~e~ 243 (323)
T KOG0594|consen 168 RAFSIP--MRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRI--FRLLGTPNEK 243 (323)
T ss_pred HHhcCC--cccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHH--HHHcCCCCcc
Confidence 965322 2234567889999999999887 7889999999999999999999888765432211111 0000000
Q ss_pred -cccccccccchh-------ccCCCH---HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 726 -KEGLKTIIDPVI-------ESNISY---DTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 726 -~e~l~~iiDp~l-------~~~~~~---e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
...+..+.+-.. ...+.. .......+++.+|++.+|.+|.+++.++.+
T Consensus 244 ~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 244 DWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 001111111000 000001 111366789999999999999999998775
|
|
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=325.93 Aligned_cols=252 Identities=26% Similarity=0.296 Sum_probs=208.6
Q ss_pred hhCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccccc---chHHHHHHHHHHhhcc-CCceeeEeeeeecCCceE
Q 002647 497 ATNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQH---GGREFLAELEMLSRLH-HRNLVKLFGVCIEDNNRC 571 (897)
Q Consensus 497 at~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~---~~~~f~~Ev~iL~~L~-HpNIV~Llg~~~~~~~~~ 571 (897)
....|.+.+.||+|.||.||+++.+ +|+.+|+|++.+.... ....+.+|+.+|++|. |+|||.+.++|+.....+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 3467888899999999999999966 5999999999765443 3458999999999998 999999999999999999
Q ss_pred EEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEcc----CCceEEeccC
Q 002647 572 LVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEH----DFTPKVSDFG 647 (897)
Q Consensus 572 LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~----~~~vKLsDFG 647 (897)
+|||++.||.|.+.|... .+++.++..++.|++.++.|||+.+ |+||||||+|+|+.. ++.+|++|||
T Consensus 113 lvmEL~~GGeLfd~i~~~-----~~sE~da~~~~~~il~av~~lH~~g---vvHrDlKpEN~L~~~~~~~~~~ik~~DFG 184 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK-----HYSERDAAGIIRQILEAVKYLHSLG---VVHRDLKPENLLLASKDEGSGRIKLIDFG 184 (382)
T ss_pred EEEEecCCchHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHHHhCC---ceeccCCHHHeeeccccCCCCcEEEeeCC
Confidence 999999999999999643 2999999999999999999999988 999999999999953 3579999999
Q ss_pred cchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccc
Q 002647 648 LARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKE 727 (897)
Q Consensus 648 LAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e 727 (897)
++..... .......+||+.|+|||++....|+..+||||+||++|.|++|..||...........+. .. +
T Consensus 185 la~~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~------~~-~ 254 (382)
T KOG0032|consen 185 LAKFIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAIL------RG-D 254 (382)
T ss_pred CceEccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHH------cC-C
Confidence 9987643 334567899999999999999999999999999999999999999997654332221110 00 0
Q ss_pred cccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 728 GLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 728 ~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
.......-........+++..|+..||.+|+++.++++.
T Consensus 255 -------~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 255 -------FDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred -------CCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 011111222334567889999999999999999999884
|
|
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=307.32 Aligned_cols=248 Identities=26% Similarity=0.418 Sum_probs=198.2
Q ss_pred CceeeeEEeecCceEEEEEEe-cCCCEEEEEEeecc-cccchHHHHHHHHHHhhcc---CCceeeEeeeeecCCceEEEE
Q 002647 500 GFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRA-NQHGGREFLAELEMLSRLH---HRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~-~~~~~~~f~~Ev~iL~~L~---HpNIV~Llg~~~~~~~~~LV~ 574 (897)
.|+..+.||+|+||.||+|.. .+++.||+|.++.. ......++.+|++++++++ |+|++++++++.++...++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 467778999999999999996 47899999998653 2334467889999999997 999999999999989999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
||+++++|.+++.. ..+++..++.++.|+++||.|||+.+ |+|+||+|+||++++++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~-----~~l~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06917 82 EYAEGGSVRTLMKA-----GPIAEKYISVIIREVLVALKYIHKVG---VIHRDIKAANILVTNTGNVKLCDFGVAALLNQ 153 (277)
T ss_pred ecCCCCcHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHHEEEcCCCCEEEccCCceeecCC
Confidence 99999999998852 36899999999999999999999888 99999999999999999999999999876543
Q ss_pred CCCcccccccccccccCChhhhhcC-CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccc
Q 002647 655 EGNKHISTHVMGTFGYLAPEYAMTG-HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTII 733 (897)
Q Consensus 655 ~~~~~~~t~~~GT~~Y~APE~l~~~-~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~ii 733 (897)
.. .......|+..|+|||++..+ .++.++||||||+++|+|++|+.||+...... ...+.. ...
T Consensus 154 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~---~~~~~~----------~~~ 218 (277)
T cd06917 154 NS--SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFR---AMMLIP----------KSK 218 (277)
T ss_pred Cc--cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhh---hhhccc----------cCC
Confidence 22 122345688999999988754 46889999999999999999999997433211 111100 000
Q ss_pred cchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 734 DPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 734 Dp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
.+.+... .....+.+++.+||+.||++||++.|+++.
T Consensus 219 ~~~~~~~---~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 219 PPRLEDN---GYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred CCCCCcc---cCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 1111111 133567889999999999999999999763
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=309.36 Aligned_cols=267 Identities=22% Similarity=0.283 Sum_probs=196.4
Q ss_pred hhCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccc-cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEE
Q 002647 497 ATNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQ-HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 497 at~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~-~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~ 574 (897)
++++|.+.+.||+|+||.||+|... +|+.||+|++..... .....+.+|++++++++|+||+++.+++..++..++||
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 4578999999999999999999864 689999999875432 23346789999999999999999999999988999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
||+. ++|.+++.. ....+.+..+..++.|++.||.|||+.+ |+|+||||+|||++.++.+||+|||+++....
T Consensus 83 e~~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 155 (291)
T cd07870 83 EYMH-TDLAQYMIQ---HPGGLHPYNVRLFMFQLLRGLAYIHGQH---ILHRDLKPQNLLISYLGELKLADFGLARAKSI 155 (291)
T ss_pred eccc-CCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEEcCCCcEEEeccccccccCC
Confidence 9996 677766642 2345788899999999999999999987 99999999999999999999999999875422
Q ss_pred CCCcccccccccccccCChhhhhcC-CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhh----------cc
Q 002647 655 EGNKHISTHVMGTFGYLAPEYAMTG-HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARP----------LL 723 (897)
Q Consensus 655 ~~~~~~~t~~~GT~~Y~APE~l~~~-~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~----------l~ 723 (897)
... ......++..|+|||++.+. .++.++||||||+++|||++|+.||+............|... +.
T Consensus 156 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (291)
T cd07870 156 PSQ--TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVS 233 (291)
T ss_pred CCC--CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhh
Confidence 211 12234578899999988754 578899999999999999999999975432111000011000 00
Q ss_pred ccccccccccc----chhccC-CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 724 TTKEGLKTIID----PVIESN-ISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 724 ~~~e~l~~iiD----p~l~~~-~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
...+....+.. ..+... -.......+.+++.+|++.||.+|||+.|++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 234 KLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred hcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 00000000000 000000 00112356778999999999999999999864
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-35 Score=316.00 Aligned_cols=246 Identities=24% Similarity=0.362 Sum_probs=198.0
Q ss_pred eeeEEeecCceEEEEEEec-CCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccCCc
Q 002647 503 TSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGS 581 (897)
Q Consensus 503 ~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~gGS 581 (897)
....||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++|+||+++++++..++..++||||+++++
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~ 104 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGA 104 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCC
Confidence 3457999999999999964 689999999976555556778999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcccc
Q 002647 582 LESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIS 661 (897)
Q Consensus 582 L~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~~~ 661 (897)
|.+++.. ..+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++....... ...
T Consensus 105 L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~--~~~ 174 (297)
T cd06659 105 LTDIVSQ-----TRLNEEQIATVCESVLQALCYLHSQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV--PKR 174 (297)
T ss_pred HHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHeEEccCCcEEEeechhHhhccccc--ccc
Confidence 9987742 45899999999999999999999887 9999999999999999999999999987543221 112
Q ss_pred cccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhccCC
Q 002647 662 THVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESNI 741 (897)
Q Consensus 662 t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~ 741 (897)
....|+..|+|||++.+..++.++||||||+++|||++|+.||...... ......... . ..... .
T Consensus 175 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~---~~~~~~~~~---~-------~~~~~--~ 239 (297)
T cd06659 175 KSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV---QAMKRLRDS---P-------PPKLK--N 239 (297)
T ss_pred cceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHhcc---C-------CCCcc--c
Confidence 3456899999999999888999999999999999999999999643221 111111100 0 00000 0
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 742 SYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 742 ~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
.......+.+++.+||+.+|++||++.||++.
T Consensus 240 ~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 240 AHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred cCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 11123457789999999999999999999874
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=308.81 Aligned_cols=262 Identities=25% Similarity=0.340 Sum_probs=196.5
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc--ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN--QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
+|+..+.||+|+||.||+|+.. +|+.||||+++... ......+.+|++++++++|+||+++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 5888999999999999999965 68999999987432 22335788999999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
+. ++|.+++... ....+++..++.++.|+++||+|||+.+ ++|+||+|+||++++++.+||+|||+++......
T Consensus 81 ~~-~~l~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~ 154 (284)
T cd07860 81 LH-QDLKKFMDAS--PLSGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 154 (284)
T ss_pred cc-cCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEeeccchhhcccCc
Confidence 96 6888888643 2356899999999999999999999887 9999999999999999999999999987543211
Q ss_pred CcccccccccccccCChhhhhcCC-CCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccc--------
Q 002647 657 NKHISTHVMGTFGYLAPEYAMTGH-LLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKE-------- 727 (897)
Q Consensus 657 ~~~~~t~~~GT~~Y~APE~l~~~~-~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e-------- 727 (897)
.......++..|+|||++.+.. ++.++||||||+++|||+||+.||...... ..+.......-....
T Consensus 155 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd07860 155 --RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--DQLFRIFRTLGTPDEVVWPGVTS 230 (284)
T ss_pred --cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHHHhCCCChhhhhhhhH
Confidence 1123345688999999876644 588999999999999999999999643321 111111100000000
Q ss_pred ------cccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 728 ------GLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 728 ------~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
.........+.. ........+.+++.+||+.||++||++.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 231 LPDYKPSFPKWARQDFSK-VVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HHHHHhhcccccccCHHH-HcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 000000000000 00112245678999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-34 Score=299.70 Aligned_cols=251 Identities=27% Similarity=0.432 Sum_probs=204.8
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccc--cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQ--HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~--~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
+|.+.+.||+|+||.||++... ++..||+|++..... ...+++.+|++++++++|+|++++++.+..+...++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 5788899999999999999965 689999999976433 4556789999999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
+++++|.+++.........+++.++..++.+++.||.|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK---ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 9999999999754333467999999999999999999999987 9999999999999999999999999987653322
Q ss_pred CcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccch
Q 002647 657 NKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPV 736 (897)
Q Consensus 657 ~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~ 736 (897)
.......|+..|+|||.+....++.++||||||+++|+|++|+.||+..... .+. ..... ....
T Consensus 158 --~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~---~~~---~~~~~--~~~~------ 221 (258)
T cd08215 158 --DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLL---ELA---LKILK--GQYP------ 221 (258)
T ss_pred --ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHH---HHH---HHHhc--CCCC------
Confidence 1233456889999999998888999999999999999999999999644311 111 11110 0000
Q ss_pred hccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 737 IESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 737 l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
..+......+.+++.+||..+|++||++.|+++
T Consensus 222 ---~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 222 ---PIPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred ---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 111233356788999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=352.36 Aligned_cols=257 Identities=22% Similarity=0.350 Sum_probs=198.8
Q ss_pred HhhCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecc--cccchHHHHHHHHHHhhccCCceeeEeeeeecC--Cce
Q 002647 496 KATNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRA--NQHGGREFLAELEMLSRLHHRNLVKLFGVCIED--NNR 570 (897)
Q Consensus 496 ~at~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~--~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~--~~~ 570 (897)
...++|.+.+.||+|+||+||+|... ++..||+|.+... .......|..|+.+|++|+|+|||+++++|... ...
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence 34578999999999999999999965 5778999998643 233346789999999999999999999988653 467
Q ss_pred EEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCC----CcEEecCCCCCcEEEccC--------
Q 002647 571 CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSS----PRVIHRDFKSSNILLEHD-------- 638 (897)
Q Consensus 571 ~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gs----p~IIHrDIKpsNILLd~~-------- 638 (897)
+|||||+++|+|.++|.........+++..++.|+.||+.||+|||..+. .+||||||||+||||+.+
T Consensus 90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~ 169 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT 169 (1021)
T ss_pred EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence 99999999999999996543334579999999999999999999998542 349999999999999642
Q ss_pred ---------CceEEeccCcchhcccCCCcccccccccccccCChhhhhc--CCCCccccEEechhHHHHHHhCCCCCCCC
Q 002647 639 ---------FTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMT--GHLLVKSDVYSYGVVLLELLTGRKPVDLS 707 (897)
Q Consensus 639 ---------~~vKLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~--~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~ 707 (897)
..+||+|||+++..... .......||+.|+|||++.. ..++.++||||||||||||+||+.||...
T Consensus 170 ~~~~n~ng~~iVKLsDFGlAr~l~~~---s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~ 246 (1021)
T PTZ00266 170 AQANNLNGRPIAKIGDFGLSKNIGIE---SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKA 246 (1021)
T ss_pred ccccccCCCCceEEccCCcccccccc---ccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcC
Confidence 34899999999764321 12234579999999999864 45789999999999999999999999643
Q ss_pred CCCCchhhHHhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 708 QPPGQENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 708 ~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
.. .......+.. . +.+. .......+.+|+..||+.+|.+||++.|++.
T Consensus 247 ~~-----~~qli~~lk~-~--------p~lp---i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 247 NN-----FSQLISELKR-G--------PDLP---IKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred Cc-----HHHHHHHHhc-C--------CCCC---cCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 21 1111111110 0 0000 0112346788999999999999999999985
|
|
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=308.13 Aligned_cols=253 Identities=26% Similarity=0.401 Sum_probs=204.2
Q ss_pred hhCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEe
Q 002647 497 ATNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYE 575 (897)
Q Consensus 497 at~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~E 575 (897)
..++|+..+.||+|+||.||+|..+ ++..|++|+++.... ..+.+.+|++++++++|+|++++++++...+..++|+|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 95 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME 95 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence 5667888899999999999999976 688999999986544 45678999999999999999999999999999999999
Q ss_pred eccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccC
Q 002647 576 LIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655 (897)
Q Consensus 576 y~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~ 655 (897)
|+++++|.+++.... ..+++..++.++.|++.||+|||+.+ |+|+||+|+||+++.++.++|+|||++......
T Consensus 96 ~~~~~~L~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~lH~~g---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 169 (286)
T cd06614 96 YMDGGSLTDIITQNF---VRMNEPQIAYVCREVLQGLEYLHSQN---VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKE 169 (286)
T ss_pred ccCCCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCChhhEEEcCCCCEEECccchhhhhccc
Confidence 999999999996421 37999999999999999999999887 999999999999999999999999998754322
Q ss_pred CCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccc
Q 002647 656 GNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDP 735 (897)
Q Consensus 656 ~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp 735 (897)
. .......++..|++||++.+..++.++||||||+++|+|++|+.||...... .....+.. .....+.+
T Consensus 170 ~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~--~~~~~~~~------~~~~~~~~- 238 (286)
T cd06614 170 K--SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL--RALFLITT------KGIPPLKN- 238 (286)
T ss_pred h--hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHh------cCCCCCcc-
Confidence 1 1223345788999999998888999999999999999999999998643221 11111100 00111000
Q ss_pred hhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 736 VIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 736 ~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
.......+.+++.+||+.+|.+||++.+|++.
T Consensus 239 ------~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 239 ------PEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred ------hhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 11123567889999999999999999999763
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-34 Score=308.25 Aligned_cols=265 Identities=22% Similarity=0.275 Sum_probs=195.4
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc--ccchHHHHHHHHHHhhcc-CCceeeEeeeeecCCc-----
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN--QHGGREFLAELEMLSRLH-HRNLVKLFGVCIEDNN----- 569 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L~-HpNIV~Llg~~~~~~~----- 569 (897)
++|++.+.||+|+||.||+|... +|+.||||.++... ......+.+|++++++++ |+||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46889999999999999999965 68999999986532 223467889999999995 6999999999887665
Q ss_pred eEEEEeeccCCccccccccCCCC-CCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEcc-CCceEEeccC
Q 002647 570 RCLVYELIHNGSLESHLHGDDKV-NGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEH-DFTPKVSDFG 647 (897)
Q Consensus 570 ~~LV~Ey~~gGSL~~~L~~~~~~-~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~-~~~vKLsDFG 647 (897)
.++||||+++ +|.+++...... ...+++..++.++.||++||+|||+.+ |+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG---VMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEecCCCeEEEeecc
Confidence 7999999985 788887643322 346899999999999999999999887 999999999999998 8999999999
Q ss_pred cchhcccCCCcccccccccccccCChhhhhc-CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccc
Q 002647 648 LARTALDEGNKHISTHVMGTFGYLAPEYAMT-GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTK 726 (897)
Q Consensus 648 LAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~-~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~ 726 (897)
+++....... ......+++.|+|||++.+ ..++.++||||||+++|||++|..||....... .+......+....
T Consensus 157 ~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~--~~~~~~~~~~~~~ 232 (295)
T cd07837 157 LGRAFSIPVK--SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQ--QLLHIFKLLGTPT 232 (295)
T ss_pred cceecCCCcc--ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHH--HHHHHHHHhCCCC
Confidence 9875432211 1223356888999998865 457899999999999999999999996432211 1110000000000
Q ss_pred c-c------ccc------cccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 727 E-G------LKT------IIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 727 e-~------l~~------iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
. . +.. .....+. ........++.+++.+||+.||.+||++.|++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 233 EQVWPGVSKLRDWHEFPQWKPQDLS-RAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred hhhCcchhhccchhhcCcccchhHH-HhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0 0 000 0000000 001123456789999999999999999999875
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-34 Score=308.01 Aligned_cols=265 Identities=23% Similarity=0.296 Sum_probs=194.8
Q ss_pred hCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccc--cchHHHHHHHHHHhhccCCceeeEeeeeecCC------
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQ--HGGREFLAELEMLSRLHHRNLVKLFGVCIEDN------ 568 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~--~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~------ 568 (897)
.++|++.++||+|+||.||+|... +++.||||.+..... .....+.+|++++++++|+||++++++|....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 357999999999999999999965 689999999864332 22345678999999999999999999987654
Q ss_pred --ceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEecc
Q 002647 569 --NRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDF 646 (897)
Q Consensus 569 --~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDF 646 (897)
..++||||+.+ +|.+++.. ....+++.+++.++.||++||+|||+.+ |+|+||||+|||++.++.+||+||
T Consensus 91 ~~~~~lv~e~~~~-~l~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~df 163 (310)
T cd07865 91 KGSFYLVFEFCEH-DLAGLLSN---KNVKFTLSEIKKVMKMLLNGLYYIHRNK---ILHRDMKAANILITKDGILKLADF 163 (310)
T ss_pred CceEEEEEcCCCc-CHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEECCCCcEEECcC
Confidence 34999999965 78877743 2346899999999999999999999987 999999999999999999999999
Q ss_pred CcchhcccCCCc--ccccccccccccCChhhhhcC-CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcc
Q 002647 647 GLARTALDEGNK--HISTHVMGTFGYLAPEYAMTG-HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLL 723 (897)
Q Consensus 647 GLAr~~~~~~~~--~~~t~~~GT~~Y~APE~l~~~-~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~ 723 (897)
|++......... .......++..|+|||++.+. .++.++||||||+++|||+||+.||...........+.......
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~ 243 (310)
T cd07865 164 GLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSI 243 (310)
T ss_pred CCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 999765332211 122334578899999988664 46889999999999999999999997544322111111110000
Q ss_pred c-----ccc------------cccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 724 T-----TKE------------GLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 724 ~-----~~e------------~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
. ... .....+...+... .....+.+|+.+||+.||++||++.|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 244 TPEVWPGVDKLELFKKMELPQGQKRKVKERLKPY---VKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred ChhhcccccchhhhhhccCCCccchhhHHhcccc---cCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 0 000 0000000000000 11245678999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=301.83 Aligned_cols=249 Identities=24% Similarity=0.364 Sum_probs=199.4
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc--ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN--QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
+|...+.||+|+||.||+|... +|..||+|.+.... ....+.+.+|++++++++|+||+++++.+......++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 5788999999999999999965 58899999986532 23446788999999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCC-ceEEeccCcchhcccC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDF-TPKVSDFGLARTALDE 655 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~-~vKLsDFGLAr~~~~~ 655 (897)
+++++|.+++... ....+++..++.++.|+++||+|||+.+ |+|+||||+||++++++ .+||+|||.+......
T Consensus 81 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (257)
T cd08225 81 CDGGDLMKRINRQ--RGVLFSEDQILSWFVQISLGLKHIHDRK---ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS 155 (257)
T ss_pred CCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEcCCCCeEEecccccchhccCC
Confidence 9999999998642 2335899999999999999999999887 99999999999999885 4699999998765332
Q ss_pred CCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccc
Q 002647 656 GNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDP 735 (897)
Q Consensus 656 ~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp 735 (897)
. .......|+..|+|||++....++.++||||||+++|||++|+.||..... ..+...... .....
T Consensus 156 ~--~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~--~~~~~---- 221 (257)
T cd08225 156 M--ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL------HQLVLKICQ--GYFAP---- 221 (257)
T ss_pred c--ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH------HHHHHHHhc--ccCCC----
Confidence 1 122334688999999999888899999999999999999999999864321 111111111 11111
Q ss_pred hhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 736 VIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 736 ~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
........+.+++.+|++.+|++||++.||++
T Consensus 222 -----~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 222 -----ISPNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred -----CCCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 11122346788999999999999999999975
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-34 Score=307.81 Aligned_cols=265 Identities=25% Similarity=0.312 Sum_probs=198.4
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccc--cchHHHHHHHHHHhhccCCceeeEeeeeecC--CceEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQ--HGGREFLAELEMLSRLHHRNLVKLFGVCIED--NNRCLV 573 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~--~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~--~~~~LV 573 (897)
++|+..+.||+|+||.||+|... +++.+|+|.++.... .....+.+|++++++++|+||+++++++... ...++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46888899999999999999975 688999999975432 2234578899999999999999999998877 789999
Q ss_pred EeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcc
Q 002647 574 YELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTAL 653 (897)
Q Consensus 574 ~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~ 653 (897)
|||+.+ +|.+++... ...+++.+++.++.||+.||+|||+.+ |+|+||||+|||+++++.+||+|||+++...
T Consensus 85 ~e~~~~-~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 157 (293)
T cd07843 85 MEYVEH-DLKSLMETM---KQPFLQSEVKCLMLQLLSGVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREYG 157 (293)
T ss_pred ehhcCc-CHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCcEEEeecCceeecc
Confidence 999974 898888532 236899999999999999999999888 9999999999999999999999999988654
Q ss_pred cCCCcccccccccccccCChhhhhcC-CCCccccEEechhHHHHHHhCCCCCCCCCCCCchh-hHH---------hhh--
Q 002647 654 DEGNKHISTHVMGTFGYLAPEYAMTG-HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQEN-LVA---------WAR-- 720 (897)
Q Consensus 654 ~~~~~~~~t~~~GT~~Y~APE~l~~~-~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~-lv~---------w~~-- 720 (897)
... .......++..|+|||++.+. .++.++||||||+++|||++|+.||.......... +.. |..
T Consensus 158 ~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (293)
T cd07843 158 SPL--KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFS 235 (293)
T ss_pred CCc--cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhh
Confidence 321 112334578899999988754 46889999999999999999999997543221110 000 100
Q ss_pred hccccc-ccccccccchhccCCCHH-HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 721 PLLTTK-EGLKTIIDPVIESNISYD-TLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 721 ~l~~~~-e~l~~iiDp~l~~~~~~e-~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
.+.... ..........+...+... ....+.+++.+||+.||++||++.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 236 ELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred ccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 000000 000111111111122211 2456788999999999999999999975
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-34 Score=304.76 Aligned_cols=264 Identities=23% Similarity=0.294 Sum_probs=198.1
Q ss_pred ceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc--ccchHHHHHHHHHHhhccCCceeeEeeeeecC--CceEEEEe
Q 002647 501 FHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN--QHGGREFLAELEMLSRLHHRNLVKLFGVCIED--NNRCLVYE 575 (897)
Q Consensus 501 y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~--~~~~LV~E 575 (897)
|++.+.||+|+||.||+|+.. +|+.+|+|++.... ....+.+.+|++++++++|+|++++++++... +..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 567899999999999999965 58899999998653 33446788999999999999999999999887 78999999
Q ss_pred eccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccC
Q 002647 576 LIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655 (897)
Q Consensus 576 y~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~ 655 (897)
|+++ +|.+++... ...+++.+++.++.||++||+|||+.+ ++|+||||+|||+++++.+||+|||++......
T Consensus 81 ~~~~-~l~~~~~~~---~~~~~~~~~~~i~~~i~~al~~LH~~~---~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~ 153 (287)
T cd07840 81 YMDH-DLTGLLDSP---EVKFTESQIKCYMKQLLEGLQYLHSNG---ILHRDIKGSNILINNDGVLKLADFGLARPYTKR 153 (287)
T ss_pred cccc-cHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEEcCCCCEEEccccceeeccCC
Confidence 9975 888888532 246899999999999999999999887 999999999999999999999999999865433
Q ss_pred CCcccccccccccccCChhhhhc-CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhh-HHhhhhcccc-ccc----
Q 002647 656 GNKHISTHVMGTFGYLAPEYAMT-GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENL-VAWARPLLTT-KEG---- 728 (897)
Q Consensus 656 ~~~~~~t~~~GT~~Y~APE~l~~-~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~l-v~w~~~l~~~-~e~---- 728 (897)
.. ...+...++..|+|||.+.+ ..++.++||||||+++|||+||+.||+.......... .......... ...
T Consensus 154 ~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07840 154 NS-ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKL 232 (287)
T ss_pred Cc-ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccc
Confidence 21 12233456889999997764 4578999999999999999999999975443211111 0000000000 000
Q ss_pred -------ccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 729 -------LKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 729 -------l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
........+...+...+...+.+++.+||+.+|.+||++.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 233 PWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred hhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 00000011111111112457889999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-35 Score=328.02 Aligned_cols=244 Identities=29% Similarity=0.403 Sum_probs=199.3
Q ss_pred ceeeeEEeecCceEEEEEEe-cCCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 501 FHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 501 y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
|.-++.||.|+||.||-|+. .+.+.||||++.-.. ....+++++||..|++|+|||+|.+.|+|..+...||||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 45567899999999999995 467889999986432 23346899999999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
|-| |-.|+|. -..++|.+.++..|..+.+.||+|||+++ .||||||+.||||.+.|.|||+|||.|-...+
T Consensus 108 ClG-SAsDlle---VhkKplqEvEIAAi~~gaL~gLaYLHS~~---~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P-- 178 (948)
T KOG0577|consen 108 CLG-SASDLLE---VHKKPLQEVEIAAITHGALQGLAYLHSHN---RIHRDIKAGNILLSEPGLVKLADFGSASIMAP-- 178 (948)
T ss_pred Hhc-cHHHHHH---HHhccchHHHHHHHHHHHHHHHHHHHHhh---HHhhhccccceEecCCCeeeeccccchhhcCc--
Confidence 954 7777763 23468999999999999999999999988 99999999999999999999999999876432
Q ss_pred CcccccccccccccCChhhhh---cCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccc
Q 002647 657 NKHISTHVMGTFGYLAPEYAM---TGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTII 733 (897)
Q Consensus 657 ~~~~~t~~~GT~~Y~APE~l~---~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~ii 733 (897)
...++||++|||||++. .+.|+-|+||||||+...||...++|+... |...-.-.+... -
T Consensus 179 ----AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnM------NAMSALYHIAQN-------e 241 (948)
T KOG0577|consen 179 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM------NAMSALYHIAQN-------E 241 (948)
T ss_pred ----hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCc------hHHHHHHHHHhc-------C
Confidence 34578999999999986 578999999999999999999999997532 222211111111 1
Q ss_pred cchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 734 DPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 734 Dp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
.|.+. ..++...+..++..||+.-|.+|||..++++.
T Consensus 242 sPtLq---s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 242 SPTLQ---SNEWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred CCCCC---CchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 12222 34667789999999999999999999988754
|
|
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-34 Score=303.44 Aligned_cols=265 Identities=23% Similarity=0.334 Sum_probs=198.5
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccc-cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeec
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQ-HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELI 577 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~-~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~ 577 (897)
+|+..+.||.|++|.||+|+.. +|..||||.++.... .....+.+|++++++++|+||+++++++...+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 5888999999999999999975 688999999875432 23456789999999999999999999999999999999999
Q ss_pred cCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCC
Q 002647 578 HNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN 657 (897)
Q Consensus 578 ~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~ 657 (897)
++ +|.+++.... ....+++..++.++.|+++||+|||+.+ |+||||||+||++++++.+||+|||+++......
T Consensus 81 ~~-~l~~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~- 154 (284)
T cd07836 81 DK-DLKKYMDTHG-VRGALDPNTVKSFTYQLLKGIAFCHENR---VLHRDLKPQNLLINKRGELKLADFGLARAFGIPV- 154 (284)
T ss_pred Cc-cHHHHHHhcC-CCCCcCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc-
Confidence 85 8888875432 2346899999999999999999999887 9999999999999999999999999997543221
Q ss_pred cccccccccccccCChhhhhcC-CCCccccEEechhHHHHHHhCCCCCCCCCCCCchh-hHHhhh-h-------cccc--
Q 002647 658 KHISTHVMGTFGYLAPEYAMTG-HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQEN-LVAWAR-P-------LLTT-- 725 (897)
Q Consensus 658 ~~~~t~~~GT~~Y~APE~l~~~-~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~-lv~w~~-~-------l~~~-- 725 (897)
.......++..|++||++.+. .++.++||||||+++|||++|+.||......+... ...... . +...
T Consensus 155 -~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07836 155 -NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPE 233 (284)
T ss_pred -cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCch
Confidence 112234578899999988654 56889999999999999999999997543321111 000000 0 0000
Q ss_pred -cccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 726 -KEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 726 -~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
........+... ..........+.+++.+|++.||.+||++.|+++
T Consensus 234 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 234 YKPTFPRYPPQDL-QQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred hcccccCCChHHH-HHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000000000000 0011122356789999999999999999999875
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-34 Score=311.46 Aligned_cols=247 Identities=29% Similarity=0.388 Sum_probs=195.2
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccc---cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQ---HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~---~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~ 574 (897)
..|...++||+|+||+||+|+.. +|+.||+|.+..... ...+++.+|+++++.++|+||+++.++|..++..++||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 45888899999999999999965 689999999864332 23356889999999999999999999999999999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
||+. |+|.+++.. ....+++.++..++.|++.||.|||+.+ |+||||+|+||++++++.+||+|||++.....
T Consensus 95 e~~~-g~l~~~~~~---~~~~l~~~~~~~~~~ql~~~L~~LH~~~---i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~ 167 (307)
T cd06607 95 EYCL-GSASDILEV---HKKPLQEVEIAAICHGALQGLAYLHSHE---RIHRDIKAGNILLTEPGTVKLADFGSASLVSP 167 (307)
T ss_pred HhhC-CCHHHHHHH---cccCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEECCCCCEEEeecCcceecCC
Confidence 9997 577776642 2346999999999999999999999887 99999999999999999999999999875422
Q ss_pred CCCcccccccccccccCChhhhh---cCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccc
Q 002647 655 EGNKHISTHVMGTFGYLAPEYAM---TGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKT 731 (897)
Q Consensus 655 ~~~~~~~t~~~GT~~Y~APE~l~---~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~ 731 (897)
. ....++..|+|||++. ...++.++||||||+++|||+||+.||...... ..... ... ...
T Consensus 168 ~------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~---~~~~~---~~~--~~~-- 231 (307)
T cd06607 168 A------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM---SALYH---IAQ--NDS-- 231 (307)
T ss_pred C------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHH---HHHHH---Hhc--CCC--
Confidence 1 2346788999999874 456788999999999999999999998643211 11000 000 000
Q ss_pred cccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002647 732 IIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL 774 (897)
Q Consensus 732 iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L 774 (897)
+.+ ........+.+++.+||+.+|++||++.+|+...
T Consensus 232 ---~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 268 (307)
T cd06607 232 ---PTL---SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHR 268 (307)
T ss_pred ---CCC---CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence 000 0112345688999999999999999999998753
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-34 Score=307.60 Aligned_cols=247 Identities=23% Similarity=0.379 Sum_probs=199.1
Q ss_pred ceeeeEEeecCceEEEEEEe-cCCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccC
Q 002647 501 FHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHN 579 (897)
Q Consensus 501 y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~g 579 (897)
|...++||+|++|.||++.. .+++.+++|+++.......+.+.+|+.++++++|+||+++++++...+..++|+||+++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence 44457999999999999995 46889999998765555556789999999999999999999999999999999999999
Q ss_pred CccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcc
Q 002647 580 GSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH 659 (897)
Q Consensus 580 GSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~ 659 (897)
++|.+++.. ..+++.+++.++.|++.||+|||+.+ |+||||||+||+++.++.++|+|||++....... .
T Consensus 101 ~~L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~--~ 170 (285)
T cd06648 101 GALTDIVTH-----TRMNEEQIATVCLAVLKALSFLHAQG---VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV--P 170 (285)
T ss_pred CCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChhhEEEcCCCcEEEcccccchhhccCC--c
Confidence 999999853 45899999999999999999999988 9999999999999999999999999887543221 1
Q ss_pred cccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhcc
Q 002647 660 ISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIES 739 (897)
Q Consensus 660 ~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~ 739 (897)
......|+..|+|||++.+..++.++||||||+++|||++|+.||...+.. .+....... ..+.+..
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~------~~~~~~~~~-------~~~~~~~ 237 (285)
T cd06648 171 RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL------QAMKRIRDN-------LPPKLKN 237 (285)
T ss_pred ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHH------HHHHHHHhc-------CCCCCcc
Confidence 122356889999999998888999999999999999999999998643221 111111100 0001110
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 740 NISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 740 ~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
.......+.+++.+||+.+|++||++.|+++
T Consensus 238 --~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 238 --LHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred --cccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 1112356889999999999999999999975
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-34 Score=303.56 Aligned_cols=258 Identities=23% Similarity=0.296 Sum_probs=193.2
Q ss_pred ceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc-ccchHHHHHHHHHHhhcc-CCceeeEeeeeecC--CceEEEEe
Q 002647 501 FHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN-QHGGREFLAELEMLSRLH-HRNLVKLFGVCIED--NNRCLVYE 575 (897)
Q Consensus 501 y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~-HpNIV~Llg~~~~~--~~~~LV~E 575 (897)
|++.++||+|+||.||+|... +++.||+|+++... ........+|+.++.++. |+|++++++++.+. +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 567899999999999999954 68999999987532 222334568999999985 99999999999987 88999999
Q ss_pred eccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccC
Q 002647 576 LIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655 (897)
Q Consensus 576 y~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~ 655 (897)
|++ |+|.+++... ...+++.+++.++.|++.||+|||+.+ |+||||||+||+++. +.+||+|||+++.....
T Consensus 81 ~~~-~~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~ 152 (282)
T cd07831 81 LMD-MNLYELIKGR---KRPLPEKRVKSYMYQLLKSLDHMHRNG---IFHRDIKPENILIKD-DILKLADFGSCRGIYSK 152 (282)
T ss_pred cCC-ccHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEcC-CCeEEEecccccccccC
Confidence 997 5888887532 346899999999999999999999987 999999999999999 99999999999865322
Q ss_pred CCcccccccccccccCChhhhhc-CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccc-cc------
Q 002647 656 GNKHISTHVMGTFGYLAPEYAMT-GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTT-KE------ 727 (897)
Q Consensus 656 ~~~~~~t~~~GT~~Y~APE~l~~-~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~-~e------ 727 (897)
. ......++..|+|||++.. ..++.++|||||||++|||++|+.||...+. ...+.+....... .+
T Consensus 153 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 226 (282)
T cd07831 153 P---PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNE---LDQIAKIHDVLGTPDAEVLKKF 226 (282)
T ss_pred C---CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCH---HHHHHHHHHHcCCCCHHHHHhh
Confidence 1 1223467889999997654 5568899999999999999999999965432 1122221111100 00
Q ss_pred ---cccccccch-hc---cCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 728 ---GLKTIIDPV-IE---SNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 728 ---~l~~iiDp~-l~---~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
.......+. .. ..........+.+|+.+||+.+|++||++.|+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 227 RKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred cccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 000000000 00 0001123567899999999999999999999875
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=302.23 Aligned_cols=246 Identities=27% Similarity=0.400 Sum_probs=195.3
Q ss_pred EeecCceEEEEEEec-CCCEEEEEEeecccc---cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccCCcc
Q 002647 507 IGEGGFGVVYRGILD-DGREVAVKVLKRANQ---HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSL 582 (897)
Q Consensus 507 LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~---~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~gGSL 582 (897)
||+|+||.||+++.. +|+.+|+|.+..... ...+.+.+|++++++++|+||+++++.+..+...++||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999976 489999999875432 3456788999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCC-----
Q 002647 583 ESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN----- 657 (897)
Q Consensus 583 ~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~----- 657 (897)
.+++... ..+++..++.++.||++||+|||+.+ |+|+||+|+||++++++.+||+|||++........
T Consensus 81 ~~~l~~~----~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 153 (265)
T cd05579 81 ASLLENV----GSLDEDVARIYIAEIVLALEYLHSNG---IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLND 153 (265)
T ss_pred HHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHcC---eecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccc
Confidence 9998532 36899999999999999999999888 99999999999999999999999999875433211
Q ss_pred -cccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccch
Q 002647 658 -KHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPV 736 (897)
Q Consensus 658 -~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~ 736 (897)
........++..|++||+......+.++||||||+++|||++|+.||...... ..... .... .. .
T Consensus 154 ~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~---~~~~~---~~~~--~~----~-- 219 (265)
T cd05579 154 DEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE---EIFQN---ILNG--KI----E-- 219 (265)
T ss_pred ccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH---HHHHH---HhcC--Cc----C--
Confidence 11223456788999999998888899999999999999999999999644321 11111 1100 00 0
Q ss_pred hccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 002647 737 IESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775 (897)
Q Consensus 737 l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~ 775 (897)
... .......+.+++.+||+.+|++||++.+|.+.|+
T Consensus 220 ~~~--~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 220 WPE--DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred CCc--cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 000 0012456789999999999999999966665553
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-34 Score=304.69 Aligned_cols=261 Identities=25% Similarity=0.333 Sum_probs=195.8
Q ss_pred ceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc--ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeec
Q 002647 501 FHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN--QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELI 577 (897)
Q Consensus 501 y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~ 577 (897)
|++.+.||.|++|.||+|... +|..||+|++.... ......+.+|++++++++|+|++++++++.+++..++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 567789999999999999964 79999999987533 223357889999999999999999999999999999999999
Q ss_pred cCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCC
Q 002647 578 HNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN 657 (897)
Q Consensus 578 ~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~ 657 (897)
. ++|.+++.... ...+++..+++++.|+++||+|||+.+ ++||||+|+||+++.++.++|+|||+++......
T Consensus 81 ~-~~l~~~~~~~~--~~~~~~~~~~~~~~~i~~~L~~lH~~~---~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~- 153 (283)
T cd07835 81 D-LDLKKYMDSSP--LTGLDPPLIKSYLYQLLQGIAYCHSHR---VLHRDLKPQNLLIDREGALKLADFGLARAFGVPV- 153 (283)
T ss_pred C-cCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCcEEEeecccccccCCCc-
Confidence 5 68999885422 246899999999999999999999887 9999999999999999999999999987542221
Q ss_pred cccccccccccccCChhhhhcC-CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccc---------
Q 002647 658 KHISTHVMGTFGYLAPEYAMTG-HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKE--------- 727 (897)
Q Consensus 658 ~~~~t~~~GT~~Y~APE~l~~~-~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e--------- 727 (897)
.......++..|+|||++.+. .++.++||||||+++|||++|+.||...... ..+....+......+
T Consensus 154 -~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd07835 154 -RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEI--DQLFRIFRTLGTPDEDVWPGVTSL 230 (283)
T ss_pred -cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCChHHhhhhhhc
Confidence 112233568899999987654 5688999999999999999999999654321 111111110000000
Q ss_pred -----cccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 728 -----GLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 728 -----~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
........... .........+.+++.+|++.+|++||++.||++
T Consensus 231 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 231 PDYKPTFPKWARQDLS-KVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhhhhhcccccccchh-hhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 00000000000 011122256789999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-34 Score=300.02 Aligned_cols=242 Identities=24% Similarity=0.313 Sum_probs=193.8
Q ss_pred EeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccCCcc
Q 002647 507 IGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSL 582 (897)
Q Consensus 507 LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~gGSL 582 (897)
||.|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++|+||+++++++.++...++|+||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999975 58899999987532 23346799999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCccccc
Q 002647 583 ESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIST 662 (897)
Q Consensus 583 ~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~~~t 662 (897)
.+++.. ...+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.+||+|||+++...... ...
T Consensus 81 ~~~l~~----~~~l~~~~~~~~~~~i~~~l~~lH~~~---~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---~~~ 150 (262)
T cd05572 81 WTILRD----RGLFDEYTARFYIACVVLAFEYLHNRG---IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KTW 150 (262)
T ss_pred HHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEEcCCCCEEEeeCCcccccCccc---ccc
Confidence 999953 245899999999999999999999887 9999999999999999999999999998653321 223
Q ss_pred ccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhccCCC
Q 002647 663 HVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESNIS 742 (897)
Q Consensus 663 ~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~ 742 (897)
...++..|++||.+....++.++||||||+++|||++|+.||....... ......... ......++
T Consensus 151 ~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~~----------~~~~~~~~ 216 (262)
T cd05572 151 TFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP----MEIYNDILK----------GNGKLEFP 216 (262)
T ss_pred cccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH----HHHHHHHhc----------cCCCCCCC
Confidence 3468889999999988889999999999999999999999997543211 111111110 00011112
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 002647 743 YDTLVKVAAIASMCVQPEVSHRPF-----MGEVVQ 772 (897)
Q Consensus 743 ~e~~~~L~~Li~~CL~~dP~~RPT-----m~EVl~ 772 (897)
......+.+++.+||+.+|++||+ ++|+++
T Consensus 217 ~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 217 NYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred cccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 222457889999999999999999 666544
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-34 Score=314.78 Aligned_cols=264 Identities=26% Similarity=0.352 Sum_probs=196.4
Q ss_pred hCCceeeeEEeecCceEEEEEEe-cCCCEEEEEEeeccc-ccchHHHHHHHHHHhhccCCceeeEeeeeecCC-----ce
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDN-----NR 570 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~-----~~ 570 (897)
+++|.+.++||+|+||.||+|+. .+|+.||||.++... ......+.+|+.++++++|+||+++++++.... ..
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 57899999999999999999995 468999999987432 233456889999999999999999999876543 47
Q ss_pred EEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcch
Q 002647 571 CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR 650 (897)
Q Consensus 571 ~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr 650 (897)
++|+||+.+ +|.+++. ...+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 84 ~lv~e~~~~-~l~~~~~-----~~~l~~~~~~~i~~ql~~aL~~LH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~ 154 (336)
T cd07849 84 YIVQELMET-DLYKLIK-----TQHLSNDHIQYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTNCDLKICDFGLAR 154 (336)
T ss_pred EEEehhccc-CHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEECccccee
Confidence 999999975 7877774 246999999999999999999999988 9999999999999999999999999987
Q ss_pred hcccCCC-cccccccccccccCChhhhhc-CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccc--c
Q 002647 651 TALDEGN-KHISTHVMGTFGYLAPEYAMT-GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTT--K 726 (897)
Q Consensus 651 ~~~~~~~-~~~~t~~~GT~~Y~APE~l~~-~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~--~ 726 (897)
....... ........|+..|+|||++.+ ..++.++|||||||++|||++|+.||...+.. ....+....+.. .
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~---~~~~~~~~~~~~~~~ 231 (336)
T cd07849 155 IADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYL---HQLNLILGVLGTPSQ 231 (336)
T ss_pred eccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHcCCCCH
Confidence 6432211 112233568999999998764 46789999999999999999999999643211 111111110100 0
Q ss_pred ccccccccchh---------ccCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 727 EGLKTIIDPVI---------ESNIS-----YDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 727 e~l~~iiDp~l---------~~~~~-----~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
+....+.+... ..... ......+.+++.+||+.+|++||++.|+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 232 EDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11111111000 00000 1123567899999999999999999999875
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=314.27 Aligned_cols=264 Identities=24% Similarity=0.343 Sum_probs=197.5
Q ss_pred hhCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecc--cccchHHHHHHHHHHhhccCCceeeEeeeeecC------
Q 002647 497 ATNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRA--NQHGGREFLAELEMLSRLHHRNLVKLFGVCIED------ 567 (897)
Q Consensus 497 at~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~--~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~------ 567 (897)
..++|+..+.||+|+||.||+|... +|+.||||++... .......+.+|++++++++|+||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4578999999999999999999954 7899999998642 233345678899999999999999999988643
Q ss_pred CceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccC
Q 002647 568 NNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFG 647 (897)
Q Consensus 568 ~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFG 647 (897)
...++||||+. ++|.+.+.. .+++..+..++.|++.||+|||..+ |+||||||+|||++.++.+||+|||
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~------~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nil~~~~~~~kL~Dfg 163 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQM------DLDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 163 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCc
Confidence 34699999996 488887732 2889999999999999999999987 9999999999999999999999999
Q ss_pred cchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCch-hhHH--------h
Q 002647 648 LARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQE-NLVA--------W 718 (897)
Q Consensus 648 LAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~-~lv~--------w 718 (897)
+++..... .......++..|+|||.+.+..++.++|||||||++|+|++|+.||...+..... .+.. |
T Consensus 164 ~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 240 (353)
T cd07850 164 LARTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEF 240 (353)
T ss_pred cceeCCCC---CCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence 99764321 1123346788999999999999999999999999999999999999654321100 0000 0
Q ss_pred h-------hhccccc-----ccccccccchh----ccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 719 A-------RPLLTTK-----EGLKTIIDPVI----ESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 719 ~-------~~l~~~~-----e~l~~iiDp~l----~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
. ....... .....++...+ ...........+.+++.+||+.||++||++.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 241 MSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 0000000 00001111000 000011234567899999999999999999999864
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-34 Score=305.84 Aligned_cols=255 Identities=25% Similarity=0.408 Sum_probs=193.1
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc-ccchHHHHHHHHHHhhcc-CCceeeEeeeeecCCceEEEEee
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN-QHGGREFLAELEMLSRLH-HRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~-HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
+|...++||+|+||.||++... +++.||+|.+.... ......+.+|+.++.++. |+||+++++++..+...+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 3445678999999999999964 68999999987533 234457889999999996 99999999999998899999999
Q ss_pred ccCCcccccccc-CCCCCCCCCHHHHHHHHHHHHHHHhhhhcc-CCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 577 IHNGSLESHLHG-DDKVNGPLDWDARMKIALGAARGLAYLHED-SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 577 ~~gGSL~~~L~~-~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~-gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
+.. +|.++... .......+++..+..++.|++.||+|||+. + |+||||||+|||++.++.+||+|||+++....
T Consensus 85 ~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd06616 85 MDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK---IIHRDVKPSNILLDRNGNIKLCDFGISGQLVD 160 (288)
T ss_pred ccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC---eeccCCCHHHEEEccCCcEEEeecchhHHhcc
Confidence 864 54443211 011235699999999999999999999975 5 99999999999999999999999999976532
Q ss_pred CCCcccccccccccccCChhhhhcC---CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccc
Q 002647 655 EGNKHISTHVMGTFGYLAPEYAMTG---HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKT 731 (897)
Q Consensus 655 ~~~~~~~t~~~GT~~Y~APE~l~~~---~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~ 731 (897)
.. ......|+..|+|||++... .++.++|||||||++|||++|+.||.... ....-.......
T Consensus 161 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~~~~~~~~~------ 226 (288)
T cd06616 161 SI---AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN-----SVFDQLTQVVKG------ 226 (288)
T ss_pred CC---ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc-----hHHHHHhhhcCC------
Confidence 21 12334688999999998766 68899999999999999999999996432 111101110000
Q ss_pred cccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 732 IIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 732 iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
..+.+...........+.+++.+||+.+|++||++.||++.
T Consensus 227 -~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 227 -DPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred -CCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00111111122344578899999999999999999999764
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-34 Score=326.09 Aligned_cols=262 Identities=24% Similarity=0.311 Sum_probs=201.7
Q ss_pred CceeeeEEeecCceEEEEEEe-cCCCEEEEEEeecccccchHHHHHHHHHHhhcc-C-----CceeeEeeeeecCCceEE
Q 002647 500 GFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRANQHGGREFLAELEMLSRLH-H-----RNLVKLFGVCIEDNNRCL 572 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~-H-----pNIV~Llg~~~~~~~~~L 572 (897)
+|++.++||+|.||.|-+|.. ++++.||||++++.... .++-..|+.+|..|+ | -|+|+++++|...++.||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f-~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRF-LRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHH-HHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 789999999999999999995 57999999999865432 355678999999997 4 489999999999999999
Q ss_pred EEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccC--CceEEeccCcch
Q 002647 573 VYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHD--FTPKVSDFGLAR 650 (897)
Q Consensus 573 V~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~--~~vKLsDFGLAr 650 (897)
|+|.+.. +|+++|+... -..|+...+..|+.||+.||..||+.+ |||+||||+||||.+- ..|||+|||.+.
T Consensus 266 VfELL~~-NLYellK~n~--f~Glsl~~ir~~~~Qil~~L~~L~~l~---IIHcDLKPENILL~~~~r~~vKVIDFGSSc 339 (586)
T KOG0667|consen 266 VFELLST-NLYELLKNNK--FRGLSLPLVRKFAQQILTALLFLHELG---IIHCDLKPENILLKDPKRSRIKVIDFGSSC 339 (586)
T ss_pred eehhhhh-hHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCChhheeeccCCcCceeEEeccccc
Confidence 9999965 9999997643 345999999999999999999999988 9999999999999643 479999999998
Q ss_pred hcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHH--------h----
Q 002647 651 TALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVA--------W---- 718 (897)
Q Consensus 651 ~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~--------w---- 718 (897)
.... ... ....+..|.|||++.+.+|+.+.||||||||+.||++|.+-|.+.+..++...+. |
T Consensus 340 ~~~q----~vy-tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~ 414 (586)
T KOG0667|consen 340 FESQ----RVY-TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDT 414 (586)
T ss_pred ccCC----cce-eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 6422 222 4567889999999999999999999999999999999987776554433322220 0
Q ss_pred ---hhhcccc-ccccc-----c-----------------cccchhc-------cCCCHHHHHHHHHHHHHccCCCCCCCC
Q 002647 719 ---ARPLLTT-KEGLK-----T-----------------IIDPVIE-------SNISYDTLVKVAAIASMCVQPEVSHRP 765 (897)
Q Consensus 719 ---~~~l~~~-~e~l~-----~-----------------iiDp~l~-------~~~~~e~~~~L~~Li~~CL~~dP~~RP 765 (897)
...++.. ..... . ..+.... .......-..+++++++|++.||.+|+
T Consensus 415 ~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~ 494 (586)
T KOG0667|consen 415 AKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERI 494 (586)
T ss_pred ccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcC
Confidence 0111111 00000 0 0000000 011123446789999999999999999
Q ss_pred CHHHHHHH
Q 002647 766 FMGEVVQA 773 (897)
Q Consensus 766 Tm~EVl~~ 773 (897)
|..|.++.
T Consensus 495 tp~qal~H 502 (586)
T KOG0667|consen 495 TPAQALNH 502 (586)
T ss_pred CHHHHhcC
Confidence 99998764
|
|
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=310.04 Aligned_cols=248 Identities=29% Similarity=0.393 Sum_probs=195.7
Q ss_pred ceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccc---cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 501 FHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQ---HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 501 y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~---~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
|...+.||+|+||.||+|+.. ++..||+|.+..... ....++.+|++++++++|+|++++++++.+++..++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 667789999999999999964 688999999864322 2235788999999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
+. |+|.+++.. ....+++.++..++.|++.||.|||+.+ |+||||+|+||+++.++.+||+|||++.....
T Consensus 107 ~~-g~l~~~~~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~~---i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~-- 177 (317)
T cd06635 107 CL-GSASDLLEV---HKKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASIASP-- 177 (317)
T ss_pred CC-CCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcccEEECCCCCEEEecCCCccccCC--
Confidence 97 477777642 2356999999999999999999999887 99999999999999999999999999875322
Q ss_pred CcccccccccccccCChhhhh---cCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccc
Q 002647 657 NKHISTHVMGTFGYLAPEYAM---TGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTII 733 (897)
Q Consensus 657 ~~~~~t~~~GT~~Y~APE~l~---~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~ii 733 (897)
.....|+..|+|||++. .+.++.++|||||||++|||++|+.||...... ..+..+... ..
T Consensus 178 ----~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--~~~~~~~~~------~~---- 241 (317)
T cd06635 178 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--SALYHIAQN------ES---- 241 (317)
T ss_pred ----cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH--HHHHHHHhc------cC----
Confidence 12346888999999874 456889999999999999999999998643211 111111100 00
Q ss_pred cchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 002647 734 DPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLV 777 (897)
Q Consensus 734 Dp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l 777 (897)
...........+.+++.+||+.+|.+||++.||++.+..+
T Consensus 242 ----~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~ 281 (317)
T cd06635 242 ----PTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVL 281 (317)
T ss_pred ----CCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhh
Confidence 0001112335678999999999999999999999876543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=294.81 Aligned_cols=247 Identities=29% Similarity=0.454 Sum_probs=201.1
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccc--cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQ--HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~--~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
+|++.+.||+|++|.||+++.. +++.|++|.+..... ...+.+.+|++++++++|+|++++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4778899999999999999865 678999999976543 3456799999999999999999999999998999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
+++++|.+++.. ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~L~~~~~~----~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (254)
T cd06627 81 AENGSLRQIIKK----FGPFPESLVAVYVYQVLQGLAYLHEQG---VIHRDIKAANILTTKDGVVKLADFGVATKLNDVS 153 (254)
T ss_pred CCCCcHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEECCCCCEEEeccccceecCCCc
Confidence 999999999853 257999999999999999999999887 9999999999999999999999999998654322
Q ss_pred CcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccch
Q 002647 657 NKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPV 736 (897)
Q Consensus 657 ~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~ 736 (897)
. ......++..|+|||++.....+.++|||+||+++|+|++|+.||..... ... .|... . ....
T Consensus 154 ~--~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~--~~~--~~~~~-~---~~~~------ 217 (254)
T cd06627 154 K--DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP--MAA--LFRIV-Q---DDHP------ 217 (254)
T ss_pred c--cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH--HHH--HHHHh-c---cCCC------
Confidence 1 12345688999999998888889999999999999999999999864321 111 11100 0 0000
Q ss_pred hccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 737 IESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 737 l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
..+......+.+++.+||+.+|++||++.|++.
T Consensus 218 ---~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 218 ---PLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred ---CCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 111222456789999999999999999999874
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=298.92 Aligned_cols=250 Identities=22% Similarity=0.329 Sum_probs=195.7
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecc-----cccchHHHHHHHHHHhhccCCceeeEeeeeecC--Cce
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRA-----NQHGGREFLAELEMLSRLHHRNLVKLFGVCIED--NNR 570 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~-----~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~--~~~ 570 (897)
.+|++.+.||+|+||.||+|... ++..||+|.+... .......+.+|++++++++|+||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 47889999999999999999964 6899999987532 122335788999999999999999999998764 457
Q ss_pred EEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcch
Q 002647 571 CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR 650 (897)
Q Consensus 571 ~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr 650 (897)
++|+||+++++|.+++.. ...+++....+++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||+++
T Consensus 82 ~~v~e~~~~~~L~~~~~~----~~~l~~~~~~~~~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~ 154 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKA----YGALTENVTRRYTRQILQGVSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASK 154 (264)
T ss_pred EEEEEeCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcccccc
Confidence 899999999999999853 345889999999999999999999888 9999999999999999999999999998
Q ss_pred hcccCCC-cccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccc
Q 002647 651 TALDEGN-KHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGL 729 (897)
Q Consensus 651 ~~~~~~~-~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l 729 (897)
....... ........++..|+|||++.+..++.++|||||||++|||++|+.||...... ...... .
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~----~------ 222 (264)
T cd06653 155 RIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM--AAIFKI----A------ 222 (264)
T ss_pred ccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH--HHHHHH----H------
Confidence 6432111 11122356889999999999888899999999999999999999999643211 111110 0
Q ss_pred cccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 730 KTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 730 ~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
........+......+.+++.+|++ ++..||+..+++.
T Consensus 223 ----~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 223 ----TQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred ----cCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 0000111223334568889999999 5799999998764
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-33 Score=298.18 Aligned_cols=260 Identities=25% Similarity=0.313 Sum_probs=194.6
Q ss_pred ceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccc--cchHHHHHHHHHHhhc---cCCceeeEeeeeecCCc-----
Q 002647 501 FHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQ--HGGREFLAELEMLSRL---HHRNLVKLFGVCIEDNN----- 569 (897)
Q Consensus 501 y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~--~~~~~f~~Ev~iL~~L---~HpNIV~Llg~~~~~~~----- 569 (897)
|++.+.||+|+||.||+|+.+ +++.||+|+++.... .....+.+|+++++++ +|+|++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567899999999999999976 489999999974322 2234577788887766 59999999999988776
Q ss_pred eEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcc
Q 002647 570 RCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLA 649 (897)
Q Consensus 570 ~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLA 649 (897)
.+++|||+.+ +|.+++.... ...+++..++.++.|+++||+|||+.+ |+|+||+++||+++.++.+||+|||++
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~--~~~l~~~~~~~~~~~i~~al~~LH~~~---i~h~~l~~~nili~~~~~~~l~dfg~~ 154 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCP--KPGLPPETIKDLMRQLLRGVDFLHSHR---IVHRDLKPQNILVTSDGQVKIADFGLA 154 (287)
T ss_pred eEEEehhccc-CHHHHHHHcc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhEEEccCCCEEEeccCcc
Confidence 8999999974 8888885422 235899999999999999999999987 999999999999999999999999998
Q ss_pred hhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccc----
Q 002647 650 RTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTT---- 725 (897)
Q Consensus 650 r~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~---- 725 (897)
........ .....++..|+|||++.+..++.++||||||+++|||++|+.||...... ..+..+.......
T Consensus 155 ~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 229 (287)
T cd07838 155 RIYSFEMA---LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA--DQLDKIFDVIGLPSEEE 229 (287)
T ss_pred eeccCCcc---cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChH--HHHHHHHHHcCCCChHh
Confidence 76532211 12345788999999999989999999999999999999999998753321 1111111100000
Q ss_pred --------cccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 726 --------KEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 726 --------~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
............ .....+....+.+++.+||+.||++||++.|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 230 WPRNVSLPRSSFPSYTPRSF-KSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred cCCCcccchhhcccccccch-hhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 000000000000 0111233456788999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=302.37 Aligned_cols=266 Identities=21% Similarity=0.292 Sum_probs=195.2
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc--ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEe
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN--QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYE 575 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~E 575 (897)
++|++.+.||+|++|+||+|... +|+.||+|.+.... ....+.+.+|++++++++|+||+++++++...+..++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 57899999999999999999965 68899999986532 2234578899999999999999999999999999999999
Q ss_pred eccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEcc-CCceEEeccCcchhccc
Q 002647 576 LIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEH-DFTPKVSDFGLARTALD 654 (897)
Q Consensus 576 y~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~-~~~vKLsDFGLAr~~~~ 654 (897)
|++ ++|.+++... ....+++..+..++.||+.||+|||+.+ |+||||||+||+++. ++.+||+|||++.....
T Consensus 82 ~~~-~~l~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~ 155 (294)
T PLN00009 82 YLD-LDLKKHMDSS--PDFAKNPRLIKTYLYQILRGIAYCHSHR---VLHRDLKPQNLLIDRRTNALKLADFGLARAFGI 155 (294)
T ss_pred ccc-ccHHHHHHhC--CCCCcCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCcceEEEECCCCEEEEcccccccccCC
Confidence 996 5787777432 2234678888999999999999999887 999999999999985 56799999999975432
Q ss_pred CCCcccccccccccccCChhhhhcC-CCCccccEEechhHHHHHHhCCCCCCCCCCCCch-hhHHhhhhccc----cccc
Q 002647 655 EGNKHISTHVMGTFGYLAPEYAMTG-HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQE-NLVAWARPLLT----TKEG 728 (897)
Q Consensus 655 ~~~~~~~t~~~GT~~Y~APE~l~~~-~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~-~lv~w~~~l~~----~~e~ 728 (897)
. ....+...++..|+|||++.+. .++.++||||||+++|+|+||+.||......+.. ....+...... ....
T Consensus 156 ~--~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (294)
T PLN00009 156 P--VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTS 233 (294)
T ss_pred C--ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccc
Confidence 1 1122334678899999988764 5789999999999999999999999654321111 01010000000 0000
Q ss_pred cccc-------ccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 729 LKTI-------IDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 729 l~~i-------iDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
+... ...... ........++.+++.+|++.+|++||++.|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 234 LPDYKSAFPKWPPKDLA-TVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred chhhhhhcccCCCCCHH-HhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 000000 0011223457889999999999999999999763
|
|
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=302.92 Aligned_cols=242 Identities=28% Similarity=0.371 Sum_probs=186.4
Q ss_pred EEeecCceEEEEEEec-CCCEEEEEEeecccc---cchHHHHHHHHHHhh---ccCCceeeEeeeeecCCceEEEEeecc
Q 002647 506 IIGEGGFGVVYRGILD-DGREVAVKVLKRANQ---HGGREFLAELEMLSR---LHHRNLVKLFGVCIEDNNRCLVYELIH 578 (897)
Q Consensus 506 ~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~---~~~~~f~~Ev~iL~~---L~HpNIV~Llg~~~~~~~~~LV~Ey~~ 578 (897)
+||+|+||.||++... +++.+|+|.+..... .....+.+|..+++. .+|+|++.+++++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999964 689999999865321 122334555544443 479999999999999899999999999
Q ss_pred CCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCc
Q 002647 579 NGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNK 658 (897)
Q Consensus 579 gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~ 658 (897)
+|+|.+++.. ...+++.++..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||++......
T Consensus 81 ~~~L~~~i~~----~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~--- 150 (279)
T cd05633 81 GGDLHYHLSQ----HGVFSEKEMRFYATEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKK--- 150 (279)
T ss_pred CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---cCCCCCCHHHEEECCCCCEEEccCCcceecccc---
Confidence 9999998853 346999999999999999999999988 999999999999999999999999998754221
Q ss_pred ccccccccccccCChhhhhc-CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchh
Q 002647 659 HISTHVMGTFGYLAPEYAMT-GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVI 737 (897)
Q Consensus 659 ~~~t~~~GT~~Y~APE~l~~-~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l 737 (897)
......|+..|+|||.+.+ ..++.++|||||||++|||++|+.||..........+... ... .+
T Consensus 151 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~---~~~--------~~--- 215 (279)
T cd05633 151 -KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM---TLT--------VN--- 215 (279)
T ss_pred -CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHH---hhc--------CC---
Confidence 1123468999999998864 5578999999999999999999999975433221111110 000 00
Q ss_pred ccCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 002647 738 ESNISYDTLVKVAAIASMCVQPEVSHRP-----FMGEVVQA 773 (897)
Q Consensus 738 ~~~~~~e~~~~L~~Li~~CL~~dP~~RP-----Tm~EVl~~ 773 (897)
...+......+.+++.+||+.||++|| +++|+++.
T Consensus 216 -~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 216 -VELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred -cCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 112222345678999999999999999 58888664
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=326.56 Aligned_cols=246 Identities=26% Similarity=0.437 Sum_probs=203.6
Q ss_pred eEEeecCceEEEEEEec-CCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccCCccc
Q 002647 505 RIIGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLE 583 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~gGSL~ 583 (897)
-+||+|.||+||.|+.. +...+|||-+........+-+.+|+.+-++|+|.|||+++|.|.+++.+-+.||-++||+|.
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 37999999999999965 45679999998766666678999999999999999999999999999888999999999999
Q ss_pred cccccCCCCCCCC--CHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEc-cCCceEEeccCcchhcccCCCccc
Q 002647 584 SHLHGDDKVNGPL--DWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLE-HDFTPKVSDFGLARTALDEGNKHI 660 (897)
Q Consensus 584 ~~L~~~~~~~~~L--s~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd-~~~~vKLsDFGLAr~~~~~~~~~~ 660 (897)
++|+. .=++| .+.++-.+..||++||.|||++. |||||||-+||||+ -.|.+||+|||-++.+. +-...
T Consensus 661 sLLrs---kWGPlKDNEstm~fYtkQILeGLkYLHen~---IVHRDIKGDNVLvNTySGvlKISDFGTsKRLA--ginP~ 732 (1226)
T KOG4279|consen 661 SLLRS---KWGPLKDNESTMNFYTKQILEGLKYLHENK---IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLA--GINPC 732 (1226)
T ss_pred HHHHh---ccCCCccchhHHHHHHHHHHHHhhhhhhcc---eeeccccCCcEEEeeccceEEecccccchhhc--cCCcc
Confidence 99964 23567 77888899999999999999988 99999999999996 57899999999998763 33445
Q ss_pred ccccccccccCChhhhhcC--CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhc
Q 002647 661 STHVMGTFGYLAPEYAMTG--HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIE 738 (897)
Q Consensus 661 ~t~~~GT~~Y~APE~l~~~--~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~ 738 (897)
+.++.||..|||||++..+ .|..++|||||||.+.||.||++||-......-. -+.-.++ +..
T Consensus 733 TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAA---MFkVGmy------------KvH 797 (1226)
T KOG4279|consen 733 TETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAA---MFKVGMY------------KVH 797 (1226)
T ss_pred ccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHh---hhhhcce------------ecC
Confidence 5678899999999999865 5788999999999999999999999644322111 0000111 122
Q ss_pred cCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 739 SNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 739 ~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
..++.+...+...+|.+|+.+||.+||++.++++.
T Consensus 798 P~iPeelsaeak~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 798 PPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred CCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence 34566777888999999999999999999998753
|
|
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=302.51 Aligned_cols=266 Identities=25% Similarity=0.305 Sum_probs=197.3
Q ss_pred HhhCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc--ccchHHHHHHHHHHhhccCCceeeEeeeeecCC----
Q 002647 496 KATNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN--QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDN---- 568 (897)
Q Consensus 496 ~at~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~---- 568 (897)
...++|++.++||+|+||.||+|..+ +|+.||||+++... ......+.+|++++++++|+||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 35678999999999999999999975 58899999997543 233356788999999999999999999987654
Q ss_pred ------ceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceE
Q 002647 569 ------NRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPK 642 (897)
Q Consensus 569 ------~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vK 642 (897)
..++|+||+++ +|.+++... ...+++..++.++.|++.||+|||+.+ |+|+||||+||++++++.+|
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~k 156 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG---LVHFSEDHIKSFMKQLLEGLNYCHKKN---FLHRDIKCSNILLNNKGQIK 156 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCcEE
Confidence 78999999986 676766432 346899999999999999999999887 99999999999999999999
Q ss_pred EeccCcchhcccCCCcccccccccccccCChhhhhc-CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhh
Q 002647 643 VSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMT-GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARP 721 (897)
Q Consensus 643 LsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~-~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~ 721 (897)
|+|||++........ .......++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... ..+......
T Consensus 157 l~dfg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~--~~~~~~~~~ 233 (302)
T cd07864 157 LADFGLARLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQEL--AQLELISRL 233 (302)
T ss_pred eCcccccccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHH
Confidence 999999986543221 12223456788999998765 35688999999999999999999999743321 111111000
Q ss_pred cccc-ccccccc--------cc------chhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 722 LLTT-KEGLKTI--------ID------PVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 722 l~~~-~e~l~~i--------iD------p~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
.... ......+ .+ ....... ......+.+++.+||+.+|.+||++.+|+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 234 CGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEF-SFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred hCCCChhhcccccccccccccccccccccchhhhc-CCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0000 0000000 00 0000000 012356889999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=305.79 Aligned_cols=267 Identities=27% Similarity=0.316 Sum_probs=195.9
Q ss_pred hCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccc--cchHHHHHHHHHHhhccCCceeeEeeeeecC--CceEE
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQ--HGGREFLAELEMLSRLHHRNLVKLFGVCIED--NNRCL 572 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~--~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~--~~~~L 572 (897)
.++|++.++||+|+||.||+|... +|+.||+|.++.... .....+.+|++++++++|+||+++++++.+. +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 467999999999999999999965 689999999874332 2234567899999999999999999998765 46799
Q ss_pred EEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhc
Q 002647 573 VYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTA 652 (897)
Q Consensus 573 V~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~ 652 (897)
||||+.+ +|.+++... ...+++.+++.++.|+++||+|||+.+ |+||||||+|||+++++.+||+|||++...
T Consensus 86 v~e~~~~-~l~~~l~~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~kL~dfg~~~~~ 158 (309)
T cd07845 86 VMEYCEQ-DLASLLDNM---PTPFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTY 158 (309)
T ss_pred EEecCCC-CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccceeeec
Confidence 9999975 788887532 356999999999999999999999988 999999999999999999999999999865
Q ss_pred ccCCCcccccccccccccCChhhhhc-CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchh-hHHhhh-------hcc
Q 002647 653 LDEGNKHISTHVMGTFGYLAPEYAMT-GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQEN-LVAWAR-------PLL 723 (897)
Q Consensus 653 ~~~~~~~~~t~~~GT~~Y~APE~l~~-~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~-lv~w~~-------~l~ 723 (897)
..... ..+...++..|+|||++.+ ..++.++||||||+++|||++|+.||.......... ...+.. ...
T Consensus 159 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
T cd07845 159 GLPAK--PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGF 236 (309)
T ss_pred CCccC--CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhh
Confidence 33221 1223345788999998865 457899999999999999999999997543221111 111100 000
Q ss_pred ccccccccc-ccchhccCC---CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 724 TTKEGLKTI-IDPVIESNI---SYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 724 ~~~e~l~~i-iDp~l~~~~---~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
......... +........ .......+.+++.+|++.||++||++.|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 237 SDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred hcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 000000000 000000000 00123456789999999999999999999763
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=303.02 Aligned_cols=267 Identities=24% Similarity=0.296 Sum_probs=194.9
Q ss_pred hCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccc--cchHHHHHHHHHHhhccCCceeeEeeeeecCC------
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQ--HGGREFLAELEMLSRLHHRNLVKLFGVCIEDN------ 568 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~--~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~------ 568 (897)
.++|++.++||+|+||.||+|+.. +++.||||++..... .....+.+|++++++++|+||+++++++.+..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 478999999999999999999965 689999999864332 22346789999999999999999999876543
Q ss_pred --ceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEecc
Q 002647 569 --NRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDF 646 (897)
Q Consensus 569 --~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDF 646 (897)
..++|+||+.+ +|.+.+.. ....+++.++..++.|+++||+|||+.+ |+|+||||+|||+++++.+||+||
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~---~~~~~~~~~~~~i~~~l~~al~~lH~~~---i~H~dl~p~nil~~~~~~~~l~df 159 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLEN---PSVKLTESQIKCYMLQLLEGINYLHENH---ILHRDIKAANILIDNQGILKIADF 159 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECcC
Confidence 35999999975 67666643 2346999999999999999999999988 999999999999999999999999
Q ss_pred CcchhcccCCCc---------ccccccccccccCChhhhhcC-CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhH
Q 002647 647 GLARTALDEGNK---------HISTHVMGTFGYLAPEYAMTG-HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLV 716 (897)
Q Consensus 647 GLAr~~~~~~~~---------~~~t~~~GT~~Y~APE~l~~~-~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv 716 (897)
|+++........ ...+...++..|+|||++.+. .++.++||||||+++|||++|+.||...........+
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~ 239 (311)
T cd07866 160 GLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLI 239 (311)
T ss_pred ccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 999764332211 112334678899999987654 5789999999999999999999999654322111111
Q ss_pred -Hhhhhcc----ccccccccc--------ccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 717 -AWARPLL----TTKEGLKTI--------IDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 717 -~w~~~l~----~~~e~l~~i--------iDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
....... .....+... ..+.+...+ ......+.+++.+|++.||++||++.|++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 240 FKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERF-GKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HHHhCCCChhhchhhhhcccccccccCCCCCccHHHHc-ccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 0000000 000000000 001111100 112256789999999999999999999875
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=311.35 Aligned_cols=249 Identities=25% Similarity=0.382 Sum_probs=208.3
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeecc
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIH 578 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~ 578 (897)
-|.++++||+|.||.||||.++ .|..||||.+-.. .+.+++.+|+.+|++++.+++|+++|.+.....+++|||||-
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG 111 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG 111 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence 3667889999999999999965 6999999998654 345889999999999999999999999999999999999999
Q ss_pred CCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCc
Q 002647 579 NGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNK 658 (897)
Q Consensus 579 gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~ 658 (897)
.|++.+.++. .+++|++.++..++...++||+|||... -||||||+.||||+.+|.+||+|||.|-.+.+ ..
T Consensus 112 AGSiSDI~R~---R~K~L~E~EIs~iL~~TLKGL~YLH~~~---KIHRDIKAGNILLNT~G~AKLADFGVAGQLTD--TM 183 (502)
T KOG0574|consen 112 AGSISDIMRA---RRKPLSEQEISAVLRDTLKGLQYLHDLK---KIHRDIKAGNILLNTDGIAKLADFGVAGQLTD--TM 183 (502)
T ss_pred CCcHHHHHHH---hcCCccHHHHHHHHHHHHhHHHHHHHHH---HHHhhcccccEEEcccchhhhhhccccchhhh--hH
Confidence 9999999964 4578999999999999999999999886 89999999999999999999999999976532 22
Q ss_pred ccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhc
Q 002647 659 HISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIE 738 (897)
Q Consensus 659 ~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~ 738 (897)
.....+.||+.|||||+++.-.|+.++||||||+...||..|++||..--+. +.++.. .. .+...
T Consensus 184 AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPM---------RAIFMI----PT--~PPPT 248 (502)
T KOG0574|consen 184 AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPM---------RAIFMI----PT--KPPPT 248 (502)
T ss_pred HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccc---------ceeEec----cC--CCCCC
Confidence 2344688999999999999999999999999999999999999999642221 111110 00 11111
Q ss_pred cCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 739 SNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 739 ~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
-.-+.....++.++++.||-.+|++|-|+.++++.
T Consensus 249 F~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 249 FKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred CCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 12356677889999999999999999999988764
|
|
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=299.98 Aligned_cols=262 Identities=24% Similarity=0.336 Sum_probs=195.7
Q ss_pred ceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccc-cchHHHHHHHHHHhhcc-CCceeeEeeeeecCCceEEEEeec
Q 002647 501 FHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQ-HGGREFLAELEMLSRLH-HRNLVKLFGVCIEDNNRCLVYELI 577 (897)
Q Consensus 501 y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~-~~~~~f~~Ev~iL~~L~-HpNIV~Llg~~~~~~~~~LV~Ey~ 577 (897)
|++.+.||+|+||+||+|+.. +++.||||++..... .......+|+..+++++ |+|++++++++..++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 567889999999999999975 578899999875432 22234567999999999 999999999999999999999999
Q ss_pred cCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCC
Q 002647 578 HNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN 657 (897)
Q Consensus 578 ~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~ 657 (897)
+|+|.+++.... ...+++.+++.++.|++++|.|||+.+ |+|+||+|+||++++++.++|+|||++.......
T Consensus 81 -~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~- 153 (283)
T cd07830 81 -EGNLYQLMKDRK--GKPFSESVIRSIIYQILQGLAHIHKHG---FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP- 153 (283)
T ss_pred -CCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCCEEEeecccceeccCCC-
Confidence 889999886432 246899999999999999999999987 9999999999999999999999999987543221
Q ss_pred cccccccccccccCChhhhhc-CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchh-hHH---------hhhhcccc-
Q 002647 658 KHISTHVMGTFGYLAPEYAMT-GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQEN-LVA---------WARPLLTT- 725 (897)
Q Consensus 658 ~~~~t~~~GT~~Y~APE~l~~-~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~-lv~---------w~~~l~~~- 725 (897)
......++..|+|||++.. ..++.++||||||+++|||++|+.||......+... ... |.......
T Consensus 154 --~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd07830 154 --PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLAS 231 (283)
T ss_pred --CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhc
Confidence 1233567889999998754 457899999999999999999999986543211110 000 10000000
Q ss_pred --cccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 726 --KEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 726 --~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
...+.......+. .........+.+++.+||+.+|++||++.|++.
T Consensus 232 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 232 KLGFRFPQFAPTSLH-QLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred cccccccccccccHH-HHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 0000000000010 011112456889999999999999999999875
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=326.51 Aligned_cols=249 Identities=24% Similarity=0.406 Sum_probs=204.6
Q ss_pred ceeeeEEeecCceEEEEEEecC-CCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccC
Q 002647 501 FHTSRIIGEGGFGVVYRGILDD-GREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHN 579 (897)
Q Consensus 501 y~~~~~LG~G~fGtVyka~l~~-g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~g 579 (897)
|.++..||.|+||.||+|+.++ +-..|-|+|........++|+-|++||..++||+||+|++.|..++.++++.|||.|
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~G 113 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGG 113 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCC
Confidence 4556779999999999999764 445678888877777788999999999999999999999999999999999999999
Q ss_pred CccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcc
Q 002647 580 GSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH 659 (897)
Q Consensus 580 GSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~ 659 (897)
|-++..+-. -...|++.++.-+++|++.||.|||+.. |||||||+.|||++-+|.++|+|||.+..... ...
T Consensus 114 GAVDaimlE---L~r~LtE~QIqvvc~q~ldALn~LHs~~---iIHRDLKAGNiL~TldGdirLADFGVSAKn~~--t~q 185 (1187)
T KOG0579|consen 114 GAVDAIMLE---LGRVLTEDQIQVVCYQVLDALNWLHSQN---IIHRDLKAGNILLTLDGDIRLADFGVSAKNKS--TRQ 185 (1187)
T ss_pred chHhHHHHH---hccccchHHHHHHHHHHHHHHHHHhhcc---hhhhhccccceEEEecCcEeeecccccccchh--HHh
Confidence 999888743 3457999999999999999999999887 99999999999999999999999999864322 223
Q ss_pred cccccccccccCChhhhh-----cCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccc-cccccccc
Q 002647 660 ISTHVMGTFGYLAPEYAM-----TGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTT-KEGLKTII 733 (897)
Q Consensus 660 ~~t~~~GT~~Y~APE~l~-----~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~-~e~l~~ii 733 (897)
....+.||++|||||+.+ ..+|+.++||||||+.|.||..+.+|....++ ++.++.. +..-..++
T Consensus 186 kRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp---------MRVllKiaKSePPTLl 256 (1187)
T KOG0579|consen 186 KRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP---------MRVLLKIAKSEPPTLL 256 (1187)
T ss_pred hhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch---------HHHHHHHhhcCCCccc
Confidence 345689999999999875 56899999999999999999999999753222 1112211 11111222
Q ss_pred cchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 734 DPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 734 Dp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
. +..+...+.+++.+||..||..||++.++++.
T Consensus 257 q-------PS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 257 Q-------PSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred C-------cchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 1 44566789999999999999999999999863
|
|
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=309.57 Aligned_cols=268 Identities=24% Similarity=0.349 Sum_probs=198.7
Q ss_pred hCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc--ccchHHHHHHHHHHhhccCCceeeEeeeeec----CCce
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN--QHGGREFLAELEMLSRLHHRNLVKLFGVCIE----DNNR 570 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~----~~~~ 570 (897)
.++|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|+.+|++++|+||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 478999999999999999999964 68999999987532 2334678889999999999999999998763 3467
Q ss_pred EEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcch
Q 002647 571 CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR 650 (897)
Q Consensus 571 ~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr 650 (897)
++||||+. |+|.+++.. ...+++..+..++.||++||+|||+.+ |+||||||+|||+++++.+||+|||+++
T Consensus 84 ~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~~~ 155 (334)
T cd07855 84 YVVMDLME-SDLHHIIHS----DQPLTEEHIRYFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMAR 155 (334)
T ss_pred EEEEehhh-hhHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEecccccce
Confidence 99999995 689888853 345999999999999999999999887 9999999999999999999999999987
Q ss_pred hcccCCCc--ccccccccccccCChhhhhc-CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhh-----c
Q 002647 651 TALDEGNK--HISTHVMGTFGYLAPEYAMT-GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARP-----L 722 (897)
Q Consensus 651 ~~~~~~~~--~~~t~~~GT~~Y~APE~l~~-~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~-----l 722 (897)
........ .......|+..|+|||++.. ..++.++||||||+++|||++|+.||...+.......+.-... .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~ 235 (334)
T cd07855 156 GLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEV 235 (334)
T ss_pred eecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHh
Confidence 65332221 11234578899999998765 4578999999999999999999999975432211110000000 0
Q ss_pred c--cccccccccccch-hccCC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 723 L--TTKEGLKTIIDPV-IESNI-----SYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 723 ~--~~~e~l~~iiDp~-l~~~~-----~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
. ...+.+...++.. ..... .......+.+++.+||+.+|++||++.|++..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 236 LNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred hhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0 0000011111000 00001 11234678899999999999999999998774
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-33 Score=299.01 Aligned_cols=241 Identities=24% Similarity=0.338 Sum_probs=189.4
Q ss_pred EeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccCCcc
Q 002647 507 IGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSL 582 (897)
Q Consensus 507 LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~gGSL 582 (897)
||+|+||+||++... +|+.||+|.+.... ......+.+|+++|++++|+||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999854 68999999986432 22345678899999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCccccc
Q 002647 583 ESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIST 662 (897)
Q Consensus 583 ~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~~~t 662 (897)
.+++.... ...+++.+++.++.|++.||.|||+.+ |+||||+|+|||+++++.+||+|||++...... ....
T Consensus 81 ~~~l~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~---~~~~ 152 (277)
T cd05577 81 KYHIYNVG--EPGFPEARAIFYAAQIICGLEHLHQRR---IVYRDLKPENVLLDDHGNVRISDLGLAVELKGG---KKIK 152 (277)
T ss_pred HHHHHHcC--cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEccCcchhhhccC---Cccc
Confidence 99986432 236899999999999999999999988 999999999999999999999999998764321 1122
Q ss_pred ccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhccCCC
Q 002647 663 HVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESNIS 742 (897)
Q Consensus 663 ~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~ 742 (897)
...++..|+|||++.+..++.++||||||+++|+|++|+.||............ ....... ....+
T Consensus 153 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~--~~~~~~~------------~~~~~ 218 (277)
T cd05577 153 GRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEEL--KRRTLEM------------AVEYP 218 (277)
T ss_pred cccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHH--Hhccccc------------cccCC
Confidence 345788999999998888999999999999999999999999654321111100 0000000 00112
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHH
Q 002647 743 YDTLVKVAAIASMCVQPEVSHRPFMGE 769 (897)
Q Consensus 743 ~e~~~~L~~Li~~CL~~dP~~RPTm~E 769 (897)
......+.+++.+||+.||.+||+.+|
T Consensus 219 ~~~~~~~~~li~~~l~~~p~~R~~~~~ 245 (277)
T cd05577 219 DKFSPEAKDLCEALLQKDPEKRLGCRG 245 (277)
T ss_pred ccCCHHHHHHHHHHccCChhHccCCCc
Confidence 223456789999999999999995444
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=299.56 Aligned_cols=261 Identities=25% Similarity=0.311 Sum_probs=198.6
Q ss_pred ceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccc--cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeec
Q 002647 501 FHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQ--HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELI 577 (897)
Q Consensus 501 y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~--~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~ 577 (897)
|...+.||+|++|.||+|... +|+.+++|.++.... .....+.+|+++|++++|+||+++++++..++..++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 456789999999999999964 688999999875432 24467889999999999999999999999999999999999
Q ss_pred cCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCC
Q 002647 578 HNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN 657 (897)
Q Consensus 578 ~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~ 657 (897)
++ +|.+++... ...+++.+++.++.|+++||.|||+.+ |+|+||||+||++++++.+||+|||.+.......
T Consensus 81 ~~-~l~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~- 152 (283)
T cd05118 81 DT-DLYKLIKDR---QRGLPESLIKSYLYQLLQGLAFCHSHG---ILHRDLKPENLLINTEGVLKLADFGLARSFGSPV- 152 (283)
T ss_pred CC-CHHHHHHhh---cccCCHHHHHHHHHHHHHHHHHHHHCC---eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-
Confidence 75 888887532 357999999999999999999999988 9999999999999999999999999987654332
Q ss_pred cccccccccccccCChhhhhcC-CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccc-ccccccccc-
Q 002647 658 KHISTHVMGTFGYLAPEYAMTG-HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTT-KEGLKTIID- 734 (897)
Q Consensus 658 ~~~~t~~~GT~~Y~APE~l~~~-~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~-~e~l~~iiD- 734 (897)
.......++..|+|||.+.+. .++.++||||||+++|+|+||+.||...+..+..... ...+... .+....+.+
T Consensus 153 -~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 229 (283)
T cd05118 153 -RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKI--FRTLGTPDPEVWPKFTSL 229 (283)
T ss_pred -ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--HHHcCCCchHhcccchhh
Confidence 122335678899999998876 7889999999999999999999999654321111000 0000000 000000000
Q ss_pred ----------ch--hccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 735 ----------PV--IESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 735 ----------p~--l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
.. .......+....+.+++..||+.||.+||++.|++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 230 ARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 00 000111233567889999999999999999999975
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=311.56 Aligned_cols=268 Identities=24% Similarity=0.326 Sum_probs=197.6
Q ss_pred hhCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecc--cccchHHHHHHHHHHhhc-cCCceeeEeeeeecC--Cce
Q 002647 497 ATNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRA--NQHGGREFLAELEMLSRL-HHRNLVKLFGVCIED--NNR 570 (897)
Q Consensus 497 at~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~--~~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~--~~~ 570 (897)
..++|++.+.||+|+||.||+|... +|+.+|||++... .......+.+|+.+++++ +|+||++++++|... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 4567888899999999999999965 5889999988542 223345678899999999 999999999998654 357
Q ss_pred EEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcch
Q 002647 571 CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR 650 (897)
Q Consensus 571 ~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr 650 (897)
++||||+. ++|.+++.. ..+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 85 ~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~~---i~H~dl~p~nill~~~~~~kl~d~g~~~ 155 (337)
T cd07852 85 YLVFEYME-TDLHAVIRA-----NILEDVHKRYIMYQLLKALKYIHSGN---VIHRDLKPSNILLNSDCRVKLADFGLAR 155 (337)
T ss_pred EEEecccc-cCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccchh
Confidence 99999997 599888842 26889999999999999999999887 9999999999999999999999999998
Q ss_pred hcccCCCc---ccccccccccccCChhhhhc-CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccc-
Q 002647 651 TALDEGNK---HISTHVMGTFGYLAPEYAMT-GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTT- 725 (897)
Q Consensus 651 ~~~~~~~~---~~~t~~~GT~~Y~APE~l~~-~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~- 725 (897)
........ .......|+..|+|||++.. ..++.++||||||+++|||+||+.||.............+.......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07852 156 SLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAE 235 (337)
T ss_pred ccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 65433221 22334568999999998765 45788999999999999999999999644322111100000000000
Q ss_pred ------cccccccccchhc------cCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 726 ------KEGLKTIIDPVIE------SNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 726 ------~e~l~~iiDp~l~------~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
......+++.... ..........+.+++.+||+.||++||++.++++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 236 DIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0000001100000 00001134568899999999999999999999874
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=310.93 Aligned_cols=268 Identities=25% Similarity=0.351 Sum_probs=199.3
Q ss_pred hCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecc--cccchHHHHHHHHHHhhccCCceeeEeeeeecC-----Cc
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRA--NQHGGREFLAELEMLSRLHHRNLVKLFGVCIED-----NN 569 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~--~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~-----~~ 569 (897)
.++|.+.+.||+|+||+||+|... +++.||||.++.. .......+.+|+.+++.++|+||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 467999999999999999999954 6899999998753 223345678899999999999999999988654 34
Q ss_pred eEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcc
Q 002647 570 RCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLA 649 (897)
Q Consensus 570 ~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLA 649 (897)
.++||||+. ++|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++
T Consensus 84 ~~lv~e~~~-~~L~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 155 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRS----SQTLSDDHCQYFLYQLLRGLKYIHSAN---VLHRDLKPSNLLLNANCDLKICDFGLA 155 (337)
T ss_pred EEEEEeCCC-CCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcCccc
Confidence 799999996 688888842 356999999999999999999999887 999999999999999999999999999
Q ss_pred hhcccCCCcccccccccccccCChhhhhc-CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchh-hHHhhhh------
Q 002647 650 RTALDEGNKHISTHVMGTFGYLAPEYAMT-GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQEN-LVAWARP------ 721 (897)
Q Consensus 650 r~~~~~~~~~~~t~~~GT~~Y~APE~l~~-~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~-lv~w~~~------ 721 (897)
+...... .......++..|+|||.+.. ..++.++|||||||++|||++|+.||...+...... .......
T Consensus 156 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 233 (337)
T cd07858 156 RTTSEKG--DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDL 233 (337)
T ss_pred cccCCCc--ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHh
Confidence 8653321 22234567889999998765 468899999999999999999999996543211000 0000000
Q ss_pred -ccccccccccc-------ccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHHH
Q 002647 722 -LLTTKEGLKTI-------IDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA--LKLV 777 (897)
Q Consensus 722 -l~~~~e~l~~i-------iDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~--L~~l 777 (897)
.... ...... .+..... ...+....+.+++.+||+.+|++||++.|+++. ++.+
T Consensus 234 ~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 234 GFIRN-EKARRYIRSLPYTPRQSFAR-LFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred hhcCc-hhhhHHHHhcCcccccCHHH-HcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence 0000 000000 0000000 011234567899999999999999999999876 5443
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=299.99 Aligned_cols=249 Identities=27% Similarity=0.386 Sum_probs=200.7
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecc---cccchHHHHHHHHHHhhcc-CCceeeEeeeeecCCceEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRA---NQHGGREFLAELEMLSRLH-HRNLVKLFGVCIEDNNRCLV 573 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~---~~~~~~~f~~Ev~iL~~L~-HpNIV~Llg~~~~~~~~~LV 573 (897)
++|.+.+.||+|+||.||+|+.. +|+.||+|++... .....+.+.+|++++++++ |+||+++++++..++..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 47889999999999999999965 7899999998652 2233467889999999998 99999999999999999999
Q ss_pred EeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcc
Q 002647 574 YELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTAL 653 (897)
Q Consensus 574 ~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~ 653 (897)
|||+++++|.+++.. ...+++.+++.|+.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~ql~~~l~~Lh~~~---~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~ 153 (280)
T cd05581 81 LEYAPNGELLQYIRK----YGSLDEKCTRFYAAEILLALEYLHSKG---IIHRDLKPENILLDKDMHIKITDFGTAKVLD 153 (280)
T ss_pred EcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEecCCccccccC
Confidence 999999999999953 346999999999999999999999988 9999999999999999999999999987653
Q ss_pred cCCCc------------------ccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhh
Q 002647 654 DEGNK------------------HISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENL 715 (897)
Q Consensus 654 ~~~~~------------------~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~l 715 (897)
..... .......++..|+|||++....++.++||||||+++++|++|+.||..... ...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~---~~~ 230 (280)
T cd05581 154 PNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE---YLT 230 (280)
T ss_pred CccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH---HHH
Confidence 32210 122234678899999999888899999999999999999999999974331 111
Q ss_pred HHhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCH----HHHHH
Q 002647 716 VAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFM----GEVVQ 772 (897)
Q Consensus 716 v~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm----~EVl~ 772 (897)
... ... ....++......+.+++.+||+.+|.+||++ .|+++
T Consensus 231 ~~~---~~~------------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 231 FQK---ILK------------LEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred HHH---HHh------------cCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 110 000 0011122224567899999999999999999 66653
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-33 Score=299.34 Aligned_cols=255 Identities=25% Similarity=0.327 Sum_probs=198.6
Q ss_pred CceeeeEEeecCceEEEEEEe----cCCCEEEEEEeeccc----ccchHHHHHHHHHHhhc-cCCceeeEeeeeecCCce
Q 002647 500 GFHTSRIIGEGGFGVVYRGIL----DDGREVAVKVLKRAN----QHGGREFLAELEMLSRL-HHRNLVKLFGVCIEDNNR 570 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l----~~g~~VAVK~lk~~~----~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~~~~ 570 (897)
+|++.+.||+|+||.||++.. .+++.||||.++... ....+.+.+|++++.++ +|+||+++++.+..+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 477889999999999999984 357889999987532 22345688999999999 599999999999988899
Q ss_pred EEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcch
Q 002647 571 CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR 650 (897)
Q Consensus 571 ~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr 650 (897)
++||||+.+|+|.+++.. ...+++..+..++.|+++||+|||+.+ ++||||||+||+++.++.++|+|||+++
T Consensus 81 ~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~ql~~~l~~lH~~~---~~H~dl~p~nil~~~~~~~~l~dfg~~~ 153 (288)
T cd05583 81 HLILDYVNGGELFTHLYQ----REHFTESEVRVYIAEIVLALDHLHQLG---IIYRDIKLENILLDSEGHVVLTDFGLSK 153 (288)
T ss_pred EEEEecCCCCcHHHHHhh----cCCcCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEEECcccc
Confidence 999999999999999853 346899999999999999999999887 9999999999999999999999999987
Q ss_pred hcccCCCcccccccccccccCChhhhhcCC--CCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccccc
Q 002647 651 TALDEGNKHISTHVMGTFGYLAPEYAMTGH--LLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEG 728 (897)
Q Consensus 651 ~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~--~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~ 728 (897)
....... .......|+..|+|||.+.+.. .+.++||||||+++|||++|..||....... ......+......
T Consensus 154 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~~~~~~~~~~~~-- 228 (288)
T cd05583 154 EFLAEEE-ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN--SQSEISRRILKSK-- 228 (288)
T ss_pred ccccccc-cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccc--hHHHHHHHHHccC--
Confidence 6543221 1122346889999999987655 6889999999999999999999986322111 1111111111100
Q ss_pred ccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002647 729 LKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKL 776 (897)
Q Consensus 729 l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~ 776 (897)
. ..+......+.+++.+||+.||++|||+.+|.+.|+.
T Consensus 229 ------~----~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 229 ------P----PFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred ------C----CCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 0 0111223457789999999999999999988776653
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=304.65 Aligned_cols=252 Identities=23% Similarity=0.323 Sum_probs=201.3
Q ss_pred hCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeec--ccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEE
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKR--ANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~--~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~ 574 (897)
+++|++.+.||+|.|+.||++... +|+.+|+|++.. ....+.+++.+|+.+.+.|+|||||+|.+.+.++...|||+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 456778889999999999999854 789999998853 34456788999999999999999999999999999999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEcc---CCceEEeccCcchh
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEH---DFTPKVSDFGLART 651 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~---~~~vKLsDFGLAr~ 651 (897)
|+|+||+|..-|-. ....++..+-.+++||+++|+|+|.++ |||||+||+|+||-. .--+||+|||+|..
T Consensus 90 e~m~G~dl~~eIV~----R~~ySEa~aSH~~rQiLeal~yCH~n~---IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~ 162 (355)
T KOG0033|consen 90 DLVTGGELFEDIVA----REFYSEADASHCIQQILEALAYCHSNG---IVHRDLKPENLLLASKAKGAAVKLADFGLAIE 162 (355)
T ss_pred ecccchHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeeeeccCCCceeecccceEEE
Confidence 99999999866632 245778888899999999999999998 999999999999953 34699999999987
Q ss_pred cccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccc
Q 002647 652 ALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKT 731 (897)
Q Consensus 652 ~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~ 731 (897)
.. .........||++|||||++...+|+..+|||+.|||||-|+.|..||.+.+. ..+.. .+....-
T Consensus 163 l~---~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~---~rlye---~I~~g~y---- 229 (355)
T KOG0033|consen 163 VN---DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ---HRLYE---QIKAGAY---- 229 (355)
T ss_pred eC---CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccH---HHHHH---HHhcccc----
Confidence 64 22334467899999999999999999999999999999999999999975322 12211 1111100
Q ss_pred cccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 732 IIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 732 iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
-+++..-. ...++..+|+++||..||.+|.|+.|.++.
T Consensus 230 d~~~~~w~----~is~~Ak~LvrrML~~dP~kRIta~EAL~H 267 (355)
T KOG0033|consen 230 DYPSPEWD----TVTPEAKSLIRRMLTVNPKKRITADEALKH 267 (355)
T ss_pred CCCCcccC----cCCHHHHHHHHHHhccChhhhccHHHHhCC
Confidence 01111111 223456789999999999999999998764
|
|
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=303.75 Aligned_cols=252 Identities=29% Similarity=0.462 Sum_probs=193.3
Q ss_pred hCCceeeeEEeecCceEEEEEEecC-CCEEEEEEeecccc-cchHHHHHHHHHHhhcc-CCceeeEeeeeecCCceEEEE
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILDD-GREVAVKVLKRANQ-HGGREFLAELEMLSRLH-HRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~~-g~~VAVK~lk~~~~-~~~~~f~~Ev~iL~~L~-HpNIV~Llg~~~~~~~~~LV~ 574 (897)
.++|++.+.||+|+||.||+|..++ ++.||||+++.... ....++.+|++++.++. |+||++++++|.++...++||
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 3567889999999999999999764 89999999975432 23456777888777775 999999999999999999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhcc-CCCcEEecCCCCCcEEEccCCceEEeccCcchhcc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHED-SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTAL 653 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~-gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~ 653 (897)
||+.+ +|.+++.. ....+++..+..++.|+++||+|||+. + |+||||+|+||++++++.+||+|||++....
T Consensus 94 e~~~~-~l~~l~~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~~~---i~H~dl~p~nill~~~~~~kL~dfg~~~~~~ 166 (296)
T cd06618 94 ELMST-CLDKLLKR---IQGPIPEDILGKMTVAIVKALHYLKEKHG---VIHRDVKPSNILLDASGNVKLCDFGISGRLV 166 (296)
T ss_pred eccCc-CHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhhCC---EecCCCcHHHEEEcCCCCEEECccccchhcc
Confidence 99854 66666642 234799999999999999999999974 5 9999999999999999999999999987653
Q ss_pred cCCCcccccccccccccCChhhhhcCC----CCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccc
Q 002647 654 DEGNKHISTHVMGTFGYLAPEYAMTGH----LLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGL 729 (897)
Q Consensus 654 ~~~~~~~~t~~~GT~~Y~APE~l~~~~----~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l 729 (897)
.... .....++..|+|||++.... ++.++||||||+++|||++|+.||...... ...+..+ ... ..
T Consensus 167 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~~~~~~~----~~~--~~ 236 (296)
T cd06618 167 DSKA---KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE-FEVLTKI----LQE--EP 236 (296)
T ss_pred CCCc---ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH-HHHHHHH----hcC--CC
Confidence 2221 22345788999999987553 788999999999999999999999642211 1111111 100 00
Q ss_pred cccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 730 KTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 730 ~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
..+ . .......++.+++.+||+.||++||++.++++.
T Consensus 237 ~~~-----~--~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 237 PSL-----P--PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred CCC-----C--CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 000 0 011234568899999999999999999999765
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=296.74 Aligned_cols=250 Identities=24% Similarity=0.362 Sum_probs=195.6
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeecc-----cccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEE
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRA-----NQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLV 573 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~-----~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV 573 (897)
+|.+.++||+|+||.||++... .+..+++|.++.. ......++.+|+.++++++|+||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 4778899999999999999865 3455666666532 122334677899999999999999999999998899999
Q ss_pred EeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcc
Q 002647 574 YELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTAL 653 (897)
Q Consensus 574 ~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~ 653 (897)
|||+++++|.+++.........+++.+++.++.|+++||.|||+.+ ++|+||||+||++++ +.+||+|||+++...
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR---ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC---ccccCCChhheEeec-CCEeecccCceeecC
Confidence 9999999999988654344567999999999999999999999987 999999999999975 569999999987653
Q ss_pred cCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccc
Q 002647 654 DEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTII 733 (897)
Q Consensus 654 ~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~ii 733 (897)
... .......|+..|+|||.+....++.++||||||+++|+|++|..||..... ......... ..
T Consensus 157 ~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~------~~~~~~~~~--~~----- 221 (260)
T cd08222 157 GSC--DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF------LSVVLRIVE--GP----- 221 (260)
T ss_pred CCc--ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH------HHHHHHHHc--CC-----
Confidence 322 222345678899999999888889999999999999999999999863221 111111100 00
Q ss_pred cchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 734 DPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 734 Dp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
.+ ..+......+.+++.+||+.+|++||++.|+++
T Consensus 222 ~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 222 TP----SLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred CC----CCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 00 112233456788999999999999999999975
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-33 Score=300.41 Aligned_cols=259 Identities=17% Similarity=0.231 Sum_probs=183.1
Q ss_pred hCCceeeeEEeecCceEEEEEEecC----CCEEEEEEeecccccch-----------HHHHHHHHHHhhccCCceeeEee
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILDD----GREVAVKVLKRANQHGG-----------REFLAELEMLSRLHHRNLVKLFG 562 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~~----g~~VAVK~lk~~~~~~~-----------~~f~~Ev~iL~~L~HpNIV~Llg 562 (897)
.++|.+.++||+|+||+||+|...+ +..+|+|+......... .....+...+..++|+|++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 4679999999999999999999654 34566665432221110 11223444566678999999999
Q ss_pred eeecCC----ceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccC
Q 002647 563 VCIEDN----NRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHD 638 (897)
Q Consensus 563 ~~~~~~----~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~ 638 (897)
++.... ..++++|++.. ++.+.+.. ....++..+..|+.|+++||+|||+.+ |+||||||+|||++.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiHrDiKp~Nill~~~ 162 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLVE-NTKEIFKR----IKCKNKKLIKNIMKDMLTTLEYIHEHG---ISHGDIKPENIMVDGN 162 (294)
T ss_pred eeeEecCCceEEEEEEehhcc-CHHHHHHh----hccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCC
Confidence 766543 23667777643 55555532 223578889999999999999999887 9999999999999999
Q ss_pred CceEEeccCcchhcccCCCc-----ccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCch
Q 002647 639 FTPKVSDFGLARTALDEGNK-----HISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQE 713 (897)
Q Consensus 639 ~~vKLsDFGLAr~~~~~~~~-----~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~ 713 (897)
+.+||+|||+++........ .......||+.|+|||++.+..++.++|||||||+||||++|+.||.......
T Consensus 163 ~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~-- 240 (294)
T PHA02882 163 NRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNG-- 240 (294)
T ss_pred CcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccch--
Confidence 99999999999865432211 11123469999999999999999999999999999999999999997553221
Q ss_pred hhHHhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002647 714 NLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL 774 (897)
Q Consensus 714 ~lv~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L 774 (897)
+++.-.. .+.+..+....+. .......+.+++..|++.+|++||++.++++.|
T Consensus 241 ~~~~~~~-----~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 241 NLIHAAK-----CDFIKRLHEGKIK---IKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHHHHhH-----HHHHHHhhhhhhc---cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 1111000 0001111111111 112235688999999999999999999998765
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=334.80 Aligned_cols=261 Identities=26% Similarity=0.442 Sum_probs=208.2
Q ss_pred CCceeeeEEeecCceEEEEEEec----C----CCEEEEEEeeccc-ccchHHHHHHHHHHhhc-cCCceeeEeeeeecCC
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD----D----GREVAVKVLKRAN-QHGGREFLAELEMLSRL-HHRNLVKLFGVCIEDN 568 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~----~----g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~~ 568 (897)
++..+.+.||+|.||.|++|... . ...||||.++... ..+.+.+..|+++|+.+ +|+||+.++|+|..++
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~ 375 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDG 375 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCC
Confidence 33445569999999999999843 1 3569999998643 34567899999999998 6999999999999999
Q ss_pred ceEEEEeeccCCccccccccCC---CC-------C--CCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEc
Q 002647 569 NRCLVYELIHNGSLESHLHGDD---KV-------N--GPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLE 636 (897)
Q Consensus 569 ~~~LV~Ey~~gGSL~~~L~~~~---~~-------~--~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd 636 (897)
..++|+||+..|+|.++|+..+ .. . ..|+..+.+.++.|||.||+||++.. +|||||.++||||.
T Consensus 376 ~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~---~vHRDLAaRNVLi~ 452 (609)
T KOG0200|consen 376 PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP---CVHRDLAARNVLIT 452 (609)
T ss_pred ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC---ccchhhhhhhEEec
Confidence 9999999999999999998654 00 1 23899999999999999999999887 99999999999999
Q ss_pred cCCceEEeccCcchhcccCCCcccccccc--cccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCch
Q 002647 637 HDFTPKVSDFGLARTALDEGNKHISTHVM--GTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQE 713 (897)
Q Consensus 637 ~~~~vKLsDFGLAr~~~~~~~~~~~t~~~--GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~ 713 (897)
++..+||+|||+|+.......... .... -...|||||.+....|+.|+|||||||+||||+| |..||.... ...
T Consensus 453 ~~~~~kIaDFGlar~~~~~~~y~~-~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~--~~~ 529 (609)
T KOG0200|consen 453 KNKVIKIADFGLARDHYNKDYYRT-KSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP--PTE 529 (609)
T ss_pred CCCEEEEccccceeccCCCCceEe-cCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC--cHH
Confidence 999999999999996544433321 1122 3457999999999999999999999999999999 888986411 122
Q ss_pred hhHHhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHh
Q 002647 714 NLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCN 779 (897)
Q Consensus 714 ~lv~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~~ 779 (897)
++..+.+. + .+...+..+..++.+|++.||+.+|++||++.|+++.|+....
T Consensus 530 ~l~~~l~~----G----------~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~ 581 (609)
T KOG0200|consen 530 ELLEFLKE----G----------NRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ 581 (609)
T ss_pred HHHHHHhc----C----------CCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence 33322211 1 1122344556778899999999999999999999999988544
|
|
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-33 Score=302.32 Aligned_cols=262 Identities=21% Similarity=0.251 Sum_probs=192.4
Q ss_pred eeEEeecCceEEEEEEecCCCEEEEEEeecc--cccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccCCc
Q 002647 504 SRIIGEGGFGVVYRGILDDGREVAVKVLKRA--NQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGS 581 (897)
Q Consensus 504 ~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~--~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~gGS 581 (897)
.+.+|.|+++.||++.. +++.||||+++.. .....+.+.+|++++++++|+||+++++++.+.+..+++|||+++|+
T Consensus 7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (314)
T cd08216 7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS 85 (314)
T ss_pred hHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence 34455566666666655 5899999998754 33445689999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCc---
Q 002647 582 LESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNK--- 658 (897)
Q Consensus 582 L~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~--- 658 (897)
|.+++.... ...+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||.+.........
T Consensus 86 l~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~LH~~~---ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~ 160 (314)
T cd08216 86 CEDLLKTHF--PEGLPELAIAFILKDVLNALDYIHSKG---FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRV 160 (314)
T ss_pred HHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCcceEEEecCCceEEecCccceeeccccccccc
Confidence 999996432 345889999999999999999999988 999999999999999999999999988754322211
Q ss_pred --ccccccccccccCChhhhhcC--CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhh----hccc------
Q 002647 659 --HISTHVMGTFGYLAPEYAMTG--HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWAR----PLLT------ 724 (897)
Q Consensus 659 --~~~t~~~GT~~Y~APE~l~~~--~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~----~l~~------ 724 (897)
.......++..|+|||++... .++.++|||||||++|||++|+.||...... ..+..-.. ..+.
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 238 (314)
T cd08216 161 VHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPAT--QMLLEKVRGTVPCLLDKSTYPL 238 (314)
T ss_pred cccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhccCccccccCchhh
Confidence 112334577889999998763 5788999999999999999999999753321 11111000 0000
Q ss_pred ccccccc----cccchh----ccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 725 TKEGLKT----IIDPVI----ESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 725 ~~e~l~~----iiDp~l----~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
....... ..++.. ...........+.+++.+||+.||++||++.|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 239 YEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred hcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 0000000 011110 111122334568889999999999999999999874
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-33 Score=295.28 Aligned_cols=243 Identities=25% Similarity=0.333 Sum_probs=187.2
Q ss_pred eEEeecCceEEEEEEec-CCCEEEEEEeecccc---cchHHHHHHHHHH-hhccCCceeeEeeeeecCCceEEEEeeccC
Q 002647 505 RIIGEGGFGVVYRGILD-DGREVAVKVLKRANQ---HGGREFLAELEML-SRLHHRNLVKLFGVCIEDNNRCLVYELIHN 579 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~---~~~~~f~~Ev~iL-~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~g 579 (897)
+.||+|+||.||+|... +|+.||||.+..... .....+..|..++ ..++|+|++++++++..++..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 56999999999999964 689999999865332 1223345555544 455899999999999999999999999999
Q ss_pred CccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcc
Q 002647 580 GSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH 659 (897)
Q Consensus 580 GSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~ 659 (897)
++|.+++.. ...+++..+..++.|++.||.|||+.+ |+||||+|+|||+++++.+||+|||+++....
T Consensus 82 ~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----- 149 (260)
T cd05611 82 GDCASLIKT----LGGLPEDWAKQYIAEVVLGVEDLHQRG---IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----- 149 (260)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEeecccceeccc-----
Confidence 999999853 346899999999999999999999887 99999999999999999999999999875422
Q ss_pred cccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhcc
Q 002647 660 ISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIES 739 (897)
Q Consensus 660 ~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~ 739 (897)
.....++..|+|||.+.+..++.++||||||+++|||++|..||...... .... ..... .. + ...
T Consensus 150 -~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~---~~~~~--~~----~--~~~ 214 (260)
T cd05611 150 -NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD---AVFD---NILSR--RI----N--WPE 214 (260)
T ss_pred -cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH---HHHH---HHHhc--cc----C--CCC
Confidence 22346788999999998888899999999999999999999999643321 1110 00000 00 0 000
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002647 740 NISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL 774 (897)
Q Consensus 740 ~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L 774 (897)
.........+.+++.+||+.+|++||++.++.+.|
T Consensus 215 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 215 EVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred cccccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 01112335678999999999999999876654444
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-33 Score=308.17 Aligned_cols=264 Identities=24% Similarity=0.325 Sum_probs=194.2
Q ss_pred hCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc--ccchHHHHHHHHHHhhccCCceeeEeeeeecCC------
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN--QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDN------ 568 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~------ 568 (897)
.++|...+.||+|+||.||+|+.. +|+.||||+++... ......+.+|++++++++|+||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 478999999999999999999964 68999999987532 223356889999999999999999999987542
Q ss_pred ceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCc
Q 002647 569 NRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGL 648 (897)
Q Consensus 569 ~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGL 648 (897)
..++|+||+.. +|.+++ ...+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 94 ~~~lv~e~~~~-~l~~~~------~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dlkp~NIll~~~~~~kL~dfg~ 163 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIM------GHPLSEDKVQYLVYQMLCGLKYIHSAG---IIHRDLKPGNLAVNEDCELKILDFGL 163 (342)
T ss_pred eEEEEeccccc-CHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCCC
Confidence 46899999964 666654 235899999999999999999999987 99999999999999999999999999
Q ss_pred chhcccCCCcccccccccccccCChhhhhc-CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcc----
Q 002647 649 ARTALDEGNKHISTHVMGTFGYLAPEYAMT-GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLL---- 723 (897)
Q Consensus 649 Ar~~~~~~~~~~~t~~~GT~~Y~APE~l~~-~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~---- 723 (897)
++.... ......++..|+|||++.+ ..++.++|||||||++|||++|+.||...........+.+.....
T Consensus 164 ~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 238 (342)
T cd07879 164 ARHADA-----EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEF 238 (342)
T ss_pred CcCCCC-----CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence 875421 1123467889999999876 467899999999999999999999997543211111000000000
Q ss_pred ----cc---cc---cccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHHH
Q 002647 724 ----TT---KE---GLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA--LKLV 777 (897)
Q Consensus 724 ----~~---~e---~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~--L~~l 777 (897)
.. .. .........+... .......+.+++.+||+.||++||++.|++.. ++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~ 303 (342)
T cd07879 239 VQKLEDKAAKSYIKSLPKYPRKDFSTL-FPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSF 303 (342)
T ss_pred HHHhcccchHHHHhhcCCcccchHHHH-hcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhc
Confidence 00 00 0000000000000 00123457899999999999999999999854 5544
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=313.36 Aligned_cols=250 Identities=23% Similarity=0.340 Sum_probs=210.4
Q ss_pred hhCCceeeeEEeecCceEEEEEEe-cCCCEEEEEEeeccc--ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEE
Q 002647 497 ATNGFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRAN--QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLV 573 (897)
Q Consensus 497 at~~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV 573 (897)
+.+-|.+.+.||+|.|..|-+|++ -+|..||||++.+.. ......+.+|+..|+-++|||||+|+++......+|||
T Consensus 16 IAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLi 95 (864)
T KOG4717|consen 16 IAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLI 95 (864)
T ss_pred eeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEE
Confidence 345577788999999999999994 479999999997644 33446789999999999999999999999998999999
Q ss_pred EeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEc-cCCceEEeccCcchhc
Q 002647 574 YELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLE-HDFTPKVSDFGLARTA 652 (897)
Q Consensus 574 ~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd-~~~~vKLsDFGLAr~~ 652 (897)
+|.=++|+|+|||-+ ....|.++...+++.||+.|+.|+|+.. +|||||||+||.+- .-|-|||.|||++..+
T Consensus 96 LELGD~GDl~DyImK---He~Gl~E~La~kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf 169 (864)
T KOG4717|consen 96 LELGDGGDLFDYIMK---HEEGLNEDLAKKYFAQIVHAISYCHQLH---VVHRDLKPENVVFFEKLGLVKLTDFGFSNKF 169 (864)
T ss_pred EEecCCchHHHHHHh---hhccccHHHHHHHHHHHHHHHHHHhhhh---hhcccCCcceeEEeeecCceEeeeccccccC
Confidence 999999999999963 4456999999999999999999999887 99999999999875 5688999999999876
Q ss_pred ccCCCcccccccccccccCChhhhhcCCCC-ccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccc
Q 002647 653 LDEGNKHISTHVMGTFGYLAPEYAMTGHLL-VKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKT 731 (897)
Q Consensus 653 ~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t-~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~ 731 (897)
.+... .+..+|...|-|||++.+..|+ ++.||||||||||.|++|+.||+..+. .+.+..
T Consensus 170 ~PG~k---L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAND----------------SETLTm 230 (864)
T KOG4717|consen 170 QPGKK---LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAND----------------SETLTM 230 (864)
T ss_pred CCcch---hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccc----------------hhhhhh
Confidence 54332 3567899999999999999885 689999999999999999999975443 233444
Q ss_pred cccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 732 IIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 732 iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
|+|-.. ..+.....+..+||..||..||++|-+..||+..
T Consensus 231 ImDCKY--tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 231 IMDCKY--TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred hhcccc--cCchhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence 444322 2455666778999999999999999999999753
|
|
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-33 Score=297.79 Aligned_cols=251 Identities=24% Similarity=0.333 Sum_probs=195.1
Q ss_pred CceeeeEEeecCceEEEEEEe----cCCCEEEEEEeeccc----ccchHHHHHHHHHHhhc-cCCceeeEeeeeecCCce
Q 002647 500 GFHTSRIIGEGGFGVVYRGIL----DDGREVAVKVLKRAN----QHGGREFLAELEMLSRL-HHRNLVKLFGVCIEDNNR 570 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l----~~g~~VAVK~lk~~~----~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~~~~ 570 (897)
+|++.+.||+|+||.||++.. .+|..||+|+++... ....+.+.+|+++|+++ +|+||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 478889999999999999985 368899999987532 22335688899999999 599999999999998889
Q ss_pred EEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcch
Q 002647 571 CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR 650 (897)
Q Consensus 571 ~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr 650 (897)
++||||+++++|.+++.. ...+++..+..++.|+++||.|||+.+ ++||||||+|||+++++.+||+|||+++
T Consensus 81 ~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~ 153 (290)
T cd05613 81 HLILDYINGGELFTHLSQ----RERFKEQEVQIYSGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSK 153 (290)
T ss_pred EEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEECCCCCEEEeeCccce
Confidence 999999999999999853 346889999999999999999999887 9999999999999999999999999987
Q ss_pred hcccCCCcccccccccccccCChhhhhcC--CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccccc
Q 002647 651 TALDEGNKHISTHVMGTFGYLAPEYAMTG--HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEG 728 (897)
Q Consensus 651 ~~~~~~~~~~~t~~~GT~~Y~APE~l~~~--~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~ 728 (897)
...... ........|+..|+|||++... .++.++||||||+++|||++|+.||+...... ....+........
T Consensus 154 ~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~--~~~~~~~~~~~~~-- 228 (290)
T cd05613 154 EFHEDE-VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKN--SQAEISRRILKSE-- 228 (290)
T ss_pred eccccc-ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccc--cHHHHHHHhhccC--
Confidence 643221 1122245688999999998753 46789999999999999999999996432211 1111111111100
Q ss_pred ccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 002647 729 LKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRP-----FMGEVVQ 772 (897)
Q Consensus 729 l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RP-----Tm~EVl~ 772 (897)
..++......+.+++.+||+.||++|| ++.+++.
T Consensus 229 ----------~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 229 ----------PPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred ----------CCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 011222335678899999999999997 5666544
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=308.22 Aligned_cols=253 Identities=26% Similarity=0.297 Sum_probs=203.1
Q ss_pred CCceeeeEEeecCceEEEEEEecC-CCEEEEEEeeccccc---chHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILDD-GREVAVKVLKRANQH---GGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~~-g~~VAVK~lk~~~~~---~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~ 574 (897)
+.|++.+.||+|.-|+||++.+++ +..+|+|++.+..-. .......|-+||+.++||.+..|++.++.++..||||
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 345567899999999999999774 588999999764433 2345667999999999999999999999999999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
|||+||+|..+++. +....+++..+..++..|+-||+|||..| ||.|||||+||||-++|++.|+||.|+.....
T Consensus 157 eyCpGGdL~~Lrqk--Qp~~~fse~~aRFYaAEvl~ALEYLHmlG---ivYRDLKPENILvredGHIMLsDFDLS~~~~~ 231 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQK--QPGKRFSESAARFYAAEVLLALEYLHMLG---IVYRDLKPENILVREDGHIMLSDFDLSLRCPV 231 (459)
T ss_pred ecCCCccHHHHHhh--CCCCccchhhHHHHHHHHHHHHHHHHhhc---eeeccCCcceeEEecCCcEEeeeccccccCCC
Confidence 99999999999874 44677999999999999999999999998 99999999999999999999999998853210
Q ss_pred C--------------------------------CCc----------------------ccccccccccccCChhhhhcCC
Q 002647 655 E--------------------------------GNK----------------------HISTHVMGTFGYLAPEYAMTGH 680 (897)
Q Consensus 655 ~--------------------------------~~~----------------------~~~t~~~GT~~Y~APE~l~~~~ 680 (897)
. ... ..+..++||-.|+|||++.+..
T Consensus 232 ~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~G 311 (459)
T KOG0610|consen 232 SPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEG 311 (459)
T ss_pred CCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCC
Confidence 0 000 1112357999999999999999
Q ss_pred CCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCC
Q 002647 681 LLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPE 760 (897)
Q Consensus 681 ~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~d 760 (897)
.+.+.|.|.|||+||||+.|+.||.+.+..+ .+..++-..+.-....+......+||++.|.+|
T Consensus 312 HgsAVDWWtfGIflYEmLyG~TPFKG~~~~~----------------Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKd 375 (459)
T KOG0610|consen 312 HGSAVDWWTFGIFLYEMLYGTTPFKGSNNKE----------------TLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKD 375 (459)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCcCCCCchh----------------hHHHHhcCCCcCCCCCcchhHHHHHHHHHhccC
Confidence 9999999999999999999999997654322 222222222221112244567889999999999
Q ss_pred CCCCCC----HHHHHH
Q 002647 761 VSHRPF----MGEVVQ 772 (897)
Q Consensus 761 P~~RPT----m~EVl~ 772 (897)
|.+|-- +.||-+
T Consensus 376 P~kRlg~~rGA~eIK~ 391 (459)
T KOG0610|consen 376 PSKRLGSKRGAAEIKR 391 (459)
T ss_pred hhhhhccccchHHhhc
Confidence 999987 666644
|
|
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-34 Score=318.65 Aligned_cols=253 Identities=23% Similarity=0.333 Sum_probs=203.9
Q ss_pred hCCceeeeEEeecCceEEEEEEecCCCEEEEEEeec--ccccchHHHHHHHHHHhhcc-CCceeeEeeeeecCCceEEEE
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKR--ANQHGGREFLAELEMLSRLH-HRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~--~~~~~~~~f~~Ev~iL~~L~-HpNIV~Llg~~~~~~~~~LV~ 574 (897)
...|++.++||+||.+.||++...+.+.+|+|++.. .+.....-|..|+++|.+|+ |.+||.|++|-..++..|+||
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm 439 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM 439 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence 345888899999999999999998889999998753 44455677999999999994 999999999999999999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
||=+ .+|..+|.... .....| .++.+..|++.++.++|+++ |||.||||.|+|+-. |.+||+|||.|..+..
T Consensus 440 E~Gd-~DL~kiL~k~~--~~~~~~-~lk~ywkqML~aV~~IH~~g---IVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~ 511 (677)
T KOG0596|consen 440 ECGD-IDLNKILKKKK--SIDPDW-FLKFYWKQMLLAVKTIHQHG---IVHSDLKPANFLLVK-GRLKLIDFGIANAIQP 511 (677)
T ss_pred eccc-ccHHHHHHhcc--CCCchH-HHHHHHHHHHHHHHHHHHhc---eeecCCCcccEEEEe-eeEEeeeechhcccCc
Confidence 9864 48999996432 223445 78889999999999999998 999999999999964 5899999999998776
Q ss_pred CCCcccccccccccccCChhhhhcC-----------CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcc
Q 002647 655 EGNKHISTHVMGTFGYLAPEYAMTG-----------HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLL 723 (897)
Q Consensus 655 ~~~~~~~t~~~GT~~Y~APE~l~~~-----------~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~ 723 (897)
+...-.....+||+.||+||.+... +...++||||||||||+|+.|+.||... .+. |
T Consensus 512 DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~-----~n~--~----- 579 (677)
T KOG0596|consen 512 DTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI-----INQ--I----- 579 (677)
T ss_pred cccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH-----HHH--H-----
Confidence 6666666778999999999998643 3567999999999999999999999521 111 1
Q ss_pred cccccccccccchhccCCCHH-HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 724 TTKEGLKTIIDPVIESNISYD-TLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 724 ~~~e~l~~iiDp~l~~~~~~e-~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
..+..+.|+.-.-+++.- ...+++++++.||..||++||++.|+++.
T Consensus 580 ---aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 580 ---AKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred ---HHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 234455565443333321 11228899999999999999999999874
|
|
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=326.52 Aligned_cols=273 Identities=21% Similarity=0.234 Sum_probs=188.9
Q ss_pred HhhCCceeeeEEeecCceEEEEEEecC--CCEEEEEEe---------------ec--ccccchHHHHHHHHHHhhccCCc
Q 002647 496 KATNGFHTSRIIGEGGFGVVYRGILDD--GREVAVKVL---------------KR--ANQHGGREFLAELEMLSRLHHRN 556 (897)
Q Consensus 496 ~at~~y~~~~~LG~G~fGtVyka~l~~--g~~VAVK~l---------------k~--~~~~~~~~f~~Ev~iL~~L~HpN 556 (897)
...++|++.+.||+|+||+||++.++. +..+++|.+ +. ........+.+|+++|++++|+|
T Consensus 145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hpn 224 (501)
T PHA03210 145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHEN 224 (501)
T ss_pred hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCC
Confidence 345789999999999999999987542 222222211 00 11122356889999999999999
Q ss_pred eeeEeeeeecCCceEEEEeeccCCccccccccCCC-CCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEE
Q 002647 557 LVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDK-VNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILL 635 (897)
Q Consensus 557 IV~Llg~~~~~~~~~LV~Ey~~gGSL~~~L~~~~~-~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILL 635 (897)
||++++++...+..++|+|++. ++|.+++..... ........++..|+.||+.||+|||+.+ ||||||||+||||
T Consensus 225 Iv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g---IiHrDLKP~NILl 300 (501)
T PHA03210 225 ILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK---LIHRDIKLENIFL 300 (501)
T ss_pred cCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEE
Confidence 9999999999999999999985 577777643221 1223445677889999999999999987 9999999999999
Q ss_pred ccCCceEEeccCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCC-CCCCCCCCchh
Q 002647 636 EHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP-VDLSQPPGQEN 714 (897)
Q Consensus 636 d~~~~vKLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~P-fd~~~~~~~~~ 714 (897)
+.++.+||+|||+++..... .........||..|+|||++.+..++.++|||||||+||||++|+.+ +..........
T Consensus 301 ~~~~~vkL~DFGla~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~ 379 (501)
T PHA03210 301 NCDGKIVLGDFGTAMPFEKE-REAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQ 379 (501)
T ss_pred CCCCCEEEEeCCCceecCcc-cccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHH
Confidence 99999999999999865332 22222346799999999999999999999999999999999998754 43222221122
Q ss_pred hHHhhhhccccccc-------ccccccch-h---ccCC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 715 LVAWARPLLTTKEG-------LKTIIDPV-I---ESNI-----SYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 715 lv~w~~~l~~~~e~-------l~~iiDp~-l---~~~~-----~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
+......+....+. +...++.. + ...+ .......+.+++.+||+.||++||++.|+++.
T Consensus 380 ~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 380 LLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred HHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 22111111000000 00000000 0 0000 00112346678999999999999999999763
|
|
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=303.06 Aligned_cols=243 Identities=24% Similarity=0.387 Sum_probs=195.2
Q ss_pred eEEeecCceEEEEEEec-CCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccCCccc
Q 002647 505 RIIGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLE 583 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~gGSL~ 583 (897)
.+||+|+||.||++..+ +|+.||||++..........+.+|+.++++++|+|++++++++...+..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 57999999999999964 78999999987555555567899999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcccccc
Q 002647 584 SHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTH 663 (897)
Q Consensus 584 ~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~~~t~ 663 (897)
+++.. ..+++..+..++.|++.||+|||+.+ |+|+||||+||++++++.++|+|||++....... .....
T Consensus 106 ~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH~~g---ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~--~~~~~ 175 (292)
T cd06657 106 DIVTH-----TRMNEEQIAAVCLAVLKALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PRRKS 175 (292)
T ss_pred HHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEcccccceeccccc--ccccc
Confidence 98742 35899999999999999999999987 9999999999999999999999999987543221 11233
Q ss_pred cccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhccCCCH
Q 002647 664 VMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESNISY 743 (897)
Q Consensus 664 ~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~~ 743 (897)
..|+..|+|||++....++.++||||||+++|||++|+.||..... ......... .+. ..+.. ..
T Consensus 176 ~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~---~~~~~~~~~------~~~----~~~~~--~~ 240 (292)
T cd06657 176 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP---LKAMKMIRD------NLP----PKLKN--LH 240 (292)
T ss_pred cccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHh------hCC----cccCC--cc
Confidence 5688999999999888889999999999999999999999864321 111111110 000 00000 01
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 744 DTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 744 e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
.....+.+++.+||+.+|.+||++.||++
T Consensus 241 ~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 241 KVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred cCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 12345678999999999999999999876
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-33 Score=305.13 Aligned_cols=262 Identities=23% Similarity=0.305 Sum_probs=192.5
Q ss_pred eEEeec--CceEEEEEEec-CCCEEEEEEeeccc--ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccC
Q 002647 505 RIIGEG--GFGVVYRGILD-DGREVAVKVLKRAN--QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHN 579 (897)
Q Consensus 505 ~~LG~G--~fGtVyka~l~-~g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~g 579 (897)
..||+| +||+||++... +|+.||||++.... ....+.+.+|+.+++.++|+||++++++|..++..++|+||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 356666 89999999964 78999999987432 22346788999999999999999999999999999999999999
Q ss_pred CccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcc
Q 002647 580 GSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH 659 (897)
Q Consensus 580 GSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~ 659 (897)
|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+|++||+.+..........
T Consensus 84 ~~l~~~l~~~~--~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~ 158 (328)
T cd08226 84 GSANSLLKTYF--PEGMSEALIGNILFGALRGLNYLHQNG---YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKA 158 (328)
T ss_pred CCHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccc
Confidence 99999986432 235899999999999999999999887 9999999999999999999999998654332211110
Q ss_pred -----cccccccccccCChhhhhcC--CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhh---------cc
Q 002647 660 -----ISTHVMGTFGYLAPEYAMTG--HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARP---------LL 723 (897)
Q Consensus 660 -----~~t~~~GT~~Y~APE~l~~~--~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~---------l~ 723 (897)
......++..|+|||++.+. .++.++|||||||++|||++|+.||...... ..+...... ..
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 236 (328)
T cd08226 159 KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRT--QMLLQKLKGPPYSPLDITTF 236 (328)
T ss_pred cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChH--HHHHHHhcCCCCCCcccccc
Confidence 01112345679999998763 4789999999999999999999999654321 111110000 00
Q ss_pred cc------------c----------ccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 724 TT------------K----------EGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 724 ~~------------~----------e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
.. . .....+.+..+...........+.+|+.+||+.||++|||+.|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 237 PCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred chhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 00 0 00001111111111223445678999999999999999999999764
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-34 Score=298.14 Aligned_cols=254 Identities=27% Similarity=0.361 Sum_probs=201.5
Q ss_pred HhhCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccc-----c---chHHHHHHHHHHhhc-cCCceeeEeeeee
Q 002647 496 KATNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQ-----H---GGREFLAELEMLSRL-HHRNLVKLFGVCI 565 (897)
Q Consensus 496 ~at~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~-----~---~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~ 565 (897)
...++|...++||.|..++|-++..+ +|.+.|+|++..... . -.++-.+|+++|+++ .||+|+.+.++++
T Consensus 14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye 93 (411)
T KOG0599|consen 14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE 93 (411)
T ss_pred hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc
Confidence 34567788899999999999999855 688999999864221 1 123466799999998 6999999999999
Q ss_pred cCCceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEec
Q 002647 566 EDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSD 645 (897)
Q Consensus 566 ~~~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsD 645 (897)
.+...++|+|.|+.|.|.|+|.. .-.|+++...+|+.|+.+|++|||..+ ||||||||+|||+|+|.++||+|
T Consensus 94 s~sF~FlVFdl~prGELFDyLts----~VtlSEK~tR~iMrqlfegVeylHa~~---IVHRDLKpENILlddn~~i~isD 166 (411)
T KOG0599|consen 94 SDAFVFLVFDLMPRGELFDYLTS----KVTLSEKETRRIMRQLFEGVEYLHARN---IVHRDLKPENILLDDNMNIKISD 166 (411)
T ss_pred CcchhhhhhhhcccchHHHHhhh----heeecHHHHHHHHHHHHHHHHHHHHhh---hhhcccChhheeeccccceEEec
Confidence 99999999999999999999953 456999999999999999999999988 99999999999999999999999
Q ss_pred cCcchhcccCCCcccccccccccccCChhhhhc------CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhh
Q 002647 646 FGLARTALDEGNKHISTHVMGTFGYLAPEYAMT------GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWA 719 (897)
Q Consensus 646 FGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~------~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~ 719 (897)
||++..+..+. .....+||++|+|||.+.- ..|+...|+|++|||+|-|+.|..||.... .++ ..
T Consensus 167 FGFa~~l~~Ge---kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk-----Qml-ML 237 (411)
T KOG0599|consen 167 FGFACQLEPGE---KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK-----QML-ML 237 (411)
T ss_pred cceeeccCCch---hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHH-----HHH-HH
Confidence 99998764432 2356899999999998863 246778999999999999999999995321 000 00
Q ss_pred hhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 720 RPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 720 ~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
+.+.. +.-++ ....-.+......+||.+||+.||.+|-|.+|++..
T Consensus 238 R~Ime---GkyqF-----~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 238 RMIME---GKYQF-----RSPEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred HHHHh---ccccc-----CCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 11110 00111 111122445567899999999999999999999874
|
|
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-33 Score=305.55 Aligned_cols=266 Identities=26% Similarity=0.354 Sum_probs=200.3
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc--ccchHHHHHHHHHHhhccCCceeeEeeeeecCC-----ceE
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN--QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDN-----NRC 571 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~-----~~~ 571 (897)
+|.+.++||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++|+||+++++++...+ ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5788999999999999999965 58999999987543 334467999999999999999999999998765 789
Q ss_pred EEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchh
Q 002647 572 LVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLART 651 (897)
Q Consensus 572 LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~ 651 (897)
+||||+. ++|.+++.. ...+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.++|+|||++..
T Consensus 81 lv~e~~~-~~l~~~l~~----~~~l~~~~~~~i~~~l~~~l~~LH~~g---i~H~dlkp~nili~~~~~~~L~dfg~~~~ 152 (330)
T cd07834 81 IVTELME-TDLHKVIKS----PQPLTDDHIQYFLYQILRGLKYLHSAN---VIHRDLKPSNILVNSNCDLKICDFGLARG 152 (330)
T ss_pred EEecchh-hhHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccCceEe
Confidence 9999998 488888853 337999999999999999999999988 99999999999999999999999999986
Q ss_pred cccCCC-cccccccccccccCChhhhhcC-CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhh-HHhhhhcc-----
Q 002647 652 ALDEGN-KHISTHVMGTFGYLAPEYAMTG-HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENL-VAWARPLL----- 723 (897)
Q Consensus 652 ~~~~~~-~~~~t~~~GT~~Y~APE~l~~~-~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~l-v~w~~~l~----- 723 (897)
...... ........++..|+|||++.+. .++.++||||||+++|+|++|+.||........... ..+.....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 232 (330)
T cd07834 153 VDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLK 232 (330)
T ss_pred ecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhh
Confidence 543221 0122345678899999999887 789999999999999999999999975442211110 00000000
Q ss_pred -cccccccccccc-hhccC-----CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 724 -TTKEGLKTIIDP-VIESN-----ISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 724 -~~~e~l~~iiDp-~l~~~-----~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
.........+.. ..... ........+.+++.+||+.+|++||++.++++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 289 (330)
T cd07834 233 FITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH 289 (330)
T ss_pred hccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 000000000000 00000 011123567899999999999999999999874
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=293.56 Aligned_cols=249 Identities=20% Similarity=0.272 Sum_probs=191.3
Q ss_pred HHHHHhhCCceeeeEE--eecCceEEEEEEec-CCCEEEEEEeecccccchHHHHHHHHHHhhc-cCCceeeEeeeeecC
Q 002647 492 NDIEKATNGFHTSRII--GEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLAELEMLSRL-HHRNLVKLFGVCIED 567 (897)
Q Consensus 492 ~ei~~at~~y~~~~~L--G~G~fGtVyka~l~-~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~ 567 (897)
.++....++|.+.+.+ |+|+||.||++..+ ++..+|+|.+....... .|+.....+ +|+||+++++.+...
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~~~~ 81 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSVTTL 81 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEEecC
Confidence 3444445677776766 99999999999954 68889999987532211 122222222 799999999999999
Q ss_pred CceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCC-ceEEecc
Q 002647 568 NNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDF-TPKVSDF 646 (897)
Q Consensus 568 ~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~-~vKLsDF 646 (897)
+..++||||+++|+|.+++.. ...+++.++..++.|+++||.|||+.+ |+||||||+||+++.++ .++|+||
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~l~df 154 (267)
T PHA03390 82 KGHVLIMDYIKDGDLFDLLKK----EGKLSEAEVKKIIRQLVEALNDLHKHN---IIHNDIKLENVLYDRAKDRIYLCDY 154 (267)
T ss_pred CeeEEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEeCCCCeEEEecC
Confidence 999999999999999999953 237999999999999999999999988 99999999999999998 9999999
Q ss_pred CcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccc
Q 002647 647 GLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTK 726 (897)
Q Consensus 647 GLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~ 726 (897)
|+++..... ....++..|+|||++.+..++.++||||||+++|||++|+.||...... ..+...|......
T Consensus 155 g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~-- 225 (267)
T PHA03390 155 GLCKIIGTP------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDE-ELDLESLLKRQQK-- 225 (267)
T ss_pred ccceecCCC------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcc-hhhHHHHHHhhcc--
Confidence 998754221 2346889999999999889999999999999999999999999743221 1122222221100
Q ss_pred ccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCC-HHHHHH
Q 002647 727 EGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPF-MGEVVQ 772 (897)
Q Consensus 727 e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPT-m~EVl~ 772 (897)
. . .........+.+++..||+.+|.+||+ +.|+++
T Consensus 226 -~-~---------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 226 -K-L---------PFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred -c-C---------CcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 0 0 011123456788999999999999996 688764
|
|
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=295.05 Aligned_cols=241 Identities=26% Similarity=0.349 Sum_probs=185.6
Q ss_pred EEeecCceEEEEEEec-CCCEEEEEEeecccc---cchHHHHHHHH---HHhhccCCceeeEeeeeecCCceEEEEeecc
Q 002647 506 IIGEGGFGVVYRGILD-DGREVAVKVLKRANQ---HGGREFLAELE---MLSRLHHRNLVKLFGVCIEDNNRCLVYELIH 578 (897)
Q Consensus 506 ~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~---~~~~~f~~Ev~---iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~ 578 (897)
+||+|+||.||+|... +++.||+|.+..... .....+..|.. +++...|+||+.+++++.+++..++||||+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999964 588999999865321 11123444444 3444579999999999999999999999999
Q ss_pred CCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCc
Q 002647 579 NGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNK 658 (897)
Q Consensus 579 gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~ 658 (897)
+|+|.+++.. ...+++.++..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 g~~L~~~l~~----~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~--- 150 (278)
T cd05606 81 GGDLHYHLSQ----HGVFSEAEMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKK--- 150 (278)
T ss_pred CCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCCCCHHHEEECCCCCEEEccCcCccccCcc---
Confidence 9999998842 356999999999999999999999887 999999999999999999999999998754221
Q ss_pred ccccccccccccCChhhhhcC-CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchh
Q 002647 659 HISTHVMGTFGYLAPEYAMTG-HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVI 737 (897)
Q Consensus 659 ~~~t~~~GT~~Y~APE~l~~~-~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l 737 (897)
......|+..|+|||++.++ .++.++||||||+++|||++|+.||........... .. ... ..+..
T Consensus 151 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~-~~--~~~--------~~~~~- 217 (278)
T cd05606 151 -KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI-DR--MTL--------TMAVE- 217 (278)
T ss_pred -CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHH-HH--Hhh--------ccCCC-
Confidence 11234689999999998754 688999999999999999999999975432211111 00 000 00111
Q ss_pred ccCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 002647 738 ESNISYDTLVKVAAIASMCVQPEVSHRP-----FMGEVVQ 772 (897)
Q Consensus 738 ~~~~~~e~~~~L~~Li~~CL~~dP~~RP-----Tm~EVl~ 772 (897)
.+......+.+++.+|+..+|.+|| ++.|+++
T Consensus 218 ---~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 218 ---LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred ---CCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 1112245688899999999999999 8999864
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-34 Score=324.99 Aligned_cols=244 Identities=25% Similarity=0.416 Sum_probs=191.6
Q ss_pred eeEEeecCceEEEEEEec-CCCEEEEEEeec----ccccchHHHHHHHHHHhhccCCceeeEeeeeecCCc--eEEEEee
Q 002647 504 SRIIGEGGFGVVYRGILD-DGREVAVKVLKR----ANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNN--RCLVYEL 576 (897)
Q Consensus 504 ~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~----~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~--~~LV~Ey 576 (897)
..+||+|+|-+||||... +|.+||--.++. ......+.|..|+.+|+.|+|+|||+++.++.+... ..+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 468999999999999965 577787644432 122334789999999999999999999999987665 6789999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEcc-CCceEEeccCcchhcccC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEH-DFTPKVSDFGLARTALDE 655 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~-~~~vKLsDFGLAr~~~~~ 655 (897)
+..|+|..|+.. .+.++.+.+..|++||++||.|||.+ .|+|||||||-+||+|+. .|.|||+|+|||.....
T Consensus 125 ~TSGtLr~Y~kk----~~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~- 198 (632)
T KOG0584|consen 125 FTSGTLREYRKK----HRRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK- 198 (632)
T ss_pred ccCCcHHHHHHH----hccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhc-
Confidence 999999999953 45688999999999999999999998 589999999999999975 58999999999987532
Q ss_pred CCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccc
Q 002647 656 GNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDP 735 (897)
Q Consensus 656 ~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp 735 (897)
.....+.|||.|||||... ..|++..||||||+.++||+|+..||..-. +-.+.-+.... +
T Consensus 199 ---s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~-----n~AQIYKKV~S---G------- 259 (632)
T KOG0584|consen 199 ---SHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECT-----NPAQIYKKVTS---G------- 259 (632)
T ss_pred ---cccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhC-----CHHHHHHHHHc---C-------
Confidence 2234589999999999766 889999999999999999999999996322 22111111111 0
Q ss_pred hhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 736 VIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 736 ~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
.....+..-...++.+||.+|+.. ..+|+++.|+++.
T Consensus 260 iKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 260 IKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred CCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 000111111234678899999999 9999999999763
|
|
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-33 Score=301.87 Aligned_cols=247 Identities=28% Similarity=0.377 Sum_probs=193.6
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEe
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYE 575 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~E 575 (897)
.|...+.||+|+||.||+|+.. ++..+|+|.+.... ....+++.+|+++++.++|+|++++++++......++|||
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 3666788999999999999964 67889999986422 2233568899999999999999999999999999999999
Q ss_pred eccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccC
Q 002647 576 LIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655 (897)
Q Consensus 576 y~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~ 655 (897)
|+. |+|.+++.. ....+++.++..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++.....
T Consensus 96 ~~~-~~l~~~~~~---~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~- 167 (308)
T cd06634 96 YCL-GSASDLLEV---HKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP- 167 (308)
T ss_pred ccC-CCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHhEEECCCCcEEECCcccceeecC-
Confidence 996 588777642 2346899999999999999999999887 99999999999999999999999999875432
Q ss_pred CCcccccccccccccCChhhhh---cCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccccccccc
Q 002647 656 GNKHISTHVMGTFGYLAPEYAM---TGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTI 732 (897)
Q Consensus 656 ~~~~~~t~~~GT~~Y~APE~l~---~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~i 732 (897)
.....++..|+|||++. ...++.++|||||||++|||++|+.||....... ....+.. ...
T Consensus 168 -----~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~~~~~~------~~~--- 231 (308)
T cd06634 168 -----ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--ALYHIAQ------NES--- 231 (308)
T ss_pred -----cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH--HHHHHhh------cCC---
Confidence 12346788999999875 3567889999999999999999999985432110 1111110 000
Q ss_pred ccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 002647 733 IDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775 (897)
Q Consensus 733 iDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~ 775 (897)
+.. ........+.+|+.+||+.+|++||++.+|++...
T Consensus 232 --~~~---~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~ 269 (308)
T cd06634 232 --PAL---QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 269 (308)
T ss_pred --CCc---CcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcc
Confidence 000 01123355788999999999999999999987643
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=293.30 Aligned_cols=262 Identities=29% Similarity=0.365 Sum_probs=197.5
Q ss_pred ceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc--ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeec
Q 002647 501 FHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN--QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELI 577 (897)
Q Consensus 501 y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~ 577 (897)
|+..+.||+|+||.||+|+.. +++.||+|.+.... ....+.+.+|++++++++|+|++++++++.+.+..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 556788999999999999965 58999999997643 333467889999999999999999999999999999999999
Q ss_pred cCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCC
Q 002647 578 HNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN 657 (897)
Q Consensus 578 ~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~ 657 (897)
. ++|.+++... ...+++..++.++.|+++||+|||+.+ |+||||+|+||++++++.+||+|||+++.......
T Consensus 81 ~-~~l~~~i~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 153 (282)
T cd07829 81 D-MDLKKYLDKR---PGPLSPNLIKSIMYQLLRGLAYCHSHR---ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR 153 (282)
T ss_pred C-cCHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChheEEEcCCCCEEEecCCcccccCCCcc
Confidence 8 5899999642 146999999999999999999999988 99999999999999999999999999876533221
Q ss_pred cccccccccccccCChhhhhcC-CCCccccEEechhHHHHHHhCCCCCCCCCCCCch-hhHHhh-------hhccc----
Q 002647 658 KHISTHVMGTFGYLAPEYAMTG-HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQE-NLVAWA-------RPLLT---- 724 (897)
Q Consensus 658 ~~~~t~~~GT~~Y~APE~l~~~-~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~-~lv~w~-------~~l~~---- 724 (897)
......++..|+|||++... .++.++||||||+++|||++|+.||......+.. ...... +....
T Consensus 154 --~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (282)
T cd07829 154 --TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPD 231 (282)
T ss_pred --ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccc
Confidence 22234567789999998776 7889999999999999999999999653321110 000000 00000
Q ss_pred ccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 725 TKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 725 ~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
................. ......+.+++..||+.+|++||++.+|+.
T Consensus 232 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 232 YKPTFPKFPPKDLEKVL-PRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred ccccccccCccchHHhc-ccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 00000000000000000 111456899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=305.46 Aligned_cols=269 Identities=26% Similarity=0.329 Sum_probs=200.0
Q ss_pred ecHHHHHHhhCCceeeeEEeecCceEEEEEEe-cCCCEEEEEEeeccc--ccchHHHHHHHHHHhhccCCceeeEeeeee
Q 002647 489 FTLNDIEKATNGFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRAN--QHGGREFLAELEMLSRLHHRNLVKLFGVCI 565 (897)
Q Consensus 489 f~~~ei~~at~~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~ 565 (897)
....++..+.++|.+.+.||+|+||.||+|.. .+|+.||+|+++... ....+.+.+|++++++++|+||+++++++.
T Consensus 7 ~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~ 86 (345)
T cd07877 7 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT 86 (345)
T ss_pred hHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeee
Confidence 44566777889999999999999999999985 478999999987532 223456889999999999999999999886
Q ss_pred cC------CceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCC
Q 002647 566 ED------NNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDF 639 (897)
Q Consensus 566 ~~------~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~ 639 (897)
.. ...+++++++ +++|.+++.. ..+++..++.++.|+++||+|||+.+ |+||||||+||++++++
T Consensus 87 ~~~~~~~~~~~~lv~~~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~ 157 (345)
T cd07877 87 PARSLEEFNDVYLVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDC 157 (345)
T ss_pred ecccccccccEEEEehhc-ccCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEcCCC
Confidence 43 3467888877 7799887742 35899999999999999999999988 99999999999999999
Q ss_pred ceEEeccCcchhcccCCCcccccccccccccCChhhhhc-CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchh-hHH
Q 002647 640 TPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMT-GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQEN-LVA 717 (897)
Q Consensus 640 ~vKLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~-~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~-lv~ 717 (897)
.+||+|||+++.... ......++..|+|||++.+ ..++.++|||||||++|||++|+.||.......... ...
T Consensus 158 ~~kl~dfg~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~ 232 (345)
T cd07877 158 ELKILDFGLARHTDD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 232 (345)
T ss_pred CEEEecccccccccc-----cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 999999999875422 1233567889999998876 467889999999999999999999996433211110 000
Q ss_pred hhhhccccccccccccc-----------chhccC---CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 718 WARPLLTTKEGLKTIID-----------PVIESN---ISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 718 w~~~l~~~~e~l~~iiD-----------p~l~~~---~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
.... ...+....+.+ ...... ........+.+++.+|++.||.+||++.|++..
T Consensus 233 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 233 LVGT--PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred HhCC--CCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 0000 00000000000 000000 000123457899999999999999999998765
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-33 Score=304.41 Aligned_cols=265 Identities=22% Similarity=0.261 Sum_probs=193.7
Q ss_pred CCce-eeeEEeecCceEEEEEEec-CCCEEEEEEeecccccc--------------hHHHHHHHHHHhhccCCceeeEee
Q 002647 499 NGFH-TSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQHG--------------GREFLAELEMLSRLHHRNLVKLFG 562 (897)
Q Consensus 499 ~~y~-~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~~--------------~~~f~~Ev~iL~~L~HpNIV~Llg 562 (897)
++|. +.+.||+|+||+||+|... +++.||||.++...... ...+.+|++++++++|+||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 3454 3477999999999999965 68999999986532221 125789999999999999999999
Q ss_pred eeecCCceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceE
Q 002647 563 VCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPK 642 (897)
Q Consensus 563 ~~~~~~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vK 642 (897)
++..++..++||||+. |+|.+++.. ...+++.....++.|++.||+|||+.+ |+|+|||++|||++.++.+|
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~~---i~H~dl~~~nill~~~~~~k 159 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDR----KIRLTESQVKCILLQILNGLNVLHKWY---FMHRDLSPANIFINSKGICK 159 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHeEECCCCCEE
Confidence 9999999999999997 689988842 346899999999999999999999887 99999999999999999999
Q ss_pred EeccCcchhcccCC------------CcccccccccccccCChhhhhcC-CCCccccEEechhHHHHHHhCCCCCCCCCC
Q 002647 643 VSDFGLARTALDEG------------NKHISTHVMGTFGYLAPEYAMTG-HLLVKSDVYSYGVVLLELLTGRKPVDLSQP 709 (897)
Q Consensus 643 LsDFGLAr~~~~~~------------~~~~~t~~~GT~~Y~APE~l~~~-~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~ 709 (897)
|+|||+++...... .........++..|+|||++.+. .++.++||||||+++|||++|+.||...+.
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~ 239 (335)
T PTZ00024 160 IADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENE 239 (335)
T ss_pred ECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 99999987543110 01111223467889999998764 468899999999999999999999975432
Q ss_pred CCch-hhHHhhhhccc----cccc------ccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 710 PGQE-NLVAWARPLLT----TKEG------LKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 710 ~~~~-~lv~w~~~l~~----~~e~------l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
.+.. .+......... .... ........... ........+.+++.+||+.+|++||++.|++.
T Consensus 240 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 240 IDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKT-IFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred HHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHH-hCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 2111 01110000000 0000 00000000100 01122356789999999999999999999975
|
|
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=300.84 Aligned_cols=244 Identities=29% Similarity=0.404 Sum_probs=191.8
Q ss_pred ceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccc---cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 501 FHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQ---HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 501 y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~---~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
|...+.||+|+||+||+|+.. +|+.||+|++..... ...+.+.+|++++++++|+|++++++++.+....++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 555678999999999999964 688999999864322 2335688999999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
+. |+|.+++.. ....+++.+++.++.|++.+|.|||+.+ |+|+||||+||+++.++.+||+|||++.....
T Consensus 103 ~~-~~l~~~l~~---~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~-- 173 (313)
T cd06633 103 CL-GSASDLLEV---HKKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASKSSP-- 173 (313)
T ss_pred CC-CCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChhhEEECCCCCEEEeecCCCcccCC--
Confidence 96 577777742 2356899999999999999999999887 99999999999999999999999999864321
Q ss_pred CcccccccccccccCChhhhh---cCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccc
Q 002647 657 NKHISTHVMGTFGYLAPEYAM---TGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTII 733 (897)
Q Consensus 657 ~~~~~t~~~GT~~Y~APE~l~---~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~ii 733 (897)
.....|+..|+|||++. ...++.++|||||||++|||++|+.||...+.. ....+. .. .......
T Consensus 174 ----~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~---~~~~~~---~~--~~~~~~~ 241 (313)
T cd06633 174 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM---SALYHI---AQ--NDSPTLQ 241 (313)
T ss_pred ----CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH---HHHHHH---Hh--cCCCCCC
Confidence 12356889999999974 456788999999999999999999998643221 111110 00 0000000
Q ss_pred cchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 734 DPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 734 Dp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
.......+.+++.+||+.+|.+||++.|+++.
T Consensus 242 --------~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 242 --------SNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred --------ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11122457889999999999999999999864
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=301.50 Aligned_cols=265 Identities=24% Similarity=0.309 Sum_probs=191.7
Q ss_pred CceeeeEEeecCceEEEEEEec-C--CCEEEEEEeeccc--ccchHHHHHHHHHHhhc-cCCceeeEeeeeecC----Cc
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-D--GREVAVKVLKRAN--QHGGREFLAELEMLSRL-HHRNLVKLFGVCIED----NN 569 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~--g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~----~~ 569 (897)
+|.+.+.||+|+||.||++... + +..||+|++.... ....+.+.+|+++++++ +|+||+++++++... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4788899999999999999965 3 7789999987422 22345788999999999 599999999875432 45
Q ss_pred eEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcc
Q 002647 570 RCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLA 649 (897)
Q Consensus 570 ~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLA 649 (897)
.++++||+. ++|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 81 ~~~~~e~~~-~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivH~dlkp~Nili~~~~~~kl~Dfg~a 152 (332)
T cd07857 81 LYLYEELME-ADLHQIIRS----GQPLTDAHFQSFIYQILCGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGLA 152 (332)
T ss_pred EEEEEeccc-CCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHeEEcCCCCEEeCcCCCc
Confidence 688889886 689888843 346899999999999999999999988 999999999999999999999999999
Q ss_pred hhcccCCCc--ccccccccccccCChhhhhc-CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhh-HH--------
Q 002647 650 RTALDEGNK--HISTHVMGTFGYLAPEYAMT-GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENL-VA-------- 717 (897)
Q Consensus 650 r~~~~~~~~--~~~t~~~GT~~Y~APE~l~~-~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~l-v~-------- 717 (897)
+........ .......|+..|+|||++.+ ..++.++|||||||++|+|++|+.||...+....... +.
T Consensus 153 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 232 (332)
T cd07857 153 RGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEE 232 (332)
T ss_pred eecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 865332211 11233568999999998765 4678999999999999999999999975432110000 00
Q ss_pred hhhhcccccc-----cccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 718 WARPLLTTKE-----GLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 718 w~~~l~~~~e-----~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
+...+..... .....-...+. .........+.+++.+|++.||++||++.|+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 233 TLSRIGSPKAQNYIRSLPNIPKKPFE-SIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred HHHhhhhhhHHHHHHhccccCCcchH-hhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000000000 00000000000 0001123568899999999999999999998643
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-33 Score=306.04 Aligned_cols=267 Identities=24% Similarity=0.338 Sum_probs=194.5
Q ss_pred hCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecC---------
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIED--------- 567 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~--------- 567 (897)
..+|.+.+.||.|+||.||+|... +|..||+|.+........+.+.+|++++++++|+||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 367999999999999999999964 6899999999776666667899999999999999999999876543
Q ss_pred -----CceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEc-cCCce
Q 002647 568 -----NNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLE-HDFTP 641 (897)
Q Consensus 568 -----~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd-~~~~v 641 (897)
...++||||+. ++|.+++. ...+++..+..++.||++||+|||+.+ |+||||||+|||++ +++.+
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivH~dikp~Nili~~~~~~~ 154 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLE-----QGPLSEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANVFINTEDLVL 154 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCceE
Confidence 34689999997 58888774 235899999999999999999999988 99999999999997 55678
Q ss_pred EEeccCcchhcccCCC-cccccccccccccCChhhhhc-CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhh
Q 002647 642 KVSDFGLARTALDEGN-KHISTHVMGTFGYLAPEYAMT-GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWA 719 (897)
Q Consensus 642 KLsDFGLAr~~~~~~~-~~~~t~~~GT~~Y~APE~l~~-~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~ 719 (897)
||+|||+++....... ........++..|+|||++.. ..++.++|||||||++|||++|+.||...............
T Consensus 155 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~ 234 (342)
T cd07854 155 KIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILES 234 (342)
T ss_pred EECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 9999999875422111 111123457889999998754 56788999999999999999999999654321111110000
Q ss_pred hhcccc--cccccccccc-----hhccCC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 720 RPLLTT--KEGLKTIIDP-----VIESNI-----SYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 720 ~~l~~~--~e~l~~iiDp-----~l~~~~-----~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
...... .......+.. ...... ......++.+++..||+.||++||++.|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 235 VPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred cCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 000000 0000000000 000000 01123467889999999999999999999753
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-33 Score=315.40 Aligned_cols=250 Identities=23% Similarity=0.333 Sum_probs=205.6
Q ss_pred HhhCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccc--cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEE
Q 002647 496 KATNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQ--HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCL 572 (897)
Q Consensus 496 ~at~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~--~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~L 572 (897)
.....|.+...||+|.|++|.+|+.. ++.+||||.+++... ...+.+.+|+++|+.|+|||||+++.+......+|+
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl 132 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL 132 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence 35678999999999999999999954 689999999986433 233568899999999999999999999999999999
Q ss_pred EEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhc
Q 002647 573 VYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTA 652 (897)
Q Consensus 573 V~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~ 652 (897)
||||+.+|.+++||.+ .+.+.+..+..++.|+.++++|||.++ |||||||++||||+.+.++||+|||++..+
T Consensus 133 V~eya~~ge~~~yl~~----~gr~~e~~ar~~F~q~vsaveYcH~k~---ivHrdLk~eNilL~~~mnikIaDfgfS~~~ 205 (596)
T KOG0586|consen 133 VMEYASGGELFDYLVK----HGRMKEKEARAKFRQIVSAVEYCHSKN---IVHRDLKAENILLDENMNIKIADFGFSTFF 205 (596)
T ss_pred EEEeccCchhHHHHHh----cccchhhhhhhhhHHHHHHHHHHhhcc---eeccccchhhcccccccceeeeccccceee
Confidence 9999999999999964 455667888999999999999999998 999999999999999999999999999876
Q ss_pred ccCCCcccccccccccccCChhhhhcCCC-CccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccc
Q 002647 653 LDEGNKHISTHVMGTFGYLAPEYAMTGHL-LVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKT 731 (897)
Q Consensus 653 ~~~~~~~~~t~~~GT~~Y~APE~l~~~~~-t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~ 731 (897)
. ........+|++.|.|||++++..| .+++|+||+|++||-|+.|..||++....+- ...
T Consensus 206 ~---~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~L----------------r~r 266 (596)
T KOG0586|consen 206 D---YGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKEL----------------RPR 266 (596)
T ss_pred c---ccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccc----------------cch
Confidence 4 2334556899999999999998887 5899999999999999999999985432111 111
Q ss_pred cccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 732 IIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 732 iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
++-.+++ ++.-...+..+++++++-.+|.+|+++.++.+.
T Consensus 267 vl~gk~r--Ip~~ms~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 267 VLRGKYR--IPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred heeeeec--ccceeechhHHHHHHhhccCccccCCHHHhhhh
Confidence 1111111 111122345678999999999999999998764
|
|
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=302.28 Aligned_cols=266 Identities=24% Similarity=0.335 Sum_probs=198.2
Q ss_pred HHHHhhCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecc--cccchHHHHHHHHHHhhccCCceeeEeeeeec-CC
Q 002647 493 DIEKATNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRA--NQHGGREFLAELEMLSRLHHRNLVKLFGVCIE-DN 568 (897)
Q Consensus 493 ei~~at~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~--~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~-~~ 568 (897)
++..++++|++.+.||+|+||.||+|... ++..||||++... .....+.+.+|++++++++|+||+++.++|.. ..
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 83 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE 83 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence 34457889999999999999999999954 7899999988642 22334678899999999999999999999876 45
Q ss_pred ceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCc
Q 002647 569 NRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGL 648 (897)
Q Consensus 569 ~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGL 648 (897)
..++|+||+ +++|.+++.. ..+++.....++.|+++||+|||+.+ |+||||||+|||+++++.+||+|||+
T Consensus 84 ~~~lv~e~~-~~~L~~~~~~-----~~~~~~~~~~~~~ql~~aL~~LH~~~---iiH~dl~p~Nili~~~~~~~l~dfg~ 154 (328)
T cd07856 84 DIYFVTELL-GTDLHRLLTS-----RPLEKQFIQYFLYQILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDFGL 154 (328)
T ss_pred cEEEEeehh-ccCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEeECCCCCEEeCcccc
Confidence 789999998 5688888742 35788889999999999999999988 99999999999999999999999999
Q ss_pred chhcccCCCcccccccccccccCChhhhhc-CCCCccccEEechhHHHHHHhCCCCCCCCCCCCch-hhHHh--------
Q 002647 649 ARTALDEGNKHISTHVMGTFGYLAPEYAMT-GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQE-NLVAW-------- 718 (897)
Q Consensus 649 Ar~~~~~~~~~~~t~~~GT~~Y~APE~l~~-~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~-~lv~w-------- 718 (897)
+..... ......++..|+|||++.+ ..++.++||||||+++|||+||+.||......... .+.++
T Consensus 155 ~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~ 229 (328)
T cd07856 155 ARIQDP-----QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDV 229 (328)
T ss_pred ccccCC-----CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 875321 1123457889999998765 56889999999999999999999999643321100 01111
Q ss_pred hhhcccccccccccccchhccCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 719 ARPLLTTKEGLKTIIDPVIESNIS-----YDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 719 ~~~l~~~~e~l~~iiDp~l~~~~~-----~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
...... ...+..+.+-......+ ......+.+++.+||+.+|++||++.|++..
T Consensus 230 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 230 INTICS-ENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HHhccc-hhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000 00000000000000111 1123578899999999999999999998764
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.8e-32 Score=301.62 Aligned_cols=263 Identities=23% Similarity=0.342 Sum_probs=195.4
Q ss_pred HHhhCCceeeeEEeecCceEEEEEEe-cCCCEEEEEEeeccc--ccchHHHHHHHHHHhhccCCceeeEeeeeecCC---
Q 002647 495 EKATNGFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRAN--QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDN--- 568 (897)
Q Consensus 495 ~~at~~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~--- 568 (897)
....++|.+.+.||+|+||.||+|.. .+|..||||++.... ......+.+|+++|++++|+||+++++++..+.
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07880 11 WEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLD 90 (343)
T ss_pred hccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccc
Confidence 34578899999999999999999985 478999999986432 222356889999999999999999999987543
Q ss_pred ---ceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEec
Q 002647 569 ---NRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSD 645 (897)
Q Consensus 569 ---~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsD 645 (897)
..++||||+ +++|.+++. ...+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|
T Consensus 91 ~~~~~~lv~e~~-~~~l~~~~~-----~~~l~~~~~~~i~~qi~~al~~LH~~g---i~H~dlkp~Nill~~~~~~kl~d 161 (343)
T cd07880 91 RFHDFYLVMPFM-GTDLGKLMK-----HEKLSEDRIQFLVYQMLKGLKYIHAAG---IIHRDLKPGNLAVNEDCELKILD 161 (343)
T ss_pred ccceEEEEEecC-CCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEee
Confidence 358999999 778988874 246899999999999999999999988 99999999999999999999999
Q ss_pred cCcchhcccCCCcccccccccccccCChhhhhc-CCCCccccEEechhHHHHHHhCCCCCCCCCCCCch-hhHH------
Q 002647 646 FGLARTALDEGNKHISTHVMGTFGYLAPEYAMT-GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQE-NLVA------ 717 (897)
Q Consensus 646 FGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~-~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~-~lv~------ 717 (897)
||++...... .....++..|+|||++.+ ..++.++||||||+++|+|++|+.||......... ....
T Consensus 162 fg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 236 (343)
T cd07880 162 FGLARQTDSE-----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPS 236 (343)
T ss_pred cccccccccC-----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 9998754221 123467889999999876 45789999999999999999999999643221000 0000
Q ss_pred --hhhhccccc-----ccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 718 --WARPLLTTK-----EGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 718 --w~~~l~~~~-----e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
|...+.... ..+.......+. .........+.+++.+|++.||++||++.++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 237 KEFVQKLQSEDAKNYVKKLPRFRKKDFR-SLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred HHHHHhhcchhHHHHHHhccccCcchHH-HhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000000000 000000000000 001122345789999999999999999999984
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.5e-32 Score=302.91 Aligned_cols=261 Identities=26% Similarity=0.375 Sum_probs=196.3
Q ss_pred hhCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecc--cccchHHHHHHHHHHhhccCCceeeEeeeeecCCc----
Q 002647 497 ATNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRA--NQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNN---- 569 (897)
Q Consensus 497 at~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~--~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~---- 569 (897)
..++|.+.+.||+|+||.||+|... +++.||||++... .....+.+.+|+.++++++|+|++++++++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 5678999999999999999999975 6789999998643 22234567889999999999999999998876554
Q ss_pred --eEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccC
Q 002647 570 --RCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFG 647 (897)
Q Consensus 570 --~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFG 647 (897)
.++|+||+ +++|.+++.. ..+++.+++.++.|+++||+|||+.+ |+||||||+||++++++.+||+|||
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nill~~~~~~kL~dfg 163 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC-----QKLSDDHIQFLVYQILRGLKYIHSAG---IIHRDLKPSNIAVNEDCELKILDFG 163 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEcccc
Confidence 89999998 6699988852 46999999999999999999999887 9999999999999999999999999
Q ss_pred cchhcccCCCcccccccccccccCChhhhhc-CCCCccccEEechhHHHHHHhCCCCCCCCCCCCch-hhHHhh------
Q 002647 648 LARTALDEGNKHISTHVMGTFGYLAPEYAMT-GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQE-NLVAWA------ 719 (897)
Q Consensus 648 LAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~-~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~-~lv~w~------ 719 (897)
++...... .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||......... .+....
T Consensus 164 ~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~ 238 (343)
T cd07851 164 LARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEE 238 (343)
T ss_pred cccccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHH
Confidence 98764321 233467889999998865 36789999999999999999999999644321110 000000
Q ss_pred --hhcccccccccccccchhc---cC---CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 720 --RPLLTTKEGLKTIIDPVIE---SN---ISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 720 --~~l~~~~e~l~~iiDp~l~---~~---~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
..+. .+....++..... .. ........+.+++.+||+.+|++|||+.||++.
T Consensus 239 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 239 LLQKIS--SESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred HHhhcc--chhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 0000 0000000000000 00 001124578899999999999999999998763
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.6e-32 Score=282.18 Aligned_cols=236 Identities=31% Similarity=0.378 Sum_probs=191.4
Q ss_pred EeecCceEEEEEEec-CCCEEEEEEeecccc---cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccCCcc
Q 002647 507 IGEGGFGVVYRGILD-DGREVAVKVLKRANQ---HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSL 582 (897)
Q Consensus 507 LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~---~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~gGSL 582 (897)
||+|+||.||++... +++.+|+|.+..... .....+..|++++++++|+||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999965 589999999875432 2345788999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCccccc
Q 002647 583 ESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIST 662 (897)
Q Consensus 583 ~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~~~t 662 (897)
.+++.. ...+++.++..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... ....
T Consensus 81 ~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lh~~~---~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~ 151 (250)
T cd05123 81 FSHLSK----EGRFSEERARFYAAEIVLALEYLHSLG---IIYRDLKPENILLDADGHIKLTDFGLAKELSSEG--SRTN 151 (250)
T ss_pred HHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcceEEEcCCCcEEEeecCcceecccCC--Cccc
Confidence 999953 236899999999999999999999987 9999999999999999999999999987653321 1233
Q ss_pred ccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhccCCC
Q 002647 663 HVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESNIS 742 (897)
Q Consensus 663 ~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~ 742 (897)
...++..|++||...+...+.++|+||||+++|||++|+.||...+. ...... ..... ..++
T Consensus 152 ~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~---~~~~~~---~~~~~------------~~~~ 213 (250)
T cd05123 152 TFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR---KEIYEK---ILKDP------------LRFP 213 (250)
T ss_pred CCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH---HHHHHH---HhcCC------------CCCC
Confidence 45688899999999888889999999999999999999999964322 111111 11000 0111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHH
Q 002647 743 YDTLVKVAAIASMCVQPEVSHRPFMGE 769 (897)
Q Consensus 743 ~e~~~~L~~Li~~CL~~dP~~RPTm~E 769 (897)
......+.+++.+||..||++||++.+
T Consensus 214 ~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 214 EFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred CCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 222356788999999999999999954
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.5e-32 Score=314.78 Aligned_cols=203 Identities=33% Similarity=0.480 Sum_probs=173.5
Q ss_pred ceeeeEEeecCceEEEEEEe-cCCCEEEEEEeeccc-ccchHHHHHHHHHHhhccCCceeeEeeeeecCC------ceEE
Q 002647 501 FHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRAN-QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDN------NRCL 572 (897)
Q Consensus 501 y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~------~~~L 572 (897)
+...+.||+|+||.||+|+. ..|+.||||.++... ....+...+|+++|++|+|+|||+++++-.+.. ...+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 34567899999999999994 579999999997633 344567889999999999999999999876543 5589
Q ss_pred EEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEc--cCC--ceEEeccCc
Q 002647 573 VYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLE--HDF--TPKVSDFGL 648 (897)
Q Consensus 573 V~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd--~~~--~vKLsDFGL 648 (897)
|||||.+|||+..|.... ....|++.+.+.++.+++.||.|||+++ ||||||||.||++- ++| --||+|||.
T Consensus 95 vmEyC~gGsL~~~L~~PE-N~~GLpE~e~l~lL~d~~~al~~LrEn~---IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPE-NAYGLPESEFLDLLSDLVSALRHLRENG---IVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred EEeecCCCcHHHHhcCcc-cccCCCHHHHHHHHHHHHHHHHHHHHcC---ceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 999999999999997643 3456999999999999999999999988 99999999999983 334 479999999
Q ss_pred chhcccCCCcccccccccccccCChhhhhc-CCCCccccEEechhHHHHHHhCCCCCCCCCCC
Q 002647 649 ARTALDEGNKHISTHVMGTFGYLAPEYAMT-GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPP 710 (897)
Q Consensus 649 Ar~~~~~~~~~~~t~~~GT~~Y~APE~l~~-~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~ 710 (897)
|+...++ ...+.++||..|++||.+.. +.|+..+|.|||||++||++||..||-.....
T Consensus 171 Arel~d~---s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~p 230 (732)
T KOG4250|consen 171 ARELDDN---SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGP 230 (732)
T ss_pred cccCCCC---CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCc
Confidence 9976433 25677899999999999984 88899999999999999999999999765544
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-32 Score=297.19 Aligned_cols=269 Identities=26% Similarity=0.362 Sum_probs=220.9
Q ss_pred cHHHHHHhhCCceeeeEEeecCceEEEEEEec------CCCEEEEEEeec-ccccchHHHHHHHHHHhhccCCceeeEee
Q 002647 490 TLNDIEKATNGFHTSRIIGEGGFGVVYRGILD------DGREVAVKVLKR-ANQHGGREFLAELEMLSRLHHRNLVKLFG 562 (897)
Q Consensus 490 ~~~ei~~at~~y~~~~~LG~G~fGtVyka~l~------~g~~VAVK~lk~-~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg 562 (897)
...|+.....+++...++-+|.||.||.|.+. +.+.|-||.++. ..+.+...|+.|.-+|..+.|+|++.+.+
T Consensus 275 r~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~ 354 (563)
T KOG1024|consen 275 RLQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLG 354 (563)
T ss_pred hHHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeE
Confidence 35666666778888899999999999999754 345678888875 34445567899999999999999999999
Q ss_pred eeecCC-ceEEEEeeccCCccccccccCC----CCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEcc
Q 002647 563 VCIEDN-NRCLVYELIHNGSLESHLHGDD----KVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEH 637 (897)
Q Consensus 563 ~~~~~~-~~~LV~Ey~~gGSL~~~L~~~~----~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~ 637 (897)
++.++. ..+++|.++.-|+|..+|...+ .....++..+...++.|++.||+|||+++ |||.||.++|++||+
T Consensus 355 V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~---ViHkDiAaRNCvIdd 431 (563)
T KOG1024|consen 355 VSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG---VIHKDIAARNCVIDD 431 (563)
T ss_pred EEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC---cccchhhhhcceehh
Confidence 998764 5688899999999999997332 12235788889999999999999999998 999999999999999
Q ss_pred CCceEEeccCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhH
Q 002647 638 DFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLV 716 (897)
Q Consensus 638 ~~~vKLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv 716 (897)
..++||+|=.|+|...+.+.............||++|.+.+..|+.++|||||||+||||+| |+.|+..-++.+...+
T Consensus 432 ~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~y- 510 (563)
T KOG1024|consen 432 QLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHY- 510 (563)
T ss_pred heeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHH-
Confidence 99999999999998887776666666677889999999999999999999999999999999 9999976554332222
Q ss_pred HhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 002647 717 AWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVC 778 (897)
Q Consensus 717 ~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~ 778 (897)
+..+.++. -+.++..++..++.-||...|++||++.+++.-|....
T Consensus 511 ------lkdGyRla----------QP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~ 556 (563)
T KOG1024|consen 511 ------LKDGYRLA----------QPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFH 556 (563)
T ss_pred ------Hhccceec----------CCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence 11122222 24456778899999999999999999999999887654
|
|
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-33 Score=338.96 Aligned_cols=253 Identities=29% Similarity=0.405 Sum_probs=198.5
Q ss_pred hhCCceeeeEEeecCceEEEEEE-ecCCCEEEEEEeecc--cccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEE
Q 002647 497 ATNGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRA--NQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLV 573 (897)
Q Consensus 497 at~~y~~~~~LG~G~fGtVyka~-l~~g~~VAVK~lk~~--~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV 573 (897)
.+-++....+||.|.||.||-|. .++|+..|||-++.. .......+.+|+.+|..|+|||+|+++|+-.+++..+|.
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHH
Confidence 34567777899999999999999 567899999988642 344456788999999999999999999999999999999
Q ss_pred EeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcc
Q 002647 574 YELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTAL 653 (897)
Q Consensus 574 ~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~ 653 (897)
||||++|+|.+.+.. ..-+++.....+..|++.|++|||++| ||||||||.|||||.+|.+|++|||.|+.+.
T Consensus 1313 MEyC~~GsLa~ll~~----gri~dE~vt~vyt~qll~gla~LH~~g---IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~ 1385 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEH----GRIEDEMVTRVYTKQLLEGLAYLHEHG---IVHRDIKPANILLDFNGLIKYGDFGSAVKIK 1385 (1509)
T ss_pred HHHhccCcHHHHHHh----cchhhhhHHHHHHHHHHHHHHHHHhcC---ceecCCCccceeeecCCcEEeecccceeEec
Confidence 999999999999953 233555666678899999999999998 9999999999999999999999999998765
Q ss_pred cCCC--cccccccccccccCChhhhhcCC---CCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccccc
Q 002647 654 DEGN--KHISTHVMGTFGYLAPEYAMTGH---LLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEG 728 (897)
Q Consensus 654 ~~~~--~~~~t~~~GT~~Y~APE~l~~~~---~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~ 728 (897)
.... .......+||+.|||||++.+.+ ...++||||+|||++||+||++||...+.. |+.-+...-..
T Consensus 1386 ~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne-------~aIMy~V~~gh 1458 (1509)
T KOG4645|consen 1386 NNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE-------WAIMYHVAAGH 1458 (1509)
T ss_pred CchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch-------hHHHhHHhccC
Confidence 4321 11223568999999999998644 356899999999999999999999644332 32211111111
Q ss_pred ccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 729 LKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 729 l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
.|. ++.....+=.+++.+|++.||++|.++.|+++
T Consensus 1459 -----~Pq----~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1459 -----KPQ----IPERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred -----CCC----CchhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 111 22233345578999999999999977776543
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-31 Score=322.00 Aligned_cols=145 Identities=33% Similarity=0.467 Sum_probs=130.5
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccc---cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQ---HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~---~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~ 574 (897)
++|.+.++||+|+||+||+|... +++.||||+++.... .....+.+|+++++.++|+||+++++++......||||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 67999999999999999999965 689999999975432 22357889999999999999999999999999999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcch
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR 650 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr 650 (897)
||+.+++|.+++.. ...+++..++.|+.||+.||+|||..+ ||||||||+||||+.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~----~~~l~~~~~~~i~~qil~aL~yLH~~g---IiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHI----YGYFDEEMAVKYISEVALALDYLHRHG---IIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999999999853 346889999999999999999999887 9999999999999999999999999986
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-32 Score=326.88 Aligned_cols=251 Identities=28% Similarity=0.414 Sum_probs=187.8
Q ss_pred hhCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecc-cccchHHHHHHHHHHhhccCCceeeEeeeeec--------
Q 002647 497 ATNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRA-NQHGGREFLAELEMLSRLHHRNLVKLFGVCIE-------- 566 (897)
Q Consensus 497 at~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~-~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~-------- 566 (897)
-..+|+..++||+||||.|||++.+ ||+.+|||+|... .......+.+|+++|.+|+|||||+++..+.+
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ 556 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVL 556 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccc
Confidence 3466888899999999999999976 8999999998643 33334568899999999999999998732210
Q ss_pred --------------------------------------------------------------------------------
Q 002647 567 -------------------------------------------------------------------------------- 566 (897)
Q Consensus 567 -------------------------------------------------------------------------------- 566 (897)
T Consensus 557 ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~ 636 (1351)
T KOG1035|consen 557 EIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDS 636 (1351)
T ss_pred cccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccccc
Confidence
Q ss_pred -----------------------C--------CceEEEEeeccCCccccccccCCCCCCCC-CHHHHHHHHHHHHHHHhh
Q 002647 567 -----------------------D--------NNRCLVYELIHNGSLESHLHGDDKVNGPL-DWDARMKIALGAARGLAY 614 (897)
Q Consensus 567 -----------------------~--------~~~~LV~Ey~~gGSL~~~L~~~~~~~~~L-s~~~rl~Ia~qIa~gL~Y 614 (897)
+ ..+||=||||+.-.|+++++... .. .-...++++.+|++||.|
T Consensus 637 e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~----~~~~~d~~wrLFreIlEGLaY 712 (1351)
T KOG1035|consen 637 EGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNH----FNSQRDEAWRLFREILEGLAY 712 (1351)
T ss_pred CCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcc----cchhhHHHHHHHHHHHHHHHH
Confidence 0 01367789999888888875321 12 456789999999999999
Q ss_pred hhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcc----------------cCCCcccccccccccccCChhhhhc
Q 002647 615 LHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTAL----------------DEGNKHISTHVMGTFGYLAPEYAMT 678 (897)
Q Consensus 615 LH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~----------------~~~~~~~~t~~~GT~~Y~APE~l~~ 678 (897)
+|+.+ ||||||||.||+||+++.|||+|||+|.... ........|..+||.-|+|||++.+
T Consensus 713 IH~~g---iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~ 789 (1351)
T KOG1035|consen 713 IHDQG---IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSD 789 (1351)
T ss_pred HHhCc---eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcc
Confidence 99998 9999999999999999999999999998621 0011224466789999999999876
Q ss_pred C---CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhc--cCCCHHHHHHHHHHH
Q 002647 679 G---HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIE--SNISYDTLVKVAAIA 753 (897)
Q Consensus 679 ~---~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~--~~~~~e~~~~L~~Li 753 (897)
. +|+.|+|+||+||||+||+. ||... .+......-. + +..+. .++....+..-..+|
T Consensus 790 ~~~~~Yn~KiDmYSLGIVlFEM~y---PF~Ts--MERa~iL~~L----------R---~g~iP~~~~f~~~~~~~e~slI 851 (1351)
T KOG1035|consen 790 TSSNKYNSKIDMYSLGIVLFEMLY---PFGTS--MERASILTNL----------R---KGSIPEPADFFDPEHPEEASLI 851 (1351)
T ss_pred cccccccchhhhHHHHHHHHHHhc---cCCch--HHHHHHHHhc----------c---cCCCCCCcccccccchHHHHHH
Confidence 5 49999999999999999995 45421 0111111111 1 11111 223334445557899
Q ss_pred HHccCCCCCCCCCHHHHHH
Q 002647 754 SMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 754 ~~CL~~dP~~RPTm~EVl~ 772 (897)
+++++.||.+|||+.|+++
T Consensus 852 ~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 852 RWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred HHHhcCCCccCCCHHHHhh
Confidence 9999999999999999975
|
|
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.9e-32 Score=297.23 Aligned_cols=244 Identities=26% Similarity=0.361 Sum_probs=198.0
Q ss_pred hCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEE
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLV 573 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV 573 (897)
.+.|..-++||+||||.||-++.+ +|+.+|.|.+.+.. ..+..-.+.|-.+|.+++.+.||.+-..|...+.+|||
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence 456888899999999999999965 68999999986422 23345578899999999999999999999999999999
Q ss_pred EeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcc
Q 002647 574 YELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTAL 653 (897)
Q Consensus 574 ~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~ 653 (897)
+..|.||+|.=+|.+.. +..+++..++.++.+|+.||++||+.+ ||.|||||+|||||+.|+++|+|+|||..+.
T Consensus 264 LtlMNGGDLkfHiyn~g--~~gF~e~ra~FYAAEi~cGLehlH~~~---iVYRDLKPeNILLDd~GhvRISDLGLAvei~ 338 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHG--NPGFDEQRARFYAAEIICGLEHLHRRR---IVYRDLKPENILLDDHGHVRISDLGLAVEIP 338 (591)
T ss_pred EEeecCCceeEEeeccC--CCCCchHHHHHHHHHHHhhHHHHHhcc---eeeccCChhheeeccCCCeEeeccceEEecC
Confidence 99999999999997543 356999999999999999999999988 9999999999999999999999999998764
Q ss_pred cCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccc
Q 002647 654 DEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTII 733 (897)
Q Consensus 654 ~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~ii 733 (897)
+.. ..+..+||.+|||||+++++.|+...|.|||||+||||+.|+.||.... ..+.|. -+
T Consensus 339 ~g~---~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~K-----eKvk~e------------Ev 398 (591)
T KOG0986|consen 339 EGK---PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRK-----EKVKRE------------EV 398 (591)
T ss_pred CCC---ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhh-----hhhhHH------------HH
Confidence 322 2233489999999999999999999999999999999999999995322 122221 11
Q ss_pred cchh---ccCCCHHHHHHHHHHHHHccCCCCCCCCC
Q 002647 734 DPVI---ESNISYDTLVKVAAIASMCVQPEVSHRPF 766 (897)
Q Consensus 734 Dp~l---~~~~~~e~~~~L~~Li~~CL~~dP~~RPT 766 (897)
|.+. ...++..-.++...|.+..|+.||.+|--
T Consensus 399 drr~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLG 434 (591)
T KOG0986|consen 399 DRRTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLG 434 (591)
T ss_pred HHHHhcchhhcccccCHHHHHHHHHHHccCHHHhcc
Confidence 1111 11233334455677888889999998863
|
|
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-31 Score=277.88 Aligned_cols=222 Identities=21% Similarity=0.183 Sum_probs=176.7
Q ss_pred cCceEEEEEEec-CCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccCCcccccccc
Q 002647 510 GGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHG 588 (897)
Q Consensus 510 G~fGtVyka~l~-~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~gGSL~~~L~~ 588 (897)
|.||.||++... +++.+|+|++.... .+.+|...+....|+||+++++++.+.+..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 899999999964 68999999997543 334555666667899999999999999999999999999999999853
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCccccccccccc
Q 002647 589 DDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTF 668 (897)
Q Consensus 589 ~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~~~t~~~GT~ 668 (897)
...+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.++++|||++...... .....++.
T Consensus 79 ----~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~-----~~~~~~~~ 146 (237)
T cd05576 79 ----FLNIPEECVKRWAAEMVVALDALHREG---IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS-----CDGEAVEN 146 (237)
T ss_pred ----hcCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEecccchhccccc-----cccCCcCc
Confidence 235899999999999999999999887 999999999999999999999999987654221 12234567
Q ss_pred ccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhccCCCHHHHHH
Q 002647 669 GYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVK 748 (897)
Q Consensus 669 ~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~ 748 (897)
.|+|||.+....++.++||||+|+++|||++|+.+++...... . . ... ...+......
T Consensus 147 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~------------~--~----~~~----~~~~~~~~~~ 204 (237)
T cd05576 147 MYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI------------N--T----HTT----LNIPEWVSEE 204 (237)
T ss_pred cccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc------------c--c----ccc----cCCcccCCHH
Confidence 8999999888888999999999999999999998875321100 0 0 000 0011122346
Q ss_pred HHHHHHHccCCCCCCCCCHHHH
Q 002647 749 VAAIASMCVQPEVSHRPFMGEV 770 (897)
Q Consensus 749 L~~Li~~CL~~dP~~RPTm~EV 770 (897)
+.+++.+|++.||++|+++.+.
T Consensus 205 ~~~li~~~l~~dp~~R~~~~~~ 226 (237)
T cd05576 205 ARSLLQQLLQFNPTERLGAGVA 226 (237)
T ss_pred HHHHHHHHccCCHHHhcCCCcc
Confidence 7889999999999999997443
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.4e-31 Score=269.83 Aligned_cols=238 Identities=31% Similarity=0.422 Sum_probs=192.4
Q ss_pred CceEEEEEEec-CCCEEEEEEeecccccc-hHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccCCcccccccc
Q 002647 511 GFGVVYRGILD-DGREVAVKVLKRANQHG-GREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHG 588 (897)
Q Consensus 511 ~fGtVyka~l~-~g~~VAVK~lk~~~~~~-~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~gGSL~~~L~~ 588 (897)
+||.||+|+.. +|+.+|+|++....... .+.+.+|++.+++++|+|++++++++......++++||+.+++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999976 48999999998655444 67899999999999999999999999998999999999999999999853
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCccccccccccc
Q 002647 589 DDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTF 668 (897)
Q Consensus 589 ~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~~~t~~~GT~ 668 (897)
. ..+++..++.++.+++++|.|||+.+ |+|+||+|+||++++++.++|+|||++....... ......++.
T Consensus 81 ~----~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~ 150 (244)
T smart00220 81 R----GRLSEDEARFYARQILSALEYLHSNG---IIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGTP 150 (244)
T ss_pred c----cCCCHHHHHHHHHHHHHHHHHHHHcC---eecCCcCHHHeEECCCCcEEEccccceeeecccc---ccccccCCc
Confidence 2 23899999999999999999999987 9999999999999999999999999998654321 233456888
Q ss_pred ccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhccCCCHHHHHH
Q 002647 669 GYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVK 748 (897)
Q Consensus 669 ~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~ 748 (897)
.|++||.+....++.++|||+||+++++|++|..||.... .......+..... .... .........
T Consensus 151 ~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~--~~~~~~~~~~~~~------~~~~------~~~~~~~~~ 216 (244)
T smart00220 151 EYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDD--QLLELFKKIGKPK------PPFP------PPEWKISPE 216 (244)
T ss_pred CCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--cHHHHHHHHhccC------CCCc------cccccCCHH
Confidence 9999999988889999999999999999999999986421 1122222111100 0000 000003356
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHH
Q 002647 749 VAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 749 L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
+.+++.+|+..+|++||++.++++
T Consensus 217 ~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 217 AKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHHHccCCchhccCHHHHhh
Confidence 888999999999999999999975
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.5e-31 Score=306.73 Aligned_cols=260 Identities=27% Similarity=0.426 Sum_probs=211.0
Q ss_pred HHHHHHhhCCceeeeEEeecCceEEEEEE-ecCCCEEEEEEeecccccchHHHHHHHHHHhhc-cCCceeeEeeeeec--
Q 002647 491 LNDIEKATNGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRL-HHRNLVKLFGVCIE-- 566 (897)
Q Consensus 491 ~~ei~~at~~y~~~~~LG~G~fGtVyka~-l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~-- 566 (897)
++.+...++.|++.++||+|.+|.||+++ .++++.+|||++.... ...++...|.++|+.+ +|||++.++|++..
T Consensus 11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~ 89 (953)
T KOG0587|consen 11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKD 89 (953)
T ss_pred hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEEec
Confidence 33344456789999999999999999999 5578999999887543 3347788899999988 69999999999863
Q ss_pred ---CCceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEE
Q 002647 567 ---DNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKV 643 (897)
Q Consensus 567 ---~~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKL 643 (897)
+++++||||||.+||..|++++.. ...+.|..+..|++.++.||.+||... +||||||-.||||+.++.|||
T Consensus 90 ~~~~DqLWLVMEfC~gGSVTDLVKn~~--g~rl~E~~IaYI~re~lrgl~HLH~nk---viHRDikG~NiLLT~e~~VKL 164 (953)
T KOG0587|consen 90 PGNGDQLWLVMEFCGGGSVTDLVKNTK--GNRLKEEWIAYILREILRGLAHLHNNK---VIHRDIKGQNVLLTENAEVKL 164 (953)
T ss_pred CCCCCeEEEEeeccCCccHHHHHhhhc--ccchhhHHHHHHHHHHHHHHHHHhhcc---eeeecccCceEEEeccCcEEE
Confidence 468999999999999999998654 668999999999999999999999887 999999999999999999999
Q ss_pred eccCcchhcccCCCcccccccccccccCChhhhhc-----CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHh
Q 002647 644 SDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMT-----GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAW 718 (897)
Q Consensus 644 sDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~-----~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w 718 (897)
+|||++..... .........||+.|||||++.. ..|+.++|+||||++..||.-|.+|+...-+
T Consensus 165 vDFGvSaQlds--T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHP--------- 233 (953)
T KOG0587|consen 165 VDFGVSAQLDS--TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHP--------- 233 (953)
T ss_pred eeeeeeeeeec--ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcch---------
Confidence 99999986533 2334456789999999999863 3567899999999999999999999854322
Q ss_pred hhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 719 ARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 719 ~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
++.++.. .-+|...-.-+.....++.++|..||..|.++||++.++++.
T Consensus 234 mraLF~I------pRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 234 MRALFLI------PRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred hhhhccC------CCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 1111111 112222223466788899999999999999999999998753
|
|
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-31 Score=284.43 Aligned_cols=247 Identities=26% Similarity=0.338 Sum_probs=197.8
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccccch---HHHHHHHHHHhhccCCceeeEeeeeecCCceEEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQHGG---REFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~~~---~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~ 574 (897)
++|..+++||+|.||+|.+++-+ .|+.+|+|++++.--... ..-+.|-.+|+..+||.+..|...|...+.+|+||
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM 247 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM 247 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence 56778899999999999999954 789999999986443332 34567889999999999999999999999999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
||..||.|.-+|.. ...+++.....+-..|..||.|||+.+ ||.||||.+|+|||.+|++||+||||++....
T Consensus 248 eyanGGeLf~HLsr----er~FsE~RtRFYGaEIvsAL~YLHs~~---ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~ 320 (516)
T KOG0690|consen 248 EYANGGELFFHLSR----ERVFSEDRTRFYGAEIVSALGYLHSRN---IVYRDLKLENLLLDKDGHIKITDFGLCKEEIK 320 (516)
T ss_pred EEccCceEeeehhh----hhcccchhhhhhhHHHHHHhhhhhhCC---eeeeechhhhheeccCCceEeeecccchhccc
Confidence 99999999999853 446888888888999999999999987 99999999999999999999999999986543
Q ss_pred CCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccccccccccc
Q 002647 655 EGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIID 734 (897)
Q Consensus 655 ~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiD 734 (897)
.+ .....++||+.|+|||++....|..+.|.|.+||++|||++|+.||...+......++ +. -|
T Consensus 321 ~g--~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLI------l~--------ed 384 (516)
T KOG0690|consen 321 YG--DTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELI------LM--------ED 384 (516)
T ss_pred cc--ceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHH------Hh--------hh
Confidence 33 3456799999999999999999999999999999999999999999644322111111 00 01
Q ss_pred chhccCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 002647 735 PVIESNISYDTLVKVAAIASMCVQPEVSHRP-----FMGEVVQ 772 (897)
Q Consensus 735 p~l~~~~~~e~~~~L~~Li~~CL~~dP~~RP-----Tm~EVl~ 772 (897)
-+ ++.....+...|+...|..||.+|- .++||.+
T Consensus 385 ~k----FPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~ 423 (516)
T KOG0690|consen 385 LK----FPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMR 423 (516)
T ss_pred cc----CCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHh
Confidence 11 2222223445677788899999995 4555543
|
|
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-31 Score=279.86 Aligned_cols=265 Identities=23% Similarity=0.372 Sum_probs=200.8
Q ss_pred HHHHHHhhCCceeeeEEeecCceEEEEEE-ecCCCEEEEEEeecccccchHHHHHHHHHHhhc-cCCceeeEeeeeecCC
Q 002647 491 LNDIEKATNGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRL-HHRNLVKLFGVCIEDN 568 (897)
Q Consensus 491 ~~ei~~at~~y~~~~~LG~G~fGtVyka~-l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~~ 568 (897)
++|+-+.++ ++||+|+|+.|--++ +.+|.++|||++.+..........+|++++.+. .|+||+.|+++|+++.
T Consensus 75 F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~ 149 (463)
T KOG0607|consen 75 FEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDT 149 (463)
T ss_pred HHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccc
Confidence 445555443 679999999999988 678999999999988777788999999999998 5999999999999999
Q ss_pred ceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCC---ceEEec
Q 002647 569 NRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDF---TPKVSD 645 (897)
Q Consensus 569 ~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~---~vKLsD 645 (897)
.+|||||-|.||+|..+|++ ...+++.++.++..+|+.||.+||..| |.||||||+|||..+-. -+||||
T Consensus 150 ~FYLVfEKm~GGplLshI~~----~~~F~E~EAs~vvkdia~aLdFlH~kg---IAHRDlKPENiLC~~pn~vsPvKiCD 222 (463)
T KOG0607|consen 150 RFYLVFEKMRGGPLLSHIQK----RKHFNEREASRVVKDIASALDFLHTKG---IAHRDLKPENILCESPNKVSPVKICD 222 (463)
T ss_pred eEEEEEecccCchHHHHHHH----hhhccHHHHHHHHHHHHHHHHHHhhcC---cccccCCccceeecCCCCcCceeeec
Confidence 99999999999999999964 456999999999999999999999998 99999999999996543 489999
Q ss_pred cCcchhcccCCC-----cccccccccccccCChhhhh-----cCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhh
Q 002647 646 FGLARTALDEGN-----KHISTHVMGTFGYLAPEYAM-----TGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENL 715 (897)
Q Consensus 646 FGLAr~~~~~~~-----~~~~t~~~GT~~Y~APE~l~-----~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~l 715 (897)
|.|.--...... .......+|+..|||||+.. ...|+.++|.||||||||-||+|..||.+.=.. -
T Consensus 223 fDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~----d 298 (463)
T KOG0607|consen 223 FDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGA----D 298 (463)
T ss_pred cccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCC----c
Confidence 988753221111 12223467889999999864 235788999999999999999999999653221 1
Q ss_pred HHhhhhcccccccccccccchhccC--CCH----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 716 VAWARPLLTTKEGLKTIIDPVIESN--ISY----DTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 716 v~w~~~l~~~~e~l~~iiDp~l~~~--~~~----e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
..|.+.-... ..-..++...-.+. ++. ....+..+++...+..|+.+|-++..+++
T Consensus 299 CGWdrGe~Cr-~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 299 CGWDRGEVCR-VCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred CCccCCCccH-HHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 2233221110 00011111111111 222 22345567888888899999999888876
|
|
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-31 Score=277.69 Aligned_cols=247 Identities=27% Similarity=0.445 Sum_probs=191.9
Q ss_pred eeEEeecCceEEEEEEec-CCCEEEEEEeec-ccccchHHHHHHHHHHhhcc-CCceeeEeeeeecCCceEEEEeeccCC
Q 002647 504 SRIIGEGGFGVVYRGILD-DGREVAVKVLKR-ANQHGGREFLAELEMLSRLH-HRNLVKLFGVCIEDNNRCLVYELIHNG 580 (897)
Q Consensus 504 ~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~-~~~~~~~~f~~Ev~iL~~L~-HpNIV~Llg~~~~~~~~~LV~Ey~~gG 580 (897)
+..||.|..|.||+++.. .|..+|||.+.+ .+.+..+.++..++++.+-+ +|+||+.+|+|..+...++.||.|.-
T Consensus 97 l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~- 175 (391)
T KOG0983|consen 97 LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMST- 175 (391)
T ss_pred HHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHH-
Confidence 467999999999999965 589999999975 34445567777888877664 89999999999999999999999853
Q ss_pred ccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCccc
Q 002647 581 SLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHI 660 (897)
Q Consensus 581 SL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~~ 660 (897)
.++.+|+ ...+++++..+-++...+.+||.||-+.. .|||||+||+|||+|+.|++||||||++-.+.+ ...
T Consensus 176 C~ekLlk---rik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvd---SkA 247 (391)
T KOG0983|consen 176 CAEKLLK---RIKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVD---SKA 247 (391)
T ss_pred HHHHHHH---HhcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeec---ccc
Confidence 4555553 23467999999999999999999998765 599999999999999999999999999876543 234
Q ss_pred ccccccccccCChhhhhc---CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchh
Q 002647 661 STHVMGTFGYLAPEYAMT---GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVI 737 (897)
Q Consensus 661 ~t~~~GT~~Y~APE~l~~---~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l 737 (897)
.++.+|-+.|||||.+.- ..|+.++||||||+.|+||.||+.||...+.+ .+-+ ...+. .....++...
T Consensus 248 htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td-Fe~l----tkvln---~ePP~L~~~~ 319 (391)
T KOG0983|consen 248 HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD-FEVL----TKVLN---EEPPLLPGHM 319 (391)
T ss_pred cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc-HHHH----HHHHh---cCCCCCCccc
Confidence 456789999999998863 47888999999999999999999999754321 1111 11111 1111121111
Q ss_pred ccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 738 ESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 738 ~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
.-...+.+++..||+.|+.+||...++++.
T Consensus 320 ------gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 320 ------GFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred ------CcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 133568899999999999999999998764
|
|
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-31 Score=280.30 Aligned_cols=206 Identities=27% Similarity=0.352 Sum_probs=171.6
Q ss_pred hCCceeeeEEeecCceEEEEEEecC-----CCEEEEEEeecccc--cchHHHHHHHHHHhhccCCceeeEeeeeec-CCc
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILDD-----GREVAVKVLKRANQ--HGGREFLAELEMLSRLHHRNLVKLFGVCIE-DNN 569 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~~-----g~~VAVK~lk~~~~--~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~-~~~ 569 (897)
...|+....||+|.||.||||+-++ ...+|+|.++.... .......+|+.+++.|+|+||+.|..++.+ +..
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK 102 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence 3468888999999999999997432 23789999986432 223568899999999999999999999987 778
Q ss_pred eEEEEeeccCCccccccccCCC-CCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccC----CceEEe
Q 002647 570 RCLVYELIHNGSLESHLHGDDK-VNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHD----FTPKVS 644 (897)
Q Consensus 570 ~~LV~Ey~~gGSL~~~L~~~~~-~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~----~~vKLs 644 (897)
.+|++||.+. +|+..|+..+. ....++...+..|+.||+.|+.|||++- |+||||||.||||..+ |.|||+
T Consensus 103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW---vlHRDLKPaNIlvmgdgperG~VKIa 178 (438)
T KOG0666|consen 103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW---VLHRDLKPANILVMGDGPERGRVKIA 178 (438)
T ss_pred EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh---eeeccCCcceEEEeccCCccCeeEee
Confidence 8999999987 88888864332 2357889999999999999999999998 9999999999999877 999999
Q ss_pred ccCcchhcccCCCcc-cccccccccccCChhhhhcC-CCCccccEEechhHHHHHHhCCCCCCCC
Q 002647 645 DFGLARTALDEGNKH-ISTHVMGTFGYLAPEYAMTG-HLLVKSDVYSYGVVLLELLTGRKPVDLS 707 (897)
Q Consensus 645 DFGLAr~~~~~~~~~-~~t~~~GT~~Y~APE~l~~~-~~t~kSDVwSfGvIL~ELlTGk~Pfd~~ 707 (897)
|||++|.+.+.-... ....++-|+.|.|||.+.+. .||.+.|||+.|||+.||+|-++-|.+.
T Consensus 179 DlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~ 243 (438)
T KOG0666|consen 179 DLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGR 243 (438)
T ss_pred cccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccch
Confidence 999999875433322 33457789999999998875 6789999999999999999988877544
|
|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-31 Score=315.55 Aligned_cols=258 Identities=22% Similarity=0.286 Sum_probs=205.9
Q ss_pred cHHHHHHhhCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecc---cccchHHHHHHHHHHhhccCCceeeEeeeee
Q 002647 490 TLNDIEKATNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRA---NQHGGREFLAELEMLSRLHHRNLVKLFGVCI 565 (897)
Q Consensus 490 ~~~ei~~at~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~---~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~ 565 (897)
...+++...++|.++++||+|+||.|..++.+ +++.+|+|++.+. .......|..|-++|..-+.+=|+.|...|.
T Consensus 66 ~v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQ 145 (1317)
T KOG0612|consen 66 KVKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQ 145 (1317)
T ss_pred HHHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhc
Confidence 34567777899999999999999999999975 6788999999873 2344567889999999999999999999999
Q ss_pred cCCceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEec
Q 002647 566 EDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSD 645 (897)
Q Consensus 566 ~~~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsD 645 (897)
+++.+|+|||||+||+|-.+|... .+++++.+..++..|.-||+-||+.| +|||||||+|||||..|++||+|
T Consensus 146 D~~~LYlVMdY~pGGDlltLlSk~----~~~pE~~ArFY~aEiVlAldslH~mg---yVHRDiKPDNvLld~~GHikLAD 218 (1317)
T KOG0612|consen 146 DERYLYLVMDYMPGGDLLTLLSKF----DRLPEDWARFYTAEIVLALDSLHSMG---YVHRDIKPDNVLLDKSGHIKLAD 218 (1317)
T ss_pred CccceEEEEecccCchHHHHHhhc----CCChHHHHHHHHHHHHHHHHHHHhcc---ceeccCCcceeEecccCcEeecc
Confidence 999999999999999999999532 37999999999999999999999998 99999999999999999999999
Q ss_pred cCcchhcccCCCcccccccccccccCChhhhhc-----CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhh
Q 002647 646 FGLARTALDEGNKHISTHVMGTFGYLAPEYAMT-----GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWAR 720 (897)
Q Consensus 646 FGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~-----~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~ 720 (897)
||.+-.+..++. -.....+|||.|++||++.. +.|...+|.||+||++|||+.|..||.. .+++.--.
T Consensus 219 FGsClkm~~dG~-V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa------dslveTY~ 291 (1317)
T KOG0612|consen 219 FGSCLKMDADGT-VRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA------DSLVETYG 291 (1317)
T ss_pred chhHHhcCCCCc-EEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH------HHHHHHHH
Confidence 999877654433 34456789999999999872 6788999999999999999999999963 33433222
Q ss_pred hcccccccccccccchhccCCC--HHHHHHHHHHHHHccCCCCCCCCC---HHHHHH
Q 002647 721 PLLTTKEGLKTIIDPVIESNIS--YDTLVKVAAIASMCVQPEVSHRPF---MGEVVQ 772 (897)
Q Consensus 721 ~l~~~~e~l~~iiDp~l~~~~~--~e~~~~L~~Li~~CL~~dP~~RPT---m~EVl~ 772 (897)
.++.-++. -.++ .+...+..+||++.+. +++.|-. +.++-.
T Consensus 292 KIm~hk~~----------l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~ 337 (1317)
T KOG0612|consen 292 KIMNHKES----------LSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKN 337 (1317)
T ss_pred HHhchhhh----------cCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHh
Confidence 22221111 1122 2344566677777554 5667766 666644
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-29 Score=296.20 Aligned_cols=262 Identities=21% Similarity=0.276 Sum_probs=181.8
Q ss_pred hhCCceeeeEEeecCceEEEEEEe-----------------cCCCEEEEEEeecccccchHHH--------------HHH
Q 002647 497 ATNGFHTSRIIGEGGFGVVYRGIL-----------------DDGREVAVKVLKRANQHGGREF--------------LAE 545 (897)
Q Consensus 497 at~~y~~~~~LG~G~fGtVyka~l-----------------~~g~~VAVK~lk~~~~~~~~~f--------------~~E 545 (897)
..++|.+.++||+|+||+||+|.+ .+++.||||+++.......++| ..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999964 2356899999875443322333 347
Q ss_pred HHHHhhccCCce-----eeEeeeeec--------CCceEEEEeeccCCccccccccCCC--------------------C
Q 002647 546 LEMLSRLHHRNL-----VKLFGVCIE--------DNNRCLVYELIHNGSLESHLHGDDK--------------------V 592 (897)
Q Consensus 546 v~iL~~L~HpNI-----V~Llg~~~~--------~~~~~LV~Ey~~gGSL~~~L~~~~~--------------------~ 592 (897)
+.++.+++|.++ ++++++|.. ++..+|||||+++|+|.++|+.... .
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777888877654 677787753 3567999999999999999874211 1
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcccccccccccccCC
Q 002647 593 NGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLA 672 (897)
Q Consensus 593 ~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~A 672 (897)
...++|..+..++.|++++|.|||+.+ |+||||||+|||++.++.+||+|||+++....... .......+|+.|+|
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~---ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~-~~~~~g~~tp~Y~a 378 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIG---IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN-FNPLYGMLDPRYSP 378 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCchHhEEECCCCcEEEEeCcCccccccCCc-cCccccCCCcceeC
Confidence 123578889999999999999999887 99999999999999999999999999975432211 11122345789999
Q ss_pred hhhhhcCC----------------------CCccccEEechhHHHHHHhCCC-CCCCCCCCC------chhhHHhhhhcc
Q 002647 673 PEYAMTGH----------------------LLVKSDVYSYGVVLLELLTGRK-PVDLSQPPG------QENLVAWARPLL 723 (897)
Q Consensus 673 PE~l~~~~----------------------~t~kSDVwSfGvIL~ELlTGk~-Pfd~~~~~~------~~~lv~w~~~l~ 723 (897)
||.+.... ...+.||||+|||++||++|.. |+....... ..++..|...
T Consensus 379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~-- 456 (507)
T PLN03224 379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMY-- 456 (507)
T ss_pred hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhh--
Confidence 99875322 1235799999999999999875 664221100 0111112110
Q ss_pred cccccccccccchhccCCCHHHHHHHHHHHHHccCCCC---CCCCCHHHHHHH
Q 002647 724 TTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEV---SHRPFMGEVVQA 773 (897)
Q Consensus 724 ~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP---~~RPTm~EVl~~ 773 (897)
... -.+-. ..........+++.+++..++ .+|+++.|++++
T Consensus 457 ~~~-----~~~~~----~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 457 KGQ-----KYDFS----LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred ccc-----CCCcc----cccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 000 00000 011223456788899998765 689999999763
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.7e-30 Score=301.84 Aligned_cols=262 Identities=18% Similarity=0.202 Sum_probs=170.7
Q ss_pred hhCCceeeeEEeecCceEEEEEEec-C----CCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeee------ee
Q 002647 497 ATNGFHTSRIIGEGGFGVVYRGILD-D----GREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGV------CI 565 (897)
Q Consensus 497 at~~y~~~~~LG~G~fGtVyka~l~-~----g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~------~~ 565 (897)
..++|.+.++||+|+||.||+|++. + +..||||+++..... +.+..| .+....+.++..++.. +.
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 5678999999999999999999975 4 689999998643221 111111 1222222233222221 24
Q ss_pred cCCceEEEEeeccCCccccccccCCCC----------------CCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCC
Q 002647 566 EDNNRCLVYELIHNGSLESHLHGDDKV----------------NGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFK 629 (897)
Q Consensus 566 ~~~~~~LV~Ey~~gGSL~~~L~~~~~~----------------~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIK 629 (897)
.+...++||||+.+++|.+++...... ........+..|+.||+.||+|||+.+ |+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g---IiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG---IVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC---EEeCcCC
Confidence 556789999999999999988642110 001123446679999999999999887 9999999
Q ss_pred CCcEEEcc-CCceEEeccCcchhcccCCCcccccccccccccCChhhhhcC----------------------CCCcccc
Q 002647 630 SSNILLEH-DFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTG----------------------HLLVKSD 686 (897)
Q Consensus 630 psNILLd~-~~~vKLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~----------------------~~t~kSD 686 (897)
|+|||+++ ++.+||+|||+++..... .........+++.|+|||.+... .++.++|
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~-~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D 361 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVG-INYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD 361 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccc-cccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence 99999986 579999999999864322 22333456789999999965322 2445779
Q ss_pred EEechhHHHHHHhCCCCCCCCCCC-------CchhhHHhhhhcccccccccccccchhccCC--CHHHHHHHHHHHHHcc
Q 002647 687 VYSYGVVLLELLTGRKPVDLSQPP-------GQENLVAWARPLLTTKEGLKTIIDPVIESNI--SYDTLVKVAAIASMCV 757 (897)
Q Consensus 687 VwSfGvIL~ELlTGk~Pfd~~~~~-------~~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~--~~e~~~~L~~Li~~CL 757 (897)
||||||+||||+++..+++..... ...++..|...... ...+.+...+ .........+|+.+||
T Consensus 362 VwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~d~~~~~~~dLi~~mL 434 (566)
T PLN03225 362 IYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEP-------RASPDLRRGFEVLDLDGGAGWELLKSMM 434 (566)
T ss_pred cHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhcc-------ccchhhhhhhhhccccchHHHHHHHHHc
Confidence 999999999999987765421000 00111222111100 0000000000 0011223458999999
Q ss_pred CCCCCCCCCHHHHHHH
Q 002647 758 QPEVSHRPFMGEVVQA 773 (897)
Q Consensus 758 ~~dP~~RPTm~EVl~~ 773 (897)
+.||++|||+.|+++.
T Consensus 435 ~~dP~kR~ta~e~L~H 450 (566)
T PLN03225 435 RFKGRQRISAKAALAH 450 (566)
T ss_pred cCCcccCCCHHHHhCC
Confidence 9999999999999864
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-30 Score=285.63 Aligned_cols=257 Identities=27% Similarity=0.413 Sum_probs=194.7
Q ss_pred hCCceeeeEEeecCceEEEEEE-ecCCCEEEEEEeec---cccc----chHHHHHHHHHHhhccCCceeeEeeeeec-CC
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKR---ANQH----GGREFLAELEMLSRLHHRNLVKLFGVCIE-DN 568 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~-l~~g~~VAVK~lk~---~~~~----~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~-~~ 568 (897)
.++|.++.+||+|||++||||. +...+.||||+-.. +.+. ..+...+|..|-+.|+|+.||+++++|.- .+
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd 541 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD 541 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence 3568888999999999999999 45678899998532 2111 12346789999999999999999999864 56
Q ss_pred ceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEcc---CCceEEec
Q 002647 569 NRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEH---DFTPKVSD 645 (897)
Q Consensus 569 ~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~---~~~vKLsD 645 (897)
.+|-|+|||+|.+|+=||+ ....+++.++..|++||+.||.||.+. .++|||-||||.||||.+ -|.+||.|
T Consensus 542 sFCTVLEYceGNDLDFYLK----QhklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITD 616 (775)
T KOG1151|consen 542 SFCTVLEYCEGNDLDFYLK----QHKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITD 616 (775)
T ss_pred cceeeeeecCCCchhHHHH----hhhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeee
Confidence 7899999999999999994 345689999999999999999999987 588999999999999954 47899999
Q ss_pred cCcchhcccCCCc-----ccccccccccccCChhhhhcC----CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhH
Q 002647 646 FGLARTALDEGNK-----HISTHVMGTFGYLAPEYAMTG----HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLV 716 (897)
Q Consensus 646 FGLAr~~~~~~~~-----~~~t~~~GT~~Y~APE~l~~~----~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv 716 (897)
|||++.+.++.+. ..+...+||.+|++||++.-+ +.+.|.||||.|||+|..+.|++||..... ..++.
T Consensus 617 FGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqs--QQdIL 694 (775)
T KOG1151|consen 617 FGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQS--QQDIL 694 (775)
T ss_pred cchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchh--HHHHH
Confidence 9999977554433 344567899999999987643 568899999999999999999999964432 12222
Q ss_pred HhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 002647 717 AWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVV 771 (897)
Q Consensus 717 ~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl 771 (897)
..... +...+ + -+.+ -.....+..++|++||+..-++|-...++.
T Consensus 695 qeNTI-lkAtE-V--qFP~------KPvVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 695 QENTI-LKATE-V--QFPP------KPVVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred hhhch-hccee-c--cCCC------CCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 11111 11000 0 0000 011223456899999999988887665543
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-30 Score=287.71 Aligned_cols=245 Identities=27% Similarity=0.370 Sum_probs=195.1
Q ss_pred eeEEeecCceEEEEEEe-cCCCEEEEEEeeccc--ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccCC
Q 002647 504 SRIIGEGGFGVVYRGIL-DDGREVAVKVLKRAN--QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNG 580 (897)
Q Consensus 504 ~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~gG 580 (897)
.++||.|-||+||-|+. ++|+.||||+|.+.. .....++.+|+.+|++++||.||.|.-.|+..+..++|||-+.|.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 57899999999999995 579999999997633 445578999999999999999999999999999999999999775
Q ss_pred ccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccC---CceEEeccCcchhcccCCC
Q 002647 581 SLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHD---FTPKVSDFGLARTALDEGN 657 (897)
Q Consensus 581 SL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~---~~vKLsDFGLAr~~~~~~~ 657 (897)
-|.-.|. ...++|++..-..++.||+.||.|||..+ |+|.||||+||||.+. -++||||||+||.+.+
T Consensus 649 MLEMILS---sEkgRL~er~TkFlvtQIL~ALr~LH~kn---IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE--- 719 (888)
T KOG4236|consen 649 MLEMILS---SEKGRLPERITKFLVTQILVALRYLHFKN---IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE--- 719 (888)
T ss_pred HHHHHHH---hhcccchHHHHHHHHHHHHHHHHHhhhcc---eeeccCCchheeeccCCCCCceeeccccceeecch---
Confidence 5665553 34578999999999999999999999998 9999999999999654 4799999999998743
Q ss_pred cccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchh
Q 002647 658 KHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVI 737 (897)
Q Consensus 658 ~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l 737 (897)
......+.||+.|+|||++.++.|...-|+||.|||+|.-++|..||+.... ..+-++.+.. +..+..
T Consensus 720 ksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEd--IndQIQNAaF----------MyPp~P 787 (888)
T KOG4236|consen 720 KSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDED--INDQIQNAAF----------MYPPNP 787 (888)
T ss_pred hhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccc--hhHHhhcccc----------ccCCCc
Confidence 3345568999999999999999999999999999999999999999974322 1111111111 111111
Q ss_pred ccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 738 ESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 738 ~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
- .+.....+++|...|+..-.+|-+....+..
T Consensus 788 W----~eis~~AidlIn~LLqVkm~kRysvdk~lsh 819 (888)
T KOG4236|consen 788 W----SEISPEAIDLINNLLQVKMRKRYSVDKSLSH 819 (888)
T ss_pred h----hhcCHHHHHHHHHHHHHHHHHhcchHhhccc
Confidence 1 1223445678888888888888887776543
|
|
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.9e-30 Score=271.17 Aligned_cols=251 Identities=22% Similarity=0.260 Sum_probs=193.8
Q ss_pred hhCCceee-eEEeecCceEEEEEEec-CCCEEEEEEeecccccchHHHHHHHHHHhhc-cCCceeeEeeeeec----CCc
Q 002647 497 ATNGFHTS-RIIGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLAELEMLSRL-HHRNLVKLFGVCIE----DNN 569 (897)
Q Consensus 497 at~~y~~~-~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~----~~~ 569 (897)
.+++|.+. ++||-|-.|.|-.+..+ +|+.+|+|++... ....+|+++--+. .|+|||.++++|.. ...
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc 133 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKC 133 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence 45566554 57999999999999865 7899999998754 4457888876555 69999999999864 346
Q ss_pred eEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEc---cCCceEEecc
Q 002647 570 RCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLE---HDFTPKVSDF 646 (897)
Q Consensus 570 ~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd---~~~~vKLsDF 646 (897)
+.+|||+|+||.|+..|... ....+++.++..|..||+.|+.|||..+ |.||||||+|+|.. .|-.+||+||
T Consensus 134 LLiVmE~meGGeLfsriq~~--g~~afTErea~eI~~qI~~Av~~lH~~n---IAHRDlKpENLLyt~t~~na~lKLtDf 208 (400)
T KOG0604|consen 134 LLIVMECMEGGELFSRIQDR--GDQAFTEREASEIMKQIGLAVRYLHSMN---IAHRDLKPENLLYTTTSPNAPLKLTDF 208 (400)
T ss_pred eEeeeecccchHHHHHHHHc--ccccchHHHHHHHHHHHHHHHHHHHhcc---hhhccCChhheeeecCCCCcceEeccc
Confidence 67899999999999999643 3457999999999999999999999887 99999999999996 4567999999
Q ss_pred CcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccc
Q 002647 647 GLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTK 726 (897)
Q Consensus 647 GLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~ 726 (897)
|+|+.... .......+-|++|.|||++-..+|+..+|+||+||++|-|++|.+||......- + .
T Consensus 209 GFAK~t~~---~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~a---i----------s 272 (400)
T KOG0604|consen 209 GFAKETQE---PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA---I----------S 272 (400)
T ss_pred ccccccCC---CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCcc---C----------C
Confidence 99986432 223345678999999999999999999999999999999999999996332100 0 0
Q ss_pred cccc-ccccchh--ccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 727 EGLK-TIIDPVI--ESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 727 e~l~-~iiDp~l--~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
.+++ .|..... ....-....+...++|+..|..+|.+|-|+.|+++.
T Consensus 273 pgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 273 PGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred hhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 0000 0000000 001112334567789999999999999999998754
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.9e-30 Score=294.71 Aligned_cols=241 Identities=24% Similarity=0.288 Sum_probs=193.5
Q ss_pred hhCCceeeeEEeecCceEEEEEEe-cCCCEEEEEEeecccccchHHHHHHHHHHhhc-cCCceeeEeeeeecCCceEEEE
Q 002647 497 ATNGFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRANQHGGREFLAELEMLSRL-HHRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 497 at~~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~~~~~LV~ 574 (897)
.++.|.....+|.|+|+.|-.+.. .+++..+||++.+.. .+-.+|+.++... +|+||+++.+.+.+..+.++||
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~ 395 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVM 395 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeee
Confidence 366788888899999999999985 468899999997652 2345677676665 7999999999999999999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEE-ccCCceEEeccCcchhcc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILL-EHDFTPKVSDFGLARTAL 653 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILL-d~~~~vKLsDFGLAr~~~ 653 (897)
|++.+|-|.+.+... +....++..|+.+|+.++.|||.++ ||||||||+|||+ ++.++++|+|||.++...
T Consensus 396 e~l~g~ell~ri~~~-----~~~~~e~~~w~~~lv~Av~~LH~~g---vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~ 467 (612)
T KOG0603|consen 396 ELLDGGELLRRIRSK-----PEFCSEASQWAAELVSAVDYLHEQG---VVHRDLKPGNILLDGSAGHLRLTYFGFWSELE 467 (612)
T ss_pred hhccccHHHHHHHhc-----chhHHHHHHHHHHHHHHHHHHHhcC---eeecCCChhheeecCCCCcEEEEEechhhhCc
Confidence 999999988887532 2223778889999999999999988 9999999999999 589999999999998653
Q ss_pred cCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccc
Q 002647 654 DEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTII 733 (897)
Q Consensus 654 ~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~ii 733 (897)
.. ....+-|..|.|||++....|++++|+||||++||+||+|+.||.....+ .++..-
T Consensus 468 ~~-----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~--~ei~~~--------------- 525 (612)
T KOG0603|consen 468 RS-----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG--IEIHTR--------------- 525 (612)
T ss_pred hh-----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch--HHHHHh---------------
Confidence 32 22345688999999999999999999999999999999999999754332 111111
Q ss_pred cchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 734 DPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 734 Dp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
.....++........+|+.+||+.||.+|++|.++...
T Consensus 526 --i~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 526 --IQMPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred --hcCCccccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence 00111223334556789999999999999999998654
|
|
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-31 Score=279.13 Aligned_cols=253 Identities=25% Similarity=0.364 Sum_probs=189.8
Q ss_pred eeEEeecCceEEEEEEec-CCCEEEEEEeecccc-cchHHHHHHHHHHhhc-cCCceeeEeeeeecCCceEEEEeeccCC
Q 002647 504 SRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQ-HGGREFLAELEMLSRL-HHRNLVKLFGVCIEDNNRCLVYELIHNG 580 (897)
Q Consensus 504 ~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~-~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~~~~~LV~Ey~~gG 580 (897)
+..||.|+||+|+|-.++ .|+..|||+++.... ...++++.|.+...+- +.+|||+++|.+..++..++.||.|+-
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~- 147 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDI- 147 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhh-
Confidence 367999999999999965 699999999986443 4556788898876665 799999999999999999999999964
Q ss_pred cccccccc-CCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcc
Q 002647 581 SLESHLHG-DDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH 659 (897)
Q Consensus 581 SL~~~L~~-~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~ 659 (897)
||+.+... .......++++..-.|.....+||+||-+.- .||||||||+|||||..|.+||||||.+-.+.+ .-
T Consensus 148 SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~---Si 222 (361)
T KOG1006|consen 148 SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVD---SI 222 (361)
T ss_pred hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHH---HH
Confidence 55443321 0122456888888899999999999998764 699999999999999999999999999875532 22
Q ss_pred cccccccccccCChhhhhc--CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchh
Q 002647 660 ISTHVMGTFGYLAPEYAMT--GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVI 737 (897)
Q Consensus 660 ~~t~~~GT~~Y~APE~l~~--~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l 737 (897)
..+.-+|-..|||||.+.. ..|+-+|||||||+.|+|+.||+.|+...+. ..+-...... ++ ..++..
T Consensus 223 AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s-----vfeql~~Vv~-gd--pp~l~~-- 292 (361)
T KOG1006|consen 223 AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS-----VFEQLCQVVI-GD--PPILLF-- 292 (361)
T ss_pred HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH-----HHHHHHHHHc-CC--CCeecC--
Confidence 3344567788999998864 3488999999999999999999999964321 1111111110 11 111111
Q ss_pred ccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 738 ESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 738 ~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
..-..+....+..++..|+..|-.+||...++.++
T Consensus 293 -~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 293 -DKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred -cccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 11122345678899999999999999999997653
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.3e-30 Score=279.52 Aligned_cols=241 Identities=24% Similarity=0.352 Sum_probs=192.8
Q ss_pred hCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccccc---chHHHHHHHHHHhhc-cCCceeeEeeeeecCCceEE
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQH---GGREFLAELEMLSRL-HHRNLVKLFGVCIEDNNRCL 572 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~---~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~~~~~L 572 (897)
..+|..+.+||+|+||+|.+|..+ +.+.+|||++++.-.. +.+--+.|-++|.-. +-|.++.+..+|..-+.+|+
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF 427 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF 427 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence 456888999999999999999966 4567999999864322 223345666677665 56788999999999999999
Q ss_pred EEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhc
Q 002647 573 VYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTA 652 (897)
Q Consensus 573 V~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~ 652 (897)
||||+.||+|--+|+. -+.+.+..+..+|..||-||-+||+.+ ||.||||.+|||||.+|++||+|||+++..
T Consensus 428 VMEyvnGGDLMyhiQQ----~GkFKEp~AvFYAaEiaigLFFLh~kg---IiYRDLKLDNvmLd~eGHiKi~DFGmcKEn 500 (683)
T KOG0696|consen 428 VMEYVNGGDLMYHIQQ----VGKFKEPVAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEN 500 (683)
T ss_pred EEEEecCchhhhHHHH----hcccCCchhhhhhHHHHHHhhhhhcCC---eeeeeccccceEeccCCceEeeeccccccc
Confidence 9999999999888843 456888889999999999999999998 999999999999999999999999999854
Q ss_pred ccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccccccccc
Q 002647 653 LDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTI 732 (897)
Q Consensus 653 ~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~i 732 (897)
.-++ ..+..++||+.|+|||++..++|....|.|||||+||||+.|+.||++.+.+ .+ .+.|
T Consensus 501 i~~~--~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~---el-------------F~aI 562 (683)
T KOG0696|consen 501 IFDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED---EL-------------FQAI 562 (683)
T ss_pred ccCC--cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHH---HH-------------HHHH
Confidence 3322 3445789999999999999999999999999999999999999999865432 11 1222
Q ss_pred ccchhccCCCHHHHHHHHHHHHHccCCCCCCCC
Q 002647 733 IDPVIESNISYDTLVKVAAIASMCVQPEVSHRP 765 (897)
Q Consensus 733 iDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RP 765 (897)
.+... .++.....+...|....+...|.+|-
T Consensus 563 ~ehnv--syPKslSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 563 MEHNV--SYPKSLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred HHccC--cCcccccHHHHHHHHHHhhcCCcccc
Confidence 22222 13444445566788888888998884
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-29 Score=282.79 Aligned_cols=213 Identities=29% Similarity=0.407 Sum_probs=175.3
Q ss_pred CCceeeeEEeecCceEEEEEEe-cCCCEEEEEEeecccc---cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRANQ---HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~~~---~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~ 574 (897)
.-|..++.||-|+||+|.++.. ++...+|+|.|++.+. ......+.|-+||..-+.+=||+|+..|.+++.+|+||
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 3477789999999999999984 4567799999976543 23345778999999999999999999999999999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcc-
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTAL- 653 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~- 653 (897)
||++||++-.+|.. .+-+.+..+..++..+..|+++.|+.| +|||||||+|||||.+|++||.||||+.-+.
T Consensus 709 dYIPGGDmMSLLIr----mgIFeE~LARFYIAEltcAiesVHkmG---FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRW 781 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIR----MGIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 781 (1034)
T ss_pred eccCCccHHHHHHH----hccCHHHHHHHHHHHHHHHHHHHHhcc---ceecccCccceEEccCCceeeeecccccccee
Confidence 99999999998853 356788888888999999999999998 9999999999999999999999999985210
Q ss_pred -------cCCC-----------------c---------------ccccccccccccCChhhhhcCCCCccccEEechhHH
Q 002647 654 -------DEGN-----------------K---------------HISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVL 694 (897)
Q Consensus 654 -------~~~~-----------------~---------------~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL 694 (897)
..++ . ...-..+||+.|+|||++....++.-+|.||.||||
T Consensus 782 THdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil 861 (1034)
T KOG0608|consen 782 THDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVIL 861 (1034)
T ss_pred ccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHH
Confidence 0000 0 001124799999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCC-chhhHHh
Q 002647 695 LELLTGRKPVDLSQPPG-QENLVAW 718 (897)
Q Consensus 695 ~ELlTGk~Pfd~~~~~~-~~~lv~w 718 (897)
|||+.|+.||-...+.+ +..++.|
T Consensus 862 ~em~~g~~pf~~~tp~~tq~kv~nw 886 (1034)
T KOG0608|consen 862 YEMLVGQPPFLADTPGETQYKVINW 886 (1034)
T ss_pred HHHhhCCCCccCCCCCcceeeeeeh
Confidence 99999999997655443 3344455
|
|
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.4e-29 Score=246.71 Aligned_cols=264 Identities=23% Similarity=0.304 Sum_probs=193.2
Q ss_pred CceeeeEEeecCceEEEEEEe-cCCCEEEEEEeeccc--ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 500 GFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRAN--QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
+|...++||+|.||+||||+. ++++.||+|+++-.+ +......++|+-+|+.|+|.|||+++++...++..-||+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 455668999999999999995 468899999987433 33345789999999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
|.. +|..+.. .-++.++.+.+..++.|+++||.++|.++ +.|||+||.|+||+.||++|++|||+++.+.-.
T Consensus 83 cdq-dlkkyfd---slng~~d~~~~rsfmlqllrgl~fchshn---vlhrdlkpqnllin~ngelkladfglarafgip- 154 (292)
T KOG0662|consen 83 CDQ-DLKKYFD---SLNGDLDPEIVRSFMLQLLRGLGFCHSHN---VLHRDLKPQNLLINRNGELKLADFGLARAFGIP- 154 (292)
T ss_pred hhH-HHHHHHH---hcCCcCCHHHHHHHHHHHHhhhhhhhhhh---hhhccCCcceEEeccCCcEEecccchhhhcCCc-
Confidence 965 8888874 34677999999999999999999999987 999999999999999999999999999975321
Q ss_pred CcccccccccccccCChhhhhcCC-CCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhccccc--cccccc
Q 002647 657 NKHISTHVMGTFGYLAPEYAMTGH-LLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTK--EGLKTI 732 (897)
Q Consensus 657 ~~~~~t~~~GT~~Y~APE~l~~~~-~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~--e~l~~i 732 (897)
........-|..|.+|.++.+.+ |+...|+||-|||+.||.. |++-|.+.+-.++..-+-|.-.....+ ..+..+
T Consensus 155 -vrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~l 233 (292)
T KOG0662|consen 155 -VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKL 233 (292)
T ss_pred -eEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccC
Confidence 11223345689999999998765 5678899999999999987 555555444333222222222111111 112222
Q ss_pred ccchhccCCCH-----HHH----HHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 733 IDPVIESNISY-----DTL----VKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 733 iDp~l~~~~~~-----e~~----~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
-|-....-++. +.+ ..=.+++...+.-+|.+|.++.+.++
T Consensus 234 pdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 234 PDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred CCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 22221111110 111 12245666667778999998887654
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.3e-29 Score=290.68 Aligned_cols=247 Identities=28% Similarity=0.364 Sum_probs=187.2
Q ss_pred ceeeeEEeecCceE-EEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhc-cCCceeeEeeeeecCCceEEEEeecc
Q 002647 501 FHTSRIIGEGGFGV-VYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRL-HHRNLVKLFGVCIEDNNRCLVYELIH 578 (897)
Q Consensus 501 y~~~~~LG~G~fGt-Vyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~~~~~LV~Ey~~ 578 (897)
|...+++|.|+.|+ ||+|..+ |+.||||++-... ..-..+|+..|+.- +|+|||++++.-.+++..|++.|.|.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~ 586 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA 586 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeC-CceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence 44456799999985 8999997 8999999986432 23457899999988 69999999999999999999999996
Q ss_pred CCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEcc-----CCceEEeccCcchhcc
Q 002647 579 NGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEH-----DFTPKVSDFGLARTAL 653 (897)
Q Consensus 579 gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~-----~~~vKLsDFGLAr~~~ 653 (897)
. +|.+++...............+.++.|+++||++||..+ ||||||||.||||+. ...++|+|||+++...
T Consensus 587 ~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~---iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~ 662 (903)
T KOG1027|consen 587 C-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK---IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA 662 (903)
T ss_pred h-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc---cccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence 5 999999753111111222455778999999999999887 999999999999975 3579999999999875
Q ss_pred cCCCc-ccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhC-CCCCCCCCCCCchhhHHhhhhcccccccccc
Q 002647 654 DEGNK-HISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTG-RKPVDLSQPPGQENLVAWARPLLTTKEGLKT 731 (897)
Q Consensus 654 ~~~~~-~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTG-k~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~ 731 (897)
.+... .......||-+|+|||.+....-+.+.||||+|||+|+.++| ..||...- ..+.|++ .....+..
T Consensus 663 ~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~-~R~~NIl-------~~~~~L~~ 734 (903)
T KOG1027|consen 663 GGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSL-ERQANIL-------TGNYTLVH 734 (903)
T ss_pred CCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchH-Hhhhhhh-------cCccceee
Confidence 44332 224467899999999999988888899999999999999995 89996321 1112221 11111111
Q ss_pred cccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 732 IIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 732 iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
+.. ..++ +..+||.+|++.+|..||++.+|+.
T Consensus 735 L~~-------~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 735 LEP-------LPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred ecc-------CchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 110 1112 5678999999999999999999974
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-30 Score=267.89 Aligned_cols=265 Identities=23% Similarity=0.335 Sum_probs=195.7
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeecc--cccchHHHHHHHHHHhhccCCceeeEeeeeecC--------C
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRA--NQHGGREFLAELEMLSRLHHRNLVKLFGVCIED--------N 568 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~--~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~--------~ 568 (897)
.|+...+||+|.||+||+|+.+ +|+.||+|++-.. .+.-....++|+++|..|+|+|++++++.|... .
T Consensus 18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~ 97 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRA 97 (376)
T ss_pred HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccc
Confidence 4555678999999999999965 5788999876432 223335678999999999999999999998642 3
Q ss_pred ceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCc
Q 002647 569 NRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGL 648 (897)
Q Consensus 569 ~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGL 648 (897)
.++||+++|+. +|..+|.+ ...+++..++.++..++..||.|+|... |+|||+|+.|+||+.++.+||+|||+
T Consensus 98 t~ylVf~~ceh-DLaGlLsn---~~vr~sls~Ikk~Mk~Lm~GL~~iHr~k---ilHRDmKaaNvLIt~dgilklADFGl 170 (376)
T KOG0669|consen 98 TFYLVFDFCEH-DLAGLLSN---RKVRFSLSEIKKVMKGLMNGLYYIHRNK---ILHRDMKAANVLITKDGILKLADFGL 170 (376)
T ss_pred eeeeeHHHhhh-hHHHHhcC---ccccccHHHHHHHHHHHHHHHHHHHHhh---HHhhcccHhhEEEcCCceEEeecccc
Confidence 47999999987 88888853 2356899999999999999999999887 99999999999999999999999999
Q ss_pred chhcccCCC--cccccccccccccCChhhhhc-CCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhh------
Q 002647 649 ARTALDEGN--KHISTHVMGTFGYLAPEYAMT-GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWA------ 719 (897)
Q Consensus 649 Ar~~~~~~~--~~~~t~~~GT~~Y~APE~l~~-~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~------ 719 (897)
++.+....+ ....++...|..|.+||.+.+ ..++.+.|||.-|||+.||+||.+-+..........++.-.
T Consensus 171 ar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tk 250 (376)
T KOG0669|consen 171 ARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITK 250 (376)
T ss_pred ccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCc
Confidence 986543222 233456677999999998876 57889999999999999999999888655433333332211
Q ss_pred --hhccccc------------ccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002647 720 --RPLLTTK------------EGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQAL 774 (897)
Q Consensus 720 --~~l~~~~------------e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L 774 (897)
|+-...- ++....+..++.... .....++|+..++..||.+|+++.+++..-
T Consensus 251 evWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~---kd~~a~dLle~ll~~DP~kR~~ad~alnh~ 316 (376)
T KOG0669|consen 251 EVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYV---KDDEALDLLEKLLKLDPTKRIDADQALNHD 316 (376)
T ss_pred ccCCCcccchHHHhccCCCCCcchhhhhhhhccccc---CChhHHHHHHHHhccCcccCcchHhhhchh
Confidence 1100000 000111111111100 112456788999999999999999987653
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.7e-28 Score=239.64 Aligned_cols=210 Identities=37% Similarity=0.626 Sum_probs=182.1
Q ss_pred EeecCceEEEEEEecC-CCEEEEEEeeccccc-chHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccCCcccc
Q 002647 507 IGEGGFGVVYRGILDD-GREVAVKVLKRANQH-GGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLES 584 (897)
Q Consensus 507 LG~G~fGtVyka~l~~-g~~VAVK~lk~~~~~-~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~gGSL~~ 584 (897)
||+|.+|.||++...+ ++.+++|++...... ..+.+.+|++.++.++|++++++++++......++++||+.+++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999764 899999999865432 34679999999999999999999999999889999999999999999
Q ss_pred ccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEcc-CCceEEeccCcchhcccCCCcccccc
Q 002647 585 HLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEH-DFTPKVSDFGLARTALDEGNKHISTH 663 (897)
Q Consensus 585 ~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~-~~~vKLsDFGLAr~~~~~~~~~~~t~ 663 (897)
++... ...+++..+..++.+++++|+|||+.+ ++|+||++.||+++. ++.++|+|||.+........ ....
T Consensus 81 ~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~~~---~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~ 152 (215)
T cd00180 81 LLKEN---EGKLSEDEILRILLQILEGLEYLHSNG---IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLKT 152 (215)
T ss_pred HHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhhc
Confidence 98532 146899999999999999999999987 999999999999999 89999999999875533211 1233
Q ss_pred cccccccCChhhhhcC-CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhccCCC
Q 002647 664 VMGTFGYLAPEYAMTG-HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESNIS 742 (897)
Q Consensus 664 ~~GT~~Y~APE~l~~~-~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~ 742 (897)
..+...|++||.+... ..+.+.|+|++|+++++|
T Consensus 153 ~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l--------------------------------------------- 187 (215)
T cd00180 153 IVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL--------------------------------------------- 187 (215)
T ss_pred ccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH---------------------------------------------
Confidence 5578899999998877 778999999999999999
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 743 YDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 743 ~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
..+.+++..|++.+|++||++.++++.
T Consensus 188 ----~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 ----PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred ----HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 457789999999999999999999864
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.4e-29 Score=269.83 Aligned_cols=264 Identities=22% Similarity=0.291 Sum_probs=199.6
Q ss_pred hhCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccccchHHHHHHHHHHhhccC--C----ceeeEeeeeecCCc
Q 002647 497 ATNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLAELEMLSRLHH--R----NLVKLFGVCIEDNN 569 (897)
Q Consensus 497 at~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~H--p----NIV~Llg~~~~~~~ 569 (897)
.+++|.+...+|+|.||.|-.+... .+..||||+++..... .+..+-|+++|++|.+ | -+|.+.++|.-.+.
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kY-reAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh 165 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKY-REAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH 165 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHH-hhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc
Confidence 3788999999999999999999854 4789999999865433 3456779999999942 2 36888889999999
Q ss_pred eEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEcc------------
Q 002647 570 RCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEH------------ 637 (897)
Q Consensus 570 ~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~------------ 637 (897)
.|+|+|.+ |-|++++|... ...++....+..|+.|++++++|||+.+ ++|-||||+|||+.+
T Consensus 166 iCivfell-G~S~~dFlk~N--~y~~fpi~~ir~m~~QL~~sv~fLh~~k---l~HTDLKPENILfvss~~~~~~~~k~~ 239 (415)
T KOG0671|consen 166 ICIVFELL-GLSTFDFLKEN--NYIPFPIDHIRHMGYQLLESVAFLHDLK---LTHTDLKPENILFVSSEYFKTYNPKKK 239 (415)
T ss_pred eEEEEecc-ChhHHHHhccC--CccccchHHHHHHHHHHHHHHHHHHhcc---eeecCCChheEEEeccceEEEeccCCc
Confidence 99999998 55999999643 3457888999999999999999999988 999999999999842
Q ss_pred --------CCceEEeccCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCC
Q 002647 638 --------DFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQP 709 (897)
Q Consensus 638 --------~~~vKLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~ 709 (897)
+..+||+|||.|...... ...+..|..|.|||++.+-.++..+||||+||||+||.||..-|...+.
T Consensus 240 ~~~~r~~ks~~I~vIDFGsAtf~~e~-----hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen 314 (415)
T KOG0671|consen 240 VCFIRPLKSTAIKVIDFGSATFDHEH-----HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHEN 314 (415)
T ss_pred cceeccCCCcceEEEecCCcceeccC-----cceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCc
Confidence 245899999999864221 1456789999999999999999999999999999999999998876553
Q ss_pred CCchhhHHh--------------hhhccccc----------ccccccccch----hccCCCHHHHHHHHHHHHHccCCCC
Q 002647 710 PGQENLVAW--------------ARPLLTTK----------EGLKTIIDPV----IESNISYDTLVKVAAIASMCVQPEV 761 (897)
Q Consensus 710 ~~~~~lv~w--------------~~~l~~~~----------e~l~~iiDp~----l~~~~~~e~~~~L~~Li~~CL~~dP 761 (897)
.+...+.+- .+.++..+ ...+.+.++- ..-.-...+...|.+|++.+|..||
T Consensus 315 ~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP 394 (415)
T KOG0671|consen 315 LEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDP 394 (415)
T ss_pred HHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCc
Confidence 221111100 00111000 0011111110 0011234566789999999999999
Q ss_pred CCCCCHHHHHH
Q 002647 762 SHRPFMGEVVQ 772 (897)
Q Consensus 762 ~~RPTm~EVl~ 772 (897)
.+|+|++|+++
T Consensus 395 ~~RiTl~EAL~ 405 (415)
T KOG0671|consen 395 ARRITLREALS 405 (415)
T ss_pred cccccHHHHhc
Confidence 99999999875
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.4e-30 Score=283.64 Aligned_cols=241 Identities=22% Similarity=0.328 Sum_probs=196.7
Q ss_pred CceeeeEEeecCceEEEEEEecCCC-EEEEEEeeccc---ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEe
Q 002647 500 GFHTSRIIGEGGFGVVYRGILDDGR-EVAVKVLKRAN---QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYE 575 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~~g~-~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~E 575 (897)
++..+..||-||||.|=++..+... .+|+|++++.. ..+.+....|-.+|...+.+.||+|+-.|.+.+..|+.||
T Consensus 421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmE 500 (732)
T KOG0614|consen 421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLME 500 (732)
T ss_pred hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHH
Confidence 3445578999999999999976433 48999887633 3444567889999999999999999999999999999999
Q ss_pred eccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccC
Q 002647 576 LIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655 (897)
Q Consensus 576 y~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~ 655 (897)
-|-||.|+..|+. .+.++..+...++..+++|++|||.++ ||.|||||+|+|||.+|-+||.|||+|+.+...
T Consensus 501 aClGGElWTiLrd----Rg~Fdd~tarF~~acv~EAfeYLH~k~---iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g 573 (732)
T KOG0614|consen 501 ACLGGELWTILRD----RGSFDDYTARFYVACVLEAFEYLHRKG---IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG 573 (732)
T ss_pred hhcCchhhhhhhh----cCCcccchhhhhHHHHHHHHHHHHhcC---ceeccCChhheeeccCCceEEeehhhHHHhccC
Confidence 9999999999953 467899999999999999999999998 999999999999999999999999999987543
Q ss_pred CCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccc
Q 002647 656 GNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDP 735 (897)
Q Consensus 656 ~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp 735 (897)
. .+.+++||+.|.|||++.++..+.++|.|+||+++|||++|++||...++....+++- .+++.+
T Consensus 574 ~---KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~IL---------kGid~i--- 638 (732)
T KOG0614|consen 574 R---KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLIL---------KGIDKI--- 638 (732)
T ss_pred C---ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHH---------hhhhhh---
Confidence 3 3457899999999999999999999999999999999999999998766544333321 111111
Q ss_pred hhccCCCHHHHHHHHHHHHHccCCCCCCCCC
Q 002647 736 VIESNISYDTLVKVAAIASMCVQPEVSHRPF 766 (897)
Q Consensus 736 ~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPT 766 (897)
.++........++++..+..+|.+|--
T Consensus 639 ----~~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 639 ----EFPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred ----hcccccchhHHHHHHHHHhcCcHhhhc
Confidence 122223344567888888899999864
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.9e-28 Score=256.87 Aligned_cols=248 Identities=23% Similarity=0.358 Sum_probs=196.7
Q ss_pred hCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecc---cccchHHHHHHHHHHhhc-cCCceeeEeeeeecCCceEE
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRA---NQHGGREFLAELEMLSRL-HHRNLVKLFGVCIEDNNRCL 572 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~---~~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~~~~~L 572 (897)
.++|.++++||+|+|.+|.++.++ +.+.+|+|++++. +.++.+-...|-.+..+. +||.+|.|..+|..+..+++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 468999999999999999999965 5788999999863 233344456677777665 79999999999999999999
Q ss_pred EEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhc
Q 002647 573 VYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTA 652 (897)
Q Consensus 573 V~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~ 652 (897)
|.||++||+|-=++.. ..+|+++.+..+...|..||.|||++| ||.||||.+|||||..|.+||.|||+++..
T Consensus 329 vieyv~ggdlmfhmqr----qrklpeeharfys~ei~lal~flh~rg---iiyrdlkldnvlldaeghikltdygmcke~ 401 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQR----QRKLPEEHARFYSAEICLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 401 (593)
T ss_pred EEEEecCcceeeehhh----hhcCcHHHhhhhhHHHHHHHHHHhhcC---eeeeeccccceEEccCCceeecccchhhcC
Confidence 9999999999877743 346999999999999999999999998 999999999999999999999999999865
Q ss_pred ccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCC-chhhHHhhhhcccccccccc
Q 002647 653 LDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPG-QENLVAWARPLLTTKEGLKT 731 (897)
Q Consensus 653 ~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~-~~~lv~w~~~l~~~~e~l~~ 731 (897)
...+ ..+.+++||+.|+|||++.+..|....|.|++||+++||+.|+.||+....+. .+|..++.- +-
T Consensus 402 l~~g--d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylf---------qv 470 (593)
T KOG0695|consen 402 LGPG--DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLF---------QV 470 (593)
T ss_pred CCCC--cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHH---------HH
Confidence 4433 34567899999999999999999999999999999999999999998543221 122222211 11
Q ss_pred cccchhccCCCHHHHHHHHHHHHHccCCCCCCCC
Q 002647 732 IIDPVIESNISYDTLVKVAAIASMCVQPEVSHRP 765 (897)
Q Consensus 732 iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RP 765 (897)
+++..++ ++.....+...+++.-|+.||.+|-
T Consensus 471 ilekqir--iprslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 471 ILEKQIR--IPRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred Hhhhccc--ccceeehhhHHHHHHhhcCCcHHhc
Confidence 1122221 2222334455678888999998884
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.7e-28 Score=246.12 Aligned_cols=204 Identities=29% Similarity=0.432 Sum_probs=168.4
Q ss_pred hCCceeeeEEeecCceEEEEEEe-cCCCEEEEEEeecc-cccchHHHHHHHHHHhhc-cCCceeeEeeeeecCCceEEEE
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRA-NQHGGREFLAELEMLSRL-HHRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~-~~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~~~~~LV~ 574 (897)
.+.......||+|+||.|-+-++ .+|...|||++... +.+..+..+.|+++..+. .+|.+|.++|....+...++.|
T Consensus 45 ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcM 124 (282)
T KOG0984|consen 45 ADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICM 124 (282)
T ss_pred hhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeH
Confidence 34444567899999999988885 47999999999753 333446678888887664 7999999999999999999999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
|.|.- ||+.+-...-+.++.+++...-+|+..|..||.|||++- .+||||+||+||||+.+|++|+||||.+-.+.+
T Consensus 125 E~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~d 201 (282)
T KOG0984|consen 125 ELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGYLVD 201 (282)
T ss_pred HHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccceeehh
Confidence 99965 888776655566778999999999999999999999875 599999999999999999999999999875532
Q ss_pred CCCcccccccccccccCChhhhhc----CCCCccccEEechhHHHHHHhCCCCCCCC
Q 002647 655 EGNKHISTHVMGTFGYLAPEYAMT----GHLLVKSDVYSYGVVLLELLTGRKPVDLS 707 (897)
Q Consensus 655 ~~~~~~~t~~~GT~~Y~APE~l~~----~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~ 707 (897)
. -..+...|-..|||||.+.. ..|+-|+||||||+.++||.+++.||+..
T Consensus 202 S---iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w 255 (282)
T KOG0984|consen 202 S---IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW 255 (282)
T ss_pred h---hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence 2 12233457778999998753 37889999999999999999999999743
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.6e-27 Score=239.49 Aligned_cols=199 Identities=37% Similarity=0.503 Sum_probs=172.1
Q ss_pred ceeeeEEeecCceEEEEEEecC-CCEEEEEEeeccccc-chHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeecc
Q 002647 501 FHTSRIIGEGGFGVVYRGILDD-GREVAVKVLKRANQH-GGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIH 578 (897)
Q Consensus 501 y~~~~~LG~G~fGtVyka~l~~-g~~VAVK~lk~~~~~-~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~ 578 (897)
|.+.+.||.|++|.||++...+ ++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 5567899999999999999764 899999999865544 56789999999999999999999999999899999999999
Q ss_pred CCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCc
Q 002647 579 NGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNK 658 (897)
Q Consensus 579 gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~ 658 (897)
+++|.+++.... ..+++..+..++.+++.+|.|||+.+ ++|+||+++||+++.++.++|+|||++....... .
T Consensus 81 ~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~-~ 153 (225)
T smart00221 81 GGDLFDYLRKKG---GKLSEEEARFYLRQILEALEYLHSLG---IVHRDLKPENILLGMDGLVKLADFGLARFIHRDL-A 153 (225)
T ss_pred CCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc-c
Confidence 999999986422 12889999999999999999999987 9999999999999999999999999988654332 1
Q ss_pred ccccccccccccCChhhh-hcCCCCccccEEechhHHHHHHhCCCCCCC
Q 002647 659 HISTHVMGTFGYLAPEYA-MTGHLLVKSDVYSYGVVLLELLTGRKPVDL 706 (897)
Q Consensus 659 ~~~t~~~GT~~Y~APE~l-~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~ 706 (897)
.......++..|++||.+ ....++.++|||+||++++||++|+.||+.
T Consensus 154 ~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 154 ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 122345678899999998 666778899999999999999999999964
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-28 Score=257.70 Aligned_cols=264 Identities=26% Similarity=0.351 Sum_probs=194.0
Q ss_pred eeeEEeecCceEEEEEEe-cCCCEEEEEEeecc--cccchHHHHHHHHHHhhccCCceeeEeeeeecC-----CceEEEE
Q 002647 503 TSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRA--NQHGGREFLAELEMLSRLHHRNLVKLFGVCIED-----NNRCLVY 574 (897)
Q Consensus 503 ~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~--~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~-----~~~~LV~ 574 (897)
..+-||.|+||.||.++. ++|+.||+|++-.. +-...+.+.+|+++|..++|.|++..++..... ++.|+|+
T Consensus 57 PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~T 136 (449)
T KOG0664|consen 57 PDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLT 136 (449)
T ss_pred CCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHH
Confidence 457899999999999995 48999999998642 223446789999999999999999988876543 3568889
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
|.|.. +|.+.|- .-..|+.+.+.-+++||++||.|||+.+ |.||||||.|+|++.|..+||||||+++....
T Consensus 137 ELmQS-DLHKIIV----SPQ~Ls~DHvKVFlYQILRGLKYLHsA~---ILHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 137 ELMQS-DLHKIIV----SPQALTPDHVKVFVYQILRGLKYLHTAN---ILHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HHHHh-hhhheec----cCCCCCcchhhhhHHHHHhhhHHHhhcc---hhhccCCCccEEeccCceEEecccccccccch
Confidence 99854 8888774 3457888899999999999999999988 99999999999999999999999999996543
Q ss_pred CCCcccccccccccccCChhhhhcC-CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcc------cccc
Q 002647 655 EGNKHISTHVMGTFGYLAPEYAMTG-HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLL------TTKE 727 (897)
Q Consensus 655 ~~~~~~~t~~~GT~~Y~APE~l~~~-~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~------~~~e 727 (897)
+.....+...-|.+|.|||++++. .|+.+.||||.|||+.||+..+.-|....+-.+.+++...-.-. ..-+
T Consensus 209 -d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACE 287 (449)
T KOG0664|consen 209 -RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACE 287 (449)
T ss_pred -hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhh
Confidence 333445566778999999999975 67899999999999999999888887655544444432111000 0000
Q ss_pred c-cccccc-----chhcc--CC--CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 002647 728 G-LKTIID-----PVIES--NI--SYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775 (897)
Q Consensus 728 ~-l~~iiD-----p~l~~--~~--~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~ 775 (897)
+ ...++. +.+.. .+ ..+...+...+...++..||++|.+..+.+..+.
T Consensus 288 GAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~ 345 (449)
T KOG0664|consen 288 GAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRY 345 (449)
T ss_pred hhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence 0 001111 00000 00 1122234456677788999999998888876553
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-27 Score=270.56 Aligned_cols=253 Identities=27% Similarity=0.396 Sum_probs=205.0
Q ss_pred hhCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEe
Q 002647 497 ATNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYE 575 (897)
Q Consensus 497 at~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~E 575 (897)
..++|+..+.+|.|.||.|||++.. .++..|||+++-.......-..+|+-+++..+|+|||.++|-+...+..+++||
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME 92 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME 92 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence 3567889999999999999999954 789999999998776666778899999999999999999999999999999999
Q ss_pred eccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccC
Q 002647 576 LIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655 (897)
Q Consensus 576 y~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~ 655 (897)
||.+|+|++.-+ ..++|++.++..+.+..++||+|||..+ -+|||||-.|||+++.+.+|++|||.+..+.
T Consensus 93 ycgggslQdiy~----~TgplselqiayvcRetl~gl~ylhs~g---k~hRdiKGanilltd~gDvklaDfgvsaqit-- 163 (829)
T KOG0576|consen 93 YCGGGSLQDIYH----VTGPLSELQIAYVCRETLQGLKYLHSQG---KIHRDIKGANILLTDEGDVKLADFGVSAQIT-- 163 (829)
T ss_pred ecCCCcccceee----ecccchhHHHHHHHhhhhccchhhhcCC---cccccccccceeecccCceeecccCchhhhh--
Confidence 999999999875 3678999999999999999999999888 8999999999999999999999999986542
Q ss_pred CCcccccccccccccCChhhhh---cCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccccccccc
Q 002647 656 GNKHISTHVMGTFGYLAPEYAM---TGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTI 732 (897)
Q Consensus 656 ~~~~~~t~~~GT~~Y~APE~l~---~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~i 732 (897)
........+.||++|||||+.. .+.|..++|||++|+...|+-.-+.|....-+. ..+ ++..+..
T Consensus 164 ati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpm--r~l------~LmTkS~---- 231 (829)
T KOG0576|consen 164 ATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPM--RAL------FLMTKSG---- 231 (829)
T ss_pred hhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchH--HHH------HHhhccC----
Confidence 2223345688999999999764 567899999999999999998887775322111 111 1111111
Q ss_pred ccc-hhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 733 IDP-VIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 733 iDp-~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
.++ .+++ .......+-++++.|+..+|++||+....++
T Consensus 232 ~qpp~lkD--k~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 232 FQPPTLKD--KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred CCCCcccC--CccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 111 1211 2234566788999999999999999987654
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.2e-26 Score=254.75 Aligned_cols=133 Identities=28% Similarity=0.461 Sum_probs=112.9
Q ss_pred hCCceeeeEEeecCceEEEEEEe-cCCCEEEEEEeecccccchHHHHHHHHHHhhcc-----C---CceeeEeeeeec--
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRANQHGGREFLAELEMLSRLH-----H---RNLVKLFGVCIE-- 566 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l-~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~-----H---pNIV~Llg~~~~-- 566 (897)
..+|.+.++||.|.|++||++.. .+.+-||+|+.+... ...+..+.||++|++++ | ..||+|+++|..
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 37899999999999999999984 467889999998653 33466789999999984 2 469999999974
Q ss_pred --CCceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEc
Q 002647 567 --DNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLE 636 (897)
Q Consensus 567 --~~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd 636 (897)
+.+.|+|+|++ |.+|..+|.... ...++...+.+|++||+.||.|||.++ +|||-||||+||||.
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s~--YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYSN--YRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLC 222 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHhC--CCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeee
Confidence 45789999999 668988886432 356889999999999999999999987 699999999999994
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-26 Score=260.52 Aligned_cols=196 Identities=24% Similarity=0.362 Sum_probs=168.2
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccccc---ch-----HHHHHHHHHHhhcc---CCceeeEeeeeec
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQH---GG-----REFLAELEMLSRLH---HRNLVKLFGVCIE 566 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~---~~-----~~f~~Ev~iL~~L~---HpNIV~Llg~~~~ 566 (897)
.+|...+.||.|+||.|+.|+++ +..+|+||.+.+.+-- +. -..--|+.+|..|+ |+||++++++|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 46889999999999999999976 5678999998754311 11 12446999999997 9999999999999
Q ss_pred CCceEEEEeecc-CCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEec
Q 002647 567 DNNRCLVYELIH-NGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSD 645 (897)
Q Consensus 567 ~~~~~LV~Ey~~-gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsD 645 (897)
++.+||+||-.. +-+|+++|. ....+++.+..-|+.||+.|+++||+.+ |||||||-+||.+|.+|-+||+|
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE----~kp~m~E~eAk~IFkQV~agi~hlh~~~---ivhrdikdenvivd~~g~~klid 713 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIE----FKPRMDEPEAKLIFKQVVAGIKHLHDQG---IVHRDIKDENVIVDSNGFVKLID 713 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhh----ccCccchHHHHHHHHHHHhccccccccC---ceecccccccEEEecCCeEEEee
Confidence 999999999875 458999984 3567999999999999999999999998 99999999999999999999999
Q ss_pred cCcchhcccCCCcccccccccccccCChhhhhcCCCC-ccccEEechhHHHHHHhCCCCCC
Q 002647 646 FGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLL-VKSDVYSYGVVLLELLTGRKPVD 705 (897)
Q Consensus 646 FGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t-~kSDVwSfGvIL~ELlTGk~Pfd 705 (897)
||.+..... .....+.||..|.|||++.+.+|- ..-|||++|++||-++....||.
T Consensus 714 fgsaa~~ks----gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 714 FGSAAYTKS----GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred ccchhhhcC----CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 999876433 334568899999999999998884 56799999999999999888874
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-26 Score=237.86 Aligned_cols=259 Identities=19% Similarity=0.333 Sum_probs=193.8
Q ss_pred hCCceeeeEEeecCceEEEEEE-ecCCCEEEEEEeecccccchHHHHHHHHHHhhcc-CCceeeEeeeeecC--CceEEE
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLH-HRNLVKLFGVCIED--NNRCLV 573 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~-l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~-HpNIV~Llg~~~~~--~~~~LV 573 (897)
.++|++.+++|+|-|++||.|. ..+++.++||+++.... +.+.+|+++|..|+ |+||++|+++..+. ....||
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkk---kKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi 113 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKK---KKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI 113 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHH---HHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence 4678899999999999999999 55788999999986543 67899999999997 99999999998765 456899
Q ss_pred EeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEcc-CCceEEeccCcchhc
Q 002647 574 YELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEH-DFTPKVSDFGLARTA 652 (897)
Q Consensus 574 ~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~-~~~vKLsDFGLAr~~ 652 (897)
+||+.+.+...+. ..|+.-++..++.++++||.|+|+.| |+|||+||.|++||. ...++|+|+|||...
T Consensus 114 FE~v~n~Dfk~ly-------~tl~d~dIryY~~elLkALdyCHS~G---ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFY 183 (338)
T KOG0668|consen 114 FEYVNNTDFKQLY-------PTLTDYDIRYYIYELLKALDYCHSMG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 183 (338)
T ss_pred hhhhccccHHHHh-------hhhchhhHHHHHHHHHHHHhHHHhcC---cccccCCcceeeechhhceeeeeecchHhhc
Confidence 9999987665443 35788889999999999999999998 999999999999995 457999999999987
Q ss_pred ccCCCcccccccccccccCChhhhhcCC-CCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccc-----
Q 002647 653 LDEGNKHISTHVMGTFGYLAPEYAMTGH-LLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTK----- 726 (897)
Q Consensus 653 ~~~~~~~~~t~~~GT~~Y~APE~l~~~~-~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~----- 726 (897)
.......+ ...+..|--||.+...+ |+..-|+|||||+|.+|+..+.||-... +....++..+..+-..+
T Consensus 184 Hp~~eYnV---RVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~-dN~DQLVkIakVLGt~el~~Yl 259 (338)
T KOG0668|consen 184 HPGKEYNV---RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH-DNYDQLVKIAKVLGTDELYAYL 259 (338)
T ss_pred CCCceeee---eeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCC-CCHHHHHHHHHHhChHHHHHHH
Confidence 65443322 24566788999987654 5667799999999999999999995432 22334443332221110
Q ss_pred ccccccccchhcc--------C----C---CHH-HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 727 EGLKTIIDPVIES--------N----I---SYD-TLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 727 e~l~~iiDp~l~~--------~----~---~~e-~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
....--+|+.... . + ... ...+.++++...|..|-.+|+|++|....
T Consensus 260 ~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 260 NKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 0000012222111 0 0 011 12567788999999999999999998653
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.3e-26 Score=237.01 Aligned_cols=260 Identities=20% Similarity=0.326 Sum_probs=191.3
Q ss_pred hhCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccccchHHHHHHHHHHhhc-cCCceeeEeee-eecCCceEEE
Q 002647 497 ATNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLAELEMLSRL-HHRNLVKLFGV-CIEDNNRCLV 573 (897)
Q Consensus 497 at~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~-~~~~~~~~LV 573 (897)
..+.|.+.+.||+|.||.+-++.++ ..+.+++|.+... ....++|.+|...--.| .|.||+.-+++ |+..+.++++
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~ 100 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV 100 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence 3467889999999999999999976 5678999988653 23457899998776666 58999988776 5556677899
Q ss_pred EeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEc--cCCceEEeccCcchh
Q 002647 574 YELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLE--HDFTPKVSDFGLART 651 (897)
Q Consensus 574 ~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd--~~~~vKLsDFGLAr~ 651 (897)
+||++.|+|..-+.. ..+.+....+++.|+++||.|||+.+ +||||||.+||||- +..++||||||+.+.
T Consensus 101 qE~aP~gdL~snv~~-----~GigE~~~K~v~~ql~SAi~fMHskn---lVHRdlK~eNiLif~~df~rvKlcDFG~t~k 172 (378)
T KOG1345|consen 101 QEFAPRGDLRSNVEA-----AGIGEANTKKVFAQLLSAIEFMHSKN---LVHRDLKAENILIFDADFYRVKLCDFGLTRK 172 (378)
T ss_pred eccCccchhhhhcCc-----ccccHHHHHHHHHHHHHHHHHhhccc---hhhcccccceEEEecCCccEEEeeecccccc
Confidence 999999999988742 35888889999999999999999988 99999999999993 345899999999875
Q ss_pred cccCCCcccccccccccccCChhhhhc---C--CCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccc
Q 002647 652 ALDEGNKHISTHVMGTFGYLAPEYAMT---G--HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTK 726 (897)
Q Consensus 652 ~~~~~~~~~~t~~~GT~~Y~APE~l~~---~--~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~ 726 (897)
... ......-+..|.+||.... + ...+.+|||.||+|++.++||+.||+ ........++.|.+......
T Consensus 173 ~g~-----tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQ-ka~~~d~~Y~~~~~w~~rk~ 246 (378)
T KOG1345|consen 173 VGT-----TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQ-KASIMDKPYWEWEQWLKRKN 246 (378)
T ss_pred cCc-----eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcch-hhhccCchHHHHHHHhcccC
Confidence 321 1122334567999997653 2 23567899999999999999999997 33333444555543322111
Q ss_pred ccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHhh
Q 002647 727 EGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNE 780 (897)
Q Consensus 727 e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~~e 780 (897)
-.+...+ ..++ .++..+.++-+..++++|-.+.++.++.+.+..+
T Consensus 247 ~~~P~~F-----~~fs----~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E 291 (378)
T KOG1345|consen 247 PALPKKF-----NPFS----EKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKE 291 (378)
T ss_pred ccCchhh-----cccC----HHHHHHHHHhcCCcccccchhHHHHHHHHHHHHH
Confidence 1111111 1122 3456677788899999998888887776655433
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.4e-25 Score=248.46 Aligned_cols=266 Identities=23% Similarity=0.266 Sum_probs=199.1
Q ss_pred hhCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccccchHHHHHHHHHHhhcc------CCceeeEeeeeecCCc
Q 002647 497 ATNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQHGGREFLAELEMLSRLH------HRNLVKLFGVCIEDNN 569 (897)
Q Consensus 497 at~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~------HpNIV~Llg~~~~~~~ 569 (897)
...+|.+....|+|-|++|.+|... -|..||||+|.....- -+.=++|+++|++|+ --++++|+-.|...++
T Consensus 430 LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M-~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknH 508 (752)
T KOG0670|consen 430 LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM-HKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNH 508 (752)
T ss_pred hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH-hhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcce
Confidence 4678999999999999999999954 5789999999865322 234468999999995 3579999999999999
Q ss_pred eEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccC-CceEEeccCc
Q 002647 570 RCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHD-FTPKVSDFGL 648 (897)
Q Consensus 570 ~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~-~~vKLsDFGL 648 (897)
+|||+|-+. .+|.+.|.... .+..|....+..++.|+.-||..|-..+ |+|.||||.|||+++. ..+||||||.
T Consensus 509 LClVFE~Ls-lNLRevLKKyG-~nvGL~ikaVRsYaqQLflALklLK~c~---vlHaDIKPDNiLVNE~k~iLKLCDfGS 583 (752)
T KOG0670|consen 509 LCLVFEPLS-LNLREVLKKYG-RNVGLHIKAVRSYAQQLFLALKLLKKCG---VLHADIKPDNILVNESKNILKLCDFGS 583 (752)
T ss_pred eEEEehhhh-chHHHHHHHhC-cccceeehHHHHHHHHHHHHHHHHHhcC---eeecccCccceEeccCcceeeeccCcc
Confidence 999999884 58999997643 3456888999999999999999999887 9999999999999865 5689999999
Q ss_pred chhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhH------------
Q 002647 649 ARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLV------------ 716 (897)
Q Consensus 649 Ar~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv------------ 716 (897)
|-...+..- +.+..+..|.|||++.+-.|+...|+||.||.||||.||+.-|.+........+.
T Consensus 584 A~~~~enei----tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~Kml 659 (752)
T KOG0670|consen 584 ASFASENEI----TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKML 659 (752)
T ss_pred ccccccccc----cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHh
Confidence 876543221 2233455799999999999999999999999999999999988765433211111
Q ss_pred ---Hhhh--------hccccccc------c--cccccc------hhcc--CCC---HHHHHHHHHHHHHccCCCCCCCCC
Q 002647 717 ---AWAR--------PLLTTKEG------L--KTIIDP------VIES--NIS---YDTLVKVAAIASMCVQPEVSHRPF 766 (897)
Q Consensus 717 ---~w~~--------~l~~~~e~------l--~~iiDp------~l~~--~~~---~e~~~~L~~Li~~CL~~dP~~RPT 766 (897)
.+.. .+....+. . -..+.| .+.. .++ ...+..|.+|+..|+..||++|-+
T Consensus 660 RKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit 739 (752)
T KOG0670|consen 660 RKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRIT 739 (752)
T ss_pred hhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCC
Confidence 0000 00000000 0 011111 1111 122 234567888999999999999999
Q ss_pred HHHHHH
Q 002647 767 MGEVVQ 772 (897)
Q Consensus 767 m~EVl~ 772 (897)
..+.++
T Consensus 740 ~nqAL~ 745 (752)
T KOG0670|consen 740 VNQALK 745 (752)
T ss_pred HHHHhc
Confidence 998765
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-25 Score=275.19 Aligned_cols=197 Identities=21% Similarity=0.257 Sum_probs=140.4
Q ss_pred hccC-CceeeEeeee-------ecCCceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCc
Q 002647 551 RLHH-RNLVKLFGVC-------IEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPR 622 (897)
Q Consensus 551 ~L~H-pNIV~Llg~~-------~~~~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~ 622 (897)
.++| .||++++++| .+....++++||+ +++|.++|.. ....+++.+++.|+.||++||+|||+.+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~g--- 100 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN---PDRSVDAFECFHVFRQIVEIVNAAHSQG--- 100 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc---ccccccHHHHHHHHHHHHHHHHHHHhCC---
Confidence 4556 6888888887 2334567888987 5699999963 2356999999999999999999999988
Q ss_pred EEecCCCCCcEEEcc-------------------CCceEEeccCcchhcccCCC--------------cccccccccccc
Q 002647 623 VIHRDFKSSNILLEH-------------------DFTPKVSDFGLARTALDEGN--------------KHISTHVMGTFG 669 (897)
Q Consensus 623 IIHrDIKpsNILLd~-------------------~~~vKLsDFGLAr~~~~~~~--------------~~~~t~~~GT~~ 669 (897)
|+||||||+||||+. ++.+||+|||+++....... ........||+.
T Consensus 101 IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 180 (793)
T PLN00181 101 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSW 180 (793)
T ss_pred eeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcc
Confidence 999999999999954 45566677777653211000 000112458899
Q ss_pred cCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhccCCCHHHHHHH
Q 002647 670 YLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKV 749 (897)
Q Consensus 670 Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L 749 (897)
|||||++.+..++.++|||||||+||||++|..|+.... ..+..+.. ..+.+.. .....+.
T Consensus 181 Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~----~~~~~~~~----------~~~~~~~-----~~~~~~~ 241 (793)
T PLN00181 181 YTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS----RTMSSLRH----------RVLPPQI-----LLNWPKE 241 (793)
T ss_pred eEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH----HHHHHHHH----------hhcChhh-----hhcCHHH
Confidence 999999999999999999999999999999988864211 00101100 0111111 1112345
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHH
Q 002647 750 AAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 750 ~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
..++.+||+.+|.+||+|.||++.
T Consensus 242 ~~~~~~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 242 ASFCLWLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred HHHHHHhCCCChhhCcChHHHhhc
Confidence 678889999999999999999864
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.2e-25 Score=236.15 Aligned_cols=256 Identities=25% Similarity=0.341 Sum_probs=190.8
Q ss_pred CCceeeeEEeecCceEEEEEEec-CCCEEEEEEeec--ccccchHHHHHHHHHHhhccCCceeeEeeeeecC------Cc
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKR--ANQHGGREFLAELEMLSRLHHRNLVKLFGVCIED------NN 569 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~--~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~------~~ 569 (897)
.+|.-.+.+|.|.- .|..+... .++.||+|++.. ......+...+|..++..++|+||++++.+|.-. .+
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 35666677888887 55555532 588999998753 2234446778999999999999999999998643 46
Q ss_pred eEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcc
Q 002647 570 RCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLA 649 (897)
Q Consensus 570 ~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLA 649 (897)
.|+|||||.. +|...++ -.++-+.+..|+.|++.|+.|||+.+ |+||||||+||++..+..+||.|||+|
T Consensus 96 ~y~v~e~m~~-nl~~vi~------~elDH~tis~i~yq~~~~ik~lhs~~---IihRdLkPsnivv~~~~~lKi~dfg~a 165 (369)
T KOG0665|consen 96 VYLVMELMDA-NLCQVIL------MELDHETISYILYQMLCGIKHLHSAG---IIHRDLKPSNIVVNSDCTLKILDFGLA 165 (369)
T ss_pred HHHHHHhhhh-HHHHHHH------HhcchHHHHHHHHHHHHHHHHHHhcc---eeecccCcccceecchhheeeccchhh
Confidence 7999999964 8888875 24778899999999999999999988 999999999999999999999999999
Q ss_pred hhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcc------
Q 002647 650 RTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLL------ 723 (897)
Q Consensus 650 r~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~------ 723 (897)
+.... .-..+....|..|.|||++.+-.+.+.+||||.||++.||++|+.-|.+.+. +-+|.+...
T Consensus 166 r~e~~---~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~-----idQ~~ki~~~lgtpd 237 (369)
T KOG0665|consen 166 RTEDT---DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDH-----IDQWNKIIEQLGTPD 237 (369)
T ss_pred cccCc---ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchH-----HHHHHHHHHHhcCCC
Confidence 86422 2355677889999999999988899999999999999999999998864332 222221110
Q ss_pred ---------------ccccc-----ccccc-cchhcc--CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 724 ---------------TTKEG-----LKTII-DPVIES--NISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 724 ---------------~~~e~-----l~~ii-Dp~l~~--~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
...+. ..+++ |..... +.+.-......+++.+||-.||++|-+.+++++.
T Consensus 238 ~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 238 PSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred HHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 00000 00000 100000 0111122346789999999999999999999764
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.6e-24 Score=234.51 Aligned_cols=201 Identities=30% Similarity=0.405 Sum_probs=166.9
Q ss_pred HHHhhCCceeeeEEeecCceEEEEEEec----CCCEEEEEEeecccccchHHHHHHHHHHhhc-cCCceeeEeeeeecCC
Q 002647 494 IEKATNGFHTSRIIGEGGFGVVYRGILD----DGREVAVKVLKRANQHGGREFLAELEMLSRL-HHRNLVKLFGVCIEDN 568 (897)
Q Consensus 494 i~~at~~y~~~~~LG~G~fGtVyka~l~----~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~~ 568 (897)
+....+.|..+++||+|.|++||++++. ..+.||+|.+..... ...+..|+++|..+ -+.||+++.+++...+
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd 108 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGCFRNND 108 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence 3445677899999999999999999954 367899999976543 35688999999999 5999999999999999
Q ss_pred ceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEc-cCCceEEeccC
Q 002647 569 NRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLE-HDFTPKVSDFG 647 (897)
Q Consensus 569 ~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd-~~~~vKLsDFG 647 (897)
..++|+||++...-.+++. .++..++..++..+++||.++|..| ||||||||+|+|.+ ..+.-.|.|||
T Consensus 109 ~v~ivlp~~~H~~f~~l~~-------~l~~~~i~~Yl~~ll~Al~~~h~~G---IvHRDiKpsNFL~n~~t~rg~LvDFg 178 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLYR-------SLSLAEIRWYLRNLLKALAHLHKNG---IVHRDIKPSNFLYNRRTQRGVLVDFG 178 (418)
T ss_pred eeEEEecccCccCHHHHHh-------cCCHHHHHHHHHHHHHHhhhhhccC---ccccCCCccccccccccCCceEEech
Confidence 9999999999988877773 3778899999999999999999998 99999999999997 45678999999
Q ss_pred cchhcccCC------------------------------------------CcccccccccccccCChhhhhcC-CCCcc
Q 002647 648 LARTALDEG------------------------------------------NKHISTHVMGTFGYLAPEYAMTG-HLLVK 684 (897)
Q Consensus 648 LAr~~~~~~------------------------------------------~~~~~t~~~GT~~Y~APE~l~~~-~~t~k 684 (897)
||....... ........+||++|.|||++... ..+.+
T Consensus 179 LA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qtta 258 (418)
T KOG1167|consen 179 LAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTA 258 (418)
T ss_pred hHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCc
Confidence 997210000 00111235799999999998764 55889
Q ss_pred ccEEechhHHHHHHhCCCCCCC
Q 002647 685 SDVYSYGVVLLELLTGRKPVDL 706 (897)
Q Consensus 685 SDVwSfGvIL~ELlTGk~Pfd~ 706 (897)
+||||.|||++.+++++.||-.
T Consensus 259 iDiws~GVI~Lslls~~~PFf~ 280 (418)
T KOG1167|consen 259 IDIWSAGVILLSLLSRRYPFFK 280 (418)
T ss_pred cceeeccceeehhhcccccccc
Confidence 9999999999999999999854
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.5e-24 Score=213.98 Aligned_cols=169 Identities=22% Similarity=0.194 Sum_probs=125.9
Q ss_pred CccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcc
Q 002647 580 GSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH 659 (897)
Q Consensus 580 GSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~ 659 (897)
|+|.++++. ....+++.+++.|+.||++||+|||+.+ ||+|||++.++.+|+ ||+++.....
T Consensus 1 GsL~~~l~~---~~~~l~~~~~~~i~~qi~~~L~~lH~~~---------kp~Nil~~~~~~~~~--fG~~~~~~~~---- 62 (176)
T smart00750 1 VSLADILEV---RGRPLNEEEIWAVCLQCLRALRELHRQA---------KSGNILLTWDGLLKL--DGSVAFKTPE---- 62 (176)
T ss_pred CcHHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHHhcC---------CcccEeEcCccceee--ccceEeeccc----
Confidence 688999853 2346999999999999999999999875 999999999999999 9998764321
Q ss_pred cccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhcc
Q 002647 660 ISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIES 739 (897)
Q Consensus 660 ~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~ 739 (897)
...||+.|||||++.+..++.++|||||||++|||+||+.||....... ..+..+...... . ++...
T Consensus 63 ---~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~-~~~~~~~~~~~~-------~-~~~~~- 129 (176)
T smart00750 63 ---QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELS-AILEILLNGMPA-------D-DPRDR- 129 (176)
T ss_pred ---cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhc-HHHHHHHHHhcc-------C-Ccccc-
Confidence 1258899999999999999999999999999999999999996432211 111111111100 0 00000
Q ss_pred CCCHHHH--HHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHh
Q 002647 740 NISYDTL--VKVAAIASMCVQPEVSHRPFMGEVVQALKLVCN 779 (897)
Q Consensus 740 ~~~~e~~--~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~~ 779 (897)
....... ..+.+++.+||+.+|++||++.|+++.+..+..
T Consensus 130 ~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 130 SNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred ccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHH
Confidence 0011111 258999999999999999999999998876643
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.4e-22 Score=206.74 Aligned_cols=261 Identities=30% Similarity=0.437 Sum_probs=197.4
Q ss_pred ceeeeEEeecCceEEEEEEecCCCEEEEEEeeccccc---chHHHHHHHHHHhhccCC-ceeeEeeeeecCCceEEEEee
Q 002647 501 FHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQH---GGREFLAELEMLSRLHHR-NLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 501 y~~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~---~~~~f~~Ev~iL~~L~Hp-NIV~Llg~~~~~~~~~LV~Ey 576 (897)
|.+.+.||.|+||.||++... ..+++|.+...... ....|.+|+.++..+.|+ +++++.+++......+++++|
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 677889999999999999987 78999998764433 367899999999999988 799999999776667999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCC-ceEEeccCcchhcccC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDF-TPKVSDFGLARTALDE 655 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~-~vKLsDFGLAr~~~~~ 655 (897)
+.+++|.+++...... ..+.......++.|++.++.|+|..+ ++||||||+||+++.++ .++++|||+++.....
T Consensus 80 ~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~H~~~---~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~ 155 (384)
T COG0515 80 VDGGSLEDLLKKIGRK-GPLSESEALFILAQILSALEYLHSKG---IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDP 155 (384)
T ss_pred CCCCcHHHHHHhcccc-cCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeecCCCCeEEEeccCcceecCCC
Confidence 9999999776432111 36889999999999999999999998 99999999999999988 7999999999854333
Q ss_pred CCcc----cccccccccccCChhhhhc---CCCCccccEEechhHHHHHHhCCCCCCCCCCC-CchhhHHhhhhcccccc
Q 002647 656 GNKH----ISTHVMGTFGYLAPEYAMT---GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPP-GQENLVAWARPLLTTKE 727 (897)
Q Consensus 656 ~~~~----~~t~~~GT~~Y~APE~l~~---~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~-~~~~lv~w~~~l~~~~e 727 (897)
.... ......|+..|+|||.+.. .......|+|++|++++++++|..||...... ..............
T Consensus 156 ~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~--- 232 (384)
T COG0515 156 GSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPT--- 232 (384)
T ss_pred CccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCC---
Confidence 2211 3456789999999999987 57888999999999999999999997644321 01111111111000
Q ss_pred cccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 728 GLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 728 ~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
. .................+.+++..|+..+|..|.++.+....
T Consensus 233 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 233 P---SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred c---ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 0 000000000002223567789999999999999999987765
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-22 Score=227.49 Aligned_cols=176 Identities=21% Similarity=0.225 Sum_probs=134.8
Q ss_pred HHhhCCceeeeEEeecCceEEEEEEec--CCCEEEEEEeecc-----cccchHHHHHHHHHHhhccCCceee-Eeeeeec
Q 002647 495 EKATNGFHTSRIIGEGGFGVVYRGILD--DGREVAVKVLKRA-----NQHGGREFLAELEMLSRLHHRNLVK-LFGVCIE 566 (897)
Q Consensus 495 ~~at~~y~~~~~LG~G~fGtVyka~l~--~g~~VAVK~lk~~-----~~~~~~~f~~Ev~iL~~L~HpNIV~-Llg~~~~ 566 (897)
....++|.+.+.||+|+||+||+|... +++.||||++... .....+.|.+|+++|++|+|+|++. ++++
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--- 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--- 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence 345678999999999999999999864 5777899987532 1122456899999999999999985 4432
Q ss_pred CCceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCC-CCCcEEEccCCceEEec
Q 002647 567 DNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDF-KSSNILLEHDFTPKVSD 645 (897)
Q Consensus 567 ~~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDI-KpsNILLd~~~~vKLsD 645 (897)
+..+|||||+++++|.. +. . .. ...++.+++++|.|||+.+ |+|||| ||+|||++.++.+||+|
T Consensus 91 -~~~~LVmE~~~G~~L~~-~~---~-~~------~~~~~~~i~~aL~~lH~~g---IiHrDL~KP~NILv~~~~~ikLiD 155 (365)
T PRK09188 91 -GKDGLVRGWTEGVPLHL-AR---P-HG------DPAWFRSAHRALRDLHRAG---ITHNDLAKPQNWLMGPDGEAAVID 155 (365)
T ss_pred -CCcEEEEEccCCCCHHH-hC---c-cc------hHHHHHHHHHHHHHHHHCC---CeeCCCCCcceEEEcCCCCEEEEE
Confidence 45799999999999963 21 1 11 1467889999999999988 999999 99999999999999999
Q ss_pred cCcchhcccCCCc------ccccccccccccCChhhhhcCCC------CccccEE
Q 002647 646 FGLARTALDEGNK------HISTHVMGTFGYLAPEYAMTGHL------LVKSDVY 688 (897)
Q Consensus 646 FGLAr~~~~~~~~------~~~t~~~GT~~Y~APE~l~~~~~------t~kSDVw 688 (897)
||+++........ ...+...+++.|+|||++...+. +..+|-|
T Consensus 156 FGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 156 FQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred CccceecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 9999865443211 11246778999999999875422 2336766
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-21 Score=216.81 Aligned_cols=261 Identities=24% Similarity=0.297 Sum_probs=194.8
Q ss_pred CceeeeEEeecCceEEEEEEecCC--CEEEEEEeecccccchHHHHHHHHHHhhccC----CceeeEeeee-ecCCceEE
Q 002647 500 GFHTSRIIGEGGFGVVYRGILDDG--REVAVKVLKRANQHGGREFLAELEMLSRLHH----RNLVKLFGVC-IEDNNRCL 572 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~~g--~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~H----pNIV~Llg~~-~~~~~~~L 572 (897)
+|.+.++||+|+||.||++..... ..+|+|............+..|+.+|..+.. .++..+++.. ..+...++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 799999999999999999996643 4788888766543333378889999999873 5788888888 46677899
Q ss_pred EEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccC-----CceEEeccC
Q 002647 573 VYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHD-----FTPKVSDFG 647 (897)
Q Consensus 573 V~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~-----~~vKLsDFG 647 (897)
||+.+ |-+|.++..... ...++..+.++|+.|++.+|++||+.| ++||||||.|+++... ..+.|.|||
T Consensus 99 VM~l~-G~sL~dl~~~~~--~~~fs~~T~l~ia~q~l~~l~~lH~~G---~iHRDiKp~N~~~g~~~~~~~~~~~llDfG 172 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNP--PGRFSRKTVLRIAIQNLNALEDLHSKG---FIHRDIKPENFVVGQSSRSEVRTLYLLDFG 172 (322)
T ss_pred EEecc-CccHHHHHHhCC--CCCcCHhHHHHHHHHHHHHHHHHHhcC---cccCCcCHHHeeecCCCCcccceEEEEecC
Confidence 99987 779999775332 467999999999999999999999998 9999999999999754 469999999
Q ss_pred cch--hcccCCCc---cc---ccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchh-hHHh
Q 002647 648 LAR--TALDEGNK---HI---STHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQEN-LVAW 718 (897)
Q Consensus 648 LAr--~~~~~~~~---~~---~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~-lv~w 718 (897)
+++ ........ .. .....||..|++++...+...+.+.|+||++.++.||+.|..||.......... +...
T Consensus 173 lar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~ 252 (322)
T KOG1164|consen 173 LARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKD 252 (322)
T ss_pred CCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHH
Confidence 998 43222211 11 234569999999999999999999999999999999999999985433221111 1111
Q ss_pred hhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHhh
Q 002647 719 ARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNE 780 (897)
Q Consensus 719 ~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~~e 780 (897)
.. ...... ........+..+...+-..+..++|....+...|+....+
T Consensus 253 ~~---------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 253 PR---------KLLTDR-----FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred hh---------hhcccc-----ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence 00 000000 1111223455566666668999999999999888766544
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.7e-23 Score=214.05 Aligned_cols=249 Identities=22% Similarity=0.366 Sum_probs=192.1
Q ss_pred eeeEEeecCceEEEEEEecCCCEEEEEEeec--ccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccCC
Q 002647 503 TSRIIGEGGFGVVYRGILDDGREVAVKVLKR--ANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNG 580 (897)
Q Consensus 503 ~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~--~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~gG 580 (897)
...+|.+...|+.|+|+++ |..+++|+++. ......++|..|.-.|+.+.||||+.++|.|....+..+|..||+.|
T Consensus 194 l~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~g 272 (448)
T KOG0195|consen 194 LITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFG 272 (448)
T ss_pred hhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccch
Confidence 3457889999999999998 66777888764 23334578999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCccc
Q 002647 581 SLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHI 660 (897)
Q Consensus 581 SL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~~ 660 (897)
+|+..||+.. .-.++..++.+++.++|+|++|||+.. +-|.---|.+..++||++.+++|+= +-++.....
T Consensus 273 slynvlhe~t--~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltarism-ad~kfsfqe----- 343 (448)
T KOG0195|consen 273 SLYNVLHEQT--SVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISM-ADTKFSFQE----- 343 (448)
T ss_pred HHHHHHhcCc--cEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheec-ccceeeeec-----
Confidence 9999998643 446788999999999999999999885 3344456999999999999988741 111211111
Q ss_pred ccccccccccCChhhhhcCCCC---ccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchh
Q 002647 661 STHVMGTFGYLAPEYAMTGHLL---VKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVI 737 (897)
Q Consensus 661 ~t~~~GT~~Y~APE~l~~~~~t---~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l 737 (897)
....-.+.||+||.++..+.+ +++|+|||.++||||.|...||....+.+....+ .-++++.
T Consensus 344 -~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmki--------aleglrv------ 408 (448)
T KOG0195|consen 344 -VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKI--------ALEGLRV------ 408 (448)
T ss_pred -cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhh--------hhccccc------
Confidence 112335789999999876553 5789999999999999999999765543322211 1233332
Q ss_pred ccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 002647 738 ESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVC 778 (897)
Q Consensus 738 ~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~ 778 (897)
.++......+.+++.-|++.||.+||.+..|+-.|+++.
T Consensus 409 --~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 409 --HIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred --cCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 334444456788999999999999999999999998753
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.6e-21 Score=231.12 Aligned_cols=249 Identities=26% Similarity=0.276 Sum_probs=185.7
Q ss_pred CceeeeEEeecCceEEEEEEecCCCEEEEEEeec-ccccchHHHHHHHHHH--hhccCCceeeEeeeeecCCceEEEEee
Q 002647 500 GFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKR-ANQHGGREFLAELEML--SRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~-~~~~~~~~f~~Ev~iL--~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
+|...+.||.+.|=+|.+|+.++|. |+||++-+ ......+.|.++++-+ ..+++||.+++.-+-..+...|||-+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence 5777899999999999999998887 88998754 3355556666555444 445899999999887777888999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchh-cccC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLART-ALDE 655 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~-~~~~ 655 (897)
..+ +|+|.|. .+.-|...+.+.|+.|++.||..+|+.+ |+|||||.+||||+.-+-+.|+||...+- +.++
T Consensus 103 vkh-nLyDRlS----TRPFL~~iEKkWiaFQLL~al~qcH~~g---VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPe 174 (1431)
T KOG1240|consen 103 VKH-NLYDRLS----TRPFLVLIEKKWIAFQLLKALSQCHKLG---VCHGDIKSENILITSWNWLYLTDFASFKPTYLPE 174 (1431)
T ss_pred Hhh-hhhhhhc----cchHHHHHHHHHHHHHHHHHHHHHHHcC---ccccccccceEEEeeechhhhhcccccCCccCCC
Confidence 976 9999983 3456888899999999999999999998 99999999999999999999999976652 2223
Q ss_pred CCccccccccc----ccccCChhhhhcC-----------CCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhh
Q 002647 656 GNKHISTHVMG----TFGYLAPEYAMTG-----------HLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWA 719 (897)
Q Consensus 656 ~~~~~~t~~~G----T~~Y~APE~l~~~-----------~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~ 719 (897)
++....+.+.. -.+|+|||.+... .++++.||||+||++.||++ |+++|+.. .+..+-
T Consensus 175 DNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS------QL~aYr 248 (1431)
T KOG1240|consen 175 DNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS------QLLAYR 248 (1431)
T ss_pred CCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH------HHHhHh
Confidence 33322333322 3479999987541 26789999999999999998 78888642 222221
Q ss_pred hhc-ccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 002647 720 RPL-LTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775 (897)
Q Consensus 720 ~~l-~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~ 775 (897)
+.- ...+..++.|-| ..+..++..|++.||++|-++.++++.-+
T Consensus 249 ~~~~~~~e~~Le~Ied------------~~~Rnlil~Mi~rdPs~RlSAedyL~~yr 293 (1431)
T KOG1240|consen 249 SGNADDPEQLLEKIED------------VSLRNLILSMIQRDPSKRLSAEDYLQKYR 293 (1431)
T ss_pred ccCccCHHHHHHhCcC------------ccHHHHHHHHHccCchhccCHHHHHHhhh
Confidence 110 000011111111 24678999999999999999999988743
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.2e-21 Score=230.78 Aligned_cols=253 Identities=22% Similarity=0.270 Sum_probs=186.5
Q ss_pred eeeEEeecCceEEEEEEec-CCCEEEEEEee----cc-cccc-hHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEe
Q 002647 503 TSRIIGEGGFGVVYRGILD-DGREVAVKVLK----RA-NQHG-GREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYE 575 (897)
Q Consensus 503 ~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk----~~-~~~~-~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~E 575 (897)
..+++|.|++|.|+..... .....+.|... .. .+.. ...+..|+.+-..|+|+|++..+..+.+.....-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 4578999999988877733 33434444332 11 1111 1125567778888999999988888877766666699
Q ss_pred eccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccC
Q 002647 576 LIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDE 655 (897)
Q Consensus 576 y~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~ 655 (897)
||++ +|..++.. ...++..++-.++.|++.|++|||..| |.|||||++|++++.++.+||+|||.+......
T Consensus 402 ~~~~-Dlf~~~~~----~~~~~~~e~~c~fKqL~~Gv~y~h~~G---iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~ 473 (601)
T KOG0590|consen 402 YCPY-DLFSLVMS----NGKLTPLEADCFFKQLLRGVKYLHSMG---LAHRDLKLENLLVTENGILKIIDFGAASVFRYP 473 (601)
T ss_pred cccH-HHHHHHhc----ccccchhhhhHHHHHHHHHHHHHHhcC---ceeccCccccEEEecCCceEEeecCcceeeccC
Confidence 9999 99999843 346888999999999999999999998 999999999999999999999999998765544
Q ss_pred CCc--ccccccccccccCChhhhhcCCCCc-cccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccccccccc
Q 002647 656 GNK--HISTHVMGTFGYLAPEYAMTGHLLV-KSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTI 732 (897)
Q Consensus 656 ~~~--~~~t~~~GT~~Y~APE~l~~~~~t~-kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~i 732 (897)
... .......|+..|+|||++....|.. ..||||.|+++..|.+|+.||......+..... . ..... ..+
T Consensus 474 ~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~--~----~~~~~-~~~ 546 (601)
T KOG0590|consen 474 WEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKT--N----NYSDQ-RNI 546 (601)
T ss_pred cchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhh--h----ccccc-ccc
Confidence 444 5667789999999999999999975 689999999999999999998654433222100 0 00000 000
Q ss_pred ccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 733 IDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 733 iDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
.. -...+..+...+...++.++|+.||.+|-||.+|++
T Consensus 547 ~~--~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 547 FE--GPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred cc--ChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 00 001112233456678999999999999999999975
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.9e-20 Score=190.91 Aligned_cols=265 Identities=22% Similarity=0.286 Sum_probs=198.7
Q ss_pred hhCCceeeeEEeecCceEEEEEE-ecCCCEEEEEEeecccccchHHHHHHHHHHhhccC-CceeeEeeeeecCCceEEEE
Q 002647 497 ATNGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHH-RNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 497 at~~y~~~~~LG~G~fGtVyka~-l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~H-pNIV~Llg~~~~~~~~~LV~ 574 (897)
..++|.++++||.|+||.+|.|. ..+|++||||.-...... .++..|.++.+.|++ ..|..+..+..++..-.|||
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h--pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM 90 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH--PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM 90 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC--cchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence 45789999999999999999999 678999999986543322 467889999999975 56777777788888889999
Q ss_pred eeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccC---CceEEeccCcchh
Q 002647 575 ELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHD---FTPKVSDFGLART 651 (897)
Q Consensus 575 Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~---~~vKLsDFGLAr~ 651 (897)
|.+ |-||.+++.-+ ...++..+.+-++-|++.-++|+|.++ +|||||||+|+|+.-+ ..+.++||||++.
T Consensus 91 dLL-GPsLEdLfnfC---~R~ftmkTvLMLaDQml~RiEyvH~r~---fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKk 163 (341)
T KOG1163|consen 91 DLL-GPSLEDLFNFC---SRRFTMKTVLMLADQMLSRIEYVHLRN---FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKK 163 (341)
T ss_pred ecc-CccHHHHHHHH---hhhhhHHhHHHHHHHHHHHHHHHHhhc---cccccCCccceeeccccccceEEEEeccchhh
Confidence 998 66898887533 356899999999999999999999998 9999999999999643 5689999999997
Q ss_pred cccCCCc-----ccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccc
Q 002647 652 ALDEGNK-----HISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTK 726 (897)
Q Consensus 652 ~~~~~~~-----~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~ 726 (897)
..+.... .......||.+|.+=....+...+.+.|+-|+|.+|.++.-|..||++...........-. . +
T Consensus 164 y~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI---~--E 238 (341)
T KOG1163|consen 164 YRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKI---S--E 238 (341)
T ss_pred hccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHH---H--H
Confidence 6543321 2234568999999888777777788999999999999999999999764432221111000 0 0
Q ss_pred ccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHhh
Q 002647 727 EGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNE 780 (897)
Q Consensus 727 e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~~e 780 (897)
..+...+ ..+-..+ ..++...+.-|-..--++-|...-+-+.++.+...
T Consensus 239 kK~s~~i-e~LC~G~----P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ 287 (341)
T KOG1163|consen 239 KKMSTPI-EVLCKGF----PAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRT 287 (341)
T ss_pred hhcCCCH-HHHhCCC----cHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhh
Confidence 0011111 1122222 34566677888888888889988877777766544
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.4e-20 Score=188.09 Aligned_cols=139 Identities=19% Similarity=0.213 Sum_probs=108.6
Q ss_pred eeEEeecCceEEEEEEecCCCEEEEEEeeccccc--c-------hHH-----------------HHHHHHHHhhccCCce
Q 002647 504 SRIIGEGGFGVVYRGILDDGREVAVKVLKRANQH--G-------GRE-----------------FLAELEMLSRLHHRNL 557 (897)
Q Consensus 504 ~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~--~-------~~~-----------------f~~Ev~iL~~L~HpNI 557 (897)
.+.||+|+||.||+|...+|+.||||+++..... . ... ..+|+++|.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 3679999999999999888999999999754211 1 112 2349999999988776
Q ss_pred eeEeeeeecCCceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhh-hccCCCcEEecCCCCCcEEEc
Q 002647 558 VKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYL-HEDSSPRVIHRDFKSSNILLE 636 (897)
Q Consensus 558 V~Llg~~~~~~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YL-H~~gsp~IIHrDIKpsNILLd 636 (897)
.....+.. ...+|||||+++++|...+. ....+++.+..+++.|++.+|.|| |+.+ |+||||||+|||++
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~----~~~~~~~~~~~~i~~qi~~~L~~l~H~~g---iiHrDlkP~NIli~ 152 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRL----KDAPLSESKARELYLQVIQIMRILYQDCR---LVHADLSEYNLLYH 152 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhh----hcCCCCHHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEE
Confidence 44332222 23489999999887765432 134688999999999999999999 6777 99999999999998
Q ss_pred cCCceEEeccCcchhc
Q 002647 637 HDFTPKVSDFGLARTA 652 (897)
Q Consensus 637 ~~~~vKLsDFGLAr~~ 652 (897)
++.++|+|||++...
T Consensus 153 -~~~v~LiDFG~a~~~ 167 (190)
T cd05147 153 -DGKLYIIDVSQSVEH 167 (190)
T ss_pred -CCcEEEEEccccccC
Confidence 478999999999753
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=9.4e-20 Score=192.68 Aligned_cols=171 Identities=14% Similarity=0.140 Sum_probs=134.3
Q ss_pred hhCCceeeeEEeecCceEEEEEEecCCCEEEEEEeecccccchH---------HHHHHHHHHhhccCCceeeEeeeeecC
Q 002647 497 ATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGR---------EFLAELEMLSRLHHRNLVKLFGVCIED 567 (897)
Q Consensus 497 at~~y~~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~---------~f~~Ev~iL~~L~HpNIV~Llg~~~~~ 567 (897)
..++|...++||.|+||.||+... ++..+|||.+........+ .+.+|+..+.+++|++|..+.+++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 578999999999999999999665 5778999999753322222 267999999999999999998886532
Q ss_pred --------CceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCC
Q 002647 568 --------NNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDF 639 (897)
Q Consensus 568 --------~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~ 639 (897)
...+|||||++|.+|.++.. ++. ....+++.+|..||+.+ ++||||||+||+++.++
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~--------~~~----~~~~~i~~~l~~lH~~g---i~H~Dikp~Nili~~~g 172 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE--------ISE----DVKAKIKASIESLHQHG---MVSGDPHKGNFIVSKNG 172 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh--------ccH----HHHHHHHHHHHHHHHcC---CccCCCChHHEEEeCCC
Confidence 35789999999999987641 222 24568999999999998 99999999999999988
Q ss_pred ceEEeccCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHH
Q 002647 640 TPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELL 698 (897)
Q Consensus 640 ~vKLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELl 698 (897)
++|+|||........... -.++....+..++|||+||+.+..+.
T Consensus 173 -i~liDfg~~~~~~e~~a~--------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 173 -LRIIDLSGKRCTAQRKAK--------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred -EEEEECCCcccccchhhH--------------HHHHHHhHhcccccccceeEeehHHH
Confidence 999999988754221111 11455566778999999999987665
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.3e-19 Score=181.45 Aligned_cols=138 Identities=23% Similarity=0.247 Sum_probs=110.5
Q ss_pred eeEEeecCceEEEEEEecCCCEEEEEEeecccccc--------------------------hHHHHHHHHHHhhccCCce
Q 002647 504 SRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHG--------------------------GREFLAELEMLSRLHHRNL 557 (897)
Q Consensus 504 ~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~--------------------------~~~f~~Ev~iL~~L~HpNI 557 (897)
...||+|+||.||+|...+|+.||||+++...... ...+.+|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 46899999999999998789999999987542110 1124578999999999987
Q ss_pred eeEeeeeecCCceEEEEeeccCCccccc-cccCCCCCCCCCHHHHHHHHHHHHHHHhhhhc-cCCCcEEecCCCCCcEEE
Q 002647 558 VKLFGVCIEDNNRCLVYELIHNGSLESH-LHGDDKVNGPLDWDARMKIALGAARGLAYLHE-DSSPRVIHRDFKSSNILL 635 (897)
Q Consensus 558 V~Llg~~~~~~~~~LV~Ey~~gGSL~~~-L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~-~gsp~IIHrDIKpsNILL 635 (897)
.....+... ..+|||||++++++... +. ...++..+..+++.|++.+|.+||. .+ |+||||||+|||+
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~-----~~~~~~~~~~~i~~~l~~~l~~lH~~~g---ivHrDlkP~NIll 151 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLK-----DVPLEEEEAEELYEQVVEQMRRLYQEAG---LVHGDLSEYNILY 151 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhh-----hccCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCChhhEEE
Confidence 544443332 34899999998865433 32 2457888999999999999999999 77 9999999999999
Q ss_pred ccCCceEEeccCcchhc
Q 002647 636 EHDFTPKVSDFGLARTA 652 (897)
Q Consensus 636 d~~~~vKLsDFGLAr~~ 652 (897)
+ ++.++|+|||++...
T Consensus 152 ~-~~~~~liDFG~a~~~ 167 (190)
T cd05145 152 H-DGKPYIIDVSQAVEL 167 (190)
T ss_pred E-CCCEEEEEcccceec
Confidence 9 889999999999864
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.5e-19 Score=189.97 Aligned_cols=267 Identities=21% Similarity=0.279 Sum_probs=196.2
Q ss_pred CCceeeeEEeecCceEEEEEE-ecCCCEEEEEEeecccccchHHHHHHHHHHhhcc-CCceeeEeeeeecCCceEEEEee
Q 002647 499 NGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLH-HRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~-l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~-HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
-.|.+.++||+|.||++|.|+ +-+++.||||.--... ..-++..|....+.|. .++|-..+.|-.++..-.||+|.
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidL 105 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDL 105 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhh
Confidence 468899999999999999999 5579999999753322 2357888999998884 68888888887888788999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEcc-----CCceEEeccCcchh
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEH-----DFTPKVSDFGLART 651 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~-----~~~vKLsDFGLAr~ 651 (897)
+ |-||+|++.- ....++.++++.||.|++.-++|+|++. +|.|||||+|+||.. ...+.|+|||+|+.
T Consensus 106 L-GPSLEDLFD~---CgR~FSvKTV~miA~Qmi~rie~vH~k~---LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~ 178 (449)
T KOG1165|consen 106 L-GPSLEDLFDL---CGRRFSVKTVAMIAKQMITRIEYVHEKD---LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKE 178 (449)
T ss_pred h-CcCHHHHHHH---hcCcccHHhHHHHHHHHHHHHHHHHhcc---eeecccCccceeecCCCCCCCceEEEEeccchhh
Confidence 8 6688887742 2457999999999999999999999998 999999999999953 35699999999998
Q ss_pred cccCCCc-c----cccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhccccc
Q 002647 652 ALDEGNK-H----ISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTK 726 (897)
Q Consensus 652 ~~~~~~~-~----~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~ 726 (897)
..+.... + ......||.+||+=....+..-+.+.|+-|||-|+++.|-|..||.+...+..... +....
T Consensus 179 YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~k------YeKIG 252 (449)
T KOG1165|consen 179 YRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEK------YEKIG 252 (449)
T ss_pred hcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHH------HHHhc
Confidence 7654331 1 22446799999999999999999999999999999999999999986544322211 11111
Q ss_pred ccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHhhhhhc
Q 002647 727 EGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNEFDET 784 (897)
Q Consensus 727 e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~~e~~~~ 784 (897)
+..+..--..+...++ ++....+..++ ..+-++-|...-+...+..+.....+.
T Consensus 253 e~Kr~T~i~~Lc~g~P-~efa~Yl~yvR---~L~F~E~PDYdylr~Lf~dvldr~g~t 306 (449)
T KOG1165|consen 253 ETKRSTPIEVLCEGFP-EEFATYLRYVR---RLDFFETPDYDYLRKLFDDVLDRLGET 306 (449)
T ss_pred cccccCCHHHHHhcCH-HHHHHHHHHHH---hcCcccCCCHHHHHHHHHHHHHhcCCc
Confidence 1111111111222222 34444444544 456667788877777666666555444
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.7e-18 Score=199.10 Aligned_cols=217 Identities=24% Similarity=0.388 Sum_probs=162.4
Q ss_pred HhhccCCceeeEeeeeecCCceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCC
Q 002647 549 LSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDF 628 (897)
Q Consensus 549 L~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDI 628 (897)
|+.+.|.|+.+++|.+.++...+.|.+||..|+|.|.+.. ....++|.-...++.+|++||+|||... -..|+.+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~---~~~~~d~~F~~s~~rdi~~Gl~ylh~s~--i~~hg~l 75 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN---EDIKLDYFFILSFIRDISKGLAYLHNSP--IGYHGAL 75 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc---cccCccHHHHHHHHHHHHHHHHHHhcCc--ceeeeee
Confidence 4678999999999999999999999999999999999964 3457999999999999999999999643 3399999
Q ss_pred CCCcEEEccCCceEEeccCcchhcccCCCcccccccccccccCChhhhhcC-------CCCccccEEechhHHHHHHhCC
Q 002647 629 KSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTG-------HLLVKSDVYSYGVVLLELLTGR 701 (897)
Q Consensus 629 KpsNILLd~~~~vKLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~-------~~t~kSDVwSfGvIL~ELlTGk 701 (897)
+++|+++|....+||+|||+.................-..-|.|||.+... ..+.+.||||||++++|+++.+
T Consensus 76 ~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~ 155 (484)
T KOG1023|consen 76 KSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRS 155 (484)
T ss_pred ccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhcc
Confidence 999999999999999999998754321111111222234579999998753 2467899999999999999999
Q ss_pred CCCCCCCCCCc-hhhHHhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 002647 702 KPVDLSQPPGQ-ENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVC 778 (897)
Q Consensus 702 ~Pfd~~~~~~~-~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~~l~ 778 (897)
.||+....... ..++.++.. .-...+-|.+.... +....+..++.+||..+|.+||++..|-..++.+.
T Consensus 156 ~~~~~~~~~~~~~eii~~~~~------~~~~~~rP~i~~~~--e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~ 225 (484)
T KOG1023|consen 156 GPFDLRNLVEDPDEIILRVKK------GGSNPFRPSIELLN--ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTIN 225 (484)
T ss_pred CccccccccCChHHHHHHHHh------cCCCCcCcchhhhh--hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhc
Confidence 99986433222 233333221 11111222221111 33346889999999999999999999988776554
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.5e-18 Score=185.81 Aligned_cols=234 Identities=24% Similarity=0.355 Sum_probs=149.4
Q ss_pred CceeeeEEeecCceEEEEEEec-CCCEEEEEEeeccc---ccchHHHHHHHHHHhhcc----------CCceeeEeeeee
Q 002647 500 GFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRAN---QHGGREFLAELEMLSRLH----------HRNLVKLFGVCI 565 (897)
Q Consensus 500 ~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~---~~~~~~f~~Ev~iL~~L~----------HpNIV~Llg~~~ 565 (897)
.+...+.||.|+++.||.++.. +|+++|||++.... ....+++++|.-....+. |-.++..++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 3456789999999999999975 58999999985432 223456777765555532 222322222221
Q ss_pred ---------cCC--------ceEEEEeeccCCcccccccc---CCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEe
Q 002647 566 ---------EDN--------NRCLVYELIHNGSLESHLHG---DDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIH 625 (897)
Q Consensus 566 ---------~~~--------~~~LV~Ey~~gGSL~~~L~~---~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIH 625 (897)
... +.+++|+-+ .++|.+++.. .......+....++.+..|+++.+++||..| |+|
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G---lVH 168 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG---LVH 168 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EEE
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc---eEe
Confidence 111 336777777 4588777532 1122234566778888899999999999999 999
Q ss_pred cCCCCCcEEEccCCceEEeccCcchhcccCCCcccccccccccccCChhhhhcC--------CCCccccEEechhHHHHH
Q 002647 626 RDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTG--------HLLVKSDVYSYGVVLLEL 697 (897)
Q Consensus 626 rDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~--------~~t~kSDVwSfGvIL~EL 697 (897)
+|||++|+|++.+|.++|+||+...... . .... ...+..|.+||..... .++.+.|.|++|++||.|
T Consensus 169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g---~-~~~~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~l 243 (288)
T PF14531_consen 169 GDIKPENFLLDQDGGVFLGDFSSLVRAG---T-RYRC-SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSL 243 (288)
T ss_dssp ST-SGGGEEE-TTS-EEE--GGGEEETT---E-EEEG-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHH
T ss_pred cccceeeEEEcCCCCEEEcChHHHeecC---c-eeec-cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHH
Confidence 9999999999999999999998776432 1 1111 3345789999976542 468899999999999999
Q ss_pred HhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCC
Q 002647 698 LTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHR 764 (897)
Q Consensus 698 lTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~R 764 (897)
++|+.||+......... | .. .... +..+.+..||..+|+.||.+|
T Consensus 244 WC~~lPf~~~~~~~~~~---~-----------------~f-~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 244 WCGRLPFGLSSPEADPE---W-----------------DF-SRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHSS-STCCCGGGSTSG---G-----------------GG-TTSS----HHHHHHHHHHT-SSGGGS
T ss_pred HHccCCCCCCCcccccc---c-----------------cc-hhcC-CcCHHHHHHHHHHccCCcccC
Confidence 99999998543211110 0 11 1223 556778899999999999987
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.3e-17 Score=173.74 Aligned_cols=185 Identities=19% Similarity=0.124 Sum_probs=138.2
Q ss_pred eeeEEeecCceEEEEEEecCCCEEEEEEeeccccc----chHHHHHHHHHHhhcc-CCceeeEeeeeecCCceEEEEeec
Q 002647 503 TSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQH----GGREFLAELEMLSRLH-HRNLVKLFGVCIEDNNRCLVYELI 577 (897)
Q Consensus 503 ~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~----~~~~f~~Ev~iL~~L~-HpNIV~Llg~~~~~~~~~LV~Ey~ 577 (897)
+...|++|+||+||.+.. ++..++.+.+.....- ....|.+|+++|++|+ |+++.+++++ +..+++|||+
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI 80 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL 80 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence 567899999999997766 5788888877654321 1125789999999995 5789898886 4569999999
Q ss_pred cCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCC-CCCcEEEccCCceEEeccCcchhcccCC
Q 002647 578 HNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDF-KSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 578 ~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDI-KpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
.|.+|.+.+.. ....++.|++++|.++|..+ |+|||| ||+|||++.++.++|+|||++.......
T Consensus 81 ~G~~L~~~~~~-----------~~~~~~~qi~~~L~~lH~~G---IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 81 AGAAMYQRPPR-----------GDLAYFRAARRLLQQLHRCG---VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred cCccHHhhhhh-----------hhHHHHHHHHHHHHHHHHCc---CccCCCCCcceEEEcCCCCEEEEECCCceecCCcc
Confidence 99888754310 12357789999999999998 999999 7999999999999999999998543322
Q ss_pred Cc----c-------cccccccccccCChhhhhc-CCCC-ccccEEechhHHHHHHhCCCCCCC
Q 002647 657 NK----H-------ISTHVMGTFGYLAPEYAMT-GHLL-VKSDVYSYGVVLLELLTGRKPVDL 706 (897)
Q Consensus 657 ~~----~-------~~t~~~GT~~Y~APE~l~~-~~~t-~kSDVwSfGvIL~ELlTGk~Pfd~ 706 (897)
.. . .......++.|++|+-..- ...+ ...+.++-|.-+|.++|++.++..
T Consensus 147 ~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 147 RWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 10 0 0112346778888874321 1222 456888999999999999988743
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.1e-19 Score=203.80 Aligned_cols=225 Identities=28% Similarity=0.344 Sum_probs=176.2
Q ss_pred EEeecCceEEEEEEe----cCCCEEEEEEeecccccc--hHHHHHHHHHHhhcc-CCceeeEeeeeecCCceEEEEeecc
Q 002647 506 IIGEGGFGVVYRGIL----DDGREVAVKVLKRANQHG--GREFLAELEMLSRLH-HRNLVKLFGVCIEDNNRCLVYELIH 578 (897)
Q Consensus 506 ~LG~G~fGtVyka~l----~~g~~VAVK~lk~~~~~~--~~~f~~Ev~iL~~L~-HpNIV~Llg~~~~~~~~~LV~Ey~~ 578 (897)
++|+|.||.|+++.. +.|..+|+|++++..... ......|-.++..++ |+.+|++...+..+...+++++|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 379999999998762 346778999887543221 124556888888887 9999999999999999999999999
Q ss_pred CCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCc
Q 002647 579 NGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNK 658 (897)
Q Consensus 579 gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~ 658 (897)
+|.|...+.. ....++.....+...++-+++++|+.+ |+|||+|++||+++.+|.+|+.|||+++...+....
T Consensus 81 gg~lft~l~~----~~~f~~~~~~~~~aelaLald~lh~l~---iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~ 153 (612)
T KOG0603|consen 81 GGDLFTRLSK----EVMFDELDVAFYLAELALALDHLHKLG---IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA 153 (612)
T ss_pred cchhhhcccc----CCchHHHHHHHHHHHHHHHHhhcchhH---HHHhcccccceeecccCccccCCchhhhHhHhhhhc
Confidence 9999988843 345777777788888999999999998 999999999999999999999999999876543222
Q ss_pred ccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhc
Q 002647 659 HISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIE 738 (897)
Q Consensus 659 ~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~ 738 (897)
+||..|||||++. .....+|-||||++.+||+||..||.. +. ...++.. .
T Consensus 154 ------cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~-------~~---~~~Il~~------------~ 203 (612)
T KOG0603|consen 154 ------CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG-------DT---MKRILKA------------E 203 (612)
T ss_pred ------ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch-------HH---HHHHhhh------------c
Confidence 8999999999988 567789999999999999999999963 11 1111110 1
Q ss_pred cCCCHHHHHHHHHHHHHccCCCCCCCCCH
Q 002647 739 SNISYDTLVKVAAIASMCVQPEVSHRPFM 767 (897)
Q Consensus 739 ~~~~~e~~~~L~~Li~~CL~~dP~~RPTm 767 (897)
-..+.+.......++..++..+|..|--.
T Consensus 204 ~~~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 204 LEMPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred cCCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 12344555566677777888888887544
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.73 E-value=1e-17 Score=204.28 Aligned_cols=200 Identities=25% Similarity=0.272 Sum_probs=157.9
Q ss_pred HHHHhhCCceeeeEEeecCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhcc---CCceeeEeeeeecCCc
Q 002647 493 DIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLH---HRNLVKLFGVCIEDNN 569 (897)
Q Consensus 493 ei~~at~~y~~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~---HpNIV~Llg~~~~~~~ 569 (897)
+.+.....|.+.+.||+|+||+||+|+..+|+.||+|+=+....- +|.-=.+++.+|+ -+-|..+...+.-.+.
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~ 768 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQNA 768 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccCCc
Confidence 344456778899999999999999999888999999987653321 1111112333443 1234445555555677
Q ss_pred eEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEc-------cCCceE
Q 002647 570 RCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLE-------HDFTPK 642 (897)
Q Consensus 570 ~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd-------~~~~vK 642 (897)
.+||+||.+.|+|.+++. ..+.++|...+.++.|+++.++.||..+ |||+||||+|+||. ++..++
T Consensus 769 S~lv~ey~~~Gtlld~~N----~~~~m~e~lv~~~~~qml~ive~lH~~~---IIHgDiKPDNfll~~~~~~~~~~~~l~ 841 (974)
T KOG1166|consen 769 SVLVSEYSPYGTLLDLIN----TNKVMDEYLVMFFSCQMLRIVEHLHAMG---IIHGDIKPDNFLLRREICADSDSKGLY 841 (974)
T ss_pred ceeeeeccccccHHHhhc----cCCCCCchhhhHHHHHHHHHHHHHHhcc---eecccCCcceeEeecccCCCCcccceE
Confidence 899999999999999995 4567999999999999999999999998 99999999999993 345699
Q ss_pred EeccCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCC
Q 002647 643 VSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRK 702 (897)
Q Consensus 643 LsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~ 702 (897)
|+|||.+..+.--.+......+++|-.+--+|...+..++...|.|.|..+++-||.|+.
T Consensus 842 lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 842 LIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred EEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 999999865433233345567788999999999999999999999999999999999985
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.8e-17 Score=172.20 Aligned_cols=136 Identities=18% Similarity=0.270 Sum_probs=105.9
Q ss_pred eeeEEeecCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhc-----cCCceeeEeeeeecCC---c-eEEE
Q 002647 503 TSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRL-----HHRNLVKLFGVCIEDN---N-RCLV 573 (897)
Q Consensus 503 ~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L-----~HpNIV~Llg~~~~~~---~-~~LV 573 (897)
..+.||+|+||.||. .-.++. .+||++........+++.+|+++++++ .|+||++++|++.++. . +.+|
T Consensus 6 ~~~~LG~G~~~~Vy~-hp~~~~-k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I 83 (210)
T PRK10345 6 EQSPLGTGRHRKCYA-HPEDAQ-RCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI 83 (210)
T ss_pred CcceecCCCceEEEE-CCCCcC-eEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence 347899999999996 223344 479988765444567899999999999 5799999999998863 3 3378
Q ss_pred Eee--ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHH-hhhhccCCCcEEecCCCCCcEEEcc----CCceEEecc
Q 002647 574 YEL--IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGL-AYLHEDSSPRVIHRDFKSSNILLEH----DFTPKVSDF 646 (897)
Q Consensus 574 ~Ey--~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL-~YLH~~gsp~IIHrDIKpsNILLd~----~~~vKLsDF 646 (897)
+|| +.+|+|.+++.. ..+++. ..++.+++.++ +|||+++ |+||||||+|||++. +..++|+||
T Consensus 84 ~e~~G~~~~tL~~~l~~-----~~~~e~--~~~~~~~L~~l~~yLh~~~---IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 84 ADFDGKPSITLTEFAEQ-----CRYEED--VAQLRQLLKKLKRYLLDNR---IVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred ecCCCCcchhHHHHHHc-----ccccHh--HHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 999 567999999953 235555 35677888777 9999998 999999999999974 347999995
Q ss_pred Ccch
Q 002647 647 GLAR 650 (897)
Q Consensus 647 GLAr 650 (897)
+.+.
T Consensus 154 ~G~~ 157 (210)
T PRK10345 154 IGES 157 (210)
T ss_pred CCCc
Confidence 4443
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=8.1e-17 Score=166.23 Aligned_cols=134 Identities=21% Similarity=0.284 Sum_probs=113.1
Q ss_pred eEEeecCceEEEEEEecCCCEEEEEEeeccccc--------chHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRANQH--------GGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~--------~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
+.||+|++|.||+|.. +|..|+||+....... ....+.+|++++..++|+++.....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999988 5788999986532211 123578899999999999988877777777888999999
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchh
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLART 651 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~ 651 (897)
++|++|.+++... .+ .+..++.+++.+|.+||..+ ++|+|++|+|||++ ++.++|+|||++..
T Consensus 81 ~~G~~L~~~~~~~-------~~-~~~~i~~~i~~~l~~lH~~~---i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSN-------GM-EELELSREIGRLVGKLHSAG---IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhc-------cH-HHHHHHHHHHHHHHHHHhCC---cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999988421 12 78899999999999999988 99999999999999 78999999998864
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.1e-17 Score=180.92 Aligned_cols=199 Identities=21% Similarity=0.230 Sum_probs=139.8
Q ss_pred cCCceeeEeeeeec---------------------------CCceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHH
Q 002647 553 HHRNLVKLFGVCIE---------------------------DNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIA 605 (897)
Q Consensus 553 ~HpNIV~Llg~~~~---------------------------~~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia 605 (897)
+|||||+++++|.+ ...+|+||.-.+. +|.+||.. ...+...+.-|+
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~-----~~~s~r~~~~~l 347 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWT-----RHRSYRTGRVIL 347 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhc-----CCCchHHHHHHH
Confidence 59999999998754 1245888887755 89988852 346677788899
Q ss_pred HHHHHHHhhhhccCCCcEEecCCCCCcEEEc--cCC--ceEEeccCcchhcccC----CCcccccccccccccCChhhhh
Q 002647 606 LGAARGLAYLHEDSSPRVIHRDFKSSNILLE--HDF--TPKVSDFGLARTALDE----GNKHISTHVMGTFGYLAPEYAM 677 (897)
Q Consensus 606 ~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd--~~~--~vKLsDFGLAr~~~~~----~~~~~~t~~~GT~~Y~APE~l~ 677 (897)
.|+++|+.|||+++ |.|||+|++||||. +|. .+.|+|||++-..... ..........|...-||||+..
T Consensus 348 aQlLEav~hL~~hg---vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~t 424 (598)
T KOG4158|consen 348 AQLLEAVTHLHKHG---VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIAT 424 (598)
T ss_pred HHHHHHHHHHHHcc---chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhh
Confidence 99999999999998 99999999999994 333 4789999987532211 1111223456788899999986
Q ss_pred cCC--C----CccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhccCCCHHHHHHHHH
Q 002647 678 TGH--L----LVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAA 751 (897)
Q Consensus 678 ~~~--~----t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~ 751 (897)
..+ . ..|+|.|+.|.+.||+++...||.... +...+...+ .+..+. ..+..+...+.+
T Consensus 425 a~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rG-em~L~~r~Y------qe~qLP---------alp~~vpp~~rq 488 (598)
T KOG4158|consen 425 AVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRG-EMLLDTRTY------QESQLP---------ALPSRVPPVARQ 488 (598)
T ss_pred cCCCCceeeccchhhhhhhhhhHHHHhccCCcccccc-hheechhhh------hhhhCC---------CCcccCChHHHH
Confidence 432 1 469999999999999999999996411 100111110 011111 123344456788
Q ss_pred HHHHccCCCCCCCCCHHHHHHHHHH
Q 002647 752 IASMCVQPEVSHRPFMGEVVQALKL 776 (897)
Q Consensus 752 Li~~CL~~dP~~RPTm~EVl~~L~~ 776 (897)
++...++.||.+|++..-....|..
T Consensus 489 lV~~lL~r~pskRvsp~iAANvl~L 513 (598)
T KOG4158|consen 489 LVFDLLKRDPSKRVSPNIAANVLNL 513 (598)
T ss_pred HHHHHhcCCccccCCccHHHhHHHH
Confidence 9999999999999987766666654
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.6e-16 Score=169.44 Aligned_cols=143 Identities=19% Similarity=0.167 Sum_probs=111.7
Q ss_pred CCceeeeEEeecCceEEEEEE--ecCCCEEEEEEeeccccc------------------------chHHHHHHHHHHhhc
Q 002647 499 NGFHTSRIIGEGGFGVVYRGI--LDDGREVAVKVLKRANQH------------------------GGREFLAELEMLSRL 552 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~--l~~g~~VAVK~lk~~~~~------------------------~~~~f~~Ev~iL~~L 552 (897)
..|.+.+.||+|+||.||+|. ..+|+.||||+++..... ....+.+|++++.++
T Consensus 28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L 107 (237)
T smart00090 28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL 107 (237)
T ss_pred chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 348888999999999999998 568999999998753211 012356899999999
Q ss_pred cCCc--eeeEeeeeecCCceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCC
Q 002647 553 HHRN--LVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKS 630 (897)
Q Consensus 553 ~HpN--IV~Llg~~~~~~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKp 630 (897)
.+.+ +.+++++ ...++||||+.+++|...+.. ...+...+...++.|++.+|.|||+.+ .|+||||||
T Consensus 108 ~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~g--~iiH~Dikp 177 (237)
T smart00090 108 YEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLK----DVEPEEEEEFELYDDILEEMRKLYKEG--ELVHGDLSE 177 (237)
T ss_pred HhcCCCCCeeeEe----cCceEEEEEecCCcccccccc----cCCcchHHHHHHHHHHHHHHHHHHhcC--CEEeCCCCh
Confidence 7633 3334432 245899999999888766521 234566677899999999999999775 499999999
Q ss_pred CcEEEccCCceEEeccCcchhc
Q 002647 631 SNILLEHDFTPKVSDFGLARTA 652 (897)
Q Consensus 631 sNILLd~~~~vKLsDFGLAr~~ 652 (897)
+||+++ ++.++|+|||.+...
T Consensus 178 ~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 178 YNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred hhEEEE-CCCEEEEEChhhhcc
Confidence 999999 889999999998753
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.7e-16 Score=163.36 Aligned_cols=144 Identities=19% Similarity=0.153 Sum_probs=112.7
Q ss_pred HHHHHhhCCceeeeEEeecCceEEEEEEecCCCEEEEEEeeccccc----------------------chHHHHHHHHHH
Q 002647 492 NDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQH----------------------GGREFLAELEML 549 (897)
Q Consensus 492 ~ei~~at~~y~~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~----------------------~~~~f~~Ev~iL 549 (897)
.++......|.+.+.||+|+||.||++...+|+.||||++...... ....+.+|+.++
T Consensus 8 ~~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 87 (198)
T cd05144 8 HTLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL 87 (198)
T ss_pred HHHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH
Confidence 3444444458888999999999999999888999999987542210 112367789999
Q ss_pred hhccCCc--eeeEeeeeecCCceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecC
Q 002647 550 SRLHHRN--LVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRD 627 (897)
Q Consensus 550 ~~L~HpN--IV~Llg~~~~~~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrD 627 (897)
.++.|.+ +...++ ....++||||+++++|.+.... .....++.+++.++.++|+.+ |+|||
T Consensus 88 ~~l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~----------~~~~~~~~~i~~~l~~lh~~g---i~H~D 150 (198)
T cd05144 88 KALYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRVL----------EDPEEVLDEILEEIVKAYKHG---IIHGD 150 (198)
T ss_pred HHHHHcCCCCCceee----cCCceEEEEEeCCcchhhcccc----------ccHHHHHHHHHHHHHHHHHCC---CCcCC
Confidence 9998874 344443 2355899999999998765420 235678899999999999987 99999
Q ss_pred CCCCcEEEccCCceEEeccCcchhc
Q 002647 628 FKSSNILLEHDFTPKVSDFGLARTA 652 (897)
Q Consensus 628 IKpsNILLd~~~~vKLsDFGLAr~~ 652 (897)
|||+||++++++.++|+|||++...
T Consensus 151 l~p~Nill~~~~~~~liDfg~~~~~ 175 (198)
T cd05144 151 LSEFNILVDDDEKIYIIDWPQMVST 175 (198)
T ss_pred CCcccEEEcCCCcEEEEECCccccC
Confidence 9999999999999999999999654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.9e-16 Score=187.29 Aligned_cols=137 Identities=19% Similarity=0.257 Sum_probs=111.8
Q ss_pred hCCceeeeEEeecCceEEEEEEecCCCEEEEEEe-ec-ccc------cchHHHHHHHHHHhhccCCceeeEeeeeecCCc
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVL-KR-ANQ------HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNN 569 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~~g~~VAVK~l-k~-~~~------~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~ 569 (897)
...|...++||+|+||+||+|.+.+. .+++|+. .. ... ...+.+.+|++++++++|++++....++.....
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE 410 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence 34456678999999999999987644 4444432 21 111 122468899999999999999988888877778
Q ss_pred eEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcc
Q 002647 570 RCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLA 649 (897)
Q Consensus 570 ~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLA 649 (897)
.++||||+++++|.+++. .+..++.+++++|.|||+.+ |+||||||+|||+ +++.++|+|||++
T Consensus 411 ~~lv~E~~~g~~L~~~l~------------~~~~~~~~i~~~L~~lH~~g---iiHrDlkp~NILl-~~~~~~liDFGla 474 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE------------GNPELVRKVGEIVAKLHKAG---IVHGDLTTSNFIV-RDDRLYLIDFGLG 474 (535)
T ss_pred CEEEEEecCCCcHHHHHH------------HHHHHHHHHHHHHHHHHhCC---CccCCCChHHEEE-ECCcEEEEeCccc
Confidence 899999999999998873 45779999999999999988 9999999999999 6789999999999
Q ss_pred hh
Q 002647 650 RT 651 (897)
Q Consensus 650 r~ 651 (897)
+.
T Consensus 475 ~~ 476 (535)
T PRK09605 475 KY 476 (535)
T ss_pred cc
Confidence 75
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.7e-16 Score=161.02 Aligned_cols=130 Identities=22% Similarity=0.317 Sum_probs=106.1
Q ss_pred EEeecCceEEEEEEecCCCEEEEEEeecccc--------cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeec
Q 002647 506 IIGEGGFGVVYRGILDDGREVAVKVLKRANQ--------HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELI 577 (897)
Q Consensus 506 ~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~--------~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~ 577 (897)
.||+|+||.||+|.+. |..|++|+...... .....+.+|++++..++|.++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~~-~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFL-GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeecC-CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 3899999999999964 78899998653211 11245778999999999887665555566667779999999
Q ss_pred cCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchh
Q 002647 578 HNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLART 651 (897)
Q Consensus 578 ~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~ 651 (897)
+|++|.+++... . ..++.+++.+|.+||+.+ ++|+|++|+||+++ ++.++++|||+++.
T Consensus 80 ~g~~l~~~~~~~----~-------~~~~~~i~~~l~~lH~~g---i~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEG----N-------DELLREIGRLVGKLHKAG---IVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhc----H-------HHHHHHHHHHHHHHHHCC---eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 999999887421 0 078999999999999988 99999999999999 88999999999864
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.63 E-value=6.2e-17 Score=183.79 Aligned_cols=240 Identities=21% Similarity=0.243 Sum_probs=159.1
Q ss_pred eeEEeecCceEEEEEEecCC----CEEEEEEeecccccchHHHHHHHHHHhhc-cCCceeeEe------eeeec-----C
Q 002647 504 SRIIGEGGFGVVYRGILDDG----REVAVKVLKRANQHGGREFLAELEMLSRL-HHRNLVKLF------GVCIE-----D 567 (897)
Q Consensus 504 ~~~LG~G~fGtVyka~l~~g----~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L-~HpNIV~Ll------g~~~~-----~ 567 (897)
.+..+..+++.++.....++ +.++.|..+...........+++-.+... +|.+.+..- ..... .
T Consensus 249 ~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d~~~~~~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~~~~~~v~~~ 328 (516)
T KOG1033|consen 249 SKSSERVSSGIVFEKQGKNNSSLREWLKSKRADVDSLCACKYTFRQLGVLVDSSHSNRSILEDLRPSLFESSKRNKVGKK 328 (516)
T ss_pred cccccccccCCchhhhhcccchhhhhccchhhhccchhhhhhhhhhhhheeccccCCcccccCCCCchhhhccccccccc
Confidence 34556666666665553322 33444554444322223333444444333 444433221 01111 2
Q ss_pred CceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccC
Q 002647 568 NNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFG 647 (897)
Q Consensus 568 ~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFG 647 (897)
...++.|++|...+|.+||...+ .....++...+.++.|++.|++| ++ .+|||+||.||+...+..+||.|||
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~-~~e~~s~s~~~~~~~q~~~~~~y---k~---~ihrdlkp~nif~~~d~q~kIgDFg 401 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRR-TGEERSLSLMLDIFKQIAPAVEY---KG---LIHRDLKPSNIFFSDDDQLKIGDFG 401 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCC-cccccchhHHHHHHHhhccchhh---cc---chhhhccccccccccchhhhhhhhh
Confidence 24689999999999999996433 34567889999999999999999 55 8999999999999999999999999
Q ss_pred cchhcccCC----CcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhc
Q 002647 648 LARTALDEG----NKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPL 722 (897)
Q Consensus 648 LAr~~~~~~----~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l 722 (897)
+........ .....+...||..||+||.+.+..|+.|+|||+||+||+||++ -...++..
T Consensus 402 l~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~--------------- 466 (516)
T KOG1033|consen 402 LVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERI--------------- 466 (516)
T ss_pred heeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHH---------------
Confidence 987654333 1223456789999999999999999999999999999999997 33333210
Q ss_pred ccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 002647 723 LTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEV 770 (897)
Q Consensus 723 ~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EV 770 (897)
-...+....++++....+++.+ ..++.+++...|.+||++.++
T Consensus 467 ~t~~d~r~g~ip~~~~~d~p~e-----~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 467 ATLTDIRDGIIPPEFLQDYPEE-----YTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred HhhhhhhcCCCChHHhhcCcHH-----HHHHHHhcCCCcccCchHHHH
Confidence 0011222233343333334433 468889999999999954443
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.62 E-value=4e-15 Score=141.93 Aligned_cols=135 Identities=21% Similarity=0.221 Sum_probs=115.5
Q ss_pred eeeEEeecCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhccC--CceeeEeeeeecCCceEEEEeeccCC
Q 002647 503 TSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHH--RNLVKLFGVCIEDNNRCLVYELIHNG 580 (897)
Q Consensus 503 ~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~H--pNIV~Llg~~~~~~~~~LV~Ey~~gG 580 (897)
+.+.||+|.++.||++...+ ..++||....... ...+.+|+.++..++| .++.++++++...+..+++|||++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 35789999999999999864 7899999865433 4678999999999987 48899998888878899999999987
Q ss_pred ccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchh
Q 002647 581 SLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLART 651 (897)
Q Consensus 581 SL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~ 651 (897)
.+..+ +......++.+++++|++||......++|+||+++|||+++++.+++.|||+++.
T Consensus 79 ~~~~~-----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 79 TLDEV-----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ecccC-----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 77643 5567788899999999999986545699999999999999999999999999874
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.58 E-value=6.7e-15 Score=149.07 Aligned_cols=135 Identities=24% Similarity=0.261 Sum_probs=98.5
Q ss_pred eeEEeecCceEEEEEEecCCCEEEEEEeeccccc--chHH----------------------HHHHHHHHhhccCCc--e
Q 002647 504 SRIIGEGGFGVVYRGILDDGREVAVKVLKRANQH--GGRE----------------------FLAELEMLSRLHHRN--L 557 (897)
Q Consensus 504 ~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~--~~~~----------------------f~~Ev~iL~~L~HpN--I 557 (897)
.+.||+|+||+||+|...+|+.||||+++..... .... ...|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4679999999999999888999999998753211 1111 135666666665443 3
Q ss_pred eeEeeeeecCCceEEEEeeccCCccccc-cccCCCCCCCCCHHHHHHHHHHHHHHHhhhhc-cCCCcEEecCCCCCcEEE
Q 002647 558 VKLFGVCIEDNNRCLVYELIHNGSLESH-LHGDDKVNGPLDWDARMKIALGAARGLAYLHE-DSSPRVIHRDFKSSNILL 635 (897)
Q Consensus 558 V~Llg~~~~~~~~~LV~Ey~~gGSL~~~-L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~-~gsp~IIHrDIKpsNILL 635 (897)
.+.+++ ...++||||++++.+... +... ... .+...++.+++.++.++|. .+ |+||||||+||++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~-----~~~-~~~~~~~~~~~~~l~~lh~~~~---ivH~Dl~p~Nili 148 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDV-----RLL-EDPEELYDQILELMRKLYREAG---LVHGDLSEYNILV 148 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhh-----hhc-ccHHHHHHHHHHHHHHHhhccC---cCcCCCChhhEEE
Confidence 333332 246899999999654322 2110 011 5678899999999999998 66 9999999999999
Q ss_pred ccCCceEEeccCcchhc
Q 002647 636 EHDFTPKVSDFGLARTA 652 (897)
Q Consensus 636 d~~~~vKLsDFGLAr~~ 652 (897)
+ ++.++|+|||.+...
T Consensus 149 ~-~~~~~liDfg~a~~~ 164 (187)
T cd05119 149 D-DGKVYIIDVPQAVEI 164 (187)
T ss_pred E-CCcEEEEECcccccc
Confidence 9 899999999999754
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.6e-15 Score=182.26 Aligned_cols=209 Identities=26% Similarity=0.351 Sum_probs=139.5
Q ss_pred hCCceeeeEEeecCceEEEEEEecC-CCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEee
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILDD-GREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~~-g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey 576 (897)
..+|+.++.|-.|+||.||.++++. .+.+|+|+=+ .+ .+ | +||+.+- ++.+.|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNk-q~-----li------l-----Rnilt~a------~npfvv--- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINK-QN-----LI------L-----RNILTFA------GNPFVV--- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcccc-cc-----hh------h-----hcccccc------CCccee---
Confidence 4678899999999999999999763 5668884322 11 11 1 1222222 122222
Q ss_pred ccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCC
Q 002647 577 IHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656 (897)
Q Consensus 577 ~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~ 656 (897)
|+-...+. .-+++.... +.+++|||..+ |+|||+|++|+||+.-|.+|+.|||+.+......
T Consensus 136 ---gDc~tllk----~~g~lPvdm--------vla~Eylh~yg---ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~ 197 (1205)
T KOG0606|consen 136 ---GDCATLLK----NIGPLPVDM--------VLAVEYLHSYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSL 197 (1205)
T ss_pred ---chhhhhcc----cCCCCcchh--------hHHhHhhccCC---eecCCCCCCcceeeecccccccchhhhhhhhhhc
Confidence 34334442 123344332 67899999887 9999999999999999999999999997532211
Q ss_pred -------C------cccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcc
Q 002647 657 -------N------KHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLL 723 (897)
Q Consensus 657 -------~------~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~ 723 (897)
. +-....++||+.|+|||++..+.|....|.|++|+|+||.+-|+.||+...+++-... .+...
T Consensus 198 atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~--visd~- 274 (1205)
T KOG0606|consen 198 ATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQ--VISDD- 274 (1205)
T ss_pred cchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhh--hhhhh-
Confidence 0 1112346899999999999999999999999999999999999999986543221110 00000
Q ss_pred cccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCC
Q 002647 724 TTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRP 765 (897)
Q Consensus 724 ~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RP 765 (897)
.+..+ .+.....+..+++.+.|+.+|.+|-
T Consensus 275 --i~wpE----------~dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 275 --IEWPE----------EDEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred --ccccc----------cCcCCCHHHHHHHHHHHHhChHhhc
Confidence 00000 0112234567788888999998884
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.52 E-value=5.2e-14 Score=150.33 Aligned_cols=134 Identities=22% Similarity=0.289 Sum_probs=105.4
Q ss_pred eEEe-ecCceEEEEEEecCCCEEEEEEeeccc-------------ccchHHHHHHHHHHhhccCCce--eeEeeeeecCC
Q 002647 505 RIIG-EGGFGVVYRGILDDGREVAVKVLKRAN-------------QHGGREFLAELEMLSRLHHRNL--VKLFGVCIEDN 568 (897)
Q Consensus 505 ~~LG-~G~fGtVyka~l~~g~~VAVK~lk~~~-------------~~~~~~f~~Ev~iL~~L~HpNI--V~Llg~~~~~~ 568 (897)
.+|| .||.|+||++... +..++||+++... ......+.+|++++.+|+|+++ .+.+++...+.
T Consensus 37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 5788 8999999999886 7789999885321 1223467889999999998885 67777654432
Q ss_pred c----eEEEEeeccC-CccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEE
Q 002647 569 N----RCLVYELIHN-GSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKV 643 (897)
Q Consensus 569 ~----~~LV~Ey~~g-GSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKL 643 (897)
. .++||||+++ .+|.+++.. ..++.. .+.+|+.+|.+||+.| |+||||||.|||++.++.++|
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~~-----~~l~~~----~~~~i~~~l~~lH~~G---I~HrDlkp~NILv~~~~~v~L 183 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQE-----APLSEE----QWQAIGQLIARFHDAG---VYHADLNAHNILLDPDGKFWL 183 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHhc-----CCCCHH----HHHHHHHHHHHHHHCC---CCCCCCCchhEEEcCCCCEEE
Confidence 2 2599999997 688888742 235443 3568999999999998 999999999999999999999
Q ss_pred eccCcchh
Q 002647 644 SDFGLART 651 (897)
Q Consensus 644 sDFGLAr~ 651 (897)
+|||.+..
T Consensus 184 IDfg~~~~ 191 (239)
T PRK01723 184 IDFDRGEL 191 (239)
T ss_pred EECCCccc
Confidence 99998875
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.2e-15 Score=178.40 Aligned_cols=254 Identities=24% Similarity=0.299 Sum_probs=188.6
Q ss_pred CCceeeeEEeecCceEEEEEEecC--CCEEEEEEeeccc--ccchHHHHHHHHHHhhcc-CCceeeEeeeeecCCceEEE
Q 002647 499 NGFHTSRIIGEGGFGVVYRGILDD--GREVAVKVLKRAN--QHGGREFLAELEMLSRLH-HRNLVKLFGVCIEDNNRCLV 573 (897)
Q Consensus 499 ~~y~~~~~LG~G~fGtVyka~l~~--g~~VAVK~lk~~~--~~~~~~f~~Ev~iL~~L~-HpNIV~Llg~~~~~~~~~LV 573 (897)
..|.+.+.||+|+|+.|-...... ...+|+|.+.... .........|..+-..+. |.|++.+++.....+..+++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~ 99 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS 99 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence 346666789999999998888643 4556777765443 222233445777777776 99999999999999999999
Q ss_pred EeeccCCcccccc-ccCCCCCCCCCHHHHHHHHHHHHHHHhhhh-ccCCCcEEecCCCCCcEEEccCC-ceEEeccCcch
Q 002647 574 YELIHNGSLESHL-HGDDKVNGPLDWDARMKIALGAARGLAYLH-EDSSPRVIHRDFKSSNILLEHDF-TPKVSDFGLAR 650 (897)
Q Consensus 574 ~Ey~~gGSL~~~L-~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH-~~gsp~IIHrDIKpsNILLd~~~-~vKLsDFGLAr 650 (897)
.||..+|++.+-+ +.. ....+....-.++.|+..++.|+| ..+ +.||||||+|.+++..+ ..|++|||+|.
T Consensus 100 ~~~s~g~~~f~~i~~~~---~~~~~~~~~~~~~~ql~s~l~~~H~~~~---~~h~~ikP~n~~l~~s~~~l~~~df~~At 173 (601)
T KOG0590|consen 100 LSYSDGGSLFSKISHPD---STGTSSSSASRYLPQLNSGLSYLHPENG---VTHRDIKPSNSLLDESGSALKIADFGLAT 173 (601)
T ss_pred cCcccccccccccccCC---ccCCCCcchhhhhhhhccCccccCcccc---cccCCCCCccchhccCCCcccCCCchhhc
Confidence 9999999999988 322 113555667789999999999999 777 99999999999999999 99999999998
Q ss_pred hccc-CCCccccccccc-ccccCChhhhhcCC-CCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccc
Q 002647 651 TALD-EGNKHISTHVMG-TFGYLAPEYAMTGH-LLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKE 727 (897)
Q Consensus 651 ~~~~-~~~~~~~t~~~G-T~~Y~APE~l~~~~-~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e 727 (897)
.... .+.........| ++.|+|||...+.. .....|+||.|+++.-+++|..|++...... .....|...- .
T Consensus 174 ~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~-~~~~~~~~~~----~ 248 (601)
T KOG0590|consen 174 AYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD-GRYSSWKSNK----G 248 (601)
T ss_pred cccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc-ccceeecccc----c
Confidence 7766 455555556778 99999999988754 4678899999999999999999997654432 1222222110 0
Q ss_pred cccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 002647 728 GLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVV 771 (897)
Q Consensus 728 ~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl 771 (897)
. .. ............++...++..++..|.+.+++.
T Consensus 249 ~----~~----~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 249 R----FT----QLPWNSISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred c----cc----cCccccCChhhhhcccccccCCchhcccccccc
Confidence 0 00 001112223455677788889999999988864
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.3e-12 Score=151.30 Aligned_cols=140 Identities=27% Similarity=0.278 Sum_probs=100.9
Q ss_pred eeEEeecCceEEEEEEecCCCEEEEEEeecccccc----------------------------------------hHHHH
Q 002647 504 SRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHG----------------------------------------GREFL 543 (897)
Q Consensus 504 ~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~----------------------------------------~~~f~ 543 (897)
.+.||.|++|.||+|++.+|+.||||+.+...... .-+|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 36799999999999999999999999985431100 01355
Q ss_pred HHHHHHhhcc----CCceeeEeeeee-cCCceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHH-HHhhhhc
Q 002647 544 AELEMLSRLH----HRNLVKLFGVCI-EDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAAR-GLAYLHE 617 (897)
Q Consensus 544 ~Ev~iL~~L~----HpNIV~Llg~~~-~~~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~-gL~YLH~ 617 (897)
+|...+.+++ +.+-+.+-.++. .....+|||||++|++|.+++.... ..+ .+.+++..+++ .+..+|.
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~---~~~---~~~~ia~~~~~~~l~ql~~ 275 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE---AGL---DRKALAENLARSFLNQVLR 275 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHh---cCC---CHHHHHHHHHHHHHHHHHh
Confidence 5666666553 333344433333 2346799999999999998764211 112 24556776666 4788898
Q ss_pred cCCCcEEecCCCCCcEEEccCCceEEeccCcchhc
Q 002647 618 DSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTA 652 (897)
Q Consensus 618 ~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~ 652 (897)
.+ ++|+|+||.||++++++.++|+|||++...
T Consensus 276 ~g---~~H~D~hPgNilv~~~g~i~liDfG~~~~l 307 (437)
T TIGR01982 276 DG---FFHADLHPGNIFVLKDGKIIALDFGIVGRL 307 (437)
T ss_pred CC---ceeCCCCcccEEECCCCcEEEEeCCCeeEC
Confidence 87 999999999999999999999999998764
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.32 E-value=6.1e-13 Score=143.78 Aligned_cols=207 Identities=22% Similarity=0.264 Sum_probs=145.1
Q ss_pred HHHHHhhccCCceeeEeeeeecC-----CceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccC
Q 002647 545 ELEMLSRLHHRNLVKLFGVCIED-----NNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDS 619 (897)
Q Consensus 545 Ev~iL~~L~HpNIV~Llg~~~~~-----~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~g 619 (897)
-...|-++-|.|||++..|+.+. ....++.|||..|+|..+|+...+....+......+|+-||+.||.|||..
T Consensus 117 vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~- 195 (458)
T KOG1266|consen 117 VFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC- 195 (458)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-
Confidence 34556677899999999988654 356899999999999999987766667788888899999999999999986
Q ss_pred CCcEEecCCCCCcEEEccCCceEEeccCcchhcc---cCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHH
Q 002647 620 SPRVIHRDFKSSNILLEHDFTPKVSDFGLARTAL---DEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLE 696 (897)
Q Consensus 620 sp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~---~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~E 696 (897)
.|+|+|+++..+.|++..++-+|++- +.-.... ............+-++|.+||+-...+.+.++|||+||+..+|
T Consensus 196 ~PpiihgnlTc~tifiq~ngLIkig~-~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAle 274 (458)
T KOG1266|consen 196 DPPIIHGNLTCDTIFIQHNGLIKIGS-VAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALE 274 (458)
T ss_pred CCccccCCcchhheeecCCceEEecc-cCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHH
Confidence 68999999999999999999888842 1111000 0001111122346789999998777788889999999999999
Q ss_pred HHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002647 697 LLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773 (897)
Q Consensus 697 LlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~ 773 (897)
|..|..--..... ....-+.-....+...++ .-+.++..|++.+|..||+|++++..
T Consensus 275 mailEiq~tnseS-~~~~ee~ia~~i~~len~-------------------lqr~~i~kcl~~eP~~rp~ar~llfH 331 (458)
T KOG1266|consen 275 MAILEIQSTNSES-KVEVEENIANVIIGLENG-------------------LQRGSITKCLEGEPNGRPDARLLLFH 331 (458)
T ss_pred HHHheeccCCCcc-eeehhhhhhhheeeccCc-------------------cccCcCcccccCCCCCCcchhhhhcC
Confidence 9887653111100 000000000111110000 11246789999999999999998654
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.9e-11 Score=121.42 Aligned_cols=131 Identities=18% Similarity=0.102 Sum_probs=98.6
Q ss_pred eeEEeecCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhccCCceee-EeeeeecCCceEEEEeeccCCcc
Q 002647 504 SRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVK-LFGVCIEDNNRCLVYELIHNGSL 582 (897)
Q Consensus 504 ~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~-Llg~~~~~~~~~LV~Ey~~gGSL 582 (897)
.+.|+.|.++.||++... +..|++|....... ....+.+|+++++.+.+.+++. ++.+. ....++||||+++.++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcc
Confidence 367899999999999876 77899998764432 2245688999999997666553 44333 2345899999999887
Q ss_pred ccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccC--CCcEEecCCCCCcEEEccCCceEEeccCcchh
Q 002647 583 ESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDS--SPRVIHRDFKSSNILLEHDFTPKVSDFGLART 651 (897)
Q Consensus 583 ~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~g--sp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~ 651 (897)
.+.. . ....++.+++++|+.||..+ ...++|+|+++.||+++ ++.++++|||.+..
T Consensus 79 ~~~~---------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 79 LTED---------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cccc---------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 6431 0 11345678999999999876 23469999999999999 67899999998763
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.20 E-value=8.6e-12 Score=146.94 Aligned_cols=144 Identities=19% Similarity=0.213 Sum_probs=93.5
Q ss_pred hCCceeeeEEeecCceEEEEEEecC-CCEEEEEEeeccccc----------------------------------chH--
Q 002647 498 TNGFHTSRIIGEGGFGVVYRGILDD-GREVAVKVLKRANQH----------------------------------GGR-- 540 (897)
Q Consensus 498 t~~y~~~~~LG~G~fGtVyka~l~~-g~~VAVK~lk~~~~~----------------------------------~~~-- 540 (897)
...|+. +.||.|++|.||+|++++ |+.||||+++..... ..+
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 345765 789999999999999987 999999998643110 011
Q ss_pred ----HHHHHHHHHhhcc----CCceeeEeeeeec-CCceEEEEeeccCCcccccc--ccCCCCCCCCCHHHHHHHHHHHH
Q 002647 541 ----EFLAELEMLSRLH----HRNLVKLFGVCIE-DNNRCLVYELIHNGSLESHL--HGDDKVNGPLDWDARMKIALGAA 609 (897)
Q Consensus 541 ----~f~~Ev~iL~~L~----HpNIV~Llg~~~~-~~~~~LV~Ey~~gGSL~~~L--~~~~~~~~~Ls~~~rl~Ia~qIa 609 (897)
+|.+|+..+.+++ +.+.+.+-.++.+ ....+|||||++|+.|.++- .........+.......++.|
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q-- 275 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ-- 275 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH--
Confidence 2444554444442 3344444344433 35678999999999997742 111000011222223333333
Q ss_pred HHHhhhhccCCCcEEecCCCCCcEEEccCC----ceEEeccCcchhc
Q 002647 610 RGLAYLHEDSSPRVIHRDFKSSNILLEHDF----TPKVSDFGLARTA 652 (897)
Q Consensus 610 ~gL~YLH~~gsp~IIHrDIKpsNILLd~~~----~vKLsDFGLAr~~ 652 (897)
+...| ++|+|+||.||+++.++ ++++.|||++...
T Consensus 276 -----if~~G---ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l 314 (537)
T PRK04750 276 -----VFRDG---FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSL 314 (537)
T ss_pred -----HHhCC---eeeCCCChHHeEEecCCCCCCeEEEEecceEEEC
Confidence 34456 99999999999999888 9999999998755
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.6e-11 Score=140.53 Aligned_cols=248 Identities=23% Similarity=0.251 Sum_probs=177.5
Q ss_pred CceeeeEEee--cCceEEEEEEe---cCCCEEEEEEeec--ccccchHHHHHHHHHHhhc-cCCceeeEeeeeecCCceE
Q 002647 500 GFHTSRIIGE--GGFGVVYRGIL---DDGREVAVKVLKR--ANQHGGREFLAELEMLSRL-HHRNLVKLFGVCIEDNNRC 571 (897)
Q Consensus 500 ~y~~~~~LG~--G~fGtVyka~l---~~g~~VAVK~lk~--~~~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~~~~~~~~ 571 (897)
.|.....+|. |.+|.||.+.. .++..+|+|+-+. ........=.+|+...+++ .|+|.++....+..++..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 3456678999 99999999997 3678899998543 2223333445677777777 4999999888899999999
Q ss_pred EEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHH----HHhhhhccCCCcEEecCCCCCcEEEccC-CceEEecc
Q 002647 572 LVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAAR----GLAYLHEDSSPRVIHRDFKSSNILLEHD-FTPKVSDF 646 (897)
Q Consensus 572 LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~----gL~YLH~~gsp~IIHrDIKpsNILLd~~-~~vKLsDF 646 (897)
+-+|++. .+|.++.+.. ...+.....+.++.+... ||..+|... ++|-|+|+.||++..+ ...+++||
T Consensus 195 iqtE~~~-~sl~~~~~~~---~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~---~~~~~~kp~~i~~~~~~~s~~~~df 267 (524)
T KOG0601|consen 195 IQTELCG-ESLQSYCHTP---CNFLPDNLLWNSLRDWLSRDVTALSHLHSNN---IVHDDLKPANIFTTSDWTSCKLTDF 267 (524)
T ss_pred eeecccc-chhHHhhhcc---cccCCchhhhhHHhhhhhcccccccccCCCc---ccccccchhheecccccceeecCCc
Confidence 9999985 6888887643 234666677777777777 999999877 9999999999999999 89999999
Q ss_pred CcchhcccCCCc---ccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcc
Q 002647 647 GLARTALDEGNK---HISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLL 723 (897)
Q Consensus 647 GLAr~~~~~~~~---~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~ 723 (897)
|+...+.+.... .......|...|++||.+. +-++.++|||++|.++.|-.+|-...-.. ....|.+
T Consensus 268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g------~~~~W~~--- 337 (524)
T KOG0601|consen 268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVG------KNSSWSQ--- 337 (524)
T ss_pred ceeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCC------CCCCccc---
Confidence 999876544321 1222336788999999754 56788999999999999999987665321 1112221
Q ss_pred cccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002647 724 TTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 724 ~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~ 772 (897)
++... +..++...-..++..++..+++.++..|++.+++..
T Consensus 338 -----~r~~~---ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 338 -----LRQGY---IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred -----ccccc---CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 01111 011111111233444888899999999998877654
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.16 E-value=3.2e-10 Score=116.93 Aligned_cols=142 Identities=22% Similarity=0.304 Sum_probs=112.5
Q ss_pred eEEeecCceEEEEEEecCCCEEEEEEeecccc-cchHHHHHHHHHHhhccCC--ceeeEeeeeecC---CceEEEEeecc
Q 002647 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRANQ-HGGREFLAELEMLSRLHHR--NLVKLFGVCIED---NNRCLVYELIH 578 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~-~~~~~f~~Ev~iL~~L~Hp--NIV~Llg~~~~~---~~~~LV~Ey~~ 578 (897)
+.|+.|.++.||++...+|+.+++|+...... ....++.+|+++++.+++. ++.+++.+..+. +..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 67899999999999987778999999765332 2346789999999999764 456677776653 25689999999
Q ss_pred CCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccC---------------------------------------
Q 002647 579 NGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDS--------------------------------------- 619 (897)
Q Consensus 579 gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~g--------------------------------------- 619 (897)
|++|.+.+.. ..++..++..++.+++++|.+||+..
T Consensus 84 G~~l~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (223)
T cd05154 84 GRVLRDRLLR-----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAME 158 (223)
T ss_pred CEecCCCCCC-----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHH
Confidence 9988876631 35788888889999999999998531
Q ss_pred --------------CCcEEecCCCCCcEEEcc--CCceEEeccCcchh
Q 002647 620 --------------SPRVIHRDFKSSNILLEH--DFTPKVSDFGLART 651 (897)
Q Consensus 620 --------------sp~IIHrDIKpsNILLd~--~~~vKLsDFGLAr~ 651 (897)
...++|+|+++.|||++. ++.+.|+||+.+..
T Consensus 159 ~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 159 RLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 245899999999999998 66789999998764
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.07 E-value=5.3e-10 Score=130.98 Aligned_cols=166 Identities=20% Similarity=0.248 Sum_probs=127.7
Q ss_pred ecCCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccCCccccccccCCCCCCCCCHH
Q 002647 520 LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWD 599 (897)
Q Consensus 520 l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~ 599 (897)
..++..|.|+..+...........+-++.|+.|+||||++++..+.+++..|||+|-+. -|..++.. +...
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~-------l~~~ 104 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE-------LGKE 104 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH-------hHHH
Confidence 45788999999887666445567788999999999999999999999999999999874 45556632 3355
Q ss_pred HHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcccccccccccccCChhhhhcC
Q 002647 600 ARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTG 679 (897)
Q Consensus 600 ~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~ 679 (897)
.....+.||+.||.+||+.+ .++|++|.-+-|++++.|+.||++|.++........ ......--..|..|+.+...
T Consensus 105 ~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--~~~~~~~~~s~~~P~~~~~s 180 (690)
T KOG1243|consen 105 EVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--PAKSLYLIESFDDPEEIDPS 180 (690)
T ss_pred HHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--ccccchhhhcccChhhcCcc
Confidence 56667899999999999776 599999999999999999999999988764322111 11112223356677654433
Q ss_pred CCCccccEEechhHHHHHHhC
Q 002647 680 HLLVKSDVYSYGVVLLELLTG 700 (897)
Q Consensus 680 ~~t~kSDVwSfGvIL~ELlTG 700 (897)
. -..|.|-||++++|++.|
T Consensus 181 ~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 181 E--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred c--cchhhhhHHHHHHHHhCc
Confidence 2 346999999999999999
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.00 E-value=4e-10 Score=130.81 Aligned_cols=247 Identities=20% Similarity=0.183 Sum_probs=174.0
Q ss_pred HhhCCceeeeEEeecCceEEEEEEec--CCCEEEEEEeecccccchHH--HHHHHHHHhhc-cCCceeeEeeeeecCCce
Q 002647 496 KATNGFHTSRIIGEGGFGVVYRGILD--DGREVAVKVLKRANQHGGRE--FLAELEMLSRL-HHRNLVKLFGVCIEDNNR 570 (897)
Q Consensus 496 ~at~~y~~~~~LG~G~fGtVyka~l~--~g~~VAVK~lk~~~~~~~~~--f~~Ev~iL~~L-~HpNIV~Llg~~~~~~~~ 570 (897)
....+|..+..||.|.|+.|++...+ ++..+++|.+.+.......+ -+.|+-+...+ .|.+++++...+..-...
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~ 341 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQG 341 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccc
Confidence 34567889999999999999998843 57889999887644333222 23566666666 588888887777776777
Q ss_pred EEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccC-CceEEeccCcc
Q 002647 571 CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHD-FTPKVSDFGLA 649 (897)
Q Consensus 571 ~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~-~~vKLsDFGLA 649 (897)
++=-||++++++...+ .....++...++++..|++.++.++|+.. ++|+|+||+||++..+ +..++.|||++
T Consensus 342 ~ip~e~~~~~s~~l~~----~~~~~~d~~~~~~~~~q~~~~l~~i~s~~---~~~~d~~psni~i~~~~~~~~~~~~~~~ 414 (524)
T KOG0601|consen 342 YIPLEFCEGGSSSLRS----VTSQMLDEDPRLRLTAQILTALNVIHSKL---FVHLDVKPSNILISNDGFFSKLGDFGCW 414 (524)
T ss_pred cCchhhhcCcchhhhh----HHHHhcCcchhhhhHHHHHhccccccchh---hhcccccccceeeccchhhhhccccccc
Confidence 8999999999887666 22345788889999999999999999776 9999999999999876 88999999988
Q ss_pred hhcccCCCcccccccccccccC--ChhhhhcCCCCccccEEechhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccc
Q 002647 650 RTALDEGNKHISTHVMGTFGYL--APEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKE 727 (897)
Q Consensus 650 r~~~~~~~~~~~t~~~GT~~Y~--APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e 727 (897)
..+.-.. ......-+++ +++......+..+.|+||||.-+.|.++|..--. +.+.|....
T Consensus 415 t~~~~~~-----~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~--------~~~~~~~i~----- 476 (524)
T KOG0601|consen 415 TRLAFSS-----GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSE--------SGVQSLTIR----- 476 (524)
T ss_pred cccceec-----ccccccccccccchhhccccccccccccccccccccccccCcccCc--------ccccceeee-----
Confidence 6321110 1112223344 5555556678899999999999999999875321 222222110
Q ss_pred cccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 002647 728 GLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775 (897)
Q Consensus 728 ~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EVl~~L~ 775 (897)
...+ ...+..- +.+..+...+...++..||.+.+.....+
T Consensus 477 ------~~~~-p~~~~~~-~~~q~~~kv~~~~~~~~~~l~~~l~~~~~ 516 (524)
T KOG0601|consen 477 ------SGDT-PNLPGLK-LQLQVLLKVMINPDRKRRPSAVELSLHSE 516 (524)
T ss_pred ------cccc-cCCCchH-HhhhhhhhhhcCCccccchhhhhhcccch
Confidence 0000 0111122 45566777888999999998888765443
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=98.99 E-value=4e-09 Score=109.73 Aligned_cols=135 Identities=19% Similarity=0.192 Sum_probs=97.1
Q ss_pred eEEeecCceEEEEEEecC-------CCEEEEEEeeccc----------------------ccchHHHH----HHHHHHhh
Q 002647 505 RIIGEGGFGVVYRGILDD-------GREVAVKVLKRAN----------------------QHGGREFL----AELEMLSR 551 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~~-------g~~VAVK~lk~~~----------------------~~~~~~f~----~Ev~iL~~ 551 (897)
..||.|-=+.||.|...+ +..+|||+.+... ....+.+. +|+..|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468899999999998543 4789999874211 00112233 79999999
Q ss_pred ccC--CceeeEeeeeecCCceEEEEeeccCCcccc-ccccCCCCCCCCCHHHHHHHHHHHHHHHhhh-hccCCCcEEecC
Q 002647 552 LHH--RNLVKLFGVCIEDNNRCLVYELIHNGSLES-HLHGDDKVNGPLDWDARMKIALGAARGLAYL-HEDSSPRVIHRD 627 (897)
Q Consensus 552 L~H--pNIV~Llg~~~~~~~~~LV~Ey~~gGSL~~-~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YL-H~~gsp~IIHrD 627 (897)
+.. -++-.++++ ...+|||||+.++.+.. .|. ...++..+...+..+++.+|.+| |+.+ |||+|
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk-----d~~~~~~~~~~i~~~i~~~l~~l~H~~g---lVHGD 150 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK-----DAKLNDEEMKNAYYQVLSMMKQLYKECN---LVHAD 150 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh-----ccccCHHHHHHHHHHHHHHHHHHHHhCC---eecCC
Confidence 864 344455543 45689999997754422 221 12355566778889999999999 7777 99999
Q ss_pred CCCCcEEEccCCceEEeccCcchhc
Q 002647 628 FKSSNILLEHDFTPKVSDFGLARTA 652 (897)
Q Consensus 628 IKpsNILLd~~~~vKLsDFGLAr~~ 652 (897)
|++.|||++ ++.+.|+|||.+...
T Consensus 151 Ls~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 151 LSEYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred CCHHHEEEE-CCcEEEEECCCceeC
Confidence 999999997 468999999988643
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.3e-08 Score=116.51 Aligned_cols=170 Identities=18% Similarity=0.224 Sum_probs=130.3
Q ss_pred ceEEEEEEe-cCCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeec----CCceEEEEeeccC-Cccccc
Q 002647 512 FGVVYRGIL-DDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIE----DNNRCLVYELIHN-GSLESH 585 (897)
Q Consensus 512 fGtVyka~l-~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~----~~~~~LV~Ey~~g-GSL~~~ 585 (897)
-.+.||+.. .||..+++|+++............-+++++++.|.|+|++.+++.. +...+|||+|.++ ++|.++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 367899984 4899999999966554444445567899999999999999998873 3467899999985 577765
Q ss_pred cccCCC-----------CCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhccc
Q 002647 586 LHGDDK-----------VNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALD 654 (897)
Q Consensus 586 L~~~~~-----------~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~ 654 (897)
-..... .+..+++...|.++.|+..||.++|+.| +.-+-|.+++||++.+.+++|+..|.......
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG---LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG---LACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC---ceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 443221 2234778999999999999999999998 89999999999999999999999888765543
Q ss_pred CCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCC
Q 002647 655 EGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703 (897)
Q Consensus 655 ~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~P 703 (897)
+.... +.. -.+-|.=.||.+|+.|.||..-
T Consensus 446 d~~~~----------------le~---~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 446 DPTEP----------------LES---QQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred CCCcc----------------hhH---HhhhhHHHHHHHHHHHhhcccc
Confidence 32111 111 1245777899999999999753
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.9e-09 Score=130.95 Aligned_cols=249 Identities=22% Similarity=0.248 Sum_probs=166.7
Q ss_pred hhCCceeeeEEeecCceEEEEEEec-CCCEEEEEEeecccc---cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEE
Q 002647 497 ATNGFHTSRIIGEGGFGVVYRGILD-DGREVAVKVLKRANQ---HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCL 572 (897)
Q Consensus 497 at~~y~~~~~LG~G~fGtVyka~l~-~g~~VAVK~lk~~~~---~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~L 572 (897)
..+++.+.+-+-+|.++.++.+.-. .|...+.|....... ...+....+-.++-..++|-++....-+.-....+|
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 4566777788889999999988743 343444444432221 111223333334433456777766655555678899
Q ss_pred EEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhc
Q 002647 573 VYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTA 652 (897)
Q Consensus 573 V~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~ 652 (897)
+++|+.+++|...||.. +.++.+-....+..+..+++|||... ++|||++|.|+|+..++..+++|||.....
T Consensus 882 ~~~~~~~~~~~Skl~~~----~~~saepaRs~i~~~vqs~e~L~s~~---r~h~~~~p~~~l~~~~gh~~l~~~~t~~~v 954 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNS----GCLSAEPARSPILERVQSLESLHSSL---RKHRDLKPDSLLIAYDGHRPLTDFGTLSKV 954 (1205)
T ss_pred hhHHhccCCchhhhhcC----CCcccccccchhHHHHhhhhccccch---hhcccccccchhhcccCCcccCcccccccc
Confidence 99999999999998753 24555555556667888999999775 899999999999999999999999843211
Q ss_pred cc------C-----------------------CCcccccccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCC
Q 002647 653 LD------E-----------------------GNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703 (897)
Q Consensus 653 ~~------~-----------------------~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~P 703 (897)
.. . ++........||+.|.+||.+.+......+|.|++|++++|.++|..|
T Consensus 955 g~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp 1034 (1205)
T KOG0606|consen 955 GLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPP 1034 (1205)
T ss_pred ccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCC
Confidence 00 0 000112335789999999999999999999999999999999999999
Q ss_pred CCCCCCCCchhhHHhhhhcccccccccccccchhc-cCCCHHHHHHHHHHHHHccCCCCCCCCCHH
Q 002647 704 VDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIE-SNISYDTLVKVAAIASMCVQPEVSHRPFMG 768 (897)
Q Consensus 704 fd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~-~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~ 768 (897)
|+........ +.++...+. ...+.+...+..+++...+..++.+|-.+.
T Consensus 1035 ~na~tpq~~f----------------~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1035 FNAETPQQIF----------------ENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CCCcchhhhh----------------hccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 9865443211 011110000 011223334455677777788888886655
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.75 E-value=5e-08 Score=99.51 Aligned_cols=143 Identities=22% Similarity=0.305 Sum_probs=106.3
Q ss_pred eeeEEeecCceEEEEEEecCCCEEEEEEe-e-ccc------ccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEE
Q 002647 503 TSRIIGEGGFGVVYRGILDDGREVAVKVL-K-RAN------QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 503 ~~~~LG~G~fGtVyka~l~~g~~VAVK~l-k-~~~------~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~ 574 (897)
....|-+|+-+.|+++.+. |+...||.- . ... .-.....++|+++|.+++--.|.-..-++.+...-.|+|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 4578999999999999987 777777752 1 111 122356788999999988666665555666667778999
Q ss_pred eeccC-CccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCC---ceEEeccCcch
Q 002647 575 ELIHN-GSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDF---TPKVSDFGLAR 650 (897)
Q Consensus 575 Ey~~g-GSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~---~vKLsDFGLAr 650 (897)
||+++ -++.+++.... ...........++..|-+.+.-||..+ |||+||..+||+|..++ .+.++|||++.
T Consensus 90 E~~~g~~~vk~~i~~~~--~~~~~d~~~~~~~~~iG~~igklH~nd---iiHGDLTTSNill~~~~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTM--EDESEDEGLAELARRIGELIGKLHDND---IIHGDLTTSNILLRSDGNQITPILIDFGLSS 164 (229)
T ss_pred EeccchhHHHHHHHHHc--cCcccchhHHHHHHHHHHHHHHhhhCC---eecccccccceEEecCCCcCceEEEeecchh
Confidence 99977 47778875422 122333334778888999999999998 99999999999996554 35899999976
Q ss_pred h
Q 002647 651 T 651 (897)
Q Consensus 651 ~ 651 (897)
.
T Consensus 165 ~ 165 (229)
T KOG3087|consen 165 V 165 (229)
T ss_pred c
Confidence 3
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.74 E-value=3.5e-08 Score=100.93 Aligned_cols=130 Identities=22% Similarity=0.275 Sum_probs=99.7
Q ss_pred EEeecCceEEEEEEecCCCEEEEEEe-ec-ccc------cchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeec
Q 002647 506 IIGEGGFGVVYRGILDDGREVAVKVL-KR-ANQ------HGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELI 577 (897)
Q Consensus 506 ~LG~G~fGtVyka~l~~g~~VAVK~l-k~-~~~------~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~ 577 (897)
.+++|+=..+|.+.+. |..+++|.= .+ ... -......+|+.+|.+++--.|-..+-+..+.....|+|||+
T Consensus 3 ~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I 81 (204)
T COG3642 3 LIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI 81 (204)
T ss_pred hhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence 5789999999999875 455666642 21 111 11234678999999987766665555667778889999999
Q ss_pred cCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchh
Q 002647 578 HNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLART 651 (897)
Q Consensus 578 ~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~ 651 (897)
+|-.|.+.|... +..++..|-+-+.-||..+ |||+||.++||++..+. +.++||||+..
T Consensus 82 ~G~~lkd~l~~~-----------~~~~~r~vG~~vg~lH~~g---ivHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 82 EGELLKDALEEA-----------RPDLLREVGRLVGKLHKAG---IVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred CChhHHHHHHhc-----------chHHHHHHHHHHHHHHhcC---eecCCCccceEEEeCCc-EEEEECCcccc
Confidence 998888888421 3567777888889999998 99999999999998765 99999999874
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.68 E-value=9.2e-08 Score=98.99 Aligned_cols=125 Identities=25% Similarity=0.309 Sum_probs=81.7
Q ss_pred EEEEEEecCCCEEEEEEeeccc--------------c-------cc-----hHHHHHHHHHHhhccCCc--eeeEeeeee
Q 002647 514 VVYRGILDDGREVAVKVLKRAN--------------Q-------HG-----GREFLAELEMLSRLHHRN--LVKLFGVCI 565 (897)
Q Consensus 514 tVyka~l~~g~~VAVK~lk~~~--------------~-------~~-----~~~f~~Ev~iL~~L~HpN--IV~Llg~~~ 565 (897)
.||.|...+|..+|||+.+... . .. .....+|.+.|.++..-+ +-+++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 4899998889999999964211 0 00 124668999999997664 44555442
Q ss_pred cCCceEEEEeecc--CCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhh-hhccCCCcEEecCCCCCcEEEccCCceE
Q 002647 566 EDNNRCLVYELIH--NGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAY-LHEDSSPRVIHRDFKSSNILLEHDFTPK 642 (897)
Q Consensus 566 ~~~~~~LV~Ey~~--gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~Y-LH~~gsp~IIHrDIKpsNILLd~~~~vK 642 (897)
..+|||||++ |..+..+. .. .++......++.+++..+.. +|..+ |+|+||...|||++++ .+.
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~-~~-----~~~~~~~~~~~~~il~~~~~~~~~~g---ivHGDLs~~NIlv~~~-~~~ 146 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLK-DV-----DLSPEEPKELLEEILEEIIKMLHKAG---IVHGDLSEYNILVDDG-KVY 146 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHH-HC-----GGGGSTHHHHHHHHHHHHHHHHHCTT---EEESS-STTSEEEETT-CEE
T ss_pred ---CCEEEEEecCCCccchhhHH-hc-----cccchhHHHHHHHHHHHHHHHHHhcC---ceecCCChhhEEeecc-eEE
Confidence 4579999998 54444332 11 12244566777888886666 46777 9999999999999988 999
Q ss_pred EeccCcchhc
Q 002647 643 VSDFGLARTA 652 (897)
Q Consensus 643 LsDFGLAr~~ 652 (897)
|+|||.+...
T Consensus 147 iIDf~qav~~ 156 (188)
T PF01163_consen 147 IIDFGQAVDS 156 (188)
T ss_dssp E--GTTEEET
T ss_pred EEecCcceec
Confidence 9999988643
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.2e-07 Score=103.32 Aligned_cols=141 Identities=18% Similarity=0.106 Sum_probs=100.7
Q ss_pred eEEeecCceEEEEEEecCCCEEEEEEeecccc-----------cchHHHHHHHHHHhhccCCce--eeEeeeeec-----
Q 002647 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRANQ-----------HGGREFLAELEMLSRLHHRNL--VKLFGVCIE----- 566 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~-----------~~~~~f~~Ev~iL~~L~HpNI--V~Llg~~~~----- 566 (897)
+.+-......|++..+. |+.+.||+...... .....+.+|...+.+|...+| ..++++...
T Consensus 28 e~v~~~~~rrvvr~~~~-g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFELA-GKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEEC-CEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 34444444556777664 78899997643221 111247899999999865444 344555543
Q ss_pred CCceEEEEeeccCC-ccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEcc-------C
Q 002647 567 DNNRCLVYELIHNG-SLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEH-------D 638 (897)
Q Consensus 567 ~~~~~LV~Ey~~gG-SL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~-------~ 638 (897)
....+||+|++++- +|.+++.... ....+...+..++.+++..+.-||..| |+|+|++++|||++. +
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~--~~~~~~~~~~~ll~~la~~i~~LH~~G---i~HgDL~~~NiLl~~~~~~~~~~ 181 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWA--TNPPDPRLKRMLIKRVATMVRDMHAAG---INHRDCYICHFLLHLPFPGREED 181 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHHCc---CccCCCChhhEEEeccccCCCCC
Confidence 23468999999875 7888874221 234566778899999999999999998 999999999999975 5
Q ss_pred CceEEeccCcchh
Q 002647 639 FTPKVSDFGLART 651 (897)
Q Consensus 639 ~~vKLsDFGLAr~ 651 (897)
..+.|+||+.++.
T Consensus 182 ~~~~LIDl~r~~~ 194 (268)
T PRK15123 182 LKLSVIDLHRAQI 194 (268)
T ss_pred ceEEEEECCcccc
Confidence 7899999998753
|
|
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.43 E-value=1.1e-07 Score=112.38 Aligned_cols=152 Identities=18% Similarity=0.267 Sum_probs=101.5
Q ss_pred HHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCc-------ccccccccccccCChhhhh
Q 002647 605 ALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNK-------HISTHVMGTFGYLAPEYAM 677 (897)
Q Consensus 605 a~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~-------~~~t~~~GT~~Y~APE~l~ 677 (897)
+.+++.||.|+|... ++||++|.|++|.++.++..||+.|+.+......... ....-..-...|.|||++.
T Consensus 105 l~~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 105 LGNVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hhcccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 445669999999754 7999999999999999999999999988754331111 0111112345799999999
Q ss_pred cCCCCccccEEechhHHHHHHh-CCCCCCCCCCCCchhhHHhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHc
Q 002647 678 TGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMC 756 (897)
Q Consensus 678 ~~~~t~kSDVwSfGvIL~ELlT-Gk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~C 756 (897)
....+.++|+||+|+++|.+.. |+.-++............ .. .+.. ...++.+...++.+=+.+.
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~---~~----~~~~-------~~~~s~~~p~el~~~l~k~ 248 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSR---NL----LNAG-------AFGYSNNLPSELRESLKKL 248 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhh---cc----cccc-------cccccccCcHHHHHHHHHH
Confidence 9888999999999999999995 544444332211111110 00 0000 0112233345566677788
Q ss_pred cCCCCCCCCCHHHHHH
Q 002647 757 VQPEVSHRPFMGEVVQ 772 (897)
Q Consensus 757 L~~dP~~RPTm~EVl~ 772 (897)
+..+...||++.++..
T Consensus 249 l~~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 249 LNGDSAVRPTLDLLLS 264 (700)
T ss_pred hcCCcccCcchhhhhc
Confidence 8999999998877753
|
|
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.3e-06 Score=94.10 Aligned_cols=134 Identities=26% Similarity=0.208 Sum_probs=96.9
Q ss_pred ceeeeEEeecCceEEEEEEecCCCEEEEEEeeccc----------------------ccchHHHHHHHHHHhhccCC--c
Q 002647 501 FHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRAN----------------------QHGGREFLAELEMLSRLHHR--N 556 (897)
Q Consensus 501 y~~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~----------------------~~~~~~f~~Ev~iL~~L~Hp--N 556 (897)
..+.++||-|-=+.||.|...+|.++|||.=+... ........+|.++|.+|.-. .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 45678999999999999999999999999732110 01123467899999998755 5
Q ss_pred eeeEeeeeecCCceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEc
Q 002647 557 LVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLE 636 (897)
Q Consensus 557 IV~Llg~~~~~~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd 636 (897)
+.+.+++ +...+||||++|-.|...- ++.+..-.|+..|++-+.-+-..| |||+|+..=|||++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r---------~~~en~~~il~~il~~~~~~~~~G---iVHGDlSefNIlV~ 236 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR---------LDVENPDEILDKILEEVRKAYRRG---IVHGDLSEFNILVT 236 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc---------CcccCHHHHHHHHHHHHHHHHHcC---ccccCCchheEEEe
Confidence 5555544 4568999999986665332 233334445555555555555566 99999999999999
Q ss_pred cCCceEEeccCcch
Q 002647 637 HDFTPKVSDFGLAR 650 (897)
Q Consensus 637 ~~~~vKLsDFGLAr 650 (897)
+||.+.++||=-+.
T Consensus 237 ~dg~~~vIDwPQ~v 250 (304)
T COG0478 237 EDGDIVVIDWPQAV 250 (304)
T ss_pred cCCCEEEEeCcccc
Confidence 99999999995543
|
|
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.9e-06 Score=90.18 Aligned_cols=106 Identities=24% Similarity=0.234 Sum_probs=83.6
Q ss_pred hHHHHHHHHHHhhccCCc--eeeEeeeeecCC----ceEEEEeeccCC-ccccccccCCCCCCCCCHHHHHHHHHHHHHH
Q 002647 539 GREFLAELEMLSRLHHRN--LVKLFGVCIEDN----NRCLVYELIHNG-SLESHLHGDDKVNGPLDWDARMKIALGAARG 611 (897)
Q Consensus 539 ~~~f~~Ev~iL~~L~HpN--IV~Llg~~~~~~----~~~LV~Ey~~gG-SL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~g 611 (897)
.....+|...+.+|.... +.+.+++..... ..+||+|++++- +|.+++.... .++......++.++++.
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~----~~~~~~~~~ll~~l~~~ 130 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE----QLDPSQRRELLRALARL 130 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc----ccchhhHHHHHHHHHHH
Confidence 346788999988886444 345566655432 348999999874 7888885321 26667788999999999
Q ss_pred HhhhhccCCCcEEecCCCCCcEEEccCC---ceEEeccCcchh
Q 002647 612 LAYLHEDSSPRVIHRDFKSSNILLEHDF---TPKVSDFGLART 651 (897)
Q Consensus 612 L~YLH~~gsp~IIHrDIKpsNILLd~~~---~vKLsDFGLAr~ 651 (897)
++-||+.+ |+|+|+++.|||++.+. .+.++||+.++.
T Consensus 131 i~~lH~~g---i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 131 IAKLHDAG---IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHHHCc---CCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 99999998 99999999999999887 899999998764
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=6.5e-06 Score=86.64 Aligned_cols=138 Identities=15% Similarity=0.142 Sum_probs=102.3
Q ss_pred EeecCceEEEEEEecCCCEEEEEEeecc-----c-ccchHHHHHHHHHHhhccCCc--eeeEeeeee-cC----CceEEE
Q 002647 507 IGEGGFGVVYRGILDDGREVAVKVLKRA-----N-QHGGREFLAELEMLSRLHHRN--LVKLFGVCI-ED----NNRCLV 573 (897)
Q Consensus 507 LG~G~fGtVyka~l~~g~~VAVK~lk~~-----~-~~~~~~f~~Ev~iL~~L~HpN--IV~Llg~~~-~~----~~~~LV 573 (897)
-|+||-+-|++..++ |..+-+|+-... . ......|.+|+..|.+|...+ +.+.+ ++. .. -..+||
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 356888889998776 456888886521 1 335578999999999996543 34444 332 11 235899
Q ss_pred EeeccC-CccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCc--eEEeccCcch
Q 002647 574 YELIHN-GSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFT--PKVSDFGLAR 650 (897)
Q Consensus 574 ~Ey~~g-GSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~--vKLsDFGLAr 650 (897)
+|-+.+ -+|.+++.+. ...+.+...+..++.+++..+.-||+.+ +.|+|+.+.|||++.++. ++++||.-++
T Consensus 104 Te~L~g~~~L~~~l~~~--~~~~~~~~~k~~il~~va~~ia~LH~~G---v~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 104 TEDMAGFISIADWYAQH--AVSPYSDEVRQAMLKAVALAFKKMHSVN---RQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred EEeCCCCccHHHHHhcC--CcCCcchHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 998864 4888887432 1235677888899999999999999998 999999999999986666 9999997665
Q ss_pred h
Q 002647 651 T 651 (897)
Q Consensus 651 ~ 651 (897)
.
T Consensus 179 ~ 179 (216)
T PRK09902 179 R 179 (216)
T ss_pred h
Confidence 3
|
|
| >TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172 | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.3e-05 Score=85.18 Aligned_cols=133 Identities=19% Similarity=0.215 Sum_probs=85.2
Q ss_pred eEEeecCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhccCCce--eeEeeeeecCCceEEEEeeccCCc-
Q 002647 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNL--VKLFGVCIEDNNRCLVYELIHNGS- 581 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNI--V~Llg~~~~~~~~~LV~Ey~~gGS- 581 (897)
..||+|..+.||+. .|..+++|...... ......+|.++++.+..-++ .+.++++...+...+|||+++|..
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~ 81 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRS 81 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccc
Confidence 57899999999984 25567788876432 23567899999999875444 566777766677789999999863
Q ss_pred cccccccCCCCCCCCCHHHHHHHHHHHHHHH---------------------------------------hhhhc-cCCC
Q 002647 582 LESHLHGDDKVNGPLDWDARMKIALGAARGL---------------------------------------AYLHE-DSSP 621 (897)
Q Consensus 582 L~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL---------------------------------------~YLH~-~gsp 621 (897)
+...+. .+......++.++++.+ .+|.. ...+
T Consensus 82 ~~~~~~--------~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~ 153 (226)
T TIGR02172 82 FSRIIS--------DNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTS 153 (226)
T ss_pred hhhhhc--------CCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCC
Confidence 221111 00011111111111111 11111 1234
Q ss_pred cEEecCCCCCcEEEccCCceEEeccCcchh
Q 002647 622 RVIHRDFKSSNILLEHDFTPKVSDFGLART 651 (897)
Q Consensus 622 ~IIHrDIKpsNILLd~~~~vKLsDFGLAr~ 651 (897)
.++|+|+.+.||++++++ +.|+||+.+..
T Consensus 154 ~~~HgD~~~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 154 TCLHGDFQIGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred ceEecCCCCCcEEEcCCC-cEEEechhcCc
Confidence 589999999999999888 99999998753
|
This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636. |
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.21 E-value=4.4e-06 Score=98.61 Aligned_cols=139 Identities=25% Similarity=0.269 Sum_probs=92.5
Q ss_pred eEEeecCceEEEEEEecCCCEEEEEEeecccccc----------------------------------------hHHHHH
Q 002647 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRANQHG----------------------------------------GREFLA 544 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~----------------------------------------~~~f~~ 544 (897)
+-|+.++-|.||+|++++|+.||||+.+..-... +-+|.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 6789999999999999999999999974321100 012445
Q ss_pred HHHHHhhcc----CCceeeEeeeeec-CCceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHH-Hhhhhcc
Q 002647 545 ELEMLSRLH----HRNLVKLFGVCIE-DNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARG-LAYLHED 618 (897)
Q Consensus 545 Ev~iL~~L~----HpNIV~Llg~~~~-~~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~g-L~YLH~~ 618 (897)
|...+.+++ ...-+++=.+|.+ .....|+|||++|-.+.+...-. ...++.+. |+..++++ +..+-..
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~---~~g~d~k~---ia~~~~~~f~~q~~~d 284 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALK---SAGIDRKE---LAELLVRAFLRQLLRD 284 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHH---hcCCCHHH---HHHHHHHHHHHHHHhc
Confidence 555555552 2222333333433 46779999999999888874211 12344333 33333332 3333334
Q ss_pred CCCcEEecCCCCCcEEEccCCceEEeccCcchhc
Q 002647 619 SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTA 652 (897)
Q Consensus 619 gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~ 652 (897)
| +.|.|..|.||+++.++++.+.|||+....
T Consensus 285 g---ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l 315 (517)
T COG0661 285 G---FFHADPHPGNILVRSDGRIVLLDFGIVGRL 315 (517)
T ss_pred C---ccccCCCccceEEecCCcEEEEcCcceecC
Confidence 5 999999999999999999999999998654
|
|
| >PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.3e-05 Score=82.81 Aligned_cols=145 Identities=22% Similarity=0.214 Sum_probs=85.8
Q ss_pred eeEEeecCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhccCCc--eeeEeeeeecC---CceEEEEeecc
Q 002647 504 SRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRN--LVKLFGVCIED---NNRCLVYELIH 578 (897)
Q Consensus 504 ~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpN--IV~Llg~~~~~---~~~~LV~Ey~~ 578 (897)
++.|+.|..+.||+....+ ..+++|..... .....+.+|+.+++.|.... +.+++.++... ...+++|++++
T Consensus 2 i~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~ 78 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD-GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIP 78 (239)
T ss_dssp EEEEEESSSSEEEEEEETT-SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEES
T ss_pred CccCCCCCeeeEEEEEECC-cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEec
Confidence 4689999999999999886 68999997654 34467889999999886443 44566544322 24589999999
Q ss_pred CCcccc----------------c---cccCCCCCCCCCHHH---------HHHH------------HHHHHH-HHhhhhc
Q 002647 579 NGSLES----------------H---LHGDDKVNGPLDWDA---------RMKI------------ALGAAR-GLAYLHE 617 (897)
Q Consensus 579 gGSL~~----------------~---L~~~~~~~~~Ls~~~---------rl~I------------a~qIa~-gL~YLH~ 617 (897)
+..+.. . ||........+.+.. .... ...+.+ .++.++.
T Consensus 79 g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (239)
T PF01636_consen 79 GRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEA 158 (239)
T ss_dssp SEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHh
Confidence 988777 1 111100111111111 0000 011112 2333332
Q ss_pred ----cCCCcEEecCCCCCcEEEc-cCCceEEeccCcchh
Q 002647 618 ----DSSPRVIHRDFKSSNILLE-HDFTPKVSDFGLART 651 (897)
Q Consensus 618 ----~gsp~IIHrDIKpsNILLd-~~~~vKLsDFGLAr~ 651 (897)
.....++|+|+.+.|||++ +++.+.|+||+.+..
T Consensus 159 ~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 159 LLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp HHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred hhccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence 1345699999999999999 667778999987753
|
; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B .... |
| >COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.11 E-value=3.6e-05 Score=86.91 Aligned_cols=267 Identities=16% Similarity=0.175 Sum_probs=155.9
Q ss_pred eeeEEeecCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhc-cCCceeeEeeee------ecCCc-eEEEE
Q 002647 503 TSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRL-HHRNLVKLFGVC------IEDNN-RCLVY 574 (897)
Q Consensus 503 ~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L-~HpNIV~Llg~~------~~~~~-~~LV~ 574 (897)
..+.||+|+-+.+|-.--- ...+-|+...-...... +.++.|... .||-+-.-+.+= -++.. .-+.|
T Consensus 15 ~gr~LgqGgea~ly~l~e~--~d~VAKIYh~Pppa~~a---qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm 89 (637)
T COG4248 15 PGRPLGQGGEADLYTLGEV--RDQVAKIYHAPPPAAQA---QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM 89 (637)
T ss_pred CCccccCCccceeeecchh--hchhheeecCCCchHHH---HHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence 3567999999999865321 12344666543322212 223334333 455332211111 01112 34666
Q ss_pred eeccCC-cccccccc--CCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchh
Q 002647 575 ELIHNG-SLESHLHG--DDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLART 651 (897)
Q Consensus 575 Ey~~gG-SL~~~L~~--~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~ 651 (897)
..+.+. -+.+++.- .++.....+|.-.++.+..+|.+.+-||+.| .+-+|+.++|+|+.+++.|.|.|=.....
T Consensus 90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~G---h~vGDVn~~~~lVsd~~~V~LVdsDsfqi 166 (637)
T COG4248 90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHG---HVVGDVNQNSFLVSDDSKVVLVDSDSFQI 166 (637)
T ss_pred ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcC---CcccccCccceeeecCceEEEEcccceee
Confidence 666553 22223221 1122345799999999999999999999998 88999999999999999999988543322
Q ss_pred cccCCCcccccccccccccCChhhhh-----cCCCCccccEEechhHHHHHHhC-CCCCCCCCCCCch--hhH-Hhhhhc
Q 002647 652 ALDEGNKHISTHVMGTFGYLAPEYAM-----TGHLLVKSDVYSYGVVLLELLTG-RKPVDLSQPPGQE--NLV-AWARPL 722 (897)
Q Consensus 652 ~~~~~~~~~~t~~~GT~~Y~APE~l~-----~~~~t~kSDVwSfGvIL~ELlTG-k~Pfd~~~~~~~~--~lv-~w~~~l 722 (897)
. .+.....-..|...|.+||.-. +-.-+...|.|.|||++++|+.| +.||.+-...... -+. +.+...
T Consensus 167 ~---~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~ 243 (637)
T COG4248 167 N---ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGR 243 (637)
T ss_pred c---cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcce
Confidence 1 1222233456888999999644 23446789999999999999886 9999753321100 000 111111
Q ss_pred cc-ccccccccccchhccCCCHH-HHHHHHHHHHHccCCC--CCCCCCHHHHHHHHHHHHhhhh
Q 002647 723 LT-TKEGLKTIIDPVIESNISYD-TLVKVAAIASMCVQPE--VSHRPFMGEVVQALKLVCNEFD 782 (897)
Q Consensus 723 ~~-~~e~l~~iiDp~l~~~~~~e-~~~~L~~Li~~CL~~d--P~~RPTm~EVl~~L~~l~~e~~ 782 (897)
+. ..+.-.....+ ...++.+ ....+..+..+|+... +.-||+.+-.+..|..+..++.
T Consensus 244 f~ya~~~~~g~~p~--P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~ 305 (637)
T COG4248 244 FAYASDQRRGLKPP--PRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLK 305 (637)
T ss_pred eeechhccCCCCCC--CCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhh
Confidence 11 11111111110 1112222 2245666777887654 5689999999998887766543
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.06 E-value=1.7e-06 Score=101.54 Aligned_cols=182 Identities=18% Similarity=0.148 Sum_probs=135.3
Q ss_pred eEEeecCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhccCCc-eeeEeeeeecCCceEEEEeeccCC-cc
Q 002647 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRN-LVKLFGVCIEDNNRCLVYELIHNG-SL 582 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpN-IV~Llg~~~~~~~~~LV~Ey~~gG-SL 582 (897)
.-+++|++++++|.+-...+...++.+... ....-++++|.+++||| .+..++-+..+...+++++++.+| +-
T Consensus 248 h~fvK~altknpKkRptaeklL~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~ 322 (829)
T KOG0576|consen 248 HNFVKGALTKNPKKRPTAEKLLQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRSS 322 (829)
T ss_pred HHHHHHHhcCCCccCCChhhheeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCccc
Confidence 457899999999988544445556666533 34456889999999999 777777777778889999999887 33
Q ss_pred ccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCccccc
Q 002647 583 ESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIST 662 (897)
Q Consensus 583 ~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~~~t 662 (897)
..... .....+..-+...+...-+++|+|||+.- -+|+| |||..+ +..|..||+....+.... ...
T Consensus 323 ~~~~~---~se~~~~~~~~~~~~r~et~~l~~l~~~~---~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~---~~~ 388 (829)
T KOG0576|consen 323 ALEMT---VSEIALEQYQFAYPLRKETRPLAELHSSY---KVHRD----NILGSE-EEVKLLDFAVPPQLTRTM---KPR 388 (829)
T ss_pred cccCC---hhhHhhhhhhhhhhhhhhccccccccccc---ccCcc----cccccc-cccccccccCCcccCccc---ccc
Confidence 22221 11123444455566777788999999763 48998 777766 688999999887653321 334
Q ss_pred ccccccccCChhhhhcCCCCccccEEechhHHHHHHhCCCCCC
Q 002647 663 HVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 705 (897)
Q Consensus 663 ~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk~Pfd 705 (897)
...+|+.|+|||+...+.+..+-|+|++|+-..+|.-|..|-.
T Consensus 389 t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~ 431 (829)
T KOG0576|consen 389 TAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS 431 (829)
T ss_pred cCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence 5679999999999999999999999999998888888777643
|
|
| >PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY) | Back alignment and domain information |
|---|
Probab=98.05 E-value=4e-05 Score=81.16 Aligned_cols=138 Identities=15% Similarity=0.212 Sum_probs=95.0
Q ss_pred hhCCceeeeEEeecCceEEEEEEecCCCEEEEEEeecccccchHH---------HHHHHHHHhhccCCcee---eEeeee
Q 002647 497 ATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGRE---------FLAELEMLSRLHHRNLV---KLFGVC 564 (897)
Q Consensus 497 at~~y~~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~---------f~~Ev~iL~~L~HpNIV---~Llg~~ 564 (897)
..++|...+++-......|.+-..+ |..+++|..+.......+. ..+++..+.+++...+. .++.+.
T Consensus 29 ~~~~~~~~kv~k~~~r~~ValIei~-~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ 107 (229)
T PF06176_consen 29 LDNNYKIIKVFKNTKRNYVALIEID-GKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA 107 (229)
T ss_pred HhCCceEEEeecCCCccEEEEEEEC-CcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence 5678888898888887778777665 7889999876533322222 33455555555433332 222222
Q ss_pred ec-----CCceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCC
Q 002647 565 IE-----DNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDF 639 (897)
Q Consensus 565 ~~-----~~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~ 639 (897)
.. ....+|||||++|..|.++.. ++. .++..+.++|.-||+.| +.|+|..|.|++++++
T Consensus 108 ekk~~~~~~~~~ll~EYIeG~~l~d~~~--------i~e----~~~~ki~~~ikqlH~~G---~~HGD~hpgNFlv~~~- 171 (229)
T PF06176_consen 108 EKKIFRYTSSYVLLMEYIEGVELNDIED--------IDE----DLAEKIVEAIKQLHKHG---FYHGDPHPGNFLVSNN- 171 (229)
T ss_pred eeeeccceeEEEEEEEEecCeecccchh--------cCH----HHHHHHHHHHHHHHHcC---CccCCCCcCcEEEECC-
Confidence 22 234578999999988876542 222 25566778899999998 9999999999999865
Q ss_pred ceEEeccCcchh
Q 002647 640 TPKVSDFGLART 651 (897)
Q Consensus 640 ~vKLsDFGLAr~ 651 (897)
.+++.||+..+.
T Consensus 172 ~i~iID~~~k~~ 183 (229)
T PF06176_consen 172 GIRIIDTQGKRM 183 (229)
T ss_pred cEEEEECccccc
Confidence 599999987653
|
The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process |
| >cd05150 APH Aminoglycoside 3'-phosphotransferase (APH) | Back alignment and domain information |
|---|
Probab=98.00 E-value=4.4e-05 Score=81.20 Aligned_cols=141 Identities=21% Similarity=0.170 Sum_probs=85.8
Q ss_pred EEeecCc-eEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhcc-CCceeeEeeeeecCCceEEEEeeccCCccc
Q 002647 506 IIGEGGF-GVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLH-HRNLVKLFGVCIEDNNRCLVYELIHNGSLE 583 (897)
Q Consensus 506 ~LG~G~f-GtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~-HpNIV~Llg~~~~~~~~~LV~Ey~~gGSL~ 583 (897)
.|-.|.+ ..||+.... +..+.||+..... ..++.+|+++++.+. +--+.+++++....+..++|||+++|.+|.
T Consensus 5 ~~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~ 80 (244)
T cd05150 5 RVTEGQSGATVYRLDGK-NPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAA 80 (244)
T ss_pred ecCCCCCcCeEEEEcCC-CCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHh
Confidence 3445555 789999865 4778888876543 346778999998884 333456777766656679999999987776
Q ss_pred ccc-------------------ccCCCCCCCCCH--HHHHHHHHH--------------------HHHHHhhhh----cc
Q 002647 584 SHL-------------------HGDDKVNGPLDW--DARMKIALG--------------------AARGLAYLH----ED 618 (897)
Q Consensus 584 ~~L-------------------~~~~~~~~~Ls~--~~rl~Ia~q--------------------Ia~gL~YLH----~~ 618 (897)
... |.......++.. ..++..... +...+..|- ..
T Consensus 81 ~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 160 (244)
T cd05150 81 ALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAE 160 (244)
T ss_pred HhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCc
Confidence 432 111110111110 011100000 111111221 11
Q ss_pred CCCcEEecCCCCCcEEEccCCceEEeccCcch
Q 002647 619 SSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR 650 (897)
Q Consensus 619 gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr 650 (897)
..+.++|+|+.+.|||++++..+.|+||+.+.
T Consensus 161 ~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 161 EDLVVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred CceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 23569999999999999998888999998775
|
The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio |
| >COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.0001 Score=79.12 Aligned_cols=152 Identities=24% Similarity=0.284 Sum_probs=101.2
Q ss_pred ecHHHHHHhhCCceeeeEEee---cCceEEEEEEecCCCEEEEEEeeccccc-------------------chH-----H
Q 002647 489 FTLNDIEKATNGFHTSRIIGE---GGFGVVYRGILDDGREVAVKVLKRANQH-------------------GGR-----E 541 (897)
Q Consensus 489 f~~~ei~~at~~y~~~~~LG~---G~fGtVyka~l~~g~~VAVK~lk~~~~~-------------------~~~-----~ 541 (897)
.+++.+....++..+.+..|. |--..||+|...++..+|||+.+..... ..+ -
T Consensus 35 ~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W 114 (268)
T COG1718 35 RTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAW 114 (268)
T ss_pred HHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHH
Confidence 456667777777777776665 4455799999888999999998532211 011 1
Q ss_pred HHHHHHHHhhccCC--ceeeEeeeeecCCceEEEEeeccCC-ccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhcc
Q 002647 542 FLAELEMLSRLHHR--NLVKLFGVCIEDNNRCLVYELIHNG-SLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHED 618 (897)
Q Consensus 542 f~~Ev~iL~~L~Hp--NIV~Llg~~~~~~~~~LV~Ey~~gG-SL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~ 618 (897)
..+|+.-|+++..- .+-+-+++. .-.|||||+... .-.-.|. .-.+...+...+..++++.+.-|-..
T Consensus 115 ~~kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~Lk-----Dv~~e~~e~~~~~~~~v~~~~~l~~~ 185 (268)
T COG1718 115 ARKEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRLK-----DVPLELEEAEGLYEDVVEYMRRLYKE 185 (268)
T ss_pred HHHHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCCcc-----cCCcCchhHHHHHHHHHHHHHHHHHh
Confidence 33577777776432 233334332 347999999653 2122221 22344446777788888888888773
Q ss_pred CCCcEEecCCCCCcEEEccCCceEEeccCcchhc
Q 002647 619 SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTA 652 (897)
Q Consensus 619 gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~ 652 (897)
+ .+||+||..=|||+. ++.+.|+|||-|...
T Consensus 186 a--~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~ 216 (268)
T COG1718 186 A--GLVHGDLSEYNILVH-DGEPYIIDVSQAVTI 216 (268)
T ss_pred c--CcccccchhhheEEE-CCeEEEEECcccccc
Confidence 3 399999999999999 889999999988653
|
|
| >PLN02876 acyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00015 Score=90.83 Aligned_cols=80 Identities=13% Similarity=0.268 Sum_probs=58.2
Q ss_pred eeEEeecCceEEEEEEecCC---CEEEEEEeeccc-ccchHHHHHHHHHHhhcc-CCce--eeEeeeeecC---CceEEE
Q 002647 504 SRIIGEGGFGVVYRGILDDG---REVAVKVLKRAN-QHGGREFLAELEMLSRLH-HRNL--VKLFGVCIED---NNRCLV 573 (897)
Q Consensus 504 ~~~LG~G~fGtVyka~l~~g---~~VAVK~lk~~~-~~~~~~f~~Ev~iL~~L~-HpNI--V~Llg~~~~~---~~~~LV 573 (897)
.+.|+.|.+..+|+....++ ..+++|+..... ......+.+|+++|+.|. |.++ .+++.+|.+. +..++|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence 57789999999999887654 367777754322 122357889999999995 6665 6778877664 356899
Q ss_pred EeeccCCccc
Q 002647 574 YELIHNGSLE 583 (897)
Q Consensus 574 ~Ey~~gGSL~ 583 (897)
|||++|..+.
T Consensus 123 ME~v~G~~~~ 132 (822)
T PLN02876 123 MEYLEGRIFV 132 (822)
T ss_pred EEecCCcccC
Confidence 9999986543
|
|
| >PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C) | Back alignment and domain information |
|---|
Probab=97.83 E-value=6.2e-05 Score=78.01 Aligned_cols=104 Identities=25% Similarity=0.207 Sum_probs=82.1
Q ss_pred HHHHHHHhhccC-CceeeEeeeeecCCceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCC
Q 002647 543 LAELEMLSRLHH-RNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSP 621 (897)
Q Consensus 543 ~~Ev~iL~~L~H-pNIV~Llg~~~~~~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp 621 (897)
..|.-+|+.+++ +++.+++|+| ..++|.||...+++...-... ..-..-+|..|.+||.++++.+.+|+.....
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~C----G~~~v~E~~~~~~~~~~~~~l-~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~ 81 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSC----GRFYVVEYVGAGSLYGIYRPL-SQFLQSPWEQRAKIALQLLELLEELDHGPLG 81 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeEC----CCEEEEEeecCcccccccccc-ccccccCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 358888888876 6999999999 347899999887665321000 0112468999999999999999999986444
Q ss_pred cEEecCCCCCcEEEccCCceEEeccCcchh
Q 002647 622 RVIHRDFKSSNILLEHDFTPKVSDFGLART 651 (897)
Q Consensus 622 ~IIHrDIKpsNILLd~~~~vKLsDFGLAr~ 651 (897)
.+.-.|++++|+-+++++++|++|...+..
T Consensus 82 ~~~lcDv~~~nfgv~~~~~lk~iDld~v~~ 111 (188)
T PF12260_consen 82 FFYLCDVSPDNFGVNDDGRLKLIDLDDVFV 111 (188)
T ss_pred cEEEeecchHHeEEeCCCcEEEEechhcch
Confidence 588899999999999999999999987653
|
Proteins in this uncharacterised family are described as transmembrane proteins. |
| >PRK10593 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00033 Score=77.54 Aligned_cols=79 Identities=15% Similarity=0.146 Sum_probs=58.3
Q ss_pred ceeeeEEeecCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhccC---CceeeEeeeeecC---CceEEEE
Q 002647 501 FHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHH---RNLVKLFGVCIED---NNRCLVY 574 (897)
Q Consensus 501 y~~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~H---pNIV~Llg~~~~~---~~~~LV~ 574 (897)
....+.||.|..+.||+....++ .+.+|..+.. .....|.+|.+.|+.|.- -.+.+++++|..+ +..+|||
T Consensus 16 ~~~~~~i~~G~~~~vy~~~~~~~-~~~~k~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVm 92 (297)
T PRK10593 16 LSRVECISEQPYAALWALYDSQG-NPMPLMARSF--STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLL 92 (297)
T ss_pred hheeeecCCccceeEEEEEcCCC-CEEEEEeccc--ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEE
Confidence 33457899999999999987655 4667775431 123588999999999853 3567788777543 5679999
Q ss_pred eeccCCcc
Q 002647 575 ELIHNGSL 582 (897)
Q Consensus 575 Ey~~gGSL 582 (897)
|+++++++
T Consensus 93 E~i~G~~~ 100 (297)
T PRK10593 93 ERLRGVSV 100 (297)
T ss_pred eccCCEec
Confidence 99998765
|
|
| >cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00022 Score=75.70 Aligned_cols=74 Identities=18% Similarity=0.226 Sum_probs=46.8
Q ss_pred eEEeecCce-EEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhccCC---ceeeEeeeeecC---CceEEEEeec
Q 002647 505 RIIGEGGFG-VVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHR---NLVKLFGVCIED---NNRCLVYELI 577 (897)
Q Consensus 505 ~~LG~G~fG-tVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~Hp---NIV~Llg~~~~~---~~~~LV~Ey~ 577 (897)
+.|+.|+.. .||+. +..+++|..... ....++.+|.++|..|... -+.++++..... ...++|||++
T Consensus 3 ~~~~~gG~~n~vy~~----~~~~VlR~~~~~--~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i 76 (235)
T cd05155 3 EPVDSGGTDNATFRL----GDDMSVRLPSAA--GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWL 76 (235)
T ss_pred eeccCCCcccceEEc----CCceEEEcCCcc--chHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEee
Confidence 567777776 48875 345777875542 2235788999999888532 233334333222 1348899999
Q ss_pred cCCcccc
Q 002647 578 HNGSLES 584 (897)
Q Consensus 578 ~gGSL~~ 584 (897)
+|.++.+
T Consensus 77 ~G~~l~~ 83 (235)
T cd05155 77 EGETATA 83 (235)
T ss_pred cCCCCCc
Confidence 9987753
|
The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista |
| >KOG1235 consensus Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.75 E-value=9e-05 Score=87.65 Aligned_cols=140 Identities=20% Similarity=0.184 Sum_probs=91.6
Q ss_pred eEEeecCceEEEEEEecCCCEEEEEEeecccccc-------------------------------------hHHHHHHHH
Q 002647 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRANQHG-------------------------------------GREFLAELE 547 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~-------------------------------------~~~f~~Ev~ 547 (897)
+-||.-..|.||+|++++|+.||||+-+..-+.. +-+|.+|.+
T Consensus 167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~ 246 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK 246 (538)
T ss_pred chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence 6799999999999999999999999964321100 113555554
Q ss_pred HHhhc----cCCc---eeeEeeeeec-CCceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccC
Q 002647 548 MLSRL----HHRN---LVKLFGVCIE-DNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDS 619 (897)
Q Consensus 548 iL~~L----~HpN---IV~Llg~~~~-~~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~g 619 (897)
-..+. .|-+ -|.+=.++.+ ...+.|+||||+|..+.|.-.- ....++...+..-+.++..-+-+ ..|
T Consensus 247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i---~~~gi~~~~i~~~l~~~~~~qIf--~~G 321 (538)
T KOG1235|consen 247 NAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAI---DKRGISPHDILNKLVEAYLEQIF--KTG 321 (538)
T ss_pred hHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHH---HHcCCCHHHHHHHHHHHHHHHHH--hcC
Confidence 44433 3545 1223233332 2467999999999988776421 12346665555444443322222 234
Q ss_pred CCcEEecCCCCCcEEEcc----CCceEEeccCcchhc
Q 002647 620 SPRVIHRDFKSSNILLEH----DFTPKVSDFGLARTA 652 (897)
Q Consensus 620 sp~IIHrDIKpsNILLd~----~~~vKLsDFGLAr~~ 652 (897)
++|.|=.|.||+++. ++.+.+-|||+...+
T Consensus 322 ---ffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~i 355 (538)
T KOG1235|consen 322 ---FFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVI 355 (538)
T ss_pred ---CccCCCCCCcEEEecCCCCCccEEEEcccccccc
Confidence 999999999999984 678999999998765
|
|
| >cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00052 Score=72.37 Aligned_cols=75 Identities=21% Similarity=0.218 Sum_probs=50.1
Q ss_pred eeEEeecCceEEEEEEecC--CCEEEEEEeecccccchHHHHHHHHHHhhccCCcee-eEeeeeecCCceEEEEeeccCC
Q 002647 504 SRIIGEGGFGVVYRGILDD--GREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLV-KLFGVCIEDNNRCLVYELIHNG 580 (897)
Q Consensus 504 ~~~LG~G~fGtVyka~l~~--g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV-~Llg~~~~~~~~~LV~Ey~~gG 580 (897)
.+.|..|-...+|+....+ +..|++|+....... .-+..+|+.+++.+...+++ ++++.+. ..+||||++|.
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~-~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i~G~ 77 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL-IIDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFIPGR 77 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc-eecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEeeCCC
Confidence 3567788889999998764 678999976543221 12345799999988654443 3433322 24899999987
Q ss_pred ccc
Q 002647 581 SLE 583 (897)
Q Consensus 581 SL~ 583 (897)
++.
T Consensus 78 ~l~ 80 (235)
T cd05157 78 TLE 80 (235)
T ss_pred cCC
Confidence 763
|
ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo |
| >COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00026 Score=72.50 Aligned_cols=129 Identities=22% Similarity=0.207 Sum_probs=86.8
Q ss_pred eeeEEeecCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccCCcc
Q 002647 503 TSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSL 582 (897)
Q Consensus 503 ~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~gGSL 582 (897)
..+.|++|.+|.||+|.+. |..+|+|+-+.... ...+..|+++|..+.-.++-+=+-++- .-++.|||+.|-.|
T Consensus 26 v~~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~ds~--r~~l~kEakiLeil~g~~~~p~vy~yg---~~~i~me~i~G~~L 99 (201)
T COG2112 26 VEKELAKGTTSVVYLGEWR-GGEVALKVRRRDSP--RRNLEKEAKILEILAGEGVTPEVYFYG---EDFIRMEYIDGRPL 99 (201)
T ss_pred hhhhhhcccccEEEEeecc-CceEEEEEecCCcc--hhhHHHHHHHHHHhhhcCCCceEEEec---hhhhhhhhhcCcch
Confidence 4578999999999999998 66899998765433 478999999999998777654332222 22455999998788
Q ss_pred ccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCC-CCcEEEccCCceEEeccCcchh
Q 002647 583 ESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFK-SSNILLEHDFTPKVSDFGLART 651 (897)
Q Consensus 583 ~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIK-psNILLd~~~~vKLsDFGLAr~ 651 (897)
.++-.. .+-... ..+++.---|-..| |-|+.|. |..++|..+..+.|+||.-|..
T Consensus 100 ~~~~~~-------~~rk~l----~~vlE~a~~LD~~G---I~H~El~~~~k~vlv~~~~~~iIDFd~At~ 155 (201)
T COG2112 100 GKLEIG-------GDRKHL----LRVLEKAYKLDRLG---IEHGELSRPWKNVLVNDRDVYIIDFDSATF 155 (201)
T ss_pred hhhhhc-------ccHHHH----HHHHHHHHHHHHhc---cchhhhcCCceeEEecCCcEEEEEccchhh
Confidence 765421 122233 33344423333334 8888886 4444444455999999998863
|
|
| >PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00082 Score=70.43 Aligned_cols=131 Identities=24% Similarity=0.357 Sum_probs=92.6
Q ss_pred eeEEeecCceEEEEEEecCCCEEEEEEeeccc----------------ccchHHHHHHHHHHhhcc------CCceeeEe
Q 002647 504 SRIIGEGGFGVVYRGILDDGREVAVKVLKRAN----------------QHGGREFLAELEMLSRLH------HRNLVKLF 561 (897)
Q Consensus 504 ~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~----------------~~~~~~f~~Ev~iL~~L~------HpNIV~Ll 561 (897)
...||+|+.-.||. +.+.....||+..... ....+++.+|+....++. +.+|.+++
T Consensus 6 ~~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~ 83 (199)
T PF10707_consen 6 SDLIAQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY 83 (199)
T ss_pred CcccccCCCceEEE--CCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence 35799999999986 4445667888887554 223467888888877776 78899999
Q ss_pred eeeecCCceEEEEeeccC--C----ccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEE
Q 002647 562 GVCIEDNNRCLVYELIHN--G----SLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILL 635 (897)
Q Consensus 562 g~~~~~~~~~LV~Ey~~g--G----SL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILL 635 (897)
|+...+...-+|+|.+.+ | +|.+++. .+.++. ...+.+.++ .+||-++. |+.+|++|.||++
T Consensus 84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~-----~~~~~~-~~~~~L~~f---~~~l~~~~---Iv~~dl~~~NIv~ 151 (199)
T PF10707_consen 84 GFVETNLGLGLVVELIRDADGNISPTLEDYLK-----EGGLTE-ELRQALDEF---KRYLLDHH---IVIRDLNPHNIVV 151 (199)
T ss_pred EEEecCCceEEEEEEEECCCCCcCccHHHHHH-----cCCccH-HHHHHHHHH---HHHHHHcC---CeecCCCcccEEE
Confidence 999999888999998753 3 4666663 233555 444444444 45555555 9999999999999
Q ss_pred ccCC----ceEEec-cCc
Q 002647 636 EHDF----TPKVSD-FGL 648 (897)
Q Consensus 636 d~~~----~vKLsD-FGL 648 (897)
..+. .+.|+| ||.
T Consensus 152 ~~~~~~~~~lvlIDG~G~ 169 (199)
T PF10707_consen 152 QRRDSGEFRLVLIDGLGE 169 (199)
T ss_pred EecCCCceEEEEEeCCCC
Confidence 5432 466666 443
|
PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner []. |
| >TIGR02721 ycfN_thiK thiamine kinase | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00074 Score=72.58 Aligned_cols=139 Identities=19% Similarity=0.176 Sum_probs=80.2
Q ss_pred EeecCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhccCCcee-eEeeeeecCCceEEEEeeccCCccccc
Q 002647 507 IGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLV-KLFGVCIEDNNRCLVYELIHNGSLESH 585 (897)
Q Consensus 507 LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV-~Llg~~~~~~~~~LV~Ey~~gGSL~~~ 585 (897)
+..|-...+|+... ++..+++|........-.-+..+|.++++.+....++ ++++.+ .-++||||++|..+...
T Consensus 4 ~~~G~tn~~y~~~~-~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~----~~~~v~e~i~G~~~~~~ 78 (256)
T TIGR02721 4 LSGGLTNRSWRIEH-PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVN----EHWLLVEWLEGEVITLD 78 (256)
T ss_pred CCCcCcCCeEEEEe-CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEe----CCEEEEEeccCcccccc
Confidence 45677788998874 4677888876543222112457899999998654443 333332 13689999998776532
Q ss_pred -----------------cccCCCCCCCCCHHHHH-HHHHHH---------HHHHhhhhcc-----CCCcEEecCCCCCcE
Q 002647 586 -----------------LHGDDKVNGPLDWDARM-KIALGA---------ARGLAYLHED-----SSPRVIHRDFKSSNI 633 (897)
Q Consensus 586 -----------------L~~~~~~~~~Ls~~~rl-~Ia~qI---------a~gL~YLH~~-----gsp~IIHrDIKpsNI 633 (897)
||.......+++...++ .+..++ .+.+..+-.. ....++|+|+.+.||
T Consensus 79 ~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Ni 158 (256)
T TIGR02721 79 QFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNL 158 (256)
T ss_pred cccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCcE
Confidence 22221111222222111 111111 1111111111 124599999999999
Q ss_pred EEccCCceEEeccCcchh
Q 002647 634 LLEHDFTPKVSDFGLART 651 (897)
Q Consensus 634 LLd~~~~vKLsDFGLAr~ 651 (897)
|+++++ ++|+||..+..
T Consensus 159 l~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 159 VVTPQG-LKLIDWEYASD 175 (256)
T ss_pred EEeCCC-CEEEeccccCc
Confidence 999876 78999988753
|
Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function. |
| >cd05153 HomoserineK_II Homoserine Kinase, type II | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00082 Score=73.51 Aligned_cols=143 Identities=21% Similarity=0.174 Sum_probs=86.2
Q ss_pred eeEEeecCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhccCCc--eeeEeee------eecCCceEEEEe
Q 002647 504 SRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRN--LVKLFGV------CIEDNNRCLVYE 575 (897)
Q Consensus 504 ~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpN--IV~Llg~------~~~~~~~~LV~E 575 (897)
.+.|..|....+|+....+ ..+++|+... ....+...|++++..|.+.+ +.+++.. ....+..++|++
T Consensus 19 i~~i~~G~~n~~y~v~~~~-~~~vLr~~~~---~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~ 94 (296)
T cd05153 19 FEGISAGIENTNYFVTTDS-GRYVLTLFEK---VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVE 94 (296)
T ss_pred eecccCccccceEEEEeCC-CcEEEEEcCC---CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEE
Confidence 4567778778999987654 4688898764 23356778888888885443 3344332 122345689999
Q ss_pred eccCCccccc--------------cccCC----C---CCCCCCHHHHHH----------HHHHHHHHHhhhhc----cCC
Q 002647 576 LIHNGSLESH--------------LHGDD----K---VNGPLDWDARMK----------IALGAARGLAYLHE----DSS 620 (897)
Q Consensus 576 y~~gGSL~~~--------------L~~~~----~---~~~~Ls~~~rl~----------Ia~qIa~gL~YLH~----~gs 620 (897)
|++|..+... ||... . ......|..... ....+.+.+.++.+ ...
T Consensus 95 ~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~ 174 (296)
T cd05153 95 FLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLP 174 (296)
T ss_pred eCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCC
Confidence 9998776431 11100 0 001122222110 11113334444443 112
Q ss_pred CcEEecCCCCCcEEEccCCceEEeccCcch
Q 002647 621 PRVIHRDFKSSNILLEHDFTPKVSDFGLAR 650 (897)
Q Consensus 621 p~IIHrDIKpsNILLd~~~~vKLsDFGLAr 650 (897)
..++|+|+.+.|||++++..+.|.||+.+.
T Consensus 175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~ 204 (296)
T cd05153 175 RGVIHADLFRDNVLFDGDELSGVIDFYFAC 204 (296)
T ss_pred CcCCccCcCcccEEEeCCceEEEeehhhhc
Confidence 359999999999999998778999998775
|
Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine. |
| >PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2 | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0014 Score=68.73 Aligned_cols=125 Identities=26% Similarity=0.402 Sum_probs=89.0
Q ss_pred CCceeeeEEeecCc-eEEEEEEecCCCEEEEEEeeccc--------------c-------cchHHHHHHHHHHhhcc---
Q 002647 499 NGFHTSRIIGEGGF-GVVYRGILDDGREVAVKVLKRAN--------------Q-------HGGREFLAELEMLSRLH--- 553 (897)
Q Consensus 499 ~~y~~~~~LG~G~f-GtVyka~l~~g~~VAVK~lk~~~--------------~-------~~~~~f~~Ev~iL~~L~--- 553 (897)
.+++..+.||.|.- |.|||+... |+.+|+|.++... . .....|..|.....+|+
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I~-g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~ 115 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEID-GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG 115 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEEC-CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence 67888999999999 999999997 7899999943210 0 11235778888888775
Q ss_pred CCce--eeEeeeeecC------------------CceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHh
Q 002647 554 HRNL--VKLFGVCIED------------------NNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLA 613 (897)
Q Consensus 554 HpNI--V~Llg~~~~~------------------~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~ 613 (897)
+.++ |+.+||..-. ..+.||.||++... .+... -+.++.+-|.
T Consensus 116 ~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-------------~~~~~----~~~~~~~dl~ 178 (207)
T PF13095_consen 116 REGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-------------PLQIR----DIPQMLRDLK 178 (207)
T ss_pred ccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-------------ccchh----HHHHHHHHHH
Confidence 4556 8999987322 11246777665422 12333 3455667788
Q ss_pred hhhccCCCcEEecCCCCCcEEEccCCceEEeccCcc
Q 002647 614 YLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLA 649 (897)
Q Consensus 614 YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLA 649 (897)
.+|..+ |+-+|+++.|.. .-||+|||.+
T Consensus 179 ~~~k~g---I~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 179 ILHKLG---IVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HHHHCC---eeeccCcccccc-----CCEEEecccC
Confidence 999988 999999999986 4589999864
|
|
| >PRK05231 homoserine kinase; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0031 Score=69.94 Aligned_cols=157 Identities=17% Similarity=0.179 Sum_probs=83.8
Q ss_pred cHHHHHHhhCCcee-----eeEEeecCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhccCCc--eeeEee
Q 002647 490 TLNDIEKATNGFHT-----SRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRN--LVKLFG 562 (897)
Q Consensus 490 ~~~ei~~at~~y~~-----~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpN--IV~Llg 562 (897)
+.+++......|.+ .+.|+.|....+|+....+| .+++|+.... ..+....|++++..|...+ +.+.+.
T Consensus 8 s~~~l~~~l~~y~~~~~~~~~~l~~G~~n~~y~v~t~~g-~~vLK~~~~~---~~~~l~~~~~~l~~L~~~glpvP~~i~ 83 (319)
T PRK05231 8 SDDELAAFLAPYDLGELLSLKGIAEGIENSNFFLTTTQG-EYVLTLFERL---TAEDLPFFLGLMQHLAARGVPVPAPVA 83 (319)
T ss_pred CHHHHHHHHHhcCCchhhccchhccccccceEEEEeCCC-cEEEEEeccC---ChHHhHHHHHHHHHHHHCCCCCCccee
Confidence 34444444344433 34566777789999887655 6888987621 2244455666666664222 222221
Q ss_pred e------eecCCceEEEEeeccCCccccc--------------cccCCC-------CCCCCCH-HHHHH-----------
Q 002647 563 V------CIEDNNRCLVYELIHNGSLESH--------------LHGDDK-------VNGPLDW-DARMK----------- 603 (897)
Q Consensus 563 ~------~~~~~~~~LV~Ey~~gGSL~~~--------------L~~~~~-------~~~~Ls~-~~rl~----------- 603 (897)
. ....+..++++||++|..+... ||.... ....+.| .....
T Consensus 84 ~~~G~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (319)
T PRK05231 84 RRDGAALGELAGKPAAIVTFLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQA 163 (319)
T ss_pred CCCCCEeeeeCCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHH
Confidence 1 1223456899999998754211 111100 0011212 11111
Q ss_pred -HHHH-HHHHHhhhhcc----CCCcEEecCCCCCcEEEccCCceEEeccCcch
Q 002647 604 -IALG-AARGLAYLHED----SSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR 650 (897)
Q Consensus 604 -Ia~q-Ia~gL~YLH~~----gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr 650 (897)
.+.+ +...++.+... -...+||+|+.+.|||++.+...-|+||+.+.
T Consensus 164 ~~l~~~~~~~~~~~~~~~~~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~ 216 (319)
T PRK05231 164 ALLEAELAAQLAFLASAAWPALPRGVIHADLFRDNVLFEGDRLSGFIDFYFAC 216 (319)
T ss_pred HHHHHHHHHHHHhhhccccccCCcccCCCCCCCCcEEEECCceEEEEeccccc
Confidence 1111 11122333211 13359999999999999977656899999875
|
|
| >PRK09550 mtnK methylthioribose kinase; Reviewed | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0036 Score=72.20 Aligned_cols=76 Identities=21% Similarity=0.216 Sum_probs=53.8
Q ss_pred eeEEeecCceEEEEEEecCC-CEEEEEEeecc-----c--ccchHHHHHHHHHHhhcc---CCceeeEeeeeecCCceEE
Q 002647 504 SRIIGEGGFGVVYRGILDDG-REVAVKVLKRA-----N--QHGGREFLAELEMLSRLH---HRNLVKLFGVCIEDNNRCL 572 (897)
Q Consensus 504 ~~~LG~G~fGtVyka~l~~g-~~VAVK~lk~~-----~--~~~~~~f~~Ev~iL~~L~---HpNIV~Llg~~~~~~~~~L 572 (897)
.+.||.|.+..||++...+| +.|+||.-... . ....+.+..|.+.|..+. -.++.+++.+ +.+..++
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~l 108 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVT 108 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEE
Confidence 36799999999999998877 48999985311 1 123456778888888863 2345566655 3355789
Q ss_pred EEeeccCCc
Q 002647 573 VYELIHNGS 581 (897)
Q Consensus 573 V~Ey~~gGS 581 (897)
||||+++..
T Consensus 109 VME~L~~~~ 117 (401)
T PRK09550 109 VMEDLSDHK 117 (401)
T ss_pred EEecCCCcc
Confidence 999998743
|
|
| >TIGR00938 thrB_alt homoserine kinase, Neisseria type | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0088 Score=66.17 Aligned_cols=144 Identities=22% Similarity=0.231 Sum_probs=82.6
Q ss_pred eeEEeecCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhccCCc--eeeEeeee------ecCCceEEEEe
Q 002647 504 SRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRN--LVKLFGVC------IEDNNRCLVYE 575 (897)
Q Consensus 504 ~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpN--IV~Llg~~------~~~~~~~LV~E 575 (897)
.+.++.|-...+|+....+| .+++|+..... ..++...|++++..|.... +.+++... ...+..++++|
T Consensus 27 i~~~~~G~~n~~y~v~t~~~-~~vLK~~~~~~--~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e 103 (307)
T TIGR00938 27 LKGIAEGVENSNYLLTTDVG-RYILTLYEKRV--KAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVE 103 (307)
T ss_pred ccccCCccccceEEEEeCCC-cEEEEEecCCC--CHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEE
Confidence 45567777789999876655 57788765421 1245567778887775322 33333321 12345689999
Q ss_pred eccCCccccc--------------cccCCCC---C--C---CCCHHHHH------------HHHHHHHHHHhhhhc----
Q 002647 576 LIHNGSLESH--------------LHGDDKV---N--G---PLDWDARM------------KIALGAARGLAYLHE---- 617 (897)
Q Consensus 576 y~~gGSL~~~--------------L~~~~~~---~--~---~Ls~~~rl------------~Ia~qIa~gL~YLH~---- 617 (897)
|++|..+... +|..... . . .-.|.... .....+.+.++++..
T Consensus 104 ~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~ 183 (307)
T TIGR00938 104 FLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWPR 183 (307)
T ss_pred eCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhhh
Confidence 9998654311 1211000 0 0 01121110 001123334555532
Q ss_pred cCCCcEEecCCCCCcEEEccCCceEEeccCcch
Q 002647 618 DSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR 650 (897)
Q Consensus 618 ~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr 650 (897)
.....++|+|+.+.||++++++.+.|+||+.+.
T Consensus 184 ~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 184 DLPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC 216 (307)
T ss_pred cCCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence 123469999999999999998877899998864
|
Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase. |
| >cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.006 Score=67.08 Aligned_cols=141 Identities=28% Similarity=0.321 Sum_probs=84.3
Q ss_pred eEEeecCceEEEEEEecC-------CCEEEEEEeecccccchHHHHHHHHHHhhccCCcee-eEeeeeecCCceEEEEee
Q 002647 505 RIIGEGGFGVVYRGILDD-------GREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLV-KLFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~~-------g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV-~Llg~~~~~~~~~LV~Ey 576 (897)
+.|..|-...+|+....+ ++.+++|+...... ...+..+|.+++..+...++. ++++++. + .+|+||
T Consensus 4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~r~~E~~~~~~l~~~g~~P~~~~~~~-~---~~v~e~ 78 (302)
T cd05156 4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVE-LLIDRERELVVFARLSERNLGPKLYGIFP-N---GRIEEF 78 (302)
T ss_pred EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCc-ceechHHHHHHHHHHHhCCCCCceEEEeC-C---Cchhhe
Confidence 456667777999998765 57899998654332 224567898899888654443 4444443 2 368999
Q ss_pred ccCCccccc-----------------cccCCCCC-------CCCCHHHHHH--------------------------HHH
Q 002647 577 IHNGSLESH-----------------LHGDDKVN-------GPLDWDARMK--------------------------IAL 606 (897)
Q Consensus 577 ~~gGSL~~~-----------------L~~~~~~~-------~~Ls~~~rl~--------------------------Ia~ 606 (897)
++|..+... ||...... ...-|....+ +..
T Consensus 79 i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (302)
T cd05156 79 IPSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLFLE 158 (302)
T ss_pred eCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHHHH
Confidence 998776531 12111110 0011111111 111
Q ss_pred HHHHHHhhhhc------cCCCcEEecCCCCCcEEEccC----CceEEeccCcch
Q 002647 607 GAARGLAYLHE------DSSPRVIHRDFKSSNILLEHD----FTPKVSDFGLAR 650 (897)
Q Consensus 607 qIa~gL~YLH~------~gsp~IIHrDIKpsNILLd~~----~~vKLsDFGLAr 650 (897)
.+..-+.+|-. .....++|+|+.+.|||++++ +.++|+||..+.
T Consensus 159 ~~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~ 212 (302)
T cd05156 159 DEAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS 212 (302)
T ss_pred HHHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence 22222334432 134569999999999999985 889999998875
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0014 Score=82.10 Aligned_cols=196 Identities=21% Similarity=0.202 Sum_probs=132.4
Q ss_pred HHHHHHHHhhccCCceeeEeeeeecCCce----EEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhc
Q 002647 542 FLAELEMLSRLHHRNLVKLFGVCIEDNNR----CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHE 617 (897)
Q Consensus 542 f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~----~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~ 617 (897)
...|.+.+.++.|.|++.++.|-.++... .+..|++..-++...+. ....++..+.+.+..++.+||+|+|.
T Consensus 229 ~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q----~v~~i~~~~~r~~~~~~~~GL~~~h~ 304 (1351)
T KOG1035|consen 229 TEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQ----SVGSIPLETLRILHQKLLEGLAYLHS 304 (1351)
T ss_pred HHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHh----hccccCHHHHHHHHHHHhhhHHHHHH
Confidence 44577888899999999999987765433 24457777777777773 34568889999999999999999998
Q ss_pred cCCCcEEecCCCCC---cEEEccCCceEEe--ccCcchhcccCCCcccccccccccccCChhhhhcCCCCc--cccEEec
Q 002647 618 DSSPRVIHRDFKSS---NILLEHDFTPKVS--DFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLV--KSDVYSY 690 (897)
Q Consensus 618 ~gsp~IIHrDIKps---NILLd~~~~vKLs--DFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~--kSDVwSf 690 (897)
.. ..|.-+..+ +-..+.++.+.++ ||+..+...+.... ....-+..|.++|......+.. ..|+|.+
T Consensus 305 ~~---l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~---~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~l 378 (1351)
T KOG1035|consen 305 LS---LEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKS---FSDLLAEIRNADEDLKENTAKKSRLTDLWCL 378 (1351)
T ss_pred hc---cceeEEecccccccccCccceeecchhhhcccccCCCcccc---hhhcCccccccccccccccchhhhhhHHHHH
Confidence 74 556555555 5555677777777 88887755332221 1223345677888776665544 4799999
Q ss_pred hhHHHHHHhCCCCCCCCCCCCchhhHHhhhhcccccccccccccchhccCCCHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 002647 691 GVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEV 770 (897)
Q Consensus 691 GvIL~ELlTGk~Pfd~~~~~~~~~lv~w~~~l~~~~e~l~~iiDp~l~~~~~~e~~~~L~~Li~~CL~~dP~~RPTm~EV 770 (897)
|..+..+..|...-.... ....+++. .....+.+....|+..+.++|....++
T Consensus 379 gll~~~~~~~~~i~~~~~-------------------~~~~~l~~--------~~~~~~~d~~~~~~~~~~~~Rl~~~~l 431 (1351)
T KOG1035|consen 379 GLLLLQLSQGEDISEKSA-------------------VPVSLLDV--------LSTSELLDALPKCLDEDSEERLSALEL 431 (1351)
T ss_pred HHHHhhhhhcCccccccc-------------------chhhhhcc--------ccchhhhhhhhhhcchhhhhccchhhh
Confidence 999999998776432110 00111110 000134566778888889999988888
Q ss_pred HHHH
Q 002647 771 VQAL 774 (897)
Q Consensus 771 l~~L 774 (897)
+...
T Consensus 432 l~~~ 435 (1351)
T KOG1035|consen 432 LTHP 435 (1351)
T ss_pred hhch
Confidence 7654
|
|
| >PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein [] | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.013 Score=64.88 Aligned_cols=76 Identities=25% Similarity=0.278 Sum_probs=48.9
Q ss_pred ceeeeEEeecCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhcc---CCceeeEeeeeecCCceEEEEeec
Q 002647 501 FHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLH---HRNLVKLFGVCIEDNNRCLVYELI 577 (897)
Q Consensus 501 y~~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~---HpNIV~Llg~~~~~~~~~LV~Ey~ 577 (897)
....+.|+-|....+|+.. .+++.+.||.-.. .....|..|.+-|+.|. --.+.+.+++....+..+||+||+
T Consensus 19 i~~~~~v~GG~i~~a~~~~-~~~~~~FvK~~~~---~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l 94 (288)
T PF03881_consen 19 ITSIEPVSGGDINEAYRLD-TDGGSYFVKVNSE---SGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFL 94 (288)
T ss_dssp --EEEEE--SSSSEEEEEE-TTS-EEEEEEEEG---GGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE--
T ss_pred eeeeEecCCCChhheEEEE-CCCccEEEEecCh---hhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEee
Confidence 3445778989999999988 5578899998762 23367889999988884 345667888877777779999999
Q ss_pred cCC
Q 002647 578 HNG 580 (897)
Q Consensus 578 ~gG 580 (897)
+.+
T Consensus 95 ~~~ 97 (288)
T PF03881_consen 95 EMG 97 (288)
T ss_dssp ---
T ss_pred cCC
Confidence 876
|
Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A. |
| >cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2') | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.023 Score=62.48 Aligned_cols=31 Identities=23% Similarity=0.452 Sum_probs=25.9
Q ss_pred CcEEecCCCCCcEEEccCCc-eEEeccCcchh
Q 002647 621 PRVIHRDFKSSNILLEHDFT-PKVSDFGLART 651 (897)
Q Consensus 621 p~IIHrDIKpsNILLd~~~~-vKLsDFGLAr~ 651 (897)
+.++|+|+++.|||+++++. .-|.||+.+..
T Consensus 185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i 216 (276)
T cd05152 185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKV 216 (276)
T ss_pred CeeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence 45999999999999997555 56999998764
|
MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported |
| >KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.00026 Score=89.87 Aligned_cols=161 Identities=12% Similarity=-0.004 Sum_probs=117.3
Q ss_pred HHHHHHHHhhccCCceeeEeeeee--cCCceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccC
Q 002647 542 FLAELEMLSRLHHRNLVKLFGVCI--EDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDS 619 (897)
Q Consensus 542 f~~Ev~iL~~L~HpNIV~Llg~~~--~~~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~g 619 (897)
...|.+-++...|+++.....-.. +..+.+.+++|+..|.+.+.|.+..++...++..-+...-.+...+..-+|...
T Consensus 1276 ll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~t 1355 (2724)
T KOG1826|consen 1276 LLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLT 1355 (2724)
T ss_pred hhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcc
Confidence 344555566678888876554332 234668999999999999999766555555655555444444355555555432
Q ss_pred --CCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcccccccccccccCChhhhhcCCCCccccEEechhHHHHH
Q 002647 620 --SPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLEL 697 (897)
Q Consensus 620 --sp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~~~t~~~GT~~Y~APE~l~~~~~t~kSDVwSfGvIL~EL 697 (897)
..-.+|+++|+-|.+|+.+..+|++++|+.+.. ...........+++.|+.++....-.++.++|+|..|+.+|++
T Consensus 1356 nlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIk--np~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~r 1433 (2724)
T KOG1826|consen 1356 NLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIK--NPVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLR 1433 (2724)
T ss_pred cCCccchhhhhhhhccceecCCccccccccccccc--CchHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 234789999999999999999999999999832 1222233445678899999998888999999999999999999
Q ss_pred HhCCCCC
Q 002647 698 LTGRKPV 704 (897)
Q Consensus 698 lTGk~Pf 704 (897)
.-|..+|
T Consensus 1434 s~~n~~f 1440 (2724)
T KOG1826|consen 1434 SDGNAYF 1440 (2724)
T ss_pred hcccHHH
Confidence 8887765
|
|
| >PLN02236 choline kinase | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.063 Score=60.86 Aligned_cols=141 Identities=19% Similarity=0.212 Sum_probs=81.7
Q ss_pred eEEeecCceEEEEEEecC-----CCEEEEEEeecccccchHHHHHHHHHHhhccCCcee-eEeeeeecCCceEEEEeecc
Q 002647 505 RIIGEGGFGVVYRGILDD-----GREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLV-KLFGVCIEDNNRCLVYELIH 578 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~~-----g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV-~Llg~~~~~~~~~LV~Ey~~ 578 (897)
+.|-.|-.-.+|++...+ ++.|++|+......... +-.+|..+++.+...++- ++++.+..+ .|+||++
T Consensus 42 ~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~i-dR~~E~~~~~~l~~~gl~P~~~~~~~~g----~v~efi~ 116 (344)
T PLN02236 42 IPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFF-DRDDEIRTFECMSRHGQGPRLLGRFPNG----RVEEFIH 116 (344)
T ss_pred EEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeee-chHHHHHHHHHHHHcCCCCceEEEECCc----eEEEeeC
Confidence 445457777899987542 36788888765433222 236799999988655554 455555322 5899998
Q ss_pred CCccccc-----------------cccCCCCCC--CCCHHHHHHHHHHH-----------------HHHHhh----hhc-
Q 002647 579 NGSLESH-----------------LHGDDKVNG--PLDWDARMKIALGA-----------------ARGLAY----LHE- 617 (897)
Q Consensus 579 gGSL~~~-----------------L~~~~~~~~--~Ls~~~rl~Ia~qI-----------------a~gL~Y----LH~- 617 (897)
+.+|... ||....... ..-|....++..++ ...+.. +..
T Consensus 117 g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~ 196 (344)
T PLN02236 117 ARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGD 196 (344)
T ss_pred CCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhccc
Confidence 7666421 222111111 11233332332211 111111 111
Q ss_pred cCCCcEEecCCCCCcEEEcc-CCceEEeccCcch
Q 002647 618 DSSPRVIHRDFKSSNILLEH-DFTPKVSDFGLAR 650 (897)
Q Consensus 618 ~gsp~IIHrDIKpsNILLd~-~~~vKLsDFGLAr 650 (897)
.....++|+|+++.|||+++ ++.++|+||..+.
T Consensus 197 ~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~ 230 (344)
T PLN02236 197 DQEIGFCHNDLQYGNIMIDEETRAITIIDYEYAS 230 (344)
T ss_pred CCCceEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence 12346999999999999986 4789999998875
|
|
| >KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.0054 Score=68.27 Aligned_cols=132 Identities=22% Similarity=0.247 Sum_probs=91.3
Q ss_pred ceeeeEEeecCceEEEEEEecCCCEEEEEEeec----------cc-------c-c----chHHHHHHHHHHhhccCC--c
Q 002647 501 FHTSRIIGEGGFGVVYRGILDDGREVAVKVLKR----------AN-------Q-H----GGREFLAELEMLSRLHHR--N 556 (897)
Q Consensus 501 y~~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~----------~~-------~-~----~~~~f~~Ev~iL~~L~Hp--N 556 (897)
+.+.+.||-|--+-||.+...+|++.++|.=+- .. . . ..-...+|+..|+.|... -
T Consensus 94 ~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gfp 173 (465)
T KOG2268|consen 94 ESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGFP 173 (465)
T ss_pred hhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCCC
Confidence 567899999999999999999999999986311 00 0 0 012345788888888532 2
Q ss_pred eeeEeeeeecCCceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEc
Q 002647 557 LVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLE 636 (897)
Q Consensus 557 IV~Llg~~~~~~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd 636 (897)
+.+.+++ +..++|||++.+-.|...-+ ..+..++..-++ .-+--|..+| +||+|+.-=||+++
T Consensus 174 VPkpiD~----~RH~Vvmelv~g~Pl~~v~~-------v~d~~~ly~~lm---~~Iv~la~~G---lIHgDFNEFNimv~ 236 (465)
T KOG2268|consen 174 VPKPIDH----NRHCVVMELVDGYPLRQVRH-------VEDPPTLYDDLM---GLIVRLANHG---LIHGDFNEFNIMVK 236 (465)
T ss_pred CCCcccc----cceeeHHHhhcccceeeeee-------cCChHHHHHHHH---HHHHHHHHcC---ceecccchheeEEe
Confidence 3344443 45689999999988875542 123333333333 3344555666 99999999999999
Q ss_pred cCCceEEeccCcc
Q 002647 637 HDFTPKVSDFGLA 649 (897)
Q Consensus 637 ~~~~vKLsDFGLA 649 (897)
+++.++++||--.
T Consensus 237 dd~~i~vIDFPQm 249 (465)
T KOG2268|consen 237 DDDKIVVIDFPQM 249 (465)
T ss_pred cCCCEEEeechHh
Confidence 9999999999544
|
|
| >COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.058 Score=60.60 Aligned_cols=127 Identities=21% Similarity=0.280 Sum_probs=79.5
Q ss_pred EEEEEEecCCCEEEEEEee--cccccchHHHHHHHHHHhhccC--CceeeEeeeeecCC--ceEEEEeeccCCccccccc
Q 002647 514 VVYRGILDDGREVAVKVLK--RANQHGGREFLAELEMLSRLHH--RNLVKLFGVCIEDN--NRCLVYELIHNGSLESHLH 587 (897)
Q Consensus 514 tVyka~l~~g~~VAVK~lk--~~~~~~~~~f~~Ev~iL~~L~H--pNIV~Llg~~~~~~--~~~LV~Ey~~gGSL~~~L~ 587 (897)
.+|..... ++.+++. .- ...........+|+.+|+.+.- --+-..+++|.++. ..+.||+|++|..+.+.+.
T Consensus 40 ~t~~~~~~-~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~~~~~~ 117 (321)
T COG3173 40 DTFRLGDT-GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVVWSALP 117 (321)
T ss_pred ceEEEecC-CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecceeccCcCC
Confidence 34444433 6677777 22 1112223456678888887743 22344566776665 5699999999866555442
Q ss_pred cCCCCCCCCCHHHHHHHH-HHHHHHHhhhhcc------------------------------------------------
Q 002647 588 GDDKVNGPLDWDARMKIA-LGAARGLAYLHED------------------------------------------------ 618 (897)
Q Consensus 588 ~~~~~~~~Ls~~~rl~Ia-~qIa~gL~YLH~~------------------------------------------------ 618 (897)
... .. .+++ ..+++.|+-||+-
T Consensus 118 ~~~-----~~----~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~Wl~ 188 (321)
T COG3173 118 PES-----LG----RQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLIKWLE 188 (321)
T ss_pred ccc-----ch----HHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHHHHHH
Confidence 110 11 1122 2555555555521
Q ss_pred -------CCCcEEecCCCCCcEEEccCCceEEeccCcchh
Q 002647 619 -------SSPRVIHRDFKSSNILLEHDFTPKVSDFGLART 651 (897)
Q Consensus 619 -------gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~ 651 (897)
+.+.++|+|+.+.||+++.+..+-|.||+++..
T Consensus 189 ~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~l 228 (321)
T COG3173 189 ANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATL 228 (321)
T ss_pred hcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEecccccc
Confidence 245699999999999999988899999999875
|
|
| >TIGR02906 spore_CotS spore coat protein, CotS family | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.067 Score=58.74 Aligned_cols=29 Identities=31% Similarity=0.414 Sum_probs=25.3
Q ss_pred CcEEecCCCCCcEEEccCCceEEeccCcch
Q 002647 621 PRVIHRDFKSSNILLEHDFTPKVSDFGLAR 650 (897)
Q Consensus 621 p~IIHrDIKpsNILLd~~~~vKLsDFGLAr 650 (897)
..++|+|+.+.|||++. +.+.|+||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~ 215 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCT 215 (313)
T ss_pred CceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence 45999999999999987 678999998764
|
Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers. |
| >COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.1 Score=58.94 Aligned_cols=137 Identities=23% Similarity=0.320 Sum_probs=81.5
Q ss_pred CceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhccCCce------eeEeee----eecCCceEEEEeeccCC
Q 002647 511 GFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNL------VKLFGV----CIEDNNRCLVYELIHNG 580 (897)
Q Consensus 511 ~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNI------V~Llg~----~~~~~~~~LV~Ey~~gG 580 (897)
.-..+|+....+|+. ++|+.... ....++..|++.|..|.-.++ ..+-|- .......+-+++|++|.
T Consensus 37 ~eN~~f~~~~~~g~~-iLki~~~~--~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~~l~G~ 113 (331)
T COG2334 37 EENSNFRVQTEDGRY-ILKIYRPG--WTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFEYLPGR 113 (331)
T ss_pred ccCceEEEEecCCCe-EEEEecCC--CCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEEecCCc
Confidence 445789998887776 88887765 344677788888888853332 222121 11112567899999998
Q ss_pred cccc-cc--------------c----cC----CCCCCCCCHHH-------------HHHHHHHHHHHHhhhhcc----CC
Q 002647 581 SLES-HL--------------H----GD----DKVNGPLDWDA-------------RMKIALGAARGLAYLHED----SS 620 (897)
Q Consensus 581 SL~~-~L--------------~----~~----~~~~~~Ls~~~-------------rl~Ia~qIa~gL~YLH~~----gs 620 (897)
.+.. .- | +. ......+.|.. ......++...++.+.+. -.
T Consensus 114 ~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~~~~lp 193 (331)
T COG2334 114 PLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARLPAHLP 193 (331)
T ss_pred CcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhhchhhCC
Confidence 8873 11 1 00 00111234430 111223333334444332 11
Q ss_pred ---CcEEecCCCCCcEEEccCCc-eEEeccCcch
Q 002647 621 ---PRVIHRDFKSSNILLEHDFT-PKVSDFGLAR 650 (897)
Q Consensus 621 ---p~IIHrDIKpsNILLd~~~~-vKLsDFGLAr 650 (897)
..+||+|+.+.|||++.+.. +.+.||+-+.
T Consensus 194 ~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~ 227 (331)
T COG2334 194 ALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAG 227 (331)
T ss_pred cccceeeecCCCccceeEcCCCCeeeEEEccccc
Confidence 22999999999999998885 8999999875
|
|
| >KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.086 Score=59.95 Aligned_cols=137 Identities=22% Similarity=0.247 Sum_probs=93.4
Q ss_pred eEEeecCceEEEEEEecCCCEEEEEEeeccc---------------------ccchH-----HHHHHHHHHhhccCCcee
Q 002647 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRAN---------------------QHGGR-----EFLAELEMLSRLHHRNLV 558 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~---------------------~~~~~-----~f~~Ev~iL~~L~HpNIV 558 (897)
..|..|--..||.|+-.+|..+|||+.+... ....+ -..+|+.-|.+|+.-.|.
T Consensus 150 GCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aGIP 229 (520)
T KOG2270|consen 150 GCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAGIP 229 (520)
T ss_pred cccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 4577888889999999999999999975311 00001 134578888887655432
Q ss_pred eEeeeeecCCceEEEEeeccCCccccccccCCCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccC
Q 002647 559 KLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHD 638 (897)
Q Consensus 559 ~Llg~~~~~~~~~LV~Ey~~gGSL~~~L~~~~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~ 638 (897)
-.--... ....|||+|+.. +=+-. .......|+...+..+-.|++.-|.-|.+.+ ++||.||.-=|+|+- +
T Consensus 230 ~PePIlL--k~hVLVM~FlGr-dgw~a---PkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c--~LVHADLSEfN~Lyh-d 300 (520)
T KOG2270|consen 230 CPEPILL--KNHVLVMEFLGR-DGWAA---PKLKDASLSTSKARELYQQCVRIMRRLYQKC--RLVHADLSEFNLLYH-D 300 (520)
T ss_pred CCCceee--ecceEeeeeccC-CCCcC---cccccccCChHHHHHHHHHHHHHHHHHHHHh--ceeccchhhhhheEE-C
Confidence 1111111 245799999953 21111 1122345777788888889999999998877 699999999999985 5
Q ss_pred CceEEeccCcch
Q 002647 639 FTPKVSDFGLAR 650 (897)
Q Consensus 639 ~~vKLsDFGLAr 650 (897)
|.+.|+|-+-+.
T Consensus 301 G~lyiIDVSQSV 312 (520)
T KOG2270|consen 301 GKLYIIDVSQSV 312 (520)
T ss_pred CEEEEEEccccc
Confidence 689999987664
|
|
| >PLN02756 S-methyl-5-thioribose kinase | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.18 Score=58.53 Aligned_cols=81 Identities=11% Similarity=0.113 Sum_probs=53.5
Q ss_pred eeeEEeecCceEEEEEEecCCCEEEEEEeec----ccc---cchHHHHHHHHHHhhcc---CCceeeEeeeeecCCceEE
Q 002647 503 TSRIIGEGGFGVVYRGILDDGREVAVKVLKR----ANQ---HGGREFLAELEMLSRLH---HRNLVKLFGVCIEDNNRCL 572 (897)
Q Consensus 503 ~~~~LG~G~fGtVyka~l~~g~~VAVK~lk~----~~~---~~~~~f~~Ev~iL~~L~---HpNIV~Llg~~~~~~~~~L 572 (897)
..+.||.|....||+.... +..++||+-.. ... .....-..|++.|+.+. -.++.+++.++. +..++
T Consensus 36 ~~~eiggGn~N~VyrV~~~-~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~vl 112 (418)
T PLN02756 36 KIKEVGDGNLNFVYIVVSS-SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMALI 112 (418)
T ss_pred eEEEcCCCceeeEEEEEcC-CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCEE
Confidence 3577899999999998875 55699998541 111 12334445677776664 246777888776 45688
Q ss_pred EEeeccCC--cccccc
Q 002647 573 VYELIHNG--SLESHL 586 (897)
Q Consensus 573 V~Ey~~gG--SL~~~L 586 (897)
+|||++++ .+.+.|
T Consensus 113 vME~L~~~~~ilr~~L 128 (418)
T PLN02756 113 GMRYLEPPHIILRKGL 128 (418)
T ss_pred EEeecCCcceehhhhh
Confidence 99999772 444443
|
|
| >PLN02421 phosphotransferase, alcohol group as acceptor/kinase | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.089 Score=59.24 Aligned_cols=141 Identities=19% Similarity=0.236 Sum_probs=79.9
Q ss_pred eEEeecCceEEEEEEecC----CCEEEEEEeecccccchHHHHHHHHHHhhccCCcee-eEeeeeecCCceEEEEeeccC
Q 002647 505 RIIGEGGFGVVYRGILDD----GREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLV-KLFGVCIEDNNRCLVYELIHN 579 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~~----g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV-~Llg~~~~~~~~~LV~Ey~~g 579 (897)
+.|..|=...+|+....+ +..|++|+....... .-+-.+|..+++.+..-++- ++++++. +. +|.+|+++
T Consensus 20 ~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~-~IdR~~E~~il~~l~~~gl~P~~l~~~~--~G--~i~~fi~g 94 (330)
T PLN02421 20 ERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDY-VIDRERELQAIKYLSAAGFGAKLLGVFG--NG--MIQSFINA 94 (330)
T ss_pred EEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCe-EechHHHHHHHHHHHhcCCCCceeEEeC--Cc--EeehhhcC
Confidence 445457777889887543 237888887643322 22346799999998766653 4555552 22 58999977
Q ss_pred Cccccc-----------------cccCCCCCC--CCCHHHHHHHHHHH----------------------HHHHh----h
Q 002647 580 GSLESH-----------------LHGDDKVNG--PLDWDARMKIALGA----------------------ARGLA----Y 614 (897)
Q Consensus 580 GSL~~~-----------------L~~~~~~~~--~Ls~~~rl~Ia~qI----------------------a~gL~----Y 614 (897)
..|... ||...-... .--|..+.++..++ ..-+. +
T Consensus 95 ~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 174 (330)
T PLN02421 95 RTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVELKEI 174 (330)
T ss_pred CCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHHHHHH
Confidence 655320 122111111 11233322222221 11111 1
Q ss_pred hhcc-CCCcEEecCCCCCcEEEcc-CCceEEeccCcch
Q 002647 615 LHED-SSPRVIHRDFKSSNILLEH-DFTPKVSDFGLAR 650 (897)
Q Consensus 615 LH~~-gsp~IIHrDIKpsNILLd~-~~~vKLsDFGLAr 650 (897)
+... ....++|.|+.+.|||+++ ++.++++||..|-
T Consensus 175 ~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag 212 (330)
T PLN02421 175 TDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGS 212 (330)
T ss_pred hccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccC
Confidence 1111 1235899999999999974 5789999998875
|
|
| >PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2 | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.042 Score=57.35 Aligned_cols=29 Identities=34% Similarity=0.470 Sum_probs=21.0
Q ss_pred cEEecCCCCCcEEE-ccCCceEEeccCcch
Q 002647 622 RVIHRDFKSSNILL-EHDFTPKVSDFGLAR 650 (897)
Q Consensus 622 ~IIHrDIKpsNILL-d~~~~vKLsDFGLAr 650 (897)
.++|+|+.+.|||+ +.++.++++||..|.
T Consensus 144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~ 173 (211)
T PF01633_consen 144 VFCHNDLNPGNILINNKDGEVKLIDFEYAG 173 (211)
T ss_dssp EEE-S--SGGGEEETSSSSCEEE--GTT-E
T ss_pred eEeeccCccccEEeccCCCeEEEecHHHHh
Confidence 48899999999999 889999999998875
|
7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B .... |
| >TIGR02904 spore_ysxE spore coat protein YsxE | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.16 Score=56.33 Aligned_cols=31 Identities=16% Similarity=0.180 Sum_probs=27.7
Q ss_pred CcEEecCCCCCcEEEccCCceEEeccCcchh
Q 002647 621 PRVIHRDFKSSNILLEHDFTPKVSDFGLART 651 (897)
Q Consensus 621 p~IIHrDIKpsNILLd~~~~vKLsDFGLAr~ 651 (897)
..++|+|+.+.|||++.++.+.|+||..+..
T Consensus 196 ~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 196 TVLVHGKLSLSHFLYDETRGGYFINFEKASF 226 (309)
T ss_pred eeeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence 3599999999999999999999999987763
|
Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat. |
| >TIGR01767 MTRK 5-methylthioribose kinase | Back alignment and domain information |
|---|
Probab=94.54 E-value=0.21 Score=57.09 Aligned_cols=74 Identities=19% Similarity=0.147 Sum_probs=47.5
Q ss_pred EEeecCceEEEEEEecCC-CEEEEEEeec----cc---ccchHHHHHHHHHHhhcc--CCceeeEeeeeecCCceEEEEe
Q 002647 506 IIGEGGFGVVYRGILDDG-REVAVKVLKR----AN---QHGGREFLAELEMLSRLH--HRNLVKLFGVCIEDNNRCLVYE 575 (897)
Q Consensus 506 ~LG~G~fGtVyka~l~~g-~~VAVK~lk~----~~---~~~~~~f~~Ev~iL~~L~--HpNIV~Llg~~~~~~~~~LV~E 575 (897)
.||.|-...||++...+| +.|+||.-.. .. ....+...-|.+.|+... -|..|+-+-+ .+++...+|||
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~-~D~e~~~~vME 80 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFH-FDTEMAVTVME 80 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEE-EccccceehHh
Confidence 478899999999997754 5899998532 11 223345556778887663 3544443322 33456679999
Q ss_pred eccCC
Q 002647 576 LIHNG 580 (897)
Q Consensus 576 y~~gG 580 (897)
+++..
T Consensus 81 dL~~~ 85 (370)
T TIGR01767 81 DLSHH 85 (370)
T ss_pred hCccc
Confidence 99653
|
This enzyme is involved in the methionine salvage pathway in certain bacteria. |
| >PRK11768 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=94.45 E-value=0.49 Score=53.14 Aligned_cols=72 Identities=18% Similarity=0.173 Sum_probs=45.9
Q ss_pred cCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhccCCc--eeeEe---e--eeecCCceEEEEeeccCCcc
Q 002647 510 GGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRN--LVKLF---G--VCIEDNNRCLVYELIHNGSL 582 (897)
Q Consensus 510 G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpN--IV~Ll---g--~~~~~~~~~LV~Ey~~gGSL 582 (897)
+.-..||+...++|..+++|+.+... ....++..|++.+..|.... ++..+ | +...++..+.++++++|..+
T Consensus 36 s~eN~vy~v~~~~~~~~vlKv~r~~~-~~~~~i~~E~~~l~~L~~~gipv~~p~~~~G~~~~~~~g~~~~l~~~~~G~~~ 114 (325)
T PRK11768 36 SYENRVYQFGDEDGRRVVAKFYRPER-WSDAQILEEHAFALELAEAEIPVVAPLAFNGQTLHEHQGFRFALFPRRGGRAP 114 (325)
T ss_pred cccceEEEEecCCCCEEEEEEcCccc-CCHHHHHHHHHHHHHHHHCCCCCCCCccCCCCEEEEECCEEEEEEeeeCCCCC
Confidence 34467999998888889999875332 24466778888888774322 22211 1 11223456789999987654
|
|
| >PTZ00384 choline kinase; Provisional | Back alignment and domain information |
|---|
Probab=94.12 E-value=0.45 Score=54.91 Aligned_cols=74 Identities=16% Similarity=0.169 Sum_probs=45.2
Q ss_pred eEEeecCceEEEEEEecCC--CE-----EEEEEeecccccchHHHHHHHHHHhhccCCceee-EeeeeecCCceEEEEee
Q 002647 505 RIIGEGGFGVVYRGILDDG--RE-----VAVKVLKRANQHGGREFLAELEMLSRLHHRNLVK-LFGVCIEDNNRCLVYEL 576 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~~g--~~-----VAVK~lk~~~~~~~~~f~~Ev~iL~~L~HpNIV~-Llg~~~~~~~~~LV~Ey 576 (897)
+.|..|=...+|++...++ .. |.++..... ....-+-.+|+++++.|...++-+ +++.+. -.+|+||
T Consensus 56 ~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~-~~l~IdR~~E~~i~~~Ls~~glgP~l~~~f~----~g~l~ef 130 (383)
T PTZ00384 56 KKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTY-NSLVIDNDLQYNIAKLLGDNNFGPKIIGRFG----DFTIQEW 130 (383)
T ss_pred EEeCCcccceEEEEEecCCCCCccccceEEEEeccCC-CceEeccHHHHHHHHHHHhCCCCCeEEEecC----CEEEEEE
Confidence 4555577889999986533 22 333332111 111123357899999997766654 455543 2599999
Q ss_pred ccCCccc
Q 002647 577 IHNGSLE 583 (897)
Q Consensus 577 ~~gGSL~ 583 (897)
++|.+|.
T Consensus 131 IeGr~l~ 137 (383)
T PTZ00384 131 VEGNTMG 137 (383)
T ss_pred eccccCC
Confidence 9987764
|
|
| >PRK06148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=93.58 E-value=0.54 Score=60.81 Aligned_cols=142 Identities=21% Similarity=0.237 Sum_probs=78.7
Q ss_pred eEEeecCceEEEEEEecCCCEEEEEEeecccccchHHHHHHHHHHhhcc-------CCceeeEe-e----eeec-CC--c
Q 002647 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLH-------HRNLVKLF-G----VCIE-DN--N 569 (897)
Q Consensus 505 ~~LG~G~fGtVyka~l~~g~~VAVK~lk~~~~~~~~~f~~Ev~iL~~L~-------HpNIV~Ll-g----~~~~-~~--~ 569 (897)
+.|+ |..-.+|+....+|..+++|+...... ......|.++|..|. -|.+++-. | .... ++ .
T Consensus 31 ~~L~-s~~d~nf~v~~~~g~~yVLKi~~~~~~--~~~~~~q~~~L~hL~~~~~glpvP~~i~t~~G~~~~~v~~~~G~~~ 107 (1013)
T PRK06148 31 TPLD-GERDLNFRLTTDDGADYILKIVNPSEP--RVESDFQTAALDHLAAVAPDLPVPRLIPSLSGASLASAQDPDGEPR 107 (1013)
T ss_pred eecC-CcCCceEEEEeCCCCeEEEEEcCCccc--hhHHHHHHHHHHHHHhhCCCCCcCeeeecCCCCeEEEeecCCCceE
Confidence 4564 456788999888888999999875432 233444555665442 33444322 1 1111 22 3
Q ss_pred eEEEEeeccCCccccccc-----------------c----C--CCCCCCCCHHH-----------------HHHHHHHHH
Q 002647 570 RCLVYELIHNGSLESHLH-----------------G----D--DKVNGPLDWDA-----------------RMKIALGAA 609 (897)
Q Consensus 570 ~~LV~Ey~~gGSL~~~L~-----------------~----~--~~~~~~Ls~~~-----------------rl~Ia~qIa 609 (897)
.+-+++|++|..|.+... . . ......+.|.. ...++.++.
T Consensus 108 ~vrLl~~l~G~~l~~~~~~t~~~~~~lG~~larlh~al~~F~~p~~~r~~~Wdl~~~~~l~~~l~~i~d~~~r~~l~~~~ 187 (1013)
T PRK06148 108 LLRLLSWLPGTPLAEAAPRTEALLDNLGRALGRLDRALQGFMHPGALRDLDWDLRHAGRARDRLHFIDDPEDRALVERFL 187 (1013)
T ss_pred EEEEEeccCCCcHHhccCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccccchhhhhhhhhcCCHHHHHHHHHHH
Confidence 567899999977755111 0 0 00011233321 112222222
Q ss_pred HHHh-----hhhccCCCcEEecCCCCCcEEEccCC--ceE-EeccCcch
Q 002647 610 RGLA-----YLHEDSSPRVIHRDFKSSNILLEHDF--TPK-VSDFGLAR 650 (897)
Q Consensus 610 ~gL~-----YLH~~gsp~IIHrDIKpsNILLd~~~--~vK-LsDFGLAr 650 (897)
+... .|.. -...+||+|+.+.|||++.+. ++. |+|||.+.
T Consensus 188 ~~~~~~v~p~l~~-Lp~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~ 235 (1013)
T PRK06148 188 ARFERNVAPRLAA-LPAQVIHNDANDYNILVDADDGERISGLIDFGDAV 235 (1013)
T ss_pred HHHHHHHHHHHhc-CCcceECCCCCcccEEEcCCCCcceEEEEECcccc
Confidence 2221 1211 123499999999999999875 555 99999875
|
|
| >PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length | Back alignment and domain information |
|---|
Probab=93.54 E-value=0.31 Score=52.24 Aligned_cols=151 Identities=14% Similarity=0.155 Sum_probs=90.5
Q ss_pred CceEEEEEEecCCCEEEEEEeeccccc-chHHHHHHHHHHhhccCCceeeEeeeeecCCceEEEEeeccCCccccccccC
Q 002647 511 GFGVVYRGILDDGREVAVKVLKRANQH-GGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGD 589 (897)
Q Consensus 511 ~fGtVyka~l~~g~~VAVK~lk~~~~~-~~~~f~~Ev~iL~~L~HpNIV~Llg~~~~~~~~~LV~Ey~~gGSL~~~L~~~ 589 (897)
+..+.-+++.+- ....+|++....-. ...-|..+..++.+++- |++|..- ..-.+-+|.|+|..-.
T Consensus 74 gNsTl~~~kt~i-G~L~lKKi~slp~~~~~~~y~nky~v~ArmhG--ilrL~ND--n~~~yGvIlE~Cy~~~-------- 140 (308)
T PF07387_consen 74 GNSTLLIGKTKI-GPLFLKKIRSLPCCINDALYFNKYRVFARMHG--ILRLKND--NNYKYGVILERCYKIK-------- 140 (308)
T ss_pred CceEEEEecccc-chhhhhhccCCCcccchhhhhhhhhHHHHhhh--eeEeecC--CCceeEEEEeeccCcc--------
Confidence 334444444332 23556666543333 44567888999988763 7777632 2334568889884311
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHhhhhccCCCcEEecCCCCCcEEEccCCceEEeccCcchhcccCCCcccccccccccc
Q 002647 590 DKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFG 669 (897)
Q Consensus 590 ~~~~~~Ls~~~rl~Ia~qIa~gL~YLH~~gsp~IIHrDIKpsNILLd~~~~vKLsDFGLAr~~~~~~~~~~~t~~~GT~~ 669 (897)
+ ...-.|..+ ++.|.-.|+. +...+|+|-.|+||+-|..|.+||.|=+....- +..
T Consensus 141 ------i--~~~N~i~ag-i~~L~~fH~~-~~~~lHGD~np~NiM~D~~G~lKlVDP~~Ll~~--------------~V~ 196 (308)
T PF07387_consen 141 ------I--NFSNFITAG-IKDLMDFHSE-NQHCLHGDCNPDNIMCDKFGYLKLVDPVCLLEN--------------QVN 196 (308)
T ss_pred ------c--chhHHHHHh-HHHHHHhhcc-CCCeecCCCChhheeecCCCCEEecChhhhhhh--------------eee
Confidence 1 111122222 4678888955 357999999999999999999999998754310 111
Q ss_pred cCChhhhhcCCCCccccEEechhHHHHHHhCC
Q 002647 670 YLAPEYAMTGHLLVKSDVYSYGVVLLELLTGR 701 (897)
Q Consensus 670 Y~APE~l~~~~~t~kSDVwSfGvIL~ELlTGk 701 (897)
|.-= +....|.++.+-+|=.-++++....
T Consensus 197 ~vN~---~Y~~lT~~aE~~~fv~s~l~~v~~~ 225 (308)
T PF07387_consen 197 MVNI---EYESLTQEAEVKVFVKSCLKLVEKQ 225 (308)
T ss_pred EEee---eccccChHHHHHHHHHHHHHHHHHH
Confidence 2221 1234566777777777777776643
|
The function of this family is unknown. |
| >PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane | Back alignment and domain information |
|---|
Probab=93.47 E-value=0.047 Score=52.89 Aligned_cols=37 Identities=8% Similarity=0.152 Sum_probs=26.4
Q ss_pred CCCCccceehhHHHHHHHHHHHHHHhhhheeecCCCC
Q 002647 403 KGGLRGSMIAAIVLSSFTALVLCFGIAVFLLKRGAFR 439 (897)
Q Consensus 403 ~~~~~~~iIi~Ivvg~~~vllLll~i~~~~~~rrk~r 439 (897)
.+++....|++|++|+++++++++++++|+++|+++|
T Consensus 58 ~h~fs~~~i~~Ii~gv~aGvIg~Illi~y~irR~~Kk 94 (122)
T PF01102_consen 58 VHRFSEPAIIGIIFGVMAGVIGIILLISYCIRRLRKK 94 (122)
T ss_dssp SSSSS-TCHHHHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred ccCccccceeehhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4567788899999998888887777777776666554
|
Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A. |
| >PRK12396 5-methylribose kinase; Reviewed | Back alignment and domain information |
|---|
Probab=92.96 E-value=0.35 Score=56.01 Aligned_cols=75 Identities=20% Similarity=0.237 Sum_probs=49.0
Q ss_pred eeEEeecCceEEEEEEecC-CCEEEEEEeec---cc---ccchHHHHHHHHHHhhcc--CCceeeEeeeeecCCceEEEE
Q 002647 504 SRIIGEGGFGVVYRGILDD-GREVAVKVLKR---AN---QHGGREFLAELEMLSRLH--HRNLVKLFGVCIEDNNRCLVY 574 (897)
Q Consensus 504 ~~~LG~G~fGtVyka~l~~-g~~VAVK~lk~---~~---~~~~~~f~~Ev~iL~~L~--HpNIV~Llg~~~~~~~~~LV~ 574 (897)
.+.||-|--..||++...+ ++.|+||.-.. .. ....+...-|.+.|+.+. .|..|+=+-++ +++...+||
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~-D~e~~~~vM 112 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF-DSVMNCCVM 112 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE-CcHHhhHHH
Confidence 4678999999999999753 56799997532 11 223355667888888763 35444433222 345567899
Q ss_pred eeccC
Q 002647 575 ELIHN 579 (897)
Q Consensus 575 Ey~~g 579 (897)
|+++.
T Consensus 113 EdL~~ 117 (409)
T PRK12396 113 EDLSD 117 (409)
T ss_pred HhCcc
Confidence 98864
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=92.76 E-value=0.09 Score=64.33 Aligned_cols=49 Identities=6% Similarity=-0.047 Sum_probs=30.9
Q ss_pred cccceeeeecccccCCchhhhhhhcccccceeeccCCCCCcceEEEEeC
Q 002647 312 KSTALINLVPLGVQFDDTVAFLIFKKFWQRQVFIKPSLFGAYEVLYVHY 360 (897)
Q Consensus 312 ~~~~~~~l~P~~~~~~~~~~~~L~~~~~s~~vp~~~~~fg~y~v~~v~~ 360 (897)
..++...+.+....+..++.++|++|.++|.+|.....+.+.+.+++..
T Consensus 451 ~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 451 GNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred CCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 3334334444456667777888888888888887666555666555543
|
|
| >PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function | Back alignment and domain information |
|---|
Probab=92.33 E-value=0.83 Score=50.02 Aligned_cols=30 Identities=40% Similarity=0.479 Sum_probs=25.1
Q ss_pred cEEecCCCCCcEEEccC--C---ceEEeccCcchh
Q 002647 622 RVIHRDFKSSNILLEHD--F---TPKVSDFGLART 651 (897)
Q Consensus 622 ~IIHrDIKpsNILLd~~--~---~vKLsDFGLAr~ 651 (897)
-|+|||++..|||+..+ + .+++.||.+++.
T Consensus 216 vl~HGD~w~nNilf~~~~~g~~~~~~liDfQ~~~~ 250 (294)
T PF02958_consen 216 VLCHGDFWTNNILFKYDDDGKPIDVVLIDFQLARY 250 (294)
T ss_pred EEEcCccCHHhEeEccccccccccceeeccccccC
Confidence 49999999999999654 3 699999988764
|
All known members of this group are proteins from drosophila and Caenorhabditis elegans. |
| >PTZ00382 Variant-specific surface protein (VSP); Provisional | Back alignment and domain information |
|---|
Probab=91.58 E-value=0.091 Score=48.92 Aligned_cols=33 Identities=18% Similarity=0.282 Sum_probs=21.4
Q ss_pred CCCCCccceehhHHHHHHHHHHHHHHhhhheee
Q 002647 402 KKGGLRGSMIAAIVLSSFTALVLCFGIAVFLLK 434 (897)
Q Consensus 402 ~~~~~~~~iIi~Ivvg~~~vllLll~i~~~~~~ 434 (897)
.+++++.+.|++|++++++++.+++++++||+.
T Consensus 59 ~~~~ls~gaiagi~vg~~~~v~~lv~~l~w~f~ 91 (96)
T PTZ00382 59 NRSGLSTGAIAGISVAVVAVVGGLVGFLCWWFV 91 (96)
T ss_pred CCCCcccccEEEEEeehhhHHHHHHHHHhheeE
Confidence 456778889999988877666544444433333
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 897 | ||||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 1e-61 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 5e-61 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 7e-54 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 4e-53 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 1e-40 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 2e-40 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 2e-40 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 7e-39 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 2e-27 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 7e-27 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 1e-26 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 2e-26 | ||
| 3dtc_A | 271 | Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp | 5e-26 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 1e-23 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 5e-23 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 1e-22 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 1e-22 | ||
| 4gt5_A | 306 | Crystal Structure Of The Inactive Trka Kinase Domai | 1e-22 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 1e-22 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 1e-22 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 2e-22 | ||
| 4f0i_A | 300 | Crystal Structure Of Apo Trka Length = 300 | 2e-22 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 2e-22 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 4e-22 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 5e-22 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 6e-22 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 1e-21 | ||
| 3dkg_A | 317 | Sgx Clone 5698a109kfg1h1 Length = 317 | 3e-21 | ||
| 3q6w_A | 307 | Structure Of Dually-phosphorylated Met Receptor Kin | 3e-21 | ||
| 2g15_A | 318 | Structural Characterization Of Autoinhibited C-Met | 3e-21 | ||
| 2wd1_A | 292 | Human C-Met Kinase In Complex With Azaindole Inhibi | 4e-21 | ||
| 4gg5_A | 319 | Crystal Structure Of Cmet In Complex With Novel Inh | 4e-21 | ||
| 3q6u_A | 308 | Structure Of The Apo Met Receptor Kinase In The Dua | 4e-21 | ||
| 3lq8_A | 302 | Structure Of The Kinase Domain Of C-Met Bound To Xl | 4e-21 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 5e-21 | ||
| 2wgj_A | 306 | X-Ray Structure Of Pf-02341066 Bound To The Kinase | 5e-21 | ||
| 3i5n_A | 309 | Crystal Structure Of C-Met With Triazolopyridazine | 5e-21 | ||
| 2rfn_A | 310 | X-ray Structure Of C-met With Inhibitor. Length = 3 | 5e-21 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 5e-21 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 5e-21 | ||
| 3f66_A | 298 | Human C-Met Kinase In Complex With Quinoxaline Inhi | 5e-21 | ||
| 3c1x_A | 373 | Crystal Structure Of The Tyrosine Kinase Domain Of | 5e-21 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 5e-21 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 6e-21 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 6e-21 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 6e-21 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 7e-21 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 7e-21 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 7e-21 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 7e-21 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 8e-21 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 8e-21 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 9e-21 | ||
| 3qti_A | 314 | C-Met Kinase In Complex With Nvp-Bvu972 Length = 31 | 9e-21 | ||
| 3a4p_A | 319 | Human C-Met Kinase Domain Complexed With 6-Benzylox | 9e-21 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 1e-20 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 1e-20 | ||
| 1p4o_A | 322 | Structure Of Apo Unactivated Igf-1r Kinase Domain A | 1e-20 | ||
| 3cth_A | 314 | Crystal Structure Of The Tyrosine Kinase Domain Of | 1e-20 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 1e-20 | ||
| 3dkc_A | 317 | Sgx Clone 5698a65kfg1h1 Length = 317 | 1e-20 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 1e-20 | ||
| 1r0p_A | 312 | Crystal Structure Of The Tyrosine Kinase Domain Of | 1e-20 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 1e-20 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 1e-20 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 1e-20 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 1e-20 | ||
| 1m7n_A | 322 | Crystal Structure Of Unactivated Apo Insulin-Like G | 1e-20 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 1e-20 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 2e-20 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 2e-20 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 2e-20 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 2e-20 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 2e-20 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 2e-20 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 2e-20 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 2e-20 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 2e-20 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 3e-20 | ||
| 4e4l_A | 302 | Jak1 Kinase (Jh1 Domain) In Complex With Compound 3 | 3e-20 | ||
| 3o23_A | 305 | Human Unphosphorylated Igf1-R Kinase Domain In Comp | 3e-20 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 3e-20 | ||
| 3lvp_A | 336 | Crystal Structure Of Bisphosphorylated Igf1-R Kinas | 4e-20 | ||
| 2zm3_A | 308 | Complex Structure Of Insulin-Like Growth Factor Rec | 4e-20 | ||
| 3eyg_A | 290 | Crystal Structures Of Jak1 And Jak2 Inhibitor Compl | 5e-20 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 6e-20 | ||
| 3lw0_A | 304 | Igf-1rk In Complex With Ligand Msc1609119a-1 Length | 6e-20 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 7e-20 | ||
| 3i81_A | 315 | Crystal Structure Of Insulin-Like Growth Factor 1 R | 8e-20 | ||
| 1jqh_A | 308 | Igf-1 Receptor Kinase Domain Length = 308 | 8e-20 | ||
| 2oj9_A | 307 | Structure Of Igf-1r Kinase Domain Complexed With A | 9e-20 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 9e-20 | ||
| 1k3a_A | 299 | Structure Of The Insulin-Like Growth Factor 1 Recep | 1e-19 | ||
| 4eqm_A | 294 | Structural Analysis Of Staphylococcus Aureus Serine | 2e-19 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 2e-19 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 2e-19 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 2e-19 | ||
| 3qqu_A | 301 | Cocrystal Structure Of Unphosphorylated Igf With Py | 2e-19 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 3e-19 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 3e-19 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 3e-19 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 4e-19 | ||
| 3lcd_A | 329 | Inhibitor Bound To A Dfg-In Structure Of The Kinase | 4e-19 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 4e-19 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 4e-19 | ||
| 3d94_A | 301 | Crystal Structure Of The Insulin-Like Growth Factor | 5e-19 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 6e-19 | ||
| 2ogv_A | 317 | Crystal Structure Of The Autoinhibited Human C-Fms | 6e-19 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 6e-19 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 7e-19 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 8e-19 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 8e-19 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 8e-19 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 9e-19 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 9e-19 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 9e-19 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 1e-18 | ||
| 3pls_A | 298 | Ron In Complex With Ligand Amp-Pnp Length = 298 | 1e-18 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 1e-18 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 1e-18 | ||
| 2r4b_A | 321 | Erbb4 Kinase Domain Complexed With A Thienopyrimidi | 1e-18 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 1e-18 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 1e-18 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 1e-18 | ||
| 1ir3_A | 306 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 1e-18 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 1e-18 | ||
| 2z8c_A | 303 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 1e-18 | ||
| 1i44_A | 306 | Crystallographic Studies Of An Activation Loop Muta | 2e-18 | ||
| 1rqq_A | 306 | Crystal Structure Of The Insulin Receptor Kinase In | 2e-18 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 2e-18 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 2e-18 | ||
| 2hen_A | 286 | Crystal Structure Of The Ephb2 Receptor Kinase Doma | 2e-18 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 2e-18 | ||
| 1irk_A | 306 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-18 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 3e-18 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 3e-18 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 3e-18 | ||
| 3bea_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P | 3e-18 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 3e-18 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 3e-18 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 3e-18 | ||
| 3lco_A | 324 | Inhibitor Bound To A Dfg-Out Structure Of The Kinas | 3e-18 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 3e-18 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 4e-18 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 4e-18 | ||
| 3eta_A | 317 | Kinase Domain Of Insulin Receptor Complexed With A | 4e-18 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 4e-18 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 4e-18 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 5e-18 | ||
| 3cok_A | 278 | Crystal Structure Of Plk4 Kinase Length = 278 | 5e-18 | ||
| 1rjb_A | 344 | Crystal Structure Of Flt3 Length = 344 | 5e-18 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 5e-18 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 6e-18 | ||
| 1luf_A | 343 | Crystal Structure Of The Musk Tyrosine Kinase: Insi | 6e-18 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 6e-18 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 7e-18 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 7e-18 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 8e-18 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 8e-18 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 8e-18 | ||
| 2i1m_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An | 8e-18 | ||
| 3bbt_B | 328 | Crystal Structure Of The Erbb4 Kinase In Complex Wi | 8e-18 | ||
| 1p14_A | 306 | Crystal Structure Of A Catalytic-Loop Mutant Of The | 1e-17 | ||
| 3ekk_A | 307 | Insulin Receptor Kinase Complexed With An Inhibitor | 1e-17 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-17 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-17 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 1e-17 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-17 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 1e-17 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 1e-17 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 1e-17 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 1e-17 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 1e-17 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 1e-17 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 2e-17 | ||
| 3f61_A | 311 | Crystal Structure Of M. Tuberculosis Pknb Leu33aspV | 3e-17 | ||
| 3pp0_A | 338 | Crystal Structure Of The Kinase Domain Of Human Her | 3e-17 | ||
| 4hzs_A | 341 | Crystal Structure Of Ack1 Kinase Domain With C-term | 4e-17 | ||
| 3f69_A | 311 | Crystal Structure Of The Mycobacterium Tuberculosis | 4e-17 | ||
| 1u54_A | 291 | Crystal Structures Of The Phosphorylated And Unphos | 4e-17 | ||
| 3ori_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain L33d | 5e-17 | ||
| 1u46_A | 291 | Crystal Structure Of The Unphosphorylated Kinase Do | 5e-17 | ||
| 4ewh_B | 275 | Co-Crystal Structure Of Ack1 With Inhibitor Length | 5e-17 | ||
| 3eqp_B | 276 | Crystal Structure Of Ack1 With Compound T95 Length | 5e-17 | ||
| 4hzr_A | 277 | Crystal Structure Of Ack1 Kinase Domain Length = 27 | 6e-17 | ||
| 4id7_A | 273 | Ack1 Kinase In Complex With The Inhibitor Cis-3-[8- | 7e-17 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 7e-17 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 8e-17 | ||
| 4gt4_A | 308 | Structure Of Unliganded, Inactive Ror2 Kinase Domai | 9e-17 | ||
| 2i0v_A | 335 | C-Fms Tyrosine Kinase In Complex With A Quinolone I | 1e-16 | ||
| 3zzw_A | 289 | Crystal Structure Of The Kinase Domain Of Ror2 Leng | 1e-16 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 1e-16 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 1e-16 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 1e-16 | ||
| 1s9i_A | 354 | X-Ray Structure Of The Human Mitogen-Activated Prot | 1e-16 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 2e-16 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 2e-16 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 2e-16 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 2e-16 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 2e-16 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 2e-16 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 2e-16 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 2e-16 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 2e-16 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 2e-16 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-16 | ||
| 3qa8_A | 676 | Crystal Structure Of Inhibitor Of Kappa B Kinase Be | 2e-16 | ||
| 3rzf_A | 677 | Crystal Structure Of Inhibitor Of Kappab Kinase Bet | 2e-16 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 3e-16 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 3e-16 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 3e-16 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 3e-16 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 3e-16 | ||
| 2j0l_A | 276 | Crystal Structure Of A The Active Conformation Of T | 3e-16 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 3e-16 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 3e-16 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 3e-16 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 3e-16 | ||
| 3lct_A | 344 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 3e-16 | ||
| 2jkm_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 3e-16 | ||
| 3l9p_A | 367 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 3e-16 | ||
| 4ebw_A | 304 | Structure Of Focal Adhesion Kinase Catalytic Domain | 3e-16 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 4e-16 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 4e-16 | ||
| 3pxk_A | 282 | Focal Adhesion Kinase Catalytic Domain In Complex W | 4e-16 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 4e-16 | ||
| 2etm_A | 281 | Crystal Structure Of Focal Adhesion Kinase Domain C | 4e-16 | ||
| 3bz3_A | 276 | Crystal Structure Analysis Of Focal Adhesion Kinase | 4e-16 | ||
| 1mp8_A | 281 | Crystal Structure Of Focal Adhesion Kinase (Fak) Le | 4e-16 | ||
| 2j0m_B | 276 | Crystal Structure A Two-Chain Complex Between The F | 5e-16 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 5e-16 | ||
| 4fnw_A | 327 | Crystal Structure Of The Apo F1174l Anaplastic Lymp | 5e-16 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 5e-16 | ||
| 3orm_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain D76a | 6e-16 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 7e-16 | ||
| 2yjr_A | 342 | Structure Of F1174l Mutant Anaplastic Lymphoma Kina | 7e-16 | ||
| 2oo8_X | 317 | Synthesis, Structural Analysis, And Sar Studies Of | 7e-16 | ||
| 2j0j_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 8e-16 | ||
| 1fvr_A | 327 | Tie2 Kinase Domain Length = 327 | 8e-16 | ||
| 2jkk_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 8e-16 | ||
| 1mru_A | 311 | Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob | 8e-16 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 8e-16 | ||
| 2qlu_A | 314 | Crystal Structure Of Activin Receptor Type Ii Kinas | 1e-15 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 1e-15 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 1e-15 | ||
| 1ob3_A | 288 | Structure Of P. Falciparum Pfpk5 Length = 288 | 1e-15 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 1e-15 | ||
| 4fnz_A | 327 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 1e-15 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 1e-15 | ||
| 2xb7_A | 315 | Structure Of Human Anaplastic Lymphoma Kinase In Co | 1e-15 | ||
| 3oht_A | 389 | Crystal Structure Of Salmo Salar P38alpha Length = | 1e-15 | ||
| 2yfx_A | 327 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 1e-15 | ||
| 4fob_A | 353 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 1e-15 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 1e-15 | ||
| 3ika_A | 331 | Crystal Structure Of Egfr 696-1022 T790m Mutant Cov | 1e-15 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 1e-15 | ||
| 4dce_A | 333 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 1e-15 | ||
| 2xp2_A | 327 | Structure Of The Human Anaplastic Lymphoma Kinase I | 1e-15 | ||
| 1v0o_A | 288 | Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho | 1e-15 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 2e-15 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 2e-15 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 2e-15 | ||
| 2yhv_A | 342 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 2e-15 | ||
| 3aox_A | 344 | X-Ray Crystal Structure Of Human Anaplastic Lymphom | 2e-15 | ||
| 1v0b_A | 288 | Crystal Structure Of The T198a Mutant Of Pfpk5 Leng | 2e-15 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 2e-15 | ||
| 2jiu_A | 328 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 2e-15 | ||
| 4i24_A | 329 | Structure Of T790m Egfr Kinase Domain Co-crystalliz | 2e-15 | ||
| 1o6y_A | 299 | Catalytic Domain Of Pknb Kinase From Mycobacterium | 2e-15 | ||
| 2j0k_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 2e-15 | ||
| 2pk9_A | 317 | Structure Of The Pho85-pho80 Cdk-cyclin Complex Of | 2e-15 | ||
| 2jiv_A | 328 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 2e-15 | ||
| 3dak_A | 290 | Crystal Structure Of Domain-Swapped Osr1 Kinase Dom | 2e-15 | ||
| 2vwi_A | 303 | Structure Of The Osr1 Kinase, A Hypertension Drug T | 2e-15 | ||
| 2wqm_A | 310 | Structure Of Apo Human Nek7 Length = 310 | 2e-15 | ||
| 2yjs_A | 342 | Structure Of C1156y Mutant Anaplastic Lymphoma Kina | 2e-15 | ||
| 2p0c_A | 313 | Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro | 2e-15 | ||
| 4i23_A | 329 | Crystal Structure Of The Wild-type Egfr Kinase Doma | 2e-15 | ||
| 3c7q_A | 316 | Structure Of Vegfr2 Kinase Domain In Complex With B | 2e-15 | ||
| 4g5p_A | 330 | Crystal Structure Of Egfr Kinase T790m In Complex W | 2e-15 | ||
| 1m14_A | 333 | Tyrosine Kinase Domain From Epidermal Growth Factor | 3e-15 | ||
| 3vjo_A | 334 | Crystal Structure Of The Wild-Type Egfr Kinase Doma | 3e-15 | ||
| 3pxf_A | 306 | Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N | 3e-15 | ||
| 3ezr_A | 300 | Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ | 3e-15 | ||
| 4erw_A | 306 | Cdk2 In Complex With Staurosporine Length = 306 | 3e-15 | ||
| 2w17_A | 299 | Cdk2 In Complex With The Imidazole Pyrimidine Amide | 3e-15 | ||
| 2jit_A | 327 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 3e-15 | ||
| 1fin_A | 298 | Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = | 3e-15 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 3e-15 | ||
| 1xkk_A | 352 | Egfr Kinase Domain Complexed With A Quinazoline Inh | 3e-15 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 3e-15 | ||
| 3pj8_A | 299 | Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D] | 3e-15 | ||
| 1pf8_A | 298 | Crystal Structure Of Human Cyclin-dependent Kinase | 3e-15 | ||
| 3cly_A | 334 | Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase | 3e-15 | ||
| 2pvf_A | 334 | Crystal Structure Of Tyrosine Phosphorylated Activa | 3e-15 | ||
| 2wqb_A | 324 | Structure Of The Tie2 Kinase Domain In Complex With | 3e-15 | ||
| 1gz8_A | 299 | Human Cyclin Dependent Kinase 2 Complexed With The | 3e-15 | ||
| 2oh4_A | 316 | Crystal Structure Of Vegfr2 With A Benzimidazole-Ur | 3e-15 | ||
| 4g5j_A | 330 | Crystal Structure Of Egfr Kinase In Complex With Bi | 3e-15 | ||
| 2j5f_A | 327 | Crystal Structure Of Egfr Kinase Domain In Complex | 3e-15 | ||
| 2gs7_A | 330 | Crystal Structure Of The Inactive Egfr Kinase Domai | 3e-15 | ||
| 3lzb_A | 327 | Egfr Kinase Domain Complexed With An Imidazo[2,1-B] | 4e-15 | ||
| 2p2h_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 4e-15 | ||
| 2gs2_A | 330 | Crystal Structure Of The Active Egfr Kinase Domain | 4e-15 | ||
| 4fnx_A | 327 | Crystal Structure Of The Apo R1275q Anaplastic Lymp | 4e-15 | ||
| 1vyw_A | 309 | Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = | 4e-15 | ||
| 2p2i_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 4e-15 | ||
| 2j5e_A | 327 | Crystal Structure Of Egfr Kinase Domain In Complex | 4e-15 | ||
| 2ivv_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 4e-15 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 4e-15 | ||
| 2f57_A | 317 | Crystal Structure Of The Human P21-activated Kinase | 4e-15 | ||
| 3u6j_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 5e-15 | ||
| 3ewh_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 5e-15 | ||
| 1vr2_A | 316 | Human Vascular Endothelial Growth Factor Receptor 2 | 5e-15 | ||
| 1gii_A | 298 | Human Cyclin Dependent Kinase 2 Complexed With The | 5e-15 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 5e-15 | ||
| 2psq_A | 370 | Crystal Structure Of Unphosphorylated Unactivated W | 5e-15 | ||
| 1ywn_A | 316 | Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p | 5e-15 | ||
| 2pzp_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 5e-15 | ||
| 1pkg_A | 329 | Structure Of A C-kit Kinase Product Complex Length | 5e-15 | ||
| 3gop_A | 361 | Crystal Structure Of The Egf Receptor Juxtamembrane | 5e-15 | ||
| 2xir_A | 316 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 6e-15 | ||
| 3vnt_A | 318 | Crystal Structure Of The Kinase Domain Of Human Veg | 6e-15 | ||
| 3g0e_A | 336 | Kit Kinase Domain In Complex With Sunitinib Length | 6e-15 | ||
| 2puu_A | 348 | Crystal Structure Of P38 Complex With 1-(5-Tert-But | 6e-15 | ||
| 2ivt_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 6e-15 | ||
| 3cjf_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 7e-15 | ||
| 1t46_A | 313 | Structural Basis For The Autoinhibition And Sti-571 | 7e-15 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 7e-15 | ||
| 1oit_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 7e-15 | ||
| 2baq_A | 365 | P38alpha Bound To Ro3201195 Length = 365 | 7e-15 | ||
| 3cjg_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 7e-15 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 7e-15 | ||
| 2fsl_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a+f3 | 7e-15 | ||
| 4agc_A | 353 | Crystal Structure Of Vegfr2 (Juxtamembrane And Kina | 7e-15 | ||
| 2pz5_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 7e-15 | ||
| 2fso_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a) A | 7e-15 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 7e-15 | ||
| 2pvy_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 7e-15 | ||
| 2iw6_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com | 7e-15 | ||
| 4hjo_A | 337 | Crystal Structure Of The Inactive Egfr Tyrosine Kin | 7e-15 | ||
| 1t45_A | 331 | Structural Basis For The Autoinhibition And Sti-571 | 7e-15 | ||
| 4e5a_X | 360 | The W197a Mutant Of P38a Map Kinase Length = 360 | 8e-15 | ||
| 2fst_X | 367 | Mitogen Activated Protein Kinase P38alpha (d176a+f3 | 8e-15 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 8e-15 | ||
| 2ivs_A | 314 | Crystal Structure Of Non-Phosphorylated Ret Tyrosin | 9e-15 | ||
| 4eos_A | 300 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 9e-15 | ||
| 3orn_A | 307 | Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In | 9e-15 | ||
| 3g0f_A | 336 | Kit Kinase Domain Mutant D816h In Complex With Suni | 9e-15 | ||
| 2gtm_A | 348 | Mutated Mouse P38 Map Kinase Domain In Complex With | 9e-15 | ||
| 4eop_A | 300 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 1e-14 | ||
| 1lew_A | 360 | Crystal Structure Of Map Kinase P38 Complexed To Th | 1e-14 | ||
| 4eoq_A | 301 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 1e-14 | ||
| 4bcq_A | 301 | Structure Of Cdk2 In Complex With Cyclin A And A 2- | 1e-14 | ||
| 3ug1_A | 334 | Crystal Structure Of The Mutated Egfr Kinase Domain | 1e-14 | ||
| 1qmz_A | 299 | Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com | 1e-14 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 1e-14 | ||
| 2pwl_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-14 | ||
| 3p4k_A | 370 | The Third Conformation Of P38a Map Kinase Observed | 1e-14 | ||
| 1h1p_A | 303 | Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP | 1e-14 | ||
| 1e9h_A | 297 | Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex | 1e-14 | ||
| 3ri1_A | 313 | Crystal Structure Of The Catalytic Domain Of Fgfr2 | 1e-14 | ||
| 1bmk_A | 379 | The Complex Structure Of The Map Kinase P38SB218655 | 1e-14 | ||
| 3bht_A | 300 | Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN | 1e-14 | ||
| 3hvc_A | 362 | Crystal Structure Of Human P38alpha Map Kinase Leng | 1e-14 | ||
| 4i1z_A | 329 | Crystal Structure Of The Monomeric (v948r) Form Of | 1e-14 | ||
| 1gjo_A | 316 | The Fgfr2 Tyrosine Kinase Domain Length = 316 | 1e-14 | ||
| 1w98_A | 298 | The Structural Basis Of Cdk2 Activation By Cyclin E | 1e-14 | ||
| 3tg1_A | 380 | Crystal Structure Of P38alpha In Complex With A Map | 1e-14 | ||
| 2bal_A | 365 | P38alpha Map Kinase Bound To Pyrazoloamine Length = | 1e-14 | ||
| 4i21_A | 329 | Crystal Structure Of L858r + T790m Egfr Kinase Doma | 1e-14 | ||
| 3bel_A | 315 | X-Ray Structure Of Egfr In Complex With Oxime Inhib | 1e-14 | ||
| 3ody_X | 360 | Crystal Structure Of P38alpha Y323q Active Mutant L | 1e-14 | ||
| 2eb2_A | 334 | Crystal Structure Of Mutated Egfr Kinase Domain (G7 | 1e-14 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 1e-14 | ||
| 1ogu_A | 302 | Structure Of Human Thr160-phospho Cdk2/cyclin A Com | 1e-14 | ||
| 3od6_X | 360 | Crystal Structure Of P38alpha Y323t Active Mutant L | 1e-14 | ||
| 3is5_A | 285 | Crystal Structure Of Cdpk Kinase Domain From Toxopl | 1e-14 | ||
| 3d83_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 1e-14 | ||
| 4i3z_A | 296 | Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES | 1e-14 | ||
| 4eoo_A | 299 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 1e-14 | ||
| 4eoi_A | 299 | Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc | 1e-14 | ||
| 3oef_X | 360 | Crystal Structure Of Y323f Inactive Mutant Of P38al | 1e-14 | ||
| 2baj_A | 365 | P38alpha Bound To Pyrazolourea Length = 365 | 1e-14 | ||
| 3hrb_A | 359 | P38 Kinase Crystal Structure In Complex With Small | 1e-14 | ||
| 4i20_A | 329 | Crystal Structure Of Monomeric (v948r) Primary Onco | 1e-14 | ||
| 3e92_A | 371 | Crystal Structure Of P38 Kinase In Complex With A B | 1e-14 | ||
| 3odz_X | 360 | Crystal Structure Of P38alpha Y323r Active Mutant L | 1e-14 | ||
| 3gcu_A | 360 | Human P38 Map Kinase In Complex With Rl48 Length = | 1e-14 | ||
| 1bi8_A | 326 | Mechanism Of G1 Cyclin Dependent Kinase Inhibition | 1e-14 | ||
| 1oir_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 1e-14 | ||
| 1h01_A | 298 | Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili | 1e-14 | ||
| 3g2f_A | 336 | Crystal Structure Of The Kinase Domain Of Bone Morp | 1e-14 | ||
| 2pzr_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-14 | ||
| 1di9_A | 360 | The Structure Of P38 Mitogen-Activated Protein Kina | 1e-14 | ||
| 2npq_A | 367 | A Novel Lipid Binding Site In The P38 Alpha Map Kin | 1e-14 | ||
| 2oza_B | 366 | Structure Of P38alpha Complex Length = 366 | 1e-14 | ||
| 2jgz_A | 289 | Crystal Structure Of Phospho-Cdk2 In Complex With C | 1e-14 | ||
| 3nnu_A | 354 | Crystal Structure Of P38 Alpha In Complex With Dp13 | 1e-14 | ||
| 4h1j_A | 293 | Crystal Structure Of Pyk2 With The Pyrazole 13a Len | 1e-14 | ||
| 3a7f_A | 303 | Human Mst3 Kinase Length = 303 | 1e-14 | ||
| 3k3j_A | 362 | P38alpha Bound To Novel Dfg-Out Compound Pf-0041612 | 1e-14 | ||
| 2lgc_A | 359 | Joint Nmr And X-Ray Refinement Reveals The Structur | 1e-14 | ||
| 3hec_A | 348 | P38 In Complex With Imatinib Length = 348 | 1e-14 | ||
| 1jst_A | 298 | Phosphorylated Cyclin-Dependent Kinase-2 Bound To C | 1e-14 | ||
| 3zsg_A | 362 | X-Ray Structure Of P38alpha Bound To Tak-715 Length | 1e-14 | ||
| 1h1w_A | 289 | High Resolution Crystal Structure Of The Human Pdk1 | 1e-14 | ||
| 3k3i_A | 350 | P38alpha Bound To Novel Dgf-Out Compound Pf-0021595 | 1e-14 | ||
| 3q4t_A | 322 | Crystal Structure Of Activin Receptor Type-Iia (Acv | 1e-14 | ||
| 1bl6_A | 379 | The Complex Structure Of The Map Kinase P38SB216995 | 1e-14 | ||
| 1oz1_A | 372 | P38 Mitogen-Activated Kinase In Complex With 4-Azai | 1e-14 | ||
| 2gfs_A | 372 | P38 Kinase Crystal Structure In Complex With Ro3201 | 1e-14 | ||
| 3s3i_A | 349 | P38 Kinase Crystal Structure In Complex With Small | 1e-14 | ||
| 3d7z_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 1e-14 | ||
| 3mpt_A | 371 | Crystal Structure Of P38 Kinase In Complex With A P | 2e-14 | ||
| 2itn_A | 327 | Crystal Structure Of Egfr Kinase Domain G719s Mutat | 2e-14 | ||
| 3qhr_A | 298 | Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic | 2e-14 | ||
| 3orx_A | 316 | Pdk1 Mutant Bound To Allosteric Disulfide Fragment | 2e-14 | ||
| 2y8o_A | 362 | Crystal Structure Of Human P38alpha Complexed With | 2e-14 | ||
| 1ove_A | 366 | The Structure Of P38 Alpha In Complex With A Dihydr | 2e-14 | ||
| 3kq7_A | 380 | Structure Of Human P38alpha With N-[4-Methyl-3-(6-{ | 2e-14 | ||
| 1zzl_A | 351 | Crystal Structure Of P38 With Triazolopyridine Leng | 2e-14 | ||
| 2y4i_C | 395 | Ksr2-Mek1 Heterodimer Length = 395 | 2e-14 | ||
| 3ckx_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 2e-14 | ||
| 1m7q_A | 366 | Crystal Structure Of P38 Map Kinase In Complex With | 2e-14 | ||
| 2rfd_A | 324 | Crystal Structure Of The Complex Between The Egfr K | 2e-14 | ||
| 3cc6_A | 281 | Crystal Structure Of Kinase Domain Of Protein Tyros | 2e-14 | ||
| 2eb3_A | 334 | Crystal Structure Of Mutated Egfr Kinase Domain (L8 | 2e-14 | ||
| 1jow_B | 308 | Crystal Structure Of A Complex Of Human Cdk6 And A | 2e-14 | ||
| 3fzo_A | 277 | Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin | 2e-14 | ||
| 3dt1_A | 383 | P38 Complexed With A Quinazoline Inhibitor Length = | 2e-14 | ||
| 1uu9_A | 286 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 2e-14 | ||
| 1ian_A | 366 | Human P38 Map Kinase Inhibitor Complex Length = 366 | 2e-14 | ||
| 4ewq_A | 383 | Human P38 Alpha Mapk In Complex With A Pyridazine B | 2e-14 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 2e-14 | ||
| 3nup_A | 307 | Cdk6 (Monomeric) In Complex With Inhibitor Length = | 2e-14 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 2e-14 | ||
| 3zhp_C | 294 | Human Mst3 (stk24) In Complex With Mo25beta Length | 2e-14 | ||
| 3ckw_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 2e-14 | ||
| 2itt_A | 327 | Crystal Structure Of Egfr Kinase Domain L858r Mutat | 2e-14 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 2e-14 | ||
| 3com_A | 314 | Crystal Structure Of Mst1 Kinase Length = 314 | 2e-14 | ||
| 3nus_A | 286 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra | 2e-14 | ||
| 1z5m_A | 286 | Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr | 3e-14 | ||
| 4hvd_A | 314 | Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h | 3e-14 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 3e-14 | ||
| 3pjc_A | 315 | Crystal Structure Of Jak3 Complexed With A Potent A | 3e-14 | ||
| 3lxk_A | 327 | Structural And Thermodynamic Characterization Of Th | 3e-14 | ||
| 3w2o_A | 331 | Egfr Kinase Domain T790m/l858r Mutant With Tak-285 | 3e-14 | ||
| 2r7b_A | 312 | Crystal Structure Of The Phosphoinositide-Dependent | 3e-14 | ||
| 2p55_A | 333 | X-Ray Structure Of The Human Mitogen-Activated Prot | 3e-14 | ||
| 4an2_A | 301 | Crystal Structures Of Human Mek1 With Carboxamide-B | 3e-14 | ||
| 3h9o_A | 311 | Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) | 3e-14 | ||
| 3iop_A | 312 | Pdk-1 In Complex With The Inhibitor Compound-8i Len | 3e-14 | ||
| 3mh2_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 3e-14 | ||
| 3qc4_A | 314 | Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = | 3e-14 | ||
| 3nnx_A | 354 | Crystal Structure Of Phosphorylated P38 Alpha In Co | 3e-14 | ||
| 2ghl_A | 348 | Mutant Mus Musculus P38 Kinase Domain In Complex Wi | 3e-14 | ||
| 3py3_A | 380 | Crystal Structure Of Phosphorylated P38alpha Map Ki | 3e-14 | ||
| 2q0b_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-14 | ||
| 1ywr_A | 360 | Crystal Structure Analysis Of Inactive P38 Kinase D | 3e-14 | ||
| 3fi4_A | 372 | P38 Kinase Crystal Structure In Complex With Ro4499 | 3e-14 | ||
| 1yw2_A | 360 | Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | 4e-14 | ||
| 1s9j_A | 341 | X-Ray Structure Of The Human Mitogen-Activated Prot | 4e-14 | ||
| 2uv2_A | 287 | Crystal Structure Of Human Ste20-Like Kinase Bound | 4e-14 | ||
| 3dfa_A | 286 | Crystal Structure Of Kinase Domain Of Calcium-depen | 4e-14 | ||
| 1uu3_A | 310 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 4e-14 | ||
| 2xch_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 4e-14 | ||
| 3sc1_A | 311 | Novel Isoquinolone Pdk1 Inhibitors Discovered Throu | 4e-14 | ||
| 3rwp_A | 311 | Discovery Of A Novel, Potent And Selective Inhibito | 4e-14 | ||
| 2wei_A | 287 | Crystal Structure Of The Kinase Domain Of Cryptospo | 4e-14 | ||
| 4a07_A | 311 | Human Pdk1 Kinase Domain In Complex With Allosteric | 4e-14 | ||
| 3hrc_A | 311 | Crystal Structure Of A Mutant Of Human Pdk1 Kinase | 4e-14 | ||
| 2biy_A | 310 | Structure Of Pdk1-S241a Mutant Kinase Domain Length | 5e-14 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 5e-14 | ||
| 3ma6_A | 298 | Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr | 5e-14 | ||
| 3gcp_A | 360 | Human P38 Map Kinase In Complex With Sb203580 Lengt | 5e-14 | ||
| 2py3_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 6e-14 | ||
| 3pwy_A | 311 | Crystal Structure Of An Extender (Spd28345)-Modifie | 6e-14 | ||
| 3mbl_A | 328 | Crystal Structure Of The Human Mitogen-Activated Pr | 6e-14 | ||
| 3dv3_A | 322 | Mek1 With Pf-04622664 Bound Length = 322 | 6e-14 | ||
| 3qc9_A | 543 | Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4 | 6e-14 | ||
| 3c4x_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 6e-14 | ||
| 3nun_A | 292 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea | 6e-14 | ||
| 2jfm_A | 325 | Crystal Structure Of Human Ste20-Like Kinase (Unlig | 7e-14 | ||
| 2j51_A | 325 | Crystal Structure Of Human Ste20-Like Kinase Bound | 7e-14 | ||
| 3t8o_A | 543 | Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu | 7e-14 | ||
| 1yvj_A | 290 | Crystal Structure Of The Jak3 Kinase Domain In Comp | 7e-14 | ||
| 3eqc_A | 360 | X-Ray Structure Of The Human Mitogen-Activated Prot | 7e-14 | ||
| 3nax_A | 311 | Pdk1 In Complex With Inhibitor Mp7 Length = 311 | 7e-14 | ||
| 3igo_A | 486 | Crystal Structure Of Cryptosporidium Parvum Cdpk1, | 7e-14 | ||
| 3c4w_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 7e-14 | ||
| 3ggf_A | 301 | Crystal Structure Of Human SerineTHREONINE-Protein | 7e-14 | ||
| 3nay_A | 311 | Pdk1 In Complex With Inhibitor Mp6 Length = 311 | 8e-14 | ||
| 4apc_A | 350 | Crystal Structure Of Human Nima-Related Kinase 1 (N | 8e-14 | ||
| 3gi3_A | 360 | Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana | 8e-14 | ||
| 4g31_A | 299 | Crystal Structure Of Gsk6414 Bound To Perk (R587-R1 | 8e-14 | ||
| 2jfl_A | 325 | Crystal Structure Of Human Ste20-Like Kinase ( Diph | 9e-14 | ||
| 3fi3_A | 364 | Crystal Structure Of Jnk3 With Indazole Inhibitor, | 9e-14 | ||
| 4eom_A | 301 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 9e-14 | ||
| 4eoj_A | 302 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 1e-13 | ||
| 2xck_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 1e-13 | ||
| 2hak_A | 328 | Catalytic And Ubiqutin-Associated Domains Of Mark1P | 1e-13 | ||
| 3vul_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 1e-13 | ||
| 3o8p_A | 360 | Conformational Plasticity Of P38 Map Kinase Dfg Mot | 1e-13 | ||
| 4eon_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 1e-13 | ||
| 4eok_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 1e-13 | ||
| 1pme_A | 380 | Structure Of Penta Mutant Human Erk2 Map Kinase Com | 1e-13 | ||
| 1fot_A | 318 | Structure Of The Unliganded Camp-Dependent Protein | 1e-13 | ||
| 3vum_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M7 | 1e-13 | ||
| 2x7f_A | 326 | Crystal Structure Of The Kinase Domain Of Human Tra | 1e-13 | ||
| 3sls_A | 304 | Crystal Structure Of Human Mek-1 Kinase In Complex | 1e-13 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 1e-13 | ||
| 3ttj_A | 464 | Crystal Structure Of Jnk3 Complexed With Cc-359, A | 1e-13 | ||
| 4bc6_A | 293 | Crystal Structure Of Human Serine Threonine Kinase- | 1e-13 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 1e-13 | ||
| 3mh0_A | 360 | Mutagenesis Of P38 Map Kinase Eshtablishes Key Role | 1e-13 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 2e-13 | ||
| 2j7t_A | 302 | Crystal Structure Of Human Serine Threonine Kinase- | 2e-13 | ||
| 3ku2_A | 507 | Crystal Structure Of Inactivated Form Of Cdpk1 From | 2e-13 | ||
| 1u59_A | 287 | Crystal Structure Of The Zap-70 Kinase Domain In Co | 2e-13 | ||
| 2iw8_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82 | 2e-13 | ||
| 3kvx_A | 364 | Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le | 2e-13 | ||
| 2r9s_A | 356 | C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu | 2e-13 | ||
| 3hx4_A | 508 | Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg | 2e-13 | ||
| 3i79_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 2e-13 | ||
| 3mh3_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 2e-13 | ||
| 1jnk_A | 423 | The C-Jun N-Terminal Kinase (Jnk3s) Complexed With | 2e-13 | ||
| 2ozo_A | 613 | Autoinhibited Intact Human Zap-70 Length = 613 | 2e-13 | ||
| 3fv8_A | 355 | Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le | 2e-13 | ||
| 2r0i_A | 327 | Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len | 2e-13 | ||
| 1zmu_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 2e-13 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 2e-13 | ||
| 3fi2_A | 353 | Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib | 2e-13 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 2e-13 | ||
| 3mh1_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 2e-13 | ||
| 1h4l_A | 292 | Structure And Regulation Of The Cdk5-P25(Nck5a) Com | 3e-13 | ||
| 1ua2_A | 346 | Crystal Structure Of Human Cdk7 Length = 346 | 3e-13 | ||
| 3oxi_A | 362 | Design And Synthesis Of Disubstituted Thiophene And | 3e-13 | ||
| 2o0u_A | 364 | Crystal Structure Of Human Jnk3 Complexed With N-{3 | 3e-13 | ||
| 3ptg_A | 363 | Design And Synthesis Of A Novel, Orally Efficacious | 3e-13 | ||
| 1b6c_B | 342 | Crystal Structure Of The Cytoplasmic Domain Of The | 3e-13 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 3e-13 | ||
| 1rw8_A | 301 | Crystal Structure Of Tgf-Beta Receptor I Kinase Wit | 3e-13 | ||
| 1pmn_A | 364 | Crystal Structure Of Jnk3 In Complex With An Imidaz | 3e-13 | ||
| 2ok1_A | 365 | Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3 | 3e-13 | ||
| 2b1p_A | 355 | Inhibitor Complex Of Jnk3 Length = 355 | 3e-13 | ||
| 1py5_A | 326 | Crystal Structure Of Tgf-Beta Receptor I Kinase Wit | 3e-13 | ||
| 3tzm_A | 309 | Tgf-Beta Receptor Type 1 In Complex With Sb431542 L | 3e-13 | ||
| 2exc_X | 356 | Inhibitor Complex Of Jnk3 Length = 356 | 3e-13 | ||
| 4h36_A | 356 | Crystal Structure Of Jnk3 In Complex With Atf2 Pept | 3e-13 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 3e-13 | ||
| 3d5w_A | 317 | Crystal Structure Of A Phosphorylated Polo-Like Kin | 3e-13 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 3e-13 | ||
| 2wot_A | 306 | Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl) | 3e-13 | ||
| 3d5u_A | 317 | Crystal Structure Of A Wildtype Polo-Like Kinase 1 | 3e-13 | ||
| 2dyl_A | 318 | Crystal Structure Of Human Mitogen-Activated Protei | 3e-13 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 4e-13 | ||
| 3d5v_A | 317 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 4e-13 | ||
| 2wzj_A | 327 | Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82 | 4e-13 | ||
| 1vjy_A | 303 | Crystal Structure Of A Naphthyridine Inhibitor Of H | 4e-13 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 4e-13 | ||
| 1zmw_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 4e-13 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 4e-13 | ||
| 3vuk_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M5 | 5e-13 | ||
| 1u5q_A | 348 | Crystal Structure Of The Tao2 Kinase Domain: Activa | 5e-13 | ||
| 1zmv_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 5e-13 | ||
| 1ukh_A | 369 | Structural Basis For The Selective Inhibition Of Jn | 5e-13 | ||
| 3vui_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 6e-13 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 6e-13 | ||
| 2clq_A | 295 | Structure Of Mitogen-Activated Protein Kinase Kinas | 6e-13 | ||
| 2xrw_A | 371 | Linear Binding Motifs For Jnk And For Calcineurin A | 6e-13 | ||
| 3vud_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 6e-13 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 6e-13 | ||
| 3vug_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 7e-13 | ||
| 4fl3_A | 635 | Structural And Biophysical Characterization Of The | 7e-13 | ||
| 3db6_A | 301 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 7e-13 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 7e-13 | ||
| 3fe3_A | 328 | Crystal Structure Of The Kinase Mark3PAR-1: T211a-S | 7e-13 | ||
| 4fl2_A | 636 | Structural And Biophysical Characterization Of The | 7e-13 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 7e-13 | ||
| 3vuh_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M3 | 7e-13 | ||
| 3iec_A | 319 | Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K | 7e-13 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 7e-13 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 7e-13 | ||
| 3v3v_A | 379 | Structural And Functional Analysis Of Quercetagetin | 8e-13 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 8e-13 | ||
| 2gcd_A | 309 | Tao2 Kinase Domain-Staurosporine Structure Length = | 8e-13 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 8e-13 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 8e-13 | ||
| 3npc_A | 364 | Crystal Structure Of Jnk2 Complexed With Birb796 Le | 8e-13 | ||
| 3lmg_A | 344 | Crystal Structure Of The Erbb3 Kinase Domain In Com | 8e-13 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 9e-13 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 9e-13 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 9e-13 | ||
| 3kex_A | 325 | Crystal Structure Of The Catalytically Inactive Kin | 9e-13 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 9e-13 | ||
| 4ic7_A | 442 | Crystal Structure Of The Erk5 Kinase Domain In Comp | 1e-12 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 1e-12 | ||
| 3gc9_A | 370 | The Structure Of P38beta C119s, C162s In Complex Wi | 1e-12 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 1e-12 | ||
| 1y8g_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 1e-12 | ||
| 3a62_A | 327 | Crystal Structure Of Phosphorylated P70s6k1 Length | 1e-12 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 1e-12 | ||
| 3vw6_A | 269 | Crystal Structure Of Human Apoptosis Signal-Regulat | 1e-12 | ||
| 3hko_A | 345 | Crystal Structure Of A Cdpk Kinase Domain From Cryp | 1e-12 | ||
| 3nyn_A | 576 | Crystal Structure Of G Protein-Coupled Receptor Kin | 1e-12 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 1e-12 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 1e-12 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 1e-12 | ||
| 3a60_A | 327 | Crystal Structure Of Unphosphorylated P70s6k1 (Form | 1e-12 | ||
| 2acx_A | 576 | Crystal Structure Of G Protein Coupled Receptor Kin | 1e-12 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 1e-12 | ||
| 1ung_A | 292 | Structural Mechanism For The Inhibition Of Cdk5-P25 | 1e-12 | ||
| 2a19_B | 284 | Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng | 1e-12 | ||
| 2xs0_A | 386 | Linear Binding Motifs For Jnk And For Calcineurin A | 1e-12 | ||
| 3vf8_A | 299 | Crystal Structure Of Spleen Tyrosine Kinase Syk Cat | 2e-12 | ||
| 3qup_A | 323 | Inhibitor Bound Structure Of The Kinase Domain Of T | 2e-12 | ||
| 3i7c_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 2e-12 | ||
| 2r0u_A | 323 | Crystal Structure Of Chek1 In Complex With Inhibito | 2e-12 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 2e-12 | ||
| 2c30_A | 321 | Crystal Structure Of The Human P21-Activated Kinase | 2e-12 | ||
| 2hog_A | 322 | Crystal Structure Of Chek1 In Complex With Inhibito | 2e-12 | ||
| 3gp0_A | 348 | Crystal Structure Of Human Mitogen Activated Protei | 2e-12 | ||
| 4fsy_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-12 | ||
| 2ydj_A | 276 | Discovery Of Checkpoint Kinase Inhibitor Azd7762 By | 2e-12 | ||
| 3srv_A | 277 | Crystal Structure Of Spleen Tyrosine Kinase (Syk) I | 2e-12 | ||
| 3e7o_A | 360 | Crystal Structure Of Jnk2 Length = 360 | 2e-12 | ||
| 4fsz_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-12 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 2e-12 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 2e-12 | ||
| 4b99_A | 398 | Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le | 2e-12 | ||
| 2br1_A | 297 | Structure-Based Design Of Novel Chk1 Inhibitors: In | 3e-12 | ||
| 1ia8_A | 289 | The 1.7 A Crystal Structure Of Human Cell Cycle Che | 3e-12 | ||
| 1zlt_A | 295 | Crystal Structure Of Chk1 Complexed With A Hymenald | 3e-12 | ||
| 3tub_A | 293 | Crystal Structure Of Syk Kinase Domain With 1-(5-(6 | 3e-12 | ||
| 1xba_A | 291 | Crystal Structure Of Apo Syk Tyrosine Kinase Domain | 3e-12 | ||
| 4f4p_A | 273 | Syk In Complex With Ligand Lasw836 Length = 273 | 3e-12 | ||
| 3emg_A | 291 | Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami | 3e-12 | ||
| 3srv_B | 277 | Crystal Structure Of Spleen Tyrosine Kinase (Syk) I | 3e-12 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 3e-12 | ||
| 4dfl_A | 274 | Crystal Structure Of Spleen Tyrosine Kinase Complex | 3e-12 | ||
| 3elj_A | 369 | Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine | 3e-12 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 3e-12 | ||
| 3gc8_A | 370 | The Structure Of P38beta C162s In Complex With A Di | 3e-12 | ||
| 4fsn_A | 278 | Crystal Structure Of The Chk1 Length = 278 | 3e-12 | ||
| 3uiu_A | 306 | Crystal Structure Of Apo-Pkr Kinase Domain Length = | 3e-12 | ||
| 2zoq_A | 382 | Structural Dissection Of Human Mitogen-Activated Ki | 3e-12 | ||
| 3pze_A | 358 | Jnk1 In Complex With Inhibitor Length = 358 | 3e-12 | ||
| 2x8e_A | 276 | Discovery Of A Novel Class Of Triazolones As Checkp | 3e-12 | ||
| 2v5q_A | 315 | Crystal Structure Of Wild-type Plk-1 Kinase Domain | 3e-12 | ||
| 1zys_A | 273 | Co-Crystal Structure Of Checkpoint Kinase Chk1 With | 3e-12 | ||
| 4fsm_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 3e-12 | ||
| 4fsw_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 4e-12 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 4e-12 | ||
| 2y94_A | 476 | Structure Of An Active Form Of Mammalian Ampk Lengt | 4e-12 | ||
| 4ft3_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 4e-12 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 4e-12 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 4e-12 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 4e-12 | ||
| 4fv6_A | 360 | Crystal Structure Of The Erk2 Complexed With E57 Le | 4e-12 | ||
| 4fux_A | 360 | Crystal Structure Of The Erk2 Complexed With E75 Le | 4e-12 | ||
| 2y9q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 4e-12 | ||
| 2e9v_A | 268 | Structure Of H-Chk1 Complexed With A859017 Length = | 4e-12 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 4e-12 | ||
| 2ghg_A | 269 | H-Chk1 Complexed With A431994 Length = 269 | 4e-12 | ||
| 4fv7_A | 360 | Crystal Structure Of The Erk2 Complexed With E94 Le | 4e-12 | ||
| 2ayp_A | 269 | Crystal Structure Of Chk1 With An Indol Inhibitor L | 4e-12 | ||
| 3kb7_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 4e-12 | ||
| 3ot3_A | 273 | X-Ray Crystal Structure Of Compound 22k Bound To Hu | 4e-12 | ||
| 2yac_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 5e-12 | ||
| 1gol_A | 364 | Coordinates Of Rat Map Kinase Erk2 With An Arginine | 5e-12 | ||
| 3jvr_A | 271 | Characterization Of The Chk1 Allosteric Inhibitor B | 5e-12 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 5e-12 | ||
| 3zu7_A | 365 | Crystal Structure Of A Designed Selected Ankyrin Re | 5e-12 | ||
| 3qyw_A | 364 | Crystal Structure Of Erk2 In Complex With An Inhibi | 5e-12 | ||
| 2z7l_A | 366 | Unphosphorylated Mitogen Activated Protein Kinase E | 5e-12 | ||
| 3c9w_A | 357 | Crystal Structure Of Erk-2 With Hypothemycin Covale | 5e-12 | ||
| 2gph_A | 364 | Docking Motif Interactions In The Map Kinase Erk2 L | 5e-12 | ||
| 2fys_B | 364 | Crystal Structure Of Erk2 Complex With Kim Peptide | 5e-12 | ||
| 4gsb_A | 364 | Monoclinic Crystal Form Of The Apo-Erk2 Length = 36 | 5e-12 | ||
| 2ojg_A | 380 | Crystal Structure Of Erk2 In Complex With N,n-dimet | 5e-12 | ||
| 3o71_A | 358 | Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length | 5e-12 | ||
| 4fst_A | 269 | Crystal Structure Of The Chk1 Length = 269 | 5e-12 | ||
| 3sa0_A | 360 | Complex Of Erk2 With Norathyriol Length = 360 | 6e-12 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 6e-12 | ||
| 3aln_A | 327 | Crystal Structure Of Human Non-Phosphorylated Mkk4 | 6e-12 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 6e-12 | ||
| 3r63_A | 358 | Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | 6e-12 | ||
| 1wzy_A | 368 | Crystal Structure Of Human Erk2 Complexed With A Py | 6e-12 | ||
| 1tvo_A | 368 | The Structure Of Erk2 In Complex With A Small Molec | 6e-12 | ||
| 2ou7_A | 335 | Structure Of The Catalytic Domain Of Human Polo-Lik | 6e-12 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 6e-12 | ||
| 3thb_A | 333 | Structure Of Plk1 Kinase Domain In Complex With A B | 7e-12 | ||
| 2hw6_A | 307 | Crystal Structure Of Mnk1 Catalytic Domain Length = | 7e-12 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 7e-12 | ||
| 1zy4_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 9e-12 | ||
| 3dxn_A | 287 | Crystal Structure Of The Calcium-dependent Kinase F | 9e-12 | ||
| 2rku_A | 294 | Structure Of Plk1 In Complex With Bi2536 Length = 2 | 1e-11 | ||
| 2bdw_A | 362 | Crystal Structure Of The Auto-Inhibited Kinase Doma | 1e-11 | ||
| 3o17_A | 370 | Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3 | 1e-11 | ||
| 4fsu_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 1e-11 | ||
| 3txo_A | 353 | Pkc Eta Kinase In Complex With A Naphthyridine Leng | 2e-11 | ||
| 2x4f_A | 373 | The Crystal Structure Of The Human Myosin Light Cha | 2e-11 | ||
| 3lij_A | 494 | Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) | 2e-11 | ||
| 2g01_A | 370 | Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit | 2e-11 | ||
| 3oz6_A | 388 | Crystal Structure Of Mapk From Cryptosporidium Parv | 2e-11 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 2e-11 | ||
| 3zuv_A | 364 | Crystal Structure Of A Designed Selected Ankyrin Re | 2e-11 | ||
| 2erk_A | 365 | Phosphorylated Map Kinase Erk2 Length = 365 | 2e-11 | ||
| 2bfx_B | 284 | Mechanism Of Aurora-B Activation By Incenp And Inhi | 3e-11 | ||
| 3tei_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 3e-11 | ||
| 2vrx_A | 285 | Structure Of Aurora B Kinase In Complex With Zm4474 | 3e-11 | ||
| 2w96_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 3e-11 | ||
| 2w99_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 3e-11 | ||
| 4fr4_A | 384 | Crystal Structure Of Human SerineTHREONINE-Protein | 3e-11 | ||
| 3cik_A | 689 | Human Grk2 In Complex With Gbetagamma Subunits Leng | 4e-11 | ||
| 3g33_A | 308 | Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | 4e-11 | ||
| 3krw_A | 688 | Human Grk2 In Complex With Gbetgamma Subunits And B | 4e-11 | ||
| 2bfy_A | 284 | Complex Of Aurora-B With Incenp And Hesperidin. Len | 4e-11 | ||
| 1omw_A | 689 | Crystal Structure Of The Complex Between G Protein- | 4e-11 | ||
| 3q5i_A | 504 | Crystal Structure Of Pbanka_031420 Length = 504 | 4e-11 | ||
| 3psc_A | 695 | Bovine Grk2 In Complex With Gbetagamma Subunits Len | 4e-11 | ||
| 2ac5_A | 316 | Structure Of Human Mnk2 Kinase Domain Mutant D228g | 4e-11 | ||
| 4h3q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 4e-11 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 4e-11 | ||
| 4fvp_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain ( | 5e-11 | ||
| 3hzt_A | 467 | Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4 | 5e-11 | ||
| 4ejn_A | 446 | Crystal Structure Of Autoinhibited Form Of Akt1 In | 5e-11 | ||
| 3o96_A | 446 | Crystal Structure Of Human Akt1 With An Allosteric | 5e-11 | ||
| 2w9f_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 6e-11 | ||
| 2b9f_A | 353 | Crystal Structure Of Non-Phosphorylated Fus3 Length | 6e-11 | ||
| 2f9g_A | 353 | Crystal Structure Of Fus3 Phosphorylated On Tyr182 | 6e-11 | ||
| 3cqu_A | 342 | Crystal Structure Of Akt-1 Complexed With Substrate | 7e-11 | ||
| 1zyc_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 7e-11 | ||
| 4gv1_A | 340 | Pkb Alpha In Complex With Azd5363 Length = 340 | 8e-11 | ||
| 3my0_A | 305 | Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai | 8e-11 | ||
| 3ocb_A | 341 | Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor | 9e-11 | ||
| 4fvr_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain M | 1e-10 | ||
| 1yrp_A | 278 | Catalytic Domain Of Human Zip Kinase Phosphorylated | 1e-10 | ||
| 1pyx_A | 422 | Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | 1e-10 | ||
| 1q3d_A | 424 | Gsk-3 Beta Complexed With Staurosporine Length = 42 | 1e-10 | ||
| 1q5k_A | 414 | Crystal Structure Of Glycogen Synthase Kinase 3 In | 2e-10 | ||
| 1i09_A | 420 | Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len | 2e-10 | ||
| 3vhe_A | 359 | Crystal Structure Of Human Vegfr2 Kinase Domain Wit | 2e-10 | ||
| 3mn3_A | 271 | An Inhibited Conformation For The Protein Kinase Do | 2e-10 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 2e-10 | ||
| 3vn9_A | 340 | Rifined Crystal Structure Of Non-Phosphorylated Map | 2e-10 | ||
| 2b9h_A | 353 | Crystal Structure Of Fus3 With A Docking Motif From | 2e-10 | ||
| 3iw4_A | 360 | Crystal Structure Of Pkc Alpha In Complex With Nvp- | 2e-10 | ||
| 3say_A | 430 | Crystal Structure Of Human Glycogen Synthase Kinase | 2e-10 | ||
| 2fh9_A | 274 | Structure And Dimerization Of The Kinase Domain Fro | 2e-10 | ||
| 3vid_A | 356 | Crystal Structure Of Human Vegfr2 Kinase Domain Wit | 2e-10 | ||
| 3dae_A | 283 | Crystal Structure Of Phosphorylated Snf1 Kinase Dom | 2e-10 | ||
| 4acc_A | 465 | Gsk3b In Complex With Inhibitor Length = 465 | 2e-10 | ||
| 3hyh_A | 275 | Crystal Structure Of The Protein Kinase Domain Of Y | 2e-10 | ||
| 1cm8_A | 367 | Phosphorylated Map Kinase P38-Gamma Length = 367 | 2e-10 | ||
| 2ac3_A | 316 | Structure Of Human Mnk2 Kinase Domain Length = 316 | 2e-10 | ||
| 3fme_A | 290 | Crystal Structure Of Human Mitogen-Activated Protei | 2e-10 | ||
| 1r0e_A | 391 | Glycogen Synthase Kinase-3 Beta In Complex With 3-I | 2e-10 | ||
| 3mdy_A | 337 | Crystal Structure Of The Cytoplasmic Domain Of The | 3e-10 | ||
| 2i6l_A | 320 | Crystal Structure Of Human Mitogen Activated Protei | 3e-10 | ||
| 3ll6_A | 337 | Crystal Structure Of The Human Cyclin G Associated | 3e-10 | ||
| 3f88_A | 349 | Glycogen Synthase Kinase 3beta Inhibitor Complex Le | 3e-10 | ||
| 4exu_A | 371 | Mapk13, Inactive Form Length = 371 | 3e-10 | ||
| 2buj_A | 317 | Crystal Structure Of The Human Serine-Threonine Kin | 3e-10 | ||
| 2gnj_A | 350 | Pka Three Fold Mutant Model Of Rho-Kinase With Y-27 | 3e-10 | ||
| 3vhk_A | 368 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 3e-10 | ||
| 4dit_A | 382 | Crystal Structure Of Gsk3beta In Complex With A Imi | 3e-10 | ||
| 1gng_A | 378 | Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With | 3e-10 | ||
| 1y6a_A | 366 | Crystal Structure Of Vegfr2 In Complex With A 2-Ani | 3e-10 | ||
| 3uto_A | 573 | Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin- | 3e-10 | ||
| 2o5k_A | 372 | Crystal Structure Of Gsk3beta In Complex With A Ben | 4e-10 | ||
| 2ow3_A | 352 | Glycogen Synthase Kinase-3 Beta In Complex With Bis | 4e-10 | ||
| 3zrk_A | 371 | Identification Of 2-(4-Pyridyl)thienopyridinones As | 4e-10 | ||
| 3coi_A | 353 | Crystal Structure Of P38delta Kinase Length = 353 | 4e-10 | ||
| 4afj_A | 367 | 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec | 4e-10 | ||
| 3zdi_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 4e-10 | ||
| 3sd0_A | 350 | Identification Of A Glycogen Synthase Kinase-3b Inh | 4e-10 | ||
| 1xjd_A | 345 | Crystal Structure Of Pkc-Theta Complexed With Staur | 4e-10 | ||
| 2w4o_A | 349 | Crystal Structure Of Human Camk4 In Complex With 4- | 4e-10 | ||
| 1h8f_A | 352 | Glycogen Synthase Kinase 3 Beta. Length = 352 | 4e-10 | ||
| 3kl8_A | 269 | Camkiintide Inhibitor Complex Length = 269 | 4e-10 | ||
| 3f7z_A | 350 | X-ray Co-crystal Structure Of Glycogen Synthase Kin | 4e-10 | ||
| 1uv5_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With 6-Br | 4e-10 | ||
| 3gb2_A | 353 | Gsk3beta Inhibitor Complex Length = 353 | 4e-10 | ||
| 1zxe_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 5e-10 | ||
| 3kk8_A | 284 | Camkii Substrate Complex A Length = 284 | 5e-10 | ||
| 2gng_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 5e-10 | ||
| 3kk9_A | 282 | Camkii Substrate Complex B Length = 282 | 5e-10 | ||
| 1koa_A | 491 | Twitchin Kinase Fragment (C.Elegans), Autoregulated | 5e-10 | ||
| 2gnf_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 5e-10 | ||
| 3n9x_A | 432 | Crystal Structure Of Map Kinase From Plasmodium Ber | 6e-10 | ||
| 1xh9_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 6e-10 | ||
| 2xuu_A | 334 | Crystal Structure Of A Dap-Kinase 1 Mutant Length = | 6e-10 | ||
| 1gzn_A | 335 | Structure Of Pkb Kinase Domain Length = 335 | 6e-10 | ||
| 4af3_A | 292 | Human Aurora B Kinase In Complex With Incenp And Vx | 6e-10 | ||
| 1mrv_A | 339 | Crystal Structure Of An Inactive Akt2 Kinase Domain | 6e-10 | ||
| 3bhy_A | 283 | Crystal Structure Of Human Death Associated Protein | 6e-10 | ||
| 1gzk_A | 315 | Molecular Mechanism For The Regulation Of Protein K | 7e-10 | ||
| 1o9u_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 7e-10 | ||
| 4a4x_A | 279 | Nek2-Ede Bound To Cct248662 Length = 279 | 7e-10 | ||
| 3dfc_B | 295 | Crystal Structure Of A Glycine-Rich Loop Mutant Of | 8e-10 | ||
| 1p4f_A | 293 | Death Associated Protein Kinase Catalytic Domain Wi | 8e-10 | ||
| 3f5u_A | 295 | Crystal Structure Of The Death Associated Protein K | 8e-10 | ||
| 1ig1_A | 294 | 1.8a X-Ray Structure Of Ternary Complex Of A Cataly | 8e-10 | ||
| 3e87_A | 335 | Crystal Structures Of The Kinase Domain Of Akt2 In | 8e-10 | ||
| 1o6k_A | 336 | Structure Of Activated Form Of Pkb Kinase Domain S4 | 8e-10 | ||
| 2j90_A | 304 | Crystal Structure Of Human Zip Kinase In Complex Wi | 9e-10 | ||
| 2w5a_A | 279 | Human Nek2 Kinase Adp-Bound Length = 279 | 9e-10 | ||
| 2jdo_A | 342 | Structure Of Pkb-Beta (Akt2) Complexed With Isoquin | 9e-10 | ||
| 2x0g_A | 334 | X-ray Structure Of A Dap-kinase Calmodulin Complex | 1e-09 | ||
| 3bhh_A | 295 | Crystal Structure Of Human Calcium/calmodulin-depen | 1e-09 | ||
| 3gu4_A | 295 | Crystal Structure Of Dapkq23v-Amppnp Length = 295 | 1e-09 | ||
| 3h4j_B | 336 | Crystal Structure Of Pombe Ampk Kdaid Fragment Leng | 1e-09 | ||
| 2xzs_A | 312 | Death Associated Protein Kinase 1 Residues 1-312 Le | 1e-09 | ||
| 2yak_A | 285 | Structure Of Death-Associated Protein Kinase 1 (Dap | 1e-09 | ||
| 1ydt_E | 350 | Structure Of Camp-Dependent Protein Kinase, Alpha-C | 1e-09 | ||
| 1wvw_A | 278 | Crystal Structures Of Kinase Domain Of Dap Kinase I | 1e-09 | ||
| 2w4k_A | 302 | X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | 1e-09 | ||
| 1o6l_A | 337 | Crystal Structure Of An Activated Akt/protein Kinas | 1e-09 | ||
| 2w4j_A | 277 | X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | 1e-09 | ||
| 1ql6_A | 298 | The Catalytic Mechanism Of Phosphorylase Kinase Pro | 1e-09 | ||
| 1smh_A | 350 | Protein Kinase A Variant Complex With Completely Or | 1e-09 | ||
| 3h9r_A | 330 | Crystal Structure Of The Kinase Domain Of Type I Ac | 1e-09 | ||
| 2c1a_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 2e-09 | ||
| 3gu8_A | 295 | Crystal Structure Of Dapkl93g With N6-Cyclopentylad | 2e-09 | ||
| 1stc_E | 350 | Camp-Dependent Protein Kinase, Alpha-Catalytic Subu | 2e-09 | ||
| 1svh_A | 350 | Crystal Structure Of Protein Kinase A In Complex Wi | 2e-09 | ||
| 2h6d_A | 276 | Protein Kinase Domain Of The Human 5'-Amp-Activated | 2e-09 | ||
| 2y0a_A | 326 | Structure Of Dapk1 Construct Residues 1-304 Length | 2e-09 | ||
| 3dnd_A | 350 | Camp-Dependent Protein Kinase Pka Catalytic Subunit | 2e-09 | ||
| 3mtf_A | 301 | Crystal Structure Of The Acvr1 Kinase In Complex Wi | 2e-09 | ||
| 4dym_A | 301 | Crystal Structure Of The Acvr1 Kinase Domain In Com | 2e-09 | ||
| 2jav_A | 279 | Human Kinase With Pyrrole-Indolinone Ligand Length | 2e-09 | ||
| 2f7e_E | 351 | Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu | 2e-09 | ||
| 3mtl_A | 324 | Crystal Structure Of The Pctaire1 Kinase In Complex | 2e-09 | ||
| 2uzt_A | 336 | Pka Structures Of Akt, Indazole-Pyridine Inhibitors | 2e-09 | ||
| 1q8w_A | 350 | The Catalytic Subunit Of Camp-Dependent Protein Kin | 2e-09 | ||
| 2jds_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 2e-09 | ||
| 1phk_A | 298 | Two Structures Of The Catalytic Domain Of Phosphory | 2e-09 | ||
| 1xh7_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 2e-09 | ||
| 2qur_A | 350 | Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe | 3e-09 | ||
| 1q61_A | 350 | Pka Triple Mutant Model Of Pkb Length = 350 | 3e-09 | ||
| 2jam_A | 304 | Crystal Structure Of Human Calmodulin-Dependent Pro | 3e-09 | ||
| 4dfy_A | 371 | Crystal Structure Of R194a Mutant Of Camp-Dependent | 3e-09 | ||
| 3hng_A | 360 | Crystal Structure Of Vegfr1 In Complex With N-(4-ch | 3e-09 | ||
| 2yza_A | 276 | Crystal Structure Of Kinase Domain Of Human 5'-Amp- | 4e-09 | ||
| 1fmo_E | 350 | Crystal Structure Of A Polyhistidine-Tagged Recombi | 4e-09 | ||
| 3qal_E | 350 | Crystal Structure Of Arg280ala Mutant Of Catalytic | 4e-09 | ||
| 3fhi_A | 350 | Crystal Structure Of A Complex Between The Catalyti | 4e-09 | ||
| 1j3h_A | 350 | Crystal Structure Of Apoenzyme Camp-Dependent Prote | 4e-09 | ||
| 1bkx_A | 350 | A Binary Complex Of The Catalytic Subunit Of Camp-D | 4e-09 | ||
| 2erz_E | 351 | Crystal Structure Of C-amp Dependent Kinase (pka) B | 4e-09 | ||
| 4ec8_A | 373 | Structure Of Full Length Cdk9 In Complex With Cycli | 4e-09 | ||
| 2r5t_A | 373 | Crystal Structure Of Inactive Serum And Glucocortic | 4e-09 | ||
| 4dfx_E | 350 | Crystal Structure Of Myristoylated K7c Catalytic Su | 5e-09 | ||
| 2ycf_A | 322 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 5e-09 | ||
| 3mvj_A | 371 | Human Cyclic Amp-Dependent Protein Kinase Pka Inhib | 5e-09 | ||
| 1cmk_E | 350 | Crystal Structures Of The Myristylated Catalytic Su | 5e-09 | ||
| 1szm_A | 350 | Dual Binding Mode Of Bisindolylmaleimide 2 To Prote | 5e-09 | ||
| 1ctp_E | 350 | Structure Of The Mammalian Catalytic Subunit Of Cam | 5e-09 | ||
| 3nx8_A | 351 | Human Camp Dependent Protein Kinase In Complex With | 5e-09 | ||
| 1cdk_A | 350 | Camp-Dependent Protein Kinase Catalytic Subunit (E. | 5e-09 | ||
| 3a8w_A | 345 | Crystal Structure Of Pkciota Kinase Domain Length = | 5e-09 | ||
| 4ae6_A | 343 | Structure And Function Of The Human Sperm-specific | 5e-09 | ||
| 2ycr_A | 323 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 5e-09 | ||
| 2gu8_A | 337 | Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel | 5e-09 | ||
| 1zrz_A | 364 | Crystal Structure Of The Catalytic Domain Of Atypic | 5e-09 | ||
| 3enm_A | 316 | The Structure Of The Map2k Mek6 Reveals An Autoinhi | 5e-09 | ||
| 3agm_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 5e-09 | ||
| 3zh8_A | 349 | A Novel Small Molecule Apkc Inhibitor Length = 349 | 6e-09 | ||
| 4dg3_E | 371 | Crystal Structure Of R336a Mutant Of Camp-dependent | 6e-09 | ||
| 2xk9_A | 322 | Structural Analysis Of Checkpoint Kinase 2 (Chk2) I | 6e-09 | ||
| 2zv2_A | 298 | Crystal Structure Of Human CalciumCALMODULIN-Depend | 6e-09 | ||
| 2w0j_A | 323 | Crystal Structure Of Chk2 In Complex With Nsc 10955 | 6e-09 | ||
| 4aw2_A | 437 | Crystal Structure Of Cdc42 Binding Protein Kinase A | 6e-09 | ||
| 2qcs_A | 350 | A Complex Structure Between The Catalytic And Regul | 6e-09 | ||
| 3agl_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 6e-09 | ||
| 3pvb_A | 345 | Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca | 6e-09 | ||
| 2cn5_A | 329 | Crystal Structure Of Human Chk2 In Complex With Adp | 6e-09 | ||
| 1l3r_E | 350 | Crystal Structure Of A Transition State Mimic Of Th | 6e-09 | ||
| 3mi9_A | 351 | Crystal Structure Of Hiv-1 Tat Complexed With Human | 7e-09 | ||
| 4ae9_A | 343 | Structure And Function Of The Human Sperm-specific | 7e-09 | ||
| 2phk_A | 277 | The Crystal Structure Of A Phosphorylase Kinase Pep | 7e-09 | ||
| 1q24_A | 350 | Pka Double Mutant Model Of Pkb In Complex With Mgat | 8e-09 | ||
| 4bcf_A | 331 | Structure Of Cdk9 In Complex With Cyclin T And A 2- | 8e-09 | ||
| 4dc2_A | 396 | Structure Of Pkc In Complex With A Substrate Peptid | 8e-09 | ||
| 1apm_E | 350 | 2.0 Angstrom Refined Crystal Structure Of The Catal | 8e-09 | ||
| 3o7l_B | 350 | Crystal Structure Of Phospholamban (1-19):pka C-Sub | 8e-09 | ||
| 2vz6_A | 313 | Structure Of Human Calcium Calmodulin Dependent Pro | 8e-09 | ||
| 1syk_A | 350 | Crystal Structure Of E230q Mutant Of Camp-Dependent | 9e-09 | ||
| 3blh_A | 331 | Crystal Structure Of Human Cdk9CYCLINT1 Length = 33 | 9e-09 | ||
| 3gbz_A | 329 | Structure Of The Cmgc Cdk Kinase From Giardia Lambl | 9e-09 | ||
| 2jdt_A | 351 | Structure Of Pka-Pkb Chimera Complexed With Isoquin | 1e-08 | ||
| 3l9m_A | 351 | Crystal Structure Of Pkab3 (Pka Triple Mutant V123a | 1e-08 | ||
| 1jbp_E | 350 | Crystal Structure Of The Catalytic Subunit Of Camp- | 1e-08 | ||
| 2vo0_A | 351 | Structure Of Pka-Pkb Chimera Complexed With C-(4-(4 | 1e-08 | ||
| 2y7j_A | 365 | Structure Of Human Phosphorylase Kinase, Gamma 2 Le | 1e-08 | ||
| 3dls_A | 335 | Crystal Structure Of Human Pas Kinase Bound To Adp | 1e-08 | ||
| 4g3d_A | 371 | Crystal Structure Of Human Nf-kappab Inducing Kinas | 1e-08 | ||
| 3nie_A | 429 | Crystal Structure Of Pf11_0147 Length = 429 | 1e-08 | ||
| 2wel_A | 327 | Crystal Structure Of Su6656-Bound CalciumCALMODULIN | 1e-08 | ||
| 4dn5_A | 356 | Crystal Structure Of Nf-kb-inducing Kinase (nik) Le | 1e-08 | ||
| 2uvy_A | 351 | Structure Of Pka-pkb Chimera Complexed With Methyl- | 2e-08 | ||
| 1zws_A | 288 | Crystal Structure Of The Catalytic Domain Of Human | 2e-08 | ||
| 2a27_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 2e-08 | ||
| 3fpq_A | 290 | Crystal Structure Of The Kinase Domain Of Wnk1 Leng | 2e-08 | ||
| 2vn9_A | 301 | Crystal Structure Of Human Calcium Calmodulin Depen | 2e-08 | ||
| 3ama_A | 351 | Protein Kinase A Sixfold Mutant Model Of Aurora B W | 2e-08 | ||
| 2ya9_A | 361 | Crystal Structure Of The Autoinhibited Form Of Mous | 2e-08 | ||
| 2y4i_B | 319 | Ksr2-Mek1 Heterodimer Length = 319 | 2e-08 | ||
| 1z9x_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 2e-08 | ||
| 1wmk_A | 321 | Human Death-Associated Kinase Drp-1, Mutant S308d D | 2e-08 | ||
| 2a2a_A | 321 | High-resolution Crystallographic Analysis Of The Au | 2e-08 | ||
| 3qam_E | 350 | Crystal Structure Of Glu208ala Mutant Of Catalytic | 2e-08 | ||
| 4agu_A | 311 | Crystal Structure Of The Human Cdkl1 Kinase Domain | 2e-08 | ||
| 3i6u_A | 419 | Structure And Activation Mechanism Of The Chk2 Dna- | 2e-08 | ||
| 3uib_A | 362 | Map Kinase Lmampk10 From Leishmania Major In Comple | 3e-08 | ||
| 3i6w_A | 443 | Structure And Activation Mechanism Of The Chk2 Dna- | 3e-08 | ||
| 2qr8_A | 342 | 2.0a X-ray Structure Of C-terminal Kinase Domain Of | 3e-08 | ||
| 3pg1_A | 362 | Map Kinase Lmampk10 From Leishmania Major (1.95 Ang | 3e-08 | ||
| 3kmw_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 3e-08 | ||
| 3pfq_A | 674 | Crystal Structure And Allosteric Activation Of Prot | 4e-08 | ||
| 2v7o_A | 336 | Crystal Structure Of Human Calcium-Calmodulin-Depen | 4e-08 | ||
| 1rdq_E | 350 | Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of | 5e-08 | ||
| 2i0e_A | 353 | Structure Of Catalytic Domain Of Human Protein Kina | 6e-08 | ||
| 2h34_A | 309 | Apoenzyme Crystal Structure Of The Tuberculosis Ser | 6e-08 | ||
| 1kob_A | 387 | Twitchin Kinase Fragment (Aplysia), Autoregulated P | 6e-08 | ||
| 4g3f_A | 336 | Crystal Structure Of Murine Nf-kappab Inducing Kina | 7e-08 | ||
| 4e7w_A | 394 | Structure Of Gsk3 From Ustilago Maydis Length = 394 | 7e-08 | ||
| 3v8s_A | 410 | Human Rho-Associated Protein Kinase 1 (Rock 1) In C | 8e-08 | ||
| 2jc6_A | 334 | Crystal Structure Of Human Calmodulin-Dependent Pro | 8e-08 | ||
| 4g3c_A | 352 | Crystal Structure Of Apo Murine Nf-kappab Inducing | 8e-08 | ||
| 2esm_A | 415 | Crystal Structure Of Rock 1 Bound To Fasudil Length | 9e-08 | ||
| 2v55_A | 406 | Mechanism Of Multi-site Phosphorylation From A Rock | 9e-08 | ||
| 3soa_A | 444 | Full-Length Human Camkii Length = 444 | 1e-07 | ||
| 3f3z_A | 277 | Crystal Structure Of Cryptosporidium Parvum Calcium | 1e-07 | ||
| 2qr7_A | 342 | 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of | 1e-07 | ||
| 4g3g_A | 350 | Crystal Structure Of Murine Nf-kappab Inducing Kina | 1e-07 | ||
| 2qg5_A | 294 | Cryptosporidium Parvum Calcium Dependent Protein Ki | 1e-07 | ||
| 1vzo_A | 355 | The Structure Of The N-Terminal Kinase Domain Of Ms | 1e-07 | ||
| 3lm0_A | 327 | Crystal Structure Of Human SerineTHREONINE KINASE 1 | 1e-07 | ||
| 2f2u_A | 402 | Crystal Structure Of The Rho-Kinase Kinase Domain L | 3e-07 | ||
| 3kmu_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 3e-07 | ||
| 3uc3_A | 361 | The Crystal Structure Of Snf1-Related Kinase 2.3 Le | 3e-07 | ||
| 3qd2_B | 332 | Crsytal Structure Of Mouse Perk Kinase Domain Lengt | 3e-07 | ||
| 3ujg_A | 361 | Crystal Structure Of Snrk2.6 In Complex With Hab1 L | 6e-07 | ||
| 3uc4_A | 362 | The Crystal Structure Of Snf1-Related Kinase 2.6 Le | 7e-07 | ||
| 3udb_A | 317 | Crystal Structure Of Snrk2.6 Length = 317 | 8e-07 | ||
| 3rp9_A | 458 | Crystal Structure Of The Apo Mapk From Toxoplasma G | 2e-06 | ||
| 3kvw_A | 429 | Crystal Structure Of Dual-Specificity Tyrosine Phos | 2e-06 | ||
| 4eut_A | 396 | Structure Of Bx-795 Complexed With Unphosphorylated | 2e-06 | ||
| 3kn5_A | 325 | Crystal Structure Of The C-Terminal Kinase Domain O | 2e-06 | ||
| 1a06_A | 332 | Calmodulin-Dependent Protein Kinase From Rat Length | 2e-06 | ||
| 3rny_A | 346 | Crystal Structure Of Human Rsk1 C-Terminal Kinase D | 2e-06 | ||
| 4azf_A | 417 | Human Dyrk2 In Complex With Leucettine L41 Length = | 2e-06 | ||
| 2wnt_A | 330 | Crystal Structure Of The Human Ribosomal Protein S6 | 2e-06 | ||
| 4fg7_A | 293 | Crystal Structure Of Human Calcium/calmodulin-depen | 3e-06 | ||
| 4fg8_A | 315 | Crystal Structure Of Human Calcium/calmodulin-depen | 3e-06 | ||
| 4fg9_A | 320 | Crystal Structure Of Human Calcium/calmodulin-depen | 3e-06 | ||
| 3qfv_A | 415 | Mrck Beta In Complex With Tpca-1 Length = 415 | 4e-06 | ||
| 3tku_A | 433 | Mrck Beta In Complex With Fasudil Length = 433 | 4e-06 | ||
| 3zuu_A | 362 | The Structure Of Ost1 (D160a, S175d) Kinase In Comp | 4e-06 | ||
| 3zut_A | 362 | The Structure Of Ost1 (D160a) Kinase Length = 362 | 5e-06 | ||
| 3mfr_A | 351 | Cask-4m Cam Kinase Domain, Native Length = 351 | 5e-06 | ||
| 4euu_A | 319 | Structure Of Bx-795 Complexed With Human Tbk1 Kinas | 5e-06 | ||
| 1z57_A | 339 | Crystal Structure Of Human Clk1 In Complex With 10z | 9e-06 | ||
| 3k2l_A | 429 | Crystal Structure Of Dual-Specificity Tyrosine Phos | 9e-06 | ||
| 3e3p_A | 360 | Glycogen Synthase Kinase From Leishmania Major Leng | 1e-05 | ||
| 2rio_A | 434 | Structure Of The Dual Enzyme Ire1 Reveals The Basis | 2e-05 | ||
| 3p23_A | 432 | Crystal Structure Of The Human Kinase And Rnase Dom | 4e-05 | ||
| 3fbv_A | 448 | Crystal Structure Of The Oligomer Formed By The Kin | 5e-05 | ||
| 3sdj_A | 448 | Structure Of Rnase-Inactive Point Mutant Of Oligome | 5e-05 | ||
| 2in6_A | 287 | Wee1 Kinase Complex With Inhibitor Pd311839 Length | 5e-05 | ||
| 2vag_A | 339 | Crystal Structure Of Di-Phosphorylated Human Clk1 I | 5e-05 | ||
| 1x8b_A | 289 | Structure Of Human Wee1a Kinase: Kinase Domain Comp | 5e-05 | ||
| 3bi6_A | 287 | Wee1 Kinase Complex With Inhibitor Pd352396 Length | 6e-05 | ||
| 2z2w_A | 285 | Humand Wee1 Kinase Complexed With Inhibitor Pf03357 | 6e-05 | ||
| 2pml_X | 348 | Crystal Structure Of Pfpk7 In Complex With An Atp A | 1e-04 | ||
| 2wtk_C | 305 | Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2 | 1e-04 | ||
| 3lj0_A | 434 | Ire1 Complexed With Adp And Quercetin Length = 434 | 1e-04 | ||
| 3llt_A | 360 | Crystal Structure Of Pf14_0431, Kinase Domain Lengt | 2e-04 | ||
| 3hmn_A | 342 | Crystal Structure Of Human Mps1 Catalytic Domain In | 4e-04 | ||
| 2x9e_A | 317 | Human Mps1 In Complex With Nms-P715 Length = 317 | 4e-04 | ||
| 2iwi_A | 312 | Crystal Structure Of The Human Pim2 In Complex With | 5e-04 | ||
| 3vqu_A | 320 | Crystal Structure Of Human Mps1 Catalytic Domain In | 5e-04 | ||
| 3dbq_A | 343 | Crystal Structure Of Ttk Kinase Domain Length = 343 | 5e-04 | ||
| 2zmc_A | 390 | Crystal Structure Of Human Mitotic Checkpoint Kinas | 5e-04 | ||
| 3cek_A | 313 | Crystal Structure Of Human Dual Specificity Protein | 5e-04 | ||
| 3tac_A | 361 | Crystal Structure Of The Liprin-AlphaCASK COMPLEX L | 6e-04 | ||
| 3h9f_A | 313 | Crystal Structure Of Human Dual Specificity Protein | 8e-04 | ||
| 3sv0_A | 483 | Crystal Structure Of Casein Kinase-1 Like Protein I | 9e-04 | ||
| 3c0g_A | 351 | Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len | 9e-04 |
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307 | Back alignment and structure |
|
| >pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318 | Back alignment and structure |
|
| >pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292 | Back alignment and structure |
|
| >pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308 | Back alignment and structure |
|
| >pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306 | Back alignment and structure |
|
| >pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309 | Back alignment and structure |
|
| >pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314 | Back alignment and structure |
|
| >pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322 | Back alignment and structure |
|
| >pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336 | Back alignment and structure |
|
| >pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308 | Back alignment and structure |
|
| >pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315 | Back alignment and structure |
|
| >pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299 | Back alignment and structure |
|
| >pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
| >pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303 | Back alignment and structure |
|
| >pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278 | Back alignment and structure |
|
| >pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328 | Back alignment and structure |
|
| >pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311 | Back alignment and structure |
|
| >pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338 | Back alignment and structure |
|
| >pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341 | Back alignment and structure |
|
| >pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311 | Back alignment and structure |
|
| >pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291 | Back alignment and structure |
|
| >pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311 | Back alignment and structure |
|
| >pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291 | Back alignment and structure |
|
| >pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276 | Back alignment and structure |
|
| >pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277 | Back alignment and structure |
|
| >pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676 | Back alignment and structure |
|
| >pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344 | Back alignment and structure |
|
| >pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367 | Back alignment and structure |
|
| >pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281 | Back alignment and structure |
|
| >pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281 | Back alignment and structure |
|
| >pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317 | Back alignment and structure |
|
| >pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656 | Back alignment and structure |
|
| >pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327 | Back alignment and structure |
|
| >pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315 | Back alignment and structure |
|
| >pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389 | Back alignment and structure |
|
| >pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327 | Back alignment and structure |
|
| >pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327 | Back alignment and structure |
|
| >pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344 | Back alignment and structure |
|
| >pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328 | Back alignment and structure |
|
| >pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329 | Back alignment and structure |
|
| >pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299 | Back alignment and structure |
|
| >pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656 | Back alignment and structure |
|
| >pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317 | Back alignment and structure |
|
| >pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328 | Back alignment and structure |
|
| >pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290 | Back alignment and structure |
|
| >pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303 | Back alignment and structure |
|
| >pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310 | Back alignment and structure |
|
| >pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313 | Back alignment and structure |
|
| >pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329 | Back alignment and structure |
|
| >pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316 | Back alignment and structure |
|
| >pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330 | Back alignment and structure |
|
| >pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333 | Back alignment and structure |
|
| >pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334 | Back alignment and structure |
|
| >pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306 | Back alignment and structure |
|
| >pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300 | Back alignment and structure |
|
| >pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306 | Back alignment and structure |
|
| >pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299 | Back alignment and structure |
|
| >pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327 | Back alignment and structure |
|
| >pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299 | Back alignment and structure |
|
| >pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334 | Back alignment and structure |
|
| >pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334 | Back alignment and structure |
|
| >pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324 | Back alignment and structure |
|
| >pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299 | Back alignment and structure |
|
| >pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316 | Back alignment and structure |
|
| >pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330 | Back alignment and structure |
|
| >pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327 | Back alignment and structure |
|
| >pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330 | Back alignment and structure |
|
| >pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327 | Back alignment and structure |
|
| >pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330 | Back alignment and structure |
|
| >pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309 | Back alignment and structure |
|
| >pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327 | Back alignment and structure |
|
| >pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317 | Back alignment and structure |
|
| >pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370 | Back alignment and structure |
|
| >pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316 | Back alignment and structure |
|
| >pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329 | Back alignment and structure |
|
| >pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361 | Back alignment and structure |
|
| >pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316 | Back alignment and structure |
|
| >pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318 | Back alignment and structure |
|
| >pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348 | Back alignment and structure |
|
| >pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365 | Back alignment and structure |
|
| >pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367 | Back alignment and structure |
|
| >pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353 | Back alignment and structure |
|
| >pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
| >pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337 | Back alignment and structure |
|
| >pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331 | Back alignment and structure |
|
| >pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307 | Back alignment and structure |
|
| >pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348 | Back alignment and structure |
|
| >pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360 | Back alignment and structure |
|
| >pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334 | Back alignment and structure |
|
| >pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370 | Back alignment and structure |
|
| >pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303 | Back alignment and structure |
|
| >pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297 | Back alignment and structure |
|
| >pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313 | Back alignment and structure |
|
| >pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379 | Back alignment and structure |
|
| >pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300 | Back alignment and structure |
|
| >pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362 | Back alignment and structure |
|
| >pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329 | Back alignment and structure |
|
| >pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298 | Back alignment and structure |
|
| >pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380 | Back alignment and structure |
|
| >pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365 | Back alignment and structure |
|
| >pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329 | Back alignment and structure |
|
| >pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315 | Back alignment and structure |
|
| >pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285 | Back alignment and structure |
|
| >pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296 | Back alignment and structure |
|
| >pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299 | Back alignment and structure |
|
| >pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299 | Back alignment and structure |
|
| >pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365 | Back alignment and structure |
|
| >pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359 | Back alignment and structure |
|
| >pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329 | Back alignment and structure |
|
| >pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360 | Back alignment and structure |
|
| >pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326 | Back alignment and structure |
|
| >pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336 | Back alignment and structure |
|
| >pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360 | Back alignment and structure |
|
| >pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367 | Back alignment and structure |
|
| >pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366 | Back alignment and structure |
|
| >pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289 | Back alignment and structure |
|
| >pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354 | Back alignment and structure |
|
| >pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293 | Back alignment and structure |
|
| >pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303 | Back alignment and structure |
|
| >pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362 | Back alignment and structure |
|
| >pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359 | Back alignment and structure |
|
| >pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348 | Back alignment and structure |
|
| >pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298 | Back alignment and structure |
|
| >pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362 | Back alignment and structure |
|
| >pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289 | Back alignment and structure |
|
| >pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350 | Back alignment and structure |
|
| >pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322 | Back alignment and structure |
|
| >pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379 | Back alignment and structure |
|
| >pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372 | Back alignment and structure |
|
| >pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298 | Back alignment and structure |
|
| >pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316 | Back alignment and structure |
|
| >pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366 | Back alignment and structure |
|
| >pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351 | Back alignment and structure |
|
| >pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395 | Back alignment and structure |
|
| >pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304 | Back alignment and structure |
|
| >pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366 | Back alignment and structure |
|
| >pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324 | Back alignment and structure |
|
| >pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281 | Back alignment and structure |
|
| >pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334 | Back alignment and structure |
|
| >pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308 | Back alignment and structure |
|
| >pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277 | Back alignment and structure |
|
| >pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286 | Back alignment and structure |
|
| >pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366 | Back alignment and structure |
|
| >pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294 | Back alignment and structure |
|
| >pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304 | Back alignment and structure |
|
| >pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314 | Back alignment and structure |
|
| >pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286 | Back alignment and structure |
|
| >pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286 | Back alignment and structure |
|
| >pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315 | Back alignment and structure |
|
| >pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327 | Back alignment and structure |
|
| >pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331 | Back alignment and structure |
|
| >pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312 | Back alignment and structure |
|
| >pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333 | Back alignment and structure |
|
| >pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301 | Back alignment and structure |
|
| >pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311 | Back alignment and structure |
|
| >pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312 | Back alignment and structure |
|
| >pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314 | Back alignment and structure |
|
| >pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354 | Back alignment and structure |
|
| >pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348 | Back alignment and structure |
|
| >pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372 | Back alignment and structure |
|
| >pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | Back alignment and structure |
|
| >pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341 | Back alignment and structure |
|
| >pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286 | Back alignment and structure |
|
| >pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310 | Back alignment and structure |
|
| >pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311 | Back alignment and structure |
|
| >pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311 | Back alignment and structure |
|
| >pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287 | Back alignment and structure |
|
| >pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311 | Back alignment and structure |
|
| >pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311 | Back alignment and structure |
|
| >pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298 | Back alignment and structure |
|
| >pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360 | Back alignment and structure |
|
| >pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311 | Back alignment and structure |
|
| >pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328 | Back alignment and structure |
|
| >pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322 | Back alignment and structure |
|
| >pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543 | Back alignment and structure |
|
| >pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543 | Back alignment and structure |
|
| >pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292 | Back alignment and structure |
|
| >pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325 | Back alignment and structure |
|
| >pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543 | Back alignment and structure |
|
| >pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290 | Back alignment and structure |
|
| >pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360 | Back alignment and structure |
|
| >pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311 | Back alignment and structure |
|
| >pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486 | Back alignment and structure |
|
| >pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543 | Back alignment and structure |
|
| >pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301 | Back alignment and structure |
|
| >pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311 | Back alignment and structure |
|
| >pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350 | Back alignment and structure |
|
| >pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299 | Back alignment and structure |
|
| >pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364 | Back alignment and structure |
|
| >pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302 | Back alignment and structure |
|
| >pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360 | Back alignment and structure |
|
| >pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300 | Back alignment and structure |
|
| >pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318 | Back alignment and structure |
|
| >pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464 | Back alignment and structure |
|
| >pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302 | Back alignment and structure |
|
| >pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507 | Back alignment and structure |
|
| >pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287 | Back alignment and structure |
|
| >pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364 | Back alignment and structure |
|
| >pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356 | Back alignment and structure |
|
| >pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508 | Back alignment and structure |
|
| >pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484 | Back alignment and structure |
|
| >pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423 | Back alignment and structure |
|
| >pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613 | Back alignment and structure |
|
| >pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355 | Back alignment and structure |
|
| >pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327 | Back alignment and structure |
|
| >pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292 | Back alignment and structure |
|
| >pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346 | Back alignment and structure |
|
| >pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362 | Back alignment and structure |
|
| >pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364 | Back alignment and structure |
|
| >pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363 | Back alignment and structure |
|
| >pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I Tgf-Beta Receptor In Complex With Fkbp12 Length = 342 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp Site Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365 | Back alignment and structure |
|
| >pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355 | Back alignment and structure |
|
| >pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542 Length = 309 | Back alignment and structure |
|
| >pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356 | Back alignment and structure |
|
| >pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3- Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine Length = 306 | Back alignment and structure |
|
| >pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317 | Back alignment and structure |
|
| >pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317 | Back alignment and structure |
|
| >pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327 | Back alignment and structure |
|
| >pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf- Beta Type I Receptor Length = 303 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348 | Back alignment and structure |
|
| >pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327 | Back alignment and structure |
|
| >pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369 | Back alignment and structure |
|
| >pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295 | Back alignment and structure |
|
| >pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371 | Back alignment and structure |
|
| >pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635 | Back alignment and structure |
|
| >pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328 | Back alignment and structure |
|
| >pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364 | Back alignment and structure |
|
| >pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327 | Back alignment and structure |
|
| >pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345 | Back alignment and structure |
|
| >pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327 | Back alignment and structure |
|
| >pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292 | Back alignment and structure |
|
| >pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284 | Back alignment and structure |
|
| >pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386 | Back alignment and structure |
|
| >pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299 | Back alignment and structure |
|
| >pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323 | Back alignment and structure |
|
| >pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484 | Back alignment and structure |
|
| >pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321 | Back alignment and structure |
|
| >pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322 | Back alignment and structure |
|
| >pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348 | Back alignment and structure |
|
| >pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276 | Back alignment and structure |
|
| >pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277 | Back alignment and structure |
|
| >pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360 | Back alignment and structure |
|
| >pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398 | Back alignment and structure |
|
| >pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297 | Back alignment and structure |
|
| >pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289 | Back alignment and structure |
|
| >pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295 | Back alignment and structure |
|
| >pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293 | Back alignment and structure |
|
| >pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273 | Back alignment and structure |
|
| >pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291 | Back alignment and structure |
|
| >pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274 | Back alignment and structure |
|
| >pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370 | Back alignment and structure |
|
| >pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278 | Back alignment and structure |
|
| >pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382 | Back alignment and structure |
|
| >pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358 | Back alignment and structure |
|
| >pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276 | Back alignment and structure |
|
| >pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315 | Back alignment and structure |
|
| >pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273 | Back alignment and structure |
|
| >pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476 | Back alignment and structure |
|
| >pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360 | Back alignment and structure |
|
| >pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360 | Back alignment and structure |
|
| >pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269 | Back alignment and structure |
|
| >pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360 | Back alignment and structure |
|
| >pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311 | Back alignment and structure |
|
| >pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273 | Back alignment and structure |
|
| >pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311 | Back alignment and structure |
|
| >pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364 | Back alignment and structure |
|
| >pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366 | Back alignment and structure |
|
| >pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357 | Back alignment and structure |
|
| >pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364 | Back alignment and structure |
|
| >pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358 | Back alignment and structure |
|
| >pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269 | Back alignment and structure |
|
| >pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | Back alignment and structure |
|
| >pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368 | Back alignment and structure |
|
| >pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368 | Back alignment and structure |
|
| >pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294 | Back alignment and structure |
|
| >pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362 | Back alignment and structure |
|
| >pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370 | Back alignment and structure |
|
| >pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353 | Back alignment and structure |
|
| >pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373 | Back alignment and structure |
|
| >pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494 | Back alignment and structure |
|
| >pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370 | Back alignment and structure |
|
| >pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285 | Back alignment and structure |
|
| >pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384 | Back alignment and structure |
|
| >pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689 | Back alignment and structure |
|
| >pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | Back alignment and structure |
|
| >pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688 | Back alignment and structure |
|
| >pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284 | Back alignment and structure |
|
| >pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689 | Back alignment and structure |
|
| >pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504 | Back alignment and structure |
|
| >pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695 | Back alignment and structure |
|
| >pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316 | Back alignment and structure |
|
| >pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289 | Back alignment and structure |
|
| >pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467 | Back alignment and structure |
|
| >pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446 | Back alignment and structure |
|
| >pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446 | Back alignment and structure |
|
| >pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353 | Back alignment and structure |
|
| >pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353 | Back alignment and structure |
|
| >pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342 | Back alignment and structure |
|
| >pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340 | Back alignment and structure |
|
| >pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305 | Back alignment and structure |
|
| >pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341 | Back alignment and structure |
|
| >pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289 | Back alignment and structure |
|
| >pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278 | Back alignment and structure |
|
| >pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | Back alignment and structure |
|
| >pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424 | Back alignment and structure |
|
| >pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414 | Back alignment and structure |
|
| >pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420 | Back alignment and structure |
|
| >pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359 | Back alignment and structure |
|
| >pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340 | Back alignment and structure |
|
| >pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353 | Back alignment and structure |
|
| >pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360 | Back alignment and structure |
|
| >pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430 | Back alignment and structure |
|
| >pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274 | Back alignment and structure |
|
| >pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356 | Back alignment and structure |
|
| >pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465 | Back alignment and structure |
|
| >pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275 | Back alignment and structure |
|
| >pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367 | Back alignment and structure |
|
| >pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290 | Back alignment and structure |
|
| >pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391 | Back alignment and structure |
|
| >pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12 An 193189 Length = 337 | Back alignment and structure |
|
| >pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320 | Back alignment and structure |
|
| >pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337 | Back alignment and structure |
|
| >pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349 | Back alignment and structure |
|
| >pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371 | Back alignment and structure |
|
| >pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In Complex With Staurosporine Length = 317 | Back alignment and structure |
|
| >pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350 | Back alignment and structure |
|
| >pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368 | Back alignment and structure |
|
| >pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382 | Back alignment and structure |
|
| >pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378 | Back alignment and structure |
|
| >pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366 | Back alignment and structure |
|
| >pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573 | Back alignment and structure |
|
| >pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352 | Back alignment and structure |
|
| >pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371 | Back alignment and structure |
|
| >pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353 | Back alignment and structure |
|
| >pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367 | Back alignment and structure |
|
| >pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350 | Back alignment and structure |
|
| >pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350 | Back alignment and structure |
|
| >pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345 | Back alignment and structure |
|
| >pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349 | Back alignment and structure |
|
| >pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352 | Back alignment and structure |
|
| >pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269 | Back alignment and structure |
|
| >pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350 | Back alignment and structure |
|
| >pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350 | Back alignment and structure |
|
| >pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353 | Back alignment and structure |
|
| >pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303 | Back alignment and structure |
|
| >pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284 | Back alignment and structure |
|
| >pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282 | Back alignment and structure |
|
| >pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491 | Back alignment and structure |
|
| >pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350 | Back alignment and structure |
|
| >pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432 | Back alignment and structure |
|
| >pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334 | Back alignment and structure |
|
| >pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335 | Back alignment and structure |
|
| >pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292 | Back alignment and structure |
|
| >pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339 | Back alignment and structure |
|
| >pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283 | Back alignment and structure |
|
| >pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315 | Back alignment and structure |
|
| >pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350 | Back alignment and structure |
|
| >pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279 | Back alignment and structure |
|
| >pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295 | Back alignment and structure |
|
| >pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294 | Back alignment and structure |
|
| >pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335 | Back alignment and structure |
|
| >pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336 | Back alignment and structure |
|
| >pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304 | Back alignment and structure |
|
| >pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279 | Back alignment and structure |
|
| >pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342 | Back alignment and structure |
|
| >pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334 | Back alignment and structure |
|
| >pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295 | Back alignment and structure |
|
| >pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336 | Back alignment and structure |
|
| >pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312 | Back alignment and structure |
|
| >pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285 | Back alignment and structure |
|
| >pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350 | Back alignment and structure |
|
| >pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278 | Back alignment and structure |
|
| >pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | Back alignment and structure |
|
| >pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337 | Back alignment and structure |
|
| >pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | Back alignment and structure |
|
| >pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298 | Back alignment and structure |
|
| >pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350 | Back alignment and structure |
|
| >pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330 | Back alignment and structure |
|
| >pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351 | Back alignment and structure |
|
| >pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295 | Back alignment and structure |
|
| >pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350 | Back alignment and structure |
|
| >pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350 | Back alignment and structure |
|
| >pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276 | Back alignment and structure |
|
| >pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326 | Back alignment and structure |
|
| >pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350 | Back alignment and structure |
|
| >pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301 | Back alignment and structure |
|
| >pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279 | Back alignment and structure |
|
| >pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351 | Back alignment and structure |
|
| >pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324 | Back alignment and structure |
|
| >pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336 | Back alignment and structure |
|
| >pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350 | Back alignment and structure |
|
| >pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351 | Back alignment and structure |
|
| >pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298 | Back alignment and structure |
|
| >pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350 | Back alignment and structure |
|
| >pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304 | Back alignment and structure |
|
| >pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371 | Back alignment and structure |
|
| >pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360 | Back alignment and structure |
|
| >pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276 | Back alignment and structure |
|
| >pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350 | Back alignment and structure |
|
| >pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350 | Back alignment and structure |
|
| >pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350 | Back alignment and structure |
|
| >pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350 | Back alignment and structure |
|
| >pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351 | Back alignment and structure |
|
| >pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373 | Back alignment and structure |
|
| >pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373 | Back alignment and structure |
|
| >pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350 | Back alignment and structure |
|
| >pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322 | Back alignment and structure |
|
| >pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371 | Back alignment and structure |
|
| >pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350 | Back alignment and structure |
|
| >pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350 | Back alignment and structure |
|
| >pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350 | Back alignment and structure |
|
| >pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351 | Back alignment and structure |
|
| >pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350 | Back alignment and structure |
|
| >pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345 | Back alignment and structure |
|
| >pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323 | Back alignment and structure |
|
| >pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337 | Back alignment and structure |
|
| >pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364 | Back alignment and structure |
|
| >pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316 | Back alignment and structure |
|
| >pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351 | Back alignment and structure |
|
| >pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371 | Back alignment and structure |
|
| >pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322 | Back alignment and structure |
|
| >pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298 | Back alignment and structure |
|
| >pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323 | Back alignment and structure |
|
| >pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437 | Back alignment and structure |
|
| >pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350 | Back alignment and structure |
|
| >pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351 | Back alignment and structure |
|
| >pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345 | Back alignment and structure |
|
| >pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329 | Back alignment and structure |
|
| >pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351 | Back alignment and structure |
|
| >pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277 | Back alignment and structure |
|
| >pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350 | Back alignment and structure |
|
| >pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331 | Back alignment and structure |
|
| >pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396 | Back alignment and structure |
|
| >pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350 | Back alignment and structure |
|
| >pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313 | Back alignment and structure |
|
| >pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350 | Back alignment and structure |
|
| >pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331 | Back alignment and structure |
|
| >pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329 | Back alignment and structure |
|
| >pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351 | Back alignment and structure |
|
| >pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351 | Back alignment and structure |
|
| >pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351 | Back alignment and structure |
|
| >pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365 | Back alignment and structure |
|
| >pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335 | Back alignment and structure |
|
| >pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371 | Back alignment and structure |
|
| >pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429 | Back alignment and structure |
|
| >pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327 | Back alignment and structure |
|
| >pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356 | Back alignment and structure |
|
| >pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351 | Back alignment and structure |
|
| >pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288 | Back alignment and structure |
|
| >pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290 | Back alignment and structure |
|
| >pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301 | Back alignment and structure |
|
| >pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351 | Back alignment and structure |
|
| >pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361 | Back alignment and structure |
|
| >pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319 | Back alignment and structure |
|
| >pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321 | Back alignment and structure |
|
| >pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321 | Back alignment and structure |
|
| >pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311 | Back alignment and structure |
|
| >pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419 | Back alignment and structure |
|
| >pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362 | Back alignment and structure |
|
| >pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443 | Back alignment and structure |
|
| >pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342 | Back alignment and structure |
|
| >pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362 | Back alignment and structure |
|
| >pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271 | Back alignment and structure |
|
| >pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674 | Back alignment and structure |
|
| >pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336 | Back alignment and structure |
|
| >pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353 | Back alignment and structure |
|
| >pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis SerineTHREONINE Kinase, Pkne Length = 309 | Back alignment and structure |
|
| >pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387 | Back alignment and structure |
|
| >pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336 | Back alignment and structure |
|
| >pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394 | Back alignment and structure |
|
| >pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410 | Back alignment and structure |
|
| >pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334 | Back alignment and structure |
|
| >pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352 | Back alignment and structure |
|
| >pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415 | Back alignment and structure |
|
| >pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406 | Back alignment and structure |
|
| >pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444 | Back alignment and structure |
|
| >pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277 | Back alignment and structure |
|
| >pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342 | Back alignment and structure |
|
| >pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350 | Back alignment and structure |
|
| >pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294 | Back alignment and structure |
|
| >pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355 | Back alignment and structure |
|
| >pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327 | Back alignment and structure |
|
| >pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402 | Back alignment and structure |
|
| >pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Apo) Length = 271 | Back alignment and structure |
|
| >pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361 | Back alignment and structure |
|
| >pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332 | Back alignment and structure |
|
| >pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361 | Back alignment and structure |
|
| >pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362 | Back alignment and structure |
|
| >pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317 | Back alignment and structure |
|
| >pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458 | Back alignment and structure |
|
| >pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429 | Back alignment and structure |
|
| >pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396 | Back alignment and structure |
|
| >pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325 | Back alignment and structure |
|
| >pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332 | Back alignment and structure |
|
| >pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346 | Back alignment and structure |
|
| >pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417 | Back alignment and structure |
|
| >pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330 | Back alignment and structure |
|
| >pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293 | Back alignment and structure |
|
| >pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315 | Back alignment and structure |
|
| >pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320 | Back alignment and structure |
|
| >pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415 | Back alignment and structure |
|
| >pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433 | Back alignment and structure |
|
| >pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362 | Back alignment and structure |
|
| >pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362 | Back alignment and structure |
|
| >pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351 | Back alignment and structure |
|
| >pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319 | Back alignment and structure |
|
| >pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339 | Back alignment and structure |
|
| >pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429 | Back alignment and structure |
|
| >pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360 | Back alignment and structure |
|
| >pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434 | Back alignment and structure |
|
| >pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432 | Back alignment and structure |
|
| >pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448 | Back alignment and structure |
|
| >pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448 | Back alignment and structure |
|
| >pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839 Length = 287 | Back alignment and structure |
|
| >pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339 | Back alignment and structure |
|
| >pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed With Inhibitor Pd0407824 Length = 289 | Back alignment and structure |
|
| >pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396 Length = 287 | Back alignment and structure |
|
| >pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770 Length = 285 | Back alignment and structure |
|
| >pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348 | Back alignment and structure |
|
| >pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305 | Back alignment and structure |
|
| >pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434 | Back alignment and structure |
|
| >pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain Length = 360 | Back alignment and structure |
|
| >pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342 | Back alignment and structure |
|
| >pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317 | Back alignment and structure |
|
| >pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312 | Back alignment and structure |
|
| >pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320 | Back alignment and structure |
|
| >pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343 | Back alignment and structure |
|
| >pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390 | Back alignment and structure |
|
| >pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313 | Back alignment and structure |
|
| >pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361 | Back alignment and structure |
|
| >pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313 | Back alignment and structure |
|
| >pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant Length = 483 | Back alignment and structure |
|
| >pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 897 | |||
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 1e-177 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 1e-176 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 1e-165 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 3e-93 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 2e-70 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 5e-69 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 7e-68 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 8e-68 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 3e-66 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 6e-66 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 2e-63 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 2e-63 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 5e-63 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 9e-63 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 1e-60 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 4e-60 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 4e-60 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 4e-58 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 8e-47 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 1e-43 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 1e-43 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 3e-43 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 4e-43 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 5e-43 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 7e-43 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 8e-43 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 1e-42 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 1e-42 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 1e-42 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 1e-42 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 2e-42 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 3e-42 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 4e-42 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 4e-42 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 6e-42 | |
| 3v5q_A | 297 | NT-3 growth factor receptor; kinase domain, kinase | 7e-42 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 9e-42 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 1e-41 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 1e-41 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 1e-41 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 1e-41 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 1e-41 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 2e-41 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 2e-41 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 3e-41 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 3e-41 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 3e-41 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 3e-41 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 3e-41 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 3e-41 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 4e-41 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 7e-41 | |
| 3zzw_A | 289 | Tyrosine-protein kinase transmembrane receptor RO; | 8e-41 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 1e-40 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 1e-40 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 1e-40 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 1e-40 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 2e-40 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 3e-40 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 3e-40 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 1e-39 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 1e-39 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 5e-39 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 5e-39 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 1e-38 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 1e-38 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 2e-38 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 3e-38 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 5e-38 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 5e-38 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 7e-38 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 9e-38 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 9e-38 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 1e-37 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 2e-37 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 2e-37 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 3e-37 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 3e-37 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 4e-37 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 5e-37 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 1e-36 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 2e-36 | |
| 4apc_A | 350 | Serine/threonine-protein kinase NEK1; transferase; | 5e-36 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 1e-35 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 2e-35 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 3e-35 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 7e-35 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 2e-34 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 2e-34 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 4e-34 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 4e-34 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 9e-34 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 1e-33 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 3e-33 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 5e-33 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 1e-32 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 1e-32 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 2e-32 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 2e-32 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 6e-32 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 8e-32 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 1e-30 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 3e-30 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 4e-30 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 8e-30 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 1e-29 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 5e-29 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 5e-29 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 6e-29 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 7e-29 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 8e-29 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 3e-28 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 4e-28 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 8e-28 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 1e-27 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 1e-27 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 2e-27 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 2e-27 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 3e-27 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 3e-27 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 4e-27 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 5e-27 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 6e-27 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 8e-27 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 1e-26 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 1e-26 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 2e-26 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 3e-26 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 5e-26 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 5e-26 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 6e-26 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 6e-26 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 7e-26 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 8e-26 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 8e-26 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 8e-26 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 1e-25 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 1e-25 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 2e-25 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 2e-25 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 2e-25 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 2e-25 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 3e-25 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 3e-25 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 4e-25 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 4e-25 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 4e-25 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 4e-25 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 7e-25 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 7e-25 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 1e-24 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 2e-24 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 2e-24 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 2e-24 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 2e-24 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 3e-24 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 4e-24 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 6e-24 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 2e-23 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 2e-23 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 2e-23 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 2e-23 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 2e-23 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 2e-23 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 2e-23 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 3e-23 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 4e-23 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 4e-23 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 6e-23 | |
| 1uu3_A | 310 | HPDK1, 3-phosphoinositide dependent protein kinase | 6e-23 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 1e-22 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 1e-22 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 1e-22 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 3e-22 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 3e-22 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 4e-22 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 6e-22 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 7e-22 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 1e-21 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 2e-21 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 3e-21 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 3e-21 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 4e-21 | |
| 3pvu_A | 695 | Beta-adrenergic receptor kinase 1; transferase, se | 4e-21 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 6e-21 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 1e-20 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 1e-20 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 1e-20 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 1e-20 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 1e-20 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 1e-20 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 2e-20 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 2e-20 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 2e-20 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 2e-20 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 4e-20 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 5e-20 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 7e-20 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 7e-20 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 9e-20 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 2e-19 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 3e-19 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 6e-19 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 7e-19 | |
| 3g51_A | 325 | Ribosomal protein S6 kinase alpha-3; N-terminal ki | 9e-19 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 1e-18 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 1e-18 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 2e-18 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 7e-18 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 4e-17 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 7e-17 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 1e-16 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 4e-16 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 6e-16 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 2e-15 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 2e-15 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 2e-15 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 3e-15 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 5e-15 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 6e-15 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 1e-14 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 1e-14 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 1e-14 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 1e-14 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 2e-14 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 4e-14 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 4e-14 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 2e-13 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 8e-13 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 1e-12 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 5e-12 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 1e-11 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 1e-11 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 3e-11 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 3e-10 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 4e-10 | |
| 1twf_A | 1733 | B220, DNA-directed RNA polymerase II largest subun | 6e-10 | |
| 1twf_A | 1733 | B220, DNA-directed RNA polymerase II largest subun | 8e-09 | |
| 1twf_A | 1733 | B220, DNA-directed RNA polymerase II largest subun | 3e-05 | |
| 3h0g_A | 1752 | DNA-directed RNA polymerase II subunit RPB1; trans | 3e-09 | |
| 3h0g_A | 1752 | DNA-directed RNA polymerase II subunit RPB1; trans | 3e-07 | |
| 3h0g_A | 1752 | DNA-directed RNA polymerase II subunit RPB1; trans | 2e-06 | |
| 3h0g_A | 1752 | DNA-directed RNA polymerase II subunit RPB1; trans | 1e-05 | |
| 3dzy_A | 467 | Retinoic acid receptor RXR-alpha; DNA-binding, HOS | 5e-05 | |
| 3dzy_A | 467 | Retinoic acid receptor RXR-alpha; DNA-binding, HOS | 9e-04 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 8e-05 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 2e-04 |
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 514 bits (1325), Expect = e-177
Identities = 123/310 (39%), Positives = 173/310 (55%), Gaps = 4/310 (1%)
Query: 466 SMLSSSSVSIDSCAVTYTGTAKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGRE 525
S ++S S + + L D+E+ATN F +IG G FG VY+G+L DG +
Sbjct: 6 SKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAK 65
Query: 526 VAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESH 585
VA+K + G EF E+E LS H +LV L G C E N L+Y+ + NG+L+ H
Sbjct: 66 VALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRH 125
Query: 586 LHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSD 645
L+G D + W+ R++I +GAARGL YLH + +IHRD KS NILL+ +F PK++D
Sbjct: 126 LYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITD 182
Query: 646 FGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 705
FG+++ + H+ST V GT GY+ PEY + G L KSDVYS+GVVL E+L R +
Sbjct: 183 FGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIV 242
Query: 706 LSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRP 765
S P NL WA L+ I+DP + I ++L K A C+ RP
Sbjct: 243 QSLPREMVNLAEWAVESH-NNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRP 301
Query: 766 FMGEVVQALK 775
MG+V+ L+
Sbjct: 302 SMGDVLWKLE 311
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 510 bits (1315), Expect = e-176
Identities = 126/297 (42%), Positives = 185/297 (62%), Gaps = 5/297 (1%)
Query: 482 YTGTAKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGG-R 540
+ G K F+L +++ A++ F I+G GGFG VY+G L DG VAVK LK GG
Sbjct: 13 HLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGEL 72
Query: 541 EFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDA 600
+F E+EM+S HRNL++L G C+ R LVY + NGS+ S L + PLDW
Sbjct: 73 QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPK 132
Query: 601 RMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHI 660
R +IALG+ARGLAYLH+ P++IHRD K++NILL+ +F V DFGLA+ +D + H+
Sbjct: 133 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL-MDYKDTHV 191
Query: 661 STHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQE--NLVAW 718
+T V GT G++APEY TG K+DV+ YGV+LLEL+TG++ DL++ + L+ W
Sbjct: 192 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW 251
Query: 719 ARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775
+ LL K+ L+ ++D ++ N + + ++ +A +C Q RP M EVV+ L+
Sbjct: 252 VKGLLKEKK-LEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 483 bits (1245), Expect = e-165
Identities = 105/303 (34%), Positives = 168/303 (55%), Gaps = 19/303 (6%)
Query: 483 TGTAKTFTLNDIEKATNGFH------TSRIIGEGGFGVVYRGILDDGREVAVKVLK---- 532
+F+ +++ TN F +GEGGFGVVY+G ++ VAVK L
Sbjct: 9 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAMVD 67
Query: 533 RANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKV 592
+ ++F E++++++ H NLV+L G + ++ CLVY + NGSL L D
Sbjct: 68 ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG- 126
Query: 593 NGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTA 652
PL W R KIA GAA G+ +LHE+ IHRD KS+NILL+ FT K+SDFGLAR +
Sbjct: 127 TPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILLDEAFTAKISDFGLARAS 183
Query: 653 LDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQ 712
+++ ++GT Y+APE + G + KSD+YS+GVVLLE++TG VD + P
Sbjct: 184 EKFAQTVMTSRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP-- 240
Query: 713 ENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772
+ L+ + ++ ++ ID + + ++ + ++AS C+ + + RP + +V Q
Sbjct: 241 QLLLDIKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299
Query: 773 ALK 775
L+
Sbjct: 300 LLQ 302
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 296 bits (759), Expect = 3e-93
Identities = 68/309 (22%), Positives = 115/309 (37%), Gaps = 30/309 (9%)
Query: 489 FTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEM 548
++ + + G FG V++ L VAVK+ ++ + E+
Sbjct: 14 LGTENLYFQSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQS-WQNEYEVYS 71
Query: 549 LSRLHHRNLVKLFGVCIEDNN----RCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKI 604
L + H N+++ G + L+ GSL L + W+ I
Sbjct: 72 LPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLK-----ANVVSWNELCHI 126
Query: 605 ALGAARGLAYLHED-------SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN 657
A ARGLAYLHED P + HRD KS N+LL+++ T ++DFGLA +
Sbjct: 127 AETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKS 186
Query: 658 KHISTHVMGTFGYLAPEYAMTGHLL-----VKSDVYSYGVVLLELLTGRKPVDLSQPPGQ 712
+ +GT Y+APE ++ D+Y+ G+VL EL + D
Sbjct: 187 AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYM 246
Query: 713 ENLVAWARPLLTTKEGLKTII-----DPVIESNISYD-TLVKVAAIASMCVQPEVSHRPF 766
+ E ++ ++ PV+ + + C + R
Sbjct: 247 LPFEEEI-GQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLS 305
Query: 767 MGEVVQALK 775
G V + +
Sbjct: 306 AGCVGERIT 314
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 235 bits (601), Expect = 2e-70
Identities = 70/332 (21%), Positives = 123/332 (37%), Gaps = 43/332 (12%)
Query: 489 FTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEM 548
++ + +IG G +G VY+G LD R VAVKV AN+ + F+ E +
Sbjct: 3 AAASEPSLDLDNLKLLELIGRGRYGAVYKGSLD-ERPVAVKVFSFANR---QNFINEKNI 58
Query: 549 --LSRLHHRNLVKLFGVCIEDN-----NRCLVYELIHNGSLESHLHGDDKVNGPLDWDAR 601
+ + H N+ + LV E NGSL +L DW +
Sbjct: 59 YRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLH-----TSDWVSS 113
Query: 602 MKIALGAARGLAYLHED------SSPRVIHRDFKSSNILLEHDFTPKVSDFGLART---- 651
++A RGLAYLH + P + HRD S N+L+++D T +SDFGL+
Sbjct: 114 CRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGN 173
Query: 652 --ALDEGNKHISTHVMGTFGYLAPEYAM-------TGHLLVKSDVYSYGVVLLELLTGRK 702
+ + +GT Y+APE L + D+Y+ G++ E+
Sbjct: 174 RLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCT 233
Query: 703 PVDLSQPPGQENLV-AWARPLLTTKEGLKTIID-----PVIESNISYD--TLVKVAAIAS 754
+ + + + T E ++ ++ P + + +
Sbjct: 234 DLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIE 293
Query: 755 MCVQPEVSHRPFMGEVVQALKLVCNEFDETKE 786
C + R + + + ++ K
Sbjct: 294 DCWDQDAEARLTAQXAEERMAELMMIWERNKS 325
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 230 bits (589), Expect = 5e-69
Identities = 91/284 (32%), Positives = 129/284 (45%), Gaps = 33/284 (11%)
Query: 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGG--REFLAELEMLSRLHHRNLVKLFG 562
IG G FG V+R G +VAVK+L + H EFL E+ ++ RL H N+V G
Sbjct: 43 EKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 563 VCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPR 622
+ N +V E + GSL LH LD R+ +A A+G+ YLH +P
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLH-KSGAREQLDERRRLSMAYDVAKGMNYLHN-RNPP 159
Query: 623 VIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLL 682
++HR+ KS N+L++ +T KV DFGL+R S GT ++APE
Sbjct: 160 IVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLS--SKSAAGTPEWMAPEVLRDEPSN 217
Query: 683 VKSDVYSYGVVLLELLTGRKP-VDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESN- 740
KSDVYS+GV+L EL T ++P +L+ P Q V A V
Sbjct: 218 EKSDVYSFGVILWELATLQQPWGNLN--PAQ---VVAA----------------VGFKCK 256
Query: 741 ---ISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNEF 781
I + +VAAI C E RP ++ L+ +
Sbjct: 257 RLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 227 bits (581), Expect = 7e-68
Identities = 84/295 (28%), Positives = 139/295 (47%), Gaps = 43/295 (14%)
Query: 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVC 564
++G G FGVV + ++VA+K ++ ++ + F+ EL LSR++H N+VKL+G C
Sbjct: 14 EVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 565 IEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVI 624
+ N CLV E GSL + LHG + M L ++G+AYLH +I
Sbjct: 71 L--NPVCLVMEYAEGGSLYNVLHGA-EPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 127
Query: 625 HRDFKSSNILL-EHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLV 683
HRD K N+LL K+ DFG A + T+ G+ ++APE +
Sbjct: 128 HRDLKPPNLLLVAGGTVLKICDFGTACD-----IQTHMTNNKGSAAWMAPEVFEGSNYSE 182
Query: 684 KSDVYSYGVVLLELLTGRKP-VDLSQPPGQENLVAWA-----RPLL--TTKEGLKTIIDP 735
K DV+S+G++L E++T RKP ++ P + + WA RP L + +++++
Sbjct: 183 KCDVFSWGIILWEVITRRKPFDEIGGPAFR---IMWAVHNGTRPPLIKNLPKPIESLM-- 237
Query: 736 VIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNEFDETKETIES 790
+ C + S RP M E+V+ + + F E ++
Sbjct: 238 ------------------TRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQY 274
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 226 bits (579), Expect = 8e-68
Identities = 76/291 (26%), Positives = 131/291 (45%), Gaps = 50/291 (17%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGG-------REFLAELEMLSRLHHRN 556
+ IG+GGFG+V++G + D VA+K L + G +EF E+ ++S L+H N
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 557 LVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLH 616
+VKL+G+ N +V E + G L L P+ W ++++ L A G+ Y+
Sbjct: 85 IVKLYGLMH--NPPRMVMEFVPCGDLYHRLL---DKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 617 EDSSPRVIHRDFKSSNILL-----EHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYL 671
+ +P ++HRD +S NI L KV+DFGL++ + H + ++G F ++
Sbjct: 140 -NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ-----SVHSVSGLLGNFQWM 193
Query: 672 APEYAMTGHLLV--KSDVYSYGVVLLELLTGRKP-VDLSQPPGQENLVAWARPLLTTKEG 728
APE K+D YS+ ++L +LTG P + S +
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK---------------- 237
Query: 729 LKTIIDPVIESN----ISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775
I+ + E I D ++ + +C + RP +V+ L
Sbjct: 238 ---FINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 221 bits (566), Expect = 3e-66
Identities = 68/287 (23%), Positives = 120/287 (41%), Gaps = 42/287 (14%)
Query: 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGG--REFLAELEMLSRLHHRNLVKLFG 562
+ E G +++G G ++ VKVLK + R+F E L H N++ + G
Sbjct: 16 TKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLG 74
Query: 563 VCIE--DNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSS 620
C + L+ + GSL + LH + N +D +K AL ARG+A+LH
Sbjct: 75 ACQSPPAPHPTLITHWMPYGSLYNVLH--EGTNFVVDQSQAVKFALDMARGMAFLH-TLE 131
Query: 621 PRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPE------ 674
P + S +++++ D T ++S + + S M ++APE
Sbjct: 132 PLIPRHALNSRSVMIDEDMTARISMADVKFS-------FQSPGRMYAPAWVAPEALQKKP 184
Query: 675 YAMTGHLLVKSDVYSYGVVLLELLTGRKP-VDLSQPPGQENLVAWARPLLTTKEGLKTII 733
+D++S+ V+L EL+T P DLS + + EGL+
Sbjct: 185 EDTNRR---SADMWSFAVLLWELVTREVPFADLS--NME---IGMK----VALEGLR--- 229
Query: 734 DPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNE 780
P I IS V+ + +C+ + + RP +V L+ + ++
Sbjct: 230 -PTIPPGIS----PHVSKLMKICMNEDPAKRPKFDMIVPILEKMQDK 271
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 220 bits (564), Expect = 6e-66
Identities = 87/288 (30%), Positives = 121/288 (42%), Gaps = 48/288 (16%)
Query: 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGG----REFLAELEMLSRLHHRNLVKL 560
IIG GGFG VYR G EVAVK + E ++ + L H N++ L
Sbjct: 13 EIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 561 FGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSS 620
GVC+++ N CLV E G L L G + D + A+ ARG+ YLH+++
Sbjct: 72 RGVCLKEPNLCLVMEFARGGPLNRVLSGK-----RIPPDILVNWAVQIARGMNYLHDEAI 126
Query: 621 PRVIHRDFKSSNILLEHDFTP--------KVSDFGLARTALDEGNKHISTHVMGTFGYLA 672
+IHRD KSSNIL+ K++DFGLAR E ++ G + ++A
Sbjct: 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR----EWHRTTKMSAAGAYAWMA 182
Query: 673 PEYAMTGHLLVKSDVYSYGVVLLELLTGRKP-VDLSQPPGQENLVAWARPLLTTKEGLKT 731
PE SDV+SYGV+L ELLTG P + VA+
Sbjct: 183 PEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID--GLA---VAYG------------ 225
Query: 732 IIDPVIESN----ISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775
V + I A + C P+ RP ++ L
Sbjct: 226 ----VAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLT 269
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 214 bits (548), Expect = 2e-63
Identities = 74/282 (26%), Positives = 118/282 (41%), Gaps = 38/282 (13%)
Query: 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGG--REFLAELEMLSRLHHRNLVKLFG 562
+ IG G FG VY+G +VAVK+L + F E+ +L + H N++ G
Sbjct: 30 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 563 VCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPR 622
+V + SL HLH + + IA ARG+ YLH +
Sbjct: 88 YSTAPQ-LAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQTARGMDYLH---AKS 140
Query: 623 VIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPE---YAMTG 679
+IHRD KS+NI L D T K+ DFGLA H + G+ ++APE +
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 680 HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWA------RPLLTTKEGLKTII 733
+SDVY++G+VL EL+TG+ P Q + P L
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIEMVGRGSLSPDL---------- 247
Query: 734 DPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775
S + + ++ + + C++ + RP ++ ++
Sbjct: 248 -----SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 215 bits (550), Expect = 2e-63
Identities = 61/290 (21%), Positives = 107/290 (36%), Gaps = 49/290 (16%)
Query: 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGG--REFLAELEMLSRLHHRNLVKLFG 562
+IG+G FG VY G EVA++++ + + F E+ + H N+V G
Sbjct: 39 ELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 563 VCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPR 622
C+ + ++ L +L S + LD + +IA +G+ YLH +
Sbjct: 97 ACMSPPHLAIITSLCKGRTLYSVVRDAKI---VLDVNKTRQIAQEIVKGMGYLH---AKG 150
Query: 623 VIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVM---GTFGYLAPEYAMTG 679
++H+D KS N+ ++ ++DFGL + + G +LAPE
Sbjct: 151 ILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQL 209
Query: 680 HLLV---------KSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWA-----RPLLTT 725
SDV++ G + EL P +QP + W +P L
Sbjct: 210 SPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFK-TQPAEA---IIWQMGTGMKPNL-- 263
Query: 726 KEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775
+++ I C E RP +++ L+
Sbjct: 264 ---------------SQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLE 298
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 213 bits (545), Expect = 9e-63
Identities = 68/287 (23%), Positives = 112/287 (39%), Gaps = 40/287 (13%)
Query: 505 RIIGEGGFGVVYRGIL-DDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGV 563
++G+G FG + + G + +K L R ++ R FL E++++ L H N++K GV
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 564 CIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRV 623
+D + E I G+L + ++ W R+ A A G+AYLH S +
Sbjct: 76 LYKDKRLNFITEYIKGGTLRGIIK---SMDSQYPWSQRVSFAKDIASGMAYLH---SMNI 129
Query: 624 IHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN------------KHISTHVMGTFGYL 671
IHRD S N L+ + V+DFGLAR +DE + V+G ++
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 672 APEYAMTGHLLVKSDVYSYGVVLLELLTGRKP---VDLSQPPGQENLVAWARPLLTTKEG 728
APE K DV+S+G+VL E++ N+ +
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRY------ 243
Query: 729 LKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775
+ I C + RP ++ L+
Sbjct: 244 ------------CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLE 278
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 206 bits (525), Expect = 4e-60
Identities = 70/298 (23%), Positives = 120/298 (40%), Gaps = 40/298 (13%)
Query: 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEM--LSRLHHRNLVKLFG 562
+G+G +G V+RG G VAVK+ ++ + + E E+ L H N++
Sbjct: 14 ECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIA 69
Query: 563 VCIEDNNR----CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHED 618
+ + L+ GSL +L LD + ++I L A GLA+LH +
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHIE 124
Query: 619 -----SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH--ISTHVMGTFGYL 671
P + HRD KS NIL++ + ++D GLA N+ + +GT Y+
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 672 APE------YAMTGHLLVKSDVYSYGVVLLELLTGRKP---VDLSQPPGQENLVAWARPL 722
APE + D++++G+VL E+ V+ +PP +
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYD----VVPND 240
Query: 723 LTTKEGLKTIID----PVIESNISYD-TLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775
+ ++ K + P I + D TL +A + C S R + + L
Sbjct: 241 PSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLT 298
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 207 bits (528), Expect = 4e-60
Identities = 74/306 (24%), Positives = 128/306 (41%), Gaps = 42/306 (13%)
Query: 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEM--LSRLHHRNLVKLFG 562
+ IG+G +G V+ G G +VAVKV + + E E+ + H N++
Sbjct: 43 KQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEE---ASWFRETEIYQTVLMRHENILGFIA 98
Query: 563 VCIEDNNR----CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHED 618
I+ L+ + NGSL +L + LD + +K+A + GL +LH +
Sbjct: 99 ADIKGTGSWTQLYLITDYHENGSLYDYLK-----STTLDAKSMLKLAYSSVSGLCHLHTE 153
Query: 619 -----SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH--ISTHVMGTFGYL 671
P + HRD KS NIL++ + T ++D GLA + + N+ +GT Y+
Sbjct: 154 IFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYM 213
Query: 672 APE------YAMTGHLLVKSDVYSYGVVLLELLTGRKP---VDLSQPPGQENLVAWARPL 722
PE + +D+YS+G++L E+ V+ Q P +LV P
Sbjct: 214 PPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLP-YHDLV----PS 268
Query: 723 LTTKEGLKTIID-----PVIESNISYD-TLVKVAAIASMCVQPEVSHRPFMGEVVQALKL 776
+ E ++ I+ P + S D L ++ + + C + R V + L
Sbjct: 269 DPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAK 328
Query: 777 VCNEFD 782
+ D
Sbjct: 329 MSESQD 334
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 201 bits (514), Expect = 4e-58
Identities = 76/302 (25%), Positives = 126/302 (41%), Gaps = 36/302 (11%)
Query: 506 IIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEM--LSRLHHRNLVKLFGV 563
IG+G FG V+RG G EVAVK+ + R + E E+ L H N++
Sbjct: 49 SIGKGRFGEVWRGKWR-GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAA 104
Query: 564 CIEDNNR----CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHED- 618
+DN LV + +GSL +L+ + + +K+AL A GLA+LH +
Sbjct: 105 DNKDNGTWTQLWLVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLHMEI 159
Query: 619 ----SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN--KHISTHVMGTFGYLA 672
P + HRD KS NIL++ + T ++D GLA + H +GT Y+A
Sbjct: 160 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 219
Query: 673 PEYAMTGHLLV-------KSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTT 725
PE + + + ++D+Y+ G+V E+ R + Q +
Sbjct: 220 PE-VLDDSINMKHFESFKRADIYAMGLVFWEIAR-RCSIGGIHEDYQLPYYDLVPSDPSV 277
Query: 726 KEGLKTIID----PVIESNI-SYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNE 780
+E K + + P I + S + L +A I C + R + + L + +
Sbjct: 278 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337
Query: 781 FD 782
Sbjct: 338 EG 339
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 170 bits (434), Expect = 8e-47
Identities = 61/204 (29%), Positives = 92/204 (45%), Gaps = 13/204 (6%)
Query: 505 RIIGEGGFGVVYRGIL-DDGREVAVKVLKR-ANQHGGREFLAELEMLSRLHHRNLVKLFG 562
IG G FG V+ G L D VAVK + +FL E +L + H N+V+L G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 563 VCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPR 622
VC + +V EL+ G + L + L +++ AA G+ YL
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEG---ARLRVKTLLQMVGDAAAGMEYLESK---C 233
Query: 623 VIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGY--LAPEYAMTGH 680
IHRD + N L+ K+SDFG++R D + ++ + APE G
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSREEAD--GVYAASGGLRQVPVKWTAPEALNYGR 291
Query: 681 LLVKSDVYSYGVVLLELLT-GRKP 703
+SDV+S+G++L E + G P
Sbjct: 292 YSSESDVWSFGILLWETFSLGASP 315
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 159 bits (404), Expect = 1e-43
Identities = 67/204 (32%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 505 RIIGEGGFGVVYRGILD-----DGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVK 559
+ +G+G FG V D G VAVK L+ + + R+F E+E+L L H N+VK
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 560 LFGVCIEDNNR--CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHE 617
GVC R L+ E + GSL +L +D ++ +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQICKGMEYL-- 130
Query: 618 DSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTF--GYLAPEY 675
+ R IHRD + NIL+E++ K+ DFGL + L + + G + APE
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEFFKVKEPGESPIFWYAPES 188
Query: 676 AMTGHLLVKSDVYSYGVVLLELLT 699
V SDV+S+GVVL EL T
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 158 bits (401), Expect = 1e-43
Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 13/202 (6%)
Query: 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVC 564
+ IG G FG+V+ G + +VA+K ++ +F+ E E++ +L H LV+L+GVC
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 565 IEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVI 624
+E CLV E + +G L +L G + + + L G+AYL VI
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYL---EEACVI 126
Query: 625 HRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGY--LAPEYAMTGHLL 682
HRD + N L+ + KVSDFG+ R LD+ + F +PE
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT---SSTGTKFPVKWASPEVFSFSRYS 183
Query: 683 VKSDVYSYGVVLLELLT-GRKP 703
KSDV+S+GV++ E+ + G+ P
Sbjct: 184 SKSDVWSFGVLMWEVFSEGKIP 205
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 158 bits (401), Expect = 3e-43
Identities = 66/220 (30%), Positives = 107/220 (48%), Gaps = 18/220 (8%)
Query: 505 RIIGEGGFGVVYRGILD-----DGREVAVKVLKR-ANQHGGREFLAELEMLSRLHHRNLV 558
R +GEG FG V D G +VAVK LK + + + E+E+L L+H N+V
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 86
Query: 559 KLFGVCIEDNNR--CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLH 616
K G+C ED L+ E + +GSL+ +L + ++ ++K A+ +G+ YL
Sbjct: 87 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK---NKINLKQQLKYAVQICKGMDYL- 142
Query: 617 EDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTF--GYLAPE 674
S + +HRD + N+L+E + K+ DFGL + A++ ++ + + APE
Sbjct: 143 --GSRQYVHRDLAARNVLVESEHQVKIGDFGLTK-AIETDKEYYTVKDDRDSPVFWYAPE 199
Query: 675 YAMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQE 713
M + SDV+S+GV L ELLT +
Sbjct: 200 CLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKM 239
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 156 bits (398), Expect = 4e-43
Identities = 64/203 (31%), Positives = 102/203 (50%), Gaps = 15/203 (7%)
Query: 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVC 564
+ +G G FGVV G +VAVK++K + EF E + + +L H LVK +GVC
Sbjct: 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE-DEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 565 IEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVI 624
++ +V E I NG L ++L L+ +++ G+A+L S + I
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRSHG---KGLEPSQLLEMCYDVCEGMAFL---ESHQFI 126
Query: 625 HRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGT---FGYLAPEYAMTGHL 681
HRD + N L++ D KVSDFG+ R LD+ +GT + APE
Sbjct: 127 HRDLAARNCLVDRDLCVKVSDFGMTRYVLDD----QYVSSVGTKFPVKWSAPEVFHYFKY 182
Query: 682 LVKSDVYSYGVVLLELLT-GRKP 703
KSDV+++G+++ E+ + G+ P
Sbjct: 183 SSKSDVWAFGILMWEVFSLGKMP 205
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 158 bits (402), Expect = 5e-43
Identities = 54/206 (26%), Positives = 102/206 (49%), Gaps = 14/206 (6%)
Query: 505 RIIGEGGFGVVYRGILDDGRE-----VAVKVLKR-ANQHGGREFLAELEMLSRLHHRNLV 558
+++G G FG VY+G+ E VA+K L+ + +E L E +++ + + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 559 KLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHED 618
+L G+C+ L+ +L+ G L ++ + + + A+G+ YL
Sbjct: 81 RLLGICLTS-TVQLITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQIAKGMNYL--- 133
Query: 619 SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMT 678
R++HRD + N+L++ K++DFGLA+ E ++ + ++A E +
Sbjct: 134 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 679 GHLLVKSDVYSYGVVLLELLT-GRKP 703
+SDV+SYGV + EL+T G KP
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTFGSKP 219
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 157 bits (400), Expect = 7e-43
Identities = 67/204 (32%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 505 RIIGEGGFGVVYRGILD-----DGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVK 559
+ +G+G FG V D G VAVK L+ + + R+F E+E+L L H N+VK
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 560 LFGVCIEDNNR--CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHE 617
GVC R L+ E + GSL +L +D ++ +G+ YL
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQICKGMEYL-- 161
Query: 618 DSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTF--GYLAPEY 675
+ R IHRD + NIL+E++ K+ DFGL + L + ++ G + APE
Sbjct: 162 -GTKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEYYKVKEPGESPIFWYAPES 219
Query: 676 AMTGHLLVKSDVYSYGVVLLELLT 699
V SDV+S+GVVL EL T
Sbjct: 220 LTESKFSVASDVWSFGVVLYELFT 243
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 156 bits (397), Expect = 8e-43
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVC 564
+ +G G FGVV G +VA+K++K + EF+ E +++ L H LV+L+GVC
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 565 IEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVI 624
+ ++ E + NG L ++L +++ + YL S + +
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLREMR---HRFQTQQLLEMCKDVCEAMEYL---ESKQFL 142
Query: 625 HRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGY--LAPEYAMTGHLL 682
HRD + N L+ KVSDFGL+R LD+ ++ V F PE M
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDD---EYTSSVGSKFPVRWSPPEVLMYSKFS 199
Query: 683 VKSDVYSYGVVLLELLT-GRKP 703
KSD++++GV++ E+ + G+ P
Sbjct: 200 SKSDIWAFGVLMWEIYSLGKMP 221
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 156 bits (396), Expect = 1e-42
Identities = 68/203 (33%), Positives = 99/203 (48%), Gaps = 19/203 (9%)
Query: 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVC 564
+ IG+G FG V G G +VAVK +K + FLAE ++++L H NLV+L GV
Sbjct: 27 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 565 IEDNNR-CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRV 623
+E+ +V E + GSL +L + L D +K +L + YL
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYL---EGNNF 138
Query: 624 IHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGY--LAPEYAMTGHL 681
+HRD + N+L+ D KVSDFGL + + ST G APE
Sbjct: 139 VHRDLAARNVLVSEDNVAKVSDFGLTK---EA----SSTQDTGKLPVKWTAPEALREKKF 191
Query: 682 LVKSDVYSYGVVLLELLT-GRKP 703
KSDV+S+G++L E+ + GR P
Sbjct: 192 STKSDVWSFGILLWEIYSFGRVP 214
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 157 bits (399), Expect = 1e-42
Identities = 68/238 (28%), Positives = 101/238 (42%), Gaps = 19/238 (7%)
Query: 505 RIIGEGGFGVVYRGILD-----DGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVK 559
+G+G FG V D G VAVK L+ + R+F E+++L LH +VK
Sbjct: 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 560 LFGVCIEDNNR--CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHE 617
GV + LV E + +G L L LD + + +G+ YL
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR---ARLDASRLLLYSSQICKGMEYL-- 143
Query: 618 DSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTF--GYLAPEY 675
S R +HRD + NIL+E + K++DFGLA+ L + G + APE
Sbjct: 144 -GSRRCVHRDLAARNILVESEAHVKIADFGLAK-LLPLDKDYYVVREPGQSPIFWYAPES 201
Query: 676 AMTGHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTI 732
+SDV+S+GVVL EL T K S ++ R + L+ +
Sbjct: 202 LSDNIFSRQSDVWSFGVVLYELFTYCDKSC--SPSAEFLRMMGCERDVPALSRLLELL 257
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 157 bits (398), Expect = 1e-42
Identities = 63/218 (28%), Positives = 105/218 (48%), Gaps = 27/218 (12%)
Query: 505 RIIGEGGFGVVYRGILDDGRE------VAVKVLKR-ANQHGGREFLAELEMLSRLHHRNL 557
R +G+G FG+VY G+ + VA+K + A+ EFL E ++ + ++
Sbjct: 31 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 90
Query: 558 VKLFGVCIEDNNRCLVYELIHNGSLESHL------HGDDKVNGPLDWDARMKIALGAARG 611
V+L GV + ++ EL+ G L+S+L ++ V P +++A A G
Sbjct: 91 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 150
Query: 612 LAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYL 671
+AYL ++ + +HRD + N ++ DFT K+ DFG+ R + + G G L
Sbjct: 151 MAYL---NANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET-----DYYRKGGKGLL 202
Query: 672 -----APEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
+PE G SDV+S+GVVL E+ T +P
Sbjct: 203 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 240
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 155 bits (395), Expect = 1e-42
Identities = 66/203 (32%), Positives = 104/203 (51%), Gaps = 15/203 (7%)
Query: 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVC 564
+G G FG V+ G + +VAVK LK+ + FLAE ++ +L H+ LV+L+ V
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 565 IEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVI 624
++ ++ E + NGSL L L + + +A A G+A++ I
Sbjct: 78 TQEPI-YIITEYMENGSLVDFLKTPSG--IKLTINKLLDMAAQIAEGMAFI---EERNYI 131
Query: 625 HRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGT---FGYLAPEYAMTGHL 681
HRD +++NIL+ + K++DFGLAR D T G + APE G
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDN----EYTAREGAKFPIKWTAPEAINYGTF 187
Query: 682 LVKSDVYSYGVVLLELLT-GRKP 703
+KSDV+S+G++L E++T GR P
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIP 210
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 160 bits (407), Expect = 2e-42
Identities = 68/203 (33%), Positives = 99/203 (48%), Gaps = 19/203 (9%)
Query: 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVC 564
+ IG+G FG V G G +VAVK +K + FLAE ++++L H NLV+L GV
Sbjct: 199 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 565 IEDNNR-CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRV 623
+E+ +V E + GSL +L + L D +K +L + YL
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYL---EGNNF 310
Query: 624 IHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGY--LAPEYAMTGHL 681
+HRD + N+L+ D KVSDFGL + + ST G APE
Sbjct: 311 VHRDLAARNVLVSEDNVAKVSDFGLTK---EA----SSTQDTGKLPVKWTAPEALREKKF 363
Query: 682 LVKSDVYSYGVVLLELLT-GRKP 703
KSDV+S+G++L E+ + GR P
Sbjct: 364 STKSDVWSFGILLWEIYSFGRVP 386
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 155 bits (393), Expect = 3e-42
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 19/206 (9%)
Query: 505 RIIGEGGFGVVYRGIL-DDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGV 563
+G G +G VY G+ VAVK LK EFL E ++ + H NLV+L GV
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 564 CIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRV 623
C + ++ E + G+L +L ++ + + +A + + YL
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYL---EKKNF 132
Query: 624 IHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYL-----APEYAMT 678
IHRD + N L+ + KV+DFGL+R + T+ APE
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGD------TYTAHAGAKFPIKWTAPESLAY 186
Query: 679 GHLLVKSDVYSYGVVLLELLT-GRKP 703
+KSDV+++GV+L E+ T G P
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSP 212
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 155 bits (393), Expect = 4e-42
Identities = 67/206 (32%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 505 RIIGEGGFGVVYRG---ILDDGREVAVKVLKRANQHGGREFLA----ELEMLSRLHHRNL 557
+G GG VY IL+ +VA+K + E L E+ S+L H+N+
Sbjct: 17 DKLGGGGMSTVYLAEDTILN--IKVAIKAI-FIPPREKEETLKRFEREVHNSSQLSHQNI 73
Query: 558 VKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHE 617
V + V ED+ LV E I +L ++ +GPL D + G+ + H+
Sbjct: 74 VSMIDVDEEDDCYYLVMEYIEGPTLSEYIES----HGPLSVDTAINFTNQILDGIKHAHD 129
Query: 618 DSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAM 677
R++HRD K NIL++ + T K+ DFG+A+ AL E + + HV+GT Y +PE A
Sbjct: 130 M---RIVHRDIKPQNILIDSNKTLKIFDFGIAK-ALSETSLTQTNHVLGTVQYFSPEQAK 185
Query: 678 TGHLLVKSDVYSYGVVLLELLTGRKP 703
+D+YS G+VL E+L G P
Sbjct: 186 GEATDECTDIYSIGIVLYEMLVGEPP 211
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 155 bits (393), Expect = 4e-42
Identities = 67/211 (31%), Positives = 98/211 (46%), Gaps = 15/211 (7%)
Query: 502 HTSRIIGEGGFGVVYRGILDDGRE----VAVKVLKR-ANQHGGREFLAELEMLSRLHHRN 556
H+ R+IG+G FGVVY G D + A+K L R FL E ++ L+H N
Sbjct: 24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPN 83
Query: 557 LVKLFGVCIEDNNRCL-VYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYL 615
++ L G+ + + + +G L + + + L ARG+ YL
Sbjct: 84 VLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQR---NPTVKDLISFGLQVARGMEYL 140
Query: 616 HEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTF--GYLAP 673
+ + +HRD + N +L+ FT KV+DFGLAR LD + H + A
Sbjct: 141 ---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTAL 197
Query: 674 EYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
E T KSDV+S+GV+L ELLT G P
Sbjct: 198 ESLQTYRFTTKSDVWSFGVLLWELLTRGAPP 228
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 6e-42
Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 30/217 (13%)
Query: 505 RIIGEGGFGVVYRGIL--------DDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRN 556
+G+G F +++G+ EV +KVL +A+++ F M+S+L H++
Sbjct: 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 557 LVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLH 616
LV +GVC+ + LV E + GSL+++L + ++ ++++A A + +L
Sbjct: 74 LVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNK---NCINILWKLEVAKQLAAAMHFL- 129
Query: 617 EDSSPRVIHRDFKSSNILLEHDFTP--------KVSDFGLARTALDEGNKHISTHVMGTF 668
+IH + + NILL + K+SD G++ T L + +
Sbjct: 130 --EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWV--- 184
Query: 669 GYLAPEYAMTGHLL-VKSDVYSYGVVLLELLT-GRKP 703
PE L + +D +S+G L E+ + G KP
Sbjct: 185 ---PPECIENPKNLNLATDKWSFGTTLWEICSGGDKP 218
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 7e-42
Identities = 64/223 (28%), Positives = 100/223 (44%), Gaps = 32/223 (14%)
Query: 505 RIIGEGGFGVVYRGILDDGRE------VAVKVLKRANQHGGREFLAELEMLSRLHHRNLV 558
R +GEG FG V+ + VAVK LK ++F E E+L+ L H ++V
Sbjct: 21 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIV 80
Query: 559 KLFGVCIEDNNRCLVYELIHNGSLESHL------------HGDDKVNGPLDWDARMKIAL 606
K +GVC + + +V+E + +G L L + G L + IA
Sbjct: 81 KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 140
Query: 607 GAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMG 666
A G+ YL +S +HRD + N L+ + K+ DFG++R + +G
Sbjct: 141 QIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYST-----DYYRVG 192
Query: 667 TFGYL-----APEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
L PE M +SDV+S+GV+L E+ T G++P
Sbjct: 193 GHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 153 bits (389), Expect = 9e-42
Identities = 60/204 (29%), Positives = 100/204 (49%), Gaps = 15/204 (7%)
Query: 507 IGEGGFGVVYRGILDDGRE---VAVKVLKR-ANQHGGREFLAELEMLSRLHHRNLVKLFG 562
+G G FG V +G+ ++ VA+KVLK+ + E + E +++ +L + +V+L G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 563 VCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPR 622
VC + LV E+ G L L G + ++ + G+ YL
Sbjct: 78 VC-QAEALMLVMEMAGGGPLHKFLVGKR---EEIPVSNVAELLHQVSMGMKYL---EEKN 130
Query: 623 VIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTF--GYLAPEYAMTGH 680
+HRD + N+LL + K+SDFGL++ AL + + + G + + APE
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSK-ALGADDSYYTARSAGKWPLKWYAPECINFRK 189
Query: 681 LLVKSDVYSYGVVLLELLT-GRKP 703
+SDV+SYGV + E L+ G+KP
Sbjct: 190 FSSRSDVWSYGVTMWEALSYGQKP 213
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 155 bits (393), Expect = 1e-41
Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 22/211 (10%)
Query: 505 RIIGEGGFGVVYRGILDDGRE-----VAVKVLKR-ANQHGGREFLAELEMLSRLHHRNLV 558
++IG G FG VY+G+L VA+K LK + +FL E ++ + H N++
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 559 KLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHED 618
+L GV + ++ E + NG+L+ L D G + + G A G+ YL
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREKD---GEFSVLQLVGMLRGIAAGMKYL--- 163
Query: 619 SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYL-----AP 673
++ +HRD + NIL+ + KVSDFGL+R D+ +T G + AP
Sbjct: 164 ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSG----GKIPIRWTAP 219
Query: 674 EYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
E SDV+S+G+V+ E++T G +P
Sbjct: 220 EAISYRKFTSASDVWSFGIVMWEVMTYGERP 250
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 158 bits (401), Expect = 1e-41
Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 13/202 (6%)
Query: 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVC 564
+ +G G FG V+ + +VAVK +K + FLAE ++ L H LVKL V
Sbjct: 194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV-EAFLAEANVMKTLQHDKLVKLHAVV 252
Query: 565 IEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVI 624
++ ++ E + GSL L D+ + + A G+A++ I
Sbjct: 253 TKEPI-YIITEFMAKGSLLDFLKSDEG--SKQPLPKLIDFSAQIAEGMAFI---EQRNYI 306
Query: 625 HRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGY--LAPEYAMTGHLL 682
HRD +++NIL+ K++DFGLAR D N++ + F APE G
Sbjct: 307 HRDLRAANILVSASLVCKIADFGLARVIED--NEYTAREG-AKFPIKWTAPEAINFGSFT 363
Query: 683 VKSDVYSYGVVLLELLT-GRKP 703
+KSDV+S+G++L+E++T GR P
Sbjct: 364 IKSDVWSFGILLMEIVTYGRIP 385
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 1e-41
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 505 RIIGEGGFGVVYRGILDDGRE----VAVKVLKR--ANQHGGREFLAELEMLSRLHHRNLV 558
+I+GEG FG V G L VAVK +K ++Q EFL+E + H N++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 559 KLFGVCIEDNNRC-----LVYELIHNGSLESHL--HGDDKVNGPLDWDARMKIALGAARG 611
+L GVCIE +++ ++ + G L ++L + + +K + A G
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 612 LAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYL 671
+ YL S+ +HRD + N +L D T V+DFGL++ + G +
Sbjct: 160 MEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSG-----DYYRQGRIAKM 211
Query: 672 -----APEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
A E KSDV+++GV + E+ T G P
Sbjct: 212 PVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTP 249
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 159 bits (403), Expect = 1e-41
Identities = 60/203 (29%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 505 RIIGEGGFGVVYRGIL-DDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGV 563
+G G +G VY G+ VAVK LK EFL E ++ + H NLV+L GV
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 564 CIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRV 623
C + ++ E + G+L +L ++ + + +A + + YL
Sbjct: 285 CTREPPFYIITEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYL---EKKNF 339
Query: 624 IHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGY--LAPEYAMTGHL 681
IHR+ + N L+ + KV+DFGL+R L G+ + + F APE
Sbjct: 340 IHRNLAARNCLVGENHLVKVADFGLSR--LMTGDTYTAHA-GAKFPIKWTAPESLAYNKF 396
Query: 682 LVKSDVYSYGVVLLELLT-GRKP 703
+KSDV+++GV+L E+ T G P
Sbjct: 397 SIKSDVWAFGVLLWEIATYGMSP 419
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 1e-41
Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 505 RIIGEGGFGVVYRGIL--DDGRE--VAVKVLKR-ANQHGGREFLAELEMLSRLHHRNLVK 559
+IIG G G V G L R+ VA+K LK + R+FL+E ++ + H N+++
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 560 LFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDS 619
L GV +V E + NGSL++ L D G + + G G+ YL S
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHD---GQFTIMQLVGMLRGVGAGMRYL---S 168
Query: 620 SPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYL-----APE 674
+HRD + N+L++ + KVSDFGL+R D+ + +T G + APE
Sbjct: 169 DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTG----GKIPIRWTAPE 224
Query: 675 YAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
SDV+S+GVV+ E+L G +P
Sbjct: 225 AIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 152 bits (387), Expect = 2e-41
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 17/207 (8%)
Query: 505 RIIGEGGFGVVYRGILDDGR---EVAVKVLKRA--NQHGGREFLAELEMLSRLHHRNLVK 559
+ +G G FG V +G + VAVK+LK + E LAE ++ +L + +V+
Sbjct: 23 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 82
Query: 560 LFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDS 619
+ G+C ++ LV E+ G L +L + N + +++ + G+ YL
Sbjct: 83 MIGICEAESW-MLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYL---E 134
Query: 620 SPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTF--GYLAPEYAM 677
+HRD + N+LL K+SDFGL++ AL + G + + APE
Sbjct: 135 ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECIN 193
Query: 678 TGHLLVKSDVYSYGVVLLELLT-GRKP 703
KSDV+S+GV++ E + G+KP
Sbjct: 194 YYKFSSKSDVWSFGVLMWEAFSYGQKP 220
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 153 bits (390), Expect = 2e-41
Identities = 66/222 (29%), Positives = 103/222 (46%), Gaps = 31/222 (13%)
Query: 505 RIIGEGGFGVVYRGILDDGRE------VAVKVLKRANQHGGREFLAELEMLSRLHHRNLV 558
+GEG FG V+ + VAVK LK A++ ++F E E+L+ L H+++V
Sbjct: 47 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIV 106
Query: 559 KLFGVCIEDNNRCLVYELIHNGSLESHL-----------HGDDKVNGPLDWDARMKIALG 607
+ FGVC E +V+E + +G L L G+D GPL + +A
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166
Query: 608 AARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGT 667
A G+ YL + +HRD + N L+ K+ DFG++R + +G
Sbjct: 167 VAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST-----DYYRVGG 218
Query: 668 FGYL-----APEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
L PE + +SDV+S+GVVL E+ T G++P
Sbjct: 219 RTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 154 bits (392), Expect = 3e-41
Identities = 71/274 (25%), Positives = 117/274 (42%), Gaps = 17/274 (6%)
Query: 441 PEQTPHDVICAPAKLSGATTTLRYGSMLSSSSVSIDSCAVTYTGTAKTFTLND--IEKAT 498
D IC+ +LS + L + ++ + I ++
Sbjct: 29 RGSPGLDGICSIEELSTSLYKKAGSENLYFQGANTVHIDLSALNPELVQAVQHVVIGPSS 88
Query: 499 NGFHTSRIIGEGGFGVVYRGILDDGRE----VAVKVLKR-ANQHGGREFLAELEMLSRLH 553
H + +IG G FG VY G L D AVK L R + +FL E ++
Sbjct: 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 148
Query: 554 HRNLVKLFGVCIE-DNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGL 612
H N++ L G+C+ + + +V + +G L + + + + L A+G+
Sbjct: 149 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQVAKGM 205
Query: 613 AYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTF--GY 670
+L +S + +HRD + N +L+ FT KV+DFGLAR D+ + +
Sbjct: 206 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 262
Query: 671 LAPEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
+A E T KSDV+S+GV+L EL+T G P
Sbjct: 263 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 296
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 152 bits (385), Expect = 3e-41
Identities = 63/205 (30%), Positives = 97/205 (47%), Gaps = 14/205 (6%)
Query: 505 RIIGEGGFGVVYRGILDDGRE----VAVKVLKR-ANQHGGREFLAELEMLSRLHHRNLVK 559
R IGEG FG V++GI VA+K K + +FL E + + H ++VK
Sbjct: 21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 80
Query: 560 LFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDS 619
L GV E+ ++ EL G L S L LD + + A + LAYL
Sbjct: 81 LIGVITENPV-WIIMELCTLGELRSFLQVRK---YSLDLASLILYAYQLSTALAYL---E 133
Query: 620 SPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTG 679
S R +HRD + N+L+ + K+ DFGL+R +++ + ++ ++APE
Sbjct: 134 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFR 192
Query: 680 HLLVKSDVYSYGVVLLELLT-GRKP 703
SDV+ +GV + E+L G KP
Sbjct: 193 RFTSASDVWMFGVCMWEILMHGVKP 217
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 151 bits (385), Expect = 3e-41
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 24/210 (11%)
Query: 505 RIIGEGGFGVVYRGILDDGRE----VAVKVLKR-ANQHGGREFLAELEMLSRLHHRNLVK 559
RI+GEG FG VY G+ + + VAVK K+ +F++E ++ L H ++VK
Sbjct: 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 77
Query: 560 LFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDS 619
L G+ E+ ++ EL G L +L + L + +L + +AYL
Sbjct: 78 LIGIIEEEP-TWIIMELYPYGELGHYLERNK---NSLKVLTLVLYSLQICKAMAYL---E 130
Query: 620 SPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYL-----APE 674
S +HRD NIL+ K+ DFGL+R DE + + L +PE
Sbjct: 131 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE------DYYKASVTRLPIKWMSPE 184
Query: 675 YAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
SDV+ + V + E+L+ G++P
Sbjct: 185 SINFRRFTTASDVWMFAVCMWEILSFGKQP 214
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 152 bits (386), Expect = 3e-41
Identities = 64/208 (30%), Positives = 99/208 (47%), Gaps = 15/208 (7%)
Query: 505 RIIGEGGFGVVYRGILDDGRE----VAVKVLKR-ANQHGGREFLAELEMLSRLHHRNLVK 559
+IG G FG VY G L D AVK L R + +FL E ++ H N++
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 560 LFGVCIE-DNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHED 618
L G+C+ + + +V + +G L + + + + L A+G+ YL
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQVAKGMKYL--- 144
Query: 619 SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTF--GYLAPEYA 676
+S + +HRD + N +L+ FT KV+DFGLAR D+ + ++A E
Sbjct: 145 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 204
Query: 677 MTGHLLVKSDVYSYGVVLLELLT-GRKP 703
T KSDV+S+GV+L EL+T G P
Sbjct: 205 QTQKFTTKSDVWSFGVLLWELMTRGAPP 232
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 156 bits (397), Expect = 3e-41
Identities = 67/200 (33%), Positives = 100/200 (50%), Gaps = 9/200 (4%)
Query: 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVC 564
+G+G FG V+ G + VA+K LK FL E +++ +L H LV+L+ V
Sbjct: 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 565 IEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVI 624
E+ +V E + GSL L G+ L + +A A G+AY+ +
Sbjct: 249 SEEPI-YIVTEYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYV---ERMNYV 302
Query: 625 HRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVK 684
HRD +++NIL+ + KV+DFGLAR D + APE A+ G +K
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-RQGAKFPIKWTAPEAALYGRFTIK 361
Query: 685 SDVYSYGVVLLELLT-GRKP 703
SDV+S+G++L EL T GR P
Sbjct: 362 SDVWSFGILLTELTTKGRVP 381
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 152 bits (386), Expect = 3e-41
Identities = 68/209 (32%), Positives = 94/209 (44%), Gaps = 18/209 (8%)
Query: 505 RIIGEGGFGVVYRGIL----DDGREVAVKVLKR---ANQHGGREFLAELEMLSRLHHRNL 557
+G+G FGVV RG VAVK LK + +F+ E+ + L HRNL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 558 VKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHE 617
++L+GV + +V EL GSL L G + A+ A G+ YL
Sbjct: 84 IRLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQ---GHFLLGTLSRYAVQVAEGMGYL-- 137
Query: 618 DSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGY--LAPEY 675
S R IHRD + N+LL K+ DFGL R AL + + H + APE
Sbjct: 138 -ESKRFIHRDLAARNLLLATRDLVKIGDFGLMR-ALPQNDDHYVMQEHRKVPFAWCAPES 195
Query: 676 AMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
T SD + +GV L E+ T G++P
Sbjct: 196 LKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 4e-41
Identities = 67/207 (32%), Positives = 100/207 (48%), Gaps = 15/207 (7%)
Query: 505 RIIGEGGFGVVYRGIL--DDGRE--VAVKVLKR-ANQHGGREFLAELEMLSRLHHRNLVK 559
+++G G FG V G L +E VA+K LK + R+FL E ++ + H N+++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 560 LFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDS 619
L GV + +V E + NGSL+S L D + + G A G+ YL S
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGMKYL---S 164
Query: 620 SPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYL--APEYAM 677
+HRD + NIL+ + KVSDFGL R D+ +T G +PE
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTR-GGKIPIRWTSPEAIA 223
Query: 678 TGHLLVKSDVYSYGVVLLELLT-GRKP 703
SDV+SYG+VL E+++ G +P
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERP 250
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 152 bits (386), Expect = 7e-41
Identities = 53/206 (25%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 505 RIIGEGGFGVVYRGILDDGRE-----VAVKVLKR-ANQHGGREFLAELEMLSRLHHRNLV 558
+++G G FG V++G+ E V +KV++ + + + + + L H ++V
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 559 KLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHED 618
+L G+C + LV + + GSL H+ G L + + A+G+ YL
Sbjct: 79 RLLGLCPGSS-LQLVTQYLPLGSLLDHVRQHR---GALGPQLLLNWGVQIAKGMYYL--- 131
Query: 619 SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMT 678
++HR+ + N+LL+ +V+DFG+A + + + + ++A E
Sbjct: 132 EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHF 191
Query: 679 GHLLVKSDVYSYGVVLLELLT-GRKP 703
G +SDV+SYGV + EL+T G +P
Sbjct: 192 GKYTHQSDVWSYGVTVWELMTFGAEP 217
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 151 bits (383), Expect = 8e-41
Identities = 66/224 (29%), Positives = 95/224 (42%), Gaps = 33/224 (14%)
Query: 505 RIIGEGGFGVVYRGILDDGRE------VAVKVLKR-ANQHGGREFLAELEMLSRLHHRNL 557
+GE FG VY+G L VA+K LK A EF E + +RL H N+
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 558 VKLFGVCIEDNNRCLVYELIHNGSLESHL------------HGDDKVNGPLDWDARMKIA 605
V L GV +D +++ +G L L D V L+ + +
Sbjct: 75 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134
Query: 606 LGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVM 665
A G+ YL SS V+H+D + N+L+ K+SD GL R + +
Sbjct: 135 AQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAA-----DYYKL 186
Query: 666 GTFGYL-----APEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
L APE M G + SD++SYGVVL E+ + G +P
Sbjct: 187 LGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 230
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 159 bits (403), Expect = 1e-40
Identities = 71/270 (26%), Positives = 115/270 (42%), Gaps = 14/270 (5%)
Query: 440 QPEQTPHDVICAPAKLSGATTTLRYGSMLSSSSVSIDSCAVTYTGTAKTFTLNDIEKATN 499
+P++ + + KL+ +S S + + T + D E
Sbjct: 331 RPQKEGERALPSIPKLANNEKQGVRSHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRE 390
Query: 500 GFHTSRIIGEGGFGVVYRGILDDGRE----VAVKVLKR-ANQHGGREFLAELEMLSRLHH 554
R IGEG FG V++GI VA+K K + +FL E + + H
Sbjct: 391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 450
Query: 555 RNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAY 614
++VKL GV E+ ++ EL G L S L LD + + A + LAY
Sbjct: 451 PHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRK---FSLDLASLILYAYQLSTALAY 506
Query: 615 LHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPE 674
L S R +HRD + N+L+ + K+ DFGL+R +++ + ++ ++APE
Sbjct: 507 L---ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPE 562
Query: 675 YAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
SDV+ +GV + E+L G KP
Sbjct: 563 SINFRRFTSASDVWMFGVCMWEILMHGVKP 592
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 151 bits (384), Expect = 1e-40
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 28/219 (12%)
Query: 505 RIIGEGGFGVVYRGILDDGRE----VAVKVLKR--ANQHGGREFLAELEMLSRLHHRNLV 558
R++G+G FG V L VAVK+LK EFL E + H ++
Sbjct: 29 RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVA 88
Query: 559 KLFGVCIEDNNR------CLVYELIHNGSLESHL--HGDDKVNGPLDWDARMKIALGAAR 610
KL GV + + ++ + +G L + L + L ++ + A
Sbjct: 89 KLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIAC 148
Query: 611 GLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGY 670
G+ YL SS IHRD + N +L D T V+DFGL+R + G
Sbjct: 149 GMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSG-----DYYRQGCASK 200
Query: 671 L-----APEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
L A E V SDV+++GV + E++T G+ P
Sbjct: 201 LPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 159 bits (403), Expect = 1e-40
Identities = 54/238 (22%), Positives = 88/238 (36%), Gaps = 42/238 (17%)
Query: 505 RIIGEGGFGVVYRGILD---DGREVAVKVLKRANQHGGRE-FLAELEMLSRLHHRNLVKL 560
I GG G +Y LD +GR V +K L + + +AE + L+ + H ++V++
Sbjct: 86 GCIAHGGLGWIYLA-LDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQI 144
Query: 561 FGVCIEDNNRC------LVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAY 614
F +E +R +V E + SL+ L + L L+Y
Sbjct: 145 FNF-VEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ------KLPVAEAIAYLLEILPALSY 197
Query: 615 LHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPE 674
LH +++ D K NI+L + K+ D G G ++ GT G+ APE
Sbjct: 198 LHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSFG------YLYGTPGFQAPE 247
Query: 675 YAMTGHLLVKSDVYSYGVVLLELLTGRKPVD-------------LSQPPGQENLVAWA 719
V +D+Y+ G L L + L L+ A
Sbjct: 248 IV-RTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDPVLKTYDSYGRLLRRA 304
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 151 bits (383), Expect = 1e-40
Identities = 68/210 (32%), Positives = 97/210 (46%), Gaps = 20/210 (9%)
Query: 505 RIIGEGGFGVVYRGILDD-----GREVAVKVLKR-ANQHGGREFLAELEMLSRLHHRNLV 558
R +GEG FG V D G VAVK LK A + E+++L L+H +++
Sbjct: 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHII 96
Query: 559 KLFGVCIEDNNR--CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLH 616
K G C + LV E + GSL +L + + A G+AYLH
Sbjct: 97 KYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS-----IGLAQLLLFAQQICEGMAYLH 151
Query: 617 EDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTF--GYLAPE 674
+ IHRD + N+LL++D K+ DFGLA+ A+ EG+++ G + APE
Sbjct: 152 ---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAK-AVPEGHEYYRVREDGDSPVFWYAPE 207
Query: 675 YAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
SDV+S+GV L ELLT
Sbjct: 208 CLKEYKFYYASDVWSFGVTLYELLTHCDSS 237
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 150 bits (382), Expect = 2e-40
Identities = 54/206 (26%), Positives = 102/206 (49%), Gaps = 14/206 (6%)
Query: 505 RIIGEGGFGVVYRGILDDGRE-----VAVKVLKR-ANQHGGREFLAELEMLSRLHHRNLV 558
+++G G FG VY+G+ E VA+K L+ + +E L E +++ + + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 559 KLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHED 618
+L G+C+ L+ +L+ G L ++ + + + A+G+ YL
Sbjct: 81 RLLGICLTST-VQLITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQIAKGMNYL--- 133
Query: 619 SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMT 678
R++HRD + N+L++ K++DFGLA+ E ++ + ++A E +
Sbjct: 134 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 679 GHLLVKSDVYSYGVVLLELLT-GRKP 703
+SDV+SYGV + EL+T G KP
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTFGSKP 219
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 150 bits (380), Expect = 3e-40
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 24/212 (11%)
Query: 505 RIIGEGGFGVVYRG---ILDDGREVAVKVLKRANQHGGREFLA----ELEMLSRLHHRNL 557
I+G GG V+ R+VAVKVL RA+ F E + + L+H +
Sbjct: 18 EILGFGGMSEVHLARDLRDH--RDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAI 74
Query: 558 VKLFGVCIEDNNRC----LVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLA 613
V ++ + +V E + +L +H GP+ +++ A + L
Sbjct: 75 VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALN 130
Query: 614 YLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHI--STHVMGTFGYL 671
+ H++ +IHRD K +NI++ KV DFG+AR A+ + + + V+GT YL
Sbjct: 131 FSHQN---GIIHRDVKPANIMISATNAVKVMDFGIAR-AIADSGNSVTQTAAVIGTAQYL 186
Query: 672 APEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
+PE A + +SDVYS G VL E+LTG P
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 149 bits (378), Expect = 3e-40
Identities = 65/268 (24%), Positives = 103/268 (38%), Gaps = 33/268 (12%)
Query: 506 IIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGG--REFLAELEMLSRLHHRNLVKLFG 562
IG G F VY+G+ + EVA L+ + F E EML L H N+V+ +
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYD 92
Query: 563 VCI----EDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHED 618
LV EL+ +G+L+++L K + +GL +LH
Sbjct: 93 SWESTVKGKKCIVLVTELMTSGTLKTYL----KRFKVMKIKVLRSWCRQILKGLQFLHT- 147
Query: 619 SSPRVIHRDFKSSNILLEH-DFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAM 677
+P +IHRD K NI + + K+ D GLA + V+GT ++APE
Sbjct: 148 RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK----RASFAKAVIGTPEFMAPEMYE 203
Query: 678 TGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVI 737
+ DVY++G+ +LE+ T P Q Q + +
Sbjct: 204 EKYDE-SVDVYAFGMCMLEMATSEYPYSECQNAAQ-----------IYRRVTSGVKPASF 251
Query: 738 ESNISYDTLVKVAAIASMCVQPEVSHRP 765
+ + V I C++ R
Sbjct: 252 DKVAIPE----VKEIIEGCIRQNKDERY 275
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 148 bits (375), Expect = 1e-39
Identities = 57/206 (27%), Positives = 81/206 (39%), Gaps = 18/206 (8%)
Query: 505 RIIGEGGFGVVYRG---ILDDGREVAVKVLKRANQHGGREFLA----ELEMLSRLHHRNL 557
R++G GG G VY + + R VA+K++ F E RL ++
Sbjct: 40 RLVGRGGMGDVYEAEDTVRE--RIVALKLM-SETLSSDPVFRTRMQREARTAGRLQEPHV 96
Query: 558 VKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHE 617
V + D + LI+ L + L GPL + I L H
Sbjct: 97 VPIHDFGEIDGQLYVDMRLINGVDLAAMLRR----QGPLAPPRAVAIVRQIGSALDAAHA 152
Query: 618 DSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAM 677
HRD K NIL+ D + DFG+A DE + +GT Y+APE
Sbjct: 153 A---GATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGN-TVGTLYYMAPERFS 208
Query: 678 TGHLLVKSDVYSYGVVLLELLTGRKP 703
H ++D+Y+ VL E LTG P
Sbjct: 209 ESHATYRADIYALTCVLYECLTGSPP 234
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 148 bits (376), Expect = 1e-39
Identities = 67/222 (30%), Positives = 98/222 (44%), Gaps = 34/222 (15%)
Query: 505 RIIGEGGFGVVYRGILDDGRE---VAVKVLKR-ANQHGGREFLAELEMLSRL-HHRNLVK 559
+IGEG FG V + + A+K +K A++ R+F ELE+L +L HH N++
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 560 LFGVCIEDNNRCLVYELIHNGSLESHL------------HGDDKVNGPLDWDARMKIALG 607
L G C L E +G+L L + L + A
Sbjct: 91 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150
Query: 608 AARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGT 667
ARG+ YL S + IHRD + NIL+ ++ K++DFGL+R +V T
Sbjct: 151 VARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRG--------QEVYVKKT 199
Query: 668 FGYL-----APEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
G L A E SDV+SYGV+L E+++ G P
Sbjct: 200 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 241
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 147 bits (372), Expect = 5e-39
Identities = 64/218 (29%), Positives = 95/218 (43%), Gaps = 27/218 (12%)
Query: 505 RIIGEGGFGVVYRGILDDGR------EVAVKVLK-RANQHGGREFLAELEMLSRLHHRNL 557
R +G G FG VY G + +VAVK L ++ +FL E ++S+ +H+N+
Sbjct: 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 95
Query: 558 VKLFGVCIEDNNRCLVYELIHNGSLESHLH---GDDKVNGPLDWDARMKIALGAARGLAY 614
V+ GV ++ R ++ EL+ G L+S L L + +A A G Y
Sbjct: 96 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 615 LHEDSSPRVIHRDFKSSNILLE---HDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYL 671
L IHRD + N LL K+ DFG+AR S + G L
Sbjct: 156 L---EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-----SYYRKGGCAML 207
Query: 672 -----APEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
PE M G K+D +S+GV+L E+ + G P
Sbjct: 208 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 245
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 151 bits (384), Expect = 5e-39
Identities = 66/200 (33%), Positives = 102/200 (51%), Gaps = 9/200 (4%)
Query: 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVC 564
+G+G FG V+ G + VA+K LK FL E +++ +L H LV+L+ V
Sbjct: 273 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVV 331
Query: 565 IEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVI 624
E+ +V E + GSL L G+ L + +A A G+AY+ +
Sbjct: 332 SEEPI-YIVTEYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYV---ERMNYV 385
Query: 625 HRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVK 684
HRD +++NIL+ + KV+DFGLAR +++ + APE A+ G +K
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 444
Query: 685 SDVYSYGVVLLELLT-GRKP 703
SDV+S+G++L EL T GR P
Sbjct: 445 SDVWSFGILLTELTTKGRVP 464
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 145 bits (369), Expect = 1e-38
Identities = 62/223 (27%), Positives = 98/223 (43%), Gaps = 32/223 (14%)
Query: 505 RIIGEGGFGVVYRGILDDGRE------VAVKVLK-RANQHGGREFLAELEMLSRL-HHRN 556
+ +G G FG V + VAVK+LK A+ ++EL+++S L H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 557 LVKLFGVCIEDNNRCLVYELIHNGSLESHL----------HGDDKVNGPLDWDARMKIAL 606
+V L G C ++ E G L + L N + +
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSS 171
Query: 607 GAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMG 666
A+G+A+L +S IHRD + N+LL + K+ DFGLAR +++ N +++
Sbjct: 172 QVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN-----YIVK 223
Query: 667 TFGYL-----APEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
L APE V+SDV+SYG++L E+ + G P
Sbjct: 224 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 266
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 145 bits (367), Expect = 1e-38
Identities = 55/221 (24%), Positives = 86/221 (38%), Gaps = 24/221 (10%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVK 559
+ + +GEGGF V L DG A+K + Q E E +M +H N+++
Sbjct: 31 YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILR 90
Query: 560 LFGVCIEDNNR----CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYL 615
L C+ + L+ G+L + + L D + + LG RGL +
Sbjct: 91 LVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAI 150
Query: 616 HEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVM-------GTF 668
H + HRD K +NILL + P + D G A + T
Sbjct: 151 H---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTI 207
Query: 669 GYLAPE------YAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
Y APE + + ++DV+S G VL ++ G P
Sbjct: 208 SYRAPELFSVQSHCVIDE---RTDVWSLGCVLYAMMFGEGP 245
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 145 bits (367), Expect = 2e-38
Identities = 64/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 505 RIIGEGGFGVVYRGILDDGRE------VAVKVLK-RANQHGGREFLAELEMLSRLHHRNL 557
+ +GEG FG V + + VAVK+LK A+ R+ L+E +L +++H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 558 VKLFGVCIEDNNRCLVYELIHNGSLESHL--------------------HGDDKVNGPLD 597
+KL+G C +D L+ E GSL L D L
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 598 WDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN 657
+ A ++G+ YL + +++HRD + NIL+ K+SDFGL+R +E +
Sbjct: 149 MGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 658 KHISTHVMGTFGYL-----APEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
+V + G + A E +SDV+S+GV+L E++T G P
Sbjct: 206 -----YVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 144 bits (366), Expect = 3e-38
Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 36/227 (15%)
Query: 505 RIIGEGGFGVVYRGIL--------DDGREVAVKVLKR-ANQHGGREFLAELEMLSRL-HH 554
+ +GEG FG V + VAVK+LK A + + ++E+EM+ + H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 555 RNLVKLFGVCIEDNNRCLVYELIHNGSLESHL------------HGDDKVNGPLDWDARM 602
+N++ L G C +D ++ E G+L +L + + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 603 KIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIST 662
ARG+ YL +S + IHRD + N+L+ + K++DFGLAR +
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY----- 212
Query: 663 HVMGTFGYL-----APEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
+ T G L APE +SDV+S+GV++ E+ T G P
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 142 bits (361), Expect = 5e-38
Identities = 67/297 (22%), Positives = 112/297 (37%), Gaps = 67/297 (22%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVK 559
F +IG GGFG V++ DG+ +K +K N+ + E++ L++L H N+V
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE----KAEREVKALAKLDHVNIVH 68
Query: 560 LFGVCIEDNNR----------------CLVYELIHNGSLESHLHGDDKVNGPLDWDARMK 603
G + + E G+LE + + LD ++
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIE--KRRGEKLDKVLALE 126
Query: 604 IALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTH 663
+ +G+ Y+H S ++I+RD K SNI L K+ DFGL +L K T
Sbjct: 127 LFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVT-SLKNDGKR--TR 180
Query: 664 VMGTFGYLAPE------YAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVA 717
GT Y++PE Y G + D+Y+ G++L ELL
Sbjct: 181 SKGTLRYMSPEQISSQDY---GK---EVDLYALGLILAELLHVCDT-----AFETSKF-- 227
Query: 718 WARPLLTTKEGLKTIIDPVIESNISYD--TLVKVAAIASMCVQPEVSHRPFMGEVVQ 772
+ D +I TL++ + + RP E+++
Sbjct: 228 -----------FTDLRDGIISDIFDKKEKTLLQ------KLLSKKPEDRPNTSEILR 267
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 145 bits (367), Expect = 5e-38
Identities = 63/218 (28%), Positives = 94/218 (43%), Gaps = 27/218 (12%)
Query: 505 RIIGEGGFGVVYRGILDDGR------EVAVKVLK-RANQHGGREFLAELEMLSRLHHRNL 557
R +G G FG VY G + +VAVK L ++ +FL E ++S+ +H+N+
Sbjct: 77 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 136
Query: 558 VKLFGVCIEDNNRCLVYELIHNGSLESHLH---GDDKVNGPLDWDARMKIALGAARGLAY 614
V+ GV ++ R ++ EL+ G L+S L L + +A A G Y
Sbjct: 137 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 196
Query: 615 LHEDSSPRVIHRDFKSSNILLE---HDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYL 671
L IHRD + N LL K+ DFG+AR + G L
Sbjct: 197 L---EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-----GYYRKGGCAML 248
Query: 672 -----APEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
PE M G K+D +S+GV+L E+ + G P
Sbjct: 249 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 286
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 149 bits (378), Expect = 7e-38
Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 15/204 (7%)
Query: 507 IGEGGFGVVYRGILDDGRE---VAVKVLKRANQHGGR-EFLAELEMLSRLHHRNLVKLFG 562
+G G FG V +G+ ++ VA+KVLK+ + E + E +++ +L + +V+L G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 563 VCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPR 622
VC + LV E+ G L L G + ++ + G+ YL
Sbjct: 404 VCQAEAL-MLVMEMAGGGPLHKFLVGKR---EEIPVSNVAELLHQVSMGMKYL---EEKN 456
Query: 623 VIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGY--LAPEYAMTGH 680
+HR+ + N+LL + K+SDFGL++ AL + + + G + APE
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSK-ALGADDSYYTARSAGKWPLKWYAPECINFRK 515
Query: 681 LLVKSDVYSYGVVLLELLT-GRKP 703
+SDV+SYGV + E L+ G+KP
Sbjct: 516 FSSRSDVWSYGVTMWEALSYGQKP 539
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 143 bits (364), Expect = 9e-38
Identities = 64/232 (27%), Positives = 95/232 (40%), Gaps = 41/232 (17%)
Query: 505 RIIGEGGFGVVYRGILDDGRE------VAVKVLKR-ANQHGGREFLAELEMLSRLHHRNL 557
R IGEG FG V++ VAVK+LK A+ +F E +++ + N+
Sbjct: 53 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNI 112
Query: 558 VKLFGVCIEDNNRCLVYELIHNGSLESHL--HGDDKVNGPLDWDAR-------------- 601
VKL GVC CL++E + G L L V D
Sbjct: 113 VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 172
Query: 602 ----MKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN 657
+ IA A G+AYL S + +HRD + N L+ + K++DFGL+R
Sbjct: 173 CAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA-- 227
Query: 658 KHISTHVMGTFGYL-----APEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
+ + PE +SDV++YGVVL E+ + G +P
Sbjct: 228 ---DYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP 276
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 143 bits (362), Expect = 9e-38
Identities = 64/226 (28%), Positives = 100/226 (44%), Gaps = 35/226 (15%)
Query: 505 RIIGEGGFGVVYRGIL------DDGREVAVKVLKR-ANQHGGREFLAELEMLSRL-HHRN 556
+ +G G FG V R VAVK+LK A R ++EL++L + HH N
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 557 LVKLFGVCIEDNN-RCLVYELIHNGSLESHL------------HGDDKVNGPLDWDARMK 603
+V L G C + ++ E G+L ++L +D L + +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 604 IALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTH 663
+ A+G+ +L +S + IHRD + NILL K+ DFGLAR + + +
Sbjct: 153 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-----Y 204
Query: 664 VMGTFGYL-----APEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
V L APE ++SDV+S+GV+L E+ + G P
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 144 bits (365), Expect = 1e-37
Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 36/227 (15%)
Query: 505 RIIGEGGFGVVYRGIL--------DDGREVAVKVLKR-ANQHGGREFLAELEMLSRL-HH 554
+ +GEG FG V + VAVK+LK A + + ++E+EM+ + H
Sbjct: 87 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 146
Query: 555 RNLVKLFGVCIEDNNRCLVYELIHNGSLESHL------------HGDDKVNGPLDWDARM 602
+N++ L G C +D ++ E G+L +L + + + +
Sbjct: 147 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 206
Query: 603 KIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIST 662
ARG+ YL +S + IHRD + N+L+ + K++DFGLAR +
Sbjct: 207 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY----- 258
Query: 663 HVMGTFGYL-----APEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
+ T G L APE +SDV+S+GV++ E+ T G P
Sbjct: 259 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 305
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 143 bits (362), Expect = 2e-37
Identities = 51/218 (23%), Positives = 89/218 (40%), Gaps = 24/218 (11%)
Query: 501 FHTSRIIGEGGFGVVYRGILDDGREVAVKV--LKRANQHGGREFLAELEMLSRL--HHRN 556
+ + IG GG V++ + + + A+K L+ A+ + E+ L++L H
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 70
Query: 557 LVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLH 616
+++L+ I D +V E N L S L K +D R + +H
Sbjct: 71 IIRLYDYEITDQYIYMVMEC-GNIDLNSWL----KKKKSIDPWERKSYWKNMLEAVHTIH 125
Query: 617 EDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPE-- 674
+ ++H D K +N L+ D K+ DFG+A + + +GT Y+ PE
Sbjct: 126 QH---GIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 181
Query: 675 ----YAMTGHLLV-----KSDVYSYGVVLLELLTGRKP 703
+ KSDV+S G +L + G+ P
Sbjct: 182 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 219
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 142 bits (359), Expect = 2e-37
Identities = 50/218 (22%), Positives = 88/218 (40%), Gaps = 24/218 (11%)
Query: 501 FHTSRIIGEGGFGVVYRGILDDGREVAVKV--LKRANQHGGREFLAELEMLSRLHHRNL- 557
+ + IG GG V++ + + + A+K L+ A+ + E+ L++L +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 89
Query: 558 -VKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLH 616
++L+ I D +V E N L S L K +D R + +H
Sbjct: 90 IIRLYDYEITDQYIYMVMEC-GNIDLNSWL----KKKKSIDPWERKSYWKNMLEAVHTIH 144
Query: 617 EDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPE-- 674
+ ++H D K +N L+ D K+ DFG+A + + +GT Y+ PE
Sbjct: 145 QH---GIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 200
Query: 675 ----YAMTGHLLV-----KSDVYSYGVVLLELLTGRKP 703
+ KSDV+S G +L + G+ P
Sbjct: 201 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 3e-37
Identities = 68/271 (25%), Positives = 113/271 (41%), Gaps = 35/271 (12%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGRE---FLAELEMLSRLHHRNLVKL 560
+ IG G F VYR L DG VA+K ++ + + + E+++L +L+H N++K
Sbjct: 38 KKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKY 97
Query: 561 FGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSS 620
+ IEDN +V EL G L + K + K + L ++H
Sbjct: 98 YASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR-- 155
Query: 621 PRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPE------ 674
RV+HRD K +N+ + K+ D GL R + V GT Y++PE
Sbjct: 156 -RVMHRDIKPANVFITATGVVKLGDLGLGR-FFSSKTTAAHSLV-GTPYYMSPERIHENG 212
Query: 675 YAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIID 734
Y KSD++S G +L E+ + P +L K+ +
Sbjct: 213 YNF------KSDIWSLGCLLYEMAALQSPFY-GDKMNLYSLC---------KKIEQCDYP 256
Query: 735 PVIESNISYDTLVKVAAIASMCVQPEVSHRP 765
P+ + S + + + +MC+ P+ RP
Sbjct: 257 PLPSDHYSEE----LRQLVNMCINPDPEKRP 283
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 3e-37
Identities = 67/227 (29%), Positives = 97/227 (42%), Gaps = 36/227 (15%)
Query: 505 RIIGEGGFGVVYRGIL------DDGREVAVKVLKR-ANQHGGREFLAELEMLSRL-HHRN 556
+ +G G FG V D VAVK+LK A+ ++EL++LS L +H N
Sbjct: 29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 88
Query: 557 LVKLFGVCIEDNNRCLVYELIHNGSLESHL--HGDDKVNGPLDWDAR------------M 602
+V L G C ++ E G L + L D + +
Sbjct: 89 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 148
Query: 603 KIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIST 662
+ A+G+A+L +S IHRD + NILL H K+ DFGLAR ++ N
Sbjct: 149 SFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN----- 200
Query: 663 HVMGTFGYL-----APEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
+V+ L APE +SDV+SYG+ L EL + G P
Sbjct: 201 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 247
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 142 bits (361), Expect = 4e-37
Identities = 65/227 (28%), Positives = 101/227 (44%), Gaps = 36/227 (15%)
Query: 505 RIIGEGGFGVVYRGIL--------DDGREVAVKVLKR-ANQHGGREFLAELEMLSRL-HH 554
+ +GEG FG V + +VAVK+LK A + + ++E+EM+ + H
Sbjct: 75 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 134
Query: 555 RNLVKLFGVCIEDNNRCLVYELIHNGSLESHL------------HGDDKVNGPLDWDARM 602
+N++ L G C +D ++ E G+L +L + L +
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 603 KIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIST 662
A ARG+ YL +S + IHRD + N+L+ D K++DFGLAR
Sbjct: 195 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY----- 246
Query: 663 HVMGTFGYL-----APEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
+ T G L APE +SDV+S+GV+L E+ T G P
Sbjct: 247 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 293
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 140 bits (354), Expect = 5e-37
Identities = 67/316 (21%), Positives = 112/316 (35%), Gaps = 48/316 (15%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGRE-FLAELEMLSRLHHRNLV 558
F + +G GGFGVV+ D A+K ++ N+ RE + E++ L++L H +V
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 559 KLFGVCIEDNNR------------CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIAL 606
+ F +E N + +L +L + + I L
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENL-KDWMNGRCTIEERERSVCLHIFL 125
Query: 607 GAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR----------TALDEG 656
A + +LH S ++HRD K SNI D KV DFGL
Sbjct: 126 QIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMP 182
Query: 657 NKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLV 716
T +GT Y++PE K D++S G++L ELL P +
Sbjct: 183 AYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---------PFSTQME- 232
Query: 717 AWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKL 776
R T ++ + P + + + + P RP +++ +
Sbjct: 233 ---RVRTLTD--VRNLKFPPLFTQKYPC----EYVMVQDMLSPSPMERPEAINIIE-NAV 282
Query: 777 VCNEFDETKETIESRD 792
+ K + R
Sbjct: 283 FEDLDFPGKTVLRQRS 298
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 140 bits (356), Expect = 1e-36
Identities = 62/232 (26%), Positives = 104/232 (44%), Gaps = 41/232 (17%)
Query: 505 RIIGEGGFGVVYRGILDDGRE------VAVKVLKR-ANQHGGREFLAELEMLSRL-HHRN 556
+++G G FG V + VAVK+LK A+ ++EL+M+++L H N
Sbjct: 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 557 LVKLFGVCIEDNNRCLVYELIHNGSLESHL--HGDDKVNGPLDWDAR------------- 601
+V L G C L++E G L ++L + ++++ +
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 170
Query: 602 ----MKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN 657
+ A A+G+ +L +HRD + N+L+ H K+ DFGLAR + + N
Sbjct: 171 FEDLLCFAYQVAKGMEFL---EFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN 227
Query: 658 KHISTHVMGTFGYL-----APEYAMTGHLLVKSDVYSYGVVLLELLT-GRKP 703
+V+ L APE G +KSDV+SYG++L E+ + G P
Sbjct: 228 -----YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP 274
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 138 bits (350), Expect = 2e-36
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 17/213 (7%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGV 563
++G+G +G+VY G L + +A+K + + + E+ + L H+N+V+ G
Sbjct: 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 87
Query: 564 CIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDAR--MKIALGAARGLAYLHEDSSP 621
E+ + E + GSL + L GPL + + GL YLH++
Sbjct: 88 FSENGFIKIFMEQVPGGSLSALLR---SKWGPLKDNEQTIGFYTKQILEGLKYLHDN--- 141
Query: 622 RVIHRDFKSSNILL-EHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPE---YAM 677
+++HRD K N+L+ + K+SDFG ++ + GT Y+APE
Sbjct: 142 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET--FTGTLQYMAPEIIDKGP 199
Query: 678 TGHLLVKSDVYSYGVVLLELLTGRKP-VDLSQP 709
G+ +D++S G ++E+ TG+ P +L +P
Sbjct: 200 RGYGK-AADIWSLGCTIIEMATGKPPFYELGEP 231
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 138 bits (350), Expect = 5e-36
Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 22/214 (10%)
Query: 499 NGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKV--LKRANQHGGREFLAELEMLSRLHHR 555
+ + IGEG FG +DGR+ +K + R + E E+ +L+ + H
Sbjct: 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHP 83
Query: 556 NLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYL 615
N+V+ E+ + +V + G L ++ + D + + L ++
Sbjct: 84 NIVQYRESFEENGSLYIVMDYCEGGDLFKRIN--AQKGVLFQEDQILDWFVQICLALKHV 141
Query: 616 HEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPE- 674
H +++HRD KS NI L D T ++ DFG+AR L+ + + GT YL+PE
Sbjct: 142 H---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARV-LNSTVELARACI-GTPYYLSPEI 196
Query: 675 -----YAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
Y KSD+++ G VL EL T +
Sbjct: 197 CENKPYNN------KSDIWALGCVLYELCTLKHA 224
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 135 bits (342), Expect = 1e-35
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 21/212 (9%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKV--LKRANQHGGREFLAELEMLSRLHHRNLVKLF 561
IG G +G + DG+ + K + + ++E+ +L L H N+V+ +
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 562 GVCIEDNNR--CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHE-- 617
I+ N +V E G L S + K LD + +++ L H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 618 DSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPE--- 674
D V+HRD K +N+ L+ K+ DFGLAR L+ T V GT Y++PE
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR-ILNHDTSFAKTFV-GTPYYMSPEQMN 189
Query: 675 ---YAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
Y KSD++S G +L EL P
Sbjct: 190 RMSYNE------KSDIWSLGCLLYELCALMPP 215
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 135 bits (342), Expect = 2e-35
Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 36/228 (15%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVK 559
F ++G+G FG V + D R A+K ++ + L+E+ +L+ L+H+ +V+
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL-STILSEVMLLASLNHQYVVR 66
Query: 560 LFGVCIEDNNR-------------CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIAL 606
+ +E N + E NG+L +H N D ++
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIH---SENLNQQRDEYWRLFR 123
Query: 607 GAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR-------------TAL 653
L+Y+H S +IHRD K NI ++ K+ DFGLA+ L
Sbjct: 124 QILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 654 DEGNKHISTHVMGTFGYLAPE-YAMTGHLLVKSDVYSYGVVLLELLTG 700
+ ++++ + GT Y+A E TGH K D+YS G++ E++
Sbjct: 181 PGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP 227
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 137 bits (347), Expect = 3e-35
Identities = 51/279 (18%), Positives = 99/279 (35%), Gaps = 29/279 (10%)
Query: 440 QPEQTPHDVICAPAKLSGATTTLRYGSMLSSSSVSIDSCAVTYTGTAKTFTLNDIEKATN 499
++ + + + S + D + + ++
Sbjct: 2 HHHHHSSGLVPRGSGMKETAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGRI---- 57
Query: 500 GFHTSRIIGEGGFGVVYRGILDDGREVAVKV--LKRANQHGGREFLAELEMLSRLHHRNL 557
+ + IG GG V++ + + + A+K L+ A+ + E+ L++L +
Sbjct: 58 -YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 558 --VKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYL 615
++L+ I D +V E N L S L K +D R + +
Sbjct: 117 KIIRLYDYEITDQYIYMVMEC-GNIDLNSWL----KKKKSIDPWERKSYWKNMLEAVHTI 171
Query: 616 HEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPE- 674
H+ ++H D K +N L+ D K+ DFG+A + + +G Y+ PE
Sbjct: 172 HQH---GIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEA 227
Query: 675 -----YAMTGHLLV-----KSDVYSYGVVLLELLTGRKP 703
+ KSDV+S G +L + G+ P
Sbjct: 228 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 7e-35
Identities = 61/271 (22%), Positives = 98/271 (36%), Gaps = 38/271 (14%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGG--REFLAELEMLSRL-HHRN 556
F +G G +G V++ +DGR AVK + LAE+ ++ H
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPC 118
Query: 557 LVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLH 616
V+L E L EL SL+ H L LA+LH
Sbjct: 119 CVRLEQAWEEGGILYLQTELC-GPSLQQHCE---AWGASLPEAQVWGYLRDTLLALAHLH 174
Query: 617 EDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYA 676
S ++H D K +NI L K+ DFGL L G Y+APE
Sbjct: 175 ---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLV-ELGTAGAG-EVQE-GDPRYMAPELL 228
Query: 677 MTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPV 736
+ +DV+S G+ +LE+ + P G E ++ + + P
Sbjct: 229 QGSYGT-AADVFSLGLTILEVACNMEL-----PHGGEGW----------QQLRQGYLPPE 272
Query: 737 IESNISYD--TLVKVAAIASMCVQPEVSHRP 765
+ +S + +++ M ++P+ R
Sbjct: 273 FTAGLSSELRSVLV------MMLEPDPKLRA 297
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 2e-34
Identities = 68/211 (32%), Positives = 108/211 (51%), Gaps = 20/211 (9%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRAN--QHGGRE-FLAELEMLSRLHHRN 556
F ++G+G F VYR + G EVA+K++ + + G + E+++ +L H +
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 557 LVKLFGVCIEDNNRC-LVYELIHNGSLESHLHGDDKVNGPLD-WDARMKIALGAARGLAY 614
+++L+ ED+N LV E+ HNG + +L P +AR + G+ Y
Sbjct: 73 ILELYNY-FEDSNYVYLVLEMCHNGEMNRYLK---NRVKPFSENEARHFMH-QIITGMLY 127
Query: 615 LHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVM-GTFGYLAP 673
LH S ++HRD SN+LL + K++DFGLA KH + + GT Y++P
Sbjct: 128 LH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKH---YTLCGTPNYISP 181
Query: 674 EYAM-TGHLLVKSDVYSYGVVLLELLTGRKP 703
E A + H L +SDV+S G + LL GR P
Sbjct: 182 EIATRSAHGL-ESDVWSLGCMFYTLLIGRPP 211
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 2e-34
Identities = 65/213 (30%), Positives = 94/213 (44%), Gaps = 21/213 (9%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRA--NQHGGRE-FLAELEMLSRLHHRN 556
+ R +G+GGF + D A K++ ++ + RE E+ + L H++
Sbjct: 17 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQH 76
Query: 557 LVKLFGVCIEDNNR-CLVYELIHNGSLESHLHGDDKVNGPLD-WDARMKIALGAARGLAY 614
+V G EDN+ +V EL SL K L +AR G Y
Sbjct: 77 VVGFHGF-FEDNDFVFVVLELCRRRSLLELH----KRRKALTEPEAR-YYLRQIVLGCQY 130
Query: 615 LHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVM-GTFGYLAP 673
LH RVIHRD K N+ L D K+ DFGLA +G + V+ GT Y+AP
Sbjct: 131 LH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK---KVLCGTPNYIAP 184
Query: 674 EYAM-TGHLLVKSDVYSYGVVLLELLTGRKPVD 705
E GH + DV+S G ++ LL G+ P +
Sbjct: 185 EVLSKKGHSF-EVDVWSIGCIMYTLLVGKPPFE 216
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 4e-34
Identities = 66/223 (29%), Positives = 95/223 (42%), Gaps = 26/223 (11%)
Query: 487 KTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRAN--QHGGRE-F 542
+ + L D F R +G+G FG VY +A+KVL +A + G
Sbjct: 4 RQWALED-------FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 56
Query: 543 LAELEMLSRLHHRNLVKLFGVCIEDNNRC-LVYELIHNGSLESHLHGDDKVNGPLDWDAR 601
E+E+ S L H N+++L+G D R L+ E G++ L + D
Sbjct: 57 RREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRT 111
Query: 602 MKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIS 661
A L+Y H S RVIHRD K N+LL K++DFG + ++
Sbjct: 112 ATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTD 166
Query: 662 THVMGTFGYLAPEYAMT-GHLLVKSDVYSYGVVLLELLTGRKP 703
GT YL PE H K D++S GV+ E L G+ P
Sbjct: 167 L--CGTLDYLPPEMIEGRMHDE-KVDLWSLGVLCYEFLVGKPP 206
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 4e-34
Identities = 59/205 (28%), Positives = 85/205 (41%), Gaps = 23/205 (11%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKV--LKRANQHGGREFLAELEMLSRLHHRNLVKLFGV 563
+G G FG V+R G + AVK L+ EL + L +V L+G
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE-------ELVACAGLSSPRIVPLYGA 118
Query: 564 CIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRV 623
E + EL+ GSL + K G L D + A GL YLH R+
Sbjct: 119 VREGPWVNIFMELLEGGSLGQLI----KQMGCLPEDRALYYLGQALEGLEYLHTR---RI 171
Query: 624 IHRDFKSSNILLEHDFTP-KVSDFGLARTALDEGNKHISTH---VMGTFGYLAPEYAM-T 678
+H D K+ N+LL D + + DFG A +G + GT ++APE M
Sbjct: 172 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 231
Query: 679 GHLLVKSDVYSYGVVLLELLTGRKP 703
K D++S ++L +L G P
Sbjct: 232 PCDA-KVDIWSSCCMMLHMLNGCHP 255
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 9e-34
Identities = 59/233 (25%), Positives = 100/233 (42%), Gaps = 26/233 (11%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLA-ELEMLSRLHHRNLV 558
+ S I+G+G V+RG G A+KV + + E E+L +L+H+N+V
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 559 KLFGVCIED---NNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYL 615
KLF + E+ ++ L+ E GSL + L G + + + G+ +L
Sbjct: 71 KLFAI-EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFL-IVLRDVVGGMNHL 128
Query: 616 HEDSSPRVIHRDFKSSNILL----EHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYL 671
E+ ++HR+ K NI+ + K++DFG AR L++ + +S + GT YL
Sbjct: 129 REN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE-LEDDEQFVSLY--GTEEYL 182
Query: 672 APEYAMTGHLLV--------KSDVYSYGVVLLELLTGRKP-VDLSQPPGQENL 715
P+ L D++S GV TG P P + +
Sbjct: 183 HPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEV 235
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 132 bits (333), Expect = 1e-33
Identities = 65/211 (30%), Positives = 93/211 (44%), Gaps = 21/211 (9%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRA--NQHGGRE-FLAELEMLSRLHHRN 556
+ R +G+GGF + D A K++ ++ + RE E+ + L H++
Sbjct: 43 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQH 102
Query: 557 LVKLFGVCIEDNNR-CLVYELIHNGSLESHLHGDDKVNGPLD-WDARMKIALGAARGLAY 614
+V G EDN+ +V EL SL K L +AR G Y
Sbjct: 103 VVGFHGF-FEDNDFVFVVLELCRRRSLLELH----KRRKALTEPEAR-YYLRQIVLGCQY 156
Query: 615 LHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVM-GTFGYLAP 673
LH RVIHRD K N+ L D K+ DFGLA +G + V+ GT Y+AP
Sbjct: 157 LH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK---KVLCGTPNYIAP 210
Query: 674 EYAM-TGHLLVKSDVYSYGVVLLELLTGRKP 703
E GH + DV+S G ++ LL G+ P
Sbjct: 211 EVLSKKGHSF-EVDVWSIGCIMYTLLVGKPP 240
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 131 bits (330), Expect = 3e-33
Identities = 52/288 (18%), Positives = 93/288 (32%), Gaps = 36/288 (12%)
Query: 440 QPEQTPHDVICAPAKLSGATTTLRYGSMLSSSSVSIDSCAVTYTGTAKTFTL---NDIEK 496
P+ ++ P L +LS S + S T+ K + + +
Sbjct: 9 GTVDAPNFIVGNPWD-----DKLI-FKLLSGLSKPVSSYPNTFEWQCKLPAIKPKTEFQL 62
Query: 497 ATNGFHTSRIIGEGGFGVVYRGILDD------GREVAVKVLKRANQHGGREFLAELEMLS 550
+ + ++GEG F VY D ++ +KV K AN EF +++
Sbjct: 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANP---WEFYIGTQLME 119
Query: 551 RL---HHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNG-PLDWDARMKIAL 606
RL +K + + N LV EL G+L + ++ + + A+
Sbjct: 120 RLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAM 179
Query: 607 GAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTP-----------KVSDFGLARTALDE 655
+ +H +IH D K N +L + F + D G +
Sbjct: 180 RMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLF 236
Query: 656 GNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
I T T G+ E + D + + +L G
Sbjct: 237 PKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYM 284
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 5e-33
Identities = 53/237 (22%), Positives = 99/237 (41%), Gaps = 27/237 (11%)
Query: 484 GTAKTFTLNDIEKATNG-------FHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQ 536
G++ + +D ++ T+ F ++G G G + + D R+VAVK +
Sbjct: 2 GSSPSLEQDDGDEETSVVIVGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF 61
Query: 537 HGGREFLAELEMLSRL-HHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGP 595
E+++L H N+++ F + + + EL +L+ ++ + K
Sbjct: 62 SFADR---EVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC-AATLQEYV--EQKDFAH 115
Query: 596 LDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEH-----DFTPKVSDFGLAR 650
L + + GLA+LH S ++HRD K NIL+ +SDFGL +
Sbjct: 116 LGLEPI-TLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCK 171
Query: 651 -TALDEGNKHISTHVMGTFGYLAPEY---AMTGHLLVKSDVYSYGVVLLELLTGRKP 703
A+ + + V GT G++APE + D++S G V +++
Sbjct: 172 KLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSH 228
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 134 bits (337), Expect = 1e-32
Identities = 67/223 (30%), Positives = 103/223 (46%), Gaps = 22/223 (9%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLA-ELEMLSRLHHRNLV 558
+ +G GGFG V R I D G +VA+K ++ RE E++++ +L+H N+V
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 559 KLFGVCIEDNNR-------CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIA-LGAAR 610
V + + L E G L +L+ + G + R ++ + +A
Sbjct: 76 SAREV-PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA- 133
Query: 611 GLAYLHEDSSPRVIHRDFKSSNILL---EHDFTPKVSDFGLARTALDEGNKHISTHVMGT 667
L YLHE+ R+IHRD K NI+L K+ D G A+ LD+G + V GT
Sbjct: 134 -LRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE-LDQGEL-CTEFV-GT 186
Query: 668 FGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPP 710
YLAPE V D +S+G + E +TG +P + P
Sbjct: 187 LQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP 229
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 1e-32
Identities = 58/233 (24%), Positives = 96/233 (41%), Gaps = 26/233 (11%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLA-ELEMLSRLHHRNLV 558
+ S I+G+G V+RG G A+KV + + E E+L +L+H+N+V
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 559 KLFGVCIEDNNR---CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYL 615
KLF + E+ L+ E GSL + L G + + + G+ +L
Sbjct: 71 KLFAI-EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFL-IVLRDVVGGMNHL 128
Query: 616 HEDSSPRVIHRDFKSSNILL----EHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYL 671
E+ ++HR+ K NI+ + K++DFG AR L++ + + GT YL
Sbjct: 129 REN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE-LEDDEQ-FVSLY-GTEEYL 182
Query: 672 APEYAMTGHLLV--------KSDVYSYGVVLLELLTGRKP-VDLSQPPGQENL 715
P+ L D++S GV TG P P + +
Sbjct: 183 HPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEV 235
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 2e-32
Identities = 62/293 (21%), Positives = 105/293 (35%), Gaps = 61/293 (20%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKR--ANQHGGREFLAELEMLSRL-HHRN 556
FH IG G FG V++ + DG A+K K+ A + L E+ + L H +
Sbjct: 13 FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSH 72
Query: 557 LVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLH 616
+V+ F ED++ + E + GSL + + ++ + L RGL Y+H
Sbjct: 73 VVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH 132
Query: 617 EDSSPRVIHRDFKSSNILLEHD-------------------FTPKVSDFGLARTALDEGN 657
S ++H D K SNI + K+ D G
Sbjct: 133 ---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVT------- 182
Query: 658 KHISTHVM-GTFGYLAPEYAM--TGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQEN 714
+ S V G +LA E HL K+D+++ + ++ P +
Sbjct: 183 RISSPQVEEGDSRFLANEVLQENYTHLP-KADIFALALTVVCAAGAE------PLPRNGD 235
Query: 715 LVAWARPLLTTKEGLKTIIDPVIESNISYD--TLVKVAAIASMCVQPEVSHRP 765
W ++ P I +S + L+K + + P+ RP
Sbjct: 236 Q--WHE--------IRQGRLPRIPQVLSQEFTELLK------VMIHPDPERRP 272
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 2e-32
Identities = 31/243 (12%), Positives = 57/243 (23%), Gaps = 42/243 (17%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVL---KRANQHGGREFLAELEMLSRLHHRNLVKL 560
+ G VV+ ++ + A+KV ++ +RL + +
Sbjct: 68 EPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEA 127
Query: 561 FGVC--------------------------IEDNNRCLVYELIH--NGSLESHLHGDDKV 592
N L+ L S L
Sbjct: 128 RDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVF 187
Query: 593 NGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTA 652
G A + R A L S ++H F N+ + D + D
Sbjct: 188 RGDEGILALHILTAQLIRLAANLQ---SKGLVHGHFTPDNLFIMPDGRLMLGDVSALWK- 243
Query: 653 LDEGNKHISTHVMGTFGYLAPEYAMTGHLLV--KSDVYSYGVVLLELLTGRKPVDLSQPP 710
G + Y E+ + + G+ + + P L P
Sbjct: 244 --VGTR--GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPG 299
Query: 711 GQE 713
+
Sbjct: 300 IKG 302
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 6e-32
Identities = 53/264 (20%), Positives = 99/264 (37%), Gaps = 41/264 (15%)
Query: 465 GSMLSSSSVSIDSCAVTYTGTAKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDGR 524
GSM S + + K +ND + R + +G F + D +
Sbjct: 4 GSMKDILSNYSNLIYLNKYVKEKDKYIND-------YRIIRTLNQGKFNKIILCE-KDNK 55
Query: 525 EVAVKVLKRANQHGGREFLA-----------------ELEMLSRLHHRNLVKLFGVCIED 567
A+K +++ R+F EL++++ + + + G+ I +
Sbjct: 56 FYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGI-ITN 114
Query: 568 NNR-CLVYELIHNGSLESHL----HGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPR 622
+ ++YE + N S+ D + I +Y+H +
Sbjct: 115 YDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH--NEKN 172
Query: 623 VIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLL 682
+ HRD K SNIL++ + K+SDFG + +D K I GT+ ++ PE +
Sbjct: 173 ICHRDVKPSNILMDKNGRVKLSDFGESEYMVD---KKIKG-SRGTYEFMPPE-FFSNESS 227
Query: 683 V---KSDVYSYGVVLLELLTGRKP 703
K D++S G+ L + P
Sbjct: 228 YNGAKVDIWSLGICLYVMFYNVVP 251
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 8e-32
Identities = 63/226 (27%), Positives = 97/226 (42%), Gaps = 28/226 (12%)
Query: 485 TAKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRAN--QHGGRE 541
+ FT++D F R +G+G FG VY + +A+KVL ++ + G
Sbjct: 7 PKRKFTIDD-------FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEH 59
Query: 542 FLA-ELEMLSRLHHRNLVKLFGVCIEDNNR-CLVYELIHNGSLESHLHGDDKVNGPLD-W 598
L E+E+ S L H N+++++ D R L+ E G L L + +G D
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNY-FHDRKRIYLMLEFAPRGELYKEL----QKHGRFDEQ 114
Query: 599 DARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNK 658
+ + A L Y H +VIHRD K N+L+ + K++DFG + +
Sbjct: 115 RSATFMEE-LADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLR 168
Query: 659 HISTHVM-GTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
M GT YL PE K D++ GV+ E L G P
Sbjct: 169 ---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 125 bits (315), Expect = 1e-30
Identities = 60/231 (25%), Positives = 96/231 (41%), Gaps = 37/231 (16%)
Query: 501 FHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRL-HHRNLVK 559
+ +I+G G G V GR VAVK + L E+++L+ H N+++
Sbjct: 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCD---IALMEIKLLTESDDHPNVIR 73
Query: 560 LFGVCIEDNNRCLVYELIHNGSL----ESHLHGDDKVNGPLDWDARMKIALGAARGLAYL 615
+ D + EL N +L ES D+ + +++ + A G+A+L
Sbjct: 74 YYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPI-SLLRQIASGVAHL 131
Query: 616 HEDSSPRVIHRDFKSSNILL-------------EHDFTPKVSDFGLARTALDEGNKHIST 662
H S ++IHRD K NIL+ + +SDFGL + LD G T
Sbjct: 132 H---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK-LDSGQSSFRT 187
Query: 663 HVM---GTFGYLAPEYAMTGHLLV-------KSDVYSYGVVLLELLTGRKP 703
++ GT G+ APE + L D++S G V +L+ K
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH 238
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 125 bits (315), Expect = 3e-30
Identities = 63/237 (26%), Positives = 94/237 (39%), Gaps = 41/237 (17%)
Query: 485 TAKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGRE-- 541
T F + + + + +G G +G V E A+K++++ +
Sbjct: 23 TPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSK 82
Query: 542 FLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDW--- 598
L E+ +L L H N++KL+ + N LV E G L D
Sbjct: 83 LLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGEL-------------FDEIIH 129
Query: 599 -------DAR--MKIALGAARGLAYLHEDSSPRVIHRDFKSSNILL---EHDFTPKVSDF 646
DA +K L + YLH ++HRD K N+LL E D K+ DF
Sbjct: 130 RMKFNEVDAAVIIKQVLSG---VTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDF 183
Query: 647 GLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
GL+ + K +GT Y+APE + K DV+S GV+L LL G P
Sbjct: 184 GLSAV-FENQKKM--KERLGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAGYPP 236
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 4e-30
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 501 FHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKR-ANQHGGREFLAELEMLSRLHHRNLV 558
F +G G GVV++ G +A K++ + + EL++L + +V
Sbjct: 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 94
Query: 559 KLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHED 618
+G D + E + GSL+ L K G + K+++ +GL YL E
Sbjct: 95 GFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREK 150
Query: 619 SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMT 678
+++HRD K SNIL+ K+ DFG++ +D + V GT Y++PE
Sbjct: 151 H--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---SFV-GTRSYMSPERLQG 204
Query: 679 GHLLVKSDVYSYGVVLLELLTGRKP 703
H V+SD++S G+ L+E+ GR P
Sbjct: 205 THYSVQSDIWSMGLSLVEMAVGRYP 229
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 122 bits (306), Expect = 8e-30
Identities = 29/237 (12%), Positives = 62/237 (26%), Gaps = 42/237 (17%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRA-------------------------NQHG 538
++G+ + G V V NQ
Sbjct: 84 TVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQ 143
Query: 539 GREFLAELEMLSRLHHRNLVKLFGVCIEDN-----NRCLVYELIH--NGSLESHLHGDDK 591
+ L + + K+ V +++ +R +Y + + L
Sbjct: 144 AKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSS 203
Query: 592 VNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLART 651
+ L AR+++ L R LA LH ++H + +I+L+ ++ F
Sbjct: 204 THKSLVHHARLQLTLQVIRLLASLH---HYGLVHTYLRPVDIVLDQRGGVFLTGFEHLV- 259
Query: 652 ALDEGNKHISTHVMGTFGYLAPE-----YAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
A + D ++ G+ + + P
Sbjct: 260 RDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLP 316
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 1e-29
Identities = 64/228 (28%), Positives = 107/228 (46%), Gaps = 22/228 (9%)
Query: 485 TAKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGRE-- 541
T F + ++ + R++G+G FG V G+E AVKV+ + +
Sbjct: 12 TPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE 71
Query: 542 -FLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDA 600
L E+++L +L H N++KL+ + LV E+ G L + + + + DA
Sbjct: 72 SLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFS---EVDA 128
Query: 601 R--MKIALGAARGLAYLHEDSSPRVIHRDFKSSNILL---EHDFTPKVSDFGLARTALDE 655
++ L + Y+H +++HRD K N+LL D ++ DFGL+ E
Sbjct: 129 ARIIRQVLSG---ITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLST--HFE 180
Query: 656 GNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
+K + + GT Y+APE + G K DV+S GV+L LL+G P
Sbjct: 181 ASKKMKDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPP 226
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 5e-29
Identities = 58/221 (26%), Positives = 89/221 (40%), Gaps = 24/221 (10%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRL-HHRNLVKLFG 562
R++ EGGF VY + GRE A+K L + R + E+ + +L H N+V+
Sbjct: 34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCS 93
Query: 563 VCIEDNNR-------CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYL 615
L+ + G L L + GPL D +KI R + ++
Sbjct: 94 AASIGKEESDTGQAEFLLLTELCKGQLVEFLK-KMESRGPLSCDTVLKIFYQTCRAVQHM 152
Query: 616 HEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVM---------- 665
H P +IHRD K N+LL + T K+ DFG A T + S
Sbjct: 153 H-RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRN 211
Query: 666 GTFGYLAPE-YAMTGHLLV--KSDVYSYGVVLLELLTGRKP 703
T Y PE + + + K D+++ G +L L + P
Sbjct: 212 TTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHP 252
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290 | Back alignment and structure |
|---|
Score = 116 bits (294), Expect = 5e-29
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 13/204 (6%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKR-ANQHGGREFLAELEM-LSRLHHRNLVKLFGV 563
+G G +GVV + + G+ +AVK ++ N + L +L++ + + V +G
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 564 CIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRV 623
+ + + EL+ + SL+ + D KIA+ + L +LH V
Sbjct: 75 LFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SV 131
Query: 624 IHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPE----YAMTG 679
IHRD K SN+L+ K+ DFG++ +D+ K G Y+APE
Sbjct: 132 IHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAK---DIDAGCKPYMAPERINPELNQK 188
Query: 680 HLLVKSDVYSYGVVLLELLTGRKP 703
VKSD++S G+ ++EL R P
Sbjct: 189 GYSVKSDIWSLGITMIELAILRFP 212
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 6e-29
Identities = 29/243 (11%), Positives = 70/243 (28%), Gaps = 53/243 (21%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGRE---------------------- 541
++G+ + G V V +
Sbjct: 79 TVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQ 138
Query: 542 ------FLAELEMLSRLHHRNLVKLFGVC--IEDNNRCLVYELIH--NGSLESHLHGDDK 591
F+ +++ + ++++ + +R +Y + + L
Sbjct: 139 AKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSS 198
Query: 592 VNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLART 651
+ L AR+++ L R LA LH ++H + +I+L+ ++ F
Sbjct: 199 THKSLVHHARLQLTLQVIRLLASLH---HYGLVHTYLRPVDIVLDQRGGVFLTGFEHLV- 254
Query: 652 ALDEGNKHISTHVMGTFGYLAPEYAMTGHLLV-----------KSDVYSYGVVLLELLTG 700
+G + + G+ PE + D ++ G+V+ +
Sbjct: 255 --RDGAR---VVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCA 309
Query: 701 RKP 703
P
Sbjct: 310 DLP 312
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 7e-29
Identities = 66/232 (28%), Positives = 93/232 (40%), Gaps = 52/232 (22%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGR-------------EFLAEL 546
+ R +G G +G V + E A+KV+K++ GR E E+
Sbjct: 38 YFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEI 97
Query: 547 EMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDW-------- 598
+L L H N++KLF V + LV E G L +
Sbjct: 98 SLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGEL-------------FEQIINRHKFD 144
Query: 599 --DAR--MKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEH---DFTPKVSDFGLART 651
DA MK L + YLH ++HRD K NILLE+ K+ DFGL+
Sbjct: 145 ECDAANIMKQILSG---ICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSF 198
Query: 652 ALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
+ K +GT Y+APE + K DV+S GV++ LL G P
Sbjct: 199 -FSKDYKL--RDRLGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCGYPP 246
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 8e-29
Identities = 66/246 (26%), Positives = 105/246 (42%), Gaps = 45/246 (18%)
Query: 477 SCAVTYTGTAKTFTLN-DIEKATNGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRA 534
++ + + ++ ++G+G FG V + +E AVKV+ +A
Sbjct: 2 HHHHHHSSGRENLYFQGTFAER---YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKA 58
Query: 535 NQHGG--REFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKV 592
+ L E+E+L +L H N++KLF + + ++ +V EL G L
Sbjct: 59 SAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL---------- 108
Query: 593 NGPLDW----------DAR--MKIALGAARGLAYLHEDSSPRVIHRDFKSSNILL---EH 637
D DA +K + Y+H ++HRD K NILL E
Sbjct: 109 ---FDEIIKRKRFSEHDAARIIKQVFSG---ITYMH---KHNIVHRDLKPENILLESKEK 159
Query: 638 DFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLEL 697
D K+ DFGL+ + N + + GT Y+APE + G K DV+S GV+L L
Sbjct: 160 DCDIKIIDFGLST--CFQQNTKMKDRI-GTAYYIAPE-VLRGTYDEKCDVWSAGVILYIL 215
Query: 698 LTGRKP 703
L+G P
Sbjct: 216 LSGTPP 221
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 3e-28
Identities = 49/210 (23%), Positives = 78/210 (37%), Gaps = 19/210 (9%)
Query: 507 IGEG--GFGVVYRGI-LDDGREVAVKV--LKRANQHGGREFLAELEMLSRLHHRNLVKLF 561
IG+G V G V V+ L+ + EL + +H N+V
Sbjct: 33 IGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYR 92
Query: 562 GVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSP 621
I DN +V + GS + + ++ A I G + L Y+H
Sbjct: 93 ATFIADNELWVVTSFMAYGSAKDLIC--THFMDGMNELAIAYILQGVLKALDYIHHM--- 147
Query: 622 RVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVM-----GTFGYLAPEYA 676
+HR K+S+IL+ D +S + + G + H +L+PE
Sbjct: 148 GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPE-V 206
Query: 677 MTGHLL---VKSDVYSYGVVLLELLTGRKP 703
+ +L KSD+YS G+ EL G P
Sbjct: 207 LQQNLQGYDAKSDIYSVGITACELANGHVP 236
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 4e-28
Identities = 52/209 (24%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVK 559
+ +G+G FG VY+ + G A KV++ ++ +++ E+E+L+ H +VK
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80
Query: 560 LFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDS 619
L G D ++ E G++++ + +++ L + L +LH
Sbjct: 81 LLGAYYHDGKLWIMIEFCPGGAVDAIM---LELDRGLTEPQIQVVCRQMLEALNFLHSK- 136
Query: 620 SPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTG 679
R+IHRD K+ N+L+ + +++DFG++ L K S +GT ++APE M
Sbjct: 137 --RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS--FIGTPYWMAPEVVMCE 192
Query: 680 HLL-----VKSDVYSYGVVLLELLTGRKP 703
+ K+D++S G+ L+E+ P
Sbjct: 193 TMKDTPYDYKADIWSLGITLIEMAQIEPP 221
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 8e-28
Identities = 56/215 (26%), Positives = 86/215 (40%), Gaps = 25/215 (11%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLA----ELEMLSRLHHRNLVK 559
++GEG +G V + + AVK+LK+ A E+++L RL H+N+++
Sbjct: 11 DLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQ 70
Query: 560 LFGVCIEDNNR--CLVYELIHNGSLESHLHGDDKVNGPLD-WDARMK----IALGAARGL 612
L V + + +V E G E + D A I GL
Sbjct: 71 LVDVLYNEEKQKMYMVMEYCVCGMQE--ML-DSVPEKRFPVCQAHGYFCQLID-----GL 122
Query: 613 AYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLA 672
YLH S ++H+D K N+LL T K+S G+A G+ +
Sbjct: 123 EYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQP 179
Query: 673 PEYAMTGHLLV--KSDVYSYGVVLLELLTGRKPVD 705
PE A K D++S GV L + TG P +
Sbjct: 180 PEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 1e-27
Identities = 54/219 (24%), Positives = 85/219 (38%), Gaps = 47/219 (21%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGV 563
++G G F V+ G+ A+K +K++ E+ +L ++ H N+V L +
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 564 CIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDW----------DAR--MKIALGAARG 611
+ LV +L+ G L D DA ++ L A
Sbjct: 75 YESTTHYYLVMQLVSGGEL-------------FDRILERGVYTEKDASLVIQQVLSA--- 118
Query: 612 LAYLHEDSSPRVIHRDFKSSNILLEH---DFTPKVSDFGLARTALDEGNKHISTHVM--- 665
+ YLH ++HRD K N+L + ++DFGL+ K +M
Sbjct: 119 VKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLS--------KMEQNGIMSTA 167
Query: 666 -GTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
GT GY+APE D +S GV+ LL G P
Sbjct: 168 CGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP 206
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 2e-27
Identities = 65/253 (25%), Positives = 111/253 (43%), Gaps = 27/253 (10%)
Query: 466 SMLSSSSVSIDSCAVTYTGTAKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGI-LDDGR 524
S+ SS + I FT D++ IG G +G V + + G+
Sbjct: 2 SIESSGKLKISP------EQHWDFTAEDLKDL-------GEIGRGAYGSVNKMVHKPSGQ 48
Query: 525 EVAVKVLKR-ANQHGGREFLAELEMLSRL-HHRNLVKLFGVCIEDNNRCLVYELIHNGSL 582
+AVK ++ ++ ++ L +L+++ R +V+ +G + + + EL+ + S
Sbjct: 49 IMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELM-STSF 107
Query: 583 ESHLH-GDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTP 641
+ ++ + + KI L + L +L E+ ++IHRD K SNILL+
Sbjct: 108 DKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNI 165
Query: 642 KVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLL----VKSDVYSYGVVLLEL 697
K+ DFG++ +D K T G Y+APE V+SDV+S G+ L EL
Sbjct: 166 KLCDFGISGQLVDSIAK---TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYEL 222
Query: 698 LTGRKPVDLSQPP 710
TGR P
Sbjct: 223 ATGRFPYPKWNSV 235
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 2e-27
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 11/198 (5%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCI 565
IG+G G VY + + G+EVA++ + Q + E+ ++ + N+V +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 566 EDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIH 625
+ +V E + GSL + +D + + L +LH S +VIH
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVT-----ETCMDEGQIAAVCRECLQALEFLH---SNQVIH 139
Query: 626 RDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKS 685
RD KS NILL D + K++DFG E +K + ++GT ++APE K
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGPKV 197
Query: 686 DVYSYGVVLLELLTGRKP 703
D++S G++ +E++ G P
Sbjct: 198 DIWSLGIMAIEMIEGEPP 215
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 3e-27
Identities = 65/211 (30%), Positives = 89/211 (42%), Gaps = 18/211 (8%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGRE-FLAELEMLSRLHHRNLV 558
F R +G G FG V+ G E +K + + E AE+E+L L H N++
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 559 KLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLD-WDAR--MKIALGAARGLAYL 615
K+F V + +N +V E G L + L MK + A LAY
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNA---LAYF 140
Query: 616 HEDSSPRVIHRDFKSSNILL---EHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLA 672
H V+H+D K NIL K+ DFGLA T+ GT Y+A
Sbjct: 141 HSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAEL-FKSDEHS--TNAAGTALYMA 194
Query: 673 PEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
PE + K D++S GVV+ LLTG P
Sbjct: 195 PE-VFKRDVTFKCDIWSAGVVMYFLLTGCLP 224
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 3e-27
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 11/198 (5%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCI 565
IGEG G+V GR+VAVK++ Q E+ ++ H N+V+++ +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 566 EDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIH 625
++ E + G+L + L+ + + + LAYLH + VIH
Sbjct: 113 VGEELWVLMEFLQGGALTDIVS-----QVRLNEEQIATVCEAVLQALAYLH---AQGVIH 164
Query: 626 RDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKS 685
RD KS +ILL D K+SDFG + K S ++GT ++APE +
Sbjct: 165 RDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKS--LVGTPYWMAPEVISRSLYATEV 222
Query: 686 DVYSYGVVLLELLTGRKP 703
D++S G++++E++ G P
Sbjct: 223 DIWSLGIMVIEMVDGEPP 240
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 111 bits (281), Expect = 4e-27
Identities = 58/205 (28%), Positives = 84/205 (40%), Gaps = 25/205 (12%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLA--ELEMLSRLHHRNLVKLFGV 563
IGEG +GVV++ D G+ VA+K + + +A E+ ML +L H NLV L V
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 564 CIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRV 623
LV+E + ++ L D+ + I + + + H
Sbjct: 71 FRRKRRLHLVFEYCDH-TVLHEL---DRYQRGVPEHLVKSITWQTLQAVNFCH---KHNC 123
Query: 624 IHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLV 683
IHRD K NIL+ K+ DFG AR + + + T Y +PE LLV
Sbjct: 124 IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYY--DDEVATRWYRSPE------LLV 175
Query: 684 KSDVYSYGV-------VLLELLTGR 701
Y V V ELL+G
Sbjct: 176 GDTQYGPPVDVWAIGCVFAELLSGV 200
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 5e-27
Identities = 60/199 (30%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGRE-FLAELEMLSRLHHRNLVKLFGVC 564
IG+G FG V++GI + VA+K++ E E+ +LS+ + K +G
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 89
Query: 565 IEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVI 624
++D ++ E + GS L GPLD I +GL YLH + + I
Sbjct: 90 LKDTKLWIIMEYLGGGSALDLLE-----PGPLDETQIATILREILKGLDYLHSE---KKI 141
Query: 625 HRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVK 684
HRD K++N+LL K++DFG+A D K + +GT ++APE K
Sbjct: 142 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQSAYDSK 199
Query: 685 SDVYSYGVVLLELLTGRKP 703
+D++S G+ +EL G P
Sbjct: 200 ADIWSLGITAIELARGEPP 218
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 6e-27
Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 25/207 (12%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLA--ELEMLSRLHHRNLVKLFGV 563
IGEG +G V++ + VA+K ++ + G A E+ +L L H+N+V+L V
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 564 CIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRV 623
D LV+E L+ + D NG LD + +GL + H S V
Sbjct: 70 LHSDKKLTLVFEFCDQ-DLKKYF---DSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNV 122
Query: 624 IHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLV 683
+HRD K N+L+ + K+++FGLAR + + + T Y P+ +L
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY--SAEVVTLWYRPPD------VLF 174
Query: 684 KSDVYSYGV-------VLLELLTGRKP 703
+ +YS + + EL +P
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAGRP 201
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 8e-27
Identities = 51/214 (23%), Positives = 84/214 (39%), Gaps = 28/214 (13%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVK 559
+ +G G FGVV+R + GR K + E+ ++++LHH L+
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLIN 112
Query: 560 LFGVCIEDNNRCLVYELIHNGSL------ESHLHGDDKVNGPLDWDAR--MKIALGAARG 611
L + L+ E + G L E + + + M+ A G
Sbjct: 113 LHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEA--------EVINYMRQACE---G 161
Query: 612 LAYLHEDSSPRVIHRDFKSSNILLEHDFTP--KVSDFGLARTALDEGNKHISTHVMGTFG 669
L ++HE ++H D K NI+ E K+ DFGLA L+ T
Sbjct: 162 LKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATK-LNPDEIV--KVTTATAE 215
Query: 670 YLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
+ APE + +D+++ GV+ LL+G P
Sbjct: 216 FAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSP 249
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 1e-26
Identities = 60/205 (29%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLA--ELEMLSRLHHRNLVKLFGV 563
+GEG +G+V + D GR VA+K ++ + +A E+++L +L H NLV L V
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 564 CIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRV 623
C + LV+E + + ++ L + LD+ K G+ + H S +
Sbjct: 93 CKKKKRWYLVFEFVDH-TILDDL---ELFPNGLDYQVVQKYLFQIINGIGFCH---SHNI 145
Query: 624 IHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLV 683
IHRD K NIL+ K+ DFG ART G + + T Y APE LLV
Sbjct: 146 IHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVY--DDEVATRWYRAPE------LLV 197
Query: 684 KSDVYSYGV-------VLLELLTGR 701
Y V ++ E+ G
Sbjct: 198 GDVKYGKAVDVWAIGCLVTEMFMGE 222
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288 | Back alignment and structure |
|---|
Score = 109 bits (276), Expect = 1e-26
Identities = 62/204 (30%), Positives = 93/204 (45%), Gaps = 24/204 (11%)
Query: 507 IGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLA--ELEMLSRLHHRNLVKLFGVC 564
IGEG +GVVY+ + G A+K ++ + G E+ +L L H N+VKL+ V
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 565 IEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVI 624
LV+E + L+ L D G L+ L G+AY H RV+
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLL---DVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVL 122
Query: 625 HRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVK 684
HRD K N+L+ + K++DFGLAR K+ TH + T Y AP+ +L+
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEIVTLWYRAPD------VLMG 174
Query: 685 SDVYSYGV-------VLLELLTGR 701
S YS + + E++ G
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNGT 198
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311 | Back alignment and structure |
|---|
Score = 109 bits (276), Expect = 2e-26
Identities = 63/204 (30%), Positives = 95/204 (46%), Gaps = 24/204 (11%)
Query: 507 IGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLA--ELEMLSRLHHRNLVKLFGVC 564
+GEG +GVVY+ GR VA+K ++ + G A E+ +L LHH N+V L V
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 565 IEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVI 624
+ LV+E + L+ L D+ L RG+A+ H R++
Sbjct: 89 HSERCLTLVFEFMEK-DLKKVL---DENKTGLQDSQIKIYLYQLLRGVAHCH---QHRIL 141
Query: 625 HRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVK 684
HRD K N+L+ D K++DFGLAR + TH + T Y AP+ +L+
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPD------VLMG 193
Query: 685 SDVYSYGV-------VLLELLTGR 701
S YS V + E++TG+
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGK 217
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 3e-26
Identities = 61/213 (28%), Positives = 92/213 (43%), Gaps = 28/213 (13%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLA-ELEMLSRLHHRNLVKLFG 562
+ +GEG +G V + VAVK++ E + E+ + L+H N+VK +G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 563 VCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMK----IALGAARGLAYLHED 618
E N + L E G L + D + + DA+ +A G+ YLH
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMP---EPDAQRFFHQLMA-----GVVYLH-- 122
Query: 619 SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPE---- 674
+ HRD K N+LL+ K+SDFGLA + + + GT Y+APE
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 675 --YAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 705
+ DV+S G+VL +L G P D
Sbjct: 182 REFH--AE---PVDVWSCGIVLTAMLAGELPWD 209
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 5e-26
Identities = 59/215 (27%), Positives = 87/215 (40%), Gaps = 39/215 (18%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGV 563
IG G +G V + A K + + F E+E++ L H N+++L+
Sbjct: 15 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYET 74
Query: 564 CIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDW----------DAR--MKIALGAARG 611
++ + LV EL G L + DA MK L A
Sbjct: 75 FEDNTDIYLVMELCTGGEL-------------FERVVHKRVFRESDAARIMKDVLSA--- 118
Query: 612 LAYLHEDSSPRVIHRDFKSSNILLEH---DFTPKVSDFGLARTALDEGNKHISTHVMGTF 668
+AY H+ V HRD K N L D K+ DFGLA + K + T V GT
Sbjct: 119 VAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF--KPGKMMRTKV-GTP 172
Query: 669 GYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
Y++P+ + G + D +S GV++ LL G P
Sbjct: 173 YYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCGYPP 206
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 5e-26
Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 11/204 (5%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVK 559
F +GEG +G VY+ I + G+ VA+K + + +E + E+ ++ + ++VK
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL--QEIIKEISIMQQCDSPHVVK 88
Query: 560 LFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDS 619
+G ++ + +V E GS+ + N L D I +GL YLH
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDIIR---LRNKTLTEDEIATILQSTLKGLEYLH--- 142
Query: 620 SPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTG 679
R IHRD K+ NILL + K++DFG+A D K + V+GT ++APE
Sbjct: 143 FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT--VIGTPFWMAPEVIQEI 200
Query: 680 HLLVKSDVYSYGVVLLELLTGRKP 703
+D++S G+ +E+ G+ P
Sbjct: 201 GYNCVADIWSLGITAIEMAEGKPP 224
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 6e-26
Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 51/226 (22%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGRE--FLAELEMLSRLHHRNL 557
++ ++G+G FG V + +E AVKV+ +A+ L E+E+L +L H N+
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 558 VKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDW----------DAR--MKIA 605
+KLF + + ++ +V EL G L D DA +K
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGEL-------------FDEIIKRKRFSEHDAARIIKQV 130
Query: 606 LGAARGLAYLHEDSSPRVIHRDFKSSNILLEH---DFTPKVSDFGLARTALDEGNKHIST 662
+ Y+H+ + ++HRD K NILLE D K+ DFGL+ + N +
Sbjct: 131 FSG---ITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF--QQNTKMKD 182
Query: 663 HVMGTFGYLAPE-----YAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
+ GT Y+APE Y K DV+S GV+L LL+G P
Sbjct: 183 RI-GTAYYIAPEVLRGTYDE------KCDVWSAGVILYILLSGTPP 221
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 109 bits (273), Expect = 6e-26
Identities = 61/263 (23%), Positives = 93/263 (35%), Gaps = 63/263 (23%)
Query: 495 EKATNGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKV-----LKRANQHGGREFLAELEM 548
+ +H IG+G +GVV I A+K+ +++ N E+ +
Sbjct: 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRL 81
Query: 549 LSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSL------ESHLHGDDKVNGPLDWDARM 602
+ +LHH N+ +L+ V ++ CLV EL H G L +
Sbjct: 82 MKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICP 141
Query: 603 KIALG-----------------------AAR-------GLAYLHEDSSPRVIHRDFKSSN 632
+ L YLH + + HRD K N
Sbjct: 142 CPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH---NQGICHRDIKPEN 198
Query: 633 ILLEHD--FTPKVSDFGLAR--TALDEGNKHISTHVMGTFGYLAPE--------YAMTGH 680
L + F K+ DFGL++ L+ G + T GT ++APE Y
Sbjct: 199 FLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGP--- 255
Query: 681 LLVKSDVYSYGVVLLELLTGRKP 703
K D +S GV+L LL G P
Sbjct: 256 ---KCDAWSAGVLLHLLLMGAVP 275
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 7e-26
Identities = 59/230 (25%), Positives = 95/230 (41%), Gaps = 50/230 (21%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGRE--------FLAELEMLSR 551
+ S+ +G G G V ++VA++++ + G E+E+L +
Sbjct: 137 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK 196
Query: 552 LHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDW----------DAR 601
L+H ++K+ + + +V EL+ G L D +
Sbjct: 197 LNHPCIIKIKNF-FDAEDYYIVLELMEGGEL-------------FDKVVGNKRLKEATCK 242
Query: 602 --MKIALGAARGLAYLHEDSSPRVIHRDFKSSNILL---EHDFTPKVSDFGLARTALDEG 656
L A + YLHE+ +IHRD K N+LL E D K++DFG ++ L E
Sbjct: 243 LYFYQMLLA---VQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI-LGET 295
Query: 657 NKHISTHVMGTFGYLAPE---YAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
+ + T + GT YLAPE T D +S GV+L L+G P
Sbjct: 296 SL-MRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 8e-26
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 25/212 (11%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGR------EFLAELEMLSRLHHRNL 557
+G G F +V + G+E A K +K+ R E E+ +L + H N+
Sbjct: 11 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNI 70
Query: 558 VKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDAR--MKIALGAARGLAYL 615
+ L + + L+ EL+ G L L + + +A +K L G+ YL
Sbjct: 71 ITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTED---EATQFLKQILD---GVHYL 124
Query: 616 HEDSSPRVIHRDFKSSNILLEHDFTP----KVSDFGLARTALDEGNKHISTHVMGTFGYL 671
H R+ H D K NI+L P K+ DFG+A ++ GN+ ++ GT ++
Sbjct: 125 HSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK-IEAGNEF--KNIFGTPEFV 178
Query: 672 APEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
APE L +++D++S GV+ LL+G P
Sbjct: 179 APEIVNYEPLGLEADMWSIGVITYILLSGASP 210
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 8e-26
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 17/212 (8%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKR-ANQHGGREFLAELEMLSRLH-HRNLVKLFGV 563
+G G G V++ G +AVK ++R N+ + L +L+++ + H +V+ FG
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 564 CIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRV 623
I + + + EL+ + + ++ GP+ K+ + + L YL E V
Sbjct: 93 FITNTDVFIAMELMGTCAEKL----KKRMQGPIPERILGKMTVAIVKALYYLKEKH--GV 146
Query: 624 IHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLL- 682
IHRD K SNILL+ K+ DFG++ +D+ K G Y+APE
Sbjct: 147 IHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK---DRSAGCAAYMAPERIDPPDPTK 203
Query: 683 ----VKSDVYSYGVVLLELLTGRKPVDLSQPP 710
+++DV+S G+ L+EL TG+ P +
Sbjct: 204 PDYDIRADVWSLGISLVELATGQFPYKNCKTD 235
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 1e-25
Identities = 65/215 (30%), Positives = 99/215 (46%), Gaps = 26/215 (12%)
Query: 506 IIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRL-HHRNLVKLFGV 563
++GEG V I L +E AVK++++ H E+EML + HRN+++L
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 564 CIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDAR--MKIALGAARGLAYLHEDSSP 621
E++ LV+E + GS+ SH+H N + +A ++ A L +LH +
Sbjct: 80 FEEEDRFYLVFEKMRGGSILSHIHKRRHFN---ELEASVVVQDVASA---LDFLH---NK 130
Query: 622 RVIHRDFKSSNILLEH---DFTPKVSDFGLAR-TALDEGNKHISTHVM----GTFGYLAP 673
+ HRD K NIL EH K+ DF L L+ IST + G+ Y+AP
Sbjct: 131 GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAP 190
Query: 674 EYAMTGHLLVKS-----DVYSYGVVLLELLTGRKP 703
E D++S GV+L LL+G P
Sbjct: 191 EVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 1e-25
Identities = 69/239 (28%), Positives = 106/239 (44%), Gaps = 27/239 (11%)
Query: 476 DSCAVTYTGTAKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLK-R 533
DS A+ ++ + L E IG G VV +VA+K +
Sbjct: 4 DSSALPWSINRDDYEL--QEV----------IGSGATAVVQAAYCAPKKEKVAIKRINLE 51
Query: 534 ANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSL----ESHLHGD 589
Q E L E++ +S+ HH N+V + + + LV +L+ GS+ + +
Sbjct: 52 KCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKG 111
Query: 590 DKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFG-- 647
+ +G LD I GL YLH++ IHRD K+ NILL D + +++DFG
Sbjct: 112 EHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVS 168
Query: 648 --LARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLL-VKSDVYSYGVVLLELLTGRKP 703
LA NK T V GT ++APE K+D++S+G+ +EL TG P
Sbjct: 169 AFLATGGDITRNKVRKTFV-GTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 226
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 2e-25
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 25/212 (11%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGR------EFLAELEMLSRLHHRNL 557
+G G F +V + G E A K +K+ R E E+ +L ++ H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 558 VKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDAR--MKIALGAARGLAYL 615
+ L V + L+ EL+ G L L + ++ +A +K L G+ YL
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE---EATSFIKQILD---GVNYL 131
Query: 616 HEDSSPRVIHRDFKSSNILLEHDFTP----KVSDFGLARTALDEGNKHISTHVMGTFGYL 671
H + H D K NI+L P K+ DFGLA +++G + ++ GT ++
Sbjct: 132 HTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE-IEDGVEF--KNIFGTPEFV 185
Query: 672 APEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
APE L +++D++S GV+ LL+G P
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASP 217
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 2e-25
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 28/214 (13%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVK 559
+ I+G G FG V++ G ++A K++K E E+ ++++L H NL++
Sbjct: 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQ 150
Query: 560 LFGVCIEDNNRCLVYELIHNGSL------ESHLHGDDKVNGPLDWDAR--MKIALGAARG 611
L+ N+ LV E + G L ES+ + D MK G
Sbjct: 151 LYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLT--------ELDTILFMKQICE---G 199
Query: 612 LAYLHEDSSPRVIHRDFKSSNILLEHDFTP--KVSDFGLARTALDEGNKHISTHVMGTFG 669
+ ++H ++H D K NIL + K+ DFGLAR K GT
Sbjct: 200 IRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARR-YKPREKL--KVNFGTPE 253
Query: 670 YLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
+LAPE + +D++S GV+ LL+G P
Sbjct: 254 FLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSP 287
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 2e-25
Identities = 61/232 (26%), Positives = 95/232 (40%), Gaps = 51/232 (21%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRA--------NQHGGREFLA-ELEMLS 550
+ I+G G VV R I +E AVK++ RE E+++L
Sbjct: 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 551 RL-HHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDW----------D 599
++ H N+++L + LV++L+ G L D+ +
Sbjct: 79 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL-------------FDYLTEKVTLSEKE 125
Query: 600 AR--MKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN 657
R M+ L + LH+ ++HRD K NILL+ D K++DFG + LD G
Sbjct: 126 TRKIMRALLEV---ICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQ-LDPGE 178
Query: 658 KHISTHVMGTFGYLAPE------YAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
K + GT YLAPE + D++S GV++ LL G P
Sbjct: 179 K-LREVC-GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 2e-25
Identities = 59/235 (25%), Positives = 95/235 (40%), Gaps = 46/235 (19%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVL----------------KRANQHGGREFLAELE 547
IG+G +GVV +D A+KVL R + +
Sbjct: 19 DEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRG 78
Query: 548 MLSR----------LHHRNLVKLFGVCIEDNNR---CLVYELIHNGSLESHLHGDDKV-N 593
+ + L H N+VKL V ++D N +V+EL++ G + +
Sbjct: 79 PIEQVYQEIAILKKLDHPNVVKLVEV-LDDPNEDHLYMVFELVNQGPVM------EVPTL 131
Query: 594 GPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTAL 653
PL D +G+ YLH ++IHRD K SN+L+ D K++DFG++
Sbjct: 132 KPLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNE-F 187
Query: 654 DEGNKHISTHVMGTFGYLAPEYAMTGHLLV---KSDVYSYGVVLLELLTGRKPVD 705
+ +S V GT ++APE + DV++ GV L + G+ P
Sbjct: 188 KGSDALLSNTV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFM 241
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 3e-25
Identities = 61/233 (26%), Positives = 99/233 (42%), Gaps = 37/233 (15%)
Query: 490 TLNDIEKATNGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGR------EF 542
T+ E + + T +G G F VV + G + A K +K+ R +
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 543 LAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSL------ESHLHGDDKVNGPL 596
E+ +L + H N++ L V + L+ EL+ G L + L
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLT--------- 112
Query: 597 DWDAR--MKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTP----KVSDFGLAR 650
+ +A +K L + YLH + H D K NI+L P K+ DFGLA
Sbjct: 113 EEEATEFLKQILNG---VYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 651 TALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
+D GN+ ++ GT ++APE L +++D++S GV+ LL+G P
Sbjct: 167 K-IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 3e-25
Identities = 56/213 (26%), Positives = 88/213 (41%), Gaps = 26/213 (12%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVK 559
+ +G G FGVV+R G A K + ++ E++ +S L H LV
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVN 218
Query: 560 LFGVCIEDNNRCLVYELIHNGSL-------ESHLHGDDKVNGPLDWDARMKIALGAARGL 612
L +DN ++YE + G L + + D+ V M+ GL
Sbjct: 219 LHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE-------YMRQVCK---GL 268
Query: 613 AYLHEDSSPRVIHRDFKSSNILLEHDFTP--KVSDFGLARTALDEGNKHISTHVMGTFGY 670
++HE++ +H D K NI+ + K+ DFGL LD GT +
Sbjct: 269 CHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAH-LDPKQSV--KVTTGTAEF 322
Query: 671 LAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
APE A + +D++S GV+ LL+G P
Sbjct: 323 AAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 355
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 4e-25
Identities = 42/220 (19%), Positives = 84/220 (38%), Gaps = 29/220 (13%)
Query: 495 EKATNGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVL-KRANQHGGREFLAELEMLSRL 552
++ + + +G G FG+V+R + + K + + E+ +L+
Sbjct: 1 KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQ--VLVKKEISILNIA 58
Query: 553 HHRNLVKLFGVCIEDNNRCLVYELIHNGSL-------ESHLHGDDKVNGPLDWDARMKIA 605
HRN++ L +++E I + L+ + V+ +
Sbjct: 59 RHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVS-------YVHQV 111
Query: 606 LGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTP--KVSDFGLARTALDEGNKHISTH 663
L +LH + + H D + NI+ + + K+ +FG AR L G+
Sbjct: 112 CE---ALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQ-LKPGDNF--RL 162
Query: 664 VMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
+ Y APE + +D++S G ++ LL+G P
Sbjct: 163 LFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINP 202
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 4e-25
Identities = 61/213 (28%), Positives = 92/213 (43%), Gaps = 28/213 (13%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLA-ELEMLSRLHHRNLVKLFG 562
+ +GEG +G V + VAVK++ E + E+ + L+H N+VK +G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 563 VCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMK----IALGAARGLAYLHED 618
E N + L E G L + D + + DA+ +A G+ YLH
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMP---EPDAQRFFHQLMA-----GVVYLH-- 122
Query: 619 SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPE---- 674
+ HRD K N+LL+ K+SDFGLA + + + GT Y+APE
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 675 --YAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 705
+ DV+S G+VL +L G P D
Sbjct: 182 REFH--AE---PVDVWSCGIVLTAMLAGELPWD 209
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 4e-25
Identities = 59/231 (25%), Positives = 94/231 (40%), Gaps = 52/231 (22%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGRE--------FLAELEMLSR 551
+ S+ +G G G V ++VA+K++ + G E+E+L +
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 552 LHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDW----------DAR 601
L+H ++K+ + + +V EL+ G L D +
Sbjct: 72 LNHPCIIKIKNF-FDAEDYYIVLELMEGGEL-------------FDKVVGNKRLKEATCK 117
Query: 602 --MKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEH---DFTPKVSDFGLARTALDEG 656
L A + YLHE+ +IHRD K N+LL D K++DFG ++ L E
Sbjct: 118 LYFYQMLLA---VQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI-LGET 170
Query: 657 NKHISTHVMGTFGYLAPE----YAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
+ + T GT YLAPE G+ D +S GV+L L+G P
Sbjct: 171 SL-MRTLC-GTPTYLAPEVLVSVGTAGYNR-AVDCWSLGVILFICLSGYPP 218
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 4e-25
Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 25/222 (11%)
Query: 495 EKATNGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGR------EFLAELE 547
+K + + +G G F +V + G E A K +K+ R E E+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67
Query: 548 MLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDAR--MKIA 605
+L ++ H N++ L V + L+ EL+ G L L + ++ +A +K
Sbjct: 68 ILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE---EATSFIKQI 124
Query: 606 LGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTP----KVSDFGLARTALDEGNKHIS 661
L G+ YLH + H D K NI+L P K+ DFGLA +++G +
Sbjct: 125 LD---GVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE-IEDGVEF-- 175
Query: 662 THVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
++ GT ++APE L +++D++S GV+ LL+G P
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 7e-25
Identities = 56/240 (23%), Positives = 93/240 (38%), Gaps = 54/240 (22%)
Query: 488 TFTLNDIEKATNGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGRE--FLA 544
T T + + +G+G F VV R + + G+E A ++
Sbjct: 3 TITCTRFTEE---YQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLER 59
Query: 545 ELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDW------ 598
E + L H N+V+L E+ + L+++L+ G L +
Sbjct: 60 EARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL-------------FEDIVAREY 106
Query: 599 ----DAR--MKIALGAARGLAYLHEDSSPRVIHRDFKSSNILL---EHDFTPKVSDFGLA 649
DA ++ L A + + H+ V+HR+ K N+LL K++DFGLA
Sbjct: 107 YSEADASHCIQQILEA---VLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLA 160
Query: 650 RTALDEGNKHISTHVMGTFGYLAPE------YAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
++ + GT GYL+PE Y D+++ GV+L LL G P
Sbjct: 161 IE-VEGEQQAWFGFA-GTPGYLSPEVLRKDPYGK------PVDLWACGVILYILLVGYPP 212
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 7e-25
Identities = 56/225 (24%), Positives = 96/225 (42%), Gaps = 55/225 (24%)
Query: 503 TSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRL-HHRNLVKL 560
+ +GEG F + + + + AVK++ + + ++ E+ L H N+VKL
Sbjct: 15 KDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQK---EITALKLCEGHPNIVKL 71
Query: 561 FGVCIEDNNRCLVYELIHNGSL-----------ESHLHGDDKVNGPLDWDAR--MKIALG 607
V + + LV EL++ G L E+ +A M+ +
Sbjct: 72 HEVFHDQLHTFLVMELLNGGELFERIKKKKHFSET--------------EASYIMRKLVS 117
Query: 608 AARGLAYLHEDSSPRVIHRDFKSSNILLEH---DFTPKVSDFGLARTALDEGNKHISTHV 664
A ++++H V+HRD K N+L + K+ DFG AR N+ + T
Sbjct: 118 A---VSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL-KPPDNQPLKTPC 170
Query: 665 MGTFGYLAPEYAMTGHLLVKS------DVYSYGVVLLELLTGRKP 703
T Y APE LL ++ D++S GV+L +L+G+ P
Sbjct: 171 -FTLHYAAPE------LLNQNGYDESCDLWSLGVILYTMLSGQVP 208
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 1e-24
Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 21/216 (9%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRL-HHRNLV 558
F ++G G +G VY+G + G+ A+KV+ E E+ ML + HHRN+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE-EEIKQEINMLKKYSHHRNIA 84
Query: 559 KLFG------VCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGL 612
+G D+ LV E GS+ + L + I RGL
Sbjct: 85 TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK--GNTLKEEWIAYICREILRGL 142
Query: 613 AYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLA 672
++LH +VIHRD K N+LL + K+ DFG++ + + +GT ++A
Sbjct: 143 SHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT--FIGTPYWMA 197
Query: 673 PEYAMTGHLL-----VKSDVYSYGVVLLELLTGRKP 703
PE KSD++S G+ +E+ G P
Sbjct: 198 PEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 2e-24
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 30/213 (14%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRA--NQHGGREFLAELEMLSRLHHRNLVKLF 561
+ IG+G F V + GREVA+K++ + N ++ E+ ++ L+H N+VKLF
Sbjct: 21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80
Query: 562 GVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMK---IALGAARGLAYLHED 618
V + L+ E G + +L ++ +AR K I + Y H
Sbjct: 81 EVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEK---EARSKFRQIV----SAVQYCH-- 131
Query: 619 SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPE---- 674
R++HRD K+ N+LL+ D K++DFG + + G Y APE
Sbjct: 132 -QKRIVHRDLKAENLLLDADMNIKIADFGFS--NEFTVGGKLDAFC-GAPPYAAPELFQG 187
Query: 675 --YAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 705
Y G + DV+S GV+L L++G P D
Sbjct: 188 KKYD--GP---EVDVWSLGVILYTLVSGSLPFD 215
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 2e-24
Identities = 59/227 (25%), Positives = 92/227 (40%), Gaps = 55/227 (24%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRL-HHRNLV 558
+ IG G + V R I E AVK++ ++ + E +E+L R H N++
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEE----IEILLRYGQHPNII 79
Query: 559 KLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDW----------DAR--MKIAL 606
L V + +V EL+ G L LD +A +
Sbjct: 80 TLKDVYDDGKYVYVVTELMKGGEL-------------LDKILRQKFFSEREASAVLFTIT 126
Query: 607 GAARGLAYLHEDSSPRVIHRDFKSSNILL----EHDFTPKVSDFGLARTALDEGNKHIST 662
+ YLH + V+HRD K SNIL + + ++ DFG A+ L N + T
Sbjct: 127 KT---VEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ-LRAENGLLMT 179
Query: 663 HVMGTFGYLAPEYAMTGHLLVKS------DVYSYGVVLLELLTGRKP 703
T ++APE +L + D++S GV+L +LTG P
Sbjct: 180 PC-YTANFVAPE------VLERQGYDAACDIWSLGVLLYTMLTGYTP 219
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 2e-24
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 29/209 (13%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREF----LAELEMLSRLHHRNLVKLF 561
+G G + VY+G+ G VA+K +K ++ G + E+ ++ L H N+V+L+
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEG---TPSTAIREISLMKELKHENIVRLY 69
Query: 562 GVCIEDNNRCLVYELIHNGSLESHL--HGDDKVNGPLDWDARMKIALGAARGLAYLHEDS 619
V +N LV+E + N L+ ++ L+ + +GLA+ HE+
Sbjct: 70 DVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN- 127
Query: 620 SPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTG 679
+++HRD K N+L+ K+ DFGLAR N + + T Y AP+
Sbjct: 128 --KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTF--SSEVVTLWYRAPD----- 178
Query: 680 HLLVKSDVYSYGV-------VLLELLTGR 701
+L+ S YS + +L E++TG+
Sbjct: 179 -VLMGSRTYSTSIDIWSCGCILAEMITGK 206
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 2e-24
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 31/215 (14%)
Query: 501 FHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKL 560
+ ++IG G FGVV++ L + EVA+K + + + R EL+++ + H N+V L
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNR----ELQIMRIVKHPNVVDL 97
Query: 561 FGVCIEDNNRC------LVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAY 614
+ ++ LV E + ++ K+ + R LAY
Sbjct: 98 KAFFYSNGDKKDEVFLNLVLEYV-PETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAY 156
Query: 615 LHEDSSPRVIHRDFKSSNILL-EHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAP 673
+H S + HRD K N+LL K+ DFG A+ L G + + + Y AP
Sbjct: 157 IH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAK-ILIAGEP--NVSYICSRYYRAP 210
Query: 674 EYAMTGHLLVKS-------DVYSYGVVLLELLTGR 701
E L+ + D++S G V+ EL+ G+
Sbjct: 211 E------LIFGATNYTTNIDIWSTGCVMAELMQGQ 239
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 3e-24
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 21/211 (9%)
Query: 503 TSRIIGEGGFGVVYRGI-LDDGREVAVKVLK--RANQHGGREFLAELEMLSRL-HHRNLV 558
TS+ +G G F VV + I G+E A K LK R Q E L E+ +L ++
Sbjct: 33 TSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVI 92
Query: 559 KLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLD-WDAR--MKIALGAARGLAYL 615
L V + L+ E G + S ++ + D +K L G+ YL
Sbjct: 93 NLHEVYENTSEIILILEYAAGGEIFSLC--LPELAEMVSENDVIRLIKQILE---GVYYL 147
Query: 616 HEDSSPRVIHRDFKSSNILLEH---DFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLA 672
H++ ++H D K NILL K+ DFG++R + + +MGT YLA
Sbjct: 148 HQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRK-IGHACEL--REIMGTPEYLA 201
Query: 673 PEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
PE + +D+++ G++ LLT P
Sbjct: 202 PEILNYDPITTATDMWNIGIIAYMLLTHTSP 232
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 4e-24
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 28/208 (13%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGRE---FLA--ELEMLSRLHHRNLVKL 560
+GEG F VY+ + + VA+K +K ++ ++ A E+++L L H N++ L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 561 FGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSS 620
+N LV++ + LE + + L L +GL YLH+
Sbjct: 78 LDAFGHKSNISLVFDFMET-DLEVII---KDNSLVLTPSHIKAYMLMTLQGLEYLHQH-- 131
Query: 621 PRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGH 680
++HRD K +N+LL+ + K++DFGLA++ + TH + T Y APE
Sbjct: 132 -WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAY--THQVVTRWYRAPE------ 182
Query: 681 LLVKSDVYSYGV-------VLLELLTGR 701
LL + +Y GV +L ELL
Sbjct: 183 LLFGARMYGVGVDMWAVGCILAELLLRV 210
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 106 bits (265), Expect = 6e-24
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 30/228 (13%)
Query: 487 KTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRA---NQHGGREF 542
+ + F R++G GGFG V+ + G+ A K L + + G +
Sbjct: 180 QPMGEDW-------FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA 232
Query: 543 LAELEMLSRLHHRNLVKLFGVCIEDNNR-CLVYELIHNGSLESHLHGDDKVNGPLDWDAR 601
+ E ++L+++H R +V L E CLV +++ G + H++ D+ N + R
Sbjct: 233 MVEKKILAKVHSRFIVSLAY-AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQ-EPR 290
Query: 602 MK-----IALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656
I G L +LH+ +I+RD K N+LL+ D ++SD GLA
Sbjct: 291 AIFYTAQIVSG----LEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ 343
Query: 657 NKHISTHVMGTFGYLAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKP 703
K + GT G++APE + G S D ++ GV L E++ R P
Sbjct: 344 TK-TKGYA-GTPGFMAPE-LLLGEEYDFSVDYFALGVTLYEMIAARGP 388
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 2e-23
Identities = 32/202 (15%), Positives = 55/202 (27%), Gaps = 44/202 (21%)
Query: 507 IGEGGFGVVYRGILDD--GREVAVKVLK---RANQHGGREFLAELEMLSRLHHRNLVKLF 561
G ++ LD R+VA+ + +E L+ LSR+ + ++
Sbjct: 39 HGGVPPLQFWQA-LDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVL 97
Query: 562 GVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSP 621
V +V E I GSL+ + + ++ A H
Sbjct: 98 DVVHTRAGGLVVAEWIRGGSLQ------EVADTSPSPVGAIRAMQSLAAAADAAHRAG-- 149
Query: 622 RVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHL 681
V S + + D G V+ +
Sbjct: 150 -VALSIDHPSRVRVSID--------GDV--------------VLAYPATMPDANP----- 181
Query: 682 LVKSDVYSYGVVLLELLTGRKP 703
+ D+ G L LL R P
Sbjct: 182 --QDDIRGIGASLYALLVNRWP 201
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 2e-23
Identities = 57/227 (25%), Positives = 92/227 (40%), Gaps = 52/227 (22%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGRE--FLAELEMLSRLHHRNL 557
+ +G+G F VV R + G E A K++ E + +L H N+
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 67
Query: 558 VKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDW----------DAR--MKIA 605
V+L E++ LV++L+ G L + DA ++
Sbjct: 68 VRLHDSIQEESFHYLVFDLVTGGEL-------------FEDIVAREFYSEADASHCIQQI 114
Query: 606 LGAARGLAYLHEDSSPRVIHRDFKSSNILLEH---DFTPKVSDFGLARTALDEGNKHIST 662
L + +AY H S ++HR+ K N+LL K++DFGLA +++
Sbjct: 115 LES---IAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE-VNDSEA-WHG 166
Query: 663 HVMGTFGYLAPE------YAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
GT GYL+PE Y+ D+++ GV+L LL G P
Sbjct: 167 FA-GTPGYLSPEVLKKDPYSK------PVDIWACGVILYILLVGYPP 206
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 2e-23
Identities = 64/216 (29%), Positives = 94/216 (43%), Gaps = 42/216 (19%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVL-KRANQHGGREFLAELEMLSRLHHRNLVKLFG 562
+G G +VYR + A+KVL K ++ R E+ +L RL H N++KL
Sbjct: 59 SELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRT---EIGVLLRLSHPNIIKLKE 115
Query: 563 VCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDW----------DAR--MKIALGAAR 610
+ LV EL+ G L D DA +K L A
Sbjct: 116 IFETPTEISLVLELVTGGEL-------------FDRIVEKGYYSERDAADAVKQILEA-- 160
Query: 611 GLAYLHEDSSPRVIHRDFKSSNILLEH---DFTPKVSDFGLARTALDEGNKHISTHVMGT 667
+AYLHE+ ++HRD K N+L D K++DFGL++ + E + T GT
Sbjct: 161 -VAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSK--IVEHQVLMKTVC-GT 213
Query: 668 FGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
GY APE + D++S G++ LL G +P
Sbjct: 214 PGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360 | Back alignment and structure |
|---|
Score = 101 bits (255), Expect = 2e-23
Identities = 62/237 (26%), Positives = 94/237 (39%), Gaps = 56/237 (23%)
Query: 495 EKATNGFHTSRIIGEGGFGVVYRGIL-DDGREVAVK-VL---KRANQHGGREFLAELEML 549
K + F R+ G+G FG V G G VA+K V+ + N RE L ++ L
Sbjct: 19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRN----RE-LQIMQDL 73
Query: 550 SRLHHRNLVKLFGVCIEDNNR-------CLVYELIHNGSLESHLHGDDKVNGPLDWDARM 602
+ LHH N+V+L R +V E + LH + R
Sbjct: 74 AVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEY-----VPDTLH---RC---CRNYYRR 122
Query: 603 KIALGAA----------RGLAYLHEDSSPRVIHRDFKSSNILL-EHDFTPKVSDFGLART 651
++A R + LH S V HRD K N+L+ E D T K+ DFG A+
Sbjct: 123 QVAPPPILIKVFLFQLIRSIGCLHLPSV-NVCHRDIKPHNVLVNEADGTLKLCDFGSAK- 180
Query: 652 ALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKS-------DVYSYGVVLLELLTGR 701
L +++ + Y APE L+ + D++S G + E++ G
Sbjct: 181 KLSPSEPNVAYIC--SRYYRAPE------LIFGNQHYTTAVDIWSVGCIFAEMMLGE 229
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 2e-23
Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 30/207 (14%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREF----LAELEMLSRLHHRNLVKLF 561
+GEG + VY+G VA+K ++ ++ G + E+ +L L H N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEG---APCTAIREVSLLKDLKHANIVTLH 66
Query: 562 GVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSP 621
+ + + LV+E + L+ +L D ++ RGLAY H
Sbjct: 67 DIIHTEKSLTLVFEYLDK-DLKQYL---DDCGNIINMHNVKLFLFQLLRGLAYCH---RQ 119
Query: 622 RVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHL 681
+V+HRD K N+L+ K++DFGLAR + + + T Y P+ +
Sbjct: 120 KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY--DNEVVTLWYRPPD------I 171
Query: 682 LVKSDVYSYGV-------VLLELLTGR 701
L+ S YS + + E+ TGR
Sbjct: 172 LLGSTDYSTQIDMWGVGCIFYEMATGR 198
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 2e-23
Identities = 56/221 (25%), Positives = 90/221 (40%), Gaps = 32/221 (14%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKV-----LKRANQHGGREFLAELEMLSRLHH 554
+ +IG+G F VV R I + G++ AVK+ + + E + L H
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 555 RNLVKLFGVCIEDNNRCLVYELIHNGSL----ESHLHGDDKVNGPLDWDAR--MKIALGA 608
++V+L D +V+E + L + + A M+ L A
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYS---EAVASHYMRQILEA 142
Query: 609 ARGLAYLHEDSSPRVIHRDFKSSNILL---EHDFTPKVSDFGLARTALDEGNKHISTHVM 665
L Y H++ +IHRD K +LL E+ K+ FG+A + G + +
Sbjct: 143 ---LRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLV--AGGRV 194
Query: 666 GTFGYLAPE---YAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
GT ++APE G DV+ GV+L LL+G P
Sbjct: 195 GTPHFMAPEVVKREPYGK---PVDVWGCGVILFILLSGCLP 232
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 2e-23
Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 31/210 (14%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLA--ELEMLSRLHHRNLVKLFGV 563
+GEG +G VY+ I VA+K ++ ++ G A E+ +L L HRN+++L V
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 564 CIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRV 623
++ L++E N L+ ++ N + G+ + H S R
Sbjct: 102 IHHNHRLHLIFEYAEN-DLKKYMD----KNPDVSMRVIKSFLYQLINGVNFCH---SRRC 153
Query: 624 IHRDFKSSNILLEHDFTP-----KVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMT 678
+HRD K N+LL K+ DFGLAR + TH + T Y PE
Sbjct: 154 LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQF--THEIITLWYRPPE---- 207
Query: 679 GHLLVKSDVYSYGV-------VLLELLTGR 701
+L+ S YS V + E+L
Sbjct: 208 --ILLGSRHYSTSVDIWSIACIWAEMLMKT 235
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 3e-23
Identities = 64/226 (28%), Positives = 95/226 (42%), Gaps = 41/226 (18%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRA---------NQHGGREFLAELEMLS 550
+ T +G G FG V+ + + +EV VK +K+ + G+ L E+ +LS
Sbjct: 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTL-EIAILS 84
Query: 551 RLHHRNLVKLFGVCIEDNNR-CLVYELIHNGSLESHLHGD--DKV--NGPLDWDARMKIA 605
R+ H N++K+ + E+ LV E +G D + + LD I
Sbjct: 85 RVEHANIIKVLDI-FENQGFFQLVMEKHGSG-------LDLFAFIDRHPRLDEPLASYIF 136
Query: 606 LGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVM 665
+ YL +IHRD K NI++ DFT K+ DFG A A E K T
Sbjct: 137 RQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSA--AYLERGKLFYTFC- 190
Query: 666 GTFGYLAPE------YAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 705
GT Y APE Y G + +++S GV L L+ P
Sbjct: 191 GTIEYCAPEVLMGNPYR--GP---ELEMWSLGVTLYTLVFEENPFC 231
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 4e-23
Identities = 66/300 (22%), Positives = 113/300 (37%), Gaps = 53/300 (17%)
Query: 435 RGAFRQPEQTPHDVICAPAKLSGATTTLRYGSMLSSSSVSIDSCAVTYTGTAKTFTLNDI 494
R + I + + L + + + + + + L D
Sbjct: 27 RHLPNLNREQRRAFIRSLRDDPSQSANLLAEAKKLNDAQPKGTENLYFQSMGPEDELPDW 86
Query: 495 EKATN---GFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLA------ 544
A + +IG G VV R + G E AVK+++ + E L
Sbjct: 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREAT 146
Query: 545 --ELEMLSRLH-HRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDW--- 598
E +L ++ H +++ L + LV++L+ G L D+
Sbjct: 147 RRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGEL-------------FDYLTE 193
Query: 599 -------DAR--MKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLA 649
+ R M+ L A +++LH + ++HRD K NILL+ + ++SDFG +
Sbjct: 194 KVALSEKETRSIMRSLLEA---VSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFS 247
Query: 650 RTALDEGNKHISTHVMGTFGYLAPE------YAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
L+ G K + GT GYLAPE + D+++ GV+L LL G P
Sbjct: 248 CH-LEPGEK-LRELC-GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 99.2 bits (248), Expect = 4e-23
Identities = 63/222 (28%), Positives = 94/222 (42%), Gaps = 47/222 (21%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRA--NQHGGREFLA-ELEMLSRLHHRNLVKL 560
+G G FG V G G +VAVK+L R + E++ L H +++KL
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 561 FGVCIEDNNR-CLVYELIHNGSLESHL--HGDDKVNGPLDWDARMKIALGAAR------- 610
+ V I +V E + G L ++ HG R++ AR
Sbjct: 77 YQV-ISTPTDFFMVMEYVSGGELFDYICKHG------------RVEEM--EARRLFQQIL 121
Query: 611 -GLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFG 669
+ Y H V+HRD K N+LL+ K++DFGL+ + + + T G+
Sbjct: 122 SAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLS--NMMSDGEFLRT-SCGSPN 175
Query: 670 YLAPE------YAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 705
Y APE YA G + D++S GV+L LL G P D
Sbjct: 176 YAAPEVISGRLYA--GP---EVDIWSCGVILYALLCGTLPFD 212
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 99 bits (249), Expect = 6e-23
Identities = 50/269 (18%), Positives = 76/269 (28%), Gaps = 73/269 (27%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVA-------------------VKVLKRAN----- 535
F + +G GGFGVV+ D A VK L +
Sbjct: 8 FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 67
Query: 536 ----------------------------------QHGGREFLAELEMLSRLHHRNLVKLF 561
++ + +N V
Sbjct: 68 RYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQL 127
Query: 562 GVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSP 621
+ +L +L + + I + A + +LH S
Sbjct: 128 QPSSPKVYLYIQMQLCRKENL-KDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLH---SK 183
Query: 622 RVIHRDFKSSNILLEHDFTPKVSDFGLAR----------TALDEGNKHISTHVMGTFGYL 671
++HRD K SNI D KV DFGL T +GT Y+
Sbjct: 184 GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYM 243
Query: 672 APEYAMTGHLLVKSDVYSYGVVLLELLTG 700
+PE + K D++S G++L ELL
Sbjct: 244 SPEQIHGNNYSHKVDIFSLGLILFELLYS 272
|
| >1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310 | Back alignment and structure |
|---|
Score = 99.6 bits (249), Expect = 6e-23
Identities = 61/253 (24%), Positives = 99/253 (39%), Gaps = 38/253 (15%)
Query: 465 GSMLSSSSVSIDSCAVTYTGTAKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGIL-DDG 523
G+ + + D F +I+GEG F V
Sbjct: 3 GTAAEPRPGAGSLQHAQPPPQPRKKRPED-------FKFGKILGEGSFSTVVLARELATS 55
Query: 524 REVAVKVLKRAN-------QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYEL 576
RE A+K+L++ + + E +++SRL H VKL+ +D
Sbjct: 56 REYAIKILEKRHIIKENKVPY----VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY 111
Query: 577 IHNGSLESHLHGDDKVNGPLDWDARMKIA-LGAARGLAYLHEDSSPRVIHRDFKSSNILL 635
NG L ++ + R A + +A L YLH +IHRD K NILL
Sbjct: 112 AKNGELLKYIRKIGSFDET---CTRFYTAEIVSA--LEYLHGKG---IIHRDLKPENILL 163
Query: 636 EHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVK-----SDVYSY 690
D +++DFG A+ E + + +GT Y++PE L K SD+++
Sbjct: 164 NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL-----LTEKSACKSSDLWAL 218
Query: 691 GVVLLELLTGRKP 703
G ++ +L+ G P
Sbjct: 219 GCIIYQLVAGLPP 231
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348 | Back alignment and structure |
|---|
Score = 99.8 bits (249), Expect = 1e-22
Identities = 63/210 (30%), Positives = 92/210 (43%), Gaps = 20/210 (9%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREF---LAELEMLSRLHHRN 556
F R IG G FG VY + + VA+K + + + ++ + E+ L +L H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 557 LVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLH 616
++ G + ++ LV E GS L PL + GA +GLAYLH
Sbjct: 116 TIQYRGCYLREHTAWLVMEYC-LGSASDLLE---VHKKPLQEVEIAAVTHGALQGLAYLH 171
Query: 617 EDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYA 676
S +IHRD K+ NILL K+ DFG A S +GT ++APE
Sbjct: 172 ---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM----APANS--FVGTPYWMAPEVI 222
Query: 677 MTGHLL---VKSDVYSYGVVLLELLTGRKP 703
+ K DV+S G+ +EL + P
Sbjct: 223 LAMDEGQYDGKVDVWSLGITCIELAERKPP 252
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362 | Back alignment and structure |
|---|
Score = 99.7 bits (249), Expect = 1e-22
Identities = 55/219 (25%), Positives = 83/219 (37%), Gaps = 37/219 (16%)
Query: 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGG--REF---------LAELEMLSRLH 553
R I G +G V G+ +G VA+K + G L E+ +L+ H
Sbjct: 28 RFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFH 87
Query: 554 HRNLVKLFGVCIEDNNRC-----LVYELIHNGSLESHLHGDDKV----NGPLDWDARMK- 603
H N++ L + + LV EL + + L +V + ++
Sbjct: 88 HPNILGLRDIFVHFEEPAMHKLYLVTEL-----MRTDLA---QVIHDQRIVIS-PQHIQY 138
Query: 604 IALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTH 663
GL LH V+HRD NILL + + DF LAR + N TH
Sbjct: 139 FMYHILLGLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLAREDTADAN---KTH 192
Query: 664 VMGTFGYLAPEYAMTGHLLVKS-DVYSYGVVLLELLTGR 701
+ Y APE M K D++S G V+ E+ +
Sbjct: 193 YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362 | Back alignment and structure |
|---|
Score = 99.7 bits (249), Expect = 1e-22
Identities = 61/245 (24%), Positives = 100/245 (40%), Gaps = 52/245 (21%)
Query: 483 TGTAKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGRE 541
G F +N K ++ + +G+G F VV R + G E A K++
Sbjct: 13 MGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF 72
Query: 542 --FLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDW- 598
E + +L H N+V+L E++ LV++L+ G L +
Sbjct: 73 QKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL-------------FEDI 119
Query: 599 ---------DAR--MKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEH---DFTPKVS 644
DA ++ L + +AY H + ++HR+ K N+LL K++
Sbjct: 120 VAREFYSEADASHCIQQILES---IAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLA 173
Query: 645 DFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKS------DVYSYGVVLLELL 698
DFGLA +++ GT GYL+PE +L K D+++ GV+L LL
Sbjct: 174 DFGLAIE-VNDSEA-WHGFA-GTPGYLSPE------VLKKDPYSKPVDIWACGVILYILL 224
Query: 699 TGRKP 703
G P
Sbjct: 225 VGYPP 229
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308 | Back alignment and structure |
|---|
Score = 97.6 bits (244), Expect = 3e-22
Identities = 64/216 (29%), Positives = 95/216 (43%), Gaps = 37/216 (17%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGG---------REFLAELEMLSRLHHRN 556
IG G +G VY+ G VA+K ++ N GG RE +A L L H N
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVRE-VALLRRLEAFEHPN 75
Query: 557 LVKLFGVCIEDNNRC-----LVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARG 611
+V+L VC LV+E + L ++L D L + + RG
Sbjct: 76 VVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL--DKAPPPGLPAETIKDLMRQFLRG 132
Query: 612 LAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYL 671
L +LH + ++HRD K NIL+ T K++DFGLAR + T V+ T Y
Sbjct: 133 LDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALTPVVVTLWYR 186
Query: 672 APEYAMTGHLLVKS------DVYSYGVVLLELLTGR 701
APE +L++S D++S G + E+ +
Sbjct: 187 APE------VLLQSTYATPVDMWSVGCIFAEMFRRK 216
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361 | Back alignment and structure |
|---|
Score = 98.2 bits (245), Expect = 3e-22
Identities = 59/218 (27%), Positives = 92/218 (42%), Gaps = 41/218 (18%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRA---NQHGGREFLAELEMLSRLHHRNLVKL 560
+ IG G FGV VAVK ++R +++ RE + L H N+V+
Sbjct: 26 KDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQRE----IINHRSLRHPNIVRF 81
Query: 561 FGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWD-ARMK----IALGAARGLAYL 615
V + + ++ E G L + G D AR ++ G++Y
Sbjct: 82 KEVILTPTHLAIIMEYASGGELYERI----CNAGRFSEDEARFFFQQLLS-----GVSYC 132
Query: 616 HEDSSPRVIHRDFKSSNILLEHDFTP--KVSDFGLARTALDEGNKHISTHVMGTFGYLAP 673
H S ++ HRD K N LL+ P K+ DFG +++++ + V GT Y+AP
Sbjct: 133 H---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK--STV-GTPAYIAP 186
Query: 674 E------YAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 705
E Y G +DV+S GV L +L G P +
Sbjct: 187 EVLLRQEYD--GK---IADVWSCGVTLYVMLVGAYPFE 219
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371 | Back alignment and structure |
|---|
Score = 98.2 bits (245), Expect = 4e-22
Identities = 63/207 (30%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRA--NQHGGREFLAELEMLSRLHHRNLVKLF 561
+ IG G G+V R VA+K L R NQ + EL ++ ++H+N++ L
Sbjct: 31 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 90
Query: 562 GVCIEDNNRC------LVYELIHNGSLESHLHGDDKVNGPLDWDARMKIAL-GAARGLAY 614
V + +V EL ++++L + LD RM L G+ +
Sbjct: 91 NVFTPQKSLEEFQDVYIVMEL-----MDANLC--QVIQMELD-HERMSYLLYQMLCGIKH 142
Query: 615 LHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPE 674
LH S +IHRD K SNI+++ D T K+ DFGLARTA G + T + T Y APE
Sbjct: 143 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPE 196
Query: 675 YAMTGHLLVKSDVYSYGVVLLELLTGR 701
+ D++S G ++ E++ G
Sbjct: 197 VILGMGYKENVDIWSVGCIMGEMIKGG 223
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351 | Back alignment and structure |
|---|
Score = 97.3 bits (243), Expect = 6e-22
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 35/216 (16%)
Query: 507 IGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLA--ELEMLSRLHHRNLVKLFGV 563
IG+G FG V++ G++VA+K + N+ G A E+++L L H N+V L +
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 564 CIEDNNRC--------LVYE-LIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAY 614
C + LV++ H+ L L V ++ GL Y
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHD--LAGLL---SNVLVKFTLSEIKRVMQMLLNGLYY 139
Query: 615 LHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIS--THVMGTFGYLA 672
+H + +++HRD K++N+L+ D K++DFGLAR N + T+ + T Y
Sbjct: 140 IHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRP 196
Query: 673 PEYAMTGHLLVKSDVYSYGV-------VLLELLTGR 701
PE LL+ Y + ++ E+ T
Sbjct: 197 PE------LLLGERDYGPPIDLWGAGCIMAEMWTRS 226
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420 | Back alignment and structure |
|---|
Score = 98.2 bits (245), Expect = 7e-22
Identities = 68/267 (25%), Positives = 107/267 (40%), Gaps = 34/267 (12%)
Query: 451 APAKLSGATTTLRYGSMLSSSSVSIDSCAVTYTGTAKTFTLNDIEKATNGFHTSRIIGEG 510
+ + ++ S S VS D T T + +++IG G
Sbjct: 6 RTTSFAESCKPVQQPSAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNG 65
Query: 511 GFGVVYRGIL-DDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNN 569
FGVVY+ L D G VA +K+ Q + EL+++ +L H N+V+L
Sbjct: 66 SFGVVYQAKLCDSGELVA---IKKVLQDKRFK-NRELQIMRKLDHCNIVRLRYFFYSSGE 121
Query: 570 RC------LVYELIHNGSLESHLHGDDKVNGPLDWDARMKIAL-GAARGLAYLHEDSSPR 622
+ LV + + ++ + L +K+ + R LAY+H S
Sbjct: 122 KKDEVYLNLVLDYV-PETVYRVARHYSRAKQTLP-VIYVKLYMYQLFRSLAYIH---SFG 176
Query: 623 VIHRDFKSSNILL-EHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHL 681
+ HRD K N+LL K+ DFG A+ L G + + + Y APE L
Sbjct: 177 ICHRDIKPQNLLLDPDTAVLKLCDFGSAK-QLVRGEP--NVSYICSRYYRAPE------L 227
Query: 682 LVKS-------DVYSYGVVLLELLTGR 701
+ + DV+S G VL ELL G+
Sbjct: 228 IFGATDYTSSIDVWSAGCVLAELLLGQ 254
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432 | Back alignment and structure |
|---|
Score = 97.5 bits (243), Expect = 1e-21
Identities = 60/275 (21%), Positives = 97/275 (35%), Gaps = 57/275 (20%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLA-----ELEMLSRLHHRNLV 558
+IG G +G VY + + VA+K + R + E+ +L+RL ++
Sbjct: 32 HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFED---LIDCKRILREITILNRLKSDYII 88
Query: 559 KLFGVCIEDNNRC-----LVYELIHNGSLESHLHGDDKVNGPLDWDARMK-IALGAARGL 612
+L+ + I D+ +V E+ +S L K L + +K I G
Sbjct: 89 RLYDLIIPDDLLKFDELYIVLEI-----ADSDLKKLFKTPIFLT-EEHIKTILYNLLLGE 142
Query: 613 AYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLA 672
++H +IHRD K +N LL D + KV DFGLART E + +I +
Sbjct: 143 NFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGP 199
Query: 673 PEYA----MTGH----------LLVKS-------DVYSYGVVLLELLTGRKPVDLSQP-- 709
+T H L++ D++S G + ELL +
Sbjct: 200 HNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNR 259
Query: 710 ----PGQENLVAWARPLLTTKEG------LKTIID 734
PG L I +
Sbjct: 260 FPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFN 294
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326 | Back alignment and structure |
|---|
Score = 95.7 bits (239), Expect = 2e-21
Identities = 65/214 (30%), Positives = 98/214 (45%), Gaps = 35/214 (16%)
Query: 507 IGEGGFGVVYRG--ILDDGREVAVKVLKRANQHGG------REFLAELEMLSRLHHRNLV 558
IGEG +G V++ + + GR VA+K ++ G RE +A L L H N+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIRE-VAVLRHLETFEHPNVV 77
Query: 559 KLFGVCIEDNNRC-----LVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLA 613
+LF VC LV+E + L ++L D + + + RGL
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL--DKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 614 YLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAP 673
+LH S RV+HRD K NIL+ K++DFGLAR + T V+ T Y AP
Sbjct: 135 FLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTLWYRAP 188
Query: 674 EYAMTGHLLVKS------DVYSYGVVLLELLTGR 701
E +L++S D++S G + E+ +
Sbjct: 189 E------VLLQSSYATPVDLWSVGCIFAEMFRRK 216
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 95.0 bits (237), Expect = 3e-21
Identities = 59/222 (26%), Positives = 91/222 (40%), Gaps = 48/222 (21%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRA--NQHGGREFLA-ELEMLSRLHHRNLVKL 560
+GEG FG V ++VA+K + R + + E+ L L H +++KL
Sbjct: 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKL 74
Query: 561 FGVCIEDNNR-CLVYELIHNGSLESHL--HGDDKVNGPLDWDARMKIALGAAR------- 610
+ V I +V E G L ++ RM R
Sbjct: 75 YDV-ITTPTDIVMVIEYA-GGELFDYIVEKK------------RMTED--EGRRFFQQII 118
Query: 611 -GLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFG 669
+ Y H +++HRD K N+LL+ + K++DFGL+ + + T G+
Sbjct: 119 CAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLS--NIMTDGNFLKT-SCGSPN 172
Query: 670 YLAPE------YAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 705
Y APE YA G + DV+S G+VL +L GR P D
Sbjct: 173 YAAPEVINGKLYA--GP---EVDVWSCGIVLYVMLVGRLPFD 209
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 97.2 bits (242), Expect = 3e-21
Identities = 62/222 (27%), Positives = 95/222 (42%), Gaps = 47/222 (21%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRA--NQHGGREFLA-ELEMLSRLHHRNLVKL 560
+G G FG V G G +VAVK+L R + E++ L H +++KL
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 561 FGVCIEDNNR-CLVYELIHNGSLESHL--HGDDKVNGPLDWDARMKIALGAAR------- 610
+ V I + +V E + G L ++ +G R+ +R
Sbjct: 82 YQV-ISTPSDIFMVMEYVSGGELFDYICKNG------------RLDEK--ESRRLFQQIL 126
Query: 611 -GLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFG 669
G+ Y H V+HRD K N+LL+ K++DFGL+ + + + T G+
Sbjct: 127 SGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLS--NMMSDGEFLRTSC-GSPN 180
Query: 670 YLAPE------YAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 705
Y APE YA G + D++S GV+L LL G P D
Sbjct: 181 YAAPEVISGRLYA--G---PEVDIWSSGVILYALLCGTLPFD 217
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 98.0 bits (244), Expect = 4e-21
Identities = 65/218 (29%), Positives = 95/218 (43%), Gaps = 33/218 (15%)
Query: 501 FHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRA---NQHGGREFLAE---LEMLSRLH 553
F RIIG GGFG VY D G+ A+K L + + G L E L ++S
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 554 HRNLVKLFGVCIEDNNR-CLVYELIHNGSLESHLHGDDKVNGPLDWDARMK-----IALG 607
+V + ++ + +L++ G L HL + +A M+ I LG
Sbjct: 251 CPFIVCMSY-AFHTPDKLSFILDLMNGGDLHYHLSQHGVFS-----EADMRFYAAEIILG 304
Query: 608 AARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVM-G 666
L ++H V++RD K +NILL+ ++SD GLA + H G
Sbjct: 305 ----LEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-----PHASVG 352
Query: 667 TFGYLAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKP 703
T GY+APE G S D +S G +L +LL G P
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405 | Back alignment and structure |
|---|
Score = 95.2 bits (237), Expect = 6e-21
Identities = 54/219 (24%), Positives = 92/219 (42%), Gaps = 38/219 (17%)
Query: 507 IGEGGFGVVYRGILDD---GREVAVKVLKRANQHGGREFLA--ELEMLSRLHHRNLVKLF 561
+G G +G VY+ D ++ A+K ++ G A E+ +L L H N++ L
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGT----GISMSACREIALLRELKHPNVISLQ 84
Query: 562 GVCIEDNNRC--LVYELIHN---GSLESHLHGD-DKVNGPLDWDARMKIALGAARGLAYL 615
V + +R L+++ + ++ H +K L + G+ YL
Sbjct: 85 KVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYL 144
Query: 616 HEDSSPRVIHRDFKSSNILLEHDFTP----KVSDFGLARTALDEGNK--HISTHVMGTFG 669
H + V+HRD K +NIL+ + K++D G AR + V+ TF
Sbjct: 145 H---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVV-TFW 200
Query: 670 YLAPEYAMTGHLLVKS-------DVYSYGVVLLELLTGR 701
Y APE LL+ + D+++ G + ELLT
Sbjct: 201 YRAPE------LLLGARHYTKAIDIWAIGCIFAELLTSE 233
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 92.8 bits (231), Expect = 1e-20
Identities = 57/222 (25%), Positives = 90/222 (40%), Gaps = 39/222 (17%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRAN-------QHGGREFLAELEMLSRLH--- 553
++G+GGFG V+ G L D +VA+KV+ R L E+ +L ++
Sbjct: 37 PLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPL-EVALLWKVGAGG 95
Query: 554 -HRNLVKLFGVCIEDNNR-CLVYELIHNGSLESHLHGD--DKV--NGPLDWD-ARMKIAL 606
H +++L E LV E D D + GPL +R
Sbjct: 96 GHPGVIRLLDW-FETQEGFMLVLERPLPA-------QDLFDYITEKGPLGEGPSR-CFFG 146
Query: 607 GAARGLAYLHEDSSPRVIHRDFKSSNILL-EHDFTPKVSDFGLARTALDEGNKHISTHVM 665
+ + H S V+HRD K NIL+ K+ DFG DE +
Sbjct: 147 QVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDE---PYTDFD- 199
Query: 666 GTFGYLAPEYAMTGHLLV--KSDVYSYGVVLLELLTGRKPVD 705
GT Y PE+ ++ H + V+S G++L +++ G P +
Sbjct: 200 GTRVYSPPEW-ISRHQYHALPATVWSLGILLYDMVCGDIPFE 240
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 96.0 bits (239), Expect = 1e-20
Identities = 63/210 (30%), Positives = 101/210 (48%), Gaps = 18/210 (8%)
Query: 501 FHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRAN---QHGGREFLAELEMLSRLHHRN 556
F R++G+GGFG V + G+ A K L++ + G L E ++L +++ R
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 557 LVKLFGVCIEDNNR-CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYL 615
+V L E + CLV L++ G L+ H++ + P A A GL L
Sbjct: 246 VVSLAY-AYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEA-RAVFYAA-EICCGLEDL 302
Query: 616 HEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPE- 674
H + R+++RD K NILL+ ++SD GLA + + I V GT GY+APE
Sbjct: 303 HRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE--GQTIKGRV-GTVGYMAPEV 356
Query: 675 YAMTGHLLVKS-DVYSYGVVLLELLTGRKP 703
+ S D ++ G +L E++ G+ P
Sbjct: 357 VKNERY--TFSPDWWALGCLLYEMIAGQSP 384
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336 | Back alignment and structure |
|---|
Score = 93.2 bits (232), Expect = 1e-20
Identities = 48/214 (22%), Positives = 88/214 (41%), Gaps = 31/214 (14%)
Query: 503 TSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRL-HHRNLVKL 560
+ +++G G G V G++ A+K+L + + E++ + ++V +
Sbjct: 33 SKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKARQEVDHHWQASGGPHIVCI 87
Query: 561 FGVCIEDNNRC-----LVYELIHNGSLESHLHGDDKVNGPLD-WDAR--MKIALGAARGL 612
V E+ + ++ E + G L S + ++ + +A M+ A +
Sbjct: 88 LDVY-ENMHHGKRCLLIIMECMEGGELFSRIQ--ERGDQAFTEREAAEIMRDIGTA---I 141
Query: 613 AYLHEDSSPRVIHRDFKSSNILLEH---DFTPKVSDFGLARTALDEGNKHISTHVMGTFG 669
+LH S + HRD K N+L D K++DFG A+ + T T
Sbjct: 142 QFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET---TQNALQTPC-YTPY 194
Query: 670 YLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
Y+APE D++S GV++ LL G P
Sbjct: 195 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPP 228
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330 | Back alignment and structure |
|---|
Score = 93.1 bits (232), Expect = 1e-20
Identities = 49/214 (22%), Positives = 96/214 (44%), Gaps = 40/214 (18%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRL-HHRNLVKLFG 562
R +G G + V+ I + + +V VK+LK + ++ E+++L L N++ L
Sbjct: 42 RKLGRGKYSEVFEAINITNNEKVVVKILKPVKK---KKIKREIKILENLRGGPNIITLAD 98
Query: 563 VCIEDNNRCLVYELIHNGSLESHLHGDD--KVNGPL-DWDAR--MKIALGAARGLAYLHE 617
+ + +R + H++ D ++ L D+D R M L + L Y H
Sbjct: 99 IVKDPVSRTPAL-------VFEHVNNTDFKQLYQTLTDYDIRFYMYEIL---KALDYCH- 147
Query: 618 DSSPRVIHRDFKSSNILLEHDF-TPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYA 676
S ++HRD K N++++H+ ++ D+GLA G ++ + + + PE
Sbjct: 148 --SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY-HPGQEY--NVRVASRYFKGPE-- 200
Query: 677 MTGHLLVKS-------DVYSYGVVLLELLTGRKP 703
LLV D++S G +L ++ ++P
Sbjct: 201 ----LLVDYQMYDYSLDMWSLGCMLASMIFRKEP 230
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464 | Back alignment and structure |
|---|
Score = 94.9 bits (236), Expect = 1e-20
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 28/213 (13%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLA-----ELEMLSRLHH 554
+ + IG G G+V R VA+K L R Q+ + A EL ++ ++H
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN---QTHAKRAYRELVLMKCVNH 120
Query: 555 RNLVKLFGVCIEDNNRC------LVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGA 608
+N++ L V LV EL ++++L + LD + +
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMEL-----MDANLC--QVIQMELDHERMSYLLYQM 173
Query: 609 ARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTF 668
G+ +LH S +IHRD K SNI+++ D T K+ DFGLARTA G + T + T
Sbjct: 174 LCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTR 227
Query: 669 GYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGR 701
Y APE + D++S G ++ E++ +
Sbjct: 228 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320 | Back alignment and structure |
|---|
Score = 92.7 bits (231), Expect = 1e-20
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 33/218 (15%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGV 563
+ +G GG G+V+ + D + VA+K + + + L E++++ RL H N+VK+F +
Sbjct: 17 KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEI 76
Query: 564 CIEDNNRC--------------LVYELIHNGSLESHLHGDDKV--NGPLDWDARMK-IAL 606
++ +V E +E+ L V GPL + +
Sbjct: 77 LGPSGSQLTDDVGSLTELNSVYIVQEY-----METDLA---NVLEQGPLL-EEHARLFMY 127
Query: 607 GAARGLAYLHEDSSPRVIHRDFKSSNILL-EHDFTPKVSDFGLARTALDE-GNKHISTHV 664
RGL Y+H S V+HRD K +N+ + D K+ DFGLAR +K +
Sbjct: 128 QLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEG 184
Query: 665 MGTFGYLAPEYAMTGHLLVKS-DVYSYGVVLLELLTGR 701
+ T Y +P ++ + K+ D+++ G + E+LTG+
Sbjct: 185 LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 93.1 bits (231), Expect = 2e-20
Identities = 58/268 (21%), Positives = 98/268 (36%), Gaps = 69/268 (25%)
Query: 505 RIIGEGGFGVVYRGIL------DDGREVAVKVLKR-ANQHGGREFLAELEMLSRL-HHRN 556
+ +G G FG V R VAVK+LK A R ++EL++L + HH N
Sbjct: 28 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 87
Query: 557 LVKLFGVCIEDNNR-CLVYELIHNGSLESHLH-------------------GDDKVNGPL 596
+V L G C + ++ E G+L ++L D P+
Sbjct: 88 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPV 147
Query: 597 DWDARMKIALGA----------ARGLAYLHEDSSPRVIHRDFKSSNILLE---------- 636
D R+ + + L+ + E+ +P +++DF + L+
Sbjct: 148 DLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGME 207
Query: 637 --------------------HDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYA 676
K+ DFGLAR + + ++APE
Sbjct: 208 FLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 267
Query: 677 MTGHLLVKSDVYSYGVVLLELLT-GRKP 703
++SDV+S+GV+L E+ + G P
Sbjct: 268 FDRVYTIQSDVWSFGVLLWEIFSLGASP 295
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367 | Back alignment and structure |
|---|
Score = 93.2 bits (232), Expect = 2e-20
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 34/212 (16%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLA-----ELEMLSRLHHRNLV 558
+ +G G +G V + G +VA+K L R Q E A EL +L + H N++
Sbjct: 31 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQS---ELFAKRAYRELRLLKHMRHENVI 87
Query: 559 KLFGVCIEDNNRC------LVYELIHNGSLESHLHGDDKV--NGPLDWDARMKIALGAAR 610
L V D LV + + L K+ + L D + +
Sbjct: 88 GLLDVFTPDETLDDFTDFYLVMPF-----MGTDLG---KLMKHEKLGEDRIQFLVYQMLK 139
Query: 611 GLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGY 670
GL Y+H + +IHRD K N+ + D K+ DFGLAR A E T + T Y
Sbjct: 140 GLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE-----MTGYVVTRWY 191
Query: 671 LAPEYAMTGHLLVKS-DVYSYGVVLLELLTGR 701
APE + ++ D++S G ++ E++TG+
Sbjct: 192 RAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353 | Back alignment and structure |
|---|
Score = 92.7 bits (231), Expect = 2e-20
Identities = 59/227 (25%), Positives = 92/227 (40%), Gaps = 53/227 (23%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVL---------KRANQHGGREFLAELEMLSRLHH 554
++GEG +GVV G VA+K + R L E+++L H
Sbjct: 17 SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT--------LREIKILKHFKH 68
Query: 555 RNLVKLFGVCIEDNNRC-----LVYELIHNGSLESHLHGDDKV--NGPLDWDARMKI--- 604
N++ +F + D+ ++ EL +++ LH +V L D ++
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQEL-----MQTDLH---RVISTQMLS-DDHIQYFIY 119
Query: 605 -ALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTH 663
L R + LH VIHRD K SN+L+ + KV DFGLAR + +
Sbjct: 120 QTL---RAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT 173
Query: 664 VMGTFG--------YLAPEYAMTGHLLVKS-DVYSYGVVLLELLTGR 701
+ Y APE +T ++ DV+S G +L EL R
Sbjct: 174 GQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 92.7 bits (231), Expect = 2e-20
Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 33/215 (15%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLA-----ELEMLSRLHH 554
+ + +G G +G V I G +VA+K L R Q E A EL +L + H
Sbjct: 26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQS---EIFAKRAYRELLLLKHMQH 82
Query: 555 RNLVKLFGVCIEDNNRC------LVYELIHNGSLESHLHGDDKVNGPLDWDARMK-IALG 607
N++ L V ++ LV +++ L + + +++ +
Sbjct: 83 ENVIGLLDVFTPASSLRNFYDFYLVMPF-----MQTDLQ--KIMGLKFS-EEKIQYLVYQ 134
Query: 608 AARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGT 667
+GL Y+H S V+HRD K N+ + D K+ DFGLAR A E T + T
Sbjct: 135 MLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE-----MTGYVVT 186
Query: 668 FGYLAPEYAMTGHLLVKS-DVYSYGVVLLELLTGR 701
Y APE ++ ++ D++S G ++ E+LTG+
Sbjct: 187 RWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458 | Back alignment and structure |
|---|
Score = 93.7 bits (233), Expect = 4e-20
Identities = 52/245 (21%), Positives = 89/245 (36%), Gaps = 48/245 (19%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLA-----ELEMLSRLHHRNLV 558
+IG G +G V + R VA+K + R + E+ +L+RL+H ++V
Sbjct: 59 HLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFED---LIDCKRILREIAILNRLNHDHVV 115
Query: 559 KLFGVCIEDNNRC-----LVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLA 613
K+ + I + +V E+ +S + L + G+
Sbjct: 116 KVLDIVIPKDVEKFDELYVVLEI-----ADSDFKKLFRTPVYLTELHIKTLLYNLLVGVK 170
Query: 614 YLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAP 673
Y+H S ++HRD K +N L+ D + KV DFGLART N + + +
Sbjct: 171 YVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNL 227
Query: 674 EYA---------MTGH----------LLVKSDVYSYGV-------VLLELLTGRKPVDLS 707
+TGH L++ + Y+ + + ELL K
Sbjct: 228 VTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAY 287
Query: 708 QPPGQ 712
Sbjct: 288 HADRG 292
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 5e-20
Identities = 53/220 (24%), Positives = 91/220 (41%), Gaps = 37/220 (16%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRAN-------QHGGREFLAELEMLSRLHHR- 555
++G GGFG VY GI + D VA+K +++ +G R + E+ +L ++
Sbjct: 49 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM-EVVLLKKVSSGF 107
Query: 556 -NLVKLFGVCIEDNNR-CLVYELIHNGSLESHLHGD--DKV--NGPLDWD-ARMKIALGA 608
+++L E + L+ E D D + G L + AR
Sbjct: 108 SGVIRLLDW-FERPDSFVLILERPEPV-------QDLFDFITERGALQEELAR-SFFWQV 158
Query: 609 ARGLAYLHEDSSPRVIHRDFKSSNILL-EHDFTPKVSDFGLARTALDEGNKHISTHVMGT 667
+ + H + V+HRD K NIL+ + K+ DFG D + GT
Sbjct: 159 LEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFD-GT 211
Query: 668 FGYLAPEYAMTGHLLV--KSDVYSYGVVLLELLTGRKPVD 705
Y PE+ + H + V+S G++L +++ G P +
Sbjct: 212 RVYSPPEW-IRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 250
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 7e-20
Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 46/224 (20%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVL---------KRANQHGGREFLAELEMLS 550
+ IGEG +G+V + VA+K + +R L E+++L
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT--------LREIKILL 80
Query: 551 RLHHRNLVKLFGVCIEDNNRC-----LVYELIHNGSLESHLHGDDKV--NGPLDWDARMK 603
R H N++ + + +V +L +E+ L+ K+ L + +
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDL-----METDLY---KLLKTQHLS-NDHIC 131
Query: 604 I----ALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTA-LDEGNK 658
L RGL Y+H S V+HRD K SN+LL K+ DFGLAR A D +
Sbjct: 132 YFLYQIL---RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 185
Query: 659 HISTHVMGTFGYLAPEYAMTGHLLVKS-DVYSYGVVLLELLTGR 701
T + T Y APE + KS D++S G +L E+L+ R
Sbjct: 186 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 92.0 bits (229), Expect = 7e-20
Identities = 63/231 (27%), Positives = 98/231 (42%), Gaps = 38/231 (16%)
Query: 487 KTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGIL----DDGREVAVKVLKRAN---QHGG 539
+ + F R IG+G FG V + D + A+K + + ++
Sbjct: 10 EDVNFDH-------FEILRAIGKGSFGKVC---IVQKNDTKKMYAMKYMNKQKCVERNEV 59
Query: 540 REFLAELEMLSRLHHRNLVKLFGVCIEDNNR-CLVYELIHNGSLESHLHGDDKVNGPLDW 598
R EL+++ L H LV L+ +D +V +L+ G L HL +
Sbjct: 60 RNVFKELQIMQGLEHPFLVNLWY-SFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEE--- 115
Query: 599 DARMKIA-LGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN 657
++ I L A L YL + R+IHRD K NILL+ ++DF +A L
Sbjct: 116 TVKLFICELVMA--LDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAM-LPRET 169
Query: 658 KHISTHVMGTFGYLAPE----YAMTGHLLVKS-DVYSYGVVLLELLTGRKP 703
+ + + GT Y+APE G+ + D +S GV ELL GR+P
Sbjct: 170 QITT--MAGTKPYMAPEMFSSRKGAGYS--FAVDWWSLGVTAYELLRGRRP 216
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388 | Back alignment and structure |
|---|
Score = 91.3 bits (227), Expect = 9e-20
Identities = 61/229 (26%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLA-----ELEMLSRLH-HRNL 557
+ +G+G +G+V++ I G VAVK + A Q+ A E+ +L+ L H N+
Sbjct: 15 KKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQN---STDAQRTFREIMILTELSGHENI 71
Query: 558 VKLFGVCIEDNNRC--LVYELIHNGSLESHLHGDDKV--NGPLDWDARMK-IALGAARGL 612
V L V DN+R LV++ +E+ LH V L+ + + + +
Sbjct: 72 VNLLNVLRADNDRDVYLVFDY-----METDLH---AVIRANILE-PVHKQYVVYQLIKVI 122
Query: 613 AYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLA 672
YLH S ++HRD K SNILL + KV+DFGL+R+ ++ + +
Sbjct: 123 KYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTEN 179
Query: 673 PEY---AMTGH----------LLVKS-------DVYSYGVVLLELLTGR 701
+ +T + +L+ S D++S G +L E+L G+
Sbjct: 180 FDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437 | Back alignment and structure |
|---|
Score = 91.4 bits (227), Expect = 2e-19
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 24/216 (11%)
Query: 501 FHTSRIIGEGGFGVVY--RGILDDGREVAVKVLKRAN--QHGGRE-FLAELEMLSRLHHR 555
F ++IG G FG V + + + A+K+L + + F E ++L +
Sbjct: 76 FEILKVIGRGAFGEVAVVKLK-NADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSK 134
Query: 556 NLVKLFGVCIEDNNR-CLVYELIHNGSLESHLHGDDKVNGPLDWD-ARMKIA-LGAARGL 612
+ L +D+N LV + G L + L K L + AR +A + A +
Sbjct: 135 WITTLHY-AFQDDNNLYLVMDYYVGGDLLTLL---SKFEDRLPEEMARFYLAEMVIA--I 188
Query: 613 AYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLA 672
+H +HRD K NIL++ + +++DFG +++G S V GT Y++
Sbjct: 189 DSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAV-GTPDYIS 244
Query: 673 PEYAMTGHLLVKS-----DVYSYGVVLLELLTGRKP 703
PE D +S GV + E+L G P
Sbjct: 245 PEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 90.2 bits (224), Expect = 3e-19
Identities = 62/284 (21%), Positives = 102/284 (35%), Gaps = 47/284 (16%)
Query: 439 RQPEQTPHDVICAPAKLSGATTTLRYGSMLSSSSVSIDSCAVTYTGTAKTFTLNDIEKAT 498
Q P P + V K + D K T
Sbjct: 7 GQSPPVPFPAPAPPPQPPTPALPHPPAQPPPPPPQQFPQFHVKSGLQIKKNAIIDDYKVT 66
Query: 499 NGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRL-HHRN 556
S+++G G G V + + A+K+L+ + E+E+ R +
Sbjct: 67 -----SQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPH 116
Query: 557 LVKLFGVCIEDNNRC-----LVYELIHNGSLESHLHGDDKVNGPLD-WDAR--MKIALGA 608
+V++ V E+ +V E + G L S + D+ + +A MK A
Sbjct: 117 IVRIVDVY-ENLYAGRKCLLIVMECLDGGELFSRIQ--DRGDQAFTEREASEIMKSIGEA 173
Query: 609 ARGLAYLHEDSSPRVIHRDFKSSNILLEH---DFTPKVSDFGLARTALDEGNKHISTHVM 665
+ YLH S + HRD K N+L + K++DFG A+ + ++T
Sbjct: 174 ---IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPC- 224
Query: 666 GTFGYLAPEYAMTGHLLVKS------DVYSYGVVLLELLTGRKP 703
T Y+APE +L D++S GV++ LL G P
Sbjct: 225 YTPYYVAPE------VLGPEKYDKSCDMWSLGVIMYILLCGYPP 262
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383 | Back alignment and structure |
|---|
Score = 89.0 bits (221), Expect = 6e-19
Identities = 54/257 (21%), Positives = 96/257 (37%), Gaps = 70/257 (27%)
Query: 495 EKATNGFHTSRIIGEGGFGVVYRGI-LDDGREVAVK-VL---KRANQHGGREFLAELEML 549
E ++ + + +G G FG+V ++ G+ A+K VL + N RE L+++
Sbjct: 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKN----RE----LDIM 54
Query: 550 SRLHHRNLVKL---FGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGP----------- 595
L H N++KL F ++ + HN + ++
Sbjct: 55 KVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLN 114
Query: 596 -------------LDWDARMKIALGAA----------RGLAYLHEDSSPRVIHRDFKSSN 632
L R ++ R + ++H S + HRD K N
Sbjct: 115 VIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH---SLGICHRDIKPQN 171
Query: 633 ILL-EHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKS------ 685
+L+ D T K+ DFG A+ L ++ + Y APE L++ +
Sbjct: 172 LLVNSKDNTLKLCDFGSAK-KLIPSEPSVAYIC--SRFYRAPE------LMLGATEYTPS 222
Query: 686 -DVYSYGVVLLELLTGR 701
D++S G V EL+ G+
Sbjct: 223 IDLWSIGCVFGELILGK 239
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367 | Back alignment and structure |
|---|
Score = 88.5 bits (220), Expect = 7e-19
Identities = 64/208 (30%), Positives = 91/208 (43%), Gaps = 26/208 (12%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHG--GREFLAELEMLSRLHHRNLVKLF 561
+G G +G V G VAVK L R Q + EL +L + H N++ L
Sbjct: 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 562 GVCIEDNNRC------LVYELIHNGSLESHLHGDDKVNGPLDWDARMK-IALGAARGLAY 614
V + LV L + + L+ K L D ++ + RGL Y
Sbjct: 95 DVFTPARSLEEFNDVYLVTHL-----MGADLNNIVKCQ-KLT-DDHVQFLIYQILRGLKY 147
Query: 615 LHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPE 674
+H S +IHRD K SN+ + D K+ DFGLAR DE T + T Y APE
Sbjct: 148 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPE 199
Query: 675 YAMTGHLLVKS-DVYSYGVVLLELLTGR 701
+ ++ D++S G ++ ELLTGR
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
|
| >3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325 | Back alignment and structure |
|---|
Score = 87.6 bits (218), Expect = 9e-19
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 29/216 (13%)
Query: 501 FHTSRIIGEGGFGVVY----RGILDDGREVAVKVLKRAN--QHGGREFLAELEMLSRLHH 554
F +++G+G FG V+ D + A+KVLK+A E ++L ++H
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 555 RNLVKLFGVCIEDNNR-CLVYELIHNGSLESHLHGDDKVNGPLDWDARM---KIALGAAR 610
+VKL + + L+ + + G L + L + D + ++AL
Sbjct: 86 PFIVKLH-YAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEE---DVKFYLAELALA--- 138
Query: 611 GLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVM-GTFG 669
L +LH +I+RD K NILL+ + K++DFGL++ ++D K + GT
Sbjct: 139 -LDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK---AYSFCGTVE 191
Query: 670 YLAPE-YAMTGHLLVKS-DVYSYGVVLLELLTGRKP 703
Y+APE GH +S D +S+GV++ E+LTG P
Sbjct: 192 YMAPEVVNRRGH--TQSADWWSFGVLMFEMLTGTLP 225
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 88.6 bits (220), Expect = 1e-18
Identities = 53/222 (23%), Positives = 87/222 (39%), Gaps = 34/222 (15%)
Query: 501 FHTSRIIGEGGFGVVY--RGILDDGREVAVKVLKRAN-------QHGGREFLAELEMLSR 551
F ++IG G F V + G+ A+K++ + + F E ++L
Sbjct: 63 FEILKVIGRGAFSEVAVVKMK-QTGQVYAMKIMNKWDMLKRGEVSC----FREERDVLVN 117
Query: 552 LHHRNLVKLFGVCIEDNNR-CLVYELIHNGSLESHL-HGDDKVNGPLDWDARMKIA-LGA 608
R + +L +D N LV E G L + L +++ P + AR +A +
Sbjct: 118 GDRRWITQLHF-AFQDENYLYLVMEYYVGGDLLTLLSKFGERI--PAEM-ARFYLAEIVM 173
Query: 609 ARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTF 668
A + +H +HRD K NILL+ +++DFG +G V GT
Sbjct: 174 A--IDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAV-GTP 227
Query: 669 GYLAPEYAMTGHLLVKSDVY-------SYGVVLLELLTGRKP 703
YL+PE + Y + GV E+ G+ P
Sbjct: 228 DYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350 | Back alignment and structure |
|---|
Score = 87.7 bits (218), Expect = 1e-18
Identities = 61/234 (26%), Positives = 101/234 (43%), Gaps = 45/234 (19%)
Query: 485 TAKTFTLNDIEKATNGFHTSRIIGEGGFGVVY--RGILDDGREVAVKVLKRAN------- 535
+ T L+ F + +G G FG V + + G A+K+L +
Sbjct: 34 SQNTAQLDQ-------FDRIKTLGTGSFGRVMLVKHK-ESGNHYAMKILDKQKVVKLKQI 85
Query: 536 QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGP 595
+H L E +L ++ LVKL +++N +V E + G + SHL + + P
Sbjct: 86 EH----TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP 141
Query: 596 LDWDARM---KIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTA 652
AR +I L YLH +I+RD K N+L++ +V+DFG A+
Sbjct: 142 H---ARFYAAQIVL----TFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Query: 653 LDEGNKHISTHVM-GTFGYLAPEYAMT-GHLLVKS-DVYSYGVVLLELLTGRKP 703
T + GT LAPE ++ G+ K+ D ++ GV++ E+ G P
Sbjct: 192 KG------RTWTLCGTPEALAPEIILSKGY--NKAVDWWALGVLIYEMAAGYPP 237
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 87.9 bits (218), Expect = 2e-18
Identities = 68/244 (27%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 470 SSSVSIDSCAVTYTGTAKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGIL----DDGRE 525
S + + V+ T+N+ F +++G+G FG V IL GR
Sbjct: 126 SDNSGAEEMEVSLAKPKHRVTMNE-------FEYLKLLGKGTFGKV---ILVKEKATGRY 175
Query: 526 VAVKVLKRANQHGGREF---LAELEMLSRLHHRNLVKLFGVCIEDNNR-CLVYELIHNGS 581
A+K+LK+ E L E +L H L L + ++R C V E + G
Sbjct: 176 YAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY-SFQTHDRLCFVMEYANGGE 234
Query: 582 LESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTP 641
L HL + + AR A L YLH + + V++RD K N++L+ D
Sbjct: 235 LFFHLSRERVFSED---RARFYGA-EIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHI 288
Query: 642 KVSDFGLARTALDEGNKHISTHVM-GTFGYLAPEYAMTGHLLVKS-DVYSYGVVLLELLT 699
K++DFGL + + +G GT YLAPE + + ++ D + GVV+ E++
Sbjct: 289 KITDFGLCKEGIKDGAT---MKTFCGTPEYLAPE-VLEDNDYGRAVDWWGLGVVMYEMMC 344
Query: 700 GRKP 703
GR P
Sbjct: 345 GRLP 348
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410 | Back alignment and structure |
|---|
Score = 85.9 bits (213), Expect = 7e-18
Identities = 58/218 (26%), Positives = 89/218 (40%), Gaps = 31/218 (14%)
Query: 501 FHTSRIIGEGGFGVVY--RGILDDGREVAVKVLKRAN-------QHGGREFLAELEMLSR 551
+ ++IG G FG V R + A+K+L + F E ++++
Sbjct: 71 YEVVKVIGRGAFGEVQLVRHK-STRKVYAMKLLSKFEMIKRSDSAF----FWEERDIMAF 125
Query: 552 LHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWD-ARMKIA-LGAA 609
+ +V+LF +D +V E + G L + + N + AR A + A
Sbjct: 126 ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS-----NYDVPEKWARFYTAEVVLA 180
Query: 610 RGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFG 669
L +H S IHRD K N+LL+ K++DFG EG T V GT
Sbjct: 181 --LDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPD 234
Query: 670 YLAPEYAMTGHLLVK----SDVYSYGVVLLELLTGRKP 703
Y++PE + D +S GV L E+L G P
Sbjct: 235 YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318 | Back alignment and structure |
|---|
Score = 82.6 bits (205), Expect = 4e-17
Identities = 68/230 (29%), Positives = 106/230 (46%), Gaps = 45/230 (19%)
Query: 489 FTLNDIEKATNGFHTSRIIGEGGFGVVY--RGILDDGREVAVKVLK-----RANQ--HGG 539
++L D F R +G G FG V+ R +GR A+KVLK R Q H
Sbjct: 3 YSLQD-------FQILRTLGTGSFGRVHLIRSR-HNGRYYAMKVLKKEIVVRLKQVEH-- 52
Query: 540 REFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWD 599
E MLS + H +++++G + ++ + I G L S L + P
Sbjct: 53 --TNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNP---V 107
Query: 600 ARM---KIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEG 656
A+ ++ L L YLH +I+RD K NILL+ + K++DFG A+ D
Sbjct: 108 AKFYAAEVCL----ALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPD-- 158
Query: 657 NKHISTHVM-GTFGYLAPE-YAMTGHLLVKS-DVYSYGVVLLELLTGRKP 703
T+ + GT Y+APE + + KS D +S+G+++ E+L G P
Sbjct: 159 ----VTYTLCGTPDYIAPEVVSTKPY--NKSIDWWSFGILIYEMLAGYTP 202
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327 | Back alignment and structure |
|---|
Score = 81.8 bits (203), Expect = 7e-17
Identities = 66/240 (27%), Positives = 109/240 (45%), Gaps = 40/240 (16%)
Query: 484 GTAKTFTLNDIEKAT-NGFHTSRIIGEGGFGVVY----RGILDDGREVAVKVLKRAN--- 535
G+++T EK F R++G+GG+G V+ + G+ A+KVLK+A
Sbjct: 1 GSSETSVNRGPEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVR 60
Query: 536 -----QHGGREFLAELEMLSRLHHRNLVKLFGVCIEDNNR-CLVYELIHNGSLESHLHGD 589
H AE +L + H +V L + + L+ E + G L L +
Sbjct: 61 NAKDTAH----TKAERNILEEVKHPFIVDLI-YAFQTGGKLYLILEYLSGGELFMQLERE 115
Query: 590 DKVNGPLDWDARM---KIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDF 646
A +I++ L +LH+ +I+RD K NI+L H K++DF
Sbjct: 116 GIFMED---TACFYLAEISMA----LGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDF 165
Query: 647 GLARTALDEGNKHISTHVM-GTFGYLAPE-YAMTGHLLVKS-DVYSYGVVLLELLTGRKP 703
GL + ++ +G TH GT Y+APE +GH ++ D +S G ++ ++LTG P
Sbjct: 166 GLCKESIHDGTV---THTFCGTIEYMAPEILMRSGH--NRAVDWWSLGALMYDMLTGAPP 220
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 1e-16
Identities = 63/252 (25%), Positives = 112/252 (44%), Gaps = 38/252 (15%)
Query: 469 SSSSVSIDSCAVTYTGTAKTFTLNDIEKATNGFHTSRIIGEGGFGVVY----RGILDDGR 524
+V + TG A+ + + F +++G G +G V+ D G+
Sbjct: 31 QLLTVKHELRTANLTGHAEKVGIEN-------FELLKVLGTGAYGKVFLVRKISGHDTGK 83
Query: 525 EVAVKVLKRANQHGGREF----LAELEMLSRL-HHRNLVKLFGVCIEDNNR-CLVYELIH 578
A+KVLK+A + E ++L + LV L + + L+ + I+
Sbjct: 84 LYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHY-AFQTETKLHLILDYIN 142
Query: 579 NGSLESHLHGDDKVNGPLDWDARM---KIALGAARGLAYLHEDSSPRVIHRDFKSSNILL 635
G L +HL ++ + ++ +I L L +LH+ +I+RD K NILL
Sbjct: 143 GGELFTHLSQRERFTEH---EVQIYVGEIVLA----LEHLHKLG---IIYRDIKLENILL 192
Query: 636 EHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPE---YAMTGHLLVKS-DVYSYG 691
+ + ++DFGL++ + + + GT Y+AP+ +GH K+ D +S G
Sbjct: 193 DSNGHVVLTDFGLSKEFVADETERAYDFC-GTIEYMAPDIVRGGDSGH--DKAVDWWSLG 249
Query: 692 VVLLELLTGRKP 703
V++ ELLTG P
Sbjct: 250 VLMYELLTGASP 261
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337 | Back alignment and structure |
|---|
Score = 79.6 bits (197), Expect = 4e-16
Identities = 62/217 (28%), Positives = 95/217 (43%), Gaps = 33/217 (15%)
Query: 501 FHTSRIIGEGGFGVVYRGIL----DDGREVAVKVLKRANQHGGREF---LAELEMLSRLH 553
F +++G+G FG V IL GR A+K+L++ E + E +L
Sbjct: 7 FDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 554 HRNLVKLFGVCIEDNNR-CLVYELIHNGSLESHLHGDDKVNGPLDWDARM---KIALGAA 609
H L L + ++R C V E + G L HL + AR +I
Sbjct: 64 HPFLTALKY-AFQTHDRLCFVMEYANGGELFFHLSRERVFTEE---RARFYGAEIVSA-- 117
Query: 610 RGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVM-GTF 668
L YLH V++RD K N++L+ D K++DFGL + + +G GT
Sbjct: 118 --LEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT---MKTFCGTP 169
Query: 669 GYLAPE-YAMTGHLLVKS-DVYSYGVVLLELLTGRKP 703
YLAPE + ++ D + GVV+ E++ GR P
Sbjct: 170 EYLAPEVLEDNDY--GRAVDWWGLGVVMYEMMCGRLP 204
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373 | Back alignment and structure |
|---|
Score = 79.8 bits (197), Expect = 6e-16
Identities = 45/227 (19%), Positives = 87/227 (38%), Gaps = 49/227 (21%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLH---------- 553
R +G G F V+ + + VA+K++ R ++ E+++L R++
Sbjct: 25 RKLGWGHFSTVWLAKDMVNNTHVAMKIV-RGDKVYTEAAEDEIKLLQRVNDADNTKEDSM 83
Query: 554 -HRNLVKLFGVCIEDNNR----CLVYELIHNGSLESHLHGDDKVNG--PLDWDARMKIAL 606
+++KL +V+E+ L +L K + +I+
Sbjct: 84 GANHILKLLDHFNHKGPNGVHVVMVFEV-----LGENLLALIKKYEHRGIPLIYVKQISK 138
Query: 607 GAARGLAYLHEDSSPRVIHRDFKSSNILLEH------DFTPKVSDFGLARTALDEGNKHI 660
GL Y+H +IH D K N+L+E K++D G A ++H
Sbjct: 139 QLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACW----YDEHY 192
Query: 661 STHVMGTFGYLAPE------YAMTGHLLVKSDVYSYGVVLLELLTGR 701
+ + Y +PE + +D++S ++ EL+TG
Sbjct: 193 TNSIQTRE-YRSPEVLLGAPWGC------GADIWSTACLIFELITGD 232
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345 | Back alignment and structure |
|---|
Score = 77.7 bits (192), Expect = 2e-15
Identities = 65/234 (27%), Positives = 102/234 (43%), Gaps = 39/234 (16%)
Query: 484 GTAKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGIL----DDGREVAVKVLKRANQHGG 539
G L D F R+IG G + V L R A+KV+K+ +
Sbjct: 1 GAMDPLGLQD-------FDLLRVIGRGSYAKVL---LVRLKKTDRIYAMKVVKKELVNDD 50
Query: 540 REF---LAELEMLSR-LHHRNLVKLFGVCIEDNNR-CLVYELIHNGSLESHLHGDDKVNG 594
+ E + + +H LV L C + +R V E ++ G L H+ K+
Sbjct: 51 EDIDWVQTEKHVFEQASNHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE 109
Query: 595 PLDWDARM---KIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLART 651
AR +I+L L YLHE +I+RD K N+LL+ + K++D+G+ +
Sbjct: 110 E---HARFYSAEISLA----LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE 159
Query: 652 ALDEGNKHISTHVM-GTFGYLAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKP 703
L G+ T GT Y+APE + G S D ++ GV++ E++ GR P
Sbjct: 160 GLRPGDT---TSTFCGTPNYIAPE-ILRGEDYGFSVDWWALGVLMFEMMAGRSP 209
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345 | Back alignment and structure |
|---|
Score = 77.6 bits (192), Expect = 2e-15
Identities = 61/217 (28%), Positives = 97/217 (44%), Gaps = 32/217 (14%)
Query: 501 FHTSRIIGEGGFGVVYRGIL----DDGREVAVKVLKRANQHGGREF---LAELEMLSR-L 552
F +++G+G FG V+ L + A+K LK+ + + E +LS
Sbjct: 19 FILHKMLGKGSFGKVF---LAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 75
Query: 553 HHRNLVKLFGVCIEDNNR-CLVYELIHNGSLESHLHGDDKVNGPLDWDARM---KIALGA 608
H L +F + V E ++ G L H+ K + A +I LG
Sbjct: 76 EHPFLTHMFC-TFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLS---RATFYAAEIILG- 130
Query: 609 ARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVM-GT 667
L +LH +++RD K NILL+ D K++DFG+ + + K T+ GT
Sbjct: 131 ---LQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK---TNTFCGT 181
Query: 668 FGYLAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKP 703
Y+APE + G S D +S+GV+L E+L G+ P
Sbjct: 182 PDYIAPE-ILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382 | Back alignment and structure |
|---|
Score = 77.8 bits (192), Expect = 2e-15
Identities = 51/224 (22%), Positives = 93/224 (41%), Gaps = 35/224 (15%)
Query: 495 EKATNGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLH 553
EK + + +IG+G FG V + + VA+K++ + + + E+ +L ++
Sbjct: 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII-KNKKAFLNQAQIEVRLLELMN 108
Query: 554 HR------NLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNG--PLDWDARMKIA 605
+V L + N+ CLV+E++ +L L + + + K A
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLL----RNTNFRGVSLNLTRKFA 163
Query: 606 LGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTP--KVSDFGLARTALDEGNKHISTH 663
L +L +IH D K NILL + K+ DFG ++ G + +
Sbjct: 164 QQMCTALLFLA-TPELSIIHCDLKPENILLCNPKRSAIKIVDFG---SSCQLGQRI-YQY 218
Query: 664 VMGTFGYLAPE------YAMTGHLLVKSDVYSYGVVLLELLTGR 701
+ F Y +PE Y + D++S G +L+E+ TG
Sbjct: 219 IQSRF-YRSPEVLLGMPYDL------AIDMWSLGCILVEMHTGE 255
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299 | Back alignment and structure |
|---|
Score = 76.2 bits (188), Expect = 3e-15
Identities = 48/219 (21%), Positives = 80/219 (36%), Gaps = 61/219 (27%)
Query: 503 TSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRL-HHRNLVKL 560
TS+++G G G V + + A+K+L+ + E+E+ R ++V++
Sbjct: 22 TSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRI 76
Query: 561 FGVCIEDNNRC-----LVYELIHNGSL------ESHLHGDDKVNGPLDWDAR--MKIALG 607
V E+ +V E + G L ++ +A MK
Sbjct: 77 VDVY-ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER-------EASEIMKSIGE 128
Query: 608 AARGLAYLHEDSSPRVIHRDFKSSNILLEH---DFTPKVSDFGLARTALDEGNKHISTHV 664
A + YLH S + HRD K N+L + K++DFG A+ E
Sbjct: 129 A---IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGEK-------- 174
Query: 665 MGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
Y D++S GV++ LL G P
Sbjct: 175 ----------YDK------SCDMWSLGVIMYILLCGYPP 197
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353 | Back alignment and structure |
|---|
Score = 76.5 bits (189), Expect = 5e-15
Identities = 63/249 (25%), Positives = 107/249 (42%), Gaps = 43/249 (17%)
Query: 469 SSSSVSIDSCAVTYTGTAKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGIL----DDGR 524
++++VS G L D F+ ++G+G FG V L
Sbjct: 1 TTNTVS----KFDNNGNRDRMKLTD-------FNFLMVLGKGSFGKVM---LSERKGTDE 46
Query: 525 EVAVKVLKRANQHGGREF---LAELEMLSR-LHHRNLVKLFGVCIEDNNR-CLVYELIHN 579
AVK+LK+ + + E +L+ L +L C + +R V E ++
Sbjct: 47 LYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHS-CFQTMDRLYFVMEYVNG 105
Query: 580 GSLESHLHGDDKVNGPLDWDARM---KIALGAARGLAYLHEDSSPRVIHRDFKSSNILLE 636
G L H+ + P A +IA+G L +L +I+RD K N++L+
Sbjct: 106 GDLMYHIQQVGRFKEP---HAVFYAAEIAIG----LFFLQSK---GIIYRDLKLDNVMLD 155
Query: 637 HDFTPKVSDFGLARTALDEGNKHISTHVM-GTFGYLAPEYAMTGHLLVKS-DVYSYGVVL 694
+ K++DFG+ + + +G T GT Y+APE + KS D +++GV+L
Sbjct: 156 SEGHIKIADFGMCKENIWDGVT---TKTFCGTPDYIAPE-IIAYQPYGKSVDWWAFGVLL 211
Query: 695 LELLTGRKP 703
E+L G+ P
Sbjct: 212 YEMLAGQAP 220
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336 | Back alignment and structure |
|---|
Score = 76.1 bits (186), Expect = 6e-15
Identities = 36/202 (17%), Positives = 53/202 (26%), Gaps = 55/202 (27%)
Query: 497 ATNGFHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRAN--------QHGGREFLAELEM 548
T IGEG FG V++ I D VA+K++ Q E L E+ +
Sbjct: 18 PTEKLQRCEKIGEGVFGEVFQTI-ADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIII 76
Query: 549 LSRLH---------HRNLVKLFGVCI------------------------------EDNN 569
L + L V +D+
Sbjct: 77 SKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQ 136
Query: 570 RCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFK 629
+V E G + I LA S R HRD
Sbjct: 137 LFIVLEFEFGGIDLEQMRTK-----LSSLATAKSILHQLTASLAVAEA--SLRFEHRDLH 189
Query: 630 SSNILLEHDFTPKVSDFGLART 651
N+LL+ K+ ++
Sbjct: 190 WGNVLLKKTSLKKLHYTLNGKS 211
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674 | Back alignment and structure |
|---|
Score = 77.4 bits (190), Expect = 1e-14
Identities = 63/275 (22%), Positives = 105/275 (38%), Gaps = 27/275 (9%)
Query: 437 AFRQPEQTPHDVICAPAKLSGATTTLRYGSMLSSSSVSIDSCAVTYTGTAKTFTLNDIEK 496
F P + + G+ + G L D
Sbjct: 286 YFNVPVPPEGSEGNEELRQKFERAKIGQGTKAPEEKTANTISKFDNNGNRDRMKLTD--- 342
Query: 497 ATNGFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRANQHGGREF---LAELEMLSR- 551
F+ ++G+G FG V AVK+LK+ + + E +L+
Sbjct: 343 ----FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALP 398
Query: 552 LHHRNLVKLFGVCIEDNNR-CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAAR 610
L +L C + +R V E ++ G L H+ + P A A A
Sbjct: 399 GKPPFLTQLHS-CFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEP---HAVFYAA-EIAI 453
Query: 611 GLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVM-GTFG 669
GL +L +I+RD K N++L+ + K++DFG+ + + +G T GT
Sbjct: 454 GLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT---TKTFCGTPD 507
Query: 670 YLAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKP 703
Y+APE + KS D +++GV+L E+L G+ P
Sbjct: 508 YIAPE-IIAYQPYGKSVDWWAFGVLLYEMLAGQAP 541
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330 | Back alignment and structure |
|---|
Score = 75.1 bits (185), Expect = 1e-14
Identities = 50/221 (22%), Positives = 81/221 (36%), Gaps = 33/221 (14%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHH-RNLV 558
F + IG G FG + G L VA+K+ ++ E +L +
Sbjct: 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHL--EYRFYKQLGSGDGIP 68
Query: 559 KLFGVCIEDNNRCLVYELIHNG-SLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHE 617
+++ +V EL+ G SLE D + + IA+ + Y+H
Sbjct: 69 QVYYFGPCGKYNAMVLELL--GPSLEDLF---DLCDRTFSLKTVLMIAIQLISRMEYVHS 123
Query: 618 DSSPRVIHRDFKSSNILLEHDFTPKVS-----DFGLARTALD-EGNKHI----STHVMGT 667
+ +I+RD K N L+ DF LA+ +D E KHI + GT
Sbjct: 124 KN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGT 180
Query: 668 FGYLAPEYA-MTGHLLV----KSDVYSYGVVLLELLTGRKP 703
Y + HL + D+ + G + + L G P
Sbjct: 181 -----ARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLP 216
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396 | Back alignment and structure |
|---|
Score = 75.8 bits (187), Expect = 1e-14
Identities = 61/217 (28%), Positives = 99/217 (45%), Gaps = 32/217 (14%)
Query: 501 FHTSRIIGEGGFGVVYRGIL----DDGREVAVKVLKRANQHGGREF---LAELEMLSR-L 552
F R+IG G + V L R A++V+K+ + + E + +
Sbjct: 54 FDLLRVIGRGSYAKVL---LVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQAS 110
Query: 553 HHRNLVKLFGVCIEDNNR-CLVYELIHNGSLESHLHGDDKVNGPLDWDARM---KIALGA 608
+H LV L C + +R V E ++ G L H+ K+ AR +I+L
Sbjct: 111 NHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEE---HARFYSAEISLA- 165
Query: 609 ARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVM-GT 667
L YLHE +I+RD K N+LL+ + K++D+G+ + L G+ T GT
Sbjct: 166 ---LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---TSTFCGT 216
Query: 668 FGYLAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKP 703
Y+APE + G S D ++ GV++ E++ GR P
Sbjct: 217 PNYIAPE-ILRGEDYGFSVDWWALGVLMFEMMAGRSP 252
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296 | Back alignment and structure |
|---|
Score = 74.3 bits (183), Expect = 1e-14
Identities = 55/219 (25%), Positives = 89/219 (40%), Gaps = 31/219 (14%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHH-RNLV 558
+ R IG G FG +Y G + G EVA+K+ +H + E ++ + +
Sbjct: 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIP 68
Query: 559 KLFGVCIEDNNRCLVYELIHNG-SLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHE 617
+ E + +V EL+ G SLE + + + +A + Y+H
Sbjct: 69 TIRWCGAEGDYNVMVMELL--GPSLEDLF---NFCSRKFSLKTVLLLADQMISRIEYIH- 122
Query: 618 DSSPRVIHRDFKSSNILLEHDFTPK---VSDFGLARTALD-EGNKHI----STHVMGTFG 669
S IHRD K N L+ + DFGLA+ D ++HI + ++ GT
Sbjct: 123 --SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGT-- 178
Query: 670 YLAPEYA-MTGHLLV----KSDVYSYGVVLLELLTGRKP 703
YA + HL + + D+ S G VL+ G P
Sbjct: 179 ---ARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLP 214
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 2e-14
Identities = 63/218 (28%), Positives = 98/218 (44%), Gaps = 34/218 (15%)
Query: 501 FHTSRIIGEGGFGVVYRGIL----DDGREVAVKVLKRANQHGGREF---LAELEMLSR-L 552
FH ++IG+G FG V L + AVKVL++ +E ++E +L + +
Sbjct: 40 FHFLKVIGKGSFGKVL---LARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV 96
Query: 553 HHRNLVKLFGVCIEDNNR-CLVYELIHNGSLESHLHGDDKVNGPLDWDARM---KIALGA 608
H LV L + ++ V + I+ G L HL + P AR +IA
Sbjct: 97 KHPFLVGLHF-SFQTADKLYFVLDYINGGELFYHLQRERCFLEP---RARFYAAEIASA- 151
Query: 609 ARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVM-GT 667
L YLH + +++RD K NILL+ ++DFGL + ++ + T GT
Sbjct: 152 ---LGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNST---TSTFCGT 202
Query: 668 FGYLAPE-YAMTGHLLVKS-DVYSYGVVLLELLTGRKP 703
YLAPE + ++ D + G VL E+L G P
Sbjct: 203 PEYLAPEVLHKQPY--DRTVDWWCLGAVLYEMLYGLPP 238
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 73.8 bits (182), Expect = 4e-14
Identities = 63/218 (28%), Positives = 100/218 (45%), Gaps = 34/218 (15%)
Query: 501 FHTSRIIGEGGFGVVYRGIL----DDGREVAVKVLKRANQHGGREF---LAELEMLSR-L 552
F R++G+G FG V L + G AVKVLK+ + + E +LS
Sbjct: 25 FEFIRVLGKGSFGKVM---LARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR 81
Query: 553 HHRNLVKLFGVCIEDNNR-CLVYELIHNGSLESHLHGDDKVNGPLDWDARM---KIALGA 608
+H L +LF C + +R V E ++ G L H+ + + AR +I
Sbjct: 82 NHPFLTQLFC-CFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEA---RARFYAAEIISA- 136
Query: 609 ARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVM-GT 667
L +LH+ +I+RD K N+LL+H+ K++DFG+ + + G T GT
Sbjct: 137 ---LMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT---TATFCGT 187
Query: 668 FGYLAPE-YAMTGHLLVKS-DVYSYGVVLLELLTGRKP 703
Y+APE + + D ++ GV+L E+L G P
Sbjct: 188 PDYIAPEILQEMLY--GPAVDWWAMGVLLYEMLCGHAP 223
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298 | Back alignment and structure |
|---|
Score = 73.2 bits (180), Expect = 4e-14
Identities = 53/221 (23%), Positives = 85/221 (38%), Gaps = 33/221 (14%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHH-RNLV 558
+ R IGEG FGV++ G L + ++VA+K R + + E L +
Sbjct: 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA--PQLRDEYRTYKLLAGCTGIP 69
Query: 559 KLFGVCIEDNNRCLVYELIHNG-SLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHE 617
++ E + LV +L+ G SLE L D A + +HE
Sbjct: 70 NVYYFGQEGLHNVLVIDLL--GPSLEDLL---DLCGRKFSVKTVAMAAKQMLARVQSIHE 124
Query: 618 DSSPRVIHRDFKSSNILLEHDFTPK-----VSDFGLARTALD-EGNKHI----STHVMGT 667
S +++RD K N L+ + V DFG+ + D +HI ++ GT
Sbjct: 125 KS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGT 181
Query: 668 FGYLAPEYA-MTGHLLV----KSDVYSYGVVLLELLTGRKP 703
Y + HL + D+ + G V + L G P
Sbjct: 182 -----ARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLP 217
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429 | Back alignment and structure |
|---|
Score = 72.8 bits (179), Expect = 2e-13
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 37/214 (17%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHR------NL 557
++IG+G FG V + + VA+K++ R + R+ E+ +L L + N+
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMV-RNEKRFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 558 VKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNG--PLDWDARMKIALGAARGLAYL 615
+ + N+ C+ +EL+ +L + K N K A + L L
Sbjct: 162 IHMLENFTFRNHICMTFELLSM-NLYELI----KKNKFQGFSLPLVRKFAHSILQCLDAL 216
Query: 616 HEDSSPRVIHRDFKSSNILLEHDFTP--KVSDFGLARTALDEGNKHISTHVMGTFGYLAP 673
H R+IH D K NILL+ KV DFG + ++ + T++ F Y AP
Sbjct: 217 H---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYE----HQRVYTYIQSRF-YRAP 268
Query: 674 E------YAMTGHLLVKSDVYSYGVVLLELLTGR 701
E Y M D++S G +L ELLTG
Sbjct: 269 EVILGARYGM------PIDMWSLGCILAELLTGY 296
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364 | Back alignment and structure |
|---|
Score = 70.2 bits (172), Expect = 8e-13
Identities = 52/248 (20%), Positives = 89/248 (35%), Gaps = 49/248 (19%)
Query: 490 TLNDIEKATNGFHTSRIIGEGGFGVVYRGILDDG------REVAVKVLKRANQHGGREF- 542
+ D+ + IG+GGFG +Y ++ VKV N E
Sbjct: 28 IITDMAA--AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELK 85
Query: 543 ----LAELEMLSRLHHRNLVKLFGVC----------IEDNNRCLVYELIHNG-SLESHLH 587
A+ E + + +K GV + R ++ + G L+
Sbjct: 86 FYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF--GSDLQKIY- 142
Query: 588 GDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKV--SD 645
+ ++++L L Y+HE +H D K+SN+LL + +V D
Sbjct: 143 --EANAKRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLNYKNPDQVYLVD 197
Query: 646 FGLARTALDEG-NKHIS----THVMGTFGYLAPEYA-MTGHLLV----KSDVYSYGVVLL 695
+GLA EG +K + GT E+ + H V + D+ G ++
Sbjct: 198 YGLAYRYCPEGVHKAYAADPKRCHDGT-----IEFTSIDAHNGVAPSRRGDLEILGYCMI 252
Query: 696 ELLTGRKP 703
+ LTG P
Sbjct: 253 QWLTGHLP 260
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 69.0 bits (169), Expect = 1e-12
Identities = 54/232 (23%), Positives = 91/232 (39%), Gaps = 48/232 (20%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKL--- 560
+ IG GGFG++Y + + A V+K Q G F EL+ R+ ++ +K
Sbjct: 43 KKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFS-ELKFYQRVAKKDCIKKWIE 101
Query: 561 --------------FGVCI--EDNNRCLVYELIHNG-SLESHLHGDDKVNGPLDWDARMK 603
G+ + R +V E + G L+ NG ++
Sbjct: 102 RKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL--GIDLQKIS----GQNGTFKKSTVLQ 155
Query: 604 IALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKV--SDFGLARTALDEG-NKHI 660
+ + L Y+HE+ +H D K++N+LL + +V +D+GL+ G +K
Sbjct: 156 LGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQY 212
Query: 661 S----THVMGTFGYLAPEYA-MTGHLLV----KSDVYSYGVVLLELLTGRKP 703
GT E+ + H V +SDV G +L L G+ P
Sbjct: 213 QENPRKGHNGT-----IEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLP 259
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483 | Back alignment and structure |
|---|
Score = 68.1 bits (166), Expect = 5e-12
Identities = 58/221 (26%), Positives = 93/221 (42%), Gaps = 31/221 (14%)
Query: 499 NGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNL 557
N F R IG G FG +Y G + EVA+K+ +H + L E ++ L
Sbjct: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTG 64
Query: 558 V-KLFGVCIEDNNRCLVYELIHNG-SLESHLHGDDKVNGPLDWDARMKIALGAARGLAYL 615
+ + +E + LV +L+ G SLE + + L + +A + ++
Sbjct: 65 IPNVRWFGVEGDYNVLVMDLL--GPSLEDLF---NFCSRKLSLKTVLMLADQMINRVEFV 119
Query: 616 HEDSSPRVIHRDFKSSNILLEHDFTPK---VSDFGLARTALD-EGNKHI----STHVMGT 667
H S +HRD K N L+ + DFGLA+ D ++HI + ++ GT
Sbjct: 120 HSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGT 176
Query: 668 FGYLAPEYA-MTGHLLV----KSDVYSYGVVLLELLTGRKP 703
YA + HL + + D+ S G VL+ L G P
Sbjct: 177 -----ARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 212
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 1e-11
Identities = 54/235 (22%), Positives = 93/235 (39%), Gaps = 59/235 (25%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRL-----HHRNLV 558
R +G+G FG V +D+ + AVKV+ R + R E ++L ++ ++ N+V
Sbjct: 41 RKMGDGTFGRVLLCQHIDNKKYYAVKVV-RNIKKYTRSAKIEADILKKIQNDDINNNNIV 99
Query: 559 KLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNG--PLDWDARMKIALGAARGLAYLH 616
K G + ++ CL++E + SL + N + + + L YL
Sbjct: 100 KYHGKFMYYDHMCLIFEPLGP-SLYEII----TRNNYNGFHIEDIKLYCIEILKALNYLR 154
Query: 617 EDSSPRVIHRDFKSSNILLEHDFTP-------------------------KVSDFGLART 651
+ + H D K NILL+ + K+ DFG
Sbjct: 155 KM---SLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFG---C 208
Query: 652 ALDEGNKHISTHVMGTFGYLAPE------YAMTGHLLVKSDVYSYGVVLLELLTG 700
A + + + + + Y APE + + SD++S+G VL EL TG
Sbjct: 209 ATFK-SDYHGSIINTRQ-YRAPEVILNLGWDV------SSDMWSFGCVLAELYTG 255
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397 | Back alignment and structure |
|---|
Score = 66.5 bits (162), Expect = 1e-11
Identities = 56/265 (21%), Positives = 90/265 (33%), Gaps = 77/265 (29%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLH------ 553
+H R +G G F V+ + + VA+KV+K + +H L E+ +L +
Sbjct: 39 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVK-SAEHYTETALDEIRLLKSVRNSDPND 97
Query: 554 --HRNLVKL---FGVC-IEDNNRCLVYELIHNGSLESHLHGDDKVN--GPLDWDARMKIA 605
+V+L F + + + C+V+E+ L HL + L KI
Sbjct: 98 PNREMVVQLLDDFKISGVNGTHICMVFEV-----LGHHLLKWIIKSNYQGLPLPCVKKII 152
Query: 606 LGAARGLAYLHEDSSPRVIHRDFKSSNILLE----------------------------- 636
+GL YLH R+IH D K NILL
Sbjct: 153 QQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAV 210
Query: 637 --------------------HDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYA 676
K++D G A +KH + + T Y + E
Sbjct: 211 STAPATAGNFLVNPLEPKNAEKLKVKIADLGNACW----VHKHFTEDIQ-TRQYRSLEVL 265
Query: 677 MTGHLLVKSDVYSYGVVLLELLTGR 701
+ +D++S + EL TG
Sbjct: 266 IGSGYNTPADIWSTACMAFELATGD 290
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 3e-11
Identities = 50/231 (21%), Positives = 82/231 (35%), Gaps = 55/231 (23%)
Query: 505 RIIGEGGFGVVYRGI--LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHR------N 556
+GEG FG V + +VA+K++ R E+ +L ++ +
Sbjct: 25 GNLGEGTFGKVVECLDHARGKSQVALKII-RNVGKYREAARLEINVLKKIKEKDKENKFL 83
Query: 557 LVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNG--PLDWDARMKIALGAARGLAY 614
V + + C+ +EL+ + L K N P +A L +
Sbjct: 84 CVLMSDWFNFHGHMCIAFELLGK-NTFEFL----KENNFQPYPLPHVRHMAYQLCHALRF 138
Query: 615 LHEDSSPRVIHRDFKSSNILLEHDFTP-------------------KVSDFGLARTALDE 655
LHE ++ H D K NIL + +V+DFG +A +
Sbjct: 139 LHE---NQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG---SATFD 192
Query: 656 GNKHISTHVMGTFGYLAPE------YAMTGHLLVKSDVYSYGVVLLELLTG 700
++H +T V Y PE +A DV+S G +L E G
Sbjct: 193 -HEHHTTIVATRH-YRPPEVILELGWAQ------PCDVWSIGCILFEYYRG 235
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352 | Back alignment and structure |
|---|
Score = 62.1 bits (151), Expect = 3e-10
Identities = 48/248 (19%), Positives = 86/248 (34%), Gaps = 51/248 (20%)
Query: 491 LNDIEKATNGFHTSRIIGEGGFGVVYRGI---------LDDGREVAVKVLKRANQ--HGG 539
L D + G++Y ++ ++K+ + + +
Sbjct: 36 LTDKSG--RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQ 93
Query: 540 REFLAELEMLSRLHHRNLVKLFGVCI---------EDNNRCLVYELIHNG-SLESHLHGD 589
F + L + L + I +D R LV + G SL+S L D
Sbjct: 94 NFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL--GRSLQSAL--D 149
Query: 590 DKVNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKV--SDFG 647
L + +++A L +LHE+ +H + + NI ++ + +V + +G
Sbjct: 150 VSPKHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAENIFVDPEDQSQVTLAGYG 206
Query: 648 LARTALDEGNKHI-------STHVMGTFGYLAPEYA-MTGHLLV----KSDVYSYGVVLL 695
A G KH+ S H G E+ M H +SD+ S G +L
Sbjct: 207 FAFRYCPSG-KHVAYVEGSRSPHE-GD-----LEFISMDLHKGCGPSRRSDLQSLGYCML 259
Query: 696 ELLTGRKP 703
+ L G P
Sbjct: 260 KWLYGFLP 267
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 4e-10
Identities = 58/235 (24%), Positives = 88/235 (37%), Gaps = 63/235 (26%)
Query: 505 RIIGEGGFGVVYRGI--LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHR------N 556
+GEG FG V I GR VAVK++ + +E+++L L+
Sbjct: 20 DTLGEGAFGKVVECIDHKAGGRHVAVKIV-KNVDRYCEAARSEIQVLEHLNTTDPNSTFR 78
Query: 557 LVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNG--PLDWDARMKIALGAARGLAY 614
V++ + C+V+EL+ S + K NG P D K+A + + +
Sbjct: 79 CVQMLEWFEHHGHICIVFELLGL-STYDFI----KENGFLPFRLDHIRKMAYQICKSVNF 133
Query: 615 LHEDSSPRVIHRDFKSSNILLEHDFTP-------------------KVSDFGLARTALDE 655
LH ++ H D K NIL KV DFG +A +
Sbjct: 134 LHS---NKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG---SATYD 187
Query: 656 GNKH---IST-HVMGTFGYLAPE------YAMTGHLLVKSDVYSYGVVLLELLTG 700
H +ST H Y APE ++ DV+S G +L+E G
Sbjct: 188 DEHHSTLVSTRH------YRAPEVILALGWSQ------PCDVWSIGCILIEYYLG 230
|
| >1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733 | Back alignment and structure |
|---|
Score = 62.4 bits (151), Expect = 6e-10
Identities = 59/237 (24%), Positives = 89/237 (37%), Gaps = 13/237 (5%)
Query: 10 MALCATPSALSLRGSAVTVALPPRRLPQNLPNIQPVSPGHPPSILPDHTYSPIRSPHGSG 69
MA T + G A + P + P SPG P+ SP SP S
Sbjct: 1504 MAGGFTAYGGADYGEATSPFGAYGEAPTS-PGFGVSSPGFSPTSPTYSPTSPAYSP-TSP 1561
Query: 70 RKSHGEVLPPPNKPHHISSTKHYSPTKGAHSHDAMRPSSITPAPSSLSSFRGPTKKWV-- 127
S P P + ++ YSPT ++S + S +P+ S S PT
Sbjct: 1562 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1621
Query: 128 HGPASSPFIPFHRHHHVRNKSRNSGSGPAYPTPAPSNSQQGPSVPSFQSPLPSSSSWSSH 187
P+ SP P + + P P+ +P++ P+ PS+ P+S S+S
Sbjct: 1622 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYS---PTSPSYSPT 1678
Query: 188 APAPSPKATSGNLNLPSLRPT---ISPTSSSLKKMKTPPPSSVMTLPPPPPNEDCGS 241
+P+ SP + S + P+ PT SPTS P+ NE+ S
Sbjct: 1679 SPSYSPTSPSYSPTSPNYSPTSPSYSPTSPG---YSPGSPAYSPKQDEQKHNENENS 1732
|
| >1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733 | Back alignment and structure |
|---|
Score = 59.0 bits (142), Expect = 8e-09
Identities = 47/215 (21%), Positives = 76/215 (35%), Gaps = 9/215 (4%)
Query: 44 PVSPGHPPSILPDHTYSPIRSPHGSGRKSHGEVLPPPNKPHHISSTKHYSPTKGAHSHDA 103
P+ + + + +G G P P S+ +SPT +S +
Sbjct: 1494 PLVDSGSNDAMAGGFTAYGGADYGEATSPFGAYGEAPTSPGFGVSSPGFSPTSPTYSPTS 1553
Query: 104 MRPSSITPAPSSLSSFRGPTKKWVHGPASSPFIPFHRHHHVRNKSRNSGSGPAYPTPAPS 163
S +P+ S S PT P+ SP P + + P P+ +P+
Sbjct: 1554 PAYSPTSPSYSPTSPSYSPT-----SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1608
Query: 164 NSQQGPSVPSFQSPLPSSSSWSSHAPAPSPKATSGNLNLPSLRPTISPTSSSLKKMKTP- 222
+ P+ PS+ PS S S SP + + + P+ SPTS +
Sbjct: 1609 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSY 1668
Query: 223 -PPSSVMTLPPPPPNEDCGSVTCTEPLTYTPPGSP 256
P S + P + S + T P Y+ P SP
Sbjct: 1669 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYS-PTSP 1701
|
| >1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733 | Back alignment and structure |
|---|
Score = 47.4 bits (112), Expect = 3e-05
Identities = 44/220 (20%), Positives = 71/220 (32%), Gaps = 24/220 (10%)
Query: 38 NLPNIQPVSPGHPPSILPDHTYSPIRSPHGSGRKSHGEVLPPPNKPHHISSTKHYSPTKG 97
+ ++ P + + D +P+ + N + +SP
Sbjct: 1446 DEESLVKYMPEQKITEIED-GQDGGVTPYSNES-------GLVNADLDVKDELMFSPLVD 1497
Query: 98 AHSHDAMRPSSITPAPSSLSSFRGPTKKWVHGPASSPFIPFHRHHHVRNKSRNSGSGPAY 157
+ S+DAM + P + P S F S P +
Sbjct: 1498 SGSNDAMAGGFTAYGGADYGEATSPFGAYGEAPTSPGF---------------GVSSPGF 1542
Query: 158 PTPAPSNSQQGPSV-PSFQSPLPSSSSWSSHAPAPSPKATSGNLNLPSLRPTISPTSSSL 216
+P+ S P+ P+ S P+S S+S +P+ SP + S + PS PT S +
Sbjct: 1543 SPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1602
Query: 217 KKMKTPPPSSVMTLPPPPPNEDCGSVTCTEPLTYTPPGSP 256
PS T P P S T +P SP
Sbjct: 1603 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1642
|
| >3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe} Length = 1752 | Back alignment and structure |
|---|
Score = 60.1 bits (145), Expect = 3e-09
Identities = 60/221 (27%), Positives = 89/221 (40%), Gaps = 49/221 (22%)
Query: 40 PNIQPVSPGHPPSILPDHTYSPIRSPHGSGRKSHGEVLPPPNKPHHISSTKHYSPTKGAH 99
P+ P SP + P+ +YSP SP S P P + +++ YSPT ++
Sbjct: 1576 PSYSPTSPSYSPT---SPSYSP-TSPSYS-----------PTSPSYSATSPSYSPTSPSY 1620
Query: 100 SHDAMRPSSITPAPSSLSSFRGPTKKWVHGPASSPFIPFHRHHHVRNKSRNSGSGPAYPT 159
S + S +P+ S S PT P+ SP + P+Y
Sbjct: 1621 SPTSPSYSPTSPSYSPTSPSYSPT-----SPSYSP------------------TSPSYS- 1656
Query: 160 PAPSNSQQGPSVPSFQSPLPSSSSWSSHAPAPSPKATSGNLNLPSLRPTISPTSSSLKKM 219
P++ P+ PS+ P+S S+S +P+ SP + S + PS PT SP+ S
Sbjct: 1657 --PTSPSYSPTSPSYS---PTSPSYSPTSPSYSPTSPSYSPTSPSYSPT-SPSYSPTSPS 1710
Query: 220 KTPP-PSSVMTLPPPPPNEDCGSVTCTEPLTYTP---PGSP 256
+P PS T P P S T +P P SP
Sbjct: 1711 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1751
|
| >3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe} Length = 1752 | Back alignment and structure |
|---|
Score = 53.5 bits (128), Expect = 3e-07
Identities = 52/244 (21%), Positives = 85/244 (34%), Gaps = 47/244 (19%)
Query: 14 ATPSALSLRGSAVTVALPPRRLPQNLPNIQPVSPGHPPSILPDHTYSPIRSPHGSGRKSH 73
L S P + P PS YSP SP S ++
Sbjct: 1519 FGDYGLLGAASPYKGVQSPGYTSPFSSAMSPGYGLTSPS------YSP-SSPGYSTSPAY 1571
Query: 74 GEVLPPPNKPHHISSTKHYSPTKGAHSHDAMRPSSITPAPSSLSSFRGPTKKWVHGPASS 133
P+ P + ++ YSPT ++S P+S + +P+S P+ S
Sbjct: 1572 M-----PSSPSYSPTSPSYSPTSPSYS-----PTSPSYSPTS--------------PSYS 1607
Query: 134 PFIPFHRHHHVRNKSRNSGSGPAYPTPAPSNSQQGPSVPSFQSPLPSSSSWSSHAPAP-S 192
P + P P+ +P++ P+ PS+ SP S S +S + +P S
Sbjct: 1608 ATSPSY--------------SPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSPSYSPTS 1652
Query: 193 PKATSGNLNLPSLRPTISPTSSSLKKMKTPPPSSVMTLPPPPPNEDCGSVTCTEPLTYTP 252
P + + + P+ SPTS S + + P P+ S + +
Sbjct: 1653 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1712
Query: 253 PGSP 256
P SP
Sbjct: 1713 PTSP 1716
|
| >3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe} Length = 1752 | Back alignment and structure |
|---|
Score = 50.8 bits (121), Expect = 2e-06
Identities = 42/158 (26%), Positives = 66/158 (41%), Gaps = 23/158 (14%)
Query: 40 PNIQPVSPGHPPSILPDHTYSPIRSPHGSGRKSHGEVLPPPNKPHHISSTKHYSPTKGAH 99
P+ P SP + P+ SP SP S S P P + ++ YSPT ++
Sbjct: 1618 PSYSPTSPSYSPT-------SPSYSP-TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1669
Query: 100 SHDAMRPSSITPAPSSLSSFRGPTKKWVHGPASSPFIPFHRHHHVRNKSRNSGSGPAYPT 159
S + S +P+ S S PT + P S + P S + P+Y
Sbjct: 1670 SPTSPSYSPTSPSYSPTSPSYSPTSP-SYSPTSPSYSP--------TSPSYSPTSPSYS- 1719
Query: 160 PAPSNSQQGPSVPSFQSPLPSSSSWSSHAPAPSPKATS 197
P++ P+ PS+ P+S S+S +P+ SP + S
Sbjct: 1720 --PTSPSYSPTSPSYS---PTSPSYSPTSPSYSPTSPS 1752
|
| >3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe} Length = 1752 | Back alignment and structure |
|---|
Score = 48.1 bits (114), Expect = 1e-05
Identities = 54/225 (24%), Positives = 73/225 (32%), Gaps = 27/225 (12%)
Query: 37 QNLPNIQPVSPGHPPSILPDHTYSPIRSPHGSGRKSHGEVLPPPNKPHHISSTKHYSPTK 96
+ + S G L + P G+G P + S P
Sbjct: 1451 LDQDMLMNYSLGTAVPTLAGSGMGTSQLPEGAGTPYER---SPMVDSGFVGS-----PDA 1502
Query: 97 GAHS--HDAMRPSSITPAPSSLSSFRGPTKKWVHGPASSPFIPFHRHHHVRNKSRNSGSG 154
A S L P K +SPF + S S
Sbjct: 1503 AAFSPLVQGGSEGREGFGDYGLLGAASPYKGVQSPGYTSPFSSAMSPGYGLTSPSYSPSS 1562
Query: 155 PAY---PTPAPSNSQQGPSVPSFQSPLPSSSSWSSHAPAPSPKATSGNLNLPSLRPTISP 211
P Y P PS+ P+ PS+ P+S S+S +P+ SP TS + + S P+ SP
Sbjct: 1563 PGYSTSPAYMPSSPSYSPTSPSYS---PTSPSYSPTSPSYSP--TSPSYSATS--PSYSP 1615
Query: 212 TSSSLKKMKTPPPSSVMTLPPPPPNEDCGSVTCTEPLTYTPPGSP 256
TS S PS T P P S T +Y+ P SP
Sbjct: 1616 TSPS---YSPTSPSYSPTSPSYSPTSPSYSPT---SPSYS-PTSP 1653
|
| >3dzy_A Retinoic acid receptor RXR-alpha; DNA-binding, HOST-virus interaction, metal-binding, nucleus, receptor, transcription, transcription regulation, zinc-FIN activator; HET: DNA REA BRL; 3.10A {Homo sapiens} PDB: 3dzu_A* 3e00_A* Length = 467 | Back alignment and structure |
|---|
Score = 45.9 bits (108), Expect = 5e-05
Identities = 17/123 (13%), Positives = 35/123 (28%), Gaps = 1/123 (0%)
Query: 136 IPFHRHHHVRNKSRNSGSGPAYPTPAPSNSQQGPSVPSFQSPLPSSSSWSSHAPAPSPKA 195
+ H HHHV + + + +P+ + + PS L +P
Sbjct: 1 MAHHHHHHVDDDDKMFSTQVNSSLTSPT-GRGSMAAPSLHPSLGPGIGSPGQLHSPISTL 59
Query: 196 TSGNLNLPSLRPTISPTSSSLKKMKTPPPSSVMTLPPPPPNEDCGSVTCTEPLTYTPPGS 255
+S + IS P+ + P + V+ +E + +
Sbjct: 60 SSPINGMGPPFSVISSPMGPHSMSVPTTPTLGFSTGSPQLSSPMNPVSSSEDIKPPLGLN 119
Query: 256 PCG 258
Sbjct: 120 GVL 122
|
| >3dzy_A Retinoic acid receptor RXR-alpha; DNA-binding, HOST-virus interaction, metal-binding, nucleus, receptor, transcription, transcription regulation, zinc-FIN activator; HET: DNA REA BRL; 3.10A {Homo sapiens} PDB: 3dzu_A* 3e00_A* Length = 467 | Back alignment and structure |
|---|
Score = 41.6 bits (97), Expect = 9e-04
Identities = 22/151 (14%), Positives = 37/151 (24%), Gaps = 17/151 (11%)
Query: 91 HYSPTKGAHSHDAMRPSSITPAPSSLSSFRGPTKKWVHGPASSPFIPFHRHHHVRNKSRN 150
H+ + + +S +P+ S P+ P+ P I H
Sbjct: 5 HHHHVDDDDKMFSTQVNSSLTSPTGRGSMAAPS----LHPSLGPGIGSPGQLH------- 53
Query: 151 SGSGPAYPTPAPSNSQQGPSVPSFQSPLPSSSSWSSHAPAPSPKATSGNLNLPSLRPTIS 210
T + + GP SP+ S P S L+ P + S
Sbjct: 54 ----SPISTLSSPINGMGPPFSVISSPMGPHSMSVPTTPTLGFSTGSPQLSSPMNPVSSS 109
Query: 211 PTSSSLKKMKTPP--PSSVMTLPPPPPNEDC 239
+ P+ C
Sbjct: 110 EDIKPPLGLNGVLKVPAHPSGNMASFTKHIC 140
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* Length = 263 | Back alignment and structure |
|---|
Score = 44.3 bits (104), Expect = 8e-05
Identities = 25/195 (12%), Positives = 47/195 (24%), Gaps = 50/195 (25%)
Query: 507 IGEGGFG-VVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLV-KLFGVC 564
EG VY+ ++ + + +K+ + + E +M+ L + V K+
Sbjct: 21 DTEGMSPAKVYK-LVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFE 79
Query: 565 IEDNNRCLVYELIHNGSLES--------------------HLHGDDKVNGPLDWDARMKI 604
D L+ H D + P ++
Sbjct: 80 RHDGWSNLLMSEADGVLCSEEYEDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRL 139
Query: 605 ALGAARGLAYLHE---------------------------DSSPRVIHRDFKSSNILLEH 637
A L + + H D SNI ++
Sbjct: 140 AELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKD 199
Query: 638 DFTPKVSDFGLARTA 652
D G + A
Sbjct: 200 GKVSGFIDLGRSGRA 214
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* Length = 282 | Back alignment and structure |
|---|
Score = 43.0 bits (101), Expect = 2e-04
Identities = 35/232 (15%), Positives = 65/232 (28%), Gaps = 45/232 (19%)
Query: 442 EQTPHDVICAPAKLSGATTTLRYGSMLSSSSVSIDSCAVTYTGTAKTF---TLNDIEKAT 498
E P +I + A++ + V Y G+ TF +L + +
Sbjct: 29 EYVPLQLISSHARIGEEKARNILKYLSDLRVVQNRQ--KDYEGSTFTFIGLSLYSLHRLV 86
Query: 499 NGFHTSRIIGEGGFG---VVYRGILDDGREVAVKV--------LKRANQHGGREF----- 542
I G G V+ + E VK K + +
Sbjct: 87 RSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVL 146
Query: 543 -----LAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLD 597
E L +L + K++ ++ ELI L + +
Sbjct: 147 AIRSARNEFRALQKLQGLAVPKVYAW----EGNAVLMELIDAKELYRVRVENPD---EVL 199
Query: 598 WDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLA 649
++A RG+ +H D N+L+ + + DF +
Sbjct: 200 DMILEEVAKFYHRGI-----------VHGDLSQYNVLV-SEEGIWIIDFPQS 239
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 897 | ||||
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 1e-73 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 1e-69 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 1e-68 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 2e-68 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 2e-67 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 3e-67 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 1e-66 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 3e-65 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 1e-64 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 1e-64 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 9e-64 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 3e-63 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 3e-63 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 5e-63 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 9e-63 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 6e-62 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 1e-61 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 1e-61 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 1e-61 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 2e-61 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 4e-61 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 1e-60 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 3e-60 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 6e-60 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 2e-59 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 4e-58 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 6e-58 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 1e-56 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 1e-56 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 3e-55 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 4e-54 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 1e-53 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 2e-53 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 1e-52 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 3e-52 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 2e-50 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 2e-50 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 7e-50 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 1e-48 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 7e-48 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 2e-47 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 2e-46 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 3e-46 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 6e-46 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 9e-46 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 1e-45 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 7e-45 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 2e-44 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 3e-44 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 6e-44 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 5e-43 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 1e-42 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 6e-42 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 2e-41 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 9e-41 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 5e-40 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 7e-39 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 7e-36 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 9e-36 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 1e-35 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 9e-35 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 1e-30 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 9e-28 |
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 241 bits (615), Expect = 1e-73
Identities = 73/276 (26%), Positives = 118/276 (42%), Gaps = 26/276 (9%)
Query: 505 RIIGEGGFGVVYRGILDDGREVAVKVLK--RANQHGGREFLAELEMLSRLHHRNLVKLFG 562
+ IG G FG VY+G +VAVK+L + F E+ +L + H N++ G
Sbjct: 14 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 563 VCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPR 622
+V + SL HLH + + + IA A+G+ YLH
Sbjct: 72 YS-TAPQLAIVTQWCEGSSLYHHLH---IIETKFEMIKLIDIARQTAQGMDYLHA---KS 124
Query: 623 VIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMT---G 679
+IHRD KS+NI L D T K+ DFGLA H + G+ ++APE
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 680 HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIES 739
+SDVY++G+VL EL+TG+ P Q + G + + S
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV--------GRGYLSPDLSKVRS 236
Query: 740 NISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775
N + + + C++ + RP +++ +++
Sbjct: 237 NCPKA----MKRLMAECLKKKRDERPLFPQILASIE 268
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 229 bits (586), Expect = 1e-69
Identities = 67/275 (24%), Positives = 120/275 (43%), Gaps = 24/275 (8%)
Query: 501 FHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKL 560
+G G FG V+ G + +VAVK LK+ + FLAE ++ +L H+ LV+L
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRL 73
Query: 561 FGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSS 620
+ V ++ ++ E + NGSL L + L + + +A A G+A++
Sbjct: 74 YAVVTQEP-IYIITEYMENGSLVDFLKTPSGI--KLTINKLLDMAAQIAEGMAFIE---E 127
Query: 621 PRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGH 680
IHRD +++NIL+ + K++DFGLAR +++ + APE G
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARL-IEDNEYTAREGAKFPIKWTAPEAINYGT 186
Query: 681 LLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESN 740
+KSDV+S+G++L E++T + + + L+ V N
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE------------VIQNLERGYRMVRPDN 234
Query: 741 ISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775
+ + + +C + RP + L+
Sbjct: 235 CPEE----LYQLMRLCWKERPEDRPTFDYLRSVLE 265
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 229 bits (584), Expect = 1e-68
Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 12/214 (5%)
Query: 494 IEKATNGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGRE-FLAELEMLSR 551
+E + F +G G GVV++ G +A K++ + R + EL++L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 552 LHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARG 611
+ +V +G D + E + GSL+ L G + K+++ +G
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKG 116
Query: 612 LAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYL 671
L YL +++HRD K SNIL+ K+ DFG++ +D ++ +GT Y+
Sbjct: 117 LTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYM 170
Query: 672 APEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 705
+PE H V+SD++S G+ L+E+ GR P+
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP 204
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 226 bits (576), Expect = 2e-68
Identities = 71/275 (25%), Positives = 119/275 (43%), Gaps = 24/275 (8%)
Query: 501 FHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKL 560
+ IG G FG+V+ G + +VA+K ++ +F+ E E++ +L H LV+L
Sbjct: 7 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQL 65
Query: 561 FGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSS 620
+GVC+E CLV+E + +G L +L + + + + L G+AYL E
Sbjct: 66 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLF---AAETLLGMCLDVCEGMAYLEE--- 119
Query: 621 PRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGH 680
VIHRD + N L+ + KVSDFG+ R + + ST + +PE
Sbjct: 120 ACVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSR 178
Query: 681 LLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESN 740
KSDV+S+GV++ E+ + K ++ + E + T
Sbjct: 179 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE------------VVEDISTGFRLYKPRL 226
Query: 741 ISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775
S V I + C + RP +++ L
Sbjct: 227 ASTH----VYQIMNHCWKERPEDRPAFSRLLRQLA 257
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 225 bits (573), Expect = 2e-67
Identities = 78/305 (25%), Positives = 122/305 (40%), Gaps = 39/305 (12%)
Query: 488 TFTLNDIEKATNGFHTS---------RIIGEGGFGVVYRGIL----DDGREVAVKVLKRA 534
FT D +A F ++IG G FG V G L VA+K LK
Sbjct: 6 PFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSG 65
Query: 535 NQHGG-REFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVN 593
R+FL+E ++ + H N++ L GV + ++ E + NGSL+S L + +
Sbjct: 66 YTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQN---D 122
Query: 594 GPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTAL 653
G + + G A G+ YL + +HRD + NIL+ + KVSDFGL+R
Sbjct: 123 GQFTVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 179
Query: 654 DEGNKHISTHV---MGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPP 710
D+ + T + APE SDV+SYG+V+ E+++ + P
Sbjct: 180 DDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGER-----PY 234
Query: 711 GQENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEV 770
I+ D + + C Q + +HRP G++
Sbjct: 235 WDMTNQDVIN-----------AIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQI 283
Query: 771 VQALK 775
V L
Sbjct: 284 VNTLD 288
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 222 bits (567), Expect = 3e-67
Identities = 64/276 (23%), Positives = 111/276 (40%), Gaps = 26/276 (9%)
Query: 501 FHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKL 560
+ +G G FGVV G +VA+K++K + EF+ E +++ L H LV+L
Sbjct: 6 LTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQL 64
Query: 561 FGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSS 620
+GVC + ++ E + NG L ++L +++ + YL
Sbjct: 65 YGVCTKQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLES--- 118
Query: 621 PRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGH 680
+ +HRD + N L+ KVSDFGL+R + + S + PE M
Sbjct: 119 KQFLHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLMYSK 177
Query: 681 LLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIES 739
KSD++++GV++ E+ + G+ P + +A L P + S
Sbjct: 178 FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRL----------YRPHLAS 227
Query: 740 NISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775
KV I C + RP ++ +
Sbjct: 228 E-------KVYTIMYSCWHEKADERPTFKILLSNIL 256
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 222 bits (567), Expect = 1e-66
Identities = 74/293 (25%), Positives = 119/293 (40%), Gaps = 30/293 (10%)
Query: 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGVC 564
IG+G FG V+RG G EVAVK+ + AE+ L H N++
Sbjct: 9 ESIGKGRFGEVWRGKWR-GEEVAVKIFSS-REERSWFREAEIYQTVMLRHENILGFIAAD 66
Query: 565 IEDNNR----CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHED-- 618
+DN LV + +GSL +L+ + + +K+AL A GLA+LH +
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLHMEIV 121
Query: 619 ---SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGN--KHISTHVMGTFGYLAP 673
P + HRD KS NIL++ + T ++D GLA + H +GT Y+AP
Sbjct: 122 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 181
Query: 674 EYAMTGHLL------VKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKE 727
E + ++D+Y+ G+V E+ + Q + +E
Sbjct: 182 EVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH-EDYQLPYYDLVPSDPSVEE 240
Query: 728 GLKTIIDPVIESNI-----SYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775
K + + + NI S + L +A I C + R + + L
Sbjct: 241 MRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 293
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 217 bits (554), Expect = 3e-65
Identities = 73/276 (26%), Positives = 116/276 (42%), Gaps = 30/276 (10%)
Query: 501 FHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKL 560
+ IG+G FG V G G +VAVK +K N + FLAE ++++L H NLV+L
Sbjct: 9 LKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQL 65
Query: 561 FGVCIEDNNR-CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDS 619
GV +E+ +V E + GSL +L + L D +K +L + YL
Sbjct: 66 LGVIVEEKGGLYIVTEYMAKGSLVDYLR--SRGRSVLGGDCLLKFSLDVCEAMEYLE--- 120
Query: 620 SPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTG 679
+HRD + N+L+ D KVSDFGL + A + APE
Sbjct: 121 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA-----SSTQDTGKLPVKWTAPEALREK 175
Query: 680 HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIES 739
KSDV+S+G++L E+ + + P + L + ++G K
Sbjct: 176 KFSTKSDVWSFGILLWEIYSFGRV-----PYPRIPLKDVVPRV---EKGYK----MDAPD 223
Query: 740 NISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775
V + C + + RP ++ + L+
Sbjct: 224 GCPPA----VYEVMKNCWHLDAAMRPSFLQLREQLE 255
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 218 bits (555), Expect = 1e-64
Identities = 76/288 (26%), Positives = 119/288 (41%), Gaps = 30/288 (10%)
Query: 502 HTSRIIGEGGFGVVYRGILDD----GREVAVKVLKRANQHGG-REFLAELEMLSRLHHRN 556
H + +IG G FG VY G L D AVK L R G +FL E ++ H N
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 89
Query: 557 LVKLFGVCIE-DNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYL 615
++ L G+C+ + + +V + +G L + + + + L A+G+ +L
Sbjct: 90 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKFL 146
Query: 616 HEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNK--HISTHVMGTFGYLAP 673
+ +HRD + N +L+ FT KV+DFGLAR D+ H T ++A
Sbjct: 147 AS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 203
Query: 674 EYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTII 733
E T KSDV+S+GV+L EL+T P P N LL +
Sbjct: 204 ESLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRR------ 252
Query: 734 DPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNEF 781
+ + + C P+ RP E+V + + + F
Sbjct: 253 -LLQPEYCPDP----LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 295
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 217 bits (554), Expect = 1e-64
Identities = 73/293 (24%), Positives = 114/293 (38%), Gaps = 40/293 (13%)
Query: 505 RIIGEGGFGVVYRGIL------DDGREVAVKVLKRANQHGGRE-FLAELEMLSRL-HHRN 556
+ +G G FG V D VAVK+LK + RE ++EL++LS L +H N
Sbjct: 29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 88
Query: 557 LVKLFGVCIEDNNRCLVYELIHNGSLESHLHG--------------DDKVNGPLDWDARM 602
+V L G C ++ E G L + L + LD + +
Sbjct: 89 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 148
Query: 603 KIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIST 662
+ A+G+A+L S IHRD + NILL H K+ DFGLAR ++ N +
Sbjct: 149 SFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 205
Query: 663 HVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPL 722
+ ++APE +SDV+SYG+ L EL + P +
Sbjct: 206 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK--------- 256
Query: 723 LTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775
+I ++ I C + RP ++VQ ++
Sbjct: 257 ------FYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 303
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 215 bits (547), Expect = 9e-64
Identities = 71/315 (22%), Positives = 120/315 (38%), Gaps = 46/315 (14%)
Query: 491 LNDIEKATNGFHTSRIIGEGGFGVVYRGIL------DDGREVAVKVLKRANQHGGR-EFL 543
L +E N R IGEG FG V++ + VAVK+LK + +F
Sbjct: 5 LLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQ 64
Query: 544 AELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDK------------ 591
E +++ + N+VKL GVC CL++E + G L L
Sbjct: 65 REAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLS 124
Query: 592 --------VNGPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKV 643
PL ++ IA A G+AYL + +HRD + N L+ + K+
Sbjct: 125 TRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKI 181
Query: 644 SDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
+DFGL+R + ++ PE +SDV++YGVVL E+ +
Sbjct: 182 ADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQ 241
Query: 704 VDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSH 763
+E + + D I + + +++ + +C +
Sbjct: 242 PYYGMAH---------------EEVIYYVRDGNILA-CPENCPLELYNLMRLCWSKLPAD 285
Query: 764 RPFMGEVVQALKLVC 778
RP + + L+ +C
Sbjct: 286 RPSFCSIHRILQRMC 300
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 212 bits (541), Expect = 3e-63
Identities = 62/279 (22%), Positives = 107/279 (38%), Gaps = 26/279 (9%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGG--REFLAELEMLSRLHHRNL 557
+ IG G +G + DG+ + K L + + ++E+ +L L H N+
Sbjct: 6 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 65
Query: 558 VKLFGVCIEDNNR--CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYL 615
V+ + I+ N +V E G L S + K LD + +++ L
Sbjct: 66 VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC 125
Query: 616 HE--DSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAP 673
H D V+HRD K +N+ L+ K+ DFGLAR + + +GT Y++P
Sbjct: 126 HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTSFAKAFVGTPYYMSP 183
Query: 674 EYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTII 733
E KSD++S G +L EL P + +
Sbjct: 184 EQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKF------------ 231
Query: 734 DPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772
I S + + I + + + HRP + E+++
Sbjct: 232 -RRIPYRYSDE----LNEIITRMLNLKDYHRPSVEEILE 265
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 213 bits (542), Expect = 3e-63
Identities = 69/287 (24%), Positives = 110/287 (38%), Gaps = 24/287 (8%)
Query: 501 FHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVK 559
+G G +G VY G+ VAVK LK EFL E ++ + H NLV+
Sbjct: 19 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQ 77
Query: 560 LFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDS 619
L GVC + ++ E + G+L +L + + + +A + + YL
Sbjct: 78 LLGVCTREPPFYIITEFMTYGNLLDYLR--ECNRQEVSAVVLLYMATQISSAMEYLE--- 132
Query: 620 SPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTG 679
IHRD + N L+ + KV+DFGL+R + + APE
Sbjct: 133 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYN 191
Query: 680 HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIES 739
+KSDV+++GV+L E+ T Q + +++
Sbjct: 192 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----------------VYELLEKDYRM 235
Query: 740 NISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNEFDETKE 786
KV + C Q S RP E+ QA + + E + E
Sbjct: 236 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE 282
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 212 bits (540), Expect = 5e-63
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 29/288 (10%)
Query: 495 EKATNGFHTSRIIGEGGFGVVYRGILDDG-----REVAVKVLKRANQHGGR-EFLAELEM 548
E + ++IG G FG VY+G+L VA+K LK R +FL E +
Sbjct: 3 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGI 62
Query: 549 LSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGA 608
+ + H N+++L GV + ++ E + NG+L+ L + +G + + G
Sbjct: 63 MGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLR---EKDGEFSVLQLVGMLRGI 119
Query: 609 ARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNK-HISTHVMGT 667
A G+ YL + +HRD + NIL+ + KVSDFGL+R D+ + ++
Sbjct: 120 AAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIP 176
Query: 668 FGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKE 727
+ APE SDV+S+G+V+ E++T + +
Sbjct: 177 IRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE--------------- 221
Query: 728 GLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775
+ I+ D + + C Q E + RP ++V L
Sbjct: 222 -VMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILD 268
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 213 bits (542), Expect = 9e-63
Identities = 67/302 (22%), Positives = 117/302 (38%), Gaps = 45/302 (14%)
Query: 501 FHTSRIIGEGGFGVVYRGIL------DDGREVAVKVLKRANQHGGRE-FLAELEMLSRL- 552
+++G G FG V +VAVK+LK RE ++EL+M+++L
Sbjct: 39 LEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLG 98
Query: 553 HHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHG-------------------DDKVN 593
H N+V L G C L++E G L ++L +++
Sbjct: 99 SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 158
Query: 594 GPLDWDARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTAL 653
L ++ + A A+G+ +L +HRD + N+L+ H K+ DFGLAR +
Sbjct: 159 NVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIM 215
Query: 654 DEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQE 713
+ N + + ++APE G +KSDV+SYG++L E+ + P
Sbjct: 216 SDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN 275
Query: 714 NLVAWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQA 773
+I + + + ++ I C + RP +
Sbjct: 276 ---------------FYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF 320
Query: 774 LK 775
L
Sbjct: 321 LG 322
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 209 bits (533), Expect = 6e-62
Identities = 67/275 (24%), Positives = 113/275 (41%), Gaps = 30/275 (10%)
Query: 507 IGEGGFGVVYRGIL---DDGREVAVKVLKRANQHGGRE-FLAELEMLSRLHHRNLVKLFG 562
+G G FG V +G+ +VA+KVLK+ + E + E +++ +L + +V+L G
Sbjct: 17 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 76
Query: 563 VCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPR 622
VC + LV E+ G L L G + ++ + G+ YL E
Sbjct: 77 VC-QAEALMLVMEMAGGGPLHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEE---KN 129
Query: 623 VIHRDFKSSNILLEHDFTPKVSDFGLAR-TALDEGNKHISTHVMGTFGYLAPEYAMTGHL 681
+HRD + N+LL + K+SDFGL++ D+ + + APE
Sbjct: 130 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 189
Query: 682 LVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESN 740
+SDV+SYGV + E L+ G+KP + P + +
Sbjct: 190 SSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKR-------------MECPPE 236
Query: 741 ISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775
+ + A+ S C + RP V Q ++
Sbjct: 237 CPPE----LYALMSDCWIYKWEDRPDFLTVEQRMR 267
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 208 bits (530), Expect = 1e-61
Identities = 67/278 (24%), Positives = 116/278 (41%), Gaps = 32/278 (11%)
Query: 505 RIIGEGGFGVVYRGILDD---GREVAVKVLKRANQHGG--REFLAELEMLSRLHHRNLVK 559
+ +G G FG V +G + VAVK+LK E LAE ++ +L + +V+
Sbjct: 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 72
Query: 560 LFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDS 619
+ G+C E + LV E+ G L +L N + +++ + G+ YL E
Sbjct: 73 MIGIC-EAESWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEE-- 125
Query: 620 SPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH-ISTHVMGTFGYLAPEYAMT 678
+HRD + N+LL K+SDFGL++ + N + TH + APE
Sbjct: 126 -SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 184
Query: 679 GHLLVKSDVYSYGVVLLELLT-GRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVI 737
KSDV+S+GV++ E + G+KP + ++
Sbjct: 185 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER-------------MGC 231
Query: 738 ESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775
+ + + + ++C +V +RP V L+
Sbjct: 232 PAGCPRE----MYDLMNLCWTYDVENRPGFAAVELRLR 265
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 208 bits (530), Expect = 1e-61
Identities = 67/275 (24%), Positives = 114/275 (41%), Gaps = 24/275 (8%)
Query: 501 FHTSRIIGEGGFGVVYRGILDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKL 560
+G+G FG V+ G + VA+K LK FL E +++ +L H LV+L
Sbjct: 19 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQL 77
Query: 561 FGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSS 620
+ V + +V E + GSL L G+ L + +A A G+AY+
Sbjct: 78 YAVV-SEEPIYIVTEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVER--- 131
Query: 621 PRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGH 680
+HRD +++NIL+ + KV+DFGLAR +++ + APE A+ G
Sbjct: 132 MNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGR 190
Query: 681 LLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESN 740
+KSDV+S+G++L EL T + + + ++
Sbjct: 191 FTIKSDVWSFGILLTELTTKGRVPYPGMVNRE----------------VLDQVERGYRMP 234
Query: 741 ISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775
+ + + C + E RP + L+
Sbjct: 235 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 269
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 209 bits (532), Expect = 1e-61
Identities = 71/296 (23%), Positives = 116/296 (39%), Gaps = 41/296 (13%)
Query: 485 TAKTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGG---R 540
A+ F +D EK F R IG G FG VY + + VA+K + + + +
Sbjct: 4 VAELFFKDDPEKL---FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQ 60
Query: 541 EFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDA 600
+ + E+ L +L H N ++ G + ++ LV E + + PL
Sbjct: 61 DIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVH----KKPLQEVE 116
Query: 601 RMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHI 660
+ GA +GLAYLH S +IHRD K+ NILL K+ DFG A
Sbjct: 117 IAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM------AP 167
Query: 661 STHVMGTFGYLAPEYAMT---GHLLVKSDVYSYGVVLLELLTGRKP-VDLSQPPGQENLV 716
+ +GT ++APE + G K DV+S G+ +EL + P +++ ++
Sbjct: 168 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA 227
Query: 717 AWARPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772
P + + S C+Q RP +++
Sbjct: 228 QNESP-------------ALQSGHWSEY----FRNFVDSCLQKIPQDRPTSEVLLK 266
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 206 bits (526), Expect = 2e-61
Identities = 69/290 (23%), Positives = 111/290 (38%), Gaps = 40/290 (13%)
Query: 487 KTFTLNDIEKATNGFHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRA---NQHGGREF 542
+ + L D F R +G+G FG VY +A+KVL +A +
Sbjct: 1 RQWALED-------FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 53
Query: 543 LAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARM 602
E+E+ S L H N+++L+G + L+ E G++ L D
Sbjct: 54 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTA 109
Query: 603 KIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIST 662
A L+Y H S RVIHRD K N+LL K++DFG + T
Sbjct: 110 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRT 162
Query: 663 HVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPL 722
+ GT YL PE K D++S GV+ E L G+ P + + ++
Sbjct: 163 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR---- 218
Query: 723 LTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772
++ ++ + S ++ S RP + EV++
Sbjct: 219 ----------VEFTFPDFVTEG----ARDLISRLLKHNPSQRPMLREVLE 254
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 207 bits (527), Expect = 4e-61
Identities = 62/274 (22%), Positives = 112/274 (40%), Gaps = 29/274 (10%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGV 563
+G+G FG VY+ + A KV+ ++ +++ E+++L+ H N+VKL
Sbjct: 18 GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 77
Query: 564 CIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRV 623
+NN ++ E G++++ + ++ PL + L YLH ++
Sbjct: 78 FYYENNLWILIEFCAGGAVDAVML---ELERPLTESQIQVVCKQTLDALNYLH---DNKI 131
Query: 624 IHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLL- 682
IHRD K+ NIL D K++DFG++ + +GT ++APE M
Sbjct: 132 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRR--DSFIGTPYWMAPEVVMCETSKD 189
Query: 683 ----VKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIE 738
K+DV+S G+ L+E+ P P +A + P
Sbjct: 190 RPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPP-----------TLAQP 238
Query: 739 SNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772
S S + C++ V R +++Q
Sbjct: 239 SRWSSN----FKDFLKKCLEKNVDARWTTSQLLQ 268
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 205 bits (522), Expect = 1e-60
Identities = 65/276 (23%), Positives = 110/276 (39%), Gaps = 33/276 (11%)
Query: 505 RIIGEGGFGVVYRGIL-DDGREVAVKVLK--RANQHGGREFLAELEMLSRLHHRNLVKLF 561
IG G F VY+G+ + EVA L+ + + + F E EML L H N+V+ +
Sbjct: 15 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFY 74
Query: 562 GVCIE----DNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHE 617
LV EL+ +G+L+++L + +GL +LH
Sbjct: 75 DSWESTVKGKKCIVLVTELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLHT 130
Query: 618 DSSPRVIHRDFKSSNILL-EHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYA 676
+ P +IHRD K NI + + K+ D GLA + V+GT ++APE
Sbjct: 131 RT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLAT----LKRASFAKAVIGTPEFMAPEM- 184
Query: 677 MTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPV 736
DVY++G+ +LE+ T P Q Q + + V
Sbjct: 185 YEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQI---------------YRRVTSGV 229
Query: 737 IESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772
++ + +V I C++ R + +++
Sbjct: 230 KPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 265
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 205 bits (522), Expect = 3e-60
Identities = 75/315 (23%), Positives = 120/315 (38%), Gaps = 43/315 (13%)
Query: 499 NGFHTSRIIGEGGFGVVYRGILDDG---REVAVKVLKR-ANQHGGREFLAELEMLSRL-H 553
N +IGEG FG V + + + A+K +K A++ R+F ELE+L +L H
Sbjct: 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 69
Query: 554 HRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHG------------DDKVNGPLDWDAR 601
H N++ L G C L E +G+L L + L
Sbjct: 70 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 129
Query: 602 MKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIS 661
+ A ARG+ YL + IHRD + NIL+ ++ K++DFGL+R +
Sbjct: 130 LHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKK 183
Query: 662 THVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARP 721
T ++A E SDV+SYGV+L E+++ P
Sbjct: 184 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT-----PYCGMTCAELYEK 238
Query: 722 LLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNEF 781
L N + V + C + + RP +++ +L N
Sbjct: 239 LPQGY-------RLEKPLNCDDE----VYDLMRQCWREKPYERPSFAQILVSL----NRM 283
Query: 782 DETKETIESRDLSED 796
E ++T + L E
Sbjct: 284 LEERKTYVNTTLYEK 298
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 203 bits (517), Expect = 6e-60
Identities = 63/275 (22%), Positives = 99/275 (36%), Gaps = 25/275 (9%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGRE-FLAELEMLSRLHHRNLV 558
+ + +GEG +G V + VAVK++ E E+ + L+H N+V
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 66
Query: 559 KLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHED 618
K +G E N + L E G L + + + + G+ YLH
Sbjct: 67 KFYGHRREGNIQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYLH-- 120
Query: 619 SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMT 678
+ HRD K N+LL+ K+SDFGLA + + + GT Y+APE
Sbjct: 121 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 179
Query: 679 GHLL-VKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVI 737
DV+S G+VL +L G P D QE +
Sbjct: 180 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE---------------YSDWKEKKT 224
Query: 738 ESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772
N A+ + S R + ++ +
Sbjct: 225 YLNPWKKIDSAPLALLHKILVENPSARITIPDIKK 259
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 201 bits (513), Expect = 2e-59
Identities = 70/281 (24%), Positives = 113/281 (40%), Gaps = 29/281 (10%)
Query: 505 RIIGEGGFGVVYRGIL----DDGREVAVKVLKRANQHGGRE-FLAELEMLSRLHHRNLVK 559
R IGEG FG V++GI + VA+K K RE FL E + + H ++VK
Sbjct: 13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 72
Query: 560 LFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDS 619
L GV +N ++ EL G L S L LD + + A + LAYL
Sbjct: 73 LIGVI-TENPVWIIMELCTLGELRSFLQ---VRKYSLDLASLILYAYQLSTALAYLES-- 126
Query: 620 SPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTG 679
R +HRD + N+L+ + K+ DFGL+R +++ + ++ ++APE
Sbjct: 127 -KRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFR 184
Query: 680 HLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIES 739
SDV+ +GV + E+L P + + +
Sbjct: 185 RFTSASDVWMFGVCMWEILMHGVK-----PFQGVKNNDVIGRIENGE-------RLPMPP 232
Query: 740 NISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNE 780
N + ++ + C + S RP E+ L + E
Sbjct: 233 NCPPT----LYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 269
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 198 bits (504), Expect = 4e-58
Identities = 74/283 (26%), Positives = 105/283 (37%), Gaps = 30/283 (10%)
Query: 501 FHTSRIIGEGGFGVVYRGILD----DGREVAVKVLKR---ANQHGGREFLAELEMLSRLH 553
+G+G FGVV RG D VAVK LK + +F+ E+ + L
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 554 HRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLA 613
HRNL++L+GV +V EL GSL L G + A+ A G+
Sbjct: 70 HRNLIRLYGVV-LTPPMKMVTELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMG 125
Query: 614 YLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHI-STHVMGTFGYLA 672
YL S R IHRD + N+LL K+ DFGL R + ++ H F + A
Sbjct: 126 YLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182
Query: 673 PEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTI 732
PE T SD + +GV L E+ T + P N + E
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFTYGQE-----PWIGLNGSQILHKIDKEGE----- 232
Query: 733 IDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775
+ D + + C + RP + L
Sbjct: 233 -RLPRPEDCPQD----IYNVMVQCWAHKPEDRPTFVALRDFLL 270
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 198 bits (505), Expect = 6e-58
Identities = 67/269 (24%), Positives = 114/269 (42%), Gaps = 26/269 (9%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGV 563
IG+G G VY + + G+EVA++ + Q + E+ ++ + N+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 564 CIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRV 623
+ + +V E + GSL + +D + + L +LH S +V
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVT-----ETCMDEGQIAAVCRECLQALEFLH---SNQV 137
Query: 624 IHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLV 683
IHRD KS NILL D + K++DFG E +K + ++GT ++APE
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--STMVGTPYWMAPEVVTRKAYGP 195
Query: 684 KSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESNISY 743
K D++S G++ +E++ G P P L+A G + +P S I
Sbjct: 196 KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA--------TNGTPELQNPEKLSAIFR 247
Query: 744 DTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772
D + C+ +V R E++Q
Sbjct: 248 D-------FLNRCLDMDVEKRGSAKELLQ 269
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 195 bits (497), Expect = 1e-56
Identities = 70/288 (24%), Positives = 128/288 (44%), Gaps = 32/288 (11%)
Query: 501 FHTSRIIGEGGFGVVYRGIL------DDGREVAVKVLKRANQHGGR-EFLAELEMLSRLH 553
SR +G+G FG+VY G+ + VA+K + A R EFL E ++ +
Sbjct: 22 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN 81
Query: 554 HRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLH------GDDKVNGPLDWDARMKIALG 607
++V+L GV + ++ EL+ G L+S+L ++ V P +++A
Sbjct: 82 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGE 141
Query: 608 AARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGT 667
A G+AYL+ + + +HRD + N ++ DFT K+ DFG+ R + +
Sbjct: 142 IADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 198
Query: 668 FGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKE 727
+++PE G SDV+S+GVVL E+ T + L+ ++
Sbjct: 199 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ---------------PYQGLSNEQ 243
Query: 728 GLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775
L+ +++ + + + + MC Q RP E++ ++K
Sbjct: 244 VLRFVMEGGLLD-KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 290
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 195 bits (497), Expect = 1e-56
Identities = 62/281 (22%), Positives = 121/281 (43%), Gaps = 29/281 (10%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGRE----VAVKVLKRANQHGG-REFLAELEMLSRLHH 554
F +++G G FG VY+G+ + +G + VA+K L+ A +E L E +++ + +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 555 RNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAY 614
++ +L G+C + L+ +L+ G L L + + + + A+G+ Y
Sbjct: 71 PHVCRLLGIC-LTSTVQLITQLMPFGCL---LDYVREHKDNIGSQYLLNWCVQIAKGMNY 126
Query: 615 LHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPE 674
L + R++HRD + N+L++ K++DFGLA+ E ++ + ++A E
Sbjct: 127 LED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 183
Query: 675 YAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIID 734
+ +SDV+SYGV + EL+T P + + +I++
Sbjct: 184 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE----------------ISSILE 227
Query: 735 PVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775
+ V I C + RP E++
Sbjct: 228 KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 268
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 191 bits (485), Expect = 3e-55
Identities = 71/296 (23%), Positives = 112/296 (37%), Gaps = 39/296 (13%)
Query: 501 FHTSRIIGEGGFGVVYRGI------LDDGREVAVKVLKRANQHGG-REFLAELEMLSR-L 552
+ +G G FG V R VAVK+LK H R ++EL++L
Sbjct: 15 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 74
Query: 553 HHRNLVKLFGVCIEDNNR-CLVYELIHNGSLESHLHG------------DDKVNGPLDWD 599
HH N+V L G C + ++ E G+L ++L +D L +
Sbjct: 75 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 134
Query: 600 ARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH 659
+ + A+G+ +L S + IHRD + NILL K+ DFGLAR + +
Sbjct: 135 HLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 191
Query: 660 ISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWA 719
++APE ++SDV+S+GV+L E+ + P +
Sbjct: 192 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS-----PYPGVKIDEEF 246
Query: 720 RPLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775
LK + + + C E S RP E+V+ L
Sbjct: 247 CRR------LKEGTRMRAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHLG 292
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 187 bits (476), Expect = 4e-54
Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 11/213 (5%)
Query: 495 EKATNGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRA---NQHGGREFLAELEMLS 550
+K F +I+GEG F V L RE A+K+L++ ++ E +++S
Sbjct: 4 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 63
Query: 551 RLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAAR 610
RL H VKL+ +D NG L ++ G D
Sbjct: 64 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK----IGSFDETCTRFYTAEIVS 119
Query: 611 GLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGY 670
L YLH +IHRD K NILL D +++DFG A+ E + + +GT Y
Sbjct: 120 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 176
Query: 671 LAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
++PE SD+++ G ++ +L+ G P
Sbjct: 177 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 186 bits (473), Expect = 1e-53
Identities = 76/293 (25%), Positives = 121/293 (41%), Gaps = 41/293 (13%)
Query: 505 RIIGEGGFGVVYRGIL--------DDGREVAVKVLKR-ANQHGGREFLAELEMLSRL-HH 554
+ +GEG FG V + +VAVK+LK A + + ++E+EM+ + H
Sbjct: 19 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78
Query: 555 RNLVKLFGVCIEDNNRCLVYELIHNGSLESHLH------------GDDKVNGPLDWDARM 602
+N++ L G C +D ++ E G+L +L L +
Sbjct: 79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 138
Query: 603 KIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIST 662
A ARG+ YL S + IHRD + N+L+ D K++DFGLAR +T
Sbjct: 139 SCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 195
Query: 663 HVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPL 722
+ ++APE +SDV+S+GV+L E+ T P V L
Sbjct: 196 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG------SPYPGVPVEELFKL 249
Query: 723 LTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775
L KEG + SN + + + + C S RP ++V+ L
Sbjct: 250 L--KEGHR----MDKPSNCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDLD 292
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 187 bits (476), Expect = 2e-53
Identities = 62/277 (22%), Positives = 103/277 (37%), Gaps = 26/277 (9%)
Query: 499 NGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNL 557
+ + +G G FGVV+R G A K + ++ E++ +S L H L
Sbjct: 26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 85
Query: 558 VKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHE 617
V L +DN ++YE + G L + + + D ++ +GL ++HE
Sbjct: 86 VNLHDAFEDDNEMVMIYEFMSGGELFEKVA---DEHNKMSEDEAVEYMRQVCKGLCHMHE 142
Query: 618 DSSPRVIHRDFKSSNILL--EHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEY 675
+H D K NI+ + K+ DFGL LD T GT + APE
Sbjct: 143 ---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTA-HLDPKQSVKVTT--GTAEFAAPEV 196
Query: 676 AMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDP 735
A + +D++S GV+ LL+G P V +D
Sbjct: 197 AEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDW----------NMDD 246
Query: 736 VIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772
S IS D + + + R + + ++
Sbjct: 247 SAFSGISED----GKDFIRKLLLADPNTRMTIHQALE 279
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 183 bits (464), Expect = 1e-52
Identities = 77/292 (26%), Positives = 118/292 (40%), Gaps = 31/292 (10%)
Query: 498 TNGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRA---NQHGGREFLAELEMLSRLH 553
++ + I+G GG V+ L R+VAVKVL+ + F E + + L+
Sbjct: 6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 65
Query: 554 HRNLVKLFGVCIEDNNR----CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAA 609
H +V ++ + +V E + +L +H GP+ +++ A
Sbjct: 66 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADAC 121
Query: 610 RGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTH-VMGTF 668
+ L + H +IHRD K +NI++ KV DFG+AR D GN T V+GT
Sbjct: 122 QALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 178
Query: 669 GYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEG 728
YL+PE A + +SDVYS G VL E+LTG P P P
Sbjct: 179 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDP------- 231
Query: 729 LKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRP-FMGEVVQALKLVCN 779
I +S D + A+ + +R E+ L V N
Sbjct: 232 ---IPPSARHEGLSAD----LDAVVLKALAKNPENRYQTAAEMRADLVRVHN 276
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 184 bits (468), Expect = 3e-52
Identities = 57/271 (21%), Positives = 99/271 (36%), Gaps = 26/271 (9%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGV 563
+G G FGVV+R + GR K + E+ ++++LHH L+ L
Sbjct: 35 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDA 94
Query: 564 CIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRV 623
+ L+ E + G L + + + + A GL ++H +
Sbjct: 95 FEDKYEMVLILEFLSGGELFDRIA---AEDYKMSEAEVINYMRQACEGLKHMH---EHSI 148
Query: 624 IHRDFKSSNILLEHDFTP--KVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHL 681
+H D K NI+ E K+ DFGLA I T + APE +
Sbjct: 149 VHLDIKPENIMCETKKASSVKIIDFGLAT---KLNPDEIVKVTTATAEFAAPEIVDREPV 205
Query: 682 LVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESNI 741
+D+++ GV+ LL+G P G+++L E D S++
Sbjct: 206 GFYTDMWAIGVLGYVLLSGLSPF-----AGEDDLETLQNVKRCDWE-----FDEDAFSSV 255
Query: 742 SYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772
S + +Q E R + + ++
Sbjct: 256 SPE----AKDFIKNLLQKEPRKRLTVHDALE 282
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 177 bits (450), Expect = 2e-50
Identities = 52/280 (18%), Positives = 92/280 (32%), Gaps = 23/280 (8%)
Query: 495 EKATNGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGRE-FLAELEMLSRL 552
E + + ++G G F V + VA+K + + G E+ +L ++
Sbjct: 5 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKI 64
Query: 553 HHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGL 612
H N+V L + + L+ +L+ G L + G ++ +
Sbjct: 65 KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVE----KGFYTERDASRLIFQVLDAV 120
Query: 613 AYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLA 672
YLH+ + L+ D +SDFGL++ E + + GT GY+A
Sbjct: 121 KYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVA 177
Query: 673 PEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTI 732
PE D +S GV+ LL G P + A
Sbjct: 178 PEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEY----------E 227
Query: 733 IDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772
D +IS ++ + R + +Q
Sbjct: 228 FDSPYWDDISDS----AKDFIRHLMEKDPEKRFTCEQALQ 263
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 176 bits (448), Expect = 2e-50
Identities = 68/289 (23%), Positives = 107/289 (37%), Gaps = 41/289 (14%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRAN---------QHGGREFLAELEMLS 550
+ I+G G VV R I +E AVK++ Q L E+++L
Sbjct: 5 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 64
Query: 551 RLH-HRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAA 609
++ H N+++L + LV++L+ G L +L L KI
Sbjct: 65 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRALL 120
Query: 610 RGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFG 669
+ LH ++HRD K NILL+ D K++DFG + LD G K V GT
Sbjct: 121 EVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSC-QLDPGEKL--REVCGTPS 174
Query: 670 YLAPEYAMTGHLL------VKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLL 723
YLAPE + D++S GV++ LL G P + ++
Sbjct: 175 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQF 234
Query: 724 TTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772
+ E + S V + S + + R E +
Sbjct: 235 GSPE----------WDDYSDT----VKDLVSRFLVVQPQKRYTAEEALA 269
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 178 bits (452), Expect = 7e-50
Identities = 69/284 (24%), Positives = 113/284 (39%), Gaps = 41/284 (14%)
Query: 490 TLNDIEKATNGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRA---NQHGGREFLAE 545
T+ND F RIIG GGFG VY D G+ A+K L + + G L E
Sbjct: 2 TMND-------FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNE 54
Query: 546 ---LEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARM 602
L ++S +V + + + +L++ G L HL +G
Sbjct: 55 RIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ----HGVFSEADMR 110
Query: 603 KIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHIST 662
A GL ++H + V++RD K +NILL+ ++SD GLA +K
Sbjct: 111 FYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDF----SKKKPH 163
Query: 663 HVMGTFGYLAPEYAMTGHLL-VKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARP 721
+GT GY+APE G +D +S G +L +LL G P + + +
Sbjct: 164 ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT 223
Query: 722 LLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRP 765
+ + + S + + ++ +Q +V+ R
Sbjct: 224 -----------MAVELPDSFSPE----LRSLLEGLLQRDVNRRL 252
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 173 bits (439), Expect = 1e-48
Identities = 56/208 (26%), Positives = 87/208 (41%), Gaps = 14/208 (6%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKR---ANQHGGREFLAELEMLSR-LHHR 555
F +++G+G FG V+ + A+K LK+ + E +LS H
Sbjct: 4 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 63
Query: 556 NLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYL 615
L +F N V E ++ G L H+ D A GL +L
Sbjct: 64 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQS----CHKFDLSRATFYAAEIILGLQFL 119
Query: 616 HEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEY 675
H +++RD K NILL+ D K++DFG+ + + K GT Y+APE
Sbjct: 120 HS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT--NTFCGTPDYIAPEI 174
Query: 676 AMTGHLLVKSDVYSYGVVLLELLTGRKP 703
+ D +S+GV+L E+L G+ P
Sbjct: 175 LLGQKYNHSVDWWSFGVLLYEMLIGQSP 202
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 170 bits (431), Expect = 7e-48
Identities = 52/281 (18%), Positives = 92/281 (32%), Gaps = 29/281 (10%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGV 563
R IG G FG +Y G + G EVA+K+ +H + E ++ + +
Sbjct: 13 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRW 70
Query: 564 CIEDNNR-CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPR 622
C + + +V EL+ + + + +A + Y+H S
Sbjct: 71 CGAEGDYNVMVMELLGPSLEDLFNFC----SRKFSLKTVLLLADQMISRIEYIH---SKN 123
Query: 623 VIHRDFKSSNIL---LEHDFTPKVSDFGLARTALDEGNK-----HISTHVMGTFGYLAPE 674
IHRD K N L + + DFGLA+ D + ++ GT Y +
Sbjct: 124 FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASIN 183
Query: 675 YAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIID 734
+ + D+ S G VL+ G P + + E +
Sbjct: 184 THLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYER------ISEKKMSTPI 237
Query: 735 PVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775
V+ + A + C +P + Q +
Sbjct: 238 EVLCKGYPSE----FATYLNFCRSLRFDDKPDYSYLRQLFR 274
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 169 bits (430), Expect = 2e-47
Identities = 50/271 (18%), Positives = 87/271 (32%), Gaps = 27/271 (9%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVKLFGV 563
+G G FG+V+R + + K +K E+ +L+ HRN++ L
Sbjct: 11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD-QVLVKKEISILNIARHRNILHLHES 69
Query: 564 CIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPRV 623
+++E I + ++ L+ + L +LH S +
Sbjct: 70 FESMEELVMIFEFISGLDIFERIN---TSAFELNEREIVSYVHQVCEALQFLH---SHNI 123
Query: 624 IHRDFKSSNILL--EHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHL 681
H D + NI+ T K+ +FG AR + Y APE +
Sbjct: 124 GHFDIRPENIIYQTRRSSTIKIIEFGQARQL---KPGDNFRLLFTAPEYYAPEVHQHDVV 180
Query: 682 LVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIESNI 741
+D++S G ++ LL+G P + A D I
Sbjct: 181 STATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEY----------TFDEEAFKEI 230
Query: 742 SYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772
S + + E R E +Q
Sbjct: 231 SIE----AMDFVDRLLVKERKSRMTASEALQ 257
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 165 bits (419), Expect = 2e-46
Identities = 58/285 (20%), Positives = 108/285 (37%), Gaps = 21/285 (7%)
Query: 501 FHTSRIIGEGGFGVVYRGILDDGREVAVKVLK--RANQHGGREFLAELEMLSRLHHRNLV 558
+H IGEG +GVVY+ + G A+K ++ + ++ + E+ +L L H N+V
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 559 KLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHED 618
KL+ V LV+E + + G L+ L G+AY H
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQDLKKLLDVC----EGGLESVTAKSFLLQLLNGIAYCH-- 117
Query: 619 SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMT 678
RV+HRD K N+L+ + K++DFGLAR A + + ++ + +
Sbjct: 118 -DRRVLHRDLKPQNLLINREGELKIADFGLAR-AFGIPVRKYTHEIVTLWYRAPDVLMGS 175
Query: 679 GHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTIIDPVIE 738
D++S G + E++ G Q + +K P +
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235
Query: 739 SNISYDTLVKVAAIA-----------SMCVQPEVSHRPFMGEVVQ 772
N + + + S ++ + + R + ++
Sbjct: 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 167 bits (423), Expect = 3e-46
Identities = 65/292 (22%), Positives = 108/292 (36%), Gaps = 21/292 (7%)
Query: 498 TNGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGRE-FLAELEMLSRLHHR 555
+ IGEG +G+V + VA+K + + L E+++L R H
Sbjct: 7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 66
Query: 556 NLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYL 615
N++ + + + + + + L+ K L D RGL Y+
Sbjct: 67 NIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLK-TQHLSNDHICYFLYQILRGLKYI 125
Query: 616 HEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTAL-DEGNKHISTHVMGTFGYLAPE 674
H S V+HRD K SN+LL K+ DFGLAR A D + T + T Y APE
Sbjct: 126 H---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 182
Query: 675 YAMTGHLLVKS-DVYSYGVVLLELLTGRKP-------------VDLSQPPGQENLVAWAR 720
+ KS D++S G +L E+L+ R + + P QE+L
Sbjct: 183 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 242
Query: 721 PLLTTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772
+ V + + + K + + R + + +
Sbjct: 243 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 294
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 164 bits (416), Expect = 6e-46
Identities = 46/283 (16%), Positives = 87/283 (30%), Gaps = 31/283 (10%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRL-HHRNLVKLFG 562
R IGEG FGV++ G L + ++VA+K R + + E L + ++
Sbjct: 11 RRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA--PQLRDEYRTYKLLAGCTGIPNVYY 68
Query: 563 VCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHEDSSPR 622
E + LV +L+ S D A + +H
Sbjct: 69 FGQEGLHNVLVIDLLGP----SLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKS 121
Query: 623 VIHRDFKSSNILL-----EHDFTPKVSDFGLARTALDEGNK-----HISTHVMGTFGYLA 672
+++RD K N L+ ++ V DFG+ + D K ++ GT Y++
Sbjct: 122 LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMS 181
Query: 673 PEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTI 732
+ + D+ + G V + L G P + + E ++
Sbjct: 182 INTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERI------GEKKQST 235
Query: 733 IDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQALK 775
+ + + P +
Sbjct: 236 PLRELCAGFPEE----FYKYMHYARNLAFDATPDYDYLQGLFS 274
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 164 bits (416), Expect = 9e-46
Identities = 68/298 (22%), Positives = 111/298 (37%), Gaps = 30/298 (10%)
Query: 496 KATNGFHTSRIIGEGGFGVVYRG--ILDDGREVAVKVLKRANQHGGRE-----FLAELEM 548
+A + IGEG +G V++ + + GR VA+K ++ G +A L
Sbjct: 4 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 63
Query: 549 LSRLHHRNLVKLFGVCI-----EDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMK 603
L H N+V+LF VC + LV+E + + D + +
Sbjct: 64 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTT---YLDKVPEPGVPTETIKD 120
Query: 604 IALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTH 663
+ RGL +LH S RV+HRD K NIL+ K++DFGLAR + T
Sbjct: 121 MMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMALTS 174
Query: 664 VMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLL 723
V+ T Y APE + D++S G + E+ + S Q + L
Sbjct: 175 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLP 234
Query: 724 TTKEGLKTIIDP-VIESNISYDTLVKVAAIAS--------MCVQPEVSHRPFMGEVVQ 772
++ + + P + S + K C+ + R +
Sbjct: 235 GEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 292
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 164 bits (416), Expect = 1e-45
Identities = 60/219 (27%), Positives = 94/219 (42%), Gaps = 23/219 (10%)
Query: 489 FTLNDIEKATNGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKR---ANQHGGREFLA 544
++L D F R +G G FG V+ +GR A+KVLK+
Sbjct: 1 YSLQD-------FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTND 53
Query: 545 ELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKI 604
E MLS + H +++++G + ++ + I G L S L +
Sbjct: 54 ERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLR----KSQRFPNPVAKFY 109
Query: 605 ALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHV 664
A L YLH +I+RD K NILL+ + K++DFG A+ D + +
Sbjct: 110 AAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV-----TYTL 161
Query: 665 MGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
GT Y+APE T D +S+G+++ E+L G P
Sbjct: 162 CGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 200
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 161 bits (409), Expect = 7e-45
Identities = 55/206 (26%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKR--ANQHGGREFLAELEMLSRLHHRNL 557
F IGEG +GVVY+ G VA+K ++ + + E+ +L L+H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 558 VKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHE 617
VKL V +N LV+E +H + + +GLA+ H
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDA---SALTGIPLPLIKSYLFQLLQGLAFCH- 119
Query: 618 DSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAM 677
S RV+HRD K N+L+ + K++DFGLAR A + + V+ +
Sbjct: 120 --SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAPEILLG 176
Query: 678 TGHLLVKSDVYSYGVVLLELLTGRKP 703
+ D++S G + E++T R
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRAL 202
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 160 bits (405), Expect = 2e-44
Identities = 64/289 (22%), Positives = 111/289 (38%), Gaps = 34/289 (11%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGRE-----FLAELEMLSRLHHRNLV 558
+GEG F VY+ + + VA+K +K ++ ++ L E+++L L H N++
Sbjct: 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63
Query: 559 KLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHED 618
L +N LV++ + + L L +GL YLH
Sbjct: 64 GLLDAFGHKSNISLVFDFMETDLEVIIKDN----SLVLTPSHIKAYMLMTLQGLEYLH-- 117
Query: 619 SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMT 678
++HRD K +N+LL+ + K++DFGLA++ + TH + T Y APE
Sbjct: 118 -QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAY--THQVVTRWYRAPELLFG 174
Query: 679 GHLL-VKSDVYSYGVVLLELLTGRKPVD--------------LSQPPGQENLVAWARPLL 723
+ V D+++ G +L ELL + L P ++ + P
Sbjct: 175 ARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDY 234
Query: 724 TTKEGLKTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772
T + I I S D L + R + ++
Sbjct: 235 VTFKSFPGIPLHHIFSAAGDDLL----DLIQGLFLFNPCARITATQALK 279
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 159 bits (403), Expect = 3e-44
Identities = 65/283 (22%), Positives = 107/283 (37%), Gaps = 35/283 (12%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGR------EFLAELEMLSRLH 553
+ T +G G F VV + G + A K +K+ R + E+ +L +
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 554 HRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLA 613
H N++ L V + L+ EL+ G L L L + + G+
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVY 127
Query: 614 YLHEDSSPRVIHRDFKSSNILLEHDFTP----KVSDFGLARTALDEGNKHISTHVMGTFG 669
YLH S ++ H D K NI+L P K+ DFGLA +D GN+ ++ GT
Sbjct: 128 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH-KIDFGNEF--KNIFGTPE 181
Query: 670 YLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGL 729
++APE L +++D++S GV+ LL+G P V+
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY-------- 233
Query: 730 KTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772
+ SN S + + R + + +Q
Sbjct: 234 --EFEDEYFSNTSAL----AKDFIRRLLVKDPKKRMTIQDSLQ 270
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 160 bits (405), Expect = 6e-44
Identities = 64/325 (19%), Positives = 119/325 (36%), Gaps = 38/325 (11%)
Query: 503 TSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRL-HHRNLVKL 560
TS+++G G G V + + A+K+L+ + E+E+ R ++V++
Sbjct: 16 TSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRI 70
Query: 561 FGVC----IEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLH 616
V +V E + G L S + D+ + +I + YLH
Sbjct: 71 VDVYENLYAGRKCLLIVMECLDGGELFSRIQ--DRGDQAFTEREASEIMKSIGEAIQYLH 128
Query: 617 EDSSPRVIHRDFKSSNILL---EHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAP 673
S + HRD K N+L + K++DFG A+ + T Y+AP
Sbjct: 129 ---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT---TPCYTPYYVAP 182
Query: 674 EYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGLKTII 733
E D++S GV++ LL G P L + G
Sbjct: 183 EVLGPEKYDKSCDMWSLGVIMYILLCGYPP-----FYSNHGLAISPGMKTRIRMGQYEFP 237
Query: 734 DPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEV------VQALKLVCNEFDETKET 787
+P S +S + V + ++ E + R + E +Q+ K+ ++
Sbjct: 238 NP-EWSEVSEE----VKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVL 292
Query: 788 IESRDLSEDCSISVDSKVNRLSGEF 812
E ++ ED + S + + ++
Sbjct: 293 KEDKERWEDVKEEMTSALATMRVDY 317
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 158 bits (399), Expect = 5e-43
Identities = 55/211 (26%), Positives = 86/211 (40%), Gaps = 18/211 (8%)
Query: 501 FHTSRIIGEGGFGVVYRGIL-DDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNLVK 559
+ +++IG G FGVVY+ L D G VA+K + + R EL+++ +L H N+V+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVR 77
Query: 560 LFGVCIEDNNR------CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLA 613
L + LV + + H L R LA
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA-KQTLPVIYVKLYMYQLFRSLA 136
Query: 614 YLHEDSSPRVIHRDFKSSNILLEHD-FTPKVSDFGLARTALDEGNKHISTHVMGTFGYLA 672
Y+H S + HRD K N+LL+ D K+ DFG A+ + + +++ +
Sbjct: 137 YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--GEPNVSYICSRYYRAP 191
Query: 673 PEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
DV+S G VL ELL G+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 154 bits (390), Expect = 1e-42
Identities = 54/283 (19%), Positives = 95/283 (33%), Gaps = 45/283 (15%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRAN------QHGGREFLAELEMLSRLH 553
+ ++G GGFG VY GI + D VA+K +++ G E+ +L ++
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 554 --HRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARG 611
+++L ++ L+ E G L +
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEELARSFFWQVLEA 122
Query: 612 LAYLHEDSSPRVIHRDFKSSNILL-EHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGY 670
+ + H V+HRD K NIL+ + K+ DFG + T GT Y
Sbjct: 123 VRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY 175
Query: 671 LAPEYAMTGHLLVKS-DVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTTKEGL 729
PE+ +S V+S G++L +++ G P E ++
Sbjct: 176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP-----FEHDEEIIRG----------- 219
Query: 730 KTIIDPVIESNISYDTLVKVAAIASMCVQPEVSHRPFMGEVVQ 772
+S + + C+ S RP E+
Sbjct: 220 ----QVFFRQRVSSE----CQHLIRWCLALRPSDRPTFEEIQN 254
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 154 bits (390), Expect = 6e-42
Identities = 59/218 (27%), Positives = 88/218 (40%), Gaps = 20/218 (9%)
Query: 490 TLNDIEKATNGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGRE---FLAE 545
T+ND F +++G+G FG V GR A+K+L++ E + E
Sbjct: 3 TMND-------FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTE 55
Query: 546 LEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIA 605
+L H L L + C V E + G L HL + +
Sbjct: 56 SRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFYG 111
Query: 606 LGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVM 665
L YLH V++RD K N++L+ D K++DFGL + + +G
Sbjct: 112 AEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK--TFC 166
Query: 666 GTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKP 703
GT YLAPE D + GVV+ E++ GR P
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 153 bits (387), Expect = 2e-41
Identities = 51/237 (21%), Positives = 89/237 (37%), Gaps = 14/237 (5%)
Query: 487 KTFTLNDIEKATNGFHTS----RIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGG-- 539
F ++ K + +G G +G V + G +VA+K L R Q
Sbjct: 2 SGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFA 61
Query: 540 REFLAELEMLSRLHHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWD 599
+ EL +L + H N++ L V D + G + L D
Sbjct: 62 KRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGED 121
Query: 600 ARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKH 659
+ +GL Y+H + +IHRD K N+ + D K+ DFGLAR + +
Sbjct: 122 RIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLAR----QADSE 174
Query: 660 ISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLV 716
++ +V+ + D++S G ++ E++TG+ S Q +
Sbjct: 175 MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEI 231
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 149 bits (377), Expect = 9e-41
Identities = 53/206 (25%), Positives = 85/206 (41%), Gaps = 11/206 (5%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGG--REFLAELEMLSRLHHRNL 557
+ IGEG +G V++ + VA+K ++ + G L E+ +L L H+N+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 558 VKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHE 617
V+L V D LV+E D NG LD + +GL + H
Sbjct: 64 VRLHDVLHSDKKLTLVFEFCDQ----DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 618 DSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAM 677
V+HRD K N+L+ + K+++FGLAR A + S V+ +
Sbjct: 120 ---RNVLHRDLKPQNLLINRNGELKLANFGLAR-AFGIPVRCYSAEVVTLWYRPPDVLFG 175
Query: 678 TGHLLVKSDVYSYGVVLLELLTGRKP 703
D++S G + EL +P
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAGRP 201
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 148 bits (374), Expect = 5e-40
Identities = 52/226 (23%), Positives = 96/226 (42%), Gaps = 25/226 (11%)
Query: 492 NDIEKATNGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGG--REFLAELEM 548
+++ K + IG+G FG V++ G++VA+K + N+ G L E+++
Sbjct: 7 DEVSK----YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKI 62
Query: 549 LSRLHHRNLVKLFGVCIE--------DNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDA 600
L L H N+V L +C + LV++ + + V
Sbjct: 63 LQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN----VLVKFTLSE 118
Query: 601 RMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR--TALDEGNK 658
++ GL Y+H +++HRD K++N+L+ D K++DFGLAR +
Sbjct: 119 IKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP 175
Query: 659 HISTHVMGTFGYLAPEYAMTGHLL-VKSDVYSYGVVLLELLTGRKP 703
+ T+ + T Y PE + D++ G ++ E+ T
Sbjct: 176 NRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPI 221
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 146 bits (368), Expect = 7e-39
Identities = 56/227 (24%), Positives = 93/227 (40%), Gaps = 16/227 (7%)
Query: 499 NGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGRE---FLAELEMLSRLHH 554
+ F + +G G FG V + G A+K+L + ++ L E +L ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 555 RNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAY 614
LVKL +++N +V E + G + SHL G A Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR----IGRFSEPHARFYAAQIVLTFEY 156
Query: 615 LHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPE 674
LH S +I+RD K N+L++ +V+DFG A+ K + + GT LAPE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWTLCGTPEALAPE 208
Query: 675 YAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARP 721
++ D ++ GV++ E+ G P QP + +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 255
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 136 bits (343), Expect = 7e-36
Identities = 43/211 (20%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 499 NGFHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRL-HHRN 556
+ + R +G G + V+ I + + +V VK+LK + ++ E+++L L N
Sbjct: 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK---KKIKREIKILENLRGGPN 91
Query: 557 LVKLFGVCIEDNNR--CLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAY 614
++ L + + +R LV+E ++N + L + L Y
Sbjct: 92 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ-------TLTDYDIRFYMYEILKALDY 144
Query: 615 LHEDSSPRVIHRDFKSSNILLEHDF-TPKVSDFGLARTALDEGNKHISTHVMGTFGYLAP 673
H S ++HRD K N++++H+ ++ D+GLA G ++ + + + P
Sbjct: 145 CH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF-YHPGQEY--NVRVASRYFKGP 198
Query: 674 EYAMTGHLL-VKSDVYSYGVVLLELLTGRKP 703
E + + D++S G +L ++ ++P
Sbjct: 199 ELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 229
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 136 bits (342), Expect = 9e-36
Identities = 55/216 (25%), Positives = 87/216 (40%), Gaps = 19/216 (8%)
Query: 499 NGFHTSRIIGEGGFGVVYRGIL----DDGREVAVKVLKRAN----QHGGREFLAELEMLS 550
F +++G G +G V+ D G+ A+KVLK+A E ++L
Sbjct: 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 83
Query: 551 RL-HHRNLVKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAA 609
+ LV L + L+ + I+ G L +HL
Sbjct: 84 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQ----RERFTEHEVQIYVGEIV 139
Query: 610 RGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFG 669
L +LH+ +I+RD K NILL+ + ++DFGL++ + GT
Sbjct: 140 LALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSK-EFVADETERAYDFCGTIE 195
Query: 670 YLAPEYAMTGHLLV--KSDVYSYGVVLLELLTGRKP 703
Y+AP+ G D +S GV++ ELLTG P
Sbjct: 196 YMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 231
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 136 bits (344), Expect = 1e-35
Identities = 61/225 (27%), Positives = 95/225 (42%), Gaps = 22/225 (9%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRA--NQHGGREFLAELEMLSRLHHRNL 557
+ + IG G G+V R VA+K L R NQ + EL ++ ++H+N+
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78
Query: 558 VKLFGVCI------EDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARG 611
+ L V E + LV EL+ + D + + G
Sbjct: 79 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-------HERMSYLLYQMLCG 131
Query: 612 LAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYL 671
+ +LH S +IHRD K SNI+++ D T K+ DFGLART G + T + T Y
Sbjct: 132 IKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRYYR 185
Query: 672 APEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLV 716
APE + D++S G ++ E++ + Q N V
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKV 230
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 133 bits (336), Expect = 9e-35
Identities = 54/206 (26%), Positives = 81/206 (39%), Gaps = 10/206 (4%)
Query: 501 FHTSRIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGG--REFLAELEMLSRLHHRNL 557
+ +G G +G V G VAVK L R Q + EL +L + H N+
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
Query: 558 VKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAARGLAYLHE 617
+ L V + ++ L + L D + RGL Y+H
Sbjct: 80 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 138
Query: 618 DSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAM 677
S +IHRD K SN+ + D K+ DFGLAR + ++ +V +
Sbjct: 139 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRAPEIMLN 192
Query: 678 TGHLLVKSDVYSYGVVLLELLTGRKP 703
H D++S G ++ ELLTGR
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTL 218
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 122 bits (306), Expect = 1e-30
Identities = 41/215 (19%), Positives = 83/215 (38%), Gaps = 17/215 (7%)
Query: 505 RIIGEGGFGVVYRGI-LDDGREVAVKVLKRANQHGGREFLAELEMLSRLHHRNL------ 557
R +G G F V+ + + VA+K+++ ++ E+++L R++ +
Sbjct: 19 RKLGWGHFSTVWLAKDMVNNTHVAMKIVRG-DKVYTEAAEDEIKLLQRVNDADNTKEDSM 77
Query: 558 -----VKLFGVCIEDNNRCLVYELIHNGSLESHLHGDDKV-NGPLDWDARMKIALGAARG 611
+KL + ++ E+ L K + + +I+ G
Sbjct: 78 GANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLG 137
Query: 612 LAYLHEDSSPRVIHRDFKSSNILLE-HDFTPKVSDFGLARTALDEGNKHISTHVMGTFGY 670
L Y+H +IH D K N+L+E D + +A T+ + T Y
Sbjct: 138 LDYMHRR--CGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREY 195
Query: 671 LAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVD 705
+PE + +D++S ++ EL+TG +
Sbjct: 196 RSPEVLLGAPWGCGADIWSTACLIFELITGDFLFE 230
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 108 bits (271), Expect = 9e-28
Identities = 27/161 (16%), Positives = 51/161 (31%), Gaps = 29/161 (18%)
Query: 505 RIIGEGGFGVVYRGILDDGREVAVKVLKRAN----------QHGGREFLAELEMLSRLHH 554
+++GEG V+ + E VK K + +G F +R
Sbjct: 6 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEF 65
Query: 555 RNLVKLFGVCIED----NNRCLVYELIHNGSLESHLHGDDKVNGPLDWDARMKIALGAAR 610
R L KL G+ + ++ ELI L + ++
Sbjct: 66 RALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRV-----------RVENPDEVLDMILE 114
Query: 611 GLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLART 651
+A + ++H D N+L+ + + DF +
Sbjct: 115 EVAKFY---HRGIVHGDLSQYNVLV-SEEGIWIIDFPQSVE 151
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 897 | |||
| d2bhua3 | 420 | Glycosyltrehalose trehalohydrolase, central domain | 100.0 | |
| d2df7a1 | 419 | Birnavirus VP2 {Infectious bursal disease virus [T | 100.0 | |
| d1ejda_ | 419 | UDP-N-acetylglucosamine enolpyruvyl transferase (E | 100.0 | |
| d1om4a_ | 418 | Nitric oxide (NO) synthase oxygenase domain {Rat ( | 100.0 | |
| d2gp4a2 | 418 | 6-phosphogluconate dehydratase EDD {Shewanella one | 100.0 | |
| d1f61a_ | 418 | Isocitrate lyase {Mycobacterium tuberculosis [TaxI | 100.0 | |
| d2r5ea1 | 418 | Kynurenine--oxoglutarate transaminase I {Yellowfev | 100.0 | |
| d1w7la_ | 418 | Kynurenine--oxoglutarate transaminase I {Human (Ho | 100.0 | |
| d1pv7a_ | 417 | Lactose permease {Escherichia coli [TaxId: 562]} | 100.0 | |
| d3bona1 | 417 | Botulinum neurotoxin {Clostridium botulinum, serot | 100.0 | |
| d1q7ea_ | 417 | Hypothetical protein YfdW {Escherichia coli [TaxId | 100.0 | |
| d2csga1 | 417 | Hypothetical protein YbiU {Salmonella typhimurium | 100.0 | |
| d1ltka_ | 417 | Phosphoglycerate kinase {Malaria parasite (Plasmod | 100.0 | |
| d1gff1_ | 417 | Microvirus capsid proteins {Bacteriophage G4 [TaxI | 100.0 | |
| d1w6ga1 | 417 | Copper amine oxidase, domain 3 {Arthrobacter globi | 100.0 | |
| d1vema2 | 417 | Bacterial beta-amylase {Bacillus cereus [TaxId: 13 | 100.0 | |
| d1q2oa_ | 416 | Nitric oxide (NO) synthase oxygenase domain {Cow ( | 100.0 | |
| d1dfoa_ | 416 | Serine hydroxymethyltransferase {Escherichia coli | 100.0 | |
| d1d8wa_ | 416 | L-rhamnose isomerase {Escherichia coli [TaxId: 562 | 100.0 | |
| d1igwa_ | 416 | Isocitrate lyase {Escherichia coli [TaxId: 562]} | 100.0 | |
| d2vnud4 | 416 | Exosome complex exonuclease RRP44 {Saccharomyces c | 100.0 | |
| d1pb1a_ | 416 | Isocitrate dehydrogenase, ICDH {Escherichia coli [ | 100.0 | |
| d1dnva_ | 415 | Densovirus capsid protein {Galleria mellonella den | 100.0 | |
| d1so2a_ | 415 | cGMP-inhibited 3',5'-cyclic phosphodiesterase B, p | 100.0 | |
| d2ieaa2 | 415 | Pyruvate dehydrogenase E1 component, PP module {Es | 100.0 | |
| d16pka_ | 415 | Phosphoglycerate kinase {Trypanosoma brucei [TaxId | 100.0 | |
| d1qpga_ | 415 | Phosphoglycerate kinase {Baker's yeast (Saccharomy | 100.0 | |
| d2qeec1 | 415 | Uncharacterized protein BH0493 {Bacillus haloduran | 100.0 | |
| d1s5ja2 | 415 | Family B DNA polymerase {Sulfolobus solfataricus [ | 100.0 | |
| d1kbia1 | 414 | Flavocytochrome b2, C-terminal domain {Baker's yea | 100.0 | |
| d2b8na1 | 414 | Putative glycerate kinase (hypothetical protein TM | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1t0la_ | 414 | NADP-dependent isocitrate dehydrogenase {Human (Ho | 100.0 | |
| d1vh4a_ | 413 | Stabilizer of iron transporter SufD {Escherichia c | 100.0 | |
| d1hdia_ | 413 | Phosphoglycerate kinase {Pig (Sus scrofa) [TaxId: | 100.0 | |
| d2qgma1 | 413 | Succinoglycan biosynthesis protein BC3205 {Bacillu | 100.0 | |
| d1lwda_ | 413 | NADP-dependent isocitrate dehydrogenase {Pig (Sus | 100.0 | |
| d1t5la1 | 413 | Nucleotide excision repair enzyme UvrB {Bacillus c | 100.0 | |
| d1zjca1 | 413 | Aminopeptidase S, AMPS {Staphylococcus aureus [Tax | 100.0 | |
| d1ulva1 | 413 | Glucodextranase, domain A {Arthrobacter globiformi | 100.0 | |
| d1a0tp_ | 413 | Sucrose-specific porin {Enterobacterium (Salmonell | 100.0 | |
| d1ocka_ | 412 | Malonamidase E2 {Bradyrhizobium japonicum [TaxId: | 100.0 | |
| d1yzya1 | 412 | Hypothetical protein HI1011 {Haemophilus influenza | 100.0 | |
| d1yaaa_ | 412 | Aspartate aminotransferase, AAT {Baker's yeast (Sa | 100.0 | |
| d1bw0a_ | 412 | Tyrosine aminotransferase (TAT) {Trypanosoma cruzi | 100.0 | |
| d1rxxa_ | 412 | Arginine deiminase {Pseudomonas aeruginosa [TaxId: | 100.0 | |
| d1ajsa_ | 412 | Aspartate aminotransferase, AAT {Pig (Sus scrofa), | 100.0 | |
| d1ufaa2 | 412 | Hypothetical protein TT1467, N-terminal domain {Th | 100.0 | |
| d1t3ca_ | 411 | Botulinum neurotoxin {Clostridium botulinum, serot | 100.0 | |
| d2afaa1 | 411 | Putative NAG isomerase YihS {Salmonella typhimuriu | 100.0 | |
| d1ux5a_ | 411 | Bni1 {Baker's yeast (Saccharomyces cerevisiae) [Ta | 100.0 | |
| d1izoa_ | 411 | Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis | 100.0 | |
| d2ccaa1 | 410 | Catalase-peroxidase KatG {Mycobacterium tuberculos | 100.0 | |
| d1p1ja1 | 410 | Myo-inositol 1-phosphate synthase {Baker's yeast ( | 100.0 | |
| d1kfsa2 | 410 | DNA polymerase I (Klenow fragment) {Escherichia co | 100.0 | |
| d1uuqa_ | 410 | Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | 100.0 | |
| d1s5ja1 | 410 | Exonuclease domain of family B DNA polymerases {Su | 100.0 | |
| d2cmza1 | 409 | Spike glycoprotein {Vesicular stomatitis indiana v | 100.0 | |
| d2g0da1 | 409 | Nisin biosynthesis protein NisC {Lactococcus lacti | 100.0 | |
| d1tv5a1 | 409 | Dihydroorotate dehydrogenase {Plasmodium falciparu | 100.0 | |
| d1qtma2 | 409 | DNA polymerase I (Klenow fragment) {Thermus aquati | 100.0 | |
| d1b25a1 | 409 | Formaldehyde ferredoxin oxidoreductase {Archaeon P | 100.0 | |
| d1s9ra_ | 409 | Arginine deiminase {Mycoplasma arginini [TaxId: 20 | 100.0 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 100.0 | |
| d1dkla_ | 409 | Phytase (myo-inositol-hexakisphosphate-3-phosphohy | 100.0 | |
| d1wzaa2 | 409 | Bacterial alpha-amylase {Halothermothrix orenii [T | 100.0 | |
| d1f1oa_ | 408 | Adenylosuccinate lyase {Bacillus subtilis [TaxId: | 100.0 | |
| d1r76a_ | 408 | Polygalacturonic acid lyase (pectate lyase) {Azosp | 100.0 | |
| d1n11a_ | 408 | Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1t3ia_ | 408 | Probable cysteine desulfurase SufS {Synechocystis | 100.0 | |
| d1h4pa_ | 408 | Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom | 100.0 | |
| d1c4oa1 | 408 | Nucleotide excision repair enzyme UvrB {Thermus th | 100.0 | |
| d2hhva2 | 408 | DNA polymerase I (Klenow fragment) {Bacillus stear | 100.0 | |
| d1qs0a_ | 407 | 2-oxoisovalerate dehydrogenase (E1B), PP module {P | 100.0 | |
| d1eu8a_ | 407 | D-maltodextrin-binding protein, MBP {Archaeon Ther | 100.0 | |
| d1qhoa4 | 407 | Cyclodextrin glycosyltransferase {Bacillus stearot | 100.0 | |
| d1itka1 | 406 | Catalase-peroxidase KatG {Archaeon Haloarcula mari | 100.0 | |
| d1mwva1 | 406 | Catalase-peroxidase KatG {Burkholderia pseudomalle | 100.0 | |
| d1u2za_ | 406 | Catalytic, N-terminal domain of histone methyltran | 100.0 | |
| d1ei6a_ | 406 | Phosphonoacetate hydrolase {Pseudomonas fluorescen | 100.0 | |
| d1ub2a1 | 406 | Catalase-peroxidase KatG {Synechococcus sp. pcc 79 | 100.0 | |
| d2ayia1 | 406 | Aminopeptidase T {Thermus thermophilus [TaxId: 274 | 100.0 | |
| d3bmva4 | 406 | Cyclodextrin glycosyltransferase {Thermoanaerobact | 100.0 | |
| d1kl1a_ | 405 | Serine hydroxymethyltransferase {Bacillus stearoth | 100.0 | |
| d2nwwa1 | 405 | Proton glutamate symport protein {Pyrococcus horik | 100.0 | |
| d1h6za3 | 405 | Pyruvate phosphate dikinase, N-terminal domain {Tr | 100.0 | |
| d1jf9a_ | 405 | NifS-like protein/selenocysteine lyase {Escherichi | 100.0 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 100.0 | |
| d1qz9a_ | 404 | Kynureninase {Pseudomonas fluorescens [TaxId: 294] | 100.0 | |
| d1re9a_ | 404 | Cytochrome P450-CAM {Pseudomonas putida [TaxId: 30 | 100.0 | |
| d1z7da1 | 404 | Ornithine aminotransferase {Plasmodium yoelii yoel | 100.0 | |
| d1h12a_ | 404 | Endo-1,4-beta-xylanase {Pseudoalteromonas haloplan | 100.0 | |
| d2b5dx2 | 404 | Alpha-amylase AmyC {Thermotoga maritima [TaxId: 23 | 100.0 | |
| d2byla1 | 404 | Ornithine aminotransferase {Human (Homo sapiens) [ | 100.0 | |
| d1uyra2 | 404 | Acetyl-coenzyme A carboxylase {Baker's yeast (Sacc | 100.0 | |
| d1gwia_ | 403 | Cyp154c1 monooxygenase {Streptomyces coelicolor [T | 100.0 | |
| d1wsta1 | 403 | Multiple substrate aminotransferase, MSAT {Thermoc | 100.0 | |
| d1ueda_ | 403 | p450 monoxygenase OxyC {Amycolatopsis orientalis [ | 100.0 | |
| d1xksa_ | 403 | Nuclear pore complex protein Nup133 {Human (Homo s | 100.0 | |
| d1hx0a2 | 403 | Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 | 100.0 | |
| d3b55a1 | 403 | Succinoglycan biosynthesis protein BC3120 {Bacillu | 100.0 | |
| d1dofa_ | 402 | Adenylosuccinate lyase {Archaeon Pyrobaculum aerop | 100.0 | |
| d2g5da1 | 402 | Membrane-bound lytic murein transglycosylase A, ML | 100.0 | |
| d1xk7a1 | 402 | Crotonobetainyl-CoA:carnitine CoA-transferase, Cai | 100.0 | |
| d1z8oa1 | 402 | Cytochrome P450-ERYF {Saccharopolyspora erythraea | 100.0 | |
| d1fp3a_ | 402 | N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) | 100.0 | |
| g1w2w.1 | 402 | Putative methylthioribose-1-phosphate isomerase Yp | 100.0 | |
| d1odoa_ | 401 | Cyp154a1 monooxygenase {Streptomyces coelicolor [T | 100.0 | |
| d1p9ra_ | 401 | Extracellular secretion NTPase EpsE {Vibrio choler | 100.0 | |
| d1fc4a_ | 401 | 2-amino-3-ketobutyrate CoA ligase {Escherichia col | 100.0 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 100.0 | |
| d1q5da_ | 401 | Cytochrome P450epok {Sorangium cellulosum [TaxId: | 100.0 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 100.0 | |
| d1a12a_ | 401 | Regulator of chromosome condensation RCC1 {Human ( | 100.0 | |
| d1jdpa_ | 401 | Hormone binding domain of the atrial natriuretic p | 100.0 | |
| d7aata_ | 401 | Aspartate aminotransferase, AAT {Chicken (Gallus g | 100.0 | |
| d2h6fb1 | 401 | Protein farnesyltransferase, beta-subunit {Human ( | 100.0 | |
| d2r7da2 | 401 | Ribonuclease II family protein DR0020 {Deinococcus | 100.0 | |
| d1tq4a_ | 400 | Interferon-inducible GTPase {Mouse (Mus musculus) | 100.0 | |
| d3ovwa_ | 400 | Cellobiohydrolase I (cellulase, Endoglucanase I, C | 100.0 | |
| d1ru4a_ | 400 | Pectate transeliminase {Erwinia chrysanthemi [TaxI | 100.0 | |
| d1inpa_ | 400 | Inositol polyphosphate 1-phosphatase {Cow (Bos tau | 100.0 | |
| d2olua2 | 400 | Penicillin-binding protein 2, PBP2 {Staphylococcus | 100.0 | |
| d1eh9a3 | 400 | Glycosyltrehalose trehalohydrolase, central domain | 100.0 | |
| d1ojja_ | 399 | Cellobiohydrolase I (cellulase, Endoglucanase I, C | 100.0 | |
| d1s1fa_ | 399 | Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} | 100.0 | |
| d1oyaa_ | 399 | Old yellow enzyme (OYE) {Lager yeast (Saccharomyce | 100.0 | |
| d1jfba_ | 399 | Cytochrome P450-NOR, nitric reductase {Fungus (Fus | 100.0 | |
| d2ah2a2 | 399 | Trypanosoma sialidase {Parasitic flagellate protoz | 100.0 | |
| d1bn8a_ | 399 | Pectate lyase {Bacillus subtilis [TaxId: 1423]} | 100.0 | |
| d1qgna_ | 398 | Cystathionine gamma-synthase, CGS {Common tobacco | 100.0 | |
| d1vpea_ | 398 | Phosphoglycerate kinase {Thermotoga maritima [TaxI | 100.0 | |
| d1vlja_ | 398 | NADH-dependent butanol dehydrogenase A (TM0820) {T | 100.0 | |
| d1y4ia1 | 397 | Methionine gamma-lyase, MGL {Citrobacter freundii | 100.0 | |
| d1q1la_ | 397 | Chorismate synthase, AroC {Aquifex aeolicus [TaxId | 100.0 | |
| d1vkoa1 | 397 | Myo-inositol 1-phosphate synthase {Caenorhabditis | 100.0 | |
| d3tata_ | 397 | Aromatic aminoacid aminotransferase, AroAT {Escher | 100.0 | |
| d1vjva_ | 397 | Ubiquitin carboxyl-terminal hydrolase 6 {Baker's y | 100.0 | |
| d1lf6a1 | 397 | Bacterial glucoamylase, C-terminal domain {Thermoa | 100.0 | |
| d2q7wa1 | 396 | Aspartate aminotransferase, AAT {Escherichia coli | 100.0 | |
| d2bwna1 | 396 | 5-aminolevulinate synthase {Rhodobacter capsulatus | 100.0 | |
| d1m7xa3 | 396 | 1,4-alpha-glucan branching enzyme, central domain | 100.0 | |
| d1io1a_ | 395 | Phase 1 flagellin {Salmonella typhimurium [TaxId: | 100.0 | |
| g1f8v.1 | 395 | Alphanodavirus capsid protein {Pariacoto virus [Ta | 100.0 | |
| d2bfda1 | 395 | Branched-chain alpha-keto acid dehydrogenase, PP m | 100.0 | |
| d1n40a_ | 395 | Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tub | 100.0 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 100.0 | |
| d2py6a1 | 395 | Methyltransferase FkbM {Methylobacillus flagellatu | 100.0 | |
| d1aora1 | 395 | Aldehyde ferredoxin oxidoreductase {Archaeon Pyroc | 100.0 | |
| d1xi9a_ | 395 | Putative alanine aminotransferase {Pyrococcus furi | 100.0 | |
| d1w36b2 | 395 | Exodeoxyribonuclease V beta chain (RecB), N-termin | 100.0 | |
| d1phpa_ | 394 | Phosphoglycerate kinase {Bacillus stearothermophil | 100.0 | |
| d1e5ea_ | 394 | Methionine gamma-lyase, MGL {Trichomonas vaginalis | 100.0 | |
| d2ay1a_ | 394 | Aromatic aminoacid aminotransferase, AroAT {Paraco | 100.0 | |
| d1u1ha1 | 394 | 5-methyltetrahydropteroyltriglutamate--homocystein | 100.0 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 100.0 | |
| d1q8ia2 | 394 | Family B DNA polymerase {Escherichia coli [TaxId: | 100.0 | |
| d1c7na_ | 394 | Cystalysin {Treponema denticola [TaxId: 158]} | 100.0 | |
| d1lfka_ | 394 | p450 monoxygenase OxyB {Amycolatopsis orientalis [ | 100.0 | |
| d1atia2 | 394 | Glycyl-tRNA synthetase (GlyRS) {Thermus thermophil | 100.0 | |
| d2pb1a1 | 394 | Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) | 100.0 | |
| d2d3na2 | 394 | Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: | 100.0 | |
| d1ldja2 | 394 | Cullin homolog 1, Cul-1 {Human (Homo sapiens) [Tax | 100.0 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 100.0 | |
| d1n8pa_ | 393 | Cystathionine gamma-lyase (CYS3) {Baker's yeast (S | 100.0 | |
| d1xlma_ | 393 | D-xylose isomerase {Arthrobacter, strain b3728 [Ta | 100.0 | |
| d1kwga2 | 393 | A4 beta-galactosidase {Thermus thermophilus [TaxId | 100.0 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 100.0 | |
| d1g8ma2 | 393 | AICAR transformylase domain of bifunctional purine | 100.0 | |
| d1hvxa2 | 393 | Bacterial alpha-amylase {Bacillus stearothermophil | 100.0 | |
| d1e43a2 | 393 | Bacterial alpha-amylase {Chimera (Bacillus amyloli | 100.0 | |
| d1yvua2 | 392 | Argonaute homologue Aq_1447 {Aquifex aeolicus [Tax | 100.0 | |
| d1gc0a_ | 392 | Methionine gamma-lyase, MGL {Pseudomonas putida [T | 100.0 | |
| d2d0ta1 | 392 | Indoleamine 2,3-dioxygenase {Human (Homo sapiens) | 100.0 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 100.0 | |
| d1xima_ | 392 | D-xylose isomerase {Actinoplanes missouriensis [Ta | 100.0 | |
| d1cl1a_ | 391 | Cystathionine beta-lyase, CBL {Escherichia coli [T | 100.0 | |
| d1gpea1 | 391 | Glucose oxidase {Penicillium amagasakiense [TaxId: | 100.0 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 100.0 | |
| d1nt4a_ | 391 | Glucose-1-phosphatase {Escherichia coli [TaxId: 56 | 100.0 | |
| d1p3wa_ | 391 | Cysteine desulfurase IscS {Escherichia coli [TaxId | 100.0 | |
| d1lwha2 | 391 | 4-alpha-glucanotransferase {Thermotoga maritima [T | 100.0 | |
| d4ubpc2 | 390 | alpha-subunit of urease, catalytic domain {Bacillu | 100.0 | |
| d1v6sa_ | 390 | Phosphoglycerate kinase {Thermus thermophilus [Tax | 100.0 | |
| d1nsca_ | 390 | Influenza neuraminidase {Influenza B virus, differ | 100.0 | |
| d1qopb_ | 390 | Tryptophan synthase, beta-subunit {Salmonella typh | 100.0 | |
| d1oj7a_ | 390 | Hypothetical oxidoreductase yqhD {Escherichia coli | 100.0 | |
| d1ud2a2 | 390 | Bacterial alpha-amylase {Bacillus sp., ksm-k38 [Ta | 100.0 | |
| d1e9yb2 | 389 | alpha-subunit of urease, catalytic domain {Helicob | 100.0 | |
| d1sg6a_ | 389 | Dehydroquinate synthase, DHQS {Aspergillus nidulan | 100.0 | |
| d2gb3a1 | 389 | AAT homologue TM1698 {Thermotoga maritima [TaxId: | 100.0 | |
| d1jiha2 | 389 | DNA polymerase eta {Baker's yeast (Saccharomyces c | 100.0 | |
| d2o3ia1 | 389 | Hypothetical protein CV3147 {Chromobacterium viola | 100.0 | |
| d1f8ea_ | 388 | Influenza neuraminidase {Influenza A virus, differ | 100.0 | |
| d1u7la_ | 388 | Vacuolar ATP synthase subunit C {Baker's yeast (Sa | 100.0 | |
| d1h0ca_ | 388 | Alanine-glyoxylate aminotransferase {Human (Homo s | 100.0 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 100.0 | |
| d1qxoa_ | 388 | Chorismate synthase, AroC {Streptococcus pneumonia | 100.0 | |
| d1eepa_ | 388 | Inosine monophosphate dehydrogenase (IMPDH) {Lyme | 100.0 | |
| d2dcfa1 | 388 | 6-aminohexanoate-dimer hydrolase NylC {Flavobacter | 100.0 | |
| d2ch1a1 | 388 | 3-hydroxykynurenine transaminase {Malaria mosquito | 100.0 | |
| d1gdea_ | 388 | Aromatic aminoacid aminotransferase, AroAT {Archae | 100.0 | |
| d1q8ia1 | 388 | Exonuclease domain of family B DNA polymerases {Es | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1j32a_ | 388 | Aspartate aminotransferase, AAT {Phormidium lapide | 100.0 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 100.0 | |
| d2py5a2 | 388 | phi29 DNA polymerase {Bacteriophage phi-29 [TaxId: | 100.0 | |
| d1x38a1 | 388 | Beta-D-glucan exohydrolase, N-terminal domain {Bar | 100.0 | |
| d2ex0a1 | 387 | Alpha-2,3/2,6-sialyltransferase/sialidase {Pasteur | 100.0 | |
| d1zeea1 | 387 | Hypothetical protein SO4414 {Shewanella oneidensis | 100.0 | |
| d2aepa1 | 387 | Influenza neuraminidase {Influenza A virus, differ | 100.0 | |
| d1qvra2 | 387 | ClpB, AAA+ modules {Thermus thermophilus [TaxId: 2 | 100.0 | |
| d1ur4a_ | 387 | Beta-1,4-galactanase {Bacillus licheniformis [TaxI | 100.0 | |
| d1bxba_ | 387 | D-xylose isomerase {Thermus aquaticus, subsp. Ther | 100.0 | |
| d1zsqa2 | 387 | Myotubularin-related protein 2, C-terminal domain | 100.0 | |
| d1vefa1 | 387 | Acetylornithine/acetyl-lysine aminotransferase Arg | 100.0 | |
| d2qp8a1 | 387 | beta-secretase (memapsin) {Human (Homo sapiens) [T | 100.0 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 100.0 | |
| d1v8za1 | 386 | Tryptophan synthase, beta-subunit {Archaeon Pyroco | 100.0 | |
| d1r6ta2 | 386 | Tryptophanyl-tRNA synthetase (TrpRS) {Human (Homo | 100.0 | |
| d1muwa_ | 386 | D-xylose isomerase {Streptomyces olivochromogenes | 100.0 | |
| d3c10a1 | 386 | Histone deacetylase 7, HDAC7 {Human (Homo sapiens) | 100.0 | |
| d1v5da_ | 386 | Chitosanase {Bacillus sp., strain k17 [TaxId: 1409 | 100.0 | |
| d1ejxc2 | 385 | alpha-subunit of urease, catalytic domain {Klebsie | 100.0 | |
| d1rrma_ | 385 | Lactaldehyde reductase FucO {Escherichia coli [Tax | 100.0 | |
| d1ir6a_ | 385 | Exonuclease RecJ {Thermus thermophilus [TaxId: 274 | 100.0 | |
| d1xmxa_ | 385 | Hypothetical protein VC1899 {Vibrio cholerae [TaxI | 100.0 | |
| d1uhga_ | 385 | Ovalbumin {Hen (Gallus gallus) [TaxId: 9031]} | 100.0 | |
| d1cf3a1 | 385 | Glucose oxidase {Aspergillus niger [TaxId: 5061]} | 100.0 | |
| d1n97a_ | 385 | Cyp175a1 {Thermus thermophilus [TaxId: 274]} | 100.0 | |
| d2c5wb1 | 385 | Penicillin-binding protein 1a, transpeptidase doma | 100.0 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 100.0 | |
| d2ix0a4 | 385 | Exoribonuclease 2, RNB {Escherichia coli [TaxId: 5 | 100.0 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 100.0 | |
| d1cs1a_ | 384 | Cystathionine gamma-synthase, CGS {Escherichia col | 100.0 | |
| d3c0na2 | 384 | (Pro)aerolysin, pore-forming lobe {Aeromonas hydro | 100.0 | |
| d1mtyb_ | 384 | Methane monooxygenase hydrolase beta subunit {Meth | 100.0 | |
| d1b9ha_ | 384 | 3-amino-5-hydroxybenzoic acid synthase (AHBA synth | 100.0 | |
| d1hn0a1 | 384 | Chondroitin ABC lyase I {Proteus vulgaris [TaxId: | 100.0 | |
| d2fvka2 | 384 | Dihydropyrimidine amidohydrolase Pyd2 {Yeast (Sacc | 100.0 | |
| d1bs0a_ | 383 | PLP-dependent acyl-CoA synthase (8-amino-7-oxonano | 100.0 | |
| d1vz6a_ | 383 | Glutamate N-acetyltransferase 2 (ornithine acetylt | 100.0 | |
| d1u7ga_ | 383 | Ammonium transporter AmtB {Escherichia coli [TaxId | 100.0 | |
| d1mhyb_ | 383 | Methane monooxygenase hydrolase beta subunit {Meth | 100.0 | |
| d1bo1a_ | 383 | Phosphatidylinositol phosphate kinase IIbeta, PIPK | 100.0 | |
| d1imva_ | 383 | Pigment epithelium-derived factor, PEDF {Human (Ho | 100.0 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d2ayna1 | 383 | Ubiquitin carboxyl-terminal hydrolase 14 {Human (H | 100.0 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1t1ua1 | 382 | Choline O-acetyltransferase {Rat (Rattus norvegicu | 100.0 | |
| d2bkwa1 | 382 | Alanine-glyoxylate aminotransferase {Baker's yeast | 100.0 | |
| d1u08a_ | 382 | Putative methionine aminotransferase YdbL {Escheri | 100.0 | |
| d1ea9c3 | 382 | Maltogenic amylase, central domain {Bacillus sp., | 100.0 | |
| d1b5pa_ | 382 | Aspartate aminotransferase, AAT {Thermus thermophi | 100.0 | |
| d1wkva1 | 382 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 100.0 | |
| d1xl7a1 | 382 | Peroxisomal carnitine O-octanoyltransferase, COT { | 100.0 | |
| d1wzla3 | 382 | Maltogenic amylase, central domain {Thermoactinomy | 100.0 | |
| d1j0ha3 | 382 | Neopullulanase, central domain {Bacillus stearothe | 100.0 | |
| d2bo4a1 | 381 | Mannosylglycerate synthase, MGS {Rhodothermus mari | 100.0 | |
| d1t6ex_ | 381 | Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu | 100.0 | |
| d1by7a_ | 381 | Plasminogen activator inhibitor-2 {Human (Homo sap | 100.0 | |
| d1odza_ | 381 | Mannanase A, ManA {Pseudomonas cellulosa (Cellvibr | 100.0 | |
| d3bvua3 | 381 | Golgi alpha-mannosidase II {Fruit fly (Drosophila | 100.0 | |
| d1elua_ | 381 | Cystine C-S lyase C-des {Synechocystis sp. [TaxId: | 100.0 | |
| d1xipa_ | 381 | Nucleoporin NUP159 {Baker's yeast (Saccharomyces c | 100.0 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 100.0 | |
| d2guya2 | 381 | Fungal alpha-amylases {Aspergillus oryzae, Taka-am | 100.0 | |
| d2aaaa2 | 381 | Fungal alpha-amylases {Aspergillus niger, acid amy | 100.0 | |
| d1ibja_ | 380 | Cystathionine beta-lyase, CBL {Thale cress (Arabid | 100.0 | |
| d1vbga3 | 380 | Pyruvate phosphate dikinase, N-terminal domain {Ma | 100.0 | |
| d1q45a_ | 380 | 12-oxophytodienoate reductase (OPR, OYE homolog) { | 100.0 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 100.0 | |
| d1edga_ | 380 | Endoglucanase CelA {Clostridium cellulolyticum [Ta | 100.0 | |
| d2gmha1 | 380 | Electron transfer flavoprotein-ubiquinone oxidored | 100.0 | |
| d1elja_ | 380 | D-maltodextrin-binding protein, MBP {Archaeon Pyro | 100.0 | |
| d1lj5a_ | 379 | Plasminogen activator inhibitor-1 {Human (Homo sap | 100.0 | |
| d2f5va1 | 379 | Pyranose 2-oxidase {White-rot fungus (Peniophora s | 100.0 | |
| d3sila_ | 379 | Salmonella sialidase {Salmonella typhimurium, stra | 100.0 | |
| d1jr1a1 | 378 | Inosine monophosphate dehydrogenase (IMPDH) {Chine | 100.0 | |
| d2icya2 | 378 | UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale c | 100.0 | |
| d1xqga_ | 378 | Maspin {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1jaea2 | 378 | Animal alpha-amylase {Yellow mealworm (Tenebrio mo | 100.0 | |
| d1a59a_ | 377 | Citrate synthase {Antarctic bacterium DS2-3R [TaxI | 100.0 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 100.0 | |
| d1vjoa_ | 377 | Alanine-glyoxylate aminotransferase {Cyanobacteria | 100.0 | |
| d2d5ja1 | 377 | Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 | 100.0 | |
| d1ci9a_ | 377 | Esterase EstB {Burkholderia gladioli [TaxId: 28095 | 100.0 | |
| d2i71a1 | 377 | Hypothetical protein SSO1389 {Sulfolobus solfatari | 100.0 | |
| d1jmma_ | 377 | V-region of surface antigen I/II (SA I/II, PAC) {S | 100.0 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 100.0 | |
| d1nm8a1 | 377 | Carnitine acetyltransferase {Human (Homo sapiens) | 100.0 | |
| d1mdoa_ | 376 | Aminotransferase ArnB {Salmonella typhimurium [Tax | 100.0 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 100.0 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 100.0 | |
| d1k9oi_ | 376 | Alaserpin (serpin 1) {Tobacco hornworm (Manduca se | 100.0 | |
| d1eg5a_ | 376 | NifS-like protein/selenocysteine lyase {Thermotoga | 100.0 | |
| d2v3qa1 | 376 | PstS-like phosphate-binding protein {Human (Homo s | 100.0 | |
| d1wu4a1 | 376 | Xylanase Y {Bacillus halodurans [TaxId: 86665]} | 100.0 | |
| d1bhea_ | 376 | Polygalacturonase {Erwinia carotovora, subsp. caro | 100.0 | |
| d2fug41 | 375 | NADH-quinone oxidoreductase chain 4, Nqo4 {Thermus | 100.0 | |
| d1o4sa_ | 375 | Aspartate aminotransferase, AAT {Thermotoga mariti | 100.0 | |
| d2dula1 | 375 | N(2),N(2)-dimethylguanosine tRNA methyltransferase | 100.0 | |
| g1hle.1 | 375 | Elastase inhibitor {Horse (Equus caballus) [TaxId: | 100.0 | |
| d1kbla3 | 375 | Pyruvate phosphate dikinase, N-terminal domain {Cl | 100.0 | |
| d1ih7a1 | 375 | Exonuclease domain of family B DNA polymerases {Ba | 100.0 | |
| d1txka2 | 374 | Glucans biosynthesis protein G (MdoG, OpgG), N-ter | 100.0 | |
| d1ioma_ | 374 | Citrate synthase {Thermus thermophilus [TaxId: 274 | 100.0 | |
| d1gwja_ | 374 | Morphinone reductase {Pseudomonas putida [TaxId: 3 | 100.0 | |
| d2a0ua1 | 374 | Initiation factor 2b {Leishmania major [TaxId: 566 | 100.0 | |
| d1o69a_ | 374 | Aminotransferase homolog WlaK (PglE, Cj1121c) {Cam | 100.0 | |
| d1nd7a_ | 374 | WW domain-containing protein 1, WWP1 {Human (Homo | 100.0 | |
| d1rp4a_ | 374 | Endoplasmic oxidoreductin 1, Ero1p {Baker's yeast | 100.0 | |
| d1so7a_ | 374 | Sialidase 2 (Neu2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1kfwa1 | 374 | Psychrophilic chitinase B {Arthrobacter sp., tad20 | 100.0 | |
| d2bvca2 | 374 | Glutamine synthetase, C-terminal domain {Mycobacte | 100.0 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 100.0 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 100.0 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 100.0 | |
| d1ogmx2 | 373 | Dextranase, catalytic domain {Penicillium miniolut | 100.0 | |
| d1qo0a_ | 373 | Amide receptor/negative regulator of the amidase o | 100.0 | |
| d1miqa_ | 373 | Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo | 100.0 | |
| d1m0wa2 | 373 | Eukaryotic glutathione synthetase ATP-binding doma | 100.0 | |
| d1r5ya_ | 372 | Queosine tRNA-guanine transglycosylase {Zymomonas | 100.0 | |
| d1c3pa_ | 372 | HDAC homologue {Aquifex aeolicus [TaxId: 63363]} | 100.0 | |
| d1j58a_ | 372 | Oxalate decarboxylase OxdC (YvrK) {Bacillus subtil | 100.0 | |
| d1noya_ | 372 | Exonuclease domain of family B DNA polymerases {Ba | 100.0 | |
| d1qlpa_ | 372 | Antitrypsin, alpha-1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1vkpa_ | 372 | Agmatine iminohydrolase {Thale-cress (Arabidopsis | 100.0 | |
| g1htr.1 | 372 | Pepsin(ogen) {Human (Homo sapiens), progastricsin | 100.0 | |
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 100.0 | |
| d1mkfa_ | 371 | Viral chemokine binding protein m3 {Murid herpesvi | 100.0 | |
| d1r53a_ | 371 | Chorismate synthase, AroC {Baker's yeast (Saccharo | 100.0 | |
| d1to6a_ | 371 | Glycerate kinase GlxK {Neisseria meningitidis, (se | 100.0 | |
| d1aj8a_ | 371 | Citrate synthase {Archaeon Pyrococcus furiosus [Ta | 100.0 | |
| d1c8ba_ | 371 | Germination protease {Bacillus megaterium [TaxId: | 100.0 | |
| d1n7oa1 | 371 | Hyaluronate lyase {Streptococcus pneumoniae [TaxId | 100.0 | |
| d1f1sa1 | 371 | Hyaluronate lyase {Streptococcus agalactiae [TaxId | 100.0 | |
| d1eg1a_ | 371 | Cellobiohydrolase I (cellulase, Endoglucanase I, C | 100.0 | |
| d1r85a_ | 371 | Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d2fnua1 | 371 | Spore coat polysaccharide biosynthesis protein C { | 100.0 | |
| d2dexx3 | 370 | Peptidylarginine deiminase Pad4, catalytic C-termi | 100.0 | |
| d2hgsa4 | 370 | Eukaryotic glutathione synthetase ATP-binding doma | 100.0 | |
| d2gx8a1 | 370 | Nif3-related protein BC4286 {Bacillus cereus [TaxI | 100.0 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 100.0 | |
| d3psga_ | 370 | Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} | 100.0 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 100.0 | |
| d3coxa1 | 370 | Cholesterol oxidase of GMC family {Brevibacterium | 100.0 | |
| d1rh9a1 | 370 | Beta-mannanase {Tomato (Lycopersicon esculentum) [ | 100.0 | |
| d1iq0a2 | 370 | Arginyl-tRNA synthetase (ArgRS) {Thermus thermophi | 100.0 | |
| d1itua_ | 369 | Renal dipeptidase {Human (Homo sapiens) [TaxId: 96 | 100.0 | |
| d1rwha1 | 369 | Chondroitinase AC {Arthrobacter aurescens [TaxId: | 100.0 | |
| d2ewoa1 | 369 | Agmatine iminohydrolase {Streptococcus mutans [Tax | 100.0 | |
| d2heka1 | 369 | Hypothetical protein aq_1910 {Aquifex aeolicus [Ta | 100.0 | |
| g1ii8.1 | 369 | Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 100.0 | |
| g1as4.1 | 369 | Antichymotrypsin, alpha-1 {Human (Homo sapiens) [T | 100.0 | |
| d1ga6a_ | 369 | Serine-carboxyl proteinase, SCP {Pseudomonas sp., | 100.0 | |
| d1laxa_ | 369 | D-maltodextrin-binding protein, MBP {Escherichia c | 100.0 | |
| d1e7ua4 | 369 | Phoshoinositide 3-kinase (PI3K), catalytic domain | 100.0 | |
| d2ncda_ | 368 | Kinesin motor Ncd (non-claret disjunctional) {Frui | 100.0 | |
| d1r8ga_ | 368 | Carboxylate-amine ligase YbdK {Escherichia coli [T | 100.0 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 100.0 | |
| d2cu0a1 | 368 | Inosine monophosphate dehydrogenase (IMPDH) {Pyroc | 100.0 | |
| d1v2da_ | 368 | Glutamine aminotransferase {Thermus thermophilus [ | 100.0 | |
| d1pyya4 | 368 | Penicillin-binding protein 2x (pbp-2x), transpepti | 100.0 | |
| d1f52a2 | 368 | Glutamine synthetase, C-terminal domain {Salmonell | 100.0 | |
| d1qw9a2 | 367 | Alpha-L-arabinofuranosidase, catalytic domain {Bac | 100.0 | |
| d1ursa_ | 367 | D-maltodextrin-binding protein, MBP {Alicyclobacil | 100.0 | |
| d1n4wa1 | 367 | Cholesterol oxidase of GMC family {Streptomyces sp | 100.0 | |
| d1o7xa_ | 367 | Citrate synthase {Archaeon Sulfolobus solfataricus | 100.0 | |
| d1d3ga_ | 367 | Dihydroorotate dehydrogenase {Human (Homo sapiens) | 100.0 | |
| d1b65a_ | 367 | L-aminopeptidase D-Ala-esterase/amidase DmpA {Ochr | 100.0 | |
| d1iuqa_ | 367 | Glycerol-3-phosphate (1)-acyltransferase {Cushaw s | 100.0 | |
| d1ue8a_ | 367 | Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 11195 | 100.0 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 100.0 | |
| d1moqa_ | 366 | "Isomerase domain" of glucosamine 6-phosphate synt | 100.0 | |
| d1io7a_ | 366 | Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2 | 100.0 | |
| d1h6za1 | 366 | Pyruvate phosphate dikinase, C-terminal domain {Tr | 100.0 | |
| d2bvya2 | 366 | Mannanase A, ManA {Cellulomonas fimi [TaxId: 1708] | 100.0 | |
| d1u5ua_ | 366 | Allene oxide synthase-lipoxygenase protein, N-term | 100.0 | |
| d1jq5a_ | 366 | Glycerol dehydrogenase {Bacillus stearothermophilu | 100.0 | |
| d2aeua1 | 366 | Hypothetical protein MJ0158 {Archaeon Methanococcu | 100.0 | |
| d1fn9a_ | 365 | Outer capsid protein sigma 3 {Reovirus [TaxId: 108 | 100.0 | |
| d1w85a_ | 365 | Pyruvate dehydrogenase E1-alpha, PdhA {Bacillus st | 100.0 | |
| d1zfja1 | 365 | Inosine monophosphate dehydrogenase (IMPDH) {Strep | 100.0 | |
| d1um0a_ | 365 | Chorismate synthase, AroC {Helicobacter pylori [Ta | 100.0 | |
| d2pnwa1 | 365 | Membrane-bound lytic murein transglycosylase A, ML | 100.0 | |
| d1zkda1 | 365 | Hypothetical protein RPA4359 {Rhodopseudomonas pal | 100.0 | |
| d3c8ya1 | 365 | Fe-only hydrogenase, catalytic domain {Clostridium | 100.0 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 100.0 | |
| d1u1ha2 | 365 | 5-methyltetrahydropteroyltriglutamate--homocystein | 100.0 | |
| d1w0pa3 | 364 | Vibrio cholerae sialidase {Vibrio cholerae [TaxId: | 100.0 | |
| d1t64a_ | 364 | Histone deacetylase 8, HDAC8 {Human (Homo sapiens) | 100.0 | |
| d2jera1 | 364 | Agmatine iminohydrolase {Enterococcus faecalis [Ta | 100.0 | |
| d1um8a_ | 364 | ClpX {Helicobacter pylori [TaxId: 210]} | 100.0 | |
| d1icpa_ | 364 | 12-oxophytodienoate reductase (OPR, OYE homolog) { | 100.0 | |
| d1sdma_ | 364 | Kinesin heavy chain-like protein {Potato (Solanum | 100.0 | |
| d1kbla1 | 364 | Pyruvate phosphate dikinase, C-terminal domain {Cl | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1kq3a_ | 364 | Glycerol dehydrogenase {Thermotoga maritima [TaxId | 100.0 | |
| d1oc7a_ | 364 | Cellobiohydrolase II (Cel6) {Humicola insolens, Ce | 100.0 | |
| d1us3a2 | 364 | Xylanase 10c {Cellvibrio japonicus [TaxId: 155077] | 100.0 | |
| d2e7ja1 | 364 | Selenocysteinyl-tRNA synthase (SepSecS) {Archaeogl | 100.0 | |
| d1m7va_ | 363 | Nitric oxide (NO) synthase oxygenase domain {Bacil | 100.0 | |
| d1zaia1 | 363 | Fructose-1,6-bisphosphate aldolase {Rabbit (Orycto | 100.0 | |
| d1khba1 | 363 | Cytosolic phosphoenolpyruvate carboxykinase (GTP-h | 100.0 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 100.0 | |
| d1zq1a2 | 363 | Glutamyl-tRNA(Gln) amidotransferase subunit D, Gat | 100.0 | |
| d1cnza_ | 363 | 3-isopropylmalate dehydrogenase, IPMDH {Salmonella | 100.0 | |
| d1vyra_ | 363 | Pentaerythritol tetranirate reductase {Enterobacte | 100.0 | |
| d1nc5a_ | 363 | Hypothetical protein YteR {Bacillus subtilis [TaxI | 100.0 | |
| d1onha_ | 363 | AMPC beta-Lactamase, class C {Enterobacter cloacae | 100.0 | |
| d2a1ha1 | 363 | Branched-chain aminoacid aminotransferase {Human ( | 100.0 | |
| d1kwfa_ | 363 | CelA cellulase {Clostridium thermocellum [TaxId: 1 | 100.0 | |
| d1umga_ | 362 | ST0318 {Archaeon Sulfolobus tokodaii [TaxId: 11195 | 100.0 | |
| d1gqea_ | 362 | Polypeptide chain release factor 2 (RF2) {Escheric | 100.0 | |
| d1umda_ | 362 | Branched-chain alpha-keto acid dehydrogenase, PP m | 100.0 | |
| d3thia_ | 362 | Thiaminase I {Paenibacillus thiaminolyticus [TaxId | 100.0 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 100.0 | |
| d1pvna1 | 362 | Inosine monophosphate dehydrogenase (IMPDH) {Tritr | 100.0 | |
| d1v8ka_ | 362 | Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090 | 100.0 | |
| d1nqka_ | 362 | Alkanesulfonate monooxygenase SsuD {Escherichia co | 100.0 | |
| d1vlca_ | 362 | 3-isopropylmalate dehydrogenase, IPMDH {Thermotoga | 100.0 | |
| d1svma_ | 362 | Papillomavirus large T antigen helicase domain {Si | 100.0 | |
| d2drwa1 | 362 | D-Amino acid amidase DaaA {Ochrobactrum anthropi [ | 100.0 | |
| d2gjxa1 | 362 | beta-hexosaminidase A {Human (Homo sapiens) [TaxId | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1qjwa_ | 362 | Cellobiohydrolase II (Cel6) {Trichoderma reesei, C | 100.0 | |
| d2ozla1 | 361 | E1-beta subunit of pyruvate dehydrogenase (PP modu | 100.0 | |
| d1x1ia1 | 361 | Xanthan lyase {Bacillus sp. gl1 [TaxId: 84635]} | 100.0 | |
| d2c0ra1 | 361 | Phosphoserine aminotransferase, PSAT {Bacillus cir | 100.0 | |
| d1dhsa_ | 361 | Deoxyhypusine synthase, DHS {Human (Homo sapiens) | 100.0 | |
| d1m32a_ | 361 | 2-aminoethylphosphonate transaminase {Salmonella t | 100.0 | |
| d1lt7a_ | 361 | Betaine-homocysteine S-methyltransferase {Human (H | 100.0 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1d2fa_ | 361 | Modulator in mal gene expression, MalY {Escherichi | 100.0 | |
| d1pe9a_ | 361 | Pectate lyase {Erwinia chrysanthemi, type A [TaxId | 100.0 | |
| d1mxga2 | 361 | Bacterial alpha-amylase {Archaeon Pyrococcus woese | 100.0 | |
| d1rqga2 | 361 | Methionyl-tRNA synthetase (MetRS) {Pyrococcus abys | 100.0 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 100.0 | |
| d1sq1a_ | 360 | Chorismate synthase, AroC {Campylobacter jejuni [T | 100.0 | |
| d1qo5a_ | 360 | Fructose-1,6-bisphosphate aldolase {Human (Homo sa | 100.0 | |
| d1bjna_ | 360 | Phosphoserine aminotransferase, PSAT {Escherichia | 100.0 | |
| d1w23a_ | 360 | Phosphoserine aminotransferase, PSAT {Bacillus alc | 100.0 | |
| d1jdwa_ | 360 | L-arginine: glycine amidinotransferase {Human (Hom | 100.0 | |
| d1xfia_ | 360 | Hypothetical protein At2g17340 {Thale cress (Arabi | 100.0 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 100.0 | |
| d1oxwa_ | 360 | Patatin {Heartleaf nightshade (Solanum cardiophyll | 100.0 | |
| d1pn0a1 | 360 | Phenol hydroxylase {Soil-living yeast (Trichosporo | 100.0 | |
| d1kdga1 | 360 | Flavoprotein domain of flavocytochrome cellobiose | 100.0 | |
| d4bcla_ | 359 | Bacteriochlorophyll A protein {Prosthecochloris ae | 100.0 | |
| d1goxa_ | 359 | Glycolate oxidase {Spinach (Spinacia oleracea) [Ta | 100.0 | |
| d1o2da_ | 359 | Alcohol dehydrogenase TM0920 {Thermotoga maritima | 100.0 | |
| d1x74a1 | 359 | 2-methylacyl-CoA racemase Mcr {Mycobacterium tuber | 100.0 | |
| d1m6ex_ | 359 | Salicylic acid carboxyl methyltransferase (SAMT) { | 100.0 | |
| d1yvra1 | 359 | 60-kda SS-aARo ribonucleoprotein {African clawed f | 100.0 | |
| d2hrca1 | 359 | Ferrochelatase {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1w36d1 | 359 | Exodeoxyribonuclease V alpha chain (RecD) {Escheri | 100.0 | |
| d1idka_ | 359 | Pectin lyase {Aspergillus niger, type A [TaxId: 50 | 100.0 | |
| d1qcxa_ | 359 | Pectin lyase {Aspergillus niger, type B [TaxId: 50 | 100.0 | |
| g1lq8.1 | 358 | Protein C inhibitor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d2hdsa1 | 358 | AMPC beta-Lactamase, class C {Escherichia coli, ce | 100.0 | |
| d1m7ja3 | 358 | N-acyl-D-aminoacid amidohydrolase, catalytic domai | 100.0 | |
| d1ecea_ | 358 | Endocellulase E1 {Acidothermus cellulolyticus [Tax | 100.0 | |
| d1dosa_ | 358 | Fructose-bisphosphate aldolase (FBP aldolase) {Esc | 100.0 | |
| d1uwva2 | 358 | rRNA (Uracil-5-)-methyltransferase RumA, catalytic | 100.0 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 100.0 | |
| d1edqa2 | 358 | Chitinase A, catalytic domain {Serratia marcescens | 100.0 | |
| d2qapa1 | 357 | Fructose-1,6-bisphosphate aldolase {Trypanosome (L | 100.0 | |
| d1taza_ | 357 | Catalytic domain of cyclic nucleotide phosphodiest | 100.0 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 100.0 | |
| d1yyda1 | 357 | Fungal peroxidase (ligninase) {Basidomycetos fungu | 100.0 | |
| d1a05a_ | 357 | 3-isopropylmalate dehydrogenase, IPMDH {Thiobacill | 100.0 | |
| d1gcya2 | 357 | G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase | 100.0 | |
| d1t1ga_ | 357 | Serine-carboxyl proteinase, SCP {Bacillus novosp. | 100.0 | |
| d1mppa_ | 357 | Pepsin {Mucor pusillus [TaxId: 4840]} | 100.0 | |
| d1g01a_ | 357 | Alkaline cellulase K catalytic domain {Bacillus sp | 100.0 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 100.0 | |
| d2amxa1 | 357 | Adenosine deaminase (ADA) {Plasmodium yoelii [TaxI | 100.0 | |
| d16vpa_ | 356 | Conserved core of transcriptional regulatory prote | 100.0 | |
| d1r3sa_ | 356 | Uroporphyrinogen decarboxylase, UROD {Human (Homo | 100.0 | |
| d1lbqa_ | 356 | Ferrochelatase {Baker's yeast (Saccharomyces cerev | 100.0 | |
| d1l0wa3 | 356 | Aspartyl-tRNA synthetase (AspRS) {Thermus thermoph | 100.0 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 100.0 | |
| d1jnra2 | 356 | Adenylylsulfate reductase A subunit {Archaeon Arch | 100.0 | |
| d1v53a1 | 356 | 3-isopropylmalate dehydrogenase, IPMDH {Bacillus c | 100.0 | |
| d2ebsa2 | 356 | Oligoxyloglucan reducing end-specific cellobiohydr | 100.0 | |
| d1jaka1 | 356 | beta-N-acetylhexosaminidase {Streptomyces plicatus | 100.0 | |
| d1w8oa3 | 356 | Micromonospora sialidase, N-terminal domain {Micro | 100.0 | |
| d1vbga1 | 356 | Pyruvate phosphate dikinase, C-terminal domain {Ma | 100.0 | |
| d1goia2 | 356 | Chitinase B, catalytic domain {Serratia marcescens | 100.0 | |
| d3bu7a1 | 355 | Gentisate 1,2-dioxygenase {Silicibacter pomeroyi [ | 100.0 | |
| d1jbqa_ | 355 | Cystathionine beta-synthase {Human (Homo sapiens) | 100.0 | |
| g1mtp.1 | 355 | Thermopin {Thermobifida fusca [TaxId: 2021]} | 100.0 | |
| d1luca_ | 355 | Bacterial luciferase alpha chain, LuxA {Vibrio har | 100.0 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 100.0 | |
| d1fuia2 | 355 | L-fucose isomerase, N-terminal and second domains | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d1pcla_ | 355 | Pectate lyase {Erwinia chrysanthemi, type E [TaxId | 100.0 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 100.0 |
| >d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Glycosyltrehalose trehalohydrolase, central domain species: Deinococcus radiodurans [TaxId: 1299]
Probab=100.00 E-value=0 Score=31722.27 Aligned_cols=1 Identities=0% Similarity=-0.393 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~w~~~~~~~~~~~~~viYe~~~~~f~~~Gd~~g~~~~ldyl~~LGv~~i~L~Pv~~~~~~~~~GY~~~d~~~vdp~~G 80 (420)
T d2bhua3 1 TFDWTDADWHGIKLADCVFYEVHVGTFTPEGTYRAAAEKLPYLKELGVTAIQVMPLAAFDGQRGWGYDGAAFYAPYAPYG 80 (420)
T ss_dssp SSCCCCTTCCCCCGGGCCEEEECHHHHSSSCSHHHHHHTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECGGGC
T ss_pred CCCCCCCCCCCCCCCCCEEEEEEHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 96899989798884224899996002188999999998679999769998995998768888998888566888685659
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~d~~~lv~~aH~~gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~dlN~~np~v~~~~~~~~~~Wl~~~GVD 160 (420)
T d2bhua3 81 RPEDLMALVDAAHRLGLGVFLDVVYNHFGPSGNYLSSYAPSYFTDRFSSAWGMGLDYAEPHMRRYVTGNARMWLRDYHFD 160 (420)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSCCCSSSCCHHHHCGGGEEEEEECSSSEEECTTSHHHHHHHHHHHHHHHHHHCCS
T ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCC
T ss_conf 99999999999974054534465535667777633334443334554322345545368699999988764032014653
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 GfR~D~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (420)
T d2bhua3 161 GLRLDATPYMTDDSETHILTELAQEIHELGGTHLLLAEDHRNLPDLVTVNHLDGIWTDDFHHETRVTLTGEQEGYYAGYR 240 (420)
T ss_dssp EEEETTGGGCCCCSSSCHHHHHHHHHHTTCSCCEEEEECSSCCTHHHHTTCCSEEECTHHHHHHHHHHHCCCSGGGGGCC
T ss_pred EEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCC
T ss_conf 78873333202122310079998888764687425620357753121001125422323210444301334445312330
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~nHD~~~~~~~~~r~~~~~~~~~~~~k~a~~~ll 320 (420)
T d2bhua3 241 GGAEALAYTIRRGWRYEGQFWAVKGEEHERGHPSDALEAPNFVYCIQNHDQIGNRPLGERLHQSDGVTLHEYRGAAALLL 320 (420)
T ss_dssp CSHHHHHHHHHHSSSCEEEEECCTTCCEEEECCCTTCCGGGEEEESCCHHHHHTSTTCCCGGGSTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCHHHHHCHHHHHCCCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 26678999985144446520443153554126433455213034321566323553112356643565999999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 t~pG~P~iy~GdEig~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 400 (420)
T d2bhua3 321 TLPMTPLLFQGQEWAASTPFQFFSDHAGELGQAVSEGRKKEFGGFSGFSGEDVPDPQAEQTFLNSKLNWAEREGGEHART 400 (420)
T ss_dssp HSSSEEEEETTGGGTCSSCCCCCCCCCHHHHHHHHHHHHHHC---------CCCCTTSHHHHHTTSCCSGGGGSHHHHHH
T ss_pred HCCCCCEEECCHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHH
T ss_conf 48998798577511789986323456402203544466311367776665557886555544456678788623476899
Q ss_pred -------------------E
Q ss_conf -------------------8
Q 002647 518 -------------------G 518 (897)
Q Consensus 518 -------------------a 518 (897)
-
T Consensus 401 ~~~yr~Li~lRk~~p~l~~~ 420 (420)
T d2bhua3 401 LRLYRDLLRLRREDPVLHNR 420 (420)
T ss_dssp HHHHHHHHHHHHHCTTTTCC
T ss_pred HHHHHHHHHHHHCCHHHHCC
T ss_conf 99999999999568987575
|
| >d2df7a1 b.121.4.9 (A:11-429) Birnavirus VP2 {Infectious bursal disease virus [TaxId: 10995]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Nucleoplasmin-like/VP (viral coat and capsid proteins) superfamily: Positive stranded ssRNA viruses family: Birnaviridae-like VP domain: Birnavirus VP2 species: Infectious bursal disease virus [TaxId: 10995]
Probab=100.00 E-value=0 Score=31660.37 Aligned_cols=1 Identities=0% Similarity=-1.888 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~ylksll~PetgpasIPDD~~~rH~l~~etstyNL~~~~sGsGllv~fp~~P~s~vGaHY~~~~~~~l~FDq~l~TsQ 80 (419)
T d2df7a1 1 IVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQSNGNYKFDQMLLTAQ 80 (419)
T ss_dssp CCHHHHHHHCGGGCCCCCCSSCCCCBEEEEEEEEEEEECCTTSCEEEEECTTCSSSEEEEEEEECTTSCEEEEEEEECSS
T ss_pred CCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCEEEEEECCCCCCCCCEEEEECCCCCEEEHHHHHHHH
T ss_conf 91465554285678878971788877542033045369726885699991799875210278972788576465556667
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 dLkk~~nYgRliSr~~~i~SstLPaGvYAlnGT~Na~tf~GslSEv~~~sYn~lmS~ttN~~DKv~NvLV~~GVtVLsLP 160 (419)
T d2df7a1 81 NLPASYNYCRLVSRSLTVRSSTLPGGVYALNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLP 160 (419)
T ss_dssp CGGGTEEEEEEEEEEEEEEECCCCTTCCBCCCEEEEEEESSCGGGCSCCSTTGGGGSCSCGGGEEEEEETTTCEEEECCC
T ss_pred HHHHHHCHHHHHCEEEEEEECCCCCEEEEECCEEEEEEEECCHHHHHCCCHHHHEECCCCHHHHHCCEEECCCEEEEECC
T ss_conf 66766333321002466651357743455246154589824667600246101002126802530789823864999757
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 TgfD~pYVRLgDetP~~gl~p~~~a~ct~a~~PR~Y~I~~a~~yq~~sq~q~gGtt~Tlfs~NiDavtSlsVtGdivFq~ 240 (419)
T d2df7a1 161 TSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQSGGVTITLFSANIDAITSLSIGGELVFHT 240 (419)
T ss_dssp SCSSCCCEECCEECCCCCSCTTCCCEECCCSSCEEEEEEEEEEEEEEEECCTTCEEEEEEEEEEEESSCEEEEEEEEEEC
T ss_pred CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEE
T ss_conf 66788735647888765778765430365568733575367545547755678688898750001104267400699972
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~dati~~IG~DGt~vi~~avas~nGlt~G~dn~~pfnlviPT~eITqPITsIKLeivt~k~gg~ag~~~s~~~~ 320 (419)
T d2df7a1 241 SVHGLALDATIYLIGFDGTTVITRAVASDNGLTTGIDNLMPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSAS 320 (419)
T ss_dssp SSSSEEEEEEEEEEETTSCEEEEEEEEEEEECCTTSCEEEEEEEEECGGGCCSCEEEEEEEEEEEETTCCTTCEEEEEEE
T ss_pred CCCCCEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCC
T ss_conf 36651873799996326974788899706765356355443103236776775512789999952136754753222456
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 gs~svT~~gGN~PGvLRPvTlVAYE~vapgsilTVaGVSNyELIPNPeL~KN~~t~yG~~dP~~l~y~K~iLs~Re~L~i 400 (419)
T d2df7a1 321 GSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERERLGI 400 (419)
T ss_dssp EEEEEEETTTTSTTSSCCEEEEEEESCCTTCEEEEEEEEEEEEEECHHHHTTCCCBCCCCCTTHHHHHHHHHHTHHHHTC
T ss_pred CCEEEEECCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCEECCCHHHHHCCCCCCCCCCHHHCCHHHHHHCCHHHCCC
T ss_conf 64699965887778768658999840257746999602451324897897406332356583434288777434311486
Q ss_pred ------------------E
Q ss_conf ------------------8
Q 002647 518 ------------------G 518 (897)
Q Consensus 518 ------------------a 518 (897)
.
T Consensus 401 rtvw~~~~Y~~~~~~f~e~ 419 (419)
T d2df7a1 401 KTVWPTREYTDFREYFMEV 419 (419)
T ss_dssp CSEEEHHHHHHHHHHHHHH
T ss_pred EEEECHHHHHHHHHHHHCC
T ss_conf 3660277878999887439
|
| >d1ejda_ d.68.2.2 (A:) UDP-N-acetylglucosamine enolpyruvyl transferase (EPT, MurA, MurZ) {Enterobacter cloacae [TaxId: 550]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: IF3-like superfamily: EPT/RTPC-like family: Enolpyruvate transferase, EPT domain: UDP-N-acetylglucosamine enolpyruvyl transferase (EPT, MurA, MurZ) species: Enterobacter cloacae [TaxId: 550]
Probab=100.00 E-value=0 Score=31651.69 Aligned_cols=1 Identities=0% Similarity=-0.825 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 M~~~~i~g~~~L~G~V~ipgsKS~s~Rali~aaLa~g~s~I~n~l~s~D~~~~~~al~~LG~~I~~~~~~~I~~~~~~~~ 80 (419)
T d1ejda_ 1 MDKFRVQGPTRLQGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLKDIDTTMKLLTQLGTKVERDGSVWIDASNVNNF 80 (419)
T ss_dssp CEEEEEEECCCCEEEEECCBCHHHHHHHHHHGGGBSSCEEEESCCCCHHHHHHHHHHHHTTCEEEESSSEEEECTTCCCC
T ss_pred CCEEEEECCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCEEEECCEEEEECCCCCCC
T ss_conf 98699948890477997888389999999999984998999259901999999999997799899898799989997777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~t~~~~~~~~a~~~~~~~~l~Gd~sL~~RPm~~li~~L~~lGa~i~~~~g~~~~~i~g~l~g~~~~~~~ 160 (419)
T d1ejda_ 81 SAPYDLVKTMRASIWALGPLVARFGQGQVSLPGGCAIGARPVDLHIFGLEKLGAEIKLEEGYVKASVNGRLKGAHIVMDK 160 (419)
T ss_dssp EECHHHHTTCGGGGGGHHHHHHHHSEEEEECCCCSCCSSCTTHHHHHHHHHTTCEEEEETTEEEEECSSSCBCCEEECSS
T ss_pred CCCHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCEEEECCCCCCCCEEECCC
T ss_conf 66554540354320024425665277524666643457774267889998536169962892445337886674674587
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~Ssq~~s~llla~~~~~g~~~i~~~~~~~~i~~t~~~l~~~G~~i~~~~~~~~~i~g~~~~~~~~~~V~~D~ssAa~~~~ 240 (419)
T d1ejda_ 161 VSVGATVTIMSAATLAEGTTIIENAAREPEIVDTANFLVALGAKISGQGTDRITIEGVERLGGGVYRVLPDRIETGTFLV 240 (419)
T ss_dssp CCHHHHHHHHHHHTTSBSEEEEETCCCCHHHHHHHHHHHHTTCEEECTTSSEEEEECCSCBCCEEEECCBCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCEEEECCCCEEEEECCCCCCCCCCEEECCHHHHHHHHHH
T ss_conf 62567788984455237963542024441566677776522010011795499980542346774053570664311333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 aa~i~g~~i~i~~~~~~~~~~~~~~l~~mg~~i~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 320 (419)
T d1ejda_ 241 AAAISGGKIVCRNAQPDTLDAVLAKLREAGADIETGEDWISLDMHGKRPKAVTVRTAPHPAFPTDMQAQFTLLNLVAEGT 320 (419)
T ss_dssp HHHTTTCEEEEESCCGGGCHHHHHHHHHTTCEEEECSSEEEEECTTCCCBCCCEECCSTTSCCGGGHHHHHHHHHTSBSE
T ss_pred HHCCCCCEEECCCCCHHHHHHHHHHHHHHCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEECCC
T ss_conf 22156865521677806778898876642313997377699997676544300256632234421145541222187361
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~~~ke~dr~~~~~~eL~klG~~v~~~~d~l~I~G~~~l~g~~v~~~DHRiAMa~aia~l~~~g~~~I~~~~~i~~SyP 400 (419)
T d1ejda_ 321 GVITETIFENRFMHVPELIRMGAHAEIESNTVICHGVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRIYHIDRGYE 400 (419)
T ss_dssp EEEECCSCSSCCTHHHHHHHTTCEEEEETTEEEEECCSCCBCCEECCSSHHHHHHHHHHHHHSBEEEEECCTHHHHHHSS
T ss_pred EEEEEECCCHHHHHHHHHHHCCCEEEEECCEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHCCCCEEECCCEEEECCCH
T ss_conf 67764023438789999996889799969999997999863761613838999999999981999499836137868734
Q ss_pred ------------------E
Q ss_conf ------------------8
Q 002647 518 ------------------G 518 (897)
Q Consensus 518 ------------------a 518 (897)
-
T Consensus 401 ~F~~~l~~LGa~I~~~~~~ 419 (419)
T d1ejda_ 401 RIEDKLRALGANIERVKGE 419 (419)
T ss_dssp SHHHHHHTTTCEEEEEECC
T ss_pred HHHHHHHHCCCEEEEECCC
T ss_conf 0999999679899997179
|
| >d1om4a_ d.174.1.1 (A:) Nitric oxide (NO) synthase oxygenase domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Nitric oxide (NO) synthase oxygenase domain superfamily: Nitric oxide (NO) synthase oxygenase domain family: Nitric oxide (NO) synthase oxygenase domain domain: Nitric oxide (NO) synthase oxygenase domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=0 Score=31583.97 Aligned_cols=1 Identities=100% Similarity=0.237 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~~~kn~~~~~~~~dtlh~~~~~~~~C~~~~C~gs~m~p~~~~~~p~~~~~~e~ll~~A~~Fi~qyy~e~~~~~~~~~~ 80 (418)
T d1om4a_ 1 RFLKVKNWETDVVLTDTLHLKSTLETGCTEHICMGSIMLPSQHTRKPEDVRTKDQLFPLAKEFLDQYYSSIKRFGSKAHM 80 (418)
T ss_dssp CCEEEEBTTTCCEEEECGGGGCCSCCSCCSSCBCTTCSCC-----------CHHHHHHHHHHHHHHHHHHTTCTTSHHHH
T ss_pred CCEEEEECCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 95245540478756320434167889987564366222453457888889987899999999999999863435868999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~Rl~ev~~eI~~tGtY~~T~~EL~~GAk~AWRNs~RCIGRi~W~~L~V~D~R~v~t~~~mfeal~~Hi~~ATN~G~Ir~~ 160 (418)
T d1om4a_ 81 DRLEEVNKEIESTSTYQLKDTELIYGAKHAWRNASRCVGRIQWSKLQVFDARDCTTAHGMFNYICNHVKYATNKGNLRSA 160 (418)
T ss_dssp HHHHHHHHHHHHHSSCCCCHHHHHHHHHHHHHTCTTCTTGGGTTCCEEEECTTCCSHHHHHHHHHHHHHHHHGGGSCCCE
T ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEE
T ss_conf 99999999997455620899999887899870454233500116571565678999899999999999997079987623
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ITVFpp~~~~~~~~RIwN~QLIrYAGY~~~dGsiiGDPa~vefT~~c~~lGW~~~~t~FDvLPLviq~~g~~p~~feiP~ 240 (418)
T d1om4a_ 161 ITIFPQRTDGKHDFRVWNSQLIRYAGYKQPDGSTLGDPANVQFTEICIQQGWKAPRGRFDVLPLLLQANGNDPELFQIPP 240 (418)
T ss_dssp EEECCCCSSSSSCCEECSSBSSCBCEEECTTSCEEECGGGHHHHHHHHTTTCCCCCCTTCBCCEEEECTTCCCEEECCCG
T ss_pred EEECCCCCCCCCCCEEECHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEECCH
T ss_conf 89737988899986565488886626568998764783137999999976898999987702089997899972574887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 elvlEV~i~HP~~~wf~~LgLkWyavPaiSnM~L~iGGi~y~aaPFNGWYM~TEIgaRNl~D~~RYN~L~~VA~~mGLDT 320 (418)
T d1om4a_ 241 ELVLEVPIRHPKFDWFKDLGLKWYGLPAVSNMLLEIGGLEFSACPFSGWYMGTEIGVRDYCDNSRYNILEEVAKKMDLDM 320 (418)
T ss_dssp GGCCEEECCCSSCTTGGGGCCEEESCCCBCSCEEEETTEEESCCCEECCCBHHHHHTHHHHCTTTTCCHHHHHHHHTCCC
T ss_pred HHEEEECCCCCCCHHHHHCCCCEEECCHHCCCEEEECCEEECCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 78246435598975477559837625011365232088855346745341123365415667565664899999849788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~~sLWkDrAlvElN~AVLhSF~~~gVtIvDHHtas~~F~~~~~~E~~~~r~~pgdW~WlvPP~Sgs~tpvfH~~~~n~ 400 (418)
T d1om4a_ 321 RKTSSLWKDQALVEINIAVLYSFQSDKVTIVDHHSATESFIKHMENEYRCRGGCPADWVWIVPPMSGSITPVFHQEMLNY 400 (418)
T ss_dssp SCGGGCHHHHHHHHHHHHHHHHHHHTTCCCBCHHHHHHHHHHHHHHHHHHHSCCCCCHHHHSCSSSGGGSGGGGBCCCBC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHCC
T ss_conf 99740577889999999999899887964805278999999999999981899998852777888653441677765353
Q ss_pred -----------------E
Q ss_conf -----------------8
Q 002647 518 -----------------G 518 (897)
Q Consensus 518 -----------------a 518 (897)
-
T Consensus 401 ~l~P~f~yq~~~w~th~w 418 (418)
T d1om4a_ 401 RLTPSFEYQPDPWNTHVW 418 (418)
T ss_dssp CCSSEEECCCCGGGTCCC
T ss_pred CCCCCCCCCCCCCCCCCC
T ss_conf 147886557986446789
|
| >d2gp4a2 d.334.1.1 (A:1-418) 6-phosphogluconate dehydratase EDD {Shewanella oneidensis [TaxId: 70863]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: IlvD/EDD N-terminal domain-like superfamily: IlvD/EDD N-terminal domain-like family: lvD/EDD N-terminal domain-like domain: 6-phosphogluconate dehydratase EDD species: Shewanella oneidensis [TaxId: 70863]
Probab=100.00 E-value=0 Score=31580.74 Aligned_cols=1 Identities=100% Similarity=1.633 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~i~~vt~rI~~RS~~~r~~Yl~~i~~~~~~~~~r~~l~c~nlAh~~aa~~~~dk~~l~d~~kP~IGIvns~~d~~pc 80 (418)
T d2gp4a2 1 MHSVVQSVTDRIIARSKASREAYLAALNDARNHGVHRSSLSCGNLAHGFAACNPDDKNALRQLTKANIGIITAFNDMLSA 80 (418)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-----------------------------------------------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCCCCCC
T ss_conf 97179999999999708779999999999875488711135521777887068302556763179969998352346464
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 h~hl~~l~~~vK~gv~~~gg~~~~~~~~p~~cDGit~G~~GM~~SL~SRelIA~siE~~~~~~~~Dg~V~l~~CDK~vPG 160 (418)
T d2gp4a2 81 HQPYETYPDLLKKACQEVGSVAQVAGGVPAMCDGVTQGQPGMELSLLSREVIAMATAVGLSHNMFDGALLLGICDKIVPG 160 (418)
T ss_dssp ---------CCC---CCCCEEEEECC-BC--CCCCCCSSSGGGGHHHHHHHHHHHHHHHHTTCCCSEEEEECCSTTTTHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHH
T ss_conf 24299999999999997178663567645534651378653013130022789899998624765617997338998768
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~lMaa~r~n~lPsI~v~gGpm~~G~~~~~~~~~~~~~~~G~i~~~el~~~E~~a~p~~GtC~~mgTANTm~~l~EalGl~ 240 (418)
T d2gp4a2 161 LLIGALSFGHLPMLFVPAGPMKSGIPNKEKARIRQQFAQGKVDRAQLLEAEAQSYHSAGTCTFYGTANSNQLMLEVMGLQ 240 (418)
T ss_dssp HHHHHHTTTTSCEEECCCCC-------------------CCTHHHHHHHTTSSCHHHHHHHHHCC-----CHHHHHTTCS
T ss_pred HHHHHHHCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 99999843678779971577689746777725753032233569999999874668878663267798999999971567
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 LPGsa~vpa~~~~r~~~a~~ag~~~~~~~~~~~~~~~~~dIlt~~a~~NAi~~~~A~GGSTNavlHL~AIA~eaGi~l~l 320 (418)
T d2gp4a2 241 LPGSSFVNPDDPLREALNKMAAKQVCRLTELGTQYSPIGEVVNEKSIVNGIVALLATGGSTNLTMHIVAAARAAGIIVNW 320 (418)
T ss_dssp CTTGGGSCTTCHHHHHHHHHHHHHHHHTSTTSSSCCCHHHHSSHHHHHHHHHHHHHTTCCTHHHHHHHHHHHHTTCCCCH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHCCCCCCH
T ss_conf 52124788861899999998999999999851267897786199999711168760562675320629999654898989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~dfd~is~~~P~L~~l~P~G~~~m~d~~~AGGvp~v~k~L~~~glLh~D~~TVtG~tl~e~l~~~~~~~~~i~~~~~p~~ 400 (418)
T d2gp4a2 321 DDFSELSDAVPLLARVYPNGHADINHFHAAGGMAFLIKELLDAGLLHEDVNTVAGYGLRRYTQEPKLLDGELRWVDGPTV 400 (418)
T ss_dssp HHHHHHHTTCCBCBCCGGGSSCCHHHHHHHTHHHHHHHHHHHHTCSCCCCEETTEECGGGGGEEEEEETTEEEEEECCSS
T ss_pred HHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEECCCCCC
T ss_conf 99999857888544441598621889876069999999998788856999883886799997077766774000468777
Q ss_pred -----------------E
Q ss_conf -----------------8
Q 002647 518 -----------------G 518 (897)
Q Consensus 518 -----------------a 518 (897)
|
T Consensus 401 ~~d~~VIrp~~~P~~~~G 418 (418)
T d2gp4a2 401 SLDTEVLTSVATPFQNNG 418 (418)
T ss_dssp CSCTTTBCCSSSCSBSSC
T ss_pred CCCCCEECCCCCCCCCCC
T ss_conf 899887576555779999
|
| >d1f61a_ c.1.12.7 (A:) Isocitrate lyase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Phosphoenolpyruvate/pyruvate domain family: Phosphoenolpyruvate mutase/Isocitrate lyase-like domain: Isocitrate lyase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=0 Score=31575.01 Aligned_cols=1 Identities=0% Similarity=-1.656 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~~~w~~~pRw~~i~r~yta~dv~~lrgs~~~~~~~a~~~a~~Lr~lL~~~~~v~~~Ga~d~~~A~~~ 80 (418)
T d1f61a_ 1 ASVVGTPKSAEQIQQEWDTNPRWKDVTRTYSAEDVVALQGSVVEEHTLARRGAEVLWEQLHDLEWVNALGALTGNMAVQQ 80 (418)
T ss_dssp CCCTTCCCCHHHHHHHHHHCGGGTTCCCSSCHHHHHHTSTTCCCCCHHHHHHHHHHHHHHHHSSCEEEEBCCSHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHH
T ss_conf 98456504599999998629882778799899999986688775425789999999999836997884144778999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~kaGf~aiY~SG~~vaa~~s~s~~g~PD~gl~~~~ev~~~v~~I~~~~~~~d~~~~~~~~~~~~~~~~PIIaDaDtGfG~ 160 (418)
T d1f61a_ 81 VRAGLKAIYLSGWQVAGDANLSGHTYPDQSLYPANSVPQVVRRINNALQRADQIAKIEGDTSVENWLAPIVADGEAGFGG 160 (418)
T ss_dssp HHTTCSCEEECHHHHHHHCCTTCCCCCSSSCSCTTHHHHHHHHHHHHHHHHHHHHHHHTCCSCSCSSCCEEEECTTCSSS
T ss_pred HHHCCCEEEECHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCC
T ss_conf 98199889854276523454556886665555167899999999988788999998740466433567768753333453
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~nv~rtvk~~i~AGaAgihiEDQ~~~~KkCGH~~GK~lvp~~e~~~ki~Aa~~a~d~~~~~~~iiARTDA~~a~~i~s~ 240 (418)
T d1f61a_ 161 ALNVYELQKALIAAGVAGSHWEDQLASEKKCGHLGGKVLIPTQQHIRTLTSARLAADVADVPTVVIARTDAEAATLITSD 240 (418)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCEECCHHHHHHHHHHHHHHHHHTTCCCEEEEEECTTTCCEESCS
T ss_pred HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHCCCCCC
T ss_conf 78999999999983786899734677776556667766688999999999998766437998489997160232355333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~d~~D~~~i~g~rt~eG~y~~~~g~e~AI~Ra~aya~~gd~i~~e~~~~~~ee~~~f~~~v~~~~~~~~l~~~~sPsf~w 320 (418)
T d1f61a_ 241 VDERDQPFITGERTREGFYRTKNGIEPCIARAKAYAPFADLIWMETGTPDLEAARQFSEAVKAEYPDQMLAYNCSPSFNW 320 (418)
T ss_dssp CSTTTGGGEEEEECTTSCEEECCSHHHHHHHHHHHGGGCSEEEECCSSCCHHHHHHHHHHHHTTCTTCEEEEECCSSSCH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCCC
T ss_conf 43233444455457664001457789999999963543671885057899999999986248873332035676567770
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~~~~~~~~~~~~eL~~~Gy~~~~i~la~~~a~~~a~~~la~~~~~~Gm~ay~elQ~re~~~~~~Gy~~~khQ~~vG~~ 400 (418)
T d1f61a_ 321 KKHLDDATIAKFQKELAAMGFKFQFITLAGFHALNYSMFDLAYGYAQNQMSAYVELQEREFAAEERGYTATKHQREVGAG 400 (418)
T ss_dssp HHHSCHHHHHHHHHHHHHHTEEEEEETTHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCCTTSHHHHTTHH
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHCCC
T ss_conf 11467766543399999609629996138999999999999999986676277877658888874698556401330532
Q ss_pred -----------------E
Q ss_conf -----------------8
Q 002647 518 -----------------G 518 (897)
Q Consensus 518 -----------------a 518 (897)
-
T Consensus 401 y~D~~~~~~~~~~s~~a~ 418 (418)
T d1f61a_ 401 YFDRIATTVDPNSSTTAL 418 (418)
T ss_dssp HHHHHHHHHCTTSCCCCC
T ss_pred HHHHHHHHHCCCHHHHCC
T ss_conf 788889884787053139
|
| >d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Kynurenine--oxoglutarate transaminase I species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]
Probab=100.00 E-value=0 Score=31571.55 Aligned_cols=1 Identities=0% Similarity=1.035 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~G~Pd~~~p~~i~eal~~a~~~~~~~~~~Y~~~~G~~~lReaiA~~~~ 80 (418)
T d2r5ea1 1 KFDLPKRYQGSTKSVWVEYIQLAAQYKPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYS 80 (418)
T ss_dssp CCCCCGGGTTCCCCHHHHHHHHHHHHCCEECSSSCCSSCCCHHHHHHHHHHHTCSCGGGGSCCCTTCCHHHHHHHHHHHH
T ss_pred CCCHHHHHCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 98643464179988999999986589988716889999889999999999983899667678998788999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~g~~~~p~~~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~ 160 (418)
T d2r5ea1 81 QLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLD 160 (418)
T ss_dssp HHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEESCCSSCEEGGGEECC
T ss_pred HHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHH
T ss_conf 98599999641589917973321100222013333200122345004678987498699997214556663055666665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~i~~p~NPtG~~~s~e~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~ 240 (418)
T d2r5ea1 161 NNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIG 240 (418)
T ss_dssp HHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEE
T ss_pred HHHHHHHHHCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCHHHHCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 88776654114441241786865443331888777753442178122102102120157876531003655543145665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 S~SK~~~~pGlRiG~~~~~~~~i~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~ 320 (418)
T d2r5ea1 241 SAGKTFSLTGWKIGWAYGPEALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASF 320 (418)
T ss_dssp EHHHHTTCGGGCCEEEESCHHHHHHHHHHHTTTTCSCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 57754268876445323431133444211222333345620210122233222334453256788888988764667766
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 L~~~g~~~~~P~gg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~~~~~~~~g~~~iRis~~~~ 400 (418)
T d2r5ea1 321 LAEVGMNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFKK 400 (418)
T ss_dssp HHHTTCEEEECSBSSEEEEECGGGSTTCCGGGCCCSSHHHHHHHHHHHHHSEECBCGGGGSCGGGHHHHTTEEEEECCSC
T ss_pred HHHCCCCCCCCCCEEEEEEECCCCCCCCCCHHCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCCCCCCEEEEEECCC
T ss_conf 76428701379812499787223565111012034467899999999878999968256478877667899899995699
Q ss_pred -----------------E
Q ss_conf -----------------8
Q 002647 518 -----------------G 518 (897)
Q Consensus 518 -----------------a 518 (897)
.
T Consensus 401 ~e~l~~a~~rl~~~lg~~ 418 (418)
T d2r5ea1 401 DENLQKAAEILRKWKGSS 418 (418)
T ss_dssp HHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHCCC
T ss_conf 999999999999987359
|
| >d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Kynurenine--oxoglutarate transaminase I species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=31568.76 Aligned_cols=1 Identities=0% Similarity=0.238 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~~~r~~~~~~~~~~~~~~~~~~~dvI~l~~G~p~~~~p~~v~~a~~~al~~~~~~~~Y~~~~G~~~LReaia~~~~~~ 80 (418)
T d1w7la_ 1 QLQARRLDGIDYNPWVEFVKLASEHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGEL 80 (418)
T ss_dssp CCSCGGGTTCCCCTHHHHHHHHHTSCCEECCCCSCSSCCCHHHHHHHHHHTSSCGGGGSCCCTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 97670002799899999999747899788889889998899999999999857974468899867899999999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~g~~~~~~~~I~it~G~~~al~~~~~~l~~~g~~vlv~~p~~~~y~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~d 160 (418)
T d1w7la_ 81 LGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLD 160 (418)
T ss_dssp HTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECC---CCSEEGGGEECC
T ss_pred HCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 58998810115642585799999998622677615304556600689999749874014566542223443224575300
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~i~~~~p~NPtG~~~s~~~~~~i~~~a~~~~v~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~ 240 (418)
T d1w7la_ 161 PMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIG 240 (418)
T ss_dssp HHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEE
T ss_pred HHHHHCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCEEC
T ss_conf 55430223566531112676776564333889999999998629871155666775158989989777165445552001
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 S~SK~~~~pG~RvG~~v~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~ 320 (418)
T d1w7la_ 241 SAGKTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRS 320 (418)
T ss_dssp EHHHHTTCGGGCCEEEECCHHHHHHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHTTTSTTSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 56764268877434322320255553023322322232025677887765222333344332223102333200012345
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 L~~~g~~~~~P~gg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~~~~~~~~~~~~iRis~~~ 400 (418)
T d1w7la_ 321 LQSVGLKPLIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVK 400 (418)
T ss_dssp HHTTTCEEEECSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECCC
T ss_pred HHHCCCCCCCCCCEEEEEEECCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCCCCCCEEEEEECC
T ss_conf 66438812379820499887710002320101345553589999999997999997454426787667779979999738
Q ss_pred -----------------E
Q ss_conf -----------------8
Q 002647 518 -----------------G 518 (897)
Q Consensus 518 -----------------a 518 (897)
-
T Consensus 401 ~~~~l~~a~~rl~~~~~~ 418 (418)
T d1w7la_ 401 DEATLQAMDEKLRKWKVE 418 (418)
T ss_dssp CHHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHHHCC
T ss_conf 999999999999998667
|
| >d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: MFS general substrate transporter superfamily: MFS general substrate transporter family: LacY-like proton/sugar symporter domain: Lactose permease species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=31507.30 Aligned_cols=1 Identities=0% Similarity=-0.393 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 m~~lkn~~~~~l~~~~f~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~i~s~~~l~~~i~~~~~G~l~Dr~grr~~l~~~~ 80 (417)
T d1pv7a_ 1 MYYLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWII 80 (417)
T ss_dssp CHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCTHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 98665715899999999999999999999999999802999999999999999999999999999999817539999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (417)
T d1pv7a_ 81 TGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGI 160 (417)
T ss_dssp HHHHHTHHHHHHHTHHHHHHTTCHHHHHHTTTTGGGGGTTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 99999999988763014678889999877650122233202211222344113456777788765403554455300012
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (417)
T d1pv7a_ 161 MFTINNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFD 240 (417)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHSSCCCSCSSSCSSHHHHSCCCCCCHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 33456653211003489999999999842332102322002320233222211001222222110246688999887641
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (417)
T d1pv7a_ 241 QQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKT 320 (417)
T ss_dssp HHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
T ss_conf 22222222223333210000011222223322221024444200122210003657888886520113322111457899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~l 400 (417)
T d1pv7a_ 321 LHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTL 400 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999998798489999999999999999999999999999997989999999999999999999753
Q ss_pred ----------------E
Q ss_conf ----------------8
Q 002647 518 ----------------G 518 (897)
Q Consensus 518 ----------------a 518 (897)
+
T Consensus 401 ~~~~~~~~~r~~~~e~a 417 (417)
T d1pv7a_ 401 SGPGPLSLLRRQVNEVA 417 (417)
T ss_dssp CCSSCTTHHHHHHHHHC
T ss_pred CCCCCCCHHHHHHCCCC
T ss_conf 27785436675323379
|
| >d3bona1 d.92.1.7 (A:3-419) Botulinum neurotoxin {Clostridium botulinum, serotype A [TaxId: 1491]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Clostridium neurotoxins, catalytic domain
domain: Botulinum neurotoxin
species: Clostridium botulinum, serotype A [TaxId: 1491]
Probab=100.00 E-value=0 Score=31500.53 Aligned_cols=1 Identities=0% Similarity=-2.787 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~nnnFNyndPVnn~~Ily~~~p~~~~~~~~KAF~I~~nIWIiPER~~~~~~~~~d~~~p~~~~~~~~~yYDpnyLsTD~ 80 (417)
T d3bona1 1 FVNKQFNYKDPVNGVDIAYIKIPNVGQMQPVKAFKIHNKIWVIPERDTFTNPEEGDLNPPPEAKQVPVSYYDSTYLSTDN 80 (417)
T ss_dssp CCSCCCCTTSCCCSSSEEEEECC--CCCCCEEEEEEETTEEEEEEECCSSCTTCCSCSCC----CCSSCCCCTTTTCSHH
T ss_pred CCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCEEECCCCCCCCCCCCCCCCCCHHHCCCCCCEECCCCCCCCH
T ss_conf 96677777898899718999567788776034477426768830343567888666689701025876412753245613
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 EKD~FLk~~IKLf~RINsn~~G~~LL~~I~~aiPflG~s~~~~~~~~~~~~svni~~~~g~~~~~~~NlvIfGPgpnI~e 160 (417)
T d3bona1 81 EKDNYLKGVTKLFERIYSTDLGRMLLTSIVRGIPFWGGSTIDTELKVIDTNCINVIQPDGSYRSEELNLVIIGPSADIIQ 160 (417)
T ss_dssp HHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHCCCCCBCCSSTTEEBCCGGGEEEEECTTSCEEEEECSEEEEECCSSTTC
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCEEEECCCCCCCC
T ss_conf 78899999999999854857899999999726877789988711256641157764489854554215899889863145
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 n~~~~~~~~~~n~s~~GfGsi~~i~FsPe~~~~f~~~~~~~~~~~~~~~~F~~DPAl~L~heLIhsLh~LYGik~~~~~~ 240 (417)
T d3bona1 161 FECKSFGHEVLNLTRNGYGSTQYIRFSPDFTFGFEESLEVDTNPLLGAGKFATDPAVTLAHELIHAGHRLYGIAINPNRV 240 (417)
T ss_dssp CEEECCCCSSCCTTTSSCCCCEEEECCTTEEEEECSSHHHHTCTTSCCCCEECCHHHHHHHHHHHHHHHHTTCCCCTTCE
T ss_pred CCCEEECCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCCE
T ss_conf 54323034457733047650589997764377604533455555545343542889999999999988760756788741
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~i~~eEl~tFGG~D~~iI~~~~~~~~~~k~l~~yk~Ia~rl~kvn~~~~~~~~l~~yK~~F~~KY~ 320 (417)
T d3bona1 241 FKVNTNAYYEMSGLEVSFEELRTFGGHDAKFIDSLQENEFRLYYYNKFKDIASTLNKAKSIVGTTASLQYMKNVFKEKYL 320 (417)
T ss_dssp EECCSCHHHHHTTCEEEHHHHHHHCHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHCCEESSSSSCHHHHHHHHHHHHT
T ss_pred EECCCCCHHHHCCCCCCHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 32121122343246645777765169781105846788899999999999999987525678885236999999988744
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 l~~d~~g~~~vn~~kF~~~yk~L~~~fTe~~~a~~fkvk~Rk~Y~~~~~~~~~~nlldd~iYtI~eGFNi~~~nl~~~~~ 400 (417)
T d3bona1 321 LSEDTSGKFSVDKLKFDKLYKMLTEIYTEDNFVKFFKVLNRKTYLNFDKAVFKINIVPKVNYTIYDGFNLRNTNLAANFN 400 (417)
T ss_dssp CEECTTCCEECCHHHHHHHHHHHHHTSCHHHHHHHHTCCCCSCSSSCCCEEEECCCSSTTTCBTTTBTSCTTSTTSSTTG
T ss_pred CCCCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEECCCCCCEECCCCCCCCEECCCCCCCCCCCCCCCCC
T ss_conf 65278885895389999999999711588888766501434420000244100144676531314552146665345557
Q ss_pred ----------------E
Q ss_conf ----------------8
Q 002647 518 ----------------G 518 (897)
Q Consensus 518 ----------------a 518 (897)
-
T Consensus 401 GQN~~iN~~~~~~~~~~ 417 (417)
T d3bona1 401 GQNTEINNMNFTKLKNF 417 (417)
T ss_dssp GGBTTTTGGGCEEEEEC
T ss_pred CCCHHHCHHHHHHHCCC
T ss_conf 76522153442442069
|
| >d1q7ea_ c.123.1.1 (A:) Hypothetical protein YfdW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-transferase family III (CaiB/BaiF) superfamily: CoA-transferase family III (CaiB/BaiF) family: CoA-transferase family III (CaiB/BaiF) domain: Hypothetical protein YfdW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=31499.87 Aligned_cols=1 Identities=0% Similarity=-0.991 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 m~~PL~GirVld~~~~~agp~~~~~Lad~GAeVIkvE~p~~gd~~R~~~~~~~~~~s~~~~~~nr~K~si~lDL~~~~g~ 80 (417)
T d1q7ea_ 1 LSTPLQGIKVLDFTGVQSGPSCTQMLAWFGADVIKIERPGVGDVTRHQLRDIPDIDALYFTMLNSNKRSIELNTKTAEGK 80 (417)
T ss_dssp CCCTTTTCEEEECCCTTHHHHHHHHHHHTTCEEEEEECTTTCCGGGTTTCSSTTSCCHHHHTTCTTCEEEECCTTSHHHH
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHCCCCCCCCCCCHHHHHHCCCCEEEEEECCCHHHH
T ss_conf 99898999899847704899999999983993999898999871210488898985188897089984999769398899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~Li~~aDv~i~n~~pg~~~rlGl~~~~l~~~nP~lI~~sisgfG~~GP~~~~~~~D~~~qA~sG~~~~~g~~~~~P 160 (417)
T d1q7ea_ 81 EVMEKLIREADILVENFHPGAIDHMGFTWEHIQEINPRLIFGSIKGFDECSPYVNVKAYENVAQAAGGAASTTGFWDGPP 160 (417)
T ss_dssp HHHHHHHHHCSEEEECCCC-------CCHHHHHHHCTTCEEEEEESSCTTSTTTTSCCCHHHHHHHTTHHHHSSCTTSCC
T ss_pred HHHHHHHHCCCCCEECCCCCCHHHCCCCHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999984086407546887175528889999866878788763222454344565334543333223201126656798
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~D~~~g~~aa~ailaAL~~R~~tG~Gq~VdvSl~ea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 240 (417)
T d1q7ea_ 161 LVSAAALGDSNTGMHLLIGLLAALLHREKTGRGQRVTMSMQDAVLNLCRVKLRDQQRLDKLGYLEEYPQYPNGTFGDAVP 240 (417)
T ss_dssp CCCSSCTTTHHHHHHHHHHHHHHHHHHHHHSCCCEEEEEHHHHHHHHTHHHHHHHHHHHHHSCCTTSTTTTTSCCCSSCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 52224431679999999999999999985499739997789999986689998554320002222244344655677788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 r~~~~~~~~~p~~~~~~~~~~t~dg~i~~~~~~~~~w~~l~~~lg~~dl~~d~~~~~~~~r~~~~~~l~~~i~~~~~~~t 320 (417)
T d1q7ea_ 241 RGGNAGGGGQPGWILKCKGWETDPNAYIYFTIQEQNWENTCKAIGKPEWITDPAYSTAHARQPHIFDIFAEIEKYTVTID 320 (417)
T ss_dssp CCTTCCSSSSCEEEEECTTTTTCTTCEEEEECCGGGHHHHHHHTTCGGGGTCTTTSSHHHHGGGHHHHHHHHHHHHTTSC
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 66656888886430133015517983999732312556899985885101332000000122119999877765211333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~e~~~~l~~~~ip~~pV~~~~e~~~dpq~~~r~~~~~~~~p~~g~~~~~g~p~~~s~~~~~~~~aP~lGeht~eIL~el 400 (417)
T d1q7ea_ 321 KHEAVAYLTQFDIPCAPVLSMKEISLDPSLRQSGSVVEVEQPLRGKYLTVGCPMKFSAFTPDIKAAPLLGEHTAAVLQEL 400 (417)
T ss_dssp HHHHHHHHGGGTCCEEECCCHHHHHHCHHHHHTTSEEEEEETTTEEEEEECCSSCCSSCCCCCCCCCCTTTTHHHHHHHT
T ss_pred CCHHEEEEECCCEEEEECCCHHHHHHCHHHHHCCCEEEEECCCCCCEEEECCCEECCCCCCCCCCCCCCCCCHHHHHHHC
T ss_conf 10110123237702674488999976989897299999666998823644788604899999999999984599999986
Q ss_pred ----------------E
Q ss_conf ----------------8
Q 002647 518 ----------------G 518 (897)
Q Consensus 518 ----------------a 518 (897)
-
T Consensus 401 G~s~~~I~~L~~~gvI~ 417 (417)
T d1q7ea_ 401 GYSDDEIAAMKQNHAIE 417 (417)
T ss_dssp TCCHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHCCCCC
T ss_conf 99999999999781939
|
| >d2csga1 b.82.2.12 (A:3-419) Hypothetical protein YbiU {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Clavaminate synthase-like family: YbiU-like domain: Hypothetical protein YbiU species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=0 Score=31499.28 Aligned_cols=1 Identities=0% Similarity=-1.556 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~p~dl~~~i~~~K~~Lr~~~~~~~~~f~~l~~~i~~ev~eI~~l~~~G~~iIPeI~F~dI~~~~~~~~~~~~I 80 (417)
T d2csga1 1 TPFTHETLPADPKAAIRQMKQALRAQIGDVQAVFDRLSATIAARVAEINDLKAQGQPVWPIIPFSELAMGNISDATRAEV 80 (417)
T ss_dssp CTTCCSSCCSCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSCBCCHHHHHTTCCCHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHCCCCCHHHHHHH
T ss_conf 99876678898389999999999965678999999999999999999999996199985065589952678998999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 krrG~vVIRnV~p~e~a~~w~~~l~~Yle~n~~~~~~~~~~d~~f~~lp~~~pqiy~lyws~~q~~aR~~p~~~~~~~~l 160 (417)
T d2csga1 81 KRRGCAVIKGHFPREQALAWDQSMLDYLDKNHFDEVYKGPGDNFFGTLSASRPEIYPVYWSQAQMQARQSEEMALAQSFL 160 (417)
T ss_dssp HHHSEEEETTSSCHHHHHHHHHHHHHHHHHTTHHHHCCCCCCCTTTTSSSCCCSSCCCCCBHHHHHHHHCHHHHHHHHHH
T ss_pred HHCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHCCHHHHHHHHHH
T ss_conf 86188998887899999999999999998286420036864310012355677744242689999874495899999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~lw~~~~~~~~~~~~~~~l~y~DR~r~r~Pg~~~~~l~pH~D~Gs~erW~d~~y~~~y~~if~g~we~ydPw~~~~R~~ 240 (417)
T d2csga1 161 NRLWQVEHDGKRWFNPDISIIYPDRIRRRPPGTTSKGLGAHTDSGALERWLLPAYQQVFASVFNGNVEQYDPWNAAHRTD 240 (417)
T ss_dssp HTTSBCCSSSSCSSEEEEECCCCCCEECCCTTCCBCCEEEEECSCSTHHHHCHHHHHHTHHHHTSCGGGCCTTBCTTGGG
T ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 85202368866412577743045503137999876786755689850103563125688887558842279876423320
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~l~~~~~~cs~FR~fQGwlaLs~~~p~dGtL~v~P~~~~~ay~llrpf~~d~~~~~~~g~~pg~~~~~~~~~h~~l~ 320 (417)
T d2csga1 241 VEEYTVDNTTKCSVFRTFQGWTALSDMLPGQGLLHVVPIPEAMAYILLRPLLDDVPEDELCGVAPGRVLPISEQWHPLLM 320 (417)
T ss_dssp CCCCCCTTCCCCCSCCSEEEEEESSCBCTTSSCEEECCCGGGHHHHHHGGGSTTSCTTCCTTCCTTSCEECCTTTCHHHH
T ss_pred CHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHC
T ss_conf 00034478765414778887752366788887379963403577887240125556655677776655545633315650
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~v~ip~~~pGD~V~Wh~d~iH~v~~~~~g~~~s~V~Yi~~~P~~~~N~~yl~~qr~aF~~g~~ppdFp~~~~E~~~~g 400 (417)
T d2csga1 321 AALTSIPPLEAGDSVWWHCDVIHSVAPVENQQGWGNVMYIPAAPMCEKNLAYARKVKAALETGASPGDFPREDYETTWEG 400 (417)
T ss_dssp TTCEECCCBCTTCEEEEETTCCEEECCBSSCSSCCCEEECCBCEESHHHHHHHHHHHHHHHHTCCCTTSCSCCGGGSCSS
T ss_pred CCEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 86155245688887887078753446678999865389842788846559999999999975999877789987543356
Q ss_pred ----------------E
Q ss_conf ----------------8
Q 002647 518 ----------------G 518 (897)
Q Consensus 518 ----------------a 518 (897)
-
T Consensus 401 r~~~~~ls~~G~r~mGL 417 (417)
T d2csga1 401 RFTLRDLNIHGKRALGI 417 (417)
T ss_dssp BCCGGGCCHHHHHHTTC
T ss_pred CCCHHHCCHHHHHHCCC
T ss_conf 88946528999986289
|
| >d1ltka_ c.86.1.1 (A:) Phosphoglycerate kinase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate kinase superfamily: Phosphoglycerate kinase family: Phosphoglycerate kinase domain: Phosphoglycerate kinase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=0 Score=31497.03 Aligned_cols=1 Identities=0% Similarity=0.338 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~n~~ti~d~~d~~gK~VllRvD~NvPi~~g~i~dd~RI~~~~pTI~~l~~~~a~kvil~sH~GRP~g~~~~~~SL~ 80 (417)
T d1ltka_ 1 HHHLGNKLSISDLKDIKNKKVLVRVDFNVPIENGIIKDTNRITATLPTINHLKKEGASKIILISHCGRPDGLRNEKYTLK 80 (417)
T ss_dssp CCCSSSCCBSSSCCCCTTCEEEEEECCCCCEETTEESCTHHHHHTHHHHHHHHTTCCSEEEEECCCSCCTTSCCGGGCSH
T ss_pred CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHH
T ss_conf 97444675023111258998999943477654993896889999999999999879985999847999999889875879
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~a~~L~~~l~~~V~f~~d~~g~~~~~~i~~l~~g~IlLLENvRF~~eE~~~~~~~~~~~~~~~~~n~~~f~k~LA~laD 160 (417)
T d1ltka_ 81 PVAETLKGLLGEEVLFLNDCVGKEVEDKINAAKENSVILLENLRFHIEEEGKGVDANGNKVKANKEDVEKFQNDLTKLAD 160 (417)
T ss_dssp HHHHHHHHHHTSCCEECSCSSSHHHHHHHHSSCTTEEEECCCGGGSHHHHSEEECTTCCEEECCHHHHHHHHHHHHTSCS
T ss_pred HHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCEECCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCC
T ss_conf 99999999868465556553202245430247865378740021021012356432221000122307999999860385
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 vyVNDAF~~aHR~haS~vgi~~~~~~aG~L~ekEl~~L~~~l~~~~kP~vaIlGGaKvsdKi~vi~~L~~k~D~iiigG~ 240 (417)
T d1ltka_ 161 VFINDAFGTAHRAHSSMVGVKLNVKASGFLMKKELEYFSKALENPQRPLLAILGGAKVSDKIQLIKNLLDKVDRMIIGGG 240 (417)
T ss_dssp EEEEECTTSCSSCCHHHHCCCCSEEEECHHHHHHHHHHHHHHTSCCSSEEEEEECSCSGGGHHHHHHHHTTCSEEEEESS
T ss_pred EEEECCHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCEEEEEHH
T ss_conf 89963531231047632312120112368999999999999854566736998567744269999878865111663036
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 mantfL~~a~g~~ig~sl~e~~~~~~~~~i~~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~i~DIGp~ 320 (417)
T d1ltka_ 241 MAYTFKKVLNNMKIGTSLFDEAGSKIVGEIMEKAKAKNVQIFLPVDFKIADNFDNNANTKFVTDEEGIPDNWMGLDAGPK 320 (417)
T ss_dssp HHHHHHHHHHCCCCTTSCCCTTGGGTHHHHHHHHHHTTCEEECCSEEEEESSSSSSSCEEEEETTTCCCTTCEEEEECHH
T ss_pred HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCH
T ss_conf 67889886148766753103567899999999998639961002322430234567643312333567753444411511
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 Ti~~~~~~I~~aktI~WNGP~GvfE~~~F~~GT~~l~~~i~~~t~~~~~sivGGGdT~aai~~~g~~~~~~hvSTGGGA~ 400 (417)
T d1ltka_ 321 SIENYKDVILTSKTVIWNGPQGVFEMPNFAKGSIECLNLVVEVTKKGAITIVGGGDTASLVEQQNKKNEISHVSTGGGAS 400 (417)
T ss_dssp HHHHHHHHHHTCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHHHHTTCEEEECCSTTHHHHHHHTCGGGSSEECCCSHHH
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHCCCCCCCEEEECCHHHH
T ss_conf 12679998646877999898344446624278999999999883179979995789999999639746880897578999
Q ss_pred ----------------E
Q ss_conf ----------------8
Q 002647 518 ----------------G 518 (897)
Q Consensus 518 ----------------a 518 (897)
-
T Consensus 401 Le~L~G~~LPgieaL~~ 417 (417)
T d1ltka_ 401 LELLEGKELPGVLALSN 417 (417)
T ss_dssp HHHHTTCCCHHHHTSCC
T ss_pred HHHHCCCCCCCEECCCC
T ss_conf 99987999762001249
|
| >d1gff1_ b.121.5.1 (1:) Microvirus capsid proteins {Bacteriophage G4 [TaxId: 10843]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Nucleoplasmin-like/VP (viral coat and capsid proteins) superfamily: ssDNA viruses family: Microviridae-like VP domain: Microvirus capsid proteins species: Bacteriophage G4 [TaxId: 10843]
Probab=100.00 E-value=0 Score=31497.02 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~DlsH~~~~t~~~G~L~PI~~~eVLPGDtf~l~~~~f~Rlat~~~pvmdn~~~d~ffFfVP~RlvW~dnWekF~g~~~ 80 (417)
T d1gff1_ 1 VPHDLSHLVFEAGKIGRLKTISWTPVVAGDSFECDMVGAIRLSPLRRGLAVDSRVDIFSFYIPHRHIYGQQWINFMKDGV 80 (417)
T ss_dssp CEECCCEEEEEEECSSBCEEEEEEEECTTCEEEEEEEEEEEECCBSSSCCSCEEEEEEEEEEESHHHHTHHHHHHHHHGG
T ss_pred CCCCCCCHHHHCCCCCEEEEEEECCCCCCCEEEECHHHHHCCCCCCCHHHHHEEEEEEEEECCEEEEEHHHHHHHHCCCC
T ss_conf 98554500110455650678775142589755644123201266532211210667899852411354125899756878
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 np~~vP~vt~~~g~~~~dYlG~P~~~~~~~~~l~~rAYn~I~NewfRd~nl~ds~~v~~~dgpdd~a~y~lr~~~~~dyf 160 (417)
T d1gff1_ 81 NASPLPPVTCSSGWDSAAYLGTIPSSTLKVPKFLHQGYLNIYNNYFKPPWSDDLTYANPSNMPSEDYKWGVRVANLKSIW 160 (417)
T ss_dssp GCCCCCCEECCSSTTSSGGGSSCCCTTSEECHHHHHHHHHHHHHHTSCTTSCCCCCSSGGGSCTTTTTTCCBCBCCCCST
T ss_pred CCCCCCCEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHCCCCCCC
T ss_conf 98878706458874387618888888732102478999999997713734355335147778875102222201101310
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 Ts~LP~~~~~s~~~g~~~~s~d~~gL~~a~a~ti~~lr~a~flQr~~Ei~argG~r~~~~v~~~d~rlqr~eylggg~~~ 240 (417)
T d1gff1_ 161 TAPLPPDTRTSENMTTGTSTIDIMGLQAAYAKLHTEQERDYFMTRYRDIMKEFGGHTSYDGDNRPLLLMRSEFWASGYDV 240 (417)
T ss_dssp TSCCCTTCCSCCCCCCCSSCCCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHTTTCCCCTTTTTCCEEEEEEEEEECCEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCCC
T ss_conf 13589998877556888664470435666667899999999999999999734983554576827765214765366422
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~Tdqt~lg~~sg~g~~~~~~~v~~~~~~EHG~I~~L~~vr~~~t~~q~~~~~~~~~d~~~p~fa~Dp~l~geqP~~n~e 320 (417)
T d1gff1_ 241 DGTDQSSLGQFSGRVQQTFNHKVPRFYVPEHGVIMTLAVTRFPPTHEMEMHYLVGKENLTYTDIACDPALMANLPPREVS 320 (417)
T ss_dssp ECCSTTTTTCEEEECEEEEEEEEEEEECCSSEEEEEEEEEECCCCBTTBCCHHHHSSSCCHHHHSCCHHHHTTSCCEEEE
T ss_pred CCCCCCCHHHHCCCEEEECCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHCCCCCCCCHHHCCCHHHHCCCCCCCCC
T ss_conf 46653112331032487215633553245541899999853786101045541562001452330680110347742323
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 i~~~~~s~d~~v~Gy~~r~~~YR~~p~~V~g~f~sLd~W~~~~~~psl~~~~~v~v~~~~~D~~f~s~~~~q~~~~~~fn 400 (417)
T d1gff1_ 321 LKEFFHSSPDSAKFKIAEGQWYRTQPDRVAFPYNALDGFPFYSALPSTDLKDRVLVNTNNYDEIFQSMQLAHWNMQTKFN 400 (417)
T ss_dssp TTTTBSSCCTTCEEEECTTGGGSCCCCCCCTTTTTCTTCCSBCSCCCSSTGGGTBCCGGGGGGGBSSCSSCSEEEEEEEE
T ss_pred HHHHCCCCCCCEEECCHHHHHHHCCCHHCCCCCCCCCCCEEECCCCCCCHHHCEEECCCCCCHHHHCCCHHHHHEEEEEE
T ss_conf 54404778864014012045552472010200004564132114889984460152687503666137505500114775
Q ss_pred ----------------E
Q ss_conf ----------------8
Q 002647 518 ----------------G 518 (897)
Q Consensus 518 ----------------a 518 (897)
.
T Consensus 401 ~~v~R~mPt~~~~i~~~ 417 (417)
T d1gff1_ 401 INVYRHMPTTRDSIMTS 417 (417)
T ss_dssp EEEECCCCCHHHHSCCC
T ss_pred EEEEECCCCCCCCCCCC
T ss_conf 67860489854332469
|
| >d1w6ga1 b.30.2.1 (A:212-628) Copper amine oxidase, domain 3 {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Supersandwich superfamily: Amine oxidase catalytic domain family: Amine oxidase catalytic domain domain: Copper amine oxidase, domain 3 species: Arthrobacter globiformis [TaxId: 1665]
Probab=100.00 E-value=0 Score=31500.00 Aligned_cols=1 Identities=0% Similarity=-0.160 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 P~r~~~kp~~i~QP~G~~f~v~~g~~V~w~~W~f~~~f~~r~Gl~l~dv~~~~g~r~r~i~Y~lsl~E~~vpY~~~~p~~ 80 (417)
T d1w6ga1 1 PLRTTQKPISITQPEGPSFTVTGGNHIEWEKWSLDVGFDVREGVVLHNIAFRDGDRLRPIINRASIAEMVVPYGDPSPIR 80 (417)
T ss_dssp SCCCCCCCCCCCCTTCCSCEEETTTEEEETTEEEEEEEETTTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEBCCCCTTT
T ss_pred CCCCCCCCCEEECCCCCCEEECCCCEEEECCCEEEEEECCCCCCEEEEEEECCCCEEEEEEEEECCEEEEEECCCCCCHH
T ss_conf 98888998305689999879778988997687899970787661999999818984766899801236798788998356
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~D~ge~G~G~~a~~L~~G~DCp~~a~y~D~~~~~~~g~p~~~~naiCifE~d~G~~~rh~~~~~~~~~~~r~~~L 160 (417)
T d1w6ga1 81 SWQNYFDTGEYLVGQYANSLELGCDCLGDITYLSPVISDAFGNPREIRNGICMHEEDWGILAKHSDLWSGINYTRRNRRM 160 (417)
T ss_dssp TTCEEECCCCCCGGGGBCCCCBTTTBCSSCEEECCEEECTTSCEEECTTCEEEEEEEEEEEEEEECTTTCCEEEEEEEEE
T ss_pred HHCEEEECCCCCHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCEEECCCEEEEEECCCCCEEEEEEECCCCEEEEEEEEE
T ss_conf 21016733452633412346558999866768237872688998861653788624788227888704781368750069
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 Vvr~i~TvgNYdYi~~~~F~~dGsIe~~v~aTG~l~~~~~~~~~~~~g~~v~~~~~g~~H~H~f~~RlD~dIdG~~Nsv~ 240 (417)
T d1w6ga1 161 VISFFTTIGNYDYGFYWYLYLDGTIEFEAKATGVVFTSAFPEGGSDNISQLAPGLGAPFHQHIFSARLDMAIDGFTNRVE 240 (417)
T ss_dssp EEEEEEEETTEEEEEEEEEETTSCEEEEEEEEECCCCEECCTTCCSSEEEEETTEEEECEEEEEEEEEEECTTSSCBEEE
T ss_pred EEEEEEEEEEEEEEEEEEEECCCEEEEEEEEEEEEEEECCCCCCCCCCCEECCCCCCCCCCCEEEEEECCCCCCCCCEEE
T ss_conf 99999973202089999994696799999988999871347888986437646756555321357774355479976699
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~E~~a~~~~~~~~~r~~~vvN~~k~N~~G~~~gYkl~p~~~~~~l~~~~s~~~ 320 (417)
T d1w6ga1 241 EEDVVRQTMGPGNERGNAFSRKRTVLTRESEAVREADARTGRTWIISNPESKNRLNEPVGYKLHAHNQPTLLADPGSSIA 320 (417)
T ss_dssp EEEEEECCSBTTBTTSCCEEEEEEEECBGGGCEECCCGGGTCEEEEEEEEEECTTSCEEEEEEEECCCCCCCSCTTSHHH
T ss_pred EEEEEEECCCCCCCCCCEEEEEEEEEEEHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHH
T ss_conf 99617842797665454789999988762563220266686489998799858899944599855887764579876011
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~ra~fa~~~lwVT~y~d~E~~aag~y~nq~~~~~~l~~~~~~~e~I~~~DiV~W~t~G~~H~Pr~ED~Pvmp~~~~gf~L 400 (417)
T d1w6ga1 321 RRAAFATKDLWVTRYADDERYPTGDFVNQHSGGAGLPSYIAQDRDIDGQDIVVWHTFGLTHFPRVEDWPIMPVDTVGFKL 400 (417)
T ss_dssp HHTGGGGSSEEEEECCTTCCCTTCSCCBTCCSSSSHHHHHTTCCBCTTBCEEEEEEEEEEECCCGGGSSSEEEEEEEEEE
T ss_pred HCCHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCEEEEEEE
T ss_conf 02322106378856877662677777447789998467510899423786799995784248985447997620577999
Q ss_pred ----------------E
Q ss_conf ----------------8
Q 002647 518 ----------------G 518 (897)
Q Consensus 518 ----------------a 518 (897)
-
T Consensus 401 ~P~nFF~~nPald~p~s 417 (417)
T d1w6ga1 401 RPEGFFDRSPVLDVPAN 417 (417)
T ss_dssp EESSCSSSCTTTTCCCC
T ss_pred ECCCCCCCCCCCCCCCC
T ss_conf 87877899986678999
|
| >d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial beta-amylase species: Bacillus cereus [TaxId: 1396]
Probab=100.00 E-value=0 Score=31494.27 Aligned_cols=1 Identities=0% Similarity=-1.290 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~v~VmlPLd~v~~~~~~~~~~~~L~~LK~aGV~gV~vdVwWGivE~~~Pg~Ydws~yd~l~~mv~~~GL 80 (417)
T d1vema2 1 AVNGKGMNPDYKAYLMAPLKKIPEVTNWETFENDLRWAKQNGFYAITVDFWWGDMEKNGDQQFDFSYAQRFAQSVKNAGM 80 (417)
T ss_dssp CGGGCCCCTTCEEEEECCSSCGGGTSCHHHHHHHHHHHHHTTEEEEEEEEEHHHHTCSSTTCCCCHHHHHHHHHHHHTTC
T ss_pred CCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 98887788995389986622245667889999999999983997899933424310589983570899999999998698
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 Ki~vvmsfH~cGgnvgd~~ti~lP~Wv~e~~~~pDi~~tDr~G~r~~E~LS~~~d~t~~~~y~~~~~sF~~~f~~~~~~I 160 (417)
T d1vema2 81 KMIPIISTHQCGGNVGDDCNVPIPSWVWNQKSDDSLYFKSETGTVNKETLNPLASDVIRKEYGELYTAFAAAMKPYKDVI 160 (417)
T ss_dssp EEEEEEECSCBSSSTTCCCCBCCCGGGGGGCSSSCSSEECTTCCEECSSCCTTCHHHHHHHHHHHHHHHHHHTGGGGGGB
T ss_pred EEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 28999874235787788615688888870554888167768898883703766698701004167887999987740047
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~ei~vglGp~GELRYPsyp~~~gW~~pg~GefqCYd~~~~~~fr~wl~~ky~al~aln~aWG~~~~~~~~~~~p~~~~ff 240 (417)
T d1vema2 161 AKIYLSGGPAGELRYPSYTTSDGTGYPSRGKFQAYTEFAKSKFRLWVLNKYGSLNEVNKAWGTKLISELAILPPSDGEQF 240 (417)
T ss_dssp CCEEECCSGGGBSSCCCCCTTTTCCTTSCCCCCCCSHHHHHHHHHHHHHHHSSHHHHHHHHTCCCSSGGGCCSCSCHHHH
T ss_pred HHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 99986057420003788810015657998866578999999999999860665632235228999754576778888766
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~g~~s~YG~fFL~WYs~~L~~Hgdrvl~~A~~~F~~~~~v~l~~Kv~giHWwy~~~t~shaaElTAGydgY~~i~~~~ 320 (417)
T d1vema2 241 LMNGYLSMYGKDYLEWYQGILENHTKLIGELAHNAFDTTFQVPIGAKIAGVHWQYNNPTIPHGAEKPAGYNDYSHLLDAF 320 (417)
T ss_dssp HHTGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCEEEEECCCCTTTTCSSSTTTTHHHHTCSCHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHH
T ss_conf 67983533335589999999999999999999985189877279999465033689999874154405855779999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~r~~~~l~ftc~em~d~~~~~~~s~Pe~Lv~qv~~aa~~~gv~~~gENAl~~~d~~~~~~i~~~~~~~~~~~fTylRm~~ 400 (417)
T d1vema2 321 KSAKLDVTFTCLEMTDKGSYPEYSMPKTLVQNIATLANEKGIVLNGENALSIGNEEEYKRVAEMAFNYNFAGFTLLRYQD 400 (417)
T ss_dssp HHHTCEEEESCCSCCCCCCTTTCCCHHHHHHHHHHHHHHHTCCEEEECSSCCCSHHHHHHHHHHHHHTTCSEEEESCHHH
T ss_pred HHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCH
T ss_conf 86697598761244568899655797999999999999829936510053014867999999971127876157975656
Q ss_pred ----------------E
Q ss_conf ----------------8
Q 002647 518 ----------------G 518 (897)
Q Consensus 518 ----------------a 518 (897)
.
T Consensus 401 ~l~~~~n~~~F~~fv~~ 417 (417)
T d1vema2 401 VMYNNSLMGKFKDLLGV 417 (417)
T ss_dssp HHTCHHHHHHHHHHTSC
T ss_pred HHCCCCCHHHHHHHHCC
T ss_conf 55796428889887439
|
| >d1q2oa_ d.174.1.1 (A:) Nitric oxide (NO) synthase oxygenase domain {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Nitric oxide (NO) synthase oxygenase domain superfamily: Nitric oxide (NO) synthase oxygenase domain family: Nitric oxide (NO) synthase oxygenase domain domain: Nitric oxide (NO) synthase oxygenase domain species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=0 Score=31429.89 Aligned_cols=1 Identities=0% Similarity=-1.656 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~p~~~~~kn~~~~~~~~dtlh~~~~~~~~C~~~~C~gs~m~~~~~~~~p~~~~~~~e~ll~eA~~Fi~q~y~e~~~~~~~ 80 (416)
T d1q2oa_ 1 GPKFPRVKNWELGSITYDTLCAQSQQDGPCTPRRCLGSLVLPRKLQTRPSPGPPPAEQLLSQARDFINQYYSSIKRSGSQ 80 (416)
T ss_dssp CCSSCEEEBTTTCCEEECCGGGGCCBCCSCCSSCBCTTCSCC-----------CCHHHHHHHHHHHHHHHHHHTTCTTSH
T ss_pred CCCCEEEEECCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCH
T ss_conf 99745655404687563324442678899876733560025644466888999998999999999999999862756778
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~R~~ev~~eI~~tGtY~~T~eEL~~GAk~AWRNs~RCIGR~~W~~L~V~D~R~v~t~~~mfeal~~Hi~~ATN~G~I 160 (416)
T d1q2oa_ 81 AHEERLQEVEAEVASTGTYHLRESELVFGAKQAWRNAPRCVGRIQWGKLQVFDARDCSSAQEMFTYICNHIKYATNRGNL 160 (416)
T ss_dssp HHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHCTTCTTGGGTTCCEEEECTTCCSHHHHHHHHHHHHHHHHGGGSC
T ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999999997464620899999887899870455222300216572665678999899999999999997079987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 r~~ITVFp~~~~g~~~~RIwN~QLIrYAGY~~~dGsiiGDPa~vefT~~c~~lGW~~~~t~FDvLPLViq~~g~~p~~fe 240 (416)
T d1q2oa_ 161 RSAITVFPQRAPGRGDFRIWNSQLVRYAGYRQQDGSVRGDPANVEITELCIQHGWTPGNGRFDVLPLLLQAPDEAPELFV 240 (416)
T ss_dssp CCEEEECCCCBTTBCCCEECSSBSSCBCEEECTTSCEEECGGGHHHHHHHHHTTCCCCCSSSCBCCEEEECTTSCCEEEC
T ss_pred CEEEEECCCCCCCCCCCEEECHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEEE
T ss_conf 63389737988999986675488786626578998764684216999999976888999987710289997899972673
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 iP~elvlEV~i~HP~~~wf~~LgLkWyavPaiSnM~L~iGGi~y~aaPFNGWYM~TEIgaRnl~D~~RYN~L~~VA~~mG 320 (416)
T d1q2oa_ 241 LPPELVLEVPLEHPTLEWFAALGLRWYALPAVSNMLLEIGGLEFSAAPFSGWYMSTEIGTRDLCDPHRYNILEDVAVCMD 320 (416)
T ss_dssp CCGGGSCEEECCCSSCGGGGGGCCEEESCCEECSCEEEETTEEESCCCEECCCBHHHHHTHHHHCTTTTCCHHHHHHHTT
T ss_pred CCHHHEEEECCCCCCCCHHHHCCCCEEECCHHCCCEEEECCEEECCCCCCCCEEHHHHHHHCCCCHHHHHHHHHHHHHHC
T ss_conf 88778357346798983066638857605211255000077844245645330022355430455566666899999848
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 LDT~~~~sLWkDrAlvElN~AVLhSF~~~gVtIvDHHtas~~F~~~~~~E~~~~r~~pgdW~WlvPP~S~s~TpvfH~~~ 400 (416)
T d1q2oa_ 321 LDTRTTSSLWKDKAAVEINLAVLHSFQLAKVTIVDHHAATVSFMKHLDNEQKARGGCPADWAWIVPPISGSLTPVFHQEM 400 (416)
T ss_dssp CCTTCGGGCHHHHHHHHHHHHHHHHHHHTTCCCBCHHHHHHHHHHHHHHHHHHHSCCBCCHHHHSCSSSGGGSGGGGBCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHH
T ss_conf 78889740467789999999999899877964704068899999999999983899998852777888754541676665
Q ss_pred ---------------E
Q ss_conf ---------------8
Q 002647 518 ---------------G 518 (897)
Q Consensus 518 ---------------a 518 (897)
-
T Consensus 401 ~n~~l~P~f~yq~~~w 416 (416)
T d1q2oa_ 401 VNYILSPAFRYQPDPW 416 (416)
T ss_dssp BBCBCSSEEECCCCCC
T ss_pred HHCCCCCCCCCCCCCC
T ss_conf 5034588865589999
|
| >d1dfoa_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Serine hydroxymethyltransferase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=31427.50 Aligned_cols=1 Identities=0% Similarity=-0.560 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 l~~~~~l~~~D~ei~~~i~~e~~rq~~~i~LiaSEN~~S~~v~~a~~S~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~r 80 (416)
T d1dfoa_ 1 LKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDR 80 (416)
T ss_dssp CCTTCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHCCHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 98658845519999999999999987690586476657899999855741475658899975447773099999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 a~~lF~a~~anVqp~SGs~AN~av~~All~pGD~Il~l~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~IDyd~l~~~ 160 (416)
T d1dfoa_ 81 AKELFGADYANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEKQ 160 (416)
T ss_dssp HHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECTTTTCCGGGTCTTSHHHHHSEEEEECBCSSSSBCHHHHHHH
T ss_pred HHHHHCCCCCEEECCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHH
T ss_conf 99983998205601557557999999863898866421465433335555544467237999646687667447899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 a~~~kPklIi~G~S~y~r~~d~~~~reiad~vga~l~~D~aH~~GLIa~g~~~sP~~~aDvvt~tThKtlrGPrggiI~~ 240 (416)
T d1dfoa_ 161 AKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILA 240 (416)
T ss_dssp HHHHCCSEEEEECSSCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCCTTTSSEEEEESSSTTCCCSCEEEEE
T ss_pred HHHHCCCEEEECCCCCCCCCCHHHHHHHHHHCCCEEECCHHHHHCCEECCCCCCCCCCCCEEEEEHHHCCCCCCCEEEEE
T ss_conf 99836564873432255655879999998751715872212000003244347860000046521001046878638984
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~i~~avfPg~qggp~~~~iaa~Aval~Ea~~~~fk~Y~~qvv~NA~~La~~L~~~G~~iv~ggTdnHlvlv 320 (416)
T d1dfoa_ 241 KGGSEELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLV 320 (416)
T ss_dssp SSCCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEE
T ss_pred CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE
T ss_conf 23117689998766086534685177898988779987097889999999999999999998389443369988753688
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 dl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~d~~~~~~~SGiRiGT~a~TtrG~~e~d~~~iA~~I~~~l~~~~~~~~~~~ 400 (416)
T d1dfoa_ 321 DLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMCDVLDSINDEAVIER 400 (416)
T ss_dssp ECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTTTCHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCEEECCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 73045898999999999729688678588999988889821767789984899879999999999999972786799999
Q ss_pred ---------------E
Q ss_conf ---------------8
Q 002647 518 ---------------G 518 (897)
Q Consensus 518 ---------------a 518 (897)
+
T Consensus 401 ir~~V~~l~~~fPly~ 416 (416)
T d1dfoa_ 401 IKGKVLDICARYPVYA 416 (416)
T ss_dssp HHHHHHHHHHHSCSBC
T ss_pred HHHHHHHHHHCCCCCC
T ss_conf 9999999998089989
|
| >d1d8wa_ c.1.15.2 (A:) L-rhamnose isomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Xylose isomerase-like family: L-rhamnose isomerase domain: L-rhamnose isomerase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=31423.97 Aligned_cols=1 Identities=0% Similarity=-0.393 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 s~i~~~ye~a~e~ya~~GID~e~al~~L~~~~Is~h~WqGddv~gFe~~~g~ltGGi~~tGnyPG~aR~~~E~~~D~~~~ 80 (416)
T d1d8wa_ 1 TQLEQAWELAKQRFAAVGIDVEEALRQLDRLPVSMHCWQGDDVSGFENPEGSLTGGIQATGNYPGKARNASELRADLEQA 80 (416)
T ss_dssp CHHHHHHHHHHHHHHHTTCCHHHHHHHHTTCCEEEEGGGGTTTCCCCC--------------CSCCCCSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHH
T ss_conf 91679999999999983988999999985484443036678765534677767776021278899889989999889999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~Lipg~~~vnLH~~y~~~~~~vdrd~i~p~hf~~w~~wAk~~glglDfNpt~Fshp~~~~g~sLshpd~~iR~~wI~H~ 160 (416)
T d1d8wa_ 81 MRLIPGPKRLNLHAIYLESDTPVSRDQIKPEHFKNWVEWAKANQLGLDFNPSCFSHPLSADGFTLSHADDSIRQFWIDHC 160 (416)
T ss_dssp HHTSCSCEEEEEEGGGCCCSSCCCGGGCCGGGGHHHHHHHHHTTCEEEEECCCSSSGGGTTSCSTTCSSHHHHHHHHHHH
T ss_pred HHHCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 98568998400033320258866412258574899999999749774757655578442257762588889999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~c~~I~~~~G~~~g~~~v~niWi~DG~k~~~~d~~~~R~Rl~eSLdeI~a~~~d~~~~ld~vE~K~Fg~g~esy~vgs~ 240 (416)
T d1d8wa_ 161 KASRRVSAYFGEQLGTPSVMNIWIPDGMKDITVDRLAPRQRLLAALDEVISEKLNPAHHIDAVESKLFGIGAESYTVGSN 240 (416)
T ss_dssp HHHHHHHHHHHHHHTSCEEEEECCCCEESSCCSCSHHHHHHHHHHHHHHTCSCCCTTTEEEEEECCSCBTTBCSEESSCH
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCCEEEECCCH
T ss_conf 99999999986300776204776577676888683159999999999998715876650454230125565035763738
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 df~~~yal~~~a~~llD~GH~hPtenI~dkisalll~~~~~~lH~sr~~rwDsDhvvi~~del~~I~~ElVr~~~ld~v~ 320 (416)
T d1d8wa_ 241 EFYMGYATSRQTALCLDAGHFHPTEVISDKISAAMLYVPQLLLHVSRPVRWDSDHVVLLDDETQAIASEIVRHDLFDRVH 320 (416)
T ss_dssp HHHHHHHHHHTCEEEEETTSSCTTCCHHHHHHHHTTTSSCEEEEECBCSSSSCCBCCCSSHHHHHHHHHHHHTTGGGTEE
T ss_pred HHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCE
T ss_conf 88998763489679986798787665999999999727542576388856677612036489999999999645544422
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~LD~fdasinrI~a~v~g~rn~qka~l~ALL~p~~~L~~~q~~gD~t~rla~~Ee~K~~P~~avW~~~c~r~~vp~~~~ 400 (416)
T d1d8wa_ 321 IGLDFFDASINRIAAWVIGTRNMKKALLRALLEPTAELRKLEAPGDYTARLALLEEQKSLPWQAVWEMYCQRHDTPAGSE 400 (416)
T ss_dssp EEECCCCCSSCHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHTTTCHHHHHHHHHHHTTSCHHHHHHHHHHHTTCCCSTT
T ss_pred ECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHH
T ss_conf 30023422466199999999999999999976899999999986799999999999851981889999999739998768
Q ss_pred ---------------E
Q ss_conf ---------------8
Q 002647 518 ---------------G 518 (897)
Q Consensus 518 ---------------a 518 (897)
-
T Consensus 401 ~~~~v~~Ye~~v~~kR 416 (416)
T d1d8wa_ 401 WLESVRAYEKEILSRR 416 (416)
T ss_dssp HHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHCC
T ss_conf 8999999999885349
|
| >d1igwa_ c.1.12.7 (A:) Isocitrate lyase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Phosphoenolpyruvate/pyruvate domain family: Phosphoenolpyruvate mutase/Isocitrate lyase-like domain: Isocitrate lyase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=31420.91 Aligned_cols=1 Identities=100% Similarity=3.095 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
|
T Consensus 1 k~~~~~v~~~~~~w~~pRw~~ikR~Yta~dV~~lRgs~~~~~~~a~~~A~kL~~lL~~~~~~~~v~~lGa~d~~~A~~~~ 80 (416)
T d1igwa_ 1 KTRTQQIEELQKEWTQPRWEGITRPYSAEDVVKLRGSVNPECTLAQLGAAKMWRLLHGESKKGYINSLGALTGGQALQQA 80 (416)
T ss_dssp CCHHHHHHHHHHHTTSGGGTTCCCSSCHHHHHHTTCSCCCCCHHHHHHHHHHHHHHTTTSSSSSEEEEBCCSHHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHH
T ss_conf 96799999999986696515689998999999966985876837899999999998604445706547757799999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 kaGf~aiYvSG~~~sA~~~~~~~~~PD~gl~~~~~v~~~~~~I~~a~~~~d~~~~~~~~~~~~~~~~d~~lPIIADaDtG 160 (416)
T d1igwa_ 81 KAGIEAVYLSGWQVAADANLAASMYPDQSLYPANSVPAVVERINNTFRRADQIQWSAGIEPGDPRYVDYFLPIVADAEAG 160 (416)
T ss_dssp HHTCCCEEECHHHHHHHSCTTCCCCCSSSCSCTTHHHHHHHHHHHHHHHHHHHHHHTTCCTTCTTCCCCCCCEEEECTTC
T ss_pred HCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCC
T ss_conf 80998899646100165555678877765462889999999999988889999875200235444444310157742245
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 fG~~~nv~r~vk~~i~AGaagihiEDQ~~~~KkCGHl~gK~lv~~~e~~~ki~AA~~a~d~~~~~~~IiARTDA~~a~li 240 (416)
T d1igwa_ 161 FGGVLNAFELMKAMIEAGAAAVHFEDQLASVKKCGHMGGKVLVPTQEAIQKLVAARLCADVTGVPTLLVARTDADAADLI 240 (416)
T ss_dssp SSSHHHHHHHHHHHHHTTCSEEEEESBCGGGCCCC----CEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEE
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHH
T ss_conf 67658999999999967871897226766430100148974678999999999999877427998279986230555444
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~sd~d~~D~~fi~g~Rt~eG~yr~~~G~d~aI~R~~aya~gADli~~Et~~~~~e~a~~fa~~v~~~~p~~~l~yn~SPs 320 (416)
T d1igwa_ 241 TSDCDPYDSEFITGERTSEGFFRTHAGIEQAISRGLAYAPYADLVWCETSTPDLELARRFAQAIHAKYPGKLLAYNCSPS 320 (416)
T ss_dssp SCCCCGGGGGGEEEEECTTSCEEECCSHHHHHHHHHHHGGGCSEEEECCSSCCHHHHHHHHHHHHHHSTTCEEEEECC--
T ss_pred HCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHCCCCCCC
T ss_conf 20131115672057647343522247859999999984322667753168998999999998607876567623478887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 fnw~~~~~~~~~~~~~~eL~~lGy~~~~~~la~~ha~~~a~~~l~~~~~~~~gm~ayv~~~Q~~E~~~~~~g~~~~~hQ~ 400 (416)
T d1igwa_ 321 FNWQKNLDDKTIASFQQQLSDMGYKFQFITLAGIHSMWFNMFDLANAYAQGEGMKHYVEKVQQPEFAAAKDGYTFVSHQQ 400 (416)
T ss_dssp --------------HHHHHHHHTEEEEEETTHHHHHHHHHHHHHHHHHHHSCHHHHHHHHTHHHHHHHHTTTCCTTSHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEHHH
T ss_conf 67201235567999999999659888996768999999999999999863498899999875898887744863020886
Q ss_pred ---------------E
Q ss_conf ---------------8
Q 002647 518 ---------------G 518 (897)
Q Consensus 518 ---------------a 518 (897)
|
T Consensus 401 ~~G~~y~D~~~~~~~g 416 (416)
T d1igwa_ 401 EVGTGYFDKVTTIIQG 416 (416)
T ss_dssp HTTHHHHHHHHHHHCC
T ss_pred HHCCCHHHHHHHHHCC
T ss_conf 7542489999987169
|
| >d2vnud4 b.40.4.16 (D:495-910) Exosome complex exonuclease RRP44 {Saccharomyces cerevisiae [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: OB-fold superfamily: Nucleic acid-binding proteins family: RNB domain-like domain: Exosome complex exonuclease RRP44 species: Saccharomyces cerevisiae [TaxId: 4932]
Probab=100.00 E-value=0 Score=31419.95 Aligned_cols=1 Identities=0% Similarity=-0.925 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~Dl~~l~~~tID~~~a~d~DDAisi~~~~~g~~~l~VHIADva 80 (416)
T d2vnud4 1 FSKKVLECLPAEGHDWKAPTKLDDPEAVSKDPLLTKRKDLRDKLICSIDPPGCVDINDALHAKKLPNGNWEVGVHIADVT 80 (416)
T ss_dssp CCHHHHTTSCTTGGGCCCCSSTTCHHHHHHCGGGGGSEECTTSCCEEEESSSCCCCCEEEEEEECTTSCEEEEEEEECHH
T ss_pred CCHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCHH
T ss_conf 98789964432368643764453122115752323771177898799769999546565899995899599999983578
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~v~~~s~Ld~~A~~R~~t~Ylp~~~~pMLP~~ls~~~~SL~~~~~r~a~s~~~~~~~~g~i~~~~~~~s~I~~~~~ltY 160 (416)
T d2vnud4 81 HFVKPGTALDAEGAARGTSVYLVDKRIDMLPMLLGTDLCSLKPYVDRFAFSVIWELDDSANIVNVNFMKSVIRSREAFSY 160 (416)
T ss_dssp HHSCTTSHHHHHHHHHCBCEECSSCEECSSCHHHHTTTSSCCBTSEEEEEEEEEEECTTCCEEEEEEEEEEEEBSEEEEH
T ss_pred HHHCCCCHHHHHHHHHCEEEECCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCEEEHHHHCCCCCCCH
T ss_conf 86299998999999848037589971144788886545205698202467765540210144420332012033322321
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~ev~~~l~~~~~~~~~~~~l~~L~~~a~~l~~~R~~~g~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~s~~lVeE~Mi~A 240 (416)
T d2vnud4 161 EQAQLRIDDKTQNDELTMGMRALLKLSVKLKQKRLEAGALNLASPEVKVHMDSETSDPNEVEIKKLLATNSLVEEFMLLA 240 (416)
T ss_dssp HHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCEEEEECSSSSCEEEEEECCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCHHHHHHHHHHH
T ss_conf 66788751354321000678999999999999998568754578742799423335565431122242014078776543
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 N~~vA~~l~~~~~~~~~~R~h~~p~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~~~~~~~~ 320 (416)
T d2vnud4 241 NISVARKIYDAFPQTAMLRRHAAPPSTNFEILNEMLNTRKNMSISLESSKALADSLDRCVDPEDPYFNTLVRIMSTRCMM 320 (416)
T ss_dssp HHHHHHHHHHHCTTTCEEEEBCCCCGGGGHHHHHHHHHHHSCCCCCSCHHHHHHHHHTCCBTTBTTHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
T ss_conf 08999999984788876400079997999999999997012676865225578999987475672699999999887788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~a~~~~~~~~s~~~~~H~gLgl~~YthfTSPIRRY~DLv~hrqL~a~l~~~~~~~~~~~~e~l~~i~~~~~~~e~~a~~a 400 (416)
T d2vnud4 321 AAQYFYSGAYSYPDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYEPLSLTHRDKNKMDMICRNINRKHRNAQFA 400 (416)
T ss_dssp CCEEEEGGGSCGGGGCBTTTTBSCCCCCSCTTTBHHHHHHHHHHHHHTTSSCCCGGGGCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 87763015579976273765722015168677637899999999999737999977443999999999999999999999
Q ss_pred ---------------E
Q ss_conf ---------------8
Q 002647 518 ---------------G 518 (897)
Q Consensus 518 ---------------a 518 (897)
=
T Consensus 401 er~~~~~~~~~~lk~~ 416 (416)
T d2vnud4 401 GRASIEYYVGQVMRNN 416 (416)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHCC
T ss_conf 9999999999997578
|
| >d1pb1a_ c.77.1.1 (A:) Isocitrate dehydrogenase, ICDH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Isocitrate/Isopropylmalate dehydrogenase-like superfamily: Isocitrate/Isopropylmalate dehydrogenase-like family: Dimeric isocitrate & isopropylmalate dehydrogenases domain: Isocitrate dehydrogenase, ICDH species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=31416.96 Aligned_cols=1 Identities=0% Similarity=-1.723 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~IavipGDGIGPEV~~ealkVL~a~~~~~~~~~~~i~~~~~~~G~~~~~~~G~ 80 (416)
T d1pb1a_ 1 MESKVVVPAQGKKITLQNGKLNVPENPIIPYIEGDGIGVDVTPAMLKVVDAAVEKAYKGERKISWMEIYTGEKSTQVYGQ 80 (416)
T ss_dssp CCCCCCCCSSCBCCEEETTEEECCSSBEEEEECCSTTHHHHHHHHHHHHHHHHHHHHTTSCCCEEEEECCSHHHHHHHCT
T ss_pred CCCCCCCCCCCCEEEEECCEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHCC
T ss_conf 99752279998679977998818999889998988624999999999999999874268985589998235799998499
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~lp~~t~~~~~~~da~l~Gav~~P~~~~~~~~~l~lR~~ldlyanvRP~r~~pg~~spl~~~~~iD~vIvREnteG~Y 160 (416)
T d1pb1a_ 81 DVWLPAETLDLIREYRVAIKGPLTTPVGGGIRSLNVALRQELDLYICLRPVRYYQGTPSPVKHPELTDMVIFRENSEDIY 160 (416)
T ss_dssp TCSSCHHHHHHHHHHSEEEECCCCCCSSSCCCCHHHHHHHHTTCCEEEEEEECCTTCCCSSSCGGGCEEEEEEECSSGGG
T ss_pred CCCCCHHHHHHHHHCCEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCC
T ss_conf 77799999999985498952886699988876667889987486474132002678886434556446599861134422
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~t~~~~~Ri~r~AF~~A~~~~r~~vt~v~Kanvl~~~~gl 240 (416)
T d1pb1a_ 161 AGIEWKADSADAEKVIKFLREEMGVKKIRFPEHCGIGIKPCSEEGTKRLVRAAIEYAIANDRDSVTLVHKGNIMKFTEGA 240 (416)
T ss_dssp GCCEECTTCHHHHHHHHHHHHTSCCCCCSCCSSCCEECCCCCHHHHHHHHHHHHHHHHHTTCSEEEEEECTTTCTTTHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHH
T ss_conf 45033456520688998766530530113653036765402122228999999999996699968999789765401678
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 f~~~~~e~a~e~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~vDa~~~~lv~~P~~fdViv~~NlfGDIlSDlaa~l~Ggl 320 (416)
T d1pb1a_ 241 FKDWGYQLAREEFGGELIDGGPWLKVKNPNTGKEIVIKDVIADAFLQQILLRPAEYDVIACMNLNGDYISDALAAQVGGI 320 (416)
T ss_dssp HHHHHHHHHHHHHCCEECTTSSCEEEECTTTCCEEEEEEEEHHHHHHHHHHCGGGCCEEEECHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHCCC
T ss_conf 99999999987631223344431101046676334289999999999985210467789613578777777888862376
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 Gl~pSanig~~~a~fEp~HGSAPdiaGk~iANP~a~Ils~amML~~lg~~~~A~~i~~Av~~~l~~g~~T~Dl~~~~~~g 400 (416)
T d1pb1a_ 321 GIAPGANIGDECALFEATHGTAPKYAGQDKVNPGSIILSAEMMLRHMGWTEAADLIVKGMEGAINAKTVTYDFERLMDGA 400 (416)
T ss_dssp TTCCCEEECSSCEEEECCSCCCGGGTTSSCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTEECHHHHTTSSSC
T ss_pred CCCCCCCCCCCCEEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 65445466877248877888615547999759299999999999987997899999999999997598124300046899
Q ss_pred ---------------E
Q ss_conf ---------------8
Q 002647 518 ---------------G 518 (897)
Q Consensus 518 ---------------a 518 (897)
-
T Consensus 401 g~~~T~e~~daI~~~l 416 (416)
T d1pb1a_ 401 KLLKCSEFGDAIIENM 416 (416)
T ss_dssp EECCHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHCC
T ss_conf 7727999999999659
|
| >d1dnva_ b.121.5.3 (A:) Densovirus capsid protein {Galleria mellonella densovirus [TaxId: 37138]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Nucleoplasmin-like/VP (viral coat and capsid proteins) superfamily: ssDNA viruses family: Densovirinae-like VP domain: Densovirus capsid protein species: Galleria mellonella densovirus [TaxId: 37138]
Probab=100.00 E-value=0 Score=31347.15 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~IpRPi~~~~~~~~tyrK~HkFltfGlA~kvi~~~~t~~t~~~~~lTTsLaeiPw~~p~~YMnpsEF~lLP~Gs~v~e 80 (415)
T d1dnva_ 1 VYIIPRPFSNFGKKLSTYTKSHKFMIFGLANNVIGPTGTGTTAVNRLLTTCLAEIPWQKLPLYMNQSEFDLLPPGSRVVE 80 (415)
T ss_dssp CCCCCCCCCCCCCEECCEEEEEEEEEECCCSCCCEECSSTTTCSBEEEEEEEEECCTTBGGGTCCHHHHHTCCTTCBCCC
T ss_pred CEEECCCCCCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHEEHHHCCCCCCCEECCHHHHHHCCCCCEEEE
T ss_conf 93746676778886799965446776200121001456662023232210151160345525248878710689866889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~vkvv~rn~RiAFeTnSS~T~lATLNQnk~~~~A~GLN~~~~G~nr~~T~f~s~epMiPt~t~~~~y~~v~~~~~y~~~ 160 (415)
T d1dnva_ 81 CNVKVIFRTNRIAFETSSTVTKQATLNQISNVQTAIGLNKLGWGINRAFTAFQSDQPMIPTATTAPKYEPVTGDTGYRGM 160 (415)
T ss_dssp EEEEEEEEEEEECCCCSCTTSCCCCSCCCCEEEEESTHHHHTTCBCCCCCCCCSSSCCSCCCCCCCCSSEECSSSCEECH
T ss_pred EEEEEEEECCEEEEEECCCCCCCEECCCCCCHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 77899984670577755763101001022330110100302454213654556888745667786522355654689999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 v~~~YG~~~~n~~~~~~~~~~P~hq~g~~~~L~nYfc~~~~~~~~tgGwpcl~~hi~e~da~~~~g~~vl~~~YkPk~g~ 240 (415)
T d1dnva_ 161 IADYYGADSTNDTAFGNAGNYPHHQVSSFTFLQNYYCMYQQTNQGTGGWPCLAEHLQQFDSKTVNNQCLIDVTYKPKMGL 240 (415)
T ss_dssp HHHHHCCCSSCTTSSSSSSSCCGGGGCCEEECCCEEEECCBSSSSCCCCCCGGGGSEECCTTTTTTSBCCCCEECCSSCB
T ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCC
T ss_conf 99974766678633457777875672772110002577652046889836789998750256678857888852776432
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ik~P~~~~i~g~p~~~g~~sv~~n~~~~~~a~~~~~~~at~n~s~s~~nl~~~fp~~~~~iyt~IEKsQ~~~~G~~g~~~ 320 (415)
T d1dnva_ 241 IKSPLNYKIIGQPTVKGTISVGDNLVNMRGAVVTNPPEATQNVAESTHNLTRNFPADLFNIYSDIEKSQVLHKGPWGHEN 320 (415)
T ss_dssp CSCCCCBCCCCCTTBTTBBSCCCCCCCSCCSCEECCCCCBCSSSCBCCCCCEECCCCCCCCCSSCTTSSBSCCTTTCCCT
T ss_pred CCCCCCCCCCCCCCCCCCHHHCCCHHHCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHEECCCCCCCC
T ss_conf 46743354336655332120010044225765478255443321200204315884103023422133402126766668
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 p~iQPSlHIGv~pVPaLTTa~l~~~~~~~~n~TDt~~ywdV~~~~~V~~~~Pt~~P~~~~~nv~~~~~~y~~nl~~~~~t 400 (415)
T d1dnva_ 321 PQIQPSVHIGIQAVPALTTGALLINSSPLNSWTDSMGYIDVMSSCTVMEAQPTHFPFSTEANTNPGNTIYRINLTPNSLT 400 (415)
T ss_dssp TCCCCCCCCCCEEEEECCBCCCCSSCCSCCCBCCEEEEEEEEEEECCEECCCCCSTTCCSCCBCTTTCCCCCCCSSCSSC
T ss_pred CCCCCCEEECCEECCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCC
T ss_conf 75376246332204400113223378776762202589999988999855886544556678883303230446765556
Q ss_pred --------------E
Q ss_conf --------------8
Q 002647 518 --------------G 518 (897)
Q Consensus 518 --------------a 518 (897)
.
T Consensus 401 s~~~GlY~~~~~~~~ 415 (415)
T d1dnva_ 401 SAFNGLYGNGATLGN 415 (415)
T ss_dssp SSSCCSSSCCSSCCC
T ss_pred CCCCCEEECCHHCCC
T ss_conf 521212641110379
|
| >d1so2a_ a.211.1.2 (A:) cGMP-inhibited 3',5'-cyclic phosphodiesterase B, pde3b {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: HD-domain/PDEase-like superfamily: HD-domain/PDEase-like family: PDEase domain: cGMP-inhibited 3',5'-cyclic phosphodiesterase B, pde3b species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=31344.93 Aligned_cols=1 Identities=0% Similarity=-1.091 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~~~~~~~~~~l~~l~~W~Fd~f~l~~~~~~~~~~~L~~~~~~lf~~~gl~~~f~i~~~~l~~Fl~~v~~~Y~~nPYHN 80 (415)
T d1so2a_ 1 LDLILVEEYDSLIEKMSNWNFPIFELVEKMGEKSGRILSQVMYTLFQDTGLLEIFKIPTQQFMNYFRALENGYRDIPYHN 80 (415)
T ss_dssp CCSHHHHHHHHHHHHHTSTTCCHHHHHHHHGGGGGGHHHHHHHHHHHHTTHHHHTTCCHHHHHHHHHHHHTTSCSCSSSS
T ss_pred CCCHHHHHHHHHHHHCCCCCCCHHHCCHHHCCCCCCHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 96110688999997224689882020155212334489999999999778377529899999999999998579998827
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~HA~dV~q~~~~lL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lE~~alliAA 160 (415)
T d1so2a_ 81 RIHATDVLHAVWYLTTRPVPGLQQIHNGCGTGNETDSDGRINHGRIAYISSKSCSNPDESYGCLSSNIPALELMALYVAA 160 (415)
T ss_dssp HHHHHHHHHHHHHHTTSCEETCCCCCCC---------------CCCCCCCCTTCCCSSTTEECGGGTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHH
T ss_conf 89999999999999956554422111222233221111222332100122222333322201565408999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 l~HDvdHpG~nN~Flv~t~~pLA~lYnd~SVLEnhH~a~a~~lll~~~~~nil~~l~~~e~~~~r~lii~~ILATDm~~H 240 (415)
T d1so2a_ 161 AMHDYDHPGRTNAFLVATNAPQAVLYNDRSVLENHHAASAWNLYLSRPEYNFLLHLDHVEFKRFRFLVIEAILATDLKKH 240 (415)
T ss_dssp HHTTTTCCSCCHHHHHHTTCHHHHHTTTSSHHHHHHHHHHHHHHHTCGGGCTTTTSCHHHHHHHHHHHHHHHHTTCGGGH
T ss_pred HHHCCCCCCCCHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 97226999966889987188789985898888999999999999648542143069999999999999999970464567
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 f~~l~~f~~~~~~~~~~~~~~~~~~~r~lv~~~lik~ADIs~~~rp~~v~~~W~~~l~~EF~~QGd~E~~lglp~sp~~D 320 (415)
T d1so2a_ 241 FDFLAEFNAKANDVNSNGIEWSNENDRLLVCQVCIKLADINGPAKVRDLHLKWTEGIVNEFYEQGDEEANLGLPISPFMD 320 (415)
T ss_dssp HHHHHHHHHHHTSSSCCCCCTTCHHHHHHHHHHHHHHHHTCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCTTCC
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 99999999998740047767787888999999999998624744582889999999999999987799866999985668
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 R~~~~~~k~QigFi~~iv~PLf~~l~~a~~~~~~~~~~~~~n~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (415)
T d1so2a_ 321 RSSPQLAKLQESFITHIVGPLCNSYDAAGLLPGQWLEAEEDNDTESGDDEDGEELDTEDEEMENNLNPKPPRRKSRRRIF 400 (415)
T ss_dssp TTSCCHHHHHHHHHHHTHHHHHHHHHHTTCSCCEECC-------------------------------------CCSSEE
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHHH
T ss_conf 66564157899999998999999999983255999999998898778757664134400015554455776056677776
Q ss_pred --------------E
Q ss_conf --------------8
Q 002647 518 --------------G 518 (897)
Q Consensus 518 --------------a 518 (897)
-
T Consensus 401 ~~~~~~l~en~~~w~ 415 (415)
T d1so2a_ 401 CQLMHHLTENHKIWK 415 (415)
T ss_dssp CHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCC
T ss_conf 689999986255129
|
| >d2ieaa2 c.36.1.10 (A:56-470) Pyruvate dehydrogenase E1 component, PP module {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiamin diphosphate-binding fold (THDP-binding) superfamily: Thiamin diphosphate-binding fold (THDP-binding) family: TK-like PP module domain: Pyruvate dehydrogenase E1 component, PP module species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=31344.65 Aligned_cols=1 Identities=0% Similarity=-1.158 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~~~p~~~~~e~~~~~~iR~~~~~~v~~a~~~~~~~GGH~g~~ls~~~l~~vl~~~~~~~p~~~~~d~ 80 (415)
T d2ieaa2 1 ISNYINTIPVEEQPEYPGNLELERRIRSAIRWNAIMTVLRASKKDLELGGHMASFQSSATIYDVCFNHFFRARNEQDGGD 80 (415)
T ss_dssp CCCSSCSSCGGGCCCCCSCHHHHHHHHHHHHHHHHHHHHHHHHTCSCCCCCCHHHHHHHHHHHHHHHHTCCCCCSSSCCC
T ss_pred CCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 99853688854368999889999999999999999999982678998898254679999999999985148987688887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~ilskGHas~~lYa~l~~~g~~~~~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~a~~~~~~a~~~ 160 (415)
T d2ieaa2 81 LVYFQGHISPGVYARAFLEGRLTQEQLDNFRQEVHGNGLSSYPHPKLMPEFWQFPTVSMGLGPIGAIYQAKFLKYLEHRG 160 (415)
T ss_dssp EEECCGGGHHHHHHHHHHTTSSCHHHHTTBTCCTTSSCBCSSCCTTTSTTTCCCCCCSTTHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 79835750299999999839875035777753135789898888777888776798202157899999999987876530
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~gDg~~~eg~~~ea~~~a~~~~l~nl~~i~d~N~~~~~~~~~~~~~~~~~~~~~~~~~gw~v~~~~~~ 240 (415)
T d2ieaa2 161 LKDTSKQTVYAFLGDGEMDEPESKGAITIATREKLDNLVFVINCNLQRLDGPVTGNGKIINELEGIFEGAGWNVIKVMWG 240 (415)
T ss_dssp SCCCTTCCEEEEEETGGGGSHHHHTTHHHHHHTTCTTEEEEEEECSBCSSSBSCTTSCHHHHHHHHHHHTTCEEEEECBC
T ss_pred CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCEEECCCHHCCCCCHHHHHHHHHHCCCEEEEEECC
T ss_conf 23578842899954320023899999988887288808999967863356671014311488999998648626874031
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~d~~~al~~~~~~~v~g~~~~~~~~~ga~~~~~~~~~~~~~~~l~~~l~~~~~~~l~~dGHd~~~l~~a~~~ 320 (415)
T d2ieaa2 241 SRWDELLRKDTSGKLIQLMNETVDGDYQTFKSKDGAYVREHFFGKYPETAALVADWTDEQIWALNRGGHDPKKIYAAFKK 320 (415)
T ss_dssp GGGHHHHHHCSSCHHHHHHHHCCHHHHHHHTTSCHHHHHHHTGGGSHHHHTTSTTSCHHHHTTCCBGGGCHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 02444320102434334121033431100002441566665303421046787663131455665315740446899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ak~~~d~P~vI~a~TiKGkGlp~A~e~~n~~H~~kkl~~Ee~~~~r~rl~~pl~d~~~e~~pf~~p~~~s~e~~~l~err 400 (415)
T d2ieaa2 321 AQETKGKATVILAHTIKGYGMGDAAEGKNIAHQVKKMNMDGVRHIRDRFNVPVSDADIEKLPYITFPEGSEEHTYLHAQR 400 (415)
T ss_dssp HHHCCSSCEEEEEECCTTTTCTTCC-------------CHHHHHHHHHTTCSCCHHHHTTCCCCCCCTTSHHHHHHHHHH
T ss_pred HHHCCCCCEEEEEECCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHH
T ss_conf 98658996289973523368874334621012788899999999999839999813443179778888889999999999
Q ss_pred --------------E
Q ss_conf --------------8
Q 002647 518 --------------G 518 (897)
Q Consensus 518 --------------a 518 (897)
.
T Consensus 401 ~~Lgg~lP~r~~~~~ 415 (415)
T d2ieaa2 401 QKLHGYLPSRQPNFT 415 (415)
T ss_dssp HTTTSCSSCCCSSCC
T ss_pred HHHCCCCCCCCCCCC
T ss_conf 984898876787889
|
| >d16pka_ c.86.1.1 (A:) Phosphoglycerate kinase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate kinase superfamily: Phosphoglycerate kinase family: Phosphoglycerate kinase domain: Phosphoglycerate kinase species: Trypanosoma brucei [TaxId: 5691]
Probab=100.00 E-value=0 Score=31344.44 Aligned_cols=1 Identities=0% Similarity=-0.227 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~ktl~d~~~~~K~VlvRvD~NvPi~~g~I~d~~RI~~~~pTi~~ll~~~akvvl~SH~GRPkg~~~~~~~~~~~~~~~~ 80 (415)
T d16pka_ 1 EKKSINECDLKGKKVLIRVDFNVPVKNGKITNDYRIRSALPTLKKVLTEGGSCVLMSHLGRPKGIPMAQAGKIRSTGGVP 80 (415)
T ss_dssp CBCBGGGSCCTTCEEEEEECCCCCEETTEESCCHHHHHHHHHHHHHHHTTCEEEEECCCSCCCCBCGGGHHHHHHTTCCT
T ss_pred CCCCCCCCCCCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99741013878998999934675555995897388999999999999788979999058998987555322222223312
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~sL~~~a~~L~~~l~~~V~f~~~~~~~~~~i~~l~~g~i~LLEN~Rf~~eE~~~~~~~~~~fak~LA~laDiyVN 160 (415)
T d16pka_ 81 GFQQKATLKPVAKRLSELLLRPVTFAPDCLNAADVVSKMSPGDVVLLENVRFYKEEGSKKAKDREAMAKILASYGDVYIS 160 (415)
T ss_dssp TCCGGGCSHHHHHHHHHHHTSCCEEESCTTSCHHHHHTCCTTCEEEECCGGGBGGGGCSSHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEE
T ss_conf 36833473889999998758674234431024456650577416874200024532322122138999998722868994
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 DAFg~sHR~haS~~Gi~~~lps~~gg~L~ekEl~~L~~~l~~p~~P~~aIlGGaKisdKi~~i~~l~~k~D~iligG~~a 240 (415)
T d16pka_ 161 DAFGTAHRDSATMTGIPKILGNGAAGYLMEKEISYFAKVLGNPPRPLVAIVGGAKVSDKIQLLDNMLQRIDYLLIGGAMA 240 (415)
T ss_dssp ECGGGTTSCCTTTTHHHHHHTCCEECHHHHHHHHHHHHHHSCCCSSEEEEECSSCSGGGHHHHHHHGGGCSEEEECTTHH
T ss_pred CCCCHHHCCCCCEECCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEECCHHH
T ss_conf 56202204675122200014224678999999999999970977551899853653437999998885365565322188
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ntfL~a~G~~iG~sl~e~~~~~~a~~i~~~~~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~i~~~~~i~DIG~~Ti~~ 320 (415)
T d16pka_ 241 YTFLKAQGYSIGKSKCEESKLEFARSLLKKAEDRKVQVILPIDHVCHTEFKAVDSPLITEDQNIPEGHMALDIGPKTIEK 320 (415)
T ss_dssp HHHHHHHTCCCTTCCCCGGGHHHHHHHHHHHHHTTCEEECCSSEEEESSSSCCSSCEECSSSCCCTTCEEEEECHHHHHH
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 89999809805544304443212666522321151678511203303101334443112222234543777787776667
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~~I~~AktI~wNGP~GvfE~~~F~~GT~~l~~~ia~~t~~~~~~sivGGGdT~aai~~~g~~~~~~hvSTGGGA~L~~ 400 (415)
T d16pka_ 321 YVQTIGKCKSAIWNGPMGVFEMVPYSKGTFAIAKAMGRGTHEHGLMSIIGGGDSASAAELSGEAKRMSHVSTGGGASLEL 400 (415)
T ss_dssp HHHHHTTCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHHHHHHCCEEEECSHHHHHHHHHTTCTTTSSEECSCHHHHHHH
T ss_pred HHHHHHHHCEEEEECCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCCCCCCEEECCHHHHHHH
T ss_conf 76766513569996653213155151799999999998413479989987789999999719735870798778999999
Q ss_pred --------------E
Q ss_conf --------------8
Q 002647 518 --------------G 518 (897)
Q Consensus 518 --------------a 518 (897)
-
T Consensus 401 L~G~~LPgi~aL~~k 415 (415)
T d16pka_ 401 LEGKTLPGVTVLDDK 415 (415)
T ss_dssp HTTCCCHHHHTSCBC
T ss_pred HCCCCCCHHHHHHCC
T ss_conf 879996257785069
|
| >d1qpga_ c.86.1.1 (A:) Phosphoglycerate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate kinase superfamily: Phosphoglycerate kinase family: Phosphoglycerate kinase domain: Phosphoglycerate kinase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=31343.46 Aligned_cols=1 Identities=0% Similarity=-0.426 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~kltl~d~dl~gK~VlvRvD~NvPi~~g~I~Dd~RI~~~lpTI~~L~~~~ak~vIL~SH~GRP~g~~~~~~Sl~~va 80 (415)
T d1qpga_ 1 SLSSKLSVQDLDLKDKRVFIRVDFNVPLDGKKITSNQRIVAALPTIKYVLEHHPRYVVLASHLGQPNGERNEKYSLAPVA 80 (415)
T ss_dssp CTTSBCBGGGCCCTTCEEEEECCCCCCBSSSSBSCCHHHHHHHHHHHHHHTTCCSEEEEECCCSCCCSSCCGGGCSHHHH
T ss_pred CCCCCCCHHHCCCCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHH
T ss_conf 98666850322757998999932467643997896789999999999999879988999624899999879776869999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~L~~~l~~~V~f~~d~~g~~~~~~i~~l~~g~I~LLENvRF~~eE~~~~~~~~~~~~~~~~n~~~fak~La~laDiyVN 160 (415)
T d1qpga_ 81 KELQSLLGKDVTFLNDCVGPEVEAAVKASAPGSVILLENLRYHIEEEGSRKVDGQKVKASKEDVQKFRHELSSLADVYIN 160 (415)
T ss_dssp HHHHHHHTSCCEEESCSSSHHHHHHHHTCCTTEEEEECCGGGSHHHHTEEEETTEEEECCHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCEEEE
T ss_conf 99985319846984577776311012334467579942111143310246543011100100269999987547848996
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 DAFg~aHR~haS~~g~~~~~s~aG~lmekEl~~L~~~l~~p~rP~vaIlGGaKvsdKi~vl~~l~~k~D~iiigG~mant 240 (415)
T d1qpga_ 161 DAFGTAHRAHSSMVGFDLPQRAAGFLLEKELKYFGKALENPTRPFLAILGGAKVADKIQLIDNLLDKVDSIIIGGGMAFT 240 (415)
T ss_dssp CCGGGTTSCCHHHHCCCCSCEEECHHHHHHHHHHHHHHSSCCSSEEEEECSSCSGGGHHHHHHHTTTCSEEEECGGGHHH
T ss_pred CCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEEECHHHHH
T ss_conf 55011100565423455785633288999999999996499998599995476442899998787535557751103577
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 flk~~~g~~ig~s~~e~~~~~~~~~i~~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~i~DIG~~Ti~~ 320 (415)
T d1qpga_ 241 FKKVLENTEIGDSIFDKAGAEIVPKLMEKAKAKGVEVVLPVDFIIADAFSADANTKTVTDKEGIPAGWQGLDNGPESRKL 320 (415)
T ss_dssp HHHHHSCCCCCSCCCCHHHHHHHHHHHHHHHHHTCEEECCSEEEEESSSSSSCCCCEEETTTCCCTTCEEEEECHHHHHH
T ss_pred HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHH
T ss_conf 88760377666531122211023689999876598675512278730245555531230013558765123466046789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~~I~~a~tI~wNGP~GvfE~~~F~~GT~~i~~~ia~~~~~~~~sivGGGdT~aai~~~g~~~~~~hvSTGGGA~L~~L 400 (415)
T d1qpga_ 321 FAATVAKAKTIVWNGPPGVFEFEKFAAGTKALLDEVVKSSAAGNTVIIGGGDTATVAKKYGVTDKISHVSTGGGASLELL 400 (415)
T ss_dssp HHHHHTTCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHHHHHTCEEEECCHHHHHHHHHTTCGGGSSEECCCTHHHHHHH
T ss_pred HHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCCCCCCCCEEECCHHHHHHHH
T ss_conf 99875368679997774152465240689999999997215798299957899999997598568806967789999998
Q ss_pred --------------E
Q ss_conf --------------8
Q 002647 518 --------------G 518 (897)
Q Consensus 518 --------------a 518 (897)
-
T Consensus 401 ~G~~LPgi~aL~~~k 415 (415)
T d1qpga_ 401 EGKELPGVAFLSEKK 415 (415)
T ss_dssp TSCCCHHHHTSCBCC
T ss_pred CCCCCCHHHHHHHCC
T ss_conf 799970798885288
|
| >d2qeec1 c.1.9.8 (C:2-416) Uncharacterized protein BH0493 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Uronate isomerase-like domain: Uncharacterized protein BH0493 species: Bacillus halodurans [TaxId: 86665]
Probab=100.00 E-value=0 Score=31339.32 Aligned_cols=1 Identities=0% Similarity=-0.028 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~s~~~ia~~L~~~i~~~PIID~H~HL~p~~~~~~~f~~~~~l~~~hyyk~r~mr~~gv~e~~itg~~~~~~~~~~~~~ 80 (415)
T d2qeec1 1 SINSREVLAEKVKNAVNNQPVTDMHTHLFSPNFGEILLWDIDELLTYHYLVAEVMRWTDVSIEAFWAMSKREQADLIWEE 80 (415)
T ss_dssp CCCCHHHHHHHHHHHHHHSCEEECSCSCCCGGGGGGSBCSHHHHHTSHHHHHHHHTTCCSCHHHHHHSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHH
T ss_conf 97458999999999975898868888969778511677881888431799999998539998980789847889999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~p~~~w~~~~l~~~~~l~~~~~~~~~~~i~~~~~~~~~e~~~r~ll~~~nVe~v~tTDdP~D~L~~H~~~~~~~~ 160 (415)
T d2qeec1 81 LFIKRSPVSEACRGVLTCLQGLGLDPATRDLQVYREYFAKKTSEEQVDTVLQLANVSDVVMTNDPFDDNERISWLEGKQP 160 (415)
T ss_dssp HTTSSCCCSHHHHHHHHHHHHTTCCGGGCCHHHHHHHHHTCCHHHHHHHHHHHTTEEEEECCBCTTCHHHHHHHHTTCCC
T ss_pred HHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEECCCCCCHHHHHHHHCCCCC
T ss_conf 97428935899999888852567666767899999999762511179999998282035213797321899998604688
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~v~ptfRpD~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 240 (415)
T d2qeec1 161 DSRFHAALRLDPLLNEYEQTKHRLRDWGYKVNDEWNEGSIQEVKRFLTDWIERMDPVYMAVSLPPTFSFPEESNRGRIIR 240 (415)
T ss_dssp CTTEECCEECHHHHHCHHHHHHHHHHTTCCCCSSCSHHHHHHHHHHHHHHHHHHCCSCEEEEECTTCCSSCSSHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf 75223002479886321007899999886145644576799999999999987325688885687788677999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~l~~~~~e~g~~mQlH~Ga~Rn~n~~~~~~g~~~g~~~~~~L~~ll~~~~~~k~il~~l~~~~~~e~a~lag~f~~v~l 320 (415)
T d2qeec1 241 DCLLPVAEKHNIPFAMMIGVKKRVHPALGDAGDFVGKASMDGVEHLLREYPNNKFLVTMLSRENQHELVVLARKFSNLMI 320 (415)
T ss_dssp HTHHHHHHHHTCCEEEEECEETTSSGGGGGGGCEECCCCSHHHHHHHHHCTTSCEEEEECCGGGHHHHHHHHHHCTTEEE
T ss_pred HHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCEEE
T ss_conf 99999987569817873376667773103478775767999999999848998879996896538999999853887067
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 gg~WWf~d~~~gm~~~l~~~~e~~~~~fvg~~TDsRsf~~~~~rheyfRRil~~~L~~~v~d~v~~g~~~~~~~l~~~v~ 400 (415)
T d2qeec1 321 FGCWWFMNNPEIINEMTRMRMEMLGTSFIPQHSDARVLEQLIYKWHHSKSIIAEVLIDKYDDILQAGWEVTEEEIKRDVA 400 (415)
T ss_dssp BCCCGGGCSHHHHHHHHHHHHHHHTTCSBCCCCCCSBTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred CCCEEECCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
T ss_conf 77016636899999999999874400112254586644303378999999999999999999973689997999999999
Q ss_pred --------------E
Q ss_conf --------------8
Q 002647 518 --------------G 518 (897)
Q Consensus 518 --------------a 518 (897)
-
T Consensus 401 dI~y~Na~~yfg~~~ 415 (415)
T d2qeec1 401 DLFSRNFWRFVGRND 415 (415)
T ss_dssp HHHTHHHHHHHTCCC
T ss_pred HHHHHHHHHHHCCCC
T ss_conf 999999999828899
|
| >d1s5ja2 e.8.1.1 (A:450-864) Family B DNA polymerase {Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: DNA/RNA polymerases superfamily: DNA/RNA polymerases family: DNA polymerase I domain: Family B DNA polymerase species: Sulfolobus solfataricus [TaxId: 2287]
Probab=100.00 E-value=0 Score=31338.22 Aligned_cols=1 Identities=0% Similarity=-1.357 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~i~~~~~~~~~~~~~~iP~k~~~~~~~~~~~~~~~~~~~~y~Gg~V~~P~~G~~~~V~~lDf~SLYPSii~~~Ni~ 80 (415)
T d1s5ja2 1 EISTWVKNLYYWEHRKRNWLIPLKEEILAKSSNIRTSALIKGKGYKGAVVIDPPAGIFFNITVLDFASLYPSIIRTWNLS 80 (415)
T ss_dssp CHHHHHHHHHHHHHHHHTBCCCCHHHHHHTTCC--------------CCCCCCCSEEEEEEEEEEETTHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCHHHHHCCCCCCCCCEEECCCCCCCCCCEEEEECCCCCHHHHHHHCCC
T ss_conf 96489999999999977985789742245453201110034577387387079987657647878345339999996889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~R~~~~~~~~k~~~~~~~~~~~~d~~Q~A~Ki~~NS~ 160 (415)
T d1s5ja2 81 YETVDIQQCKKPYEVKDETGEVLHIVCMDRPGITAVITGLLRDFRVKIYKKKAKNPNNSEEQKLLYDVVQRAMKVFINAT 160 (415)
T ss_dssp TTTBSCSCCSSCCEECCSSSCCCEEBCCSSCCHHHHHHHHHHHHHHHTHHHHHTCTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 30237534578765445799745786378887427899999999987420021123442268888788999999877777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 YG~~G~~~~~~~~~~~A~~iT~~GR~~i~~~~~~~~~~g~~viygDTDSv~v~~~~~~~~e~~~~~i~~~~~~~le~e~~ 240 (415)
T d1s5ja2 161 YGVFGAETFPLYAPRVAESVTALGRYVITSTVKKAREEGLTVLYGDTDSLFLLNPPKNSLENIIKWVKTTFNLDLEVDKT 240 (415)
T ss_dssp HHHHHSTTSTTCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEETTEEEEESCCHHHHHHHHHHHHHHSSCCEEEEEE
T ss_pred HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEE
T ss_conf 77775466442328999899999999999888876605962466423314896288753999999987332212554425
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~KKrY~g~~~dgkl~~kGie~vRrd~~~~~k~~~~~vl~~il~~~~~~~~~~~~~~i~~~l~~~~~~l~~~~ 320 (415)
T d1s5ja2 241 YKFVAFSGLKKNYFGVYQDGKVDIKGMLVKKRNTPEFVKKVFNEVKELMISINSPNDVKEIKRKIVDVVKGSYEKLKNKG 320 (415)
T ss_dssp EEEEEEC----CEEEECSSSCCCEESCCC--------CCSHHHHHHHHHHTTCCSCCTTHHHHHHHHHHHHHHCTTC---
T ss_pred EEHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 51664431033203220255400110000356537889999999999997169878888878899999999999986079
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 i~~~dl~~~k~l~k~~~~Y~~~~p~hv~~A~~l~~~g~~~~~GdrI~YViv~~~~~~~p~~~~~~~~iD~~yYi~~l~~p 400 (415)
T d1s5ja2 321 YNLDELAFKVMLSKPLDAYKKNTPQHVKAALQLRPFGVNVLPRDIIYYVKVRSKDGVKPVQLAKVTEIDAEKYLEALRST 400 (415)
T ss_dssp -------------------------------------------------------------------CCSSTTHHHHHTT
T ss_pred CCHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 78688202320146734311799389999999985599999989899999947999882220357998889999999999
Q ss_pred --------------E
Q ss_conf --------------8
Q 002647 518 --------------G 518 (897)
Q Consensus 518 --------------a 518 (897)
.
T Consensus 401 l~~il~~~g~~~~el 415 (415)
T d1s5ja2 401 FEQILRAFGVSWDEI 415 (415)
T ss_dssp STTHHHHHSCCCCCC
T ss_pred HHHHHHHHCCCHHHC
T ss_conf 999998628994439
|
| >d1kbia1 c.1.4.1 (A:98-511) Flavocytochrome b2, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: FMN-linked oxidoreductases family: FMN-linked oxidoreductases domain: Flavocytochrome b2, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=31272.44 Aligned_cols=1 Identities=0% Similarity=-0.028 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~A~~~lp~~~~~y~~~ga~~e~t~~~N~~aFd~i~l~Pr~L~dvs~i 80 (414)
T d1kbia1 1 APGETKEDIARKEQLKSLLPPLDNIINLYDFEYLASQTLTKQAWAYYSSGANDEVTHRENHNAYHRIFFKPKILVDVRKV 80 (414)
T ss_dssp CTTCCHHHHHHHHHHHHTCCCGGGCCSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGCEECCCCSCCCSSC
T ss_pred CCCCCHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHCEEECCCCCCCCCC
T ss_conf 99885444556777631599812167999999999986888888887146665099999999997360665335787678
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 Dlst~~lG~~l~~P~~Isp~g~~~~~~~~~~~~~~A~a~aa~~~~~~~~ls~~~~~~~~~~~~~a~~~~~~~~~q~y~~~ 160 (414)
T d1kbia1 81 DISTDMLGSHVDVPFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWYQLYVNS 160 (414)
T ss_dssp BCCEEETTEEESSSEEECCCSCGGGTCTTTTHHHHHHHHHSSSSCCCEEECTTCSSCHHHHHHTCCCSSCCEEEEECCCS
T ss_pred CCCEEECCCCCCCCEEECHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHCCCCCC
T ss_conf 88534898417888788745640456822367887764777641365322322346568899872177541011021124
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~l~~ra~~ag~~al~~tvD~~~~g~re~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~~i~~ 240 (414)
T d1kbia1 161 DRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKFIDPSLTWKDIEE 240 (414)
T ss_dssp SHHHHHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGCBTTBCTTCCHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHH
T ss_conf 58889999999987188510123344324651787872556654331444203554553277899985066899999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 i~~~~~~~~i~kgi~~~~da~~~~~~G~~~i~vsnhggr~~d~~~~~~~~l~~i~~~~~~~~v~~~~~viadGGIR~G~D 320 (414)
T d1kbia1 241 LKKKTKLPIVIKGVQRTEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTD 320 (414)
T ss_dssp HHHHCSSCEEEEEECSHHHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHH
T ss_pred HHCCCCCEEEEECCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHH
T ss_conf 86157752775200006777788743886245223211111112200000024666664111488513885388676789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 VaKALALGAdaVgigrp~L~~la~~G~egv~~~l~~l~~EL~~~M~l~G~~si~eL~~~~l~~~~~~~~~~~~p~~~~~~ 400 (414)
T d1kbia1 321 VLKALCLGAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEIEMSMRLLGVTSIAELKPDLLDLSTLKARTVGVPNDVLYN 400 (414)
T ss_dssp HHHHHHHTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBGGGCCGGGEECTTTTCEECCCCCCHHHH
T ss_pred HHHHHHCCCCEEEECHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHCCCCCCCCCCCCCCCCHHHC
T ss_conf 99999758998877689999998446999999999999999999998589997891998834232243367899512210
Q ss_pred -------------E
Q ss_conf -------------8
Q 002647 518 -------------G 518 (897)
Q Consensus 518 -------------a 518 (897)
+
T Consensus 401 ~~~~~~~~~~~~~~ 414 (414)
T d1kbia1 401 EVYEGPTLTEFEDA 414 (414)
T ss_dssp HHCCCCCCCCCCCC
T ss_pred CCCCCCCCCCCCCC
T ss_conf 35678775333679
|
| >d2b8na1 c.118.1.1 (A:4-417) Putative glycerate kinase (hypothetical protein TM1585) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: GckA/TtuD-like superfamily: GckA/TtuD-like family: GckA/TtuD-like domain: Putative glycerate kinase (hypothetical protein TM1585) species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=31271.47 Aligned_cols=1 Identities=0% Similarity=-1.389 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~lr~~~~~if~a~v~av~P~~~v~~~l~~~~~~~i~vvg~GKAa~~MA~~~~~~lg~~i~~g~vv~~~~~~~~~~~~i 80 (414)
T d2b8na1 1 PESLKKLAIEIVKKSIEAVFPDRAVKETLPKLNLDRVILVAVGKAAWRMAKAAYEVLGKKIRKGVVVTKYGHSEGPIDDF 80 (414)
T ss_dssp CHHHHHHHHHHHHHHHHTTSHHHHHHTTHHHHCCCSEEEEEESTTHHHHHHHHHHHHGGGEEEEEEEEETTCCCSCCTTC
T ss_pred CHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCE
T ss_conf 95689999999999998419789999847757999889999818999999999997276677059995898677888874
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~v~~a~HP~Pd~~s~~Aa~~il~~~~~~~~~Dlvl~LISGGgSALl~~P~~gitL~dk~~~~~~Ll~sGA~I~eiN~VRk 160 (414)
T d2b8na1 81 EIYEAGHPVPDENTIKTTRRVLELVDQLNENDTVLFLLSGGGSSLFELPLEGVSLEEIQKLTSALLKSGASIEEINTVRK 160 (414)
T ss_dssp EEEEECSSSCCHHHHHHHHHHHHHHSSCCTTCEEEEEECTTHHHHSCCBCTTCCHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 89978999998779999999999996489887689985088540011488999999999999999858998799999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~lS~iKGG~La~~a~pa~v~sLilSDV~GDdl~~IaSGPTvpd~~t~~da~~il~~y~l~~p~~v~~~l~~~~~~~~~~v 240 (414)
T d2b8na1 161 HLSQVKGGRFAERVFPAKVVALVLSDVLGDRLDVIASGPAWPDSSTSEDALKVLEKYGIETSESVKRAILQETPKHLSNV 240 (414)
T ss_dssp TTBSSTTTHHHHHHTTSEEEEEEECCSTTCCTTTGGGCTTSCCCCCHHHHHHHHHHTTCCCCHHHHHHHTSCCCSCCSSE
T ss_pred HHHHCCCCHHHHHHCCCCEEEEEEECCCCCCCHHEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCC
T ss_conf 98753662799971558568999805889981312048867899888999999998398777689986513578433454
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~ii~~n~~al~aa~~~a~~~G~~~~~~~~~l~Gea~~va~~~a~~~~~~~~~~~~~~~p~~li~GGEtTV~v~g~G~G 320 (414)
T d2b8na1 241 EIHLIGNVQKVCDEAKSLAKEKGFNAEIITTSLDCEAREAGRFIASIMKEVKFKDRPLKKPAALIFGGETVVHVKGNGIG 320 (414)
T ss_dssp EEEEEECHHHHHHHHHHHHHHTTCEEEEEEEEECSBHHHHHHHHHHHHHHHHHHCCSSCSSEEEEEEECCBCCCCSCCCC
T ss_pred CEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEECCCCCC
T ss_conf 13895689999999999998749943995342457689999999999999985278888974899756568870689998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 GRNqElaL~~a~~l~~~~~~~~ls~gTDG~DGptdaAGAivd~~t~~~~~~~gld~~~~L~~~DS~~f~~~~~~li~TGp 400 (414)
T d2b8na1 321 GRNQELALSAAIALEGIEGVILCSAGTDGTDGPTDAAGGIVDGSTAKTLKAMGEDPYQYLKNNDSYNALKKSGALLITGP 400 (414)
T ss_dssp CHHHHHHHHHHHHTTTCTTEEEEEEETTSCCSSSSCCEEEEETTHHHHHHHTTCCHHHHHHTTCHHHHHHHTTCEECCCC
T ss_pred CCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCHHHHHHCCCEECCCC
T ss_conf 64399999999983699996999975478878988775887662799999869999999987786999997699786199
Q ss_pred -------------E
Q ss_conf -------------8
Q 002647 518 -------------G 518 (897)
Q Consensus 518 -------------a 518 (897)
-
T Consensus 401 TgTNV~Dl~i~li~ 414 (414)
T d2b8na1 401 TGTNVNDLIIGLIV 414 (414)
T ss_dssp CSCCCCEEEEEEEC
T ss_pred CCCCHHHHEEEEEC
T ss_conf 99656350777969
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=31266.36 Aligned_cols=1 Identities=0% Similarity=-0.360 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ee~~~a~~~A~~Af~~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~~~e~~~~rl~~~~~~i~~~~~~ 80 (414)
T d1o20a_ 1 DELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIKA 80 (414)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHH
T ss_conf 97999999999999998629999999999999999997699999999999865886041177787874249999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~~~~l~ 160 (414)
T d1o20a_ 81 CETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAI 160 (414)
T ss_dssp HHHHHHSCCCTTCEEEEEECTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHCCCHHEECCCCHHCCCCCCCCCCCCHHHHHH
T ss_conf 99999865511233443344332101211221232012315717776514101001365201045600011002034677
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~~~~le~gGgn~~viv~~dAd~~~A~ 240 (414)
T d1o20a_ 161 REALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKKAV 240 (414)
T ss_dssp HHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHCSSCBCCCCCCCEEEEECTTSCHHHHH
T ss_pred HHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHCCCCCEECCCCCCCCEECCCCCCHHHHH
T ss_conf 76543212432124555543103444123334358699746079999876540344021046987871053335434456
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~FgPvl~v~~~ 320 (414)
T d1o20a_ 241 PVIINAKTQRPGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEKTREIVPDVVPATEDDWPTEYLDLIIAIKVV 320 (414)
T ss_dssp HHHHHHHHSCTTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEECHHHHHHSTTSEECCGGGTTCCCCSSEEEEEEE
T ss_pred HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEECCCCCCCCEEEEEEEEEEEE
T ss_conf 68875441378643355522010889999999986899976986555465542110000002456770220037999994
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~dEAI~~aN~~~yGLsa~I~T~d~~~a~~~~~~i~~G~V~IN~~~~~~~~~~~g~g~~~G~~~~~~~~~G~~gl~~~t 400 (414)
T d1o20a_ 321 KNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELT 400 (414)
T ss_dssp SSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSSCCEECCTGGGE
T ss_pred CCHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHC
T ss_conf 99999999985589998179995899999999983981499991898688888879978156249989987456799849
Q ss_pred -------------E
Q ss_conf -------------8
Q 002647 518 -------------G 518 (897)
Q Consensus 518 -------------a 518 (897)
-
T Consensus 401 ~~K~vv~~~~~~~~ 414 (414)
T d1o20a_ 401 TYKFVVLGEYHVRE 414 (414)
T ss_dssp EEEEEEECSSCCCC
T ss_pred EEEEEEECCCCCCC
T ss_conf 57799987875378
|
| >d1t0la_ c.77.1.1 (A:) NADP-dependent isocitrate dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Isocitrate/Isopropylmalate dehydrogenase-like superfamily: Isocitrate/Isopropylmalate dehydrogenase-like family: Dimeric isocitrate & isopropylmalate dehydrogenases domain: NADP-dependent isocitrate dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=31264.90 Aligned_cols=1 Identities=0% Similarity=-2.021 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~iV~l~GDE~tr~i~~~i~~~~~~~~~di~~~~~d~G~e~~~~tg~~l~~daieaik~~~v~lkG~~~tP~~ 80 (414)
T d1t0la_ 1 MSKKISGGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKHNVGVKCATITPDE 80 (414)
T ss_dssp CCCCEEEEEEEEEECCHHHHHHHHHHHHHTTTTTEEEEEEEEECSHHHHHHTTTHHHHHHHHHHHHHSEEEECCCCCCCH
T ss_pred CCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHCCEEEECCCCCCCC
T ss_conf 98643368779956718999999999999707897752799826789998629967799999998669886678679873
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~s~n~~lR~~~~~~~~~rp~~~~~~~~~~~~~~~d~vvvREnteg~Y~g~e~~~~~~~~~~~~~~~~~ 160 (414)
T d1t0la_ 81 KRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVSGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEITYTPSD 160 (414)
T ss_dssp HHHHHHTCSSCCCCHHHHHHHHHCCEEEEEECCCTTCCCSBTTCCSCEEEEEECSSGGGGCEEEEECSSEEEEEEEEETT
T ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCEEEEEEEECC
T ss_conf 33330012211010028889862765231126864899876787674367404554425436899779860689985046
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~a~~~a~~~r~~v~~~~K~nv~~~t~glfr~~~~eva~~yp~~~~~ 240 (414)
T d1t0la_ 161 GTQKVTYLVHNFEEGGGVAMGMYNQDKSIEDFAHSSFQMALSKGWPLYLSTKNTILKKYDGRFKDIFQEIYDKQYKSQFE 240 (414)
T ss_dssp CSCCEEEEEEEECSCCEEEEEEEEEHHHHHHHHHHHHHHHHHHTCCEEEEECTTTSTTHHHHHHHHHHHHHHHHTHHHHH
T ss_pred CCCCEEECCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 65310000123467784268776205566788889999998469735875035614445288999999999876330134
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~v~~~~~~~Da~~~~~~~~p~fdVivt~NLfGDILSDl~a~l~GglGl~pSanig~~~~~~~fe~~hg~aP~hGsapd 320 (414)
T d1t0la_ 241 AQKIWYEHRLIDDMVAQAMKSEGGFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLVCPDGKTVEAEAAHGTVTRHYRMYQ 320 (414)
T ss_dssp HTTCCEEEEEHHHHHHHHHHSCCCEEEEECHHHHHHHHHHHHHHHTCTTSEEEEEECTTSSCEEEECSSCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHC
T ss_conf 32025666677789874148988728997674530566566562577431210115764334412355555543221001
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 iAGk~iANP~A~ILS~amML~~lg~~d~~~~l~~~A~~Ie~Av~~~l~~G~~T~DlgG~~~~~~~~~~~~~lsT~ef~da 400 (414)
T d1t0la_ 321 KGQETSTNPIASIFAWTRGLAHRAKLDNNKELAFFANALEEVSIETIEAGFMTKDLAACIKGLPNVQRSDYLNTFEFMDK 400 (414)
T ss_dssp TTCCCCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHSCGGGCCGGGCCCHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 37766539099999999999985265643689999999999999999679988231877666665556676589999999
Q ss_pred -------------E
Q ss_conf -------------8
Q 002647 518 -------------G 518 (897)
Q Consensus 518 -------------a 518 (897)
-
T Consensus 401 vi~~L~~~l~~~~~ 414 (414)
T d1t0la_ 401 LGENLKIKLAQAKL 414 (414)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHCCC
T ss_conf 99999998865659
|
| >d1vh4a_ b.80.6.1 (A:) Stabilizer of iron transporter SufD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Single-stranded right-handed beta-helix superfamily: Stabilizer of iron transporter SufD family: Stabilizer of iron transporter SufD domain: Stabilizer of iron transporter SufD species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=31196.40 Aligned_cols=1 Identities=100% Similarity=2.298 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~GlPt~k~E~WKyT~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivf 80 (413)
T d1vh4a_ 1 NALQQWHHLFEAEGTKRSPQAQQHLQQLLRTGLPTRKHENWKYTPLEGLINSQFVSIAGEISPQQRDALALTLDSVRLVF 80 (413)
T ss_dssp CHHHHHHHHHHC---CCCHHHHHHHHHHHHHCCCCTTSTTCTTCCCHHHHTSCEECCCCCCCHHHHHHHCCCCCSEEEEE
T ss_pred CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCEEEEE
T ss_conf 97899999998628846299999999999729889987281479879974357765677668002000234568548999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 vnG~~~~~ls~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~LN~a~~~~g~~I~V~~~~~~~~PI~i~~~~~~~~~~~~~~ 160 (413)
T d1vh4a_ 81 VDGRYVPALSDATEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNT 160 (413)
T ss_dssp ETTEECGGGSCCCTTSSCEEEEESCCTTCCCCSSCCHHHHHHHHHCSCEEEEEECTTCCCSSCEEEEEEECCCSSSCEEE
T ss_pred ECCEECHHCCCCCCCCCEEEECHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCEEECCCCEEEEEECCCCCCCCCC
T ss_conf 89998210056755577288515755404110110012332321025432674125357604541467503644344333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~r~~I~v~ena~v~iiE~~~~~~~~~~~~n~~~ei~l~~nA~l~~~~iq~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 240 (413)
T d1vh4a_ 161 AHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLAEDATAFSHSFLL 240 (413)
T ss_dssp EEEEEEEEECTTCEEEEEEEEEESSSSCEEEEEEEEEEECTTCEEEEEEEECCCTTCEEEEEEEEEECTTCEEEEEEEEC
T ss_pred CCEEEEEEECCCCHHHHHHHCCCCCCCCCEECCEEEEEECCCCEEEEHHHHHHCCCCCCCCEEEEECCCCCCEEEEECCC
T ss_conf 11145653055202211121145544100002205899526642430334442233421220112003454146532000
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 G~~~~r~~~~~~L~G~~a~~~~~g~~~~~~~q~~D~~~~i~H~~~~t~S~~~~k~vl~d~s~~vf~G~i~V~~~A~~t~a 320 (413)
T d1vh4a_ 241 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDG 320 (413)
T ss_dssp CCSEEEEEEEEEECSTTCEEEEEEEECCCTTCEEEEEEEEEECSSSCEEEEEEEEEECTTCEEEEEEEEEECTTCTTEEE
T ss_pred CCCHHHCCCHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHH
T ss_conf 21100110000112000110011023466422433222320155542041343124666640488653035655225665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~q~~~~llls~~a~~~s~P~Lei~~ddv~~~Hgatvg~id~~~lfYL~sRGi~~~eA~~ll~~gF~~~~~~~~~~~~~~~ 400 (413)
T d1vh4a_ 321 QMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQIFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQ 400 (413)
T ss_dssp EEEEEEEECSTTCEEEEEEEEEECCSSEEEEEEEEEECCCHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCCHHHHH
T ss_pred HHHHHHHCCCCCCEEEECCEEEEECCCEEEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 77665301567744875522899639816994000467898999999976999999999999998999998698299999
Q ss_pred ------------E
Q ss_conf ------------8
Q 002647 518 ------------G 518 (897)
Q Consensus 518 ------------a 518 (897)
|
T Consensus 401 ~~~~~i~~~l~~~ 413 (413)
T d1vh4a_ 401 QVLARIGQRLPGG 413 (413)
T ss_dssp HHHHHHHTTSTTC
T ss_pred HHHHHHHHHHCCC
T ss_conf 9999999872489
|
| >d1hdia_ c.86.1.1 (A:) Phosphoglycerate kinase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate kinase superfamily: Phosphoglycerate kinase family: Phosphoglycerate kinase domain: Phosphoglycerate kinase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=0 Score=31190.60 Aligned_cols=1 Identities=0% Similarity=-0.991 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~ltl~d~d~~gK~VllRvD~NvPi~~g~I~Dd~RI~~~lpTI~~L~~~gak~Vvl~SH~GRP~~~~~~d~~SL~pva~~ 80 (413)
T d1hdia_ 1 NKLTLDKLNVKGKRVVMRVDFNVPMAAAQITNNARIKAAVPSIKFCLDDGAKSVVLMSHLGRPDGSPMPDKYSLQPVAAE 80 (413)
T ss_dssp CBCBGGGSCCTTCEEEEECCCCCCBSSSSBSCCHHHHHHHHHHHHHHHTTCSEEEEECCCSCCCSSCCTTTSCSHHHHHH
T ss_pred CCCCHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 98754102868998999931587744990897489999999999999879998999537889999977854587999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 L~~~L~~~V~f~~d~~g~~~~~~i~~l~~geilLLENvRF~~~E~~~~~~~~~~~~~~e~~n~~~f~~~La~l~DvyVND 160 (413)
T d1hdia_ 81 LKSALGKAVLFLKDCVGPAVEKACADPAAGSVILLENLRFHVEEEGKGKDASGNKAAGEPAKIKAFRASLSALGDVYVND 160 (413)
T ss_dssp HHHHHTSCCEECSCSSSHHHHHHHHSCCTTEEEECCCGGGSHHHHTEEECTTSCEEECCHHHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHCCCEEEECCCCHHHHHHHHHCCCCCEEEEECCHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCEEEEC
T ss_conf 99986886066056513556554320234317980221104211134432011000110243699999876328889953
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 AF~~aHR~haS~~gi~~~~~~~G~LmekEi~~L~~~l~~p~~P~vaIlGGaKvsdKi~vi~~L~~k~d~iiigGgmantf 240 (413)
T d1hdia_ 161 AFGTAHRAHSSMVGVNLPKKAGAFLMKKELNYFAAAAESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTF 240 (413)
T ss_dssp CGGGTTCCCHHHHCCCCSCEEECHHHHHHHHHHHHHHTSCCSSEEEEECCSCSGGGHHHHHHHHTTCSEEEECGGGHHHH
T ss_pred CHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCEEEECCHHHHHH
T ss_conf 42111125762220135642116899999999876540788761699842554338999998875310154035468999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 L~a~~g~~iG~sl~e~~~~~~~~~~~~~~~~~~~~i~lp~d~~~~~~~~~~~~~~~~~~~~~i~~~~~i~DIG~~Ti~~~ 320 (413)
T d1hdia_ 241 LKVLNNMEIGTSLFDEAGKKIVKNLMSKAAANGVKITLPVDFVTADKFDEQAKIGQATVASGIPAGWMGLDCGPKSSAKY 320 (413)
T ss_dssp HHHHHCCCBTTCCCCTTGGGTHHHHHHHHHHHTCEEECCCEEEEESSSSTTCCEEEEETTTCBCTTCEEEEECHHHHHHH
T ss_pred HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHH
T ss_conf 99715974563340322004677777789871984344541354124566555455442113588764431530236788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~I~~aktI~wNGP~GvfE~~~F~~GT~~i~~~ia~~~~~~a~sivGGGdT~aai~~~g~~~~~~hvSTGGGA~L~~L~ 400 (413)
T d1hdia_ 321 SEAVARAKQIVWNGPVGVFEWEAFAQGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDNVSHVSTGGGASLELLE 400 (413)
T ss_dssp HHHHHHCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHHHHTTCEEEECTTHHHHHHHHTTCTTTSSEECSCHHHHHHHHT
T ss_pred HHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCCCEEECCHHHHHHHHC
T ss_conf 88761587799988834566761538999999999985148998999377999999974986798479278799999987
Q ss_pred ------------E
Q ss_conf ------------8
Q 002647 518 ------------G 518 (897)
Q Consensus 518 ------------a 518 (897)
.
T Consensus 401 G~~LPgi~aL~~~ 413 (413)
T d1hdia_ 401 GKVLPGVDALSNV 413 (413)
T ss_dssp TCCCHHHHTSCBC
T ss_pred CCCCCHHHHHHCC
T ss_conf 9996246352049
|
| >d2qgma1 c.150.1.3 (A:33-445) Succinoglycan biosynthesis protein BC3205 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: EreA/ChaN-like superfamily: EreA/ChaN-like family: EreA-like domain: Succinoglycan biosynthesis protein BC3205 species: Bacillus cereus [TaxId: 1396]
Probab=100.00 E-value=0 Score=31187.05 Aligned_cols=1 Identities=0% Similarity=-0.426 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~~~~i~~~a~pl~~~d~~~~~~DL~~L~~~v~dariV~LGEatHGt~Ef~~~r~~l~r~Lvee~Gf~~vA~E 80 (413)
T d2qgma1 1 SGQSVQKNIVKSIQSQANPLKTIEPSKPFEDLKPLKKMIGNAQYVGLGENTHGSSEIFTMKFRLVKYLVTEMGFTNFAME 80 (413)
T ss_dssp CCSSHHHHHHHHHHHHCEECCCCCTTSCCGGGHHHHHHHTTCSEEEECCSSSCBHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 98427789999999846558778989876789999986479749998468667079999999999999997599789992
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~d~~~~~~vn~yV~~g~g~~~~~~~~~w~~~e~~~lv~WlR~~N~~~~~~~~v~f~G~D~~~~~~~s~~~v~~yl~~~~p 160 (413)
T d2qgma1 81 EDWGNGLKLNEYIQTGKGNPREFLKLLYPTDEIIAMIEWMKDYNADPSNKKKIQFIGLDLKALDQGSFNKVIDYVRLHRP 160 (413)
T ss_dssp EEHHHHHHHHHHHHHCCSCGGGTSCTTSCBHHHHHHHHHHHHHHHCTTCCSCCEEEEEECSCCCHHHHHHHHHHHHHHCT
T ss_pred CCCHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCH
T ss_conf 69588999999986388787887787525177999999999970458978842699744465535469999999986196
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~ 240 (413)
T d2qgma1 161 DLLAEVEENYKELSSFTGSIQEYMKLTPKLKEKFKANAERVARLLKDENEQANTEIIPSEYIWAKATASAIEKFTTMLLP 240 (413)
T ss_dssp TSHHHHHHHHHTGGGSCSCHHHHTTSCHHHHHHHHHHHHHHHHHTSCC-----------CHHHHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 78999999974603123478999775176788899999999999997676505432344899999999999999999706
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~RD~~Maenl~~~~~~~~~KiivwAHN~Hi~~~~~~~~~~~~~~G~~L~e~~G~~y~~IG~~~~~G~v~a~~ 320 (413)
T d2qgma1 241 NDYPSIIKLHEQYLADHAMWAQETFGGKTMVWAHNIHIAKGIIDEKLYPYVAGQFLKERLDNNYVTIGSTTTEGNFTLYS 320 (413)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHHHHHCSCEEEECCHHHHCSSCSCTTTCSSCHHHHHHHHHGGGEEEEEEEEEEEEEEESC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCEEECCC
T ss_conf 87401377899999999999974789978999554110757565433666589999998488469999873466041257
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~~~~~~~~~~~~~p~~~~s~e~~l~~~~~~~~~ld~r~~~~~~~~~l~~~r~~r~iG~~y~P~~~~y~~~~~~~~fDa 400 (413)
T d2qgma1 321 EYNPSTGGKITTDTIPQDVKSFNYTLGKVPYKMFLLDNRHLKGQAEKWVKAKRPLLSIGGQILPNSSVYFDTSLLEQFDI 400 (413)
T ss_dssp CC-----CCCEEEECCCCTTSHHHHHHHSSCSEEEEEGGGCCHHHHHHHHSEEEEECCCSCC-----CEEEEEHHHHCSE
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEECCCCCHHHHHHHHCCCHHCCCEEEECCCCCCCCCCCHHHHCCE
T ss_conf 77875566303678999952699997135877467552004535678883711211310244588764446895997978
Q ss_pred ------------E
Q ss_conf ------------8
Q 002647 518 ------------G 518 (897)
Q Consensus 518 ------------a 518 (897)
-
T Consensus 401 li~i~~ttPa~~~ 413 (413)
T d2qgma1 401 IFHIRKTSPSHIK 413 (413)
T ss_dssp EEEEEEECBCCBC
T ss_pred EEEECCCCCCCCC
T ss_conf 9997146703129
|
| >d1lwda_ c.77.1.1 (A:) NADP-dependent isocitrate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Isocitrate/Isopropylmalate dehydrogenase-like superfamily: Isocitrate/Isopropylmalate dehydrogenase-like family: Dimeric isocitrate & isopropylmalate dehydrogenases domain: NADP-dependent isocitrate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=0 Score=31186.96 Aligned_cols=1 Identities=0% Similarity=-0.527 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~ki~v~~pIv~l~GDeit~~~~~~i~~~l~~~~~di~~~~~d~G~~~~~~tg~~l~~eaiea~k~~~aiLkGa~~tP~ 80 (413)
T d1lwda_ 1 ADQRIKVAKPVVEMDGDEMTRIIWQFIKEKLILPHVDVQLKYFDLGLPNRDQTNDQVTIDSALATQKYSVAVKCATITPD 80 (413)
T ss_dssp CCCCEECSSCEEEEECCHHHHHHHHHHHHHTTTTTEECCEEEEECSHHHHHHTTTHHHHHHHHHHHHHSEEEECCCCCCC
T ss_pred CCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHCCEEEECCCCCCC
T ss_conf 99750305777995486379999999999970678886279970788999874996769999999975977788867997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~s~n~~lR~~ldl~an~RP~~~~~~~~~~~~~~~d~VivREnteg~Y~g~e~~~~~~~~~~i~~~~~ 160 (413)
T d1lwda_ 81 EARVEEFKLKKMWKSPNGTIRNILGGTVFREPIICKNIPRLVPGWTKPITIGRHAHGDQYKATDFVVDRAGTFKIVFTPK 160 (413)
T ss_dssp HHHHHHHTCSSCCCCHHHHHHHHHCSEEEEEECCCTTSCCSSTTCCSCEEEEEECSSGGGGCEEEEECSSEEEEEEEEET
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCEECCCCCCCEEEEECC
T ss_conf 32235444432210001568976387458721002578876788887727752254443503423226766320577405
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ria~~af~~a~~~~~~vt~v~K~nvl~~~~glf~~~~~eva~~~p~~~~~ 240 (413)
T d1lwda_ 161 DGSSAKQWEVYNFPAGGVGMGMYNTDESISGFAHSCFQYAIQKKWPLYMSTKNTILKAYDGRFKDIFQEIFEKHYKTDFD 240 (413)
T ss_dssp TCCCCEEEEEEEESSCEEEEEEEEEHHHHHHHHHHHHHHHHHHTCCEEEEECTTTSTTHHHHHHHHHHHHHHHHTHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 66542233200256652000001332025678999999997159605775046356600479999999999874003564
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~I~~~~~~vd~~~~~lv~~p~~~Vivt~NlfGDIlSDlaa~l~GglGl~pSanig~~~~~~~fe~~HGsap~~ag~~~ 320 (413)
T d1lwda_ 241 KYKIWYEHRLIDDMVAQVLKSSGGFVWACKNYDGDVQSDILAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYREHQ 320 (413)
T ss_dssp HTTCCEEEEEHHHHHHHHHHSCCCEEEEECHHHHHHHHHHHHHHHTCTTSEEEEEECTTSSCEEEECCSCCCHHHHHHHH
T ss_pred CCEEEEEHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHH
T ss_conf 23799861455555565228988739997563405676677874389777764324787554333346566000000121
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 iagk~iANP~a~IlS~ammL~~lg~~~~~~~l~~~A~~Ie~Av~~~l~~G~~T~DlgG~~~~~~~~~~~~~~~sT~ef~d 400 (413)
T d1lwda_ 321 KGRPTSTNPIASIFAWTRGLEHRGKLDGNQDLIRFAQTLEKVCVETVESGAMTKDLAGCIHGLSNVKLNEHFLNTSDFLD 400 (413)
T ss_dssp TTCCCCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHCTTSCCBTTTBCCHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 17765659599999999999973454444579999999999999999779988465887666655555677638999999
Q ss_pred ------------E
Q ss_conf ------------8
Q 002647 518 ------------G 518 (897)
Q Consensus 518 ------------a 518 (897)
-
T Consensus 401 aV~~~L~~~l~~~ 413 (413)
T d1lwda_ 401 TIKSNLDRALGRQ 413 (413)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHCCC
T ss_conf 9999999987529
|
| >d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Tandem AAA-ATPase domain domain: Nucleotide excision repair enzyme UvrB species: Bacillus caldotenax [TaxId: 1395]
Probab=100.00 E-value=0 Score=31193.58 Aligned_cols=1 Identities=0% Similarity=-0.394 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~f~~~~~~~p~gDQP~aI~~l~~~l~~g~~~q~l~GltGS~ka~~iA~l~~~~~rp~LVVt~n~~~A~qL~~dL~~~l 80 (413)
T d1t5la1 1 EGRFQLVAPYEPQGDQPQAIAKLVDGLRRGVKHQTLLGATGTGKTFTISNVIAQVNKPTLVIAHNKTLAGQLYSELKEFF 80 (413)
T ss_dssp CCCCCCCCSSCCCTTHHHHHHHHHHHHHHTCSEEEEEECTTSCHHHHHHHHHHHHTCCEEEECSSHHHHHHHHHHHHHHC
T ss_pred CCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHC
T ss_conf 98427705889999888999999999865998589967787489999999999739998999489999999999999874
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~v~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~vIVv~~~a~~~~l~~p~~~~~~~l~l 160 (413)
T d1t5la1 81 PHNAVEYFVSYYDYAQPEAYVPQTDTYIEKDAKINDEIDKLRHSATSALFERRDVIIVASVSCIYGLGSPEEYRELVVSL 160 (413)
T ss_dssp TTSEEEEECCGGGTCCCSEEETTTTEEECCCSCCCHHHHHHHHHHHHHHHHCSCEEEEECGGGGSCCCCHHHHHHTSEEE
T ss_pred CCCCEEECCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHEEEEE
T ss_conf 87745432421211442014743443322345677788888766655203567714653000253257857843105898
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~G~~i~~~~l~~~L~~~GY~r~~~V~~~GeFsvRG~IiDIfp~~~~e~PvRIEffgDeIesIr~Fd~~tQrs~~~~~~v 240 (413)
T d1t5la1 161 RVGMEIERNALLRRLVDIQYDRNDIDFRRGTFRVRGDVVEIFPASRDEHCIRVEFFGDEIERIREVDALTGEVLGEREHV 240 (413)
T ss_dssp ETTCSCCHHHHHHHHHHTTCEECSSSCCTTEEEECSSEEEECCTTCSSEEEEEEESSSSEEEEEEEETTTCCBCCCCSEE
T ss_pred ECCCHHHHHHHHHHHHHHCCCCCCEEEECCEEEEECCHHHHCCCCCCCCCCCEEEECCHHEEEECCCCCCCCCCCCCCEE
T ss_conf 66862528899999998435103100000205775351642478533564030650301103551135457211243179
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~I~Pa~e~i~~~~~~~~a~~~i~~el~~~~~~~~~~~~~~ea~rl~~~~~~d~e~l~e~~~~~gie~y~~~~~~r~~~~~ 320 (413)
T d1t5la1 241 AIFPASHFVTREEKMRLAIQNIEQELEERLAELRAQGKLLEAQRLEQRTRYDLEMMREMGFCSGIENYSRHLALRPPGST 320 (413)
T ss_dssp EECCSSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCCTTGGGGHHHHHTCCTTCC
T ss_pred EEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCC
T ss_conf 96346036269999999999999999999999987785889999998767579999852764444555443204666688
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~tLlDY~~~d~l~~iDE~~~~~~q~~~~~~~~~~r~~~l~e~G~~LP~a~dn~pL~~ee~~~~~~~~i~vsatP~~~e~ 400 (413)
T d1t5la1 321 PYTLLDYFPDDFLIIVDESHVTLPQLRGMYNGDRARKQVLVDHGFRLPSALDNRPLTFEEFEQKINQIIYVSATPGPYEL 400 (413)
T ss_dssp CCCHHHHSCTTCEEEEETHHHHHHHHHHHHHHHHHHHHHHHHHTSSCGGGGGSSCCCHHHHHHHCSEEEEEESSCCHHHH
T ss_pred CCHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCHHH
T ss_conf 73244104787089993626569999999988899899888651657556557976889999864987999579970557
Q ss_pred ------------E
Q ss_conf ------------8
Q 002647 518 ------------G 518 (897)
Q Consensus 518 ------------a 518 (897)
-
T Consensus 401 ~~~~~~v~q~irp 413 (413)
T d1t5la1 401 EHSPGVVEQIIRP 413 (413)
T ss_dssp HHSSSCEEECCCT
T ss_pred HHCCCEEEEEECC
T ss_conf 7468846886286
|
| >d1zjca1 e.60.1.1 (A:3-415) Aminopeptidase S, AMPS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Thermophilic metalloprotease-like superfamily: Thermophilic metalloprotease-like family: Thermophilic metalloprotease (M29) domain: Aminopeptidase S, AMPS species: Staphylococcus aureus [TaxId: 1280]
Probab=100.00 E-value=0 Score=31186.71 Aligned_cols=1 Identities=0% Similarity=-1.623 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~f~~~L~k~A~llV~~~l~vqkGe~VlI~a~~~~~~lvral~~~a~~aGA~pV~v~~~d~~i~r~~~~~~~~e~l~~~e~ 80 (413)
T d1zjca1 1 NYKEKLQQYAELLVKVGMNVQPKQPVFIRSSVETLELTHLIVEEAYHCGASDVRVVYSDPTLKRLKFENESVEHFANHEI 80 (413)
T ss_dssp CHHHHHHHHHHHHHHTTTCCCTTCCEEEEEETTCHHHHHHHHHHHHHTTCCSEEEEEECHHHHHHHHHHSCHHHHHHTSS
T ss_pred CHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCHHHHCCCCC
T ss_conf 97899999999999983068999989999567439999999999998699648995087899999871899668353202
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~a~i~i~~~~p~~l~~vd~~ki~~~~~a~~~~~k~~~~~~~~~~~~W~i~~~Pt~a~A~~a~~~l 160 (413)
T d1zjca1 81 KSYDVEARMDYVKRGAANLALISEDPDLMDGIDSQKLQAFQQQNARAFKGYMESVQKNQFPWVVAAFPSKAWAKRVYPEL 160 (413)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEECCCTTTTTTSCHHHHHHHHHHHHHHTHHHHHHHHTTCSCEEEEECCCHHHHHHHCTTS
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCC
T ss_conf 56679999999865884899726895242037989999999999999899999986476566999568767776645899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~e~~~~~~d~if~a~~lD~~dpv~~w~~~~~~l~~~~~~L~~~~~~~~~~~~~gTDLt~~l~~~~~~~~~~~~~~~~~ 240 (413)
T d1zjca1 161 SVEEAYIKFIDEVFDIVRIDGNDPVENWRQHIANLSVYAQKLQQKNYHALHYVSEGTDLTVGLAKNHIWEDATSYVNGKE 240 (413)
T ss_dssp CHHHHHHHHHHHHHHHTTCSSSCHHHHHHHHHHHHHHHHHHHHHHCCSEEEEEETTEEEEEEECTTBCCBCSEEEGGGTS
T ss_pred CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCEEEECCCCCCCCCC
T ss_conf 87999999999999750788051799999999999999999854072479943898407999358737716875236777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~NlP~gEvft~P~~~~~~G~i~~~~~~~~~G~~~~~i~l~f~~G~vv~~~~~~~~~~l~~~l~~d~~a~~~gE~~i 320 (413)
T d1zjca1 241 QAFIANIPTEEVFTAPDRNRVDGYVTNKLPLSYNGTIIDQFKLMFKDGEIIDFSAEKGEAVLKDLINTDEGSRRLGEVAL 320 (413)
T ss_dssp SEEESBSSCCCEEECEEEEEEEEEEECSSCEEETTEEEEEEEEEEETTEEEEEEEEESHHHHHHHHTSSGGGGSEEEEEE
T ss_pred CCCCCCCCCCCEEEEECCCCEEEEEEECEECCCCCEECCCCEEEEECCEEEEEECCCHHHHHHHHHCCCCCCCEEEEEEE
T ss_conf 76648899800686131586137999782526298832481899989999999747659999876404866536767753
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 g~n~~~~~~~~~~~~~~L~DEkgt~H~a~G~~Y~~~~~~~~~~~~~~~~~~G~n~s~~H~D~~i~~~~~~i~gv~~dG~~ 400 (413)
T d1zjca1 321 VPDDSPISNRNTIFYNTLFDENAACHLAIGSAYAFNIQGGTEMTVEEKIASGLNDSNVHVDFMIGSSDLTIYGIFEDGSK 400 (413)
T ss_dssp CCSSSTTGGGCCCCSSHHHHTTTSCEEEEECCCGGGBTTGGGCCHHHHHHHTCCCCSCEEEEECCCTTCEEEEECTTSCE
T ss_pred CCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCHHHCCCCCCCCHHHHHCCCCCCCCEEEEECCCCCCEEEEEEEECCCE
T ss_conf 16886543435442451587489744667756421113665578145401798676457876347871568999818978
Q ss_pred ------------E
Q ss_conf ------------8
Q 002647 518 ------------G 518 (897)
Q Consensus 518 ------------a 518 (897)
-
T Consensus 401 ~~I~~~G~f~~~~ 413 (413)
T d1zjca1 401 ELVFENGNWASTF 413 (413)
T ss_dssp EEEEETTEECTTC
T ss_pred EEEEECCEECCCC
T ss_conf 8999899976769
|
| >d1ulva1 a.102.1.5 (A:274-686) Glucodextranase, domain A {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: Bacterial glucoamylase C-terminal domain-like domain: Glucodextranase, domain A species: Arthrobacter globiformis [TaxId: 1665]
Probab=100.00 E-value=0 Score=31185.41 Aligned_cols=1 Identities=100% Similarity=1.899 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~~~~~~~S~l~lk~~~~~~~~GaiiAapt~~~pe~~~~~~n~d~Yry~W~RDaa~~~~al~~~G~~~~a~~~ 80 (413)
T d1ulva1 1 PATSLTGALRTQYDVSLMTVKSHEDKTFPGAFIASLTIPWGQAASAETHREGYHAVWARDMYQSVTALLAAGDEEAAARG 80 (413)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHTTBCSSSTTCBCSCSSCTTGGGSBCSSCCCTTCSBCHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 98657889999999999999973468999848875888887666775689871166180599999999986998999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~l~~~~~~~~G~~~~~y~~dg~~~~~~~Q~D~~g~~l~~~~~~~~~~~~~~~~~i~~a~~~l~~~~~~~~~~lWEe~~ 160 (413)
T d1ulva1 81 VEWLFTYQQQPDGHFPQTSRVDGTIGQNGIQLDETAFPILLANQIGRTDAGFYRNELKPAADYLVAAGPKTPQERWEETG 160 (413)
T ss_dssp HHHHHHHTCCTTSCCCSCBCTTSCBCCCCCBTHHHHHHHHHHHHHTCCCHHHHHHTHHHHHHHHHHHCSCBSBCTTSSCC
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 99999985079996056546687767776763038999999999853001678999999999999738898745454678
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 g~~~~T~~~~~~aL~~aa~la~~~gd~~~a~~~~~~A~~i~~~i~~~~~~~~~~~~~~~y~~r~~~~~~~~~~~~~~~~~ 240 (413)
T d1ulva1 161 GYSTSTLASQIAALAAAADIAGKNGDAGSAAVYRATADEWQRSTEKWMFTTNGPVGDGKYYLRISATGNPNDGATRDWGN 240 (413)
T ss_dssp BEEHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTHHHHHEESSCSSTTSCEECSEESSSCTTSCCEEECST
T ss_pred CCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC
T ss_conf 85431189999999999999998398167889999999999999996018655623321011036666654320000123
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~vDas~l~~~~~g~~~~~d~r~~~t~~~i~~~L~~~~~~g~~~~Ry~~D~y~~~~~g~~~~~~~i~t~W~~ 320 (413)
T d1ulva1 241 GAGVHPENAVLDGGFLEFVRLGVKAPADPYVADSLAETDASISQETPGGRMWHRYTYDGYGEKADGSPWDGTGIGRLWPL 320 (413)
T ss_dssp TCCEEEGGGCCBGGGGHHHHTTSSCTTCHHHHHHHHHHHHHHEEEETTEEEECSBTTCCCSCCTTSCCCSSCCCCCBCTH
T ss_pred CCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 45666677765788763112178798887899999999998546778777420024667657788887633112789999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~~~a~~~~g~~~~A~~ll~~l~~~~~~~G~LpEqv~~~~~~~~~~~~~~~~~~sa~PlaWS~A~~i~l~~~l~~g~~~ 400 (413)
T d1ulva1 321 LSGERGEYALANGQDALPYLETMHSAANAGYMIPEQVWDRDEPTSYGHELGRSTGSASPLSWAMAQYVRLAAGVKAGAPV 400 (413)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHHHTSCTTCCCCSCBBCCSSCCSSCCCBTSBCSSCBSCHHHHHHHHHHHHHHHHTSCS
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999998648788999999999976687886563016788830025778999888776374789999999998669976
Q ss_pred ------------E
Q ss_conf ------------8
Q 002647 518 ------------G 518 (897)
Q Consensus 518 ------------a 518 (897)
+
T Consensus 401 ~~~~~~~~~~~~~ 413 (413)
T d1ulva1 401 ETPQNVAARYAAG 413 (413)
T ss_dssp SSCHHHHHHHTSS
T ss_pred CCCHHHHHHHHCC
T ss_conf 6762899874149
|
| >d1a0tp_ f.4.3.2 (P:) Sucrose-specific porin {Enterobacterium (Salmonella typhimurium) [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Transmembrane beta-barrels superfamily: Porins family: Maltoporin-like domain: Sucrose-specific porin species: Enterobacterium (Salmonella typhimurium) [TaxId: 90371]
Probab=100.00 E-value=0 Score=31182.11 Aligned_cols=1 Identities=0% Similarity=-1.790 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~GfeFhGY~RsG~g~s~~g~~~~~~~~~~~~~~~~g~~gRLGNE~d~y~El~l~~~~~~~~g~~~~~~~~~a~~~~~~~d 80 (413)
T d1a0tp_ 1 SGFEFHGYARSGVIMNDSGASTKSGAYITPAGETGGAIGRLGNQADTYVEMNLEHKQTLDNGATTRFKVMVADGQTSYND 80 (413)
T ss_dssp CCEEEEEEEEEECCEETTSSCCCCCTTCSGGGGGTCCCCCTTCCCSEEEEEEEEEEEECTTSCEEEEEEEEEEEECCCSS
T ss_pred CCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEEEEECCCCCCCC
T ss_conf 95168527785734847898654563216565666565424664351798883457781599599999997115655578
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~q~yve~~nl~~f~~~~~~a~~WaGkR~y~r~~dIhi~D~~y~~~sG~GaGieni~lG~g~~~~~~~~~~ 160 (413)
T d1a0tp_ 81 WTASTSDLNVRQAFVELGNLPTFAGPFKGSTLWAGKRFDRDNFDIHWIDSDVVFLAGTGGGIYDVKWNDGLRSNFSLYGR 160 (413)
T ss_dssp CCGGGCCCEEEEEEEEEESCTTCCGGGTTCEEEEEEEECTTCEEEGGGTEEEEBCEEEEEEEEEEEETTTEEEEEEEEEE
T ss_pred CCCCCCCCHHEEEEHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEECCCCEECEEEEECCCCCEEEEEEEEC
T ss_conf 75666530110303464586434677998639744420366567542310468658857564721037884688999942
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~g~~~~~~~~~~~~~G~~~G~nk~~ 240 (413)
T d1a0tp_ 161 NFGDIDDSSNSVQNYILTMNHFAGPLQMMVSGLRAKDNDERKDSNGNLAKGDAANTGVHALLGLHNDSFYGLRDGSSKTA 240 (413)
T ss_dssp EEECTTCGGGEEEEEEEEEEEEETTEEEEEEEEECTTGGGCBCSSSSBSCSSCCSEEEEEEEEEEEEESTTSSEEEEEEE
T ss_pred CCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEEECCCEECCCCCEEEEH
T ss_conf 56776667875111687531157379999964303773443215654346764465308999996142000358635151
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 lQyg~G~~a~~~~~~~~~~~~~~~~s~Rl~~~G~~~~~~~~~~~~~~~y~~~~d~~~~~~~~~~~s~gvRP~y~~~~~~~ 320 (413)
T d1a0tp_ 241 LLYGHGLGAEVKGIGSDGALRPGADTWRIASYGTTPLSENWSVAPAMLAQRSKDRYADGDSYQWATFNLRLIQAINQNFA 320 (413)
T ss_dssp EEEEEETTCSCSBTTCCTTCCTTCEEEEEEEEEEEESSSSEEEEEEEEEEEEESSSSTTCEEEEEEEEEEEEEESSSSEE
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCEECCCCEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEEECCCEE
T ss_conf 62375715577565787862799508999986644135876776668999851667789970799999888589668689
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~E~gy~~~~~~~~g~~~~~~~~~~~~K~TlA~~~~~g~~~~fwsRPeiR~faTY~~w~~~~~~~~~~~~~~~~~~~~~ 400 (413)
T d1a0tp_ 321 LAYEGSYQYMDLKPEGYNDRQAVNGSFYKLTFAPTFKVGSIGDFFSRPEIRFYTSWMDWSKKLNNYASDDALGSDGFNSG 400 (413)
T ss_dssp EEEEEEEEEEEEECTTGGGCCCEEEEEEEEEEEEEEESSCTTCTTCCCEEEEEEEEEEECGGGGGSCSSSSTTBTTBCSS
T ss_pred EEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEEEECCCHHHCCCCCCCCCCCCCCCCC
T ss_conf 99998886640344675366666783589999763132897876779789999999805412200224565454677888
Q ss_pred ------------E
Q ss_conf ------------8
Q 002647 518 ------------G 518 (897)
Q Consensus 518 ------------a 518 (897)
=
T Consensus 401 ~~~~fGvQ~E~Ww 413 (413)
T d1a0tp_ 401 GEWSFGVQMETWF 413 (413)
T ss_dssp CEEEEEEEEEEEC
T ss_pred CCEEEEEEEEEEC
T ss_conf 8789999998769
|
| >d1ocka_ c.117.1.1 (A:) Malonamidase E2 {Bradyrhizobium japonicum [TaxId: 375]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Amidase signature (AS) enzymes superfamily: Amidase signature (AS) enzymes family: Amidase signature (AS) enzymes domain: Malonamidase E2 species: Bradyrhizobium japonicum [TaxId: 375]
Probab=100.00 E-value=0 Score=31113.53 Aligned_cols=1 Identities=0% Similarity=-0.924 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~ls~~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~lna~~~~~~~~~~~~~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~ 80 (412)
T d1ocka_ 1 MISLADLQRRIETGELSPNAAIAQSHAAIEAREKEVHAFVRHDKSARAQASGPLRGIAVGIKDIIDTANMPTEMGSEIYR 80 (412)
T ss_dssp CCCHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHCCEEEECTTCCCCSSSTTTTCEEEEETTBCCSSSCCCTTSGGGT
T ss_pred CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHH
T ss_conf 98789999999869998999999999999976961598174439860766798688879987661778974166486661
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~a~~V~~L~~aGaii~gkt~~~e~~~~~~~~~~np~~~~~~~GgSSgG~aaava~g~~~~a~GsDtgGSiR~PA 160 (412)
T d1ocka_ 81 GWQPRSDAPVVMMLKRAGATIIGKTTTTAFASRDPTATLNPHNTGHSPGGSSSGSAAAVGAGMIPLALGTQTGGSVIRPA 160 (412)
T ss_dssp TCCCSSCCHHHHHHHHTTCEEEEEECCCGGGSSCCCSCCBTTBTTBCCCSSSHHHHHHHHTTSCSEEEEEESSSTTHHHH
T ss_pred CCCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCH
T ss_conf 78875301477652012433000001666502566543334466666777678761111034566557654023441015
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 a~cGi~GlKPT~G~v~~~g~~~~s~~~dt~Gp~arsv~Dl~~~l~~i~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 240 (412)
T d1ocka_ 161 AYCGTAAIKPSFRMLPTVGVKCYSWALDTVGLFGARAEDLARGLLAMTGRSEFSGIVPAKAPRIGVVRQEFAGAVEPAAE 240 (412)
T ss_dssp HHHTCEEEECSTTSSCCTTBCCSCTTTCEEEEEESSHHHHHHHHHHHHCCGGGSSCCCCSSCEEEECCCGGGCCCCHHHH
T ss_pred HHHCCHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 55302101344100123344443201111223445188999999864288721244776444334432323345106777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~a~~~L~~~G~~v~e~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 320 (412)
T d1ocka_ 241 QGLQAAIKAAERAGASVQAIDLPEAVHEAWRIHPIIQDFEAHRALAWEFSEHHDEIAPMLRASLDATVGLTPKEYDEARR 320 (412)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHSGGGSCHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHH
T ss_conf 78888888888764023223453102333455541125789887777640242321245544333210122210001124
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~r~~~~~~~~~~f~~~D~ll~Pt~p~~ap~~~~~~~~~~~~t~~~nl~G~PaisvP~g~~~GlPvGlQiig~~~~D~~lL 400 (412)
T d1ocka_ 321 IGRRGRRELGEVFEGVDVLLTYSAPGTAPAKALASTGDPRYNRLWTLMGNPCVNVPVLKVGGLPIGVQVIARFGNDAHAL 400 (412)
T ss_dssp HHHHHHHHHHHHTTTCSEEEEESSSSSCCBGGGCCCCCCTTTHHHHHHCCCEEEEEEEEETTEEEEEEEEECTTCHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEECCCCCHHHHH
T ss_conf 67899999999982799999689988776300045687577599999789849983668999607688889999899999
Q ss_pred -----------E
Q ss_conf -----------8
Q 002647 518 -----------G 518 (897)
Q Consensus 518 -----------a 518 (897)
-
T Consensus 401 ~~A~~~E~alg~ 412 (412)
T d1ocka_ 401 ATAWFLEDALAK 412 (412)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHHCC
T ss_conf 999999998583
|
| >d1yzya1 c.146.1.1 (A:1-412) Hypothetical protein HI1011 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: YgbK-like superfamily: YgbK-like family: YgbK-like domain: Hypothetical protein HI1011 species: Haemophilus influenzae [TaxId: 727]
Probab=100.00 E-value=0 Score=31112.72 Aligned_cols=1 Identities=0% Similarity=-2.188 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 i~iIADDlTGA~dt~~~~~~~G~~t~~~~~~~~~~~~~~~dvv~i~t~SR~l~~~eA~~~v~~~~~~l~~~~~~~~~~Kv 80 (412)
T d1yzya1 1 LGVIADDFTGASDIASFLVENGLSTVQMNGVPTQSLNSKVDAIVISLKSRSNPVNEAIEQSLRAYQWLKENGCTQFYFKY 80 (412)
T ss_dssp CEEEESSHHHHHHHHHHHHTTTCCEEEEESCCSSCCCSCCSEEEEECCCSSSCHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 96895273528999999998799099971788500057899899985778999999999999999999863897158999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~s~~DStlRGnig~Ei~a~~~~~~~~~~~v~PA~P~~gR~t~~G~~~v~g~pl~~t~~a~dP~tP~~~s~l~~ll~~qs~ 160 (412)
T d1yzya1 81 CSTFDSTAKGNIGPVTDALLDELNEDFTVITPALPVNGRTIFNGYLFVGDVLLSESGMKNHPITPMVDANLMRLMDAQAK 160 (412)
T ss_dssp CTTCCCCTTCTHHHHHHHHHHHHTCCCEEECCCBGGGTEEEETTEEEETTEEGGGSGGGGCSSSCCCCCBHHHHHHHHCS
T ss_pred EECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCEEEECCEECCCCCCCCCCCCCCCCCHHHHHHHHHCC
T ss_conf 73133777678589999999763997699946756577699998999898875676100288989775027777555237
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~v~~i~~~~v~~~~~~~~~~l~~~~~~~~~~vv~Da~t~~dL~~ia~a~~~~~~~~GsaGla~~l~~~~~~~~~~~~~~ 240 (412)
T d1yzya1 161 GKTGLVAYADVIKGASRVQECFAELKAQGYRYAVVDAVDNSQLEVLAEAVADFKLVTGGSGLGAYMAARLSGGKKGTNAF 240 (412)
T ss_dssp SCEEEECHHHHTTCHHHHHHHHHHHHHTTCSEEEECBSSTHHHHHHHHHTTTCSEEEESHHHHHHHHHHHHTSCCGGGCC
T ss_pred CCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCCCCC
T ss_conf 85354219988645067999999876179866998369889999999973288079954407778887512466654345
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~Lvv~GS~s~~T~~Ql~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 320 (412)
T d1yzya1 241 TPTKGKTVVLSGSCSVMTNKQVEKYREKAPHFQLDVEQAIHNENYIEQLYQWVIANLDSEFAPMVYATVPPDALKAIQHQ 320 (412)
T ss_dssp CCCSCCEEEEECCCSHHHHHHHHHHTTTSCEEECCHHHHHHCTTHHHHHHHHHHTTTTSSSCCEEECCCCHHHHHHHHTT
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEECHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHH
T ss_conf 78888679998267488999999998509859963899617817999999999998736997588843764555566543
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~~~~~~~i~~~l~~~~~~l~~~~~~~lv~tGGdTa~av~~~Lg~~~l~~~~ei~pGvp~~~~~~~gl~ivtK~G~fG~ 400 (412)
T d1yzya1 321 FGVDQASHAIENTFAKLAAKLKQYGVTNFITAGGETSSIVVQELGFTGFHIGKQIAPGVPWLKAVEEDIFLALKSGNFGK 400 (412)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEESHHHHHHHHHHHTCCEEEEEEEEETTEEEEEESSSSCEEEEECTTCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCEEEEEECCCCCC
T ss_conf 01677999999999999999875587869992639999999975998666757426982079766998079997898898
Q ss_pred -----------E
Q ss_conf -----------8
Q 002647 518 -----------G 518 (897)
Q Consensus 518 -----------a 518 (897)
-
T Consensus 401 ~D~~~~a~~~~~ 412 (412)
T d1yzya1 401 EDFFEYAQGMFL 412 (412)
T ss_dssp TTHHHHHHHTTC
T ss_pred HHHHHHHHHHHC
T ss_conf 569999999759
|
| >d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aspartate aminotransferase, AAT species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]
Probab=100.00 E-value=0 Score=31111.66 Aligned_cols=1 Identities=0% Similarity=0.105 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~d~i~~~~~~~~~d~~~~kInL~iG~~~d~~g~~~~~~~V~~A~~~l~~~~~~~~~Y~p~~G~~~lr~ 80 (412)
T d1yaaa_ 1 SATLFNNIELLPPDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTS 80 (412)
T ss_dssp CTTTTTTCCCCCCCTTHHHHHHHHTCCCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHH
T ss_pred CCCHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
T ss_conf 94734458747998699999998467898968830677748889988868999999999728654777899877899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 aia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~Vlip~P~~~~y~~~~~~~g~~~~~~~~~~~~~~~ 160 (412)
T d1yaaa_ 81 NAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKS 160 (412)
T ss_dssp HHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTE
T ss_pred HHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHCCCCEECCCCCCCCCCC
T ss_conf 99999723447665666526871442046799999987503899877246435740679999859910105633334344
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~i~i~~P~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~ 240 (412)
T d1yaaa_ 161 LDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKL 240 (412)
T ss_dssp ECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHT
T ss_pred CCCHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCEEEECCCCCCCCCHHHHHHHHHCC
T ss_conf 21101000124578751799944899985445899999999866114887974520010000588656524432223212
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~ 320 (412)
T d1yaaa_ 241 STVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWH 320 (412)
T ss_dssp TTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHH
T ss_pred CCCCCEEEEEECCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHH
T ss_conf 46887599982577645676760799975056666788888888889999987736797688999999706847789999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~~~~~gG~F~~~~ls~e~~~~L~~e~~V~~~~g~Ris~~g~~~~~i~~l 400 (412)
T d1yaaa_ 321 KDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGLTPQMVKRLEETHAVYLVASGRASIAGLNQGNVEYV 400 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTSEEEGGGCCTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEECCCCHHHHHHHHHHCCEEECCCCEEEECCCCHHHHHHH
T ss_conf 89999999999999999999997289888753689952798229699999999996788878988798515988889999
Q ss_pred -----------E
Q ss_conf -----------8
Q 002647 518 -----------G 518 (897)
Q Consensus 518 -----------a 518 (897)
+
T Consensus 401 ~~ai~~v~k~~~ 412 (412)
T d1yaaa_ 401 AKAIDEVVRFYA 412 (412)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHHHHC
T ss_conf 999999998509
|
| >d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Tyrosine aminotransferase (TAT) species: Trypanosoma cruzi [TaxId: 5693]
Probab=100.00 E-value=0 Score=31110.19 Aligned_cols=1 Identities=0% Similarity=-0.358 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~~~~~~pir~~~~~~~~~~~~~~vI~L~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LRea 80 (412)
T d1bw0a_ 1 WDVSMSNHAGLVFNPIRTVSDNAKPSPSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREA 80 (412)
T ss_dssp CCCCCCHHHHTCCCHHHHHHHTCCCCCSCSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHH
T ss_pred CCCCHHHCCCCCCCHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
T ss_conf 98781234568852899999856777799984788697899999852129999999998628777788998688999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ia~~~~~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~ 160 (412)
T d1bw0a_ 81 VATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDW 160 (412)
T ss_dssp HHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTT
T ss_pred HHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 99999975475435687888886999446222025666543114432046411330144455405864222332223333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~l~~~~~~~~~~~~l~np~NPtG~~~~~~~~~~i~~~~~~~~~~vi~De~Y~~~~~~~~~~~~~~~~~~~~~~~~ 240 (412)
T d1bw0a_ 161 EADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTV 240 (412)
T ss_dssp EECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSC
T ss_pred CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEECHHHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf 12467887653111222222334333332201443023211222377666520217875447888764100001223433
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 320 (412)
T d1bw0a_ 241 PRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAM 320 (412)
T ss_dssp CEEEEEESTTTTSCGGGCCEEEEEECTTCSCHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 11311555755756877743201240433003555554034553347750343202222333222333322110278999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~~~l~~~~g~~~~~p~gg~~l~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~~g~iRis~~~~~e~l~eal 400 (412)
T d1bw0a_ 321 YLYNHIGECIGLAPTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTRPVEVYREAV 400 (412)
T ss_dssp HHHHHHTTSTTEEECCCCBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCHHHHHHHH
T ss_pred HHHHHHHHHCCCEECCCCCCEEEEEECCHHHCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEECCCHHHHHHHH
T ss_conf 99999987349254378971499995782343788899999999998699999966214899939999738999999999
Q ss_pred -----------E
Q ss_conf -----------8
Q 002647 518 -----------G 518 (897)
Q Consensus 518 -----------a 518 (897)
+
T Consensus 401 ~Rl~~~l~~~~~ 412 (412)
T d1bw0a_ 401 ERIKAFCQRHAA 412 (412)
T ss_dssp HHHHHHHHHHBC
T ss_pred HHHHHHHHHCCC
T ss_conf 999999986179
|
| >d1rxxa_ d.126.1.4 (A:) Arginine deiminase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Pentein, beta/alpha-propeller superfamily: Pentein family: Arginine deiminase domain: Arginine deiminase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=0 Score=31109.62 Aligned_cols=1 Identities=0% Similarity=-0.028 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~v~sE~g~Lk~Viv~~Pg~e~~~l~p~~~~~~lf~~~~~~~~a~~eh~~f~~~L~~~Gv~V~~l~~~l~e~~~~~~~ 80 (412)
T d1rxxa_ 1 TKLGVHSEAGKLRKVMVCSPGLAHQRLTPSNCDELLFDDVIWVNQAKRDHFDFVTKMRERGIDVLEMHNLLTETIQNPEA 80 (412)
T ss_dssp CCSEECCSSSCEEEEEECCCCHHHHTCCTTTTGGGTCSCCCCHHHHHHHHHHHHHHHHTTTCEEEEHHHHHHHHTTSHHH
T ss_pred CCCCCCCCCCCCEEEEECCCCHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCHHH
T ss_conf 97753777100007896698388773690015664367788999999999999999997798899705768877349588
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~plpn~~F~R 160 (412)
T d1rxxa_ 81 LKWILDRKITADSVGLGLTSELRSWLESLEPRKLAEYLIGGVAADDLPASEGANILKMYREYLGHSSFLLPPLPNTQFTR 160 (412)
T ss_dssp HHHHHHHHSCHHHHCTTTHHHHHHHHHTSCHHHHHHHHHHCEEGGGSCSCHHHHHHHHHHHHSCCCCEEECCCGGGGCTT
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHEECC
T ss_conf 99999875032334655899999998708989999998626421003444332112211000356533578862121315
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 D~~~~i~~gvii~~m~~~~R~~E~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~EGGDvl~~g~~~l~~g~s~RTn 240 (412)
T d1rxxa_ 161 DTTCWIYGGVTLNPMYWPARRQETLLTTAIYKFHPEFANAEFEIWYGDPDKDHGSSTLEGGDVMPIGNGVVLIGMGERSS 240 (412)
T ss_dssp TTEEECSSEEEECCCSSGGGHHHHHHHHHHHHHCHHHHTSCCEEEECCTTSCCTTCCCCGGGEEEEETTEEEEEESSSSC
T ss_pred CCCCEECCCEEECCCCCHHHCCCHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCC
T ss_conf 77534669789668997365436799999998580220576310147655547766042560899679689999431050
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~gi~~L~~~l~~~~~~~~v~~~~~p~~~~~~HLDt~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (412)
T d1rxxa_ 241 RQAIGQVAQSLFAKGAAERVIVAGLPKSRAAMHLDTVFSFCDRDLVTVFPEVVKEIVPFSLRPDPSSPYGMNIRREEKTF 320 (412)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEEECCC--CCCCHHHHEEEEETTEEEECHHHHTTCEEEEEEECTTSTTSEEEEECSSCH
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEECCCEEEECCCCEEEEEHHHCCCCCCEEEECCCCCCCCCEEECCCCCH
T ss_conf 99999999986642806775502678765420025427751798599831242754430442156655551010254317
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~l~~~l~~~~~~~i~~~~d~~~~~~e~~~~~~N~L~l~p~~Vi~~~~~~~~~~~L~~~Gi~vi~v~~~el~~~gGg~h 400 (412)
T d1rxxa_ 321 LEVVAESLGLKKLRVVETGGNSFAAEREQWDDGNNVVCLEPGVVVGYDRNTYTNTLLRKAGVEVITISASELGRGRGGGH 400 (412)
T ss_dssp HHHHHHHTTCSCCEEEECCCSCC--CCSSCCCCCCCEEEETTEEEEETTCHHHHHHHHHTTCEEEEECCTTTTSSSCCTT
T ss_pred HHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCEEEEECCCEEEEECCCHHHHHHHHHCCCEEEEECHHHHHCCCCCCE
T ss_conf 89999971898707955798525555666406520899679989984889999999997899899966567413798867
Q ss_pred -----------E
Q ss_conf -----------8
Q 002647 518 -----------G 518 (897)
Q Consensus 518 -----------a 518 (897)
-
T Consensus 401 C~T~pl~Re~i~ 412 (412)
T d1rxxa_ 401 CMTCPIVRDPID 412 (412)
T ss_dssp TTCEEEEECCCC
T ss_pred ECCCCCCCCCCC
T ss_conf 887034627999
|
| >d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aspartate aminotransferase, AAT species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]
Probab=100.00 E-value=0 Score=31108.40 Aligned_cols=1 Identities=0% Similarity=-0.527 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~s~~~~~~~~~~~~i~~l~~~~~~d~~~~~Inl~iG~~~d~~g~~~~~~~V~~a~~~~~~~~~~~~~Y~p~~G~p~lr 80 (412)
T d1ajsa_ 1 APPSVFAEVPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFR 80 (412)
T ss_dssp CCCCTTTTCCCCCCCHHHHHHHHHHTCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHH
T ss_pred CCCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
T ss_conf 99584440876899769999999836899996884178875888999886899999999973787688889977789999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 eaia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~G~~~v~~~~~ 160 (412)
T d1ajsa_ 81 TCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRY 160 (412)
T ss_dssp HHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEEC
T ss_pred HHHHHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCEEEEEECC
T ss_conf 99999985157843245662230365305678899999988764047998989994786331689999859927874223
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~d~~~~~~~~~~~~~~~~~il~~~P~NPTG~v~s~e~~~~i~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~ 240 (412)
T d1ajsa_ 161 WDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAI 240 (412)
T ss_dssp EETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHH
T ss_pred CCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECHHHHHHHCCCCCCCHHHH
T ss_conf 36233554378999999725677389995589998687899999999999986389789830765654059865651566
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~s~sk~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (412)
T d1ajsa_ 241 RYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWT 320 (412)
T ss_dssp HHHHHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHH
T ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHH
T ss_conf 65444124321234663223577777345445616788999999999998631535641689999999853888899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~~~~~~~l~~~r~~l~~~L~~~~~~~~~~~i~~~~G~F~~~~ls~~~v~~L~~e~gV~~vpg~Ri~~ag~~~~~i~~~ 400 (412)
T d1ajsa_ 321 GNVKTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLNPKQVEYLINQKHIYLLPSGRINMCGLTTKNLDYV 400 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCCCHHHHHHHHHTTCEECCTTSEEEGGGCCTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHCCEEEECCCEEEECCCCHHHHHHH
T ss_conf 99999999999999999999998489887036658975798459899999999985999981898688336988889999
Q ss_pred -----------E
Q ss_conf -----------8
Q 002647 518 -----------G 518 (897)
Q Consensus 518 -----------a 518 (897)
-
T Consensus 401 a~aI~~av~~~~ 412 (412)
T d1ajsa_ 401 ATSIHEAVTKIQ 412 (412)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHHHCC
T ss_conf 999999999639
|
| >d1ufaa2 c.6.2.4 (A:1-412) Hypothetical protein TT1467, N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: 7-stranded beta/alpha barrel superfamily: Glycoside hydrolase/deacetylase family: AmyC N-terminal domain-like domain: Hypothetical protein TT1467, N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=31109.47 Aligned_cols=1 Identities=0% Similarity=-1.655 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~lalvlH~HqP~vr~~~~~~~~e~w~~~a~~e~YlPll~~~~~l~~~~~~~k~t~~lsP~LleqL~D~~l~~~f~~~l 80 (412)
T d1ufaa2 1 MARFALVLHAHLPYVRAHGMWPFGEETLYEAMAETYLPLIRVLERLRAEGVEAPFTLGITPILAEQLADARIKEGFWAYA 80 (412)
T ss_dssp CEEEEEEEEECCCCCTTSCSTTTSHHHHHHHHHHTHHHHHHHHHHHHHTTCCCCEEEEECHHHHHHHTCHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHCHHHHHHHHHHH
T ss_conf 96379998257876568987874245999999998888999999998428983399997789999850878888889999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~r~L~~~G~vEl~~~~y~H~ilpll~~~~~~~~ 160 (412)
T d1ufaa2 81 KDRLERAQGDYQRYRGTALEASARHQVAFWELTLDHFQRLSGDLVAAFRKAEEGGQVELITSNATHGYSPLLGYDEALWA 160 (412)
T ss_dssp HHHHHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHTSEEEEEECTTCBCGGGCSCHHHHHH
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCCCHHHHHH
T ss_conf 99998750556532340667888888999999999999965458999999997598688835412333321796799999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 Qi~~~~~~~~~~fG~~P~G~W~~E~a~s~~~l~~~~~~g~~~~~~~gl~~iL~~~Gi~y~~~d~~~l~~~~~~~~~~~~~ 240 (412)
T d1ufaa2 161 QIKTGVSTYRRHFAKDPTGFWLPEMAYRPKGPWKPPVEGPPEGVRPGVDELLMRAGIRYTFVDAHLVQGGEPLSPYGEAA 240 (412)
T ss_dssp HHHHHHHHHHHHHSSCCCBEECGGGCBCCSEEECCSSSSSCCEEECCHHHHHHHTTCCEEEECHHHHHCSCCCCC-----
T ss_pred HHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEECHHHHHCCCCCCCCCCCC
T ss_conf 99999999999759998867674222044113433321442102452889999739978997749985078766555556
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~y~~~~~~~~v~~ffRD~~lSd~I~~~~~Gf~~~~~~~e~a~~d~~~~l~~~r~t~~~~~~~~~~~~Dgen 320 (412)
T d1ufaa2 241 LGPVESQEATYHVHELESGLRVLARNPETTLQVWSADYGYPGEGLYREFHRKDPLSGLHHWRVTHRKADLAEKAPYDPEA 320 (412)
T ss_dssp ---CCCCGGGGSCEECTTSCEEEEBCHHHHHHHHCTTTSGGGSTTSBCSSCCCTTTCCCCEECCCSSCCGGGCEECCHHH
T ss_pred CCCCCCCCCCEEEECCCCEEEEEECCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
T ss_conf 67533345650330489738999668777546332326988765356665221334489987113467855361068899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 awe~~~~~a~~Fl~~l~~~~~~~~~~ivv~~~D~ElFGhww~eg~~fL~~l~~~l~~~~~i~~tT~se~l~~p~~~v~lp 400 (412)
T d1ufaa2 321 AFAKTEEHARHFVGLLERLAGRHPEGVILSPYDAELFGHWWYEGVAWLEAVLRLLAQNPKVRPVTAREAVQGPAVRTALP 400 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGBTTTBTTHHHHHHHHHHHHHTCSSEEECCHHHHTCSCCEECCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHCCCCEEECC
T ss_conf 99998977999999999875058887589445588604024310999999999863189839976999982889714258
Q ss_pred -----------E
Q ss_conf -----------8
Q 002647 518 -----------G 518 (897)
Q Consensus 518 -----------a 518 (897)
+
T Consensus 401 ~sSWg~gg~~~v 412 (412)
T d1ufaa2 401 EGSWGRGGDHRV 412 (412)
T ss_dssp SBCSSGGGSSTT
T ss_pred CCCCCCCCCCCC
T ss_conf 988767898889
|
| >d1t3ca_ d.92.1.7 (A:) Botulinum neurotoxin {Clostridium botulinum, serotype E [TaxId: 1491]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Clostridium neurotoxins, catalytic domain
domain: Botulinum neurotoxin
species: Clostridium botulinum, serotype E [TaxId: 1491]
Probab=100.00 E-value=0 Score=31039.30 Aligned_cols=1 Identities=0% Similarity=-0.957 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~InnFNyndPVnn~~I~~~r~~~~~~~~KAFkI~~nIWViPER~~~~t~p~d~~pp~~~~~~d~~yYDpnyLsTD~EKD 80 (411)
T d1t3ca_ 1 PKINSFNYNDPVNDRTILYIKPGGCQEFYKSFNIMKNIWIIPERNVIGTTPQDFHPPTSLKNGDSSYYDPNYLQSDEEKD 80 (411)
T ss_dssp CCCCCCCTTSCCCSSSEEEEECTTCSSCEEEEEEETTEEEEEEECCTTCCGGGGSCSCSTTTTSSCCBCTTTTCSHHHHH
T ss_pred CCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHH
T ss_conf 97666667898899728999448899712435620776875111247778212489732346887513753145621788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~FLk~iIKLf~RINs~~~G~~LL~~Is~aiPf~G~~~t~~~ef~~~~~~~~n~~~s~~~~~~~~~NlvIfGPg~nI~en~ 160 (411)
T d1t3ca_ 81 RFLKIVTKIFNRINNNLSGGILLEELSKANPYLGNDNTPDNQFHIGDASAVEIKFSNGSQDILLPNVIIMGAEPDLFETN 160 (411)
T ss_dssp HHHHHHHHHHHHHTTSHHHHHHHHHHHTCCCCSCCTTSCTTSCCCCTTTCEEEECTTSCEEEECCSEEEEECCSBTTCCE
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCEEEEECCCCCHHHEEEEEEEECCCCCCCCCC
T ss_conf 99999999999863745799999999736875789999853311355430356336885201310269987885425665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~n~~~s~nGfGt~~~i~F~P~~t~~f~~~~~~~F~~DPAl~L~heLIhsLh~LYGIk~i~~~~~i~~~~~~~~ 240 (411)
T d1t3ca_ 161 SSNISLRNNYMPSNHGFGSIAIVTFSPEYSFRFNDNSMNEFIQDPALTLMHQLIHSLHGLYGAKGITTKYTITQKQNPLI 240 (411)
T ss_dssp EEECCCGGGCCGGGTTSCCCEEEECCTTEEEEEECTTSCEEECCHHHHHHHHHHHHHHHHTTCCTTTTTCEECTTTTTCC
T ss_pred CEEEEECCCCCHHHCCCCEEEEEEECCCEEEEECCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
T ss_conf 03787405776322476504799976634786136777714248899999999999987618667887642101000556
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~v~~eelltfGG~D~~~I~t~~~~~~~~~~l~~f~~ia~~l~~i~~~n~~~n~yK~~~~~Ky~~~~d~~g~~~vN~ 320 (411)
T d1t3ca_ 241 TNIRGTNIEEFLTFGGTDLNIITSAQSNDIYTNLLADYKKIASKLSKVQVSNPLLNPYKDVFEAKYGLDKDASGIYSVNI 320 (411)
T ss_dssp SCTTCEEHHHHHHHCGGGGGGSCHHHHHHHHHHHHHHHHHHHHHHHTSCCSCGGGHHHHHHHHHHTTEEECTTSCEEECH
T ss_pred HCCCCCCCEEEEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEH
T ss_conf 41477554000300687800048711677999999999999999888627884178999999998577657887288548
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~kF~~~y~~l~~fTE~~~~~~f~v~~r~~Y~~~y~~~~~~nlldd~iYti~eGFNi~nl~~n~~GQN~~~N~~~~~~i~~ 400 (411)
T d1t3ca_ 321 NKFNDIFKKLYSFTEFDLATKFQVKCRQTYIGQYKYFKLSNLLNDSIYNISEGYNINNLKVNFRGQNANLNPRIITPITG 400 (411)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHTCCCCSCSCSCCCEEEESCTTCTTTCBTTTBTCCGGGGGGGGGGBTTTSGGGEECCTT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC
T ss_conf 99999999986223344668886887776886357632255467653221467433432001367653238465346785
Q ss_pred ----------E
Q ss_conf ----------8
Q 002647 518 ----------G 518 (897)
Q Consensus 518 ----------a 518 (897)
+
T Consensus 401 ~glv~~~~~~C 411 (411)
T d1t3ca_ 401 RGLVKKIIRFC 411 (411)
T ss_dssp TTHHHHHSSCC
T ss_pred CHHHHHHHHCC
T ss_conf 20588776339
|
| >d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: N-acylglucosamine (NAG) epimerase domain: Putative NAG isomerase YihS species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=0 Score=31037.85 Aligned_cols=1 Identities=0% Similarity=1.068 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~~~~~~r~wL~~~~~~l~~~~~~~~~~gGF~~l~~dG~~~~~~~k~~~~~aR~~~~fs~a~~~g~~~~~~~A~~g~~f 80 (411)
T d2afaa1 1 KWFNTLSHNRWLEQETDRIFNFGKNAVVPTGFGWLGNKGQIKEEMGTHLWITARMLHVYSVAASMGRPGAYDLVDHGIKA 80 (411)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHGGGEETTEECCBCTTSCBCGGGCEEHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 97687777899999999999864617789972346899897888772147768999999999975897799999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 L~~~~~d~~~Gg~~~~~~~~~~~d~~k~~Y~~AF~l~ala~~~~~g~~~~~~~a~~~~~~l~~~~~~~~~G~~~~~~~~~ 160 (411)
T d2afaa1 81 MNGALRDKKYGGWYACVNDQGVVDASKQGYQHFFALLGAASAVTTGHPEARKLLDYTIEVIEKYFWSEEEQMCLESWDEA 160 (411)
T ss_dssp TTTTTBCTTTSSBCSEECSSSEEECCEEHHHHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTT
T ss_pred HHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCC
T ss_conf 99856767998489862699986532104889999999999988588889999999999999996075689743220555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~n~~mhl~eA~~~l~~at~d~~~~~~a~~~~~~~~~~~~~~~~~~l~E~f~~dw~~~~~~~~~~~~~~~~~ 240 (411)
T d2afaa1 161 FSQTEDYRGGNANMHAVEAFLIVYDVTHDKKWLDRALRIASVIIHDVARNGDYRVNEHFDSQWNPIRDYNKDNPAHRFRA 240 (411)
T ss_dssp SCCBCSCEEHHHHHHHHHHHHHHHHTTCCTHHHHHHHHHHHHHCCCCCGGGTTCCCCEECTTCCBCTTTTTTCTTCCTTC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHCCCCCCCCCC
T ss_conf 67754424467448999999999884288999999999999888765156678411112666541443301264324564
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~pGH~iE~aWlll~~~~~~~~~~~~~~~~~l~~A~~l~~~~~~~g~d~d~~gg~~~~~~~~g~~~~~~k~~W~qaEa 320 (411)
T d2afaa1 241 YGGTPGHWIEWGRLMLHLHAALEARFETPPAWLLEDAKGLFHATIRDAWAPDGADGFVYSVDWDGKPIVRERVRWPIVEA 320 (411)
T ss_dssp SSBCHHHHHHHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHBSCSSSSSBCSCBCTTSCBSSCCEEHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHH
T ss_conf 33474138899999999999973134567299999999999999985726578980584015899967777455599999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 i~a~l~ly~~tgd~~yl~~a~~~~~~~~~~f~D~~~G~W~~~l~~~g~p~~~~~~g~~~~yH~~~a~~~~~~~~~~~~~~ 400 (411)
T d2afaa1 321 MGTAYALYTLTDDSQYEEWYQKWWDYCIKYLMDYENGSWWQELDADNKVTTKVWDGKQDIYHLLHCLVIPRLPLAPGLAP 400 (411)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBCTTTSSBCSEECTTSCBCC----CCCCCTTTHHHHTGGGSCSSSCHHH
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHH
T ss_conf 99999999866989999999999999998687999983464589997998888999987206999998615889974218
Q ss_pred ----------E
Q ss_conf ----------8
Q 002647 518 ----------G 518 (897)
Q Consensus 518 ----------a 518 (897)
+
T Consensus 401 ~~~~~~~~~~~ 411 (411)
T d2afaa1 401 AVAAGLLDINA 411 (411)
T ss_dssp HHHTTCTTTTC
T ss_pred HHHCCCCCCCC
T ss_conf 88701346689
|
| >d1ux5a_ a.207.1.1 (A:) Bni1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Formin homology 2 domain (FH2 domain) superfamily: Formin homology 2 domain (FH2 domain) family: Formin homology 2 domain (FH2 domain) domain: Bni1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=31032.74 Aligned_cols=1 Identities=0% Similarity=0.437 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~PkP~~klK~l~W~ki~~~~~tiW~~i~~~~~~~~~~~~~~~~~le~~F~~k~~~~~~~~~~~~~~~~~lLd~kr~qni 80 (411)
T d1ux5a_ 1 KYPRPHKKLKQLHWEKLDCTDNSIWGTGKAEKFADDLYEKGVLADLEKAFAAREIKSLASKRKEDLQKITFLSRDISQQF 80 (411)
T ss_dssp CCCCCSSCBCCCCCCCCSSCCSSSCCSSHHHHHHHHHHHTTHHHHHHHHTBSSCCHHHHHHHHHTTTSBCCSCHHHHHHH
T ss_pred CCCCCCCCCCCCCCEECCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 96989999989776159998988200204410036788663099999986447777776666666662001767899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~I~L~~~~~~s~~~i~~ai~~~d~~~l~~~~l~~ll~~~~~~~~~~~~l~~~lPt~eE~~~l~~~~~~~~~~~d~~~L~~ 160 (411)
T d1ux5a_ 81 GINLHMYSSLSVADLVKKILNCDRDFLQTPSVVEFLSKSEIIEVSVNLARNYAPYSTDWEGVRNLEDAKPPEKDPNDLQR 160 (411)
T ss_dssp HHHTGGGTTSCHHHHHHHHHTTTHHHHTCHHHHHHTTCHHHHCCCHHHHHHTGGGCCCCTTCCCGGGCCCCSSCSTTBCH
T ss_pred HHHHHHCCCCCHHHHHHHHHHCCHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHCCH
T ss_conf 89998706999999999998368542487899999830210134799999817993789999999851445478454387
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~Eqf~~~l~~~~i~~~~~Rl~~~~f~~~f~~~~~~l~~~l~~l~~a~~~l~~S~~l~~lL~~iL~~GN~lN~g~~~A~GF 240 (411)
T d1ux5a_ 161 ADQIYLQLMVNLESYWGSRMRALTVVTSYEREYNELLAKLRKVDKAVSALQESDNLRNVFNVILAVGNFMNDTSKQAQGF 240 (411)
T ss_dssp HHHHHHHTTTTTTTTHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSCGGGCCSCC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCEE
T ss_conf 99999999862334499999999999999999999999999999999999957679999999999860625899871235
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 kL~sL~kL~d~Ks~d~~~tLL~yiv~~~~~~~p~l~~~~~el~~v~~a~~~~~~~l~~~~~~L~~~l~~i~~~~~~~~~~ 320 (411)
T d1ux5a_ 241 KLSTLQRLTFIKDTTNSMTFLNYVEKIVRLNYPSFNDFLSELEPVLDVVKVSIEQLVNDCKDFSQSIVNVERSVEIGNLS 320 (411)
T ss_dssp CGGGGGGSSSCBCTTSCSBHHHHHHHHHHHHCGGGGGHHHHTHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHSTTT
T ss_pred EHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 23898876521179998018999999999869075332877888998861899999999999999999999999862025
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~~~~~~d~f~~~~~~fl~~~~~~~~~l~~~~~~~~~~~~~~~~yfGEd~~~~~~~~~fF~~~~~F~~~~~~a~~en~~ 400 (411)
T d1ux5a_ 321 DSSKFHPLDKVLIKTLPVLPEARKKGDLLEDEVKLTIMEFESLMHTYGEDSGDKFAKISFFKKFADFINEYKKAQAQNLA 400 (411)
T ss_dssp CTTSSCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 40002511169999999999999999999999999999999999983899888789999999999999999999999999
Q ss_pred ----------E
Q ss_conf ----------8
Q 002647 518 ----------G 518 (897)
Q Consensus 518 ----------a 518 (897)
-
T Consensus 401 ~~e~e~~~~k~ 411 (411)
T d1ux5a_ 401 AEEEERLYIKH 411 (411)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHCCC
T ss_conf 99999987209
|
| >d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cytochrome p450 152a1 (Bs-beta) species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=0 Score=31027.12 Aligned_cols=1 Identities=0% Similarity=-0.659 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 p~~~~~~~~l~~~~~~~~f~~~~~~kyg~~if~~~~~g~~~vvv~~pe~i~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~ 80 (411)
T d1izoa_ 1 PHDKSLDNSLTLLKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFYDTDRFQRQNALPKRVQKSLFGVNAIQ 80 (411)
T ss_dssp CBCCCTTHHHHHHHHGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHTCTTTEECTTCSCHHHHTTTTCTTCGG
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECHHHHHHHHCCCCCEECCCCCHHHHHHHCCCCCCC
T ss_conf 98997014999997799999999999799769999889528999799999999769997113777287777644899645
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~dg~~h~~~R~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~l~~~v~~~~~g~~~~~~~~~~~~~~ 160 (411)
T d1izoa_ 81 GMDGSAHIHRKMLFLSLMTPPHQKRLAELMTEEWKAAVTRWEKADEVVLFEEAKEILCRVACYWAGVPLKETEVKERADD 160 (411)
T ss_dssp GCCHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHTTSSEEEHHHHHHHHHHHHHHHHHTCCCCTTTHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf 77808999999999873199999999999999999999985425751299999999998888874887647999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~k~~~a~~~~~~~~~~~i~~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~ag~~ 240 (411)
T d1izoa_ 161 FIDMVDAFGAVGPRHWKGRRARPRAEEWIEVMIEDARAGLLKTTSGTALHEMAFHTQEDGSQLDSRMAAIELINVLRPIV 240 (411)
T ss_dssp HHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCTTSHHHHHHHCBCTTSCBCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC
T ss_conf 99999876321310399999999999999999998621224586322899999986751775311013456665320332
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 tts~~l~~~l~~L~~~P~vq~kl~~e~~~~l~a~i~E~lRl~p~~~~~~r~~~~d~~i~g~~ipkgt~V~~~~~~~~~dp 320 (411)
T d1izoa_ 241 AISYFLVFSALALHEHPKYKEWLRSGNSREREMFVQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDP 320 (411)
T ss_dssp THHHHHHHHHHHHHHSTHHHHHHHTCCHHHHHHHHHHHHHHSCCCCEEEEEECSCEEETTEEECTTCEEEEEHHHHHTCT
T ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHCCC
T ss_conf 30288999999987310123221001330499999999986503322344333334431043464221101355530442
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~~~p~~F~PeR~~~~~~~~~~~~pFg~G~~~~~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~ 400 (411)
T d1izoa_ 321 RLWDHPDEFRPERFAEREENLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQSLHYSLARMPSLPE 400 (411)
T ss_dssp TTSSSTTSCCGGGGTTCCCCSSSCCTTCSSCTTSSSCCTTHHHHHHHHHHHHHHHHHTEEEECCSCCCCCCSSSSSCCCT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCC
T ss_conf 00899562186535899999776479899899988088439999999999999999826898179986887255377568
Q ss_pred ----------E
Q ss_conf ----------8
Q 002647 518 ----------G 518 (897)
Q Consensus 518 ----------a 518 (897)
-
T Consensus 401 ~~~~~~~~~Rr 411 (411)
T d1izoa_ 401 SGFVMSGIRRK 411 (411)
T ss_dssp TCCEEEEEEEC
T ss_pred CCCEEEEEECC
T ss_conf 99079988693
|
| >d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme-dependent peroxidases superfamily: Heme-dependent peroxidases family: Catalase-peroxidase KatG domain: Catalase-peroxidase KatG species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=0 Score=30962.96 Aligned_cols=1 Identities=0% Similarity=-0.925 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~wwp~~~~~~~l~~~~~~~~p~~~~f~y~~~~~~ld~~a~~~d~~~l~~~s~~wwpaD~G~ygP~lVRl 80 (410)
T d2ccaa1 1 MKYPVEGGGNQDWWPNRLNLKVLHQNPAVADPMGAAFDYAAEVATIDVDALTRDIEEVMTTSQPWWPADYGHYGPLFIRM 80 (410)
T ss_dssp CCCGGGTCCGGGTSTTCCCGGGGSCSCGGGCTTCTTCCHHHHHTTCCHHHHHHHHHHHHTSCCTTSCCGGGCCHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
T ss_conf 98987899766628644587555148877899999862899986269999999999998544335765456633001100
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 AWHsAGTYR~~DgRGGanGg~iRfaPe~sWp~N~~LdkAr~LL~piK~ky~~~iS~ADLi~LAG~vAiE~mGg~~i~f~~ 160 (410)
T d2ccaa1 81 AWHAAGTYRIHDGRGGAGGGMQRFAPLNSWPDNASLDKARRLLWPVKKKYGKKLSWADLIVFAGNCALESMGFKTFGFGF 160 (410)
T ss_dssp HHHHHTTCCTTTCCCSSTTCGGGSTTGGGCGGGTTHHHHHHTTHHHHHHHGGGSCHHHHHHHHHHHHHHHTTCCCSCCCB
T ss_pred HHHHHCEEECCCCCCCCCCCEECCCHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCEECCEECCCCCCCCC
T ss_conf 22331301212677899877466541115312231899999988888760546567660336350210141255112455
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 GR~D~~~~~~~~~g~~~~~~~~~R~~~~~el~d~l~~~~m~li~~np~g~~g~pd~~~~a~~lRd~f~rMglnD~E~VAL 240 (410)
T d2ccaa1 161 GRVDQWEPDEVYWGKEATWLGDERYSGKRDLENPLAAVQMGLIYVNPEGPNGNPDPMAAAVDIRETFRRMAMNDVETAAL 240 (410)
T ss_dssp CCCCCSSCCCCCCCSCSSTTCCCCEETTTEECTTCCSSSTTCSSSCTTSGGGCCCHHHHHHHHHHHHHTTTCCHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH
T ss_conf 54435544200378866377899857632456754444458767787534689871017999999998706871766533
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 iaGgHtlGk~Hg~~~~~~~g~~p~~a~~~~~G~g~~~~~~~~~~~~~~~sG~eg~WT~~P~~~dN~yF~~Ll~~~we~~k 320 (410)
T d2ccaa1 241 IVGGHTFGKTHGAGPADLVGPEPEAAPLEQMGLGWKSSYGTGTGKDAITSGIEVVWTNTPTKWDNSFLEILYGYEWELTK 320 (410)
T ss_dssp HHHHHTSCCCCBSSCGGGBCCCGGGSCGGGTTCCCCBCSTTSSGGGCBSSSCCCCCCSCTTSCSSHHHHHHHHSCEEEEE
T ss_pred HCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEECC
T ss_conf 12421113346788734257784658702157755688787778555367865547668514535777541356515214
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 sp~g~~qw~~~d~~~~~~~pda~~~~~~~~~ml~tDlaL~~Dp~~r~iae~ya~d~d~F~~dFa~AW~KL~hrDmgp~~r 400 (410)
T d2ccaa1 321 SPAGAWQYTAKDGAGAGTIPDPFGGPGRSPTMLATDLSLRVDPIYERITRRWLEHPEELADEFAKAWYKLIHRDMGPVAR 400 (410)
T ss_dssp CTTSCEEEEEGGGTTTTCBCCTTSCCCBCCEECHHHHHHHHSHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTSCSGGG
T ss_pred CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHH
T ss_conf 45655310355777777777776776678764226677520987899999997099999999999999986125796342
Q ss_pred ---------E
Q ss_conf ---------8
Q 002647 518 ---------G 518 (897)
Q Consensus 518 ---------a 518 (897)
-
T Consensus 401 ~~g~~~p~e~ 410 (410)
T d2ccaa1 401 YLGPLVPKQT 410 (410)
T ss_dssp CBSTTCCSCC
T ss_pred CCCCCCCCCC
T ss_conf 0689999889
|
| >d1p1ja1 c.2.1.3 (A:9-322,A:438-533) Myo-inositol 1-phosphate synthase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Myo-inositol 1-phosphate synthase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=30960.69 Aligned_cols=1 Identities=0% Similarity=-2.254 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~v~s~~~~y~~~~i~~~y~y~~t~v~~~~~g~~~v~p~~~~~~f~t~~~~p~klGVmlVG~GGnngTT~~aGv~An 80 (410)
T d1p1ja1 1 ITSVKVVTDKCTYKDNELLTKYSYENAVVTKTASGRFDVTPTVQDYVFKLDLKKPEKLGIMLIGLGGNNGSTLVASVLAN 80 (410)
T ss_dssp CCEEEECCTTEEEETTEEEEEEEEEEEEEEECTTSEEEEEEEEEEEEEEEECCCCSSEEEEEETTTSHHHHHHHHHHHHH
T ss_pred CCCEEEECCCEEECCCEEEEEEEECCEEEEECCCCEEEEEEEEEEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 96569828980773411799988510389976897089987567789994256786478998417852899999999997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 k~gl~w~tk~G~~~pny~GSltq~stirlG~~~~g~~~~~p~kd~lPl~~p~DiVfGGWDI~~~nl~eAa~rA~VLd~~l 160 (410)
T d1p1ja1 81 KHNVEFQTKEGVKQPNYFGSMTQCSTLKLGIDAEGNDVYAPFNSLLPMVSPNDFVVSGWDINNADLYEAMQRSQVLEYDL 160 (410)
T ss_dssp HTTCCEEETTEEECCCCTTCHHHHCEEEEEECTTSCEEEEEGGGSSCCCCGGGEEEEEECSSCCCHHHHHHHHTCSCHHH
T ss_pred HCCCCCCCCCCCCCCCCCCCEEEECEEECCCCCCCCCCCCCHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHCCCCCHHH
T ss_conf 62786333556546763230210031431455788845663776188898412789245699988999998769999899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 l~ql~~~L~~i~P~psV~~~dfiaanq~~ra~nvi~~d~~~~~~~~sk~e~ve~Ir~DIr~Fk~~n~lDrVVVlWtASTE 240 (410)
T d1p1ja1 161 QQRLKAKMSLVKPLPSIYYPDFIAANQDERANNCINLDEKGNVTTRGKWTHLQRIRRDIQNFKEENALDKVIVLWTANTE 240 (410)
T ss_dssp HHHHHHHHTTCCCBCBCCCGGGSCGGGGGGCCCBSCBCTTSCBCSCCHHHHHHHHHHHHHHHHHHTTCSCEEEEECSCCC
T ss_pred HHHHHHHHHCCCCCCCEECCHHHHCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
T ss_conf 99999998638634320060555212112102322456545546655899999999999999987389748999458887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 r~~~~~p~v~~t~e~l~~ai~~n~~eIsPS~lYA~AAI~eG~pyvNgsPq~t~vPal~eLA~~~gv~iaG~DfKdslLA~ 320 (410)
T d1p1ja1 241 RYVEVSPGVNDTMENLLQSIKNDHEEIAPSTIFAAASILEGVPYINGSPQNTFVPGLVQLAEHEGTFIAGDDLKDSLLAT 320 (410)
T ss_dssp CCCCCCTTTTSSHHHHHHHHHTTCTTCCHHHHHHHHHHHTTCCEEECSCSCCCCHHHHHHHHHHTCCEEESSBCHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCHHHHHHHH
T ss_conf 68888832124399999887559987787999999999739984468864456579999984279458715124322345
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 pli~dL~vl~e~~trI~~~~dg~vl~d~~~f~~~~~Vls~Lsyl~KAPl~p~g~~vvnal~~Qr~~len~~ra~~Gl~p~ 400 (410)
T d1p1ja1 321 PLIIDLLVMTEFCTRVSYKKVDPVKEDAGKFENFYPVLTFLSYWLKAPLTRPGFHPVNGLNKQRTALENFLRLLIGLPSQ 400 (410)
T ss_dssp HHHHHHHHHHHHHHTEEEEECBTTBTTCSCCBCCCSBCGGGGGGBSSCCCCTTCCCCCCHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHEEEEEECCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 89999999887650368621765457622162153089898887538989999965016888999999999997289986
Q ss_pred ---------E
Q ss_conf ---------8
Q 002647 518 ---------G 518 (897)
Q Consensus 518 ---------a 518 (897)
.
T Consensus 401 ~~m~le~~l~ 410 (410)
T d1p1ja1 401 NELRFEERLL 410 (410)
T ss_dssp CCCCHHHHCC
T ss_pred CCCEEEEECC
T ss_conf 6651146329
|
| >d1kfsa2 e.8.1.1 (A:519-928) DNA polymerase I (Klenow fragment) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: DNA/RNA polymerases superfamily: DNA/RNA polymerases family: DNA polymerase I domain: DNA polymerase I (Klenow fragment) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=30956.74 Aligned_cols=1 Identities=0% Similarity=-0.261 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~g~~~~~~~iE~~~~~~la~Me~~Gi~vD~e~l~~~~~~~~~~~~~l~~~~~~~~g~~fn~~S~~ql~~~Lf~~lgl~~ 80 (410)
T d1kfsa2 1 HKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKP 80 (410)
T ss_dssp CHHHHHHHHHTHHHHHHHHHHHHHHCBCBCHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCSCTTTTSHHHHTTTSSCSC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf 99689999999988999999999739898899999999999999999999999995990899999999999997429998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~t~~g~~~t~~~~L~~~~~~~~~~~~l~~~r~~~k~~~~~~~~~~~~~~~~~gri~~~~~~~gt~TGR~s~s~pnlQn 160 (410)
T d1kfsa2 81 LKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQN 160 (410)
T ss_dssp CCCCC----TTTCCHHHHHTTTCHHHHHHHHHHHHHHHHHHTTTTGGGGBCTTTSSBCCEEESSCCSSSCCEEESSCGGG
T ss_pred CCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEECCCCCCCCCCCC
T ss_conf 76478898554055410112223899999999999999887652433125778995412575124200232136863035
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~P~~~~~~~~iR~~fia~~G~~lv~~D~sqiE~Rv~A~ls~D~~l~~~~~~g~D~h~~~A~~~~~~~~~~~~~~~R~~aK 240 (410)
T d1kfsa2 161 IPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAK 240 (410)
T ss_dssp SCSSSHHHHHHHTTBBCCTTEEEEEEEETTHHHHHHHHHTTCHHHHHHHHTTCCHHHHHHHHHTTCCTTTCCHHHHHHHH
T ss_pred CCCCCCCCHHHHHEEECCCCCEEEEECHHHCCHHHEEEEEECCCHHHHHHCCCCHHHHHHHHHCCCCCHHCCCCHHHHHH
T ss_conf 78887423255632736999779985545384443444676224788885265067641999819973210220043320
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~g~~YG~G~~~la~~l~~s~~eA~~~~~~~~~~~p~i~~~~~~~~~~a~~~g~v~t~~Grr~~~~~~~~~~~~~r~~ 320 (410)
T d1kfsa2 241 AINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAA 320 (410)
T ss_dssp HHHHHHHTTCCHHHHHHHHTCCTTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSEEECTTCCEEECTTTTCSSHHHHHH
T ss_pred HEEEEHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCHHHHHHH
T ss_conf 31230141356778998809899999999999988787846899999999997595530368503699754405878888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~r~a~N~~iQg~aadi~k~a~~~i~~~l~~~~~~~~~v~~VHDEiv~ev~~~~~~~~~~~i~~~M~~~~~~~vPl~~e~ 400 (410)
T d1kfsa2 321 AERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEV 400 (410)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEEEETTEEEEEEETTTHHHHHHHHHHHHHHSSCSSSCCCEEE
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCEEEEC
T ss_conf 88888652013389999999999999999852899889998453258998389999999999999846456898468320
Q ss_pred ---------E
Q ss_conf ---------8
Q 002647 518 ---------G 518 (897)
Q Consensus 518 ---------a 518 (897)
=
T Consensus 401 ~~g~~w~e~h 410 (410)
T d1kfsa2 401 GSGENWDQAH 410 (410)
T ss_dssp EEESBHHHHC
T ss_pred CCCCCHHHHC
T ss_conf 5628868829
|
| >d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exomannosidase species: Cellvibrio mixtus [TaxId: 39650]
Probab=100.00 E-value=0 Score=30955.51 Aligned_cols=1 Identities=0% Similarity=-0.394 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~v~~~g~~f~~nG~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~l~~~k~~G~N~iR~~~~~~~~~~~~~~~~~~~~~ 80 (410)
T d1uuqa_ 1 EHFVRVNGGHFELQGKPYVITGVNMWYAAYLGAPNEVGDRDRLAKELDNLKAIGVNNLRVLAVSEKSEINSAVKPAVTNG 80 (410)
T ss_dssp CCCCEEETTEEEETTEEECEEEEECTTHHHHTCSSTTCCHHHHHHHHHHHHHTTCCEEEEECCCBCCCSTTSCSSCSBSS
T ss_pred CCCEEEECCEEEECCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 99879989999999989999999317765566567879999999999999977995999687366545555568776554
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~g~~de~gl~~~d~~l~~a~~~Gi~vi~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (410)
T d1uuqa_ 81 FGNYDETLLQGLDYLLVELAKRDMTVVLYFNNFWQWSGGMTQYMAWIEGEPVQDPNVTNEWEAFMAKSASFYRSEKAQQE 160 (410)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHTTCEEEEECCBSSSTTCHHHHHHHHHHTCCCCCHHHHCCHHHHHHHHHGGGGCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 33245889999999999999739856874034556657754465312477767655555553335665300368999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~l~NE~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dp~~~v~~~~~~~~~~ 240 (410)
T d1uuqa_ 161 YRKTLEKIITRVNSINGKAYVDDATIMSWQLANEPRPGNSQTTAEEKQIYIDWVHAAAAYIKTLDAHHLVSSGSEGEMGS 240 (410)
T ss_dssp HHHHHHHHHTCBCTTTCCBGGGCTTEEEEESCBSCCSCSTTCCHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCCSGGGT
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC
T ss_conf 99999999986546666765577067666533665776676543320346677777775455408995576424566666
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~D~~s~h~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kPv~i~E~G~~~~~~~~~ 320 (410)
T d1uuqa_ 241 VNDMQVFIDAHATPDIDYLTYHMWIRNWSWFDKTKPAETWPSAWEKAQNYMRAHIDVAKQLNKPLVLEEFGLDRDMGSYA 320 (410)
T ss_dssp TTCHHHHHHHHCSTTCCSEEEEECTTTTTSSCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECCCCGGGCCC
T ss_pred CCCCCCHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCC
T ss_conf 44321013440477655688612754446555433322222015666778888888876249976650255656788888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~d~~~~~~ 400 (410)
T d1uuqa_ 321 MDSTTEYRDNYFRGVFELMLASLEQGEPSAGYNIWAWNGYGRTTRANYWWQEGDDFMGDPPQEEQGMYGVFDTDTSTIAI 400 (410)
T ss_dssp TTSCCHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCEEETCCCCCTTCCCCTTSCCCSSCTTSCTTSSCEETTCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHH
T ss_conf 76468999999999999999999828998999995416878888887778779987798985347348998899748899
Q ss_pred ---------E
Q ss_conf ---------8
Q 002647 518 ---------G 518 (897)
Q Consensus 518 ---------a 518 (897)
-
T Consensus 401 ~~~~~~~~~~ 410 (410)
T d1uuqa_ 401 MKEFNARFQP 410 (410)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHHCCC
T ss_conf 9999974197
|
| >d1s5ja1 c.55.3.5 (A:40-449) Exonuclease domain of family B DNA polymerases {Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Ribonuclease H-like family: DnaQ-like 3'-5' exonuclease domain: Exonuclease domain of family B DNA polymerases species: Sulfolobus solfataricus [TaxId: 2287]
Probab=100.00 E-value=0 Score=30954.65 Aligned_cols=1 Identities=0% Similarity=-0.227 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~ll~~~Y~~~~~~~vi~~~g~~~~~~~v~~~~~gf~PYFyv~~~~~~~~~~~~~~~~~~~~~~e~v~k 80 (410)
T d1s5ja1 1 EWLEEAQENKIYFLLQVDYDGKKGKAVCKLFDKETQKIYALYDNTGHKPYFLVDLEPDKVGKIPKIVRDPSFDHIETVSK 80 (410)
T ss_dssp CCSCBCCTTCEEEEEEEEEETTTTEEEEEEEETTTTEEEEEECCSCCCCEEEESSCHHHHTTCHHHHTCTTEEEEEEEEE
T ss_pred CCCCCCCCCCCEEEEEEEEEEECCEEEEEEEEECCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEEE
T ss_conf 97655456875899986886329989999974269938999968896530899888216899998764236561799997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~ki~~~~p~~v~~~r~~~~~~~EadI~~~~RfliD~~l~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (410)
T d1s5ja1 81 IDPYTWNKFKLTKIVVRDPLAVRRLRNDVPKAYEAHIKYFNNYMYDIGLIPGMPYVVKNGKLESVYLSLDEKDVEEIKKA 160 (410)
T ss_dssp ECTTTCCEEEEEEEEESSHHHHHHHTTSSSCEESCSSCHHHHHHHHHTCCTTSEEEEETTEEEECCCCCCHHHHHHHHHH
T ss_pred EECCCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCHHCEEEECCCCCCEEEEECCCCCCCCCCCCCCCHHHHHCCC
T ss_conf 71237853069999982899999999874654013668421179994886635899558743334555672011010133
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~lsfDIE~~~~~~~~fP~p~~~~~~ii~I~~~~~~~~~~v~~~~~~~~~~~~~ 240 (410)
T d1s5ja1 161 FADSDEMTRQMAVDWLPIFETEIPKIKRVAIDIEVYTPVKGRIPDSQKAEFPIISIALAGSDGLKKVLVLNRNDVNEGSV 240 (410)
T ss_dssp TTTSCHHHHHHHHHHTHHHHSCCCCCCEEEEEEEECCSSSSCCCCTTTCCSCEEEEEEEETTSCEEEEEECSSCCCCCCE
T ss_pred CCCCCCHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCC
T ss_conf 34443000000011354333689984199999997878889897953367549999998165878999981677766544
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~v~~~~sE~eLL~~F~~~i~dpDii~GyN~~~FD~pyL~~Ra~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 320 (410)
T d1s5ja1 241 KLDGISVERFNTEYELLGRFFDILLEYPIVLTFNGDDFDLPYIYFRALKLGYFPEEIPIDVAGKDEAKYLAGLHIDLYKF 320 (410)
T ss_dssp EETTEEEEEESSHHHHHHHHHHHHTTCSEEEESSTTTTHHHHHHHHHHTTTCCGGGCSEECCSTTCCEETTSEEEEHHHH
T ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCEEEEECCE
T ss_conf 67980999978999999998754316666898435688689999999995996321531104741016855458976062
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~d~~~~~~~~~~l~sy~Ld~Va~~~Lg~~K~d~~~~~~~~~~~~l~~Y~~~D~~L~~~L~~~~~~~~l~~~~~~s~i~ 400 (410)
T d1s5ja1 321 FFNKAVRNYAFEGKYNEYNLDAVAKALLGTSKVKVDTLISFLDVEKLIEYNFRDAEITLQLTTFNNDLTMKLIVLFSRIS 400 (410)
T ss_dssp HTSHHHHHHTSTTCCSSCSHHHHHHHHHCCCCC--SSCTTTCCHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHH
T ss_pred EEEHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 62148998752358788987999999869695567776565897999886099999999998652588899999999985
Q ss_pred ---------E
Q ss_conf ---------8
Q 002647 518 ---------G 518 (897)
Q Consensus 518 ---------a 518 (897)
-
T Consensus 401 ~~plddv~r~ 410 (410)
T d1s5ja1 401 RLGIEELTRT 410 (410)
T ss_dssp CCCHHHHTTS
T ss_pred CCCHHHCCCC
T ss_conf 9798980479
|
| >d2cmza1 e.76.1.2 (A:1-409) Spike glycoprotein {Vesicular stomatitis indiana virus [TaxId: 11277]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Viral glycoprotein ectodomain-like superfamily: Viral glycoprotein ectodomain-like family: Spike glycoprotein-like domain: Spike glycoprotein species: Vesicular stomatitis indiana virus [TaxId: 11277]
Probab=100.00 E-value=0 Score=30885.13 Aligned_cols=1 Identities=0% Similarity=0.437 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
|
T Consensus 1 ~~~iv~p~~~~~~W~~v~~~~l~CP~~~~~~~~~~~~~~~~~~~~p~~~t~~kv~G~~Chk~~w~ttC~~~wyg~~~it~ 80 (409)
T d2cmza1 1 KFTIVFPHNQKGNWKNVPSNYHYCPSSSDLNWHNDLIGTAIQVKMPKSHKAIQADGWMCHASKWVTTCDFRWYGPKYITQ 80 (409)
T ss_dssp CEEEEEECSCCCCCEECCTTCCCCGGGGCTTTCCSCEEEEEEEEEECCCSCCEECEEEEEEEEEEEEEEECTTSCEEEEE
T ss_pred CCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEECCEEEEEEEEEEEEEEEEECCEEEEE
T ss_conf 97689168888888237711244999745467786245558998103566336552798655899998746307558999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~i~~~~pt~~~C~~ai~~~~~G~~~~p~fPp~~C~w~tv~t~e~~~i~i~ph~V~lDpY~~~~~D~~F~gGkCs~~~C~T 160 (409)
T d2cmza1 81 SIRSFTPSVEQCKESIEQTKQGTWLNPGFPPQSCGYATVTDAEAVIVQVTPHHVLVDEYTGEWVDSQFINGKCSNYICPT 160 (409)
T ss_dssp EEEEECCCHHHHHHHHHHHHTTCCCCCCSCCCCCCTTSEEEEEEEEEEEEECCEEEETTTTEEECTTBGGGEECSSEEEB
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEECCCCEEECCCCCCCCCCCCCCCC
T ss_conf 99974499899999998876587258989985515631211037999996455325377882746757999668970677
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~h~~tiWi~d~~~~~~C~~~~~~~~i~~~~~~gk~~s~g~~~~g~~~~~~~~~~~~gACkl~fCG~~GIRl~~GeWv~i~ 240 (409)
T d2cmza1 161 VHNSTTWHSDYKVKGLCDSNLISMDITFFSEDGELSSLGKEGTGFRSNYFAYETGGKACKMQYCKHWGVRLPSGVWFEMA 240 (409)
T ss_dssp SSSSCEEEESSCHHHHHGGGEEEEEEEEEESSCCGGGTTCSSCEEEETTEEEEECTTCEEEEETTEEEEECTTSBEEEES
T ss_pred CCCCCEECCCCCCCCCCCCCCCCCCEEEECCCCHHCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCEECCCCCEEEEE
T ss_conf 67861661577666501355301211684255600014653038983785545778831254348754687798589986
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~p~C~~~~~v~~~~~~~~~~~~~~~~e~~~~~~~Cl~tl~ki~~~~~iS~~dLSyL~p~~PG~G~AY~i~n 320 (409)
T d2cmza1 241 DKDLFAAARFPECPEGSSISAPSQTSVDVSLIQDVERILDYSLCQETWSKIRAGLPISPVDLSYLAPKNPGTGPAFTIIN 320 (409)
T ss_dssp CHHHHHHTTCCBCCTTCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHTTSCCSSEEEEEEEEET
T ss_pred CCCCCEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEEEEC
T ss_conf 66641002577799998655036775166778999877879998999999974798775555420567999864379989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 gtL~~~~~~Y~~v~~~~~~~~~~~~~~~~~~~~~~~w~~w~~~~~~~~G~NG~~~~~~~~~~p~~~~~~~~~d~~l~~~~ 400 (409)
T d2cmza1 321 GTLKYFETRYIRVDIAAPILSRMVGMISGTTTERELWDDWAPYEDVEIGPNGVLRTSSGYKFPLYMIGHGMLDSDLHLSS 400 (409)
T ss_dssp TEEEEEEEEEEEEEESSSEESSSEEEETTSCCEEECCCCCEEETTEEECGGGCEEETTEEECCHHHHHHHHHHHHHHHHC
T ss_pred CEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEECCCEEEEECCEEEECHHHHCCCCHHHHHHHHH
T ss_conf 94897668999998226653332564477774542244646868844466526985994895656711520034444440
Q ss_pred --------E
Q ss_conf --------8
Q 002647 518 --------G 518 (897)
Q Consensus 518 --------a 518 (897)
-
T Consensus 401 ~~~~~~HPh 409 (409)
T d2cmza1 401 KAQVFEHPH 409 (409)
T ss_dssp CCEECCCCC
T ss_pred CCCCCCCCC
T ss_conf 267678999
|
| >d2g0da1 a.102.6.1 (A:7-415) Nisin biosynthesis protein NisC {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: LanC-like family: LanC-like domain: Nisin biosynthesis protein NisC species: Lactococcus lactis [TaxId: 1358]
Probab=100.00 E-value=0 Score=30882.56 Aligned_cols=1 Identities=100% Similarity=3.095 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
|
T Consensus 1 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~sLy~G~~GiaL~l~~l~~~t~~~~~~~~a~~~l~~~~~~~~~~~~~~~g 80 (409)
T d2g0da1 1 KKNIKRNVEKIIAQWDERTRKNKENFDFGELTLSTGLPGIILMLAELKNKDNSKIYQKKIDNYIEYIVSKLSTYGLLTGS 80 (409)
T ss_dssp CCHHHHHHHHHHHHHHHHHHC-----CGGGGSTTTSHHHHHHHHHTTTTSTTHHHHHHHHHHHHHHHHHHHHHHCCSCCC
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 95188999999985566530365569989983238779999999999886498789999999999999998607998863
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 lf~G~~Gi~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~D~l~G~aG~~~~LL~~~~~~~~~~~~ 160 (409)
T d2g0da1 81 LYSGAAGIALSILHLREDDEKYKNLLDSLNRYIEYFVREKIEGFNLENITPPDYDVIEGLSGILSYLLLINDEQYDDLKI 160 (409)
T ss_dssp TTTSHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCHHHHSSSSSHHHHHHHHTTCCCGGGHHHHH
T ss_pred EECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHCCCCCCHHHH
T ss_conf 00787999999999986050356899999999999999999874402367766212226188999999833222407899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~aHG~sGi~~~L~~~~~~~~~~~~~~~~~~~~~~~l~ 240 (409)
T d2g0da1 161 LIINFLSNLTKENNGLISLYIKSENQMSQSESEMYPLGCLNMGLAHGLAGVGCILAYAHIKGYSNEASLSALQKIIFIYE 240 (409)
T ss_dssp HHHHHHHHTTSCCSSSCTTCBCGGGSSSHHHHHHCTTCBEECCTTTSHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
T ss_conf 99999999997413554333454445552200036778776426550799999999998843788218999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~la~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 320 (409)
T d2g0da1 241 KFELERKKQFLWKDGLVADELKKEKVIREASFIRDAWCYGGPGISLLYLYGGLALDNDYFVDKAEKILESAMQRKLGIDS 320 (409)
T ss_dssp HHCCCGGGTTCCCSEECHHHHHHTSCCSCCSCCCCCSSSSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCTTCCS
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 98642335688987676531123334456766655437884679999999998719889999999999999983548998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~LCHG~aG~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~G~aGi~~~Ll~~~~~~~~~~W~~~~L 400 (409)
T d2g0da1 321 YMICHGYSGLIEICSLFKRLLNTKKFDSYMEEFNVNSEQILEEYGDESGTGFLEGISGCILVLSKFEYSINFTYWRQALL 400 (409)
T ss_dssp CCTTTSHHHHHHHHHHHHHHHCCCTTHHHHHHHHHTHHHHHHSCCSTTCSSTTTSHHHHHHHHHHHHSCCCSSCGGGGGT
T ss_pred CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHCCCCCCCCCCHHHC
T ss_conf 93568689999999999988488799999999999888743467899997244169999999998268999987112110
Q ss_pred --------E
Q ss_conf --------8
Q 002647 518 --------G 518 (897)
Q Consensus 518 --------a 518 (897)
+
T Consensus 401 ~~~~~~~~~ 409 (409)
T d2g0da1 401 LFDDFLKGG 409 (409)
T ss_dssp CCTTTTTCC
T ss_pred CCCCCCCCC
T ss_conf 456234488
|
| >d1tv5a1 c.1.4.1 (A:158-566) Dihydroorotate dehydrogenase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: FMN-linked oxidoreductases family: FMN-linked oxidoreductases domain: Dihydroorotate dehydrogenase species: Plasmodium falciparum [TaxId: 5833]
Probab=100.00 E-value=0 Score=30882.53 Aligned_cols=1 Identities=0% Similarity=-1.524 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~~y~~~~~~~l~~l~pe~ah~~~~~~l~~~~~~~~~~~~~~~L~~~v~Gl~f~NPiglAAG~dk~~~~i~~~ 80 (409)
T d1tv5a1 1 FESYNPEFFLYDIFLKFCLKYIDGEICHDLFLLLGKYNILPYDTSNDSIYACTNIKHLDFINPFGVAAGFDKNGVCIDSI 80 (409)
T ss_dssp CCTTSTTCHHHHHHHHHHHHHSCHHHHHHHHHHHHHTTCSCCCCSCCCGGGCEEETTEEESSSEEECTTTTTTCSSHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCEECCCCCEECCCCCCCHHHHHHH
T ss_conf 98778326789999999852599899999999999735777534677744466788764489687560668788999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~lGfG~ve~gTvT~~p~~GNp~PR~~r~~~~~~liN~~Gl~n~G~~~~~~~l~~~~~~~~~~~~~~~~i~gi~~~~~~~ 160 (409)
T d1tv5a1 81 LKLGFSFIEIGTITPRGQTGNAKPRIFRDVESRSIINSCGFNNMGCDKVTENLILFRKRQEEDKLLSKHIVGVSIGKNKD 160 (409)
T ss_dssp HTTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCSCBSCHHHHHHHHHHHHHHHHHCSTTTTCEEEEEECCCTT
T ss_pred HHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 86688769951023035647897322345433321024677763589999987777654430566654300231454420
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~aD~~elNiScPNt~glr~~~~~~~L~~ll~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (409)
T d1tv5a1 161 TVNIVDDLKYCINKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDESTYNEDNKIVEKKN 240 (409)
T ss_dssp CSCHHHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHHHC----------------------
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCC
T ss_conf 15788877999998850143100010265433442456889999999999999875301222221111111001111000
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~ppi~vKlsPd~~~~~i~~i~~~~~~~g~dgii~~Nt~~~~~~~~~~~~~~GGlS 320 (409)
T d1tv5a1 241 NFNKNNSHMMKDAKDNFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVS 320 (409)
T ss_dssp ----------------CCCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEE
T ss_pred CCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 11222222110000000110123567865998589987024688999988606541011322225555334234677643
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 G~~l~~~al~~v~~v~~~~~~~ipIIGvGGI~s~~Da~e~i~AGAs~VQv~T~li~~Gp~~v~~I~~~L~~~l~~~g~~~ 400 (409)
T d1tv5a1 321 GAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVFNGMKSAVQIKRELNHLLYQRGYYN 400 (409)
T ss_dssp EHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHTTEEEEEESHHHHHHGGGHHHHHHHHHHHHHHHHTCSS
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 10178899999999999708996099989979999999999849978763067871192899999999999999829998
Q ss_pred --------E
Q ss_conf --------8
Q 002647 518 --------G 518 (897)
Q Consensus 518 --------a 518 (897)
=
T Consensus 401 i~e~iG~~h 409 (409)
T d1tv5a1 401 LKEAIGRKH 409 (409)
T ss_dssp SGGGTTTTC
T ss_pred HHHHCCCCC
T ss_conf 999539889
|
| >d1qtma2 e.8.1.1 (A:423-831) DNA polymerase I (Klenow fragment) {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: DNA/RNA polymerases superfamily: DNA/RNA polymerases family: DNA polymerase I domain: DNA polymerase I (Klenow fragment) species: Thermus aquaticus [TaxId: 271]
Probab=100.00 E-value=0 Score=30881.56 Aligned_cols=1 Identities=0% Similarity=-0.227 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~l~~~y~~lE~~l~~vl~~me~~Gi~vD~~~l~~~~~~~~~~~~~l~~~~~~~~g~~fN~~S~~ql~~~L~~~l~l~~ 80 (409)
T d1qtma2 1 EERLLWLYREVERPLSAVLAHMEATGVRLDVAYLRALSLEVAEEIARLEAEVFRLAGHPFNLNSRDQLERVLFDELGLPA 80 (409)
T ss_dssp CHHHHHHHHHTHHHHHHHHHHHHHHCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCTTCHHHHHHHHHTTSCCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf 90789999999968999999999729284899999999999999999999999995991899999999999999739997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~g~~~~~~~~l~~l~~~~~~~~~~~~~~~~~kl~~~~~~~~~~~~~~~~grih~~~~~~gt~TGR~ss~~pnlq 160 (409)
T d1qtma2 81 IGKTEKTGKRSTSAAVLEALREAHPIVEKILQYRELTKLKSTYIDPLPDLIHPRTGRLHTRFNQTATATGRLSSSDPNLQ 160 (409)
T ss_dssp CCBCTTTCCBCCCHHHHHHTTTTCTHHHHHHHHHHHHHHHHHTTTTGGGGBCTTTSEECCEEESSCCSSSCCEEESSCCS
T ss_pred CCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCHHH
T ss_conf 66656678755323368887421168999999889988888878778775038899163144556666665466650120
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~p~~~~~~~~~R~~f~a~~G~~lv~aD~sqiElRvlA~ls~D~~l~~~~~~g~D~~~~~a~~~~~~~~~~v~~~~R~~a 240 (409)
T d1qtma2 161 NIPVRTPLGQRIRRAFIAEEGWLLVALDYSQIELRVLAHLSGDENLIRVFQEGRDIHTETASWMFGVPREAVDPLMRRAA 240 (409)
T ss_dssp SCCCSSHHHHHHHTTEECCTTEEEEEEEETTHHHHHHHHHHCCHHHHHHHHTTCCHHHHHHHHHHTCCGGGCCHHHHHHH
T ss_pred CCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCEECCCCCCHHHHHHHHCCCCCEEECHHHHHHH
T ss_conf 25410014454100555789968998530236324688860674411110157620101012212764223140676667
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 K~~~fg~~YG~g~~~l~~~~~~~~~ea~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~v~t~~Gr~~~~~~~~~~~~~~~~ 320 (409)
T d1qtma2 241 KTINFGVLYGMSAHRLSQELAIPYEEAQAFIERYFQSFPKVRAWIEKTLEEGRRRGYVETLFGRRRYVPDLEARVKSVRE 320 (409)
T ss_dssp HHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHSEEECTTCCEEECGGGGCSCHHHHH
T ss_pred HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCHHHHHHH
T ss_conf 76410123576334566665442778999999998864235677788999887627233235653332100001254432
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~~~~~N~~iQg~aAdi~k~a~~~~~~~l~~~~~~iv~~VHDEiv~ev~~~~a~~~~~~i~~~M~~~~~l~vPl~~e~~ 400 (409)
T d1qtma2 321 AAERMAFNMPVQGTAADLMKLAMVKLFPRLEEMGARMLLQVHDELVLEAPKERAEAVARLAKEVMEGVYPLAVPLEVEVG 400 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEECSSEEEEEEETTTHHHHHHHHHHHHHTSSCCSSCCCEEEE
T ss_pred HHHHHCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
T ss_conf 20200121320399999999999999999886699899974413499987789999999999998603268997786621
Q ss_pred --------E
Q ss_conf --------8
Q 002647 518 --------G 518 (897)
Q Consensus 518 --------a 518 (897)
-
T Consensus 401 ig~~W~e~k 409 (409)
T d1qtma2 401 IGEDWLSAK 409 (409)
T ss_dssp EESBHHHHC
T ss_pred ECCCHHHCC
T ss_conf 558967749
|
| >d1b25a1 a.110.1.1 (A:211-619) Formaldehyde ferredoxin oxidoreductase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Aldehyde ferredoxin oxidoreductase, C-terminal domains superfamily: Aldehyde ferredoxin oxidoreductase, C-terminal domains family: Aldehyde ferredoxin oxidoreductase, C-terminal domains domain: Formaldehyde ferredoxin oxidoreductase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=100.00 E-value=0 Score=30879.20 Aligned_cols=1 Identities=0% Similarity=-0.360 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 D~e~~~~~~~~~~~~i~~~~~~~~~~~~GT~~~~~~~~~~g~lP~rNf~~g~~~~a~~isge~~~~~~~~~~~C~~Cpi~ 80 (409)
T d1b25a1 1 DKEELKKLSQEAYNEILNSPGYPFWKRQGTMAAVEWCNTNYALPTRNFSDGYFEFARSIDGYTMEGMKVQQRGCPYCNMP 80 (409)
T ss_dssp CHHHHHHHHHHHHHHHHHSTTHHHHHHHGGGGHHHHHHHTTCSCBTTTTBSCCTTGGGGSHHHHHHHEEEEECCTTCSSC
T ss_pred CHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCCCCCC
T ss_conf 98999999999999987194176788368599999998759968177878878873445899998775127888999678
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 C~~~~~~~~g~~~gpEYEt~~~~Gs~~gi~D~~~v~~~n~lcd~~GlDtIs~G~~ia~amE~~e~Gll~~~~~~Gd~e~~ 160 (409)
T d1b25a1 81 CGNVVLDAEGQESELDYENVALLGSNLGIGKLNEVSVLNRIADEMGMDTISLGVSIAHVMEAVERGILKEGPTFGDFKGA 160 (409)
T ss_dssp CEEEEECTTSCEEEECHHHHHHHTGGGTCCCHHHHHHHHHHHHHHTBCHHHHHHHHHHHHHHHHTTSSSSSCCTTCHHHH
T ss_pred CCCEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
T ss_conf 88358728987078536479887660289999999999999998687456450599999999977999866667886999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~ll~~Ia~r~GeiG~~La~G~~~aae~~G~~~~a~~vKG~e~p~~dpR~~~g~~l~yats~rGa~H~~~~~~~~~~~~~ 240 (409)
T d1b25a1 161 KQLALDIAYRKGELGNLAAEGVKAMAEKLGTHDFAMHVKGLEVSGYNCYIYPAMALAYGTSAIGAHHKEAWVIAWEIGTA 240 (409)
T ss_dssp HHHHHHHHTTCHHHHHHHTTCHHHHHHHHTCGGGCCEETTEECCSCCCTTCHHHHHHHHHCTTSSCSTTCCCHHHHHTCC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHCCC
T ss_conf 99999998667857899973399999994982321020777666527763024666551246787045533220331357
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dslg~C~F~~~~~~~~~e~~~~~l~avTG~~~t~eel~~~GeRi~ 320 (409)
T d1b25a1 241 PIEGEKAEKVEYKISYDPIKAQKVVELQRLRGGLFEMLTACRLPWVEVGLSLDYYPKLLKAITGVTYTWDDLYKAADRVY 320 (409)
T ss_dssp TTC--------CCCCCCTHHHHHHHHHHHHHTTHHHHHTCCSHHHHHHCCCTTHHHHHHHHHHSCCCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf 41110123312345678078999999999999999860404552214577899999999984388999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~L~R~fN~r~G~~~~~~~dD~lP~r~~~ep~~~Gp~~G~~~d~~~~e~~l~~YY~~rGWde~G~Pt~e~L~~LgL~~v~~ 400 (409)
T d1b25a1 321 SLIRAYWVREFNGKWDRKMDYPPKRWFTEGLKSGPHKGEHLDEKKYDELLSEYYRIRGWDERGIPKKETLKELDLDFVIP 400 (409)
T ss_dssp HHHHHHHHHHTTTCCCGGGGCCCTHHHHCCCSSSTTTTCCCCHHHHHHHHHHHHHHHTBCTTSCBCHHHHHHTTCTTHHH
T ss_pred HHHHHHHHHCCCCCCCHHHCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHH
T ss_conf 99999998606679983427797154118887787578868999999999999997399988846999999879966899
Q ss_pred --------E
Q ss_conf --------8
Q 002647 518 --------G 518 (897)
Q Consensus 518 --------a 518 (897)
-
T Consensus 401 ~l~~~~~~~ 409 (409)
T d1b25a1 401 ELEKVTNLE 409 (409)
T ss_dssp HHHTTSCCC
T ss_pred HHHHHHCCC
T ss_conf 999986169
|
| >d1s9ra_ d.126.1.4 (A:) Arginine deiminase {Mycoplasma arginini [TaxId: 2094]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Pentein, beta/alpha-propeller superfamily: Pentein family: Arginine deiminase domain: Arginine deiminase species: Mycoplasma arginini [TaxId: 2094]
Probab=100.00 E-value=0 Score=30878.58 Aligned_cols=1 Identities=0% Similarity=-1.391 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~v~SE~g~Lk~V~vhrPg~e~~~l~P~~~~~~lfd~~~~~~~a~~Ehd~f~~~L~~~Gv~V~~l~~ll~e 80 (409)
T d1s9ra_ 1 SVFDSKFKGIHVYSEIGELESVLVHEPGREIDYITPARLDELLFSAILESHDARKEHKQFVAELKANDINVVELIDLVAE 80 (409)
T ss_dssp CCSCTTCCSCBBCCSSSCEEEEEECCCCGGGGGCCGGGHHHHTCSSCCCHHHHHHHHHHHHHHHHTTTCEEEEHHHHHHH
T ss_pred CCCCCCCCCCEEECCCCCCCEEEECCCCHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHH
T ss_conf 93113778641577700131799769848987269311577514777799999999999999999789889983786876
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~g~~~~e~~~~~~~~~~~~plpn~~F~RD 160 (409)
T d1s9ra_ 81 TYDLASQEAKDKLIEEFLEDSEPVLSEEHKVVVRNFLKAKKTSRELVEIMMAGITKYDLGIEADHELIVDPMPNLYFTRD 160 (409)
T ss_dssp HHHHSCHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHTCSSHHHHHHHHHHCEEHHHHTCCCSSSEEECCCGGGGCTTS
T ss_pred HHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCHHCCC
T ss_conf 55407999999999863101134454768888999986048889999988524515442555676334678755200057
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~gvil~~m~~~~R~~E~~~~~~i~~~~~~~~~~~~~~~~~~~~~~EGGD~l~~g~~~~~iG~s~RTn~~gie~L 240 (409)
T d1s9ra_ 161 PFASVGNGVTIHYMRYKVRQRETLFSRFVFSNHPKLINTPWYYDPSLKLSIEGGDVFIYNNDTLVVGVSERTDLQTVTLL 240 (409)
T ss_dssp SEEEEBTEEEECCCSSHHHHTTHHHHHHHHHHCTTTTTCCEEECGGGCSCCCGGGEEECSSSEEEEEESSSCCHHHHHHH
T ss_pred CEEEECCCEEECCCCCHHHCCCHHHHHHHHHHCHHHCCCCEEEECCCCCCCCCCCEEEECCCEEEEEECCCCCHHHHHHH
T ss_conf 43687486897899984665477999999984844349855972687664556747998996799997876798999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~L~~~~~~~~~~v~~~~~p~~~~~mHLDt~f~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 320 (409)
T d1s9ra_ 241 AKNIVANKECEFKRIVAINVPKWTNLMHLDTWLTMLDKDKFLYSPIANDVFKFWDYDLVNGGAEPQPVENGLPLEGLLQS 320 (409)
T ss_dssp HHHHHHCTTCCCCEEEEEECCCBTTBCSGGGTEEECSSSEEEECGGGTTTCEEEEEETTTSCSSCCCEEECCCHHHHHHH
T ss_pred HHHHHHCCCCEEEEEEEECCCCCCCCEEECCCEEECCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 99863447712689875047886552233560243279849982543564220012203676654101210338999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~~~~~~i~~~~~~~~~~~~~~E~~~~~~N~L~l~p~~Vi~~~~~~~~~~~L~~~Gievi~i~~~el~~~gGg~hCmT~ 400 (409)
T d1s9ra_ 321 IINKKPVLIPIAGEGASQMEIERETHFDGTNYLAIRPGVVIGYSRNEKTNAALEAAGIKVLPFHGNQLSLGMGNARCMSM 400 (409)
T ss_dssp HHSSCCEEEETTCTTCCHHHHHHHHHTTTTCCEEEETTEEEEETTCHHHHHHHHHTTCEEEEECCHHHHTTSCCTTTTCE
T ss_pred HHCCCCCEEEECCCCCCHHHHHHHHCCCCEEEEEECCCEEEEECCCHHHHHHHHHCCCEEEEECHHHHHCCCCCCEECCC
T ss_conf 74799808984688764566655540574049997799899858869999999978899999673785327998777870
Q ss_pred --------E
Q ss_conf --------8
Q 002647 518 --------G 518 (897)
Q Consensus 518 --------a 518 (897)
-
T Consensus 401 pl~Re~v~~ 409 (409)
T d1s9ra_ 401 PLSRKDVKW 409 (409)
T ss_dssp EEEECCCCC
T ss_pred CCEECCCCC
T ss_conf 345279899
|
| >d1dkla_ c.60.1.2 (A:) Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate mutase-like superfamily: Phosphoglycerate mutase-like family: Histidine acid phosphatase domain: Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=30876.25 Aligned_cols=1 Identities=0% Similarity=-1.523 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~p~~~L~~V~il~RHG~R~P~~~~~~~~~~~~~~~~~~~~~~G~LT~~G~~q~~~lG~~lr~~Y~~~~~~~~~~~~~~~ 80 (409)
T d1dkla_ 1 SEPELKLESVVIVSRHGVRAPTKATQLMQDVTPDAWPTWPVKLGWLTPRGGELIAYLGHYQRQRLVADGLLAKKGCPQSG 80 (409)
T ss_dssp CCSCEEEEEEEEEEECCCBCCCCCCHHHHHTCSSCCCCCSSCTTSBCHHHHHHHHHHHHHHHHHHHHTTSSCSSSCCCTT
T ss_pred CCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 99888898999997188899999866557688433557999930526999999999999999998774367887778712
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~i~vrSt~~~Rt~~SA~afl~Gl~p~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (409)
T d1dkla_ 81 QVAIIADVDERTRKTGEAFAAGLAPDCAITVHTQADTSSPDPLFNPLKTGVCQLDNANVTDAILSRAGGSIADFTGHRQT 160 (409)
T ss_dssp TEEEEECSSHHHHHHHHHHHHHHSTTCCCCEECCSCTTSCCGGGCTTTTTSSCCCHHHHHHHHHHHTTSSHHHHHHTTHH
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 06987279729999999999852788676655445556667566777577667536777789987745647778899889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~p~~~~~~~~~ 240 (409)
T d1dkla_ 161 AFRELERVLNFPQSNLCLKREKQDESCSLTQALPSELKVSADNVSLTGAVSLASMLTEIFLLQQAQGMPEPGWGRITDSH 240 (409)
T ss_dssp HHHHHHHHHTGGGSHHHHTC-----CCCHHHHSCCCEEEETTEEEECHHHHHHHHHHHHHHHHHHHTCSSGGGGTCCSHH
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCHH
T ss_conf 99999999721121037877510037889999899988640477767726667659999999998599972110357799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~k~~l~s~HD~ti~~ll~aLgl~~~~~ 320 (409)
T d1dkla_ 241 QWNTLLSLHNAQFYLLQRTPEVARSRATPLLDLIKTALTPHPPQKQAYGVTLPTSVLFIAGHDTNLANLGGALELNWTLP 320 (409)
T ss_dssp HHHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHSCCCCEECGGGCEESCSEEEEEECHHHHHHHHHHHTCCCCBT
T ss_pred HHHHHHHHHHHHHEECCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCC
T ss_conf 99999999998650005887899873668999999999876404555678888638999568414999999819853456
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~~~~p~as~~~~El~~~~~~~~~~vrv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gC~~~~~~~~C~l~~F~~~~~ 400 (409)
T d1dkla_ 321 GQPDNTPPGGELVFERWRRLSDNSQWIQVSLVFQTLQQMRDKTPLSLNTPPGEVKLTLAGCEERNAQGMCSLAGFTQIVN 400 (409)
T ss_dssp TBSCSSCTTCEEEEEEEEETTTTEEEEEEEEEECCHHHHHTTCCCCSSSCCEEEECCCTTCCCBCTTSCEEHHHHHHHHH
T ss_pred CCCCCCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 66899997663899999846999725999995376201245665201025775046479998889999368999999999
Q ss_pred --------E
Q ss_conf --------8
Q 002647 518 --------G 518 (897)
Q Consensus 518 --------a 518 (897)
-
T Consensus 401 ~~~~p~c~~ 409 (409)
T d1dkla_ 401 EARIPACSL 409 (409)
T ss_dssp HHSCGGGCC
T ss_pred HHHHHHCCC
T ss_conf 775021279
|
| >d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Halothermothrix orenii [TaxId: 31909]
Probab=100.00 E-value=0 Score=30875.51 Aligned_cols=1 Identities=0% Similarity=-1.424 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~k~~v~Y~~~~~~f~d~~~~~~Gd~~g~~~kLdyl~~~~~~~i~~LGv~~i~l~Pi~~~~~~~GY~~~d~~~vd~~~G~ 80 (409)
T d1wzaa2 1 FEKHGTYYEIFVRSFYDSDGDGIGDLKGIIEKLDYLNDGDPETIADLGVNGIWLMPIFKSPSYHGYDVTDYYKINPDYGT 80 (409)
T ss_dssp CCCCCCEEEECGGGSCCSSSSSCCCHHHHHHTHHHHCCSCTTCCSSCCCSEEEECCCEECSSSSCCSCSEEEEECGGGCC
T ss_pred CCCCCEEEEEECCHHCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98761799996412137999987489999975533210022277616866799798887989888684567875834599
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~dlk~lv~~~H~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (409)
T d1wzaa2 81 LEDFHKLVEAAHQRGIKVIIDLPINHTSERHPWFLKASRDKNSEYRDYYVWAGPDTDTKETKLDGGRVWHYSPTGMYYGY 160 (409)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCSBCCTTSHHHHHHHTCTTCTTGGGBCBCCSCCCCCBCSSSCBCSEEEETTEEEECS
T ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999999999866988998213344445673123331146553345322356444567654579853322346664466
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~dln~~n~~vr~~~~~~~~~wi~~gVDGfR~D~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~ 240 (409)
T d1wzaa2 161 FWSGMPDLNYNNPEVQEKVIGIAKYWLKQGVDGFRLDGAMHIFPPAQYDKNFTWWEKFRQEIEEVKPVYLVGEVWDISET 240 (409)
T ss_dssp SCTTSCBBCTTSHHHHHHHHHHHHHHHHTTCCEEEEECCCTTSCGGGTTHHHHHHHHHHHHHTTTSCCEEEEECCSCHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCHHHCCCCHHCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCC
T ss_conf 77887620325689999999999999982987212253532166032020068999999740037880799986037521
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~nhD~~r~~~~~~~~~~~~~~ 320 (409)
T d1wzaa2 241 VAPYFKYGFDSTFNFKLAEAVIATAKAGFPFGFNKKAKHIYGVYDREVGFGNYIDAPFLTNHDQNRILDQLGQDRNKARV 320 (409)
T ss_dssp HGGGGTTTCSEEBCHHHHHHHHHHHHHTCSHHHHHHHHHHHHHHHHHTCTTSCCCBCBSCCTTSCCHHHHTTTCHHHHHH
T ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 13444202232012468999988774167521678877777766543002456556312455567310002786678999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~~~lt~pG~P~iy~G~E~G~~~~~~~~~~R~p~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~Li~l 400 (409)
T d1wzaa2 321 AASIYLTLPGNPFIYYGEEIGMRGQGPHEVIREPFQWYNGSGEGETYWEPAMYNDGFTSVEQEEKNLDSLLNHYRRLIHF 400 (409)
T ss_dssp HHHHHTTSSSCCEEETTGGGTCCCCSSHHHHTCCCCCSSSCCTTCCCSSCCTTTTTTCCHHHHTTCTTSHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHH
T ss_conf 99999838998799558653766899986546788777788888776775555655468998863748999999999999
Q ss_pred --------E
Q ss_conf --------8
Q 002647 518 --------G 518 (897)
Q Consensus 518 --------a 518 (897)
-
T Consensus 401 Rk~~pal~s 409 (409)
T d1wzaa2 401 RNENPVFYT 409 (409)
T ss_dssp HHHCTHHHH
T ss_pred HHHCCHHCC
T ss_conf 960813039
|
| >d1f1oa_ a.127.1.1 (A:) Adenylosuccinate lyase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: L-aspartase-like superfamily: L-aspartase-like family: L-aspartase/fumarase domain: Adenylosuccinate lyase species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=0 Score=30805.78 Aligned_cols=1 Identities=0% Similarity=-1.191 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 em~~ifs~~~~~~~~l~ve~A~a~a~~e~G~ip~~~~~~i~~~~~~~~~~~~~~~~~~~~~v~a~~~~L~e~~g~~~~~v 80 (408)
T d1f1oa_ 1 EMSAIWTDENRFQAWLEVEILACEAWAELGVIPKEDVKVMRENASFDINRILEIEKDTRHDVVAFTRAVSESLGEERKWV 80 (408)
T ss_pred CHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHH
T ss_conf 94787790799999999999999999877999999999999847677999998874538858999999998738646341
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 H~G~SsnD~~~Ta~~l~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL 160 (408)
T d1f1oa_ 81 HYGLTSTDVVDTALSYLLKQANDILLKDLERFVDIIKEKAKEHKYTVMMGRTHGVHAEPTTFGLKLALWHEEMKRNLERF 160 (408)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 67887899998999999998488888899999999999999828860146675177777408899999999999879999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~lGGA~Gt~~~~~~~~~~~~~~~lg~~~~~~~~~~~~rd~~~e~~~~l~~la~~l~kia~Dl~~~~s~~~ 240 (408)
T d1f1oa_ 161 KQAKAGIEVGKISGAVGTYANIDPFVEQYVCEKLGLKAAPISTQTLQRDRHADYMATLALIATSIEKFAVEIRGLQKSET 240 (408)
T ss_pred HHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99987650124460431346788558999999846767872278887788999987999999999987789998871344
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~e~~~~~~~GSSiMP~K~NP~~~E~v~~~~~~~~g~~~~~~~~~~~~~erd~~~~~~~~~~l~~~~~~~~~~l~~~~ 320 (408)
T d1f1oa_ 241 REVEEFFAKGQKGSSAMPHKRNPIGSENMTGMARVIRGYMMTAYENVPLWHERDISHSSAERIILPDATIALNYMLNRFS 320 (408)
T ss_pred CEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 61440366789875200035564079999987601111378998726431200304567776214009999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~l~~l~vn~e~m~~nl~~~~~~~~a~~~~~~Lv~~gl~~~~Ah~~v~~~~~~a~~~~~~l~e~l~~~~~i~~~Ls~eel 400 (408)
T d1f1oa_ 321 NIVKNLTVFPENMKRNMDRTLGLIYSQRVLLALIDTGLTREEAYDTVQPKAMEAWEKQVPFRELVEAEEKITSRLSPEKI 400 (408)
T ss_pred HHHHCCEECHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHCCCCHHHH
T ss_conf 87637865799999999730472689999999998299989999999999999999798899998706786668999999
Q ss_pred -------E
Q ss_conf -------8
Q 002647 518 -------G 518 (897)
Q Consensus 518 -------a 518 (897)
=
T Consensus 401 ~~~lDp~~ 408 (408)
T d1f1oa_ 401 ADCFDYNY 408 (408)
T ss_pred HHHCCCCC
T ss_conf 98659998
|
| >d1r76a_ a.102.5.1 (A:) Polygalacturonic acid lyase (pectate lyase) {Azospirillum irakense [TaxId: 34011]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Family 10 polysaccharide lyase family: Family 10 polysaccharide lyase domain: Polygalacturonic acid lyase (pectate lyase) species: Azospirillum irakense [TaxId: 34011]
Probab=100.00 E-value=0 Score=30806.84 Aligned_cols=1 Identities=0% Similarity=-0.061 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~a~~~t~ar~~~~p~~~~aAw~~y~a~s~~~~~a~~~~~~a~~~~g~~~p~~p~~~~~~~~~~l~~~~~wy~s 80 (408)
T d1r76a_ 1 AVIGMNEAASALTPSRVSSLPDTQRAAWQEYLARSEAQLSRDKASLAAELAPGQPLPPPPAEGKGADTMPLDKPAAWYTS 80 (408)
T ss_dssp CCCEECCCCCCCCHHHHSSCSSSSCHHHHHHHHHHHHHHHHHHHHHHHHSCTTCCCCCCCCCSCCGGGSCSSSCGGGGGS
T ss_pred CCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
T ss_conf 95554541011687776369878888986436665556766776666653248878999986643033671467444577
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~eA~~iAd~lL~~Q~p~GGWpKn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TiDN~aTt~el~~La~ 160 (408)
T d1r76a_ 81 KAARHVADVIVSFQTPAGGWGKNQPRDGALRLPGQHYTGENVAKVKSGSNDLDAARDRDWHYVGTIDNDATVTEIRFLAQ 160 (408)
T ss_dssp HHHHHHHHHHHHHCCTTSCCCSSCCSSSCCCCTTCCSSCCCCCCCC---------CCCCCSSSSBCGGGTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
T ss_conf 79999999999853447998776653200110102232210134455300144555542246788686248999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~y~~a~~~~~~~ll~~Q~~~Ggwpqf~p~~~~Y~~~ItfND~~m~~~l~~l~~~~~~~~~~~~~~~~~r 240 (408)
T d1r76a_ 161 VVSQLAPEEAAPYRDAALKGIEYLLASQFPNGGWPQVWPLEGGYHDAITYNDDALVHVAELLSDIAAGRDGFGFVPPAIR 240 (408)
T ss_dssp HHHHSCGGGCHHHHHHHHHHHHHHHHHSCTTSCCBSBSSCCCGGGGSEECGGGHHHHHHHHHHHHHHTCTTCTTSCHHHH
T ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH
T ss_conf 99973763214699999999999997317799964437887552343112755899799999999973465344787889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~r~~~a~~rgi~~ll~~Q~~~gg~~~~Wg~Qhd~~tl~P~~aR~yE~~sls~~eS~~i~~~LM~~~~ps~~~~~aI~~av 320 (408)
T d1r76a_ 241 TRALEATNAAIHCIVETQVVQDGKRLGWGQQHDALTLRPTSARNFEPAALSSTESARILLFLMEIEAPSDAVKQAIRGGV 320 (408)
T ss_dssp HHHHHHHHHHHHHHHHHSCEETTEECCCCSEECTTTCSBCCCSTTCCSCEEHHHHHHHHHHHTTSSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf 99999999999999987610488867486525835567344336677264003189999999717777755999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~Wl~~~~~~~~~~~~~~~~~~~~~~~~~~~lwaRfyel~tn~P~f~~Rd~~~~~~~~ei~~err~gy~w~~~~~~~~~~~ 400 (408)
T d1r76a_ 321 AWLNTSVIRDRAWVKSDQGYQLVTEQGAKPLWSRFYSLDGNKPVFGDRDKTIHDDVMGISQERRTGYAWYTTSPQKALSA 400 (408)
T ss_dssp HHHHHSCCCC---------------CCSSCCEESEECSSSCCBCEECTTSEEESCGGGSCHHHHSSSCCEESTTHHHHHH
T ss_pred HHHHHCCCCCCEEEECCCCCEEEECCCCCCCCEEEEECCCCCEEEECCCCCEECCHHHCCHHHCCCCCCCCCCHHHHHHH
T ss_conf 99986646785355348884242089998533256775899624657998653477662097628702427776999998
Q ss_pred -------E
Q ss_conf -------8
Q 002647 518 -------G 518 (897)
Q Consensus 518 -------a 518 (897)
-
T Consensus 401 y~~w~~~~ 408 (408)
T d1r76a_ 401 FTKWEKRS 408 (408)
T ss_dssp HHHHHHCC
T ss_pred HHHHHHCC
T ss_conf 89987449
|
| >d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Ankyrin-R species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=30803.18 Aligned_cols=1 Identities=0% Similarity=-0.991 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~TpL~~Aa~~g~~~~v~~Ll~~g~~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~~~~g~t~L~~A~~~g~~~ 80 (408)
T d1n11a_ 1 LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTN 80 (408)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHH
T ss_conf 98699999884899999999787899988999988999999868899999999885998877999899999999869977
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~ 160 (408)
T d1n11a_ 81 MVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNA 160 (408)
T ss_dssp HHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCC
T ss_conf 99999874100123211122024555430332222222211001001456464289999875989999999976998886
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 240 (408)
T d1n11a_ 161 AGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQ 240 (408)
T ss_dssp CCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred CCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
T ss_conf 78767409999998599999999986588400457789971024320210455555432001221247789999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~t~L~~~~~~~~~~~~~~ll~~g 320 (408)
T d1n11a_ 241 EGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQ 320 (408)
T ss_dssp TTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTT
T ss_pred HCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCC
T ss_conf 08676754420022111112478997334543028489999999779965621023445302210058621355301333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~in~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~GAd~n~~d~~G~t~L~~A~~~~~~~iv~~L~~~~~~~~~~~~~~~~~~ 400 (408)
T d1n11a_ 321 ADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRM 400 (408)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCHHHHHHHHHHCCCCSSCC----CCC
T ss_pred CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 32234689999999999986889999999987889988799998999999983999999999998736564560003668
Q ss_pred -------E
Q ss_conf -------8
Q 002647 518 -------G 518 (897)
Q Consensus 518 -------a 518 (897)
-
T Consensus 401 ~~~~~~~~ 408 (408)
T d1n11a_ 401 SFPETVDE 408 (408)
T ss_dssp CCCCCCCC
T ss_pred CCCHHCCC
T ss_conf 76410149
|
| >d1t3ia_ c.67.1.3 (A:) Probable cysteine desulfurase SufS {Synechocystis sp. PCC 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Probable cysteine desulfurase SufS species: Synechocystis sp. PCC 6803 [TaxId: 1148]
Probab=100.00 E-value=0 Score=30802.13 Aligned_cols=1 Identities=0% Similarity=-0.160 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~a~iR~~FP~l~~~~~~~~~iYld~a~~~~~p~~v~~~~~~~~~~~~~n~~s~~~~~~~~~~~~~e~aR~~ia~llg 80 (408)
T d1t3ia_ 1 PSLAATVRQDFPILNQEINGHPLVYLDNAATSQKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFIN 80 (408)
T ss_dssp CCHHHHHGGGCGGGSCEETTEECEECBTTTCCCCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 96278998758256666589986983185115799999999999998668987731519999999999999999999839
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 a~~~~~i~~~~~tt~~~n~~~~~~~~~~~~~g~~il~s~~e~~s~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~l~~~~ 160 (408)
T d1t3ia_ 81 ARSPREIVYTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLL 160 (408)
T ss_dssp CSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHC
T ss_pred CCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHCC
T ss_conf 89821377505307898888764100226899889850354411211344433026825765420123320077764224
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~t~lv~i~~~~~~tG~~~p~~~i~~~~~~~g~~~ivDa~q~~g~~~id~~~~~~D~~~~s~hK~~gp~G~g~l~v~~~ 240 (408)
T d1t3ia_ 161 SEKTKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLIDCDWLVASGHKMCAPTGIGFLYGKEE 240 (408)
T ss_dssp CTTEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGGTTSCTTCEEEEECHH
T ss_pred CCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEECCCEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHH
T ss_conf 89966999965554443358089876565214730453130104643224334678648861432357887411121033
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~~~~~~~ 320 (408)
T d1t3ia_ 241 ILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQ 320 (408)
T ss_dssp HHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred HHHCCCCEECCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 45308965069854344455555557733543478578999999999999999708799999999877677665225764
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~~~~~~~~~~~~~iv~f~~~~~~~~~v~~~L~~~gI~v~~G~~c~~~~~~~~~~~g~vRiS~~~ynt~~did~li~~L 400 (408)
T d1t3ia_ 321 LRLYGPNPKHGDRAALASFNVAGLHASDVATMVDQDGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSL 400 (408)
T ss_dssp EEEESCCGGGSCBCSEEEEEETTBCHHHHHHHHHTTTEECBCSCTTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHH
T ss_conf 23468884446754189999589899999999966996996574225587886069960999799999999999999999
Q ss_pred -------E
Q ss_conf -------8
Q 002647 518 -------G 518 (897)
Q Consensus 518 -------a 518 (897)
.
T Consensus 401 ~~~~~~f~ 408 (408)
T d1t3ia_ 401 QATIRFFS 408 (408)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHHC
T ss_conf 99999759
|
| >d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=30801.04 Aligned_cols=1 Identities=0% Similarity=-0.460 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~~~~~rGvNlGgWlv~E~wi~p~~f~~~~~~~~~~~~~~~de~~~~~~~G~~~~~~~~~~h~~~~ite~D~~ 80 (408)
T d1h4pa_ 1 YYDYDHGSLGEPIRGVNIGGWLLLEPYITPSLFEAFRTNDDNDEGIPVDEYHFCQYLGKDLAKSRLQSHWSTFYQEQDFA 80 (408)
T ss_dssp CCCTTSCTTSSCEEEEECTTSSSCCTTTSHHHHHTTCCCTTCCTTCCSSHHHHHHHHCHHHHHHHHHHHHHHHSCHHHHH
T ss_pred CCCCCCCCCCCEEEEEECCHHHCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHH
T ss_conf 96666787798325886515540466667315554256666555542209999998687889999999885328899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~i~~~G~N~VRiPi~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~gl~VilDlH~~pG~~~~~~~~~~~~~~~~~~~~~ 160 (408)
T d1h4pa_ 81 NIASQGFNLVRIPIGYWAFQILDDDPYVSGLQESYLDQAIGWARNNSLKVWVDLHGAAGSQNGFDNSGLRDSYKFLEDSN 160 (408)
T ss_dssp HHHHTTCCEEEEEEEGGGTCCCTTCCCCCSSHHHHHHHHHHHHHHTTCEEEEEEEECTTCSSCCGGGSSTTCCCTTSHHH
T ss_pred HHHHCCCCEEEEECCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 99977998799854499934778887758158999999999999889989998378998776778877656645578168
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~ia~r~~~~~~~~~v~g~el~NEP~~~~~~~~~~~~~~~~~~~~~iR~~~~~~~~iv~~d~~~~~~~w~~~ 240 (408)
T d1h4pa_ 161 LAVTINVLNYILKKYSAEEYLDIVIGIELINEPLGPVLDMDKMKNDYLAPAYEYLRNNIKSDQVIIIHDAFQPYNYWDDF 240 (408)
T ss_dssp HHHHHHHHHHHHHHTTSHHHHTTEEEEESCSCCCGGGSCHHHHHHHTHHHHHHHHHHTTCCCCCEEEECTTCCTTGGGGS
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHH
T ss_conf 99999999999999631345664234412567665666557789999999999998634668569980687770145554
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~vv~D~H~Y~~f~~~~~~~s~~~~i~~~~~~~~~~~~~~~p~~vGEws~a~td~~~~~n~~g~~~~~~ge~~ 320 (408)
T d1h4pa_ 241 MTENDGYWGVTIDHHHYQVFASDQLERSIDEHIKVACEWGTGVLNESHWIVCGEFAAALTDCIKWLNSVGFGARYDGSWV 320 (408)
T ss_dssp SCGGGTCCSEEEEEEECSCSSHHHHTCCHHHHHHHHHHHHHHHTTCSSEEEEEEECSCSSSCSTTTTCTTCCCTTBTCCC
T ss_pred CCCCCCCCEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEECCCC
T ss_conf 26677786367610223541377556775543311433344543156885243112331104441256554430104413
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~~~~~~~g~c~~~~~~~~~~~~~~~~~r~~~eaQ~~~ye~~~GW~fWt~K~e~~~~W~~~~~~~~g~iP~~~~~~~~~ 400 (408)
T d1h4pa_ 321 NGDQTSSYIGSCANNDDIAYWSDERKENTRRYVEAQLDAFEMRGGWIIWCYKTESSLEWDAQRLMFNGLFPQPLTDRKYP 400 (408)
T ss_dssp BTTBCCCBCSCCTTTTCGGGCCHHHHHHHHHHHHHHHHHHTTTTEEEESCSCCSSCSTTCHHHHHHTTSSCSSTTCCSST
T ss_pred CCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCC
T ss_conf 67767655565446677001778899999999999999984589777852137999878889999787808896124687
Q ss_pred -------E
Q ss_conf -------8
Q 002647 518 -------G 518 (897)
Q Consensus 518 -------a 518 (897)
-
T Consensus 401 ~~cg~~~~ 408 (408)
T d1h4pa_ 401 NQCGTISN 408 (408)
T ss_dssp TGGGSCCC
T ss_pred CCCCCCCC
T ss_conf 75567889
|
| >d1c4oa1 c.37.1.19 (A:2-409) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Tandem AAA-ATPase domain domain: Nucleotide excision repair enzyme UvrB species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=30805.94 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~p~~dqp~aI~~l~~~L~~g~~~~~L~GlsgS~ka~~~A~l~~~~~rp~LvVt~~~~~A~~l~~dL~~~l~~~ 80 (408)
T d1c4oa1 1 TFRYRGPSPKGDQPKAIAGLVEALRDGERFVTLLGATGTGKTVTMAKVIEALGRPALVLAPNKILAAQLAAEFRELFPEN 80 (408)
T ss_dssp CCCCCSCCCCTTHHHHHHHHHHHHHTTCSEEEEEECTTSCHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHHHHHHCTTS
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCC
T ss_conf 96214899998779999999999866997379856888789999999999859999999189999999999999864766
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~v~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~viVv~~~a~l~~l~~~~~~~~~~~~l~~G 160 (408)
T d1c4oa1 81 AVEYFISYYDYYQPEAYVPGKDLYIEKDASINPEIERLRHSTTRSLLTRRDVIVVASVSAIYGLGDPREYRARNLVVERG 160 (408)
T ss_dssp EEEECCCGGGTSCCCEEEGGGTEEECCCCSCCHHHHHHHHHHHHHHHHCSCEEEEEEGGGCSCCCCHHHHHHCCBC----
T ss_pred CEEECCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCHHHHHCEEEEECC
T ss_conf 45567753422575456845554444421034677764446555320467659995112321678818876114885179
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~l~~~L~~~gY~r~~~V~~~GefsvRG~IlDIfp~~~~~P~RIeffgDeIdsIr~Fd~~tQrs~~~~~~~~i~P 240 (408)
T d1c4oa1 161 KPYPREVLLERLLELGYQRNDIDLSPGRFRAKGEVLEIFPAYETEPIRVELFGDEVERISQVHPVTGERLRELPGFVLFP 240 (408)
T ss_dssp --------------------------------------------------------------------------CCCBCC
T ss_pred CEEEHHHHHHHHHHHHCEECCEEECCCEEEEECCCEEECCCCCCCCEEEEEECCCCCEEEEECCCCCCEEEEEEEEEEEC
T ss_conf 89508999999997522214305336605730671276002457637899946733268997278896567655456522
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 a~e~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~Gie~yl~~f~~~~~~e~~~tL~ 320 (408)
T d1c4oa1 241 ATHYLSPEGLEEILKEIEKELWERVRYFEERGEVLYAQRLKERTLYDLEMLRVMGTCPGVENYARYFTGKAPGEPPYTLL 320 (408)
T ss_dssp SCSCCCCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCCTTGGGGHHHHHTCCTTSCCCCGG
T ss_pred CCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHH
T ss_conf 41110135578888876566899999998737416777799999988877875188765777799865778899852466
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 DYlp~~~lv~~De~~~~~~~~~~~~~e~~e~~~~lle~g~~lP~~~d~~~L~~ee~~~~~~q~i~~S~~p~~~e~~~~~~ 400 (408)
T d1c4oa1 321 DYFPEDFLVFLDESHVTVPQLQGMYRGDYARKKTLVDYGFRLPSALDNRPLRFEEFLERVSQVVFVSATPGPFELAHSGR 400 (408)
T ss_dssp GGSCTTCEEEEETHHHHHHHHHHHHHHHHHHHHHHHHTTSSCGGGGGSSCCCHHHHHHTCSEEEEEESSCCHHHHHHCSE
T ss_pred HHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCHHHCCCCC
T ss_conf 51687508999582877999999998899999868757867885434798899999985598899808998422306885
Q ss_pred -------E
Q ss_conf -------8
Q 002647 518 -------G 518 (897)
Q Consensus 518 -------a 518 (897)
-
T Consensus 401 ive~~~Rp 408 (408)
T d1c4oa1 401 VVEQIIRP 408 (408)
T ss_dssp EEEECSCT
T ss_pred EEEEEECC
T ss_conf 47996088
|
| >d2hhva2 e.8.1.1 (A:469-876) DNA polymerase I (Klenow fragment) {Bacillus stearothermophilus, newly identified strain as yet unnamed [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: DNA/RNA polymerases superfamily: DNA/RNA polymerases family: DNA polymerase I domain: DNA polymerase I (Klenow fragment) species: Bacillus stearothermophilus, newly identified strain as yet unnamed [TaxId: 1422]
Probab=100.00 E-value=0 Score=30804.73 Aligned_cols=1 Identities=0% Similarity=-0.227 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~e~ll~~lE~~l~~vLa~ME~~Gi~vD~e~l~~~~~~l~~~~~~le~~i~~~~G~~fN~~S~~ql~~~Lf~~L~l~~~~ 80 (408)
T d2hhva2 1 EQDRLLVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQLGVILFEKLQLPVLK 80 (408)
T ss_dssp TCHHHHHTTHHHHHHHHHHHHHHCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCTTCHHHHHHHHHTTSCCCCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCC
T ss_conf 97689999988899999999984969789999999999999999999999999699679999999999999855999987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~il~~r~~~k~~~~~~~~~~~~~~~~~gRih~~~~~~gt~TGR~s~~~Pnlqn~p~ 160 (408)
T d2hhva2 81 KTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEGLLKVVRPDTKKVHTIFNQALTQTGRLSSTEPNLQNIPI 160 (408)
T ss_dssp BCSSSBCCCHHHHHHHGGGCHHHHHHHHHHHHHHHHHTTTHHHHHHSCTTTCEECCEEESSCCSSSCCEEESSCTTCCCC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCEECCEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 58788655335677750112579999999999888886533324305089985787200357654445557632146777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~r~~~~~~~g~~lv~~DysqiElRvlA~ls~D~~l~~~~~~g~D~h~~~a~~~~~~~~~~~~~~~R~~aK~~ 240 (408)
T d2hhva2 161 RLEEGRKIRQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRRDLDIHTKTAMDIFQVSEDEVTPNMRRQAKAV 240 (408)
T ss_dssp SSHHHHGGGGGEECSSTTEEEEEEEESSHHHHHHHHHHTCHHHHHHHHTTCCHHHHHHHHHHTCCGGGCCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHEEECCCCEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 64335023312113047845887220215199999994888899987744215665455404777888070677889987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~fg~~YG~g~~~l~~~~~~~~~ea~~~~~~~~~~~p~i~~~~~~~~~~a~~~g~~~~~~grrr~~p~~~~~~~~~r~~~~ 320 (408)
T d2hhva2 241 NFGIVYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAE 320 (408)
T ss_dssp HHHHHHCCCHHHHHHHHTCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSEEECTTCCEEECGGGGCSSHHHHHHHH
T ss_pred HHCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCHHHHHHHH
T ss_conf 61533245115546101222788999999998640116255789999999828875467984158865566676767888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 r~a~N~~iQgsaAdi~k~a~~~~~~~l~~~~~~~~lv~~VHDEiv~ev~~~~~~~~~~~~~~~M~~~~~l~vPl~~d~~i 400 (408)
T d2hhva2 321 RMAMNTPIQGSAADIIKKAMIDLNARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVMEQAVTLRVPLKVDYHY 400 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCEEEEECSSEEEEEEEGGGHHHHHHHHHHHHHTSSCCSSCCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC
T ss_conf 87760011489999999999999999984489978999763105899778999999999999995476788807865044
Q ss_pred -------E
Q ss_conf -------8
Q 002647 518 -------G 518 (897)
Q Consensus 518 -------a 518 (897)
-
T Consensus 401 G~~W~e~k 408 (408)
T d2hhva2 401 GSTWYDAK 408 (408)
T ss_dssp ESSTTTCC
T ss_pred CCCHHHCC
T ss_conf 78967759
|
| >d1qs0a_ c.36.1.11 (A:) 2-oxoisovalerate dehydrogenase (E1B), PP module {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiamin diphosphate-binding fold (THDP-binding) superfamily: Thiamin diphosphate-binding fold (THDP-binding) family: Branched-chain alpha-keto acid dehydrogenase PP module domain: 2-oxoisovalerate dehydrogenase (E1B), PP module species: Pseudomonas putida [TaxId: 303]
Probab=100.00 E-value=0 Score=30732.39 Aligned_cols=1 Identities=0% Similarity=-1.357 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~p~~~~~p~p~~rp~~~~d~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~vrvld~~g~~~~~~~~~l~~e~l~~~y 80 (407)
T d1qs0a_ 1 NEYAPLRLHVPEPTGRPGCQTDFSYLRLNDAGQARKPPVDVDAADTADLSYSLVRVLDEQGDAQGPWAEDIDPQILRQGM 80 (407)
T ss_dssp CCSCCCCCCCCCCSCCTTSCCCGGGSCCCCTTCSCCCCTTCCGGGGHHHHTSCBCCBCTTSCBCSGGGSSCCHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 99898545799999999988885445568876679995568911244245670899899998998778998999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 r~M~~~R~~d~~~~~l~rqG~i~~~~~~~GqEA~~vg~~~aL~~~D~~f~~yR~~g~~larG~~~~~~~~e~~g~~~g~~ 160 (407)
T d1qs0a_ 81 RAMLKTRIFDSRMVVAQRQKKMSFYMQSLGEEAIGSGQALALNRTDMCFPTYRQQSILMARDVSLVEMICQLLSNERDPL 160 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSSCCCCCTTTHHHHHHHHHHSCTTSEEECCSSCHHHHHHTTCCHHHHHHHHHTCTTCTT
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999999999999669730668998849999999986797798982545799999987619999999862457877
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~Gr~~~~h~~~~~~~~~~~s~~vg~q~p~AvG~A~a~k~~~~~~v~v~~~GDGa~~eG~f~EalN~A~~~~lPvifv~eN 240 (407)
T d1qs0a_ 161 KGRQLPIMYSVREAGFFTISGNLATQFVQAVGWAMASAIKGDTKIASAWIGDGATAESDFHTALTFAHVYRAPVILNVVN 240 (407)
T ss_dssp TTCSCTTCCCBGGGTBCCCCSSSSHHHHHHHHHHHHHHHTTCCCCEEEEEETGGGGSHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred CCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEE
T ss_conf 78875443355323200025653346623356677776516760101245655433201888999873057626999987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 N~~aist~~~~~~~~~~~~~~ra~~~Gi~~~~VDGnD~~avy~a~~~A~e~aR~g~gP~lIE~~TyR~~gHs~sDD~~~Y 320 (407)
T d1qs0a_ 241 NQWAISTFQAIAGGESTTFAGRGVGCGIASLRVDGNDFVAVYAASRWAAERARRGLGPSLIEWVTYRAGPHSTSDDPSKY 320 (407)
T ss_dssp CSEETTEEGGGGTTTTCCSTHHHHHTTCEEEEEETTCHHHHHHHHHHHHHHHHTTSCCEEEEEECCCCSCSSTTCCGGGT
T ss_pred ECCCCCCCCHHHHCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCC
T ss_conf 02301364111200100688888861865278625439999999998889985389746997741018988765554345
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 R~~~E~~~w~~~DPI~rl~~~Li~~g~~se~e~~~i~~ei~~eV~~A~~~Ae~~~~~~~~p~P~~~~lf~~VY~e~p~~l 400 (407)
T d1qs0a_ 321 RPADDWSHFPLGDPIARLKQHLIKIGHWSEEEHQATTAEFEAAVIAAQKEAEQYGTLANGHIPSAASMFEDVYKEMPDHL 400 (407)
T ss_dssp SCTTHHHHCTTCCHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHTTCCSSSCCCCCSSGGGSSSSSSCCHHH
T ss_pred CCHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHH
T ss_conf 89999998883897999999999879999999999999999999999999987221036899699999845225999889
Q ss_pred ------E
Q ss_conf ------8
Q 002647 518 ------G 518 (897)
Q Consensus 518 ------a 518 (897)
-
T Consensus 401 ~eQ~~el 407 (407)
T d1qs0a_ 401 RRQRQEL 407 (407)
T ss_dssp HHHHHTC
T ss_pred HHHHHHC
T ss_conf 9999739
|
| >d1eu8a_ c.94.1.1 (A:) D-maltodextrin-binding protein, MBP {Archaeon Thermococcus litoralis [TaxId: 2265]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Periplasmic binding protein-like II superfamily: Periplasmic binding protein-like II family: Phosphate binding protein-like domain: D-maltodextrin-binding protein, MBP species: Archaeon Thermococcus litoralis [TaxId: 2265]
Probab=100.00 E-value=0 Score=30724.80 Aligned_cols=1 Identities=0% Similarity=-1.125 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~g~i~~~~~g~p~~~~~~~~~i~~F~~~~p~i~V~~~~~~~~~~~~~~~~~~~~~a~g~~PDi~~~~~~~~~~~~~~g 80 (407)
T d1eu8a_ 1 IEEGKIVFAVGGAPNEIEYWKGVIAEFEKKYPGVTVELKRQATDTEQRRLDLVNALRGKSSDPDVFLMDVAWLGQFIASG 80 (407)
T ss_dssp CCSSEEEEEECCSHHHHHHHHHHHHHHHHHSTTCEEEEEECCSSHHHHHHHHHHHHTTTCSSEEEEEEETTTHHHHHHHT
T ss_pred CCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCC
T ss_conf 97426999978976699999999999998886918999973684599999999999828999879998948899999879
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~l~dL~~~~~~~~~~~~~~~~~~~~~~~~~dG~~y~iP~~~~~~~~~yNkdl~~~~G~~~p~~T~de~~~~~~~l~~~~~ 160 (407)
T d1eu8a_ 81 WLEPLDDYVQKDNYDLSVFFQSVINLADKQGGKLYALPVYIDAGLLYYRKDLLEKYGYSKPPETWQELVEMAQKIQSGER 160 (407)
T ss_dssp CBCCSHHHHHHHTCCGGGBCHHHHHHHTEETTEECCEEEEEEECEEEEEHHHHHHTTCCSCCSBHHHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHCCHHHHHHCHHHHHHHHCCCCEEECCCCCHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 93338576553113255404889987513454230276301234554161255542157988899999999999873045
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~ 240 (407)
T d1eu8a_ 161 ETNPNFWGFVWQGKQYEGLVCDFVEYVYSNGGSLGEFKDGKWVPTLNKPENVEALQFMVDLIHKYKISPPNTYTEMTEEP 240 (407)
T ss_dssp TTCTTCEEEECCCSSSHHHHHHHHHHHHTTTCCSEEEETTEEEECTTCHHHHHHHHHHHHHHHTSCCSCGGGGTTCCHHH
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
T ss_conf 76775221234555544302446789984488611024677521469999999999999999705657632000001577
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~f~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~i~~~s~~~~~A~~fl~~l~s~e~ 320 (407)
T d1eu8a_ 241 VRLMFQQGNAAFERNWPYAWGLHNADDSPVKGKVGVAPLPHFPGHKSAATLGGWHIGISKYSDNKALAWEFVKFVESYSV 320 (407)
T ss_dssp HHHHHHTTCEEEEEECTHHHHHHTSTTCTTTTCEEEECCCBCTTSCCCCBEEEEEEEEBTTCSCHHHHHHHHHHHTSHHH
T ss_pred HHHHHHCCCEEEECCCCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCEECCCEEEEECCCCCHHHHHHHHHHHHHHHH
T ss_conf 99998568745742572888765320145455534411125678654311304202676787549999999874002789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~eal~~~~~~ 400 (407)
T d1eu8a_ 321 QKGFAMNLGWNPGRVDVYDDPAVVSKSPHLKELRAVFENAVPRPIVPYYPQLSEIIQKYVNSALAGKISPQEALDKAQKE 400 (407)
T ss_dssp HHHHHHHTCCCBSBTTGGGSHHHHHHCTHHHHTHHHHHTCBCCCCCTTHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCHHHHHCHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf 99999851888662777739875611967999999997285278888789999999999999985999999999999999
Q ss_pred ------E
Q ss_conf ------8
Q 002647 518 ------G 518 (897)
Q Consensus 518 ------a 518 (897)
=
T Consensus 401 ~~~~l~~ 407 (407)
T d1eu8a_ 401 AEELVKQ 407 (407)
T ss_dssp HHHHHTC
T ss_pred HHHHHCC
T ss_conf 9999576
|
| >d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclodextrin glycosyltransferase species: Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]
Probab=100.00 E-value=0 Score=30721.17 Aligned_cols=1 Identities=0% Similarity=-1.390 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~v~Y~i~~drF~~gd~~~~~~~~~~~~~~~~~~~~~~~~gGd~~gi~~kLdyl~~LGv~~I~L~Pi~~~~~~ 80 (407)
T d1qhoa4 1 SSSASVKGDVIYQIIIDRFYDGDTTNNNPAKSYGLYDPTKSKWKMYWGGDLEGVRQKLPYLKQLGVTTIWLSPVLDNLDT 80 (407)
T ss_dssp CTTSCCTTCCEEEECGGGTCCSCGGGSSCGGGTTCBCTTSCSTTSBCCCCHHHHHHTHHHHHHHTCCEEEECCCEEECSS
T ss_pred CCCHHHCCCEEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf 97132057779996355506799877766555455577655667657848999998799999769988996965207765
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~gY~~~d~~~id~~~Gt~~d~k~Lv~~~H~~Gi~VilD~V~NH~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (407)
T d1qhoa4 81 LAGTDNTGYHGYWTRDFKQIEEHFGNWTTFDTLVNDAHQNGIKVIVDFVPNHSTPFKANDSTFAEGGALYNNGTYMGNYF 160 (407)
T ss_dssp CSSTTCCCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECTTEEEEEBTTBTTSTTTTCEEETTEEEECSS
T ss_pred CCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 67889988774012224777778998899999999866302113331201455677622222223676556676555555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~n~~v~~~~~~~~~~w~~~gvDGfR~D~~~~~~~~f~~~ 240 (407)
T d1qhoa4 161 DDATKGYFHHNGDISNWDDRYEAQWKNFTDPAGFSLADLSQENGTIAQYLTDAAVQLVAHGADGLRIDAVKHFNSGFSKS 240 (407)
T ss_dssp SCTTTCCBCCSCBCSCTTCHHHHHHSBCEETTTEEEEEBCTTSHHHHHHHHHHHHHHHHTTCCEEEETTGGGSCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
T ss_conf 65555422246777786645342234456776655700332025678999876777865315643101101251467899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~i~~~~~~~~~gE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 320 (407)
T d1qhoa4 241 LADKLYQKKDIFLVGEWYGDDPGTANHLEKVRYANNSGVNVLDFDLNTVIRNVFGTFTQTMYDLNNMVNQTGNEYKYKEN 320 (407)
T ss_dssp HHHHHHHHCCCEEEECCCCCCTTSTTHHHHHHHHHHSSCEEBCHHHHHHHHHHHTSCSSCHHHHHHHHHHHHHHCTTGGG
T ss_pred HHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHH
T ss_conf 99999742685345565588735667777631135665412102577888887640220146788999875201345202
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~f~~nHD~~R~~~~~~~~~~~~~a~a~ll~~pGiP~iyyGdE~G~~g~~d~~~r~~~~~~~~~~~~~~~~~~L~~lR~ 400 (407)
T d1qhoa4 321 LITFIDNHDMSRFLSVNSNKANLHQALAFILTSRGTPSIYYGTEQYMAGGNDPYNRGMMPAFDTTTTAFKEVSTLAGLRR 400 (407)
T ss_dssp CEECSCCTTSCCHHHHCCCHHHHHHHHHHHHHSSSEEEEETTGGGTCCCCSTTTTCCCCCCCCTTSHHHHHHHHHHHHHH
T ss_pred HCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 12000368854401124899999999999997279868863874397899895410137866688599999999999985
Q ss_pred ------E
Q ss_conf ------8
Q 002647 518 ------G 518 (897)
Q Consensus 518 ------a 518 (897)
=
T Consensus 401 ~~paLr~ 407 (407)
T d1qhoa4 401 NNAAIQY 407 (407)
T ss_dssp HCHHHHH
T ss_pred HCHHHCC
T ss_conf 0984474
|
| >d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme-dependent peroxidases superfamily: Heme-dependent peroxidases family: Catalase-peroxidase KatG domain: Catalase-peroxidase KatG species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=100.00 E-value=0 Score=30652.13 Aligned_cols=1 Identities=0% Similarity=0.370 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~~~~~~~~p~~~~~~~l~~~~~~~~p~~~~~~y~~~~~~~d~~~~~~di~~l~~~~~~~wpaD~g~~gP~lVRlAWHs 80 (406)
T d1itka1 1 KRPKSNQDWWPSKLNLEILDQNARDVGPVEDDFDYAEEFQKLDLEAVKSDLEELMTSSQDWWPADYGHYGPLFIRMAWHS 80 (406)
T ss_dssp CCCCCHHHHCTTSCCTHHHHTTSCCCSSCCTTCCHHHHHHHCCHHHHHHHHHHHHTCCBTTBCCGGGCCHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 99986566586444773245687667989988678999876449999999999974433357544466313676555553
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 AgTYR~sD~RGGanGariRfaPe~sW~~N~~LdkAr~lLepIK~kyg~~IS~ADLivLAG~vAiE~~ggp~i~f~~GR~D 160 (406)
T d1itka1 81 AGTYRTADGRGGAAGGRQRFAPINSWPDNANLDKARRLLLPIKQKYGQKISWADLMILAGNVAIESMGFKTFGYAGGRED 160 (406)
T ss_dssp HTTCCTTTCCCSSTTCGGGSTTGGGCGGGTTHHHHHHHTHHHHHHHGGGSCHHHHHHHHHHHHHHHTTCCCSCCCBCCCC
T ss_pred HCCEECCCCCCCCCCCEECCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHEEHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 10011257888998762575666266777422999999999998627355443042000155564426863224557765
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 a~~~~~d~~~g~~~e~~~d~~~~~~~~l~~pl~a~~~~liyv~Peg~~g~~d~~~~a~~lrd~f~rMgl~d~E~VALigG 240 (406)
T d1itka1 161 AFEEDKAVNWGPEDEFETQERFDEPGEIQEGLGASVMGLIYVNPEGPDGNPDPEASAKNIRQTFDRMAMNDKETAALIAG 240 (406)
T ss_dssp CSSCCTTCCCCSCSSTTCCCSCSSTTCCCTTCSCSSTTCSSSCTTCGGGCCCHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHC
T ss_conf 55655554557655656666677655555430013235555688665677884115899999999824881999998750
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~htlG~~hg~~~~~~~~g~~Pe~~~~~~~g~g~~~~~~~g~g~~~~~sG~~G~wT~~p~~~~N~yF~~Ll~~~w~~~~s~ 320 (406)
T d1itka1 241 GHTFGKVHGADDPEENLGPEPEAAPIEQQGLGWQNKNGNSKGGEMITSGIEGPWTQSPTEWDMGYINNLLDYEWEPEKGP 320 (406)
T ss_dssp HTTSCEECBSSCHHHHBCCCGGGSCGGGTTCCCCBCC-------CBSSSCCEESSSSTTSCSSHHHHHHHHSCEEEEECT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEECC
T ss_conf 24246335788743357878655544346764457888775765545775544455434345612100135565410036
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~g~~~~~~~~~~~~~~~pda~~~~~~~~~~ml~tDlaL~~Dp~~R~iaE~YA~d~e~F~~DFa~Aw~KL~~~D~gp~~ry 400 (406)
T d1itka1 321 GGAWQWAPKSEELKNSVPDAHDPDEKQTPMMLTTDIALKRDPDYREVMETFQENPMEFGMNFAKAWYKLTHRDMGPPERF 400 (406)
T ss_dssp TSCEEEEESSSTTTTCEECSSCTTCEECCCBCHHHHHHHHSHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTSCSGGGC
T ss_pred CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 77437526776544577756566775577503667876009878999999960999999999999999972678983345
Q ss_pred -----E
Q ss_conf -----8
Q 002647 518 -----G 518 (897)
Q Consensus 518 -----a 518 (897)
-
T Consensus 401 ~gp~~p 406 (406)
T d1itka1 401 LGPEVP 406 (406)
T ss_dssp BSTTCC
T ss_pred CCCCCC
T ss_conf 799999
|
| >d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme-dependent peroxidases superfamily: Heme-dependent peroxidases family: Catalase-peroxidase KatG domain: Catalase-peroxidase KatG species: Burkholderia pseudomallei [TaxId: 28450]
Probab=100.00 E-value=0 Score=30652.12 Aligned_cols=1 Identities=0% Similarity=-0.427 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~wp~~~~~~~l~~~~~~~~p~~~~~~y~~~~~~lD~~alk~di~~l~~~s~d~wpaD~G~ygp~lVRlAWHsA 80 (406)
T d1mwva1 1 NGTSNRDWWPNQLDLSILHRHSSLSDPMGKDFNYAQAFEKLDLAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSA 80 (406)
T ss_dssp CCCCHHHHCTTSCCGGGGSCSCGGGCCSCTTCCHHHHHHTSCHHHHHHHHHHHHTCCBTTBCCGGGCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99886666831138741356876569898887789998750599999999999745321475534662168998888763
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 gTYR~~D~RGGanGg~iRfaPe~sW~~N~~Ldkar~lLepIK~ky~~~IS~ADLivLAG~vAiE~~Gg~~i~f~~GR~d~ 160 (406)
T d1mwva1 81 GTYRTADGRGGAGEGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMGFKTFGFAGGRADT 160 (406)
T ss_dssp TTCCTTTCCCSSTTCGGGSTTGGGCGGGTTHHHHHHHTHHHHHHHGGGSCHHHHHHHHHHHHHHHTTCCCCCCCBCCCCC
T ss_pred CCCCCCCCCCCCCCCEECCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHCCCCCCCCCCCCCC
T ss_conf 24104579889987615775443578754679999999999997477754233256620788987369813777676664
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Plaa~~~gliyvnpeg~~g~pd~~~~a~~lrd~f~rMglnd~E~vAL 240 (406)
T d1mwva1 161 WEPEDVYWGSEKIWLELSGGPNSRYSGDRQLENPLAAVQMGLIYVNPEGPDGNPDPVAAARDIRDTFARMAMNDEETVAL 240 (406)
T ss_dssp SSCCCCCCCSCSSTTCCTTSTTCSEETTTEECTTCCSSSTTCSSSCTTSGGGCCCHHHHHHHHHHHHHTTTCCHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 33223556644443454456544566753334764444456666687645688970235899999987606870889999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 i~G~HtlG~~hg~~~~~~~g~~pe~~~~~~~g~gw~~~~~~g~~~~~~~sg~eG~wT~~P~~~dN~yF~~Ll~~~we~~~ 320 (406)
T d1mwva1 241 IAGGHTFGKTHGAGPASNVGAEPEAAGIEAQGLGWKSAYRTGKGADAITSGLEVTWTTTPTQWSHNFFENLFGYEWELTK 320 (406)
T ss_dssp HHHHTTSCBCCBSSCGGGBCCCGGGSCGGGTTCCCCBCSTTSSGGGCBSSSCCCBCCSCTTSCCSHHHHHHHHSCEEEEE
T ss_pred HHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCEEEC
T ss_conf 86432211135788510047754567510025666666554577766778873676799761116888656447645520
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 s~~g~~q~~~~~~~~~~pda~~~s~~~~~~ml~tDlal~~Dp~~R~iaE~YA~d~e~F~~dFa~AW~KLm~~Dmgp~~~y 400 (406)
T d1mwva1 321 SPAGAHQWVAKGADAVIPDAFDPSKKHRPTMLTTDLSLRFDPAYEKISRRFHENPEQFADAFARAWFKLTHRDMGPRARY 400 (406)
T ss_dssp CTTCCEEEEETTCCSCEECSSCTTCEECCEECHHHHHHHHSHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTSCSGGGC
T ss_pred CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCHHC
T ss_conf 45655245645755577766588777476402443333029888999999962999999999999999974688980202
Q ss_pred -----E
Q ss_conf -----8
Q 002647 518 -----G 518 (897)
Q Consensus 518 -----a 518 (897)
-
T Consensus 401 ~g~~~p 406 (406)
T d1mwva1 401 LGPEVP 406 (406)
T ss_dssp BSTTCC
T ss_pred CCCCCC
T ss_conf 699999
|
| >d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=30652.10 Aligned_cols=1 Identities=0% Similarity=-0.427 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 80 (406)
T d1u2za_ 1 SSTFVDWNGPCLRLQYPLFDIEYLRSHEIYSGTPIQSISLRTNSPQPTSLTSDNDTSSVTTAKLQSILFSNYMEEYKVDF 80 (406)
T ss_dssp CCBSSCTTSCEEECCSCCBCHHHHHHCCCCCCCCCCGGGCCC------------------EEEEECSSCTTCEEEEECCS
T ss_pred CCCCCCCCCCCCCCCCCEECHHHHHHHHHCCCCCCCCCCEECCCCCHHHHCCCCCCCCCCEEEEEECCCCCCEEEEEEEC
T ss_conf 97532587743465553020665310553379877772000477771443068876898605887324666103788850
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~p~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~~~~l~~~~ 160 (406)
T d1u2za_ 81 KRSTAIYNPMSEIGKLIEYSCLVFLPSPYAEQLKETILPDLNASFDNSDTKGFVNAINLYNKMIREIPRQRIIDHLETID 160 (406)
T ss_dssp SSCCSSSCHHHHHHHHHHHHHHTTCCTTHHHHHHHHTHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHTTCC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 56524569899999999999986488489999999999999998742799999999999999999866615988876267
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~i~~~~y~r~v~p~~~~L~~Y~~fs~~vYGEl~~~~i~~Il~~l~Lkpgd~fLDLGCG~G~~vl~aA~~~g~ 240 (406)
T d1u2za_ 161 KIPRSFIHDFLHIVYTRSIHPQANKLKHYKAFSNYVYGELLPNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGC 240 (406)
T ss_dssp EEEHHHHHHHHHHHHHHHTGGGGGGGCSCCSSGGGCCCCBCHHHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCC
T ss_pred CCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCC
T ss_conf 88889999998886446036886776266789977403478899999999838999998996789875999999997699
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~~~f~~~~~~d~~~~~adVV~inn~~f~~~l~~~L~ei~ 320 (406)
T d1u2za_ 241 ALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAELIPQCDVILVNNFLFDEDLNKKVEKIL 320 (406)
T ss_dssp SEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHHHGGGCSEEEECCTTCCHHHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHH
T ss_conf 76999848999999999999987555555303566520334404221654224545643999733167367999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 r~LKPGGrIVs~~~~~~~~~~it~r~~~~~~~il~v~~~~~~~~sVSWt~~~v~yyl~tv~~~i~~~~f~~~~~~R~~r~ 400 (406)
T d1u2za_ 321 QTAKVGCKIISLKSLRSLTYQINFYNVENIFNRLKVQRYDLKEDSVSWTHSGGEYYISTVMEDVDESLFSPAARGRRNRG 400 (406)
T ss_dssp TTCCTTCEEEESSCSSCTTCCCCSSSTTCGGGGEEEEEEECCTTCBTTBSSCCEEEEEEECSSCCGGGSCCC------C-
T ss_pred HHCCCCCEEEEECCCCCCCHHHHHHCCCCCHHCCCCHHHCCCCCCCEEECCCCCEEHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 72699828999114678740145520353000033132145336633466987653739998888721462113553347
Q ss_pred -----E
Q ss_conf -----8
Q 002647 518 -----G 518 (897)
Q Consensus 518 -----a 518 (897)
-
T Consensus 401 ~P~kyt 406 (406)
T d1u2za_ 401 TPVKYT 406 (406)
T ss_dssp --CCBC
T ss_pred CCCCCC
T ss_conf 888889
|
| >d1ei6a_ c.76.1.4 (A:) Phosphonoacetate hydrolase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Alkaline phosphatase-like superfamily: Alkaline phosphatase-like family: Phosphonoacetate hydrolase domain: Phosphonoacetate hydrolase species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=0 Score=30651.59 Aligned_cols=1 Identities=0% Similarity=0.105 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~vi~I~iD~l~~~~l~~~~~~~~TPnid~La~~G~~f~~~~~~~~~c~PsrasllTG~yp~~hG 80 (406)
T d1ei6a_ 1 TNLISVNSRSYRLSSAPTIVICVDGCEQEYINQAIQAGQAPFLAELTGFGTVLTGDCVVPSFTNPNNLSIVTGAPPSVHG 80 (406)
T ss_dssp CCEEEETTEEEECCSSCEEEEECTTCCHHHHHHHHHTTSCHHHHHGGGTSEEEEEECCSSCCHHHHHHHHHHTSCHHHHC
T ss_pred CCEEEECCCCCCCCCCCEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCHHHCC
T ss_conf 96484786104678998899997899978874005557991899999689348322049971589999999678988879
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (406)
T d1ei6a_ 81 ICGNFFFDQETQEEVLMNDAKYLRAPTILAEMAKAGQLVAVVTAKDKLRNLLGHQLKGICFSAEKADQVNLEEHGVENIL 160 (406)
T ss_dssp CCSSEEEETTTTEEEECCSGGGCCSCCHHHHHHHTTCCEEEEESSHHHHHHHTTTCCSEEEESTTCSSCCHHHHSCCCHH
T ss_pred CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 57775446554410100332123456544311123465302114565645555430321456567786523444543221
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~i~~l~~~~~~~~~~~d 240 (406)
T d1ei6a_ 161 ARVGMPVPSVYSADLSEFVFAAGLSLLTNERPDFMYLSTTDYVQHKHAPGTPEANAFYAMMDSYFKRYHEQGAIVAITAD 240 (406)
T ss_dssp HHHTCCCCCSSSTHHHHHHHHHHHHHHHTTCCSEEEEECCCHHHHHSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
T ss_conf 10233222123332102444432220247884201123433334456899889999999999999999867966999934
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (406)
T d1ei6a_ 241 HGMNAKTDAIGRPNILFLQDLLDAQYGAQRTRVLLPITDPYVVHHGALGSYATVYLRDAVPQRDAIDFLAGIAGVEAVLT 320 (406)
T ss_dssp CCCEECBCTTSCBCEEEHHHHHHHHHCTTSEEEECTTSCTTCCBGGGCBSEEEEEECTTSCHHHHHHHHHTSTTEEEEEE
T ss_pred CCCCCCCCCCCCCHHHHCCCCCHHHCCCCCCCCCCCCCCCCEEECCCCCCHHHHHCCCHHHHHHHHHHHHHCCCHHHHCC
T ss_conf 54345675223320232144201110110000245422210000122320234313327899999998752365223304
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~~~~~~~~~~~~igdii~~sd~g~~lg~~~~~~~~s~~~~~~~~hGg~~e~~VPlIi~~P~~~~~~~~~i~~~Di~d~ 400 (406)
T d1ei6a_ 321 RSQACQRFELPEDRIGDLVVLGERLTVLGSAADKHDLSGLTVPLRSHGGVSEQKVPLIFNRKLVGLDSPGRLRNFDIIDL 400 (406)
T ss_dssp HHHHHHHHTCCGGGSCSEEEEECTTCEEESCTTTCBGGGCCSCCEECCSGGGCEEEEEESSCBCCCC--CCCBGGGHHHH
T ss_pred HHHHHHHCCCCCCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEECHHHH
T ss_conf 98999973999787466999956996877455445433467767565651147308799558656777884325061887
Q ss_pred -----E
Q ss_conf -----8
Q 002647 518 -----G 518 (897)
Q Consensus 518 -----a 518 (897)
+
T Consensus 401 ~~~~~~ 406 (406)
T d1ei6a_ 401 ALNHLA 406 (406)
T ss_dssp HHHCBC
T ss_pred HHHHCC
T ss_conf 763039
|
| >d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme-dependent peroxidases superfamily: Heme-dependent peroxidases family: Catalase-peroxidase KatG domain: Catalase-peroxidase KatG species: Synechococcus sp. pcc 7942 [TaxId: 1140]
Probab=100.00 E-value=0 Score=30651.36 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~wp~~~~~~~l~q~~~~~~p~~~~~~y~~~~~~ld~a~k~Dl~~l~~~s~~~wpaD~G~ygP~lVRlAWhsAgTYR 80 (406)
T d1ub2a1 1 STAEWWPKALNLDILSQHDRKTNPMGPDFNYQEEVQKLDAALKQDLQALMTDSQDWWPADWGHYGGLMIRLTWHAAGTYR 80 (406)
T ss_dssp CTTSSCTTSCCGGGGSCSCTTTCCSCTTCCHHHHHTTSCSTTHHHHHHHTTCCCTTSCCGGGCCHHHHHHHHHHHHTTCC
T ss_pred CCCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf 97555887768521015887679899997889999999999999999997455234755457621377865554014321
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~sD~RGGanGgriRfaP~~sW~~N~~LdkAr~lL~pIK~ky~~~IS~ADLivLAG~vAiE~agg~ti~f~~GR~Da~~~~ 160 (406)
T d1ub2a1 81 IADGRGGAGTGNQRFAPLNSWPDNTNLDKARRLLWPIKQKYGNKLSWADLIAYAGTIAYESMGLKTFGFAFGREDIWHPE 160 (406)
T ss_dssp TTTCCCSSTTCGGGSTTGGGCGGGTTHHHHHHHTHHHHHHHGGGSCHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCSSCC
T ss_pred CCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 67898899877446822304566318899999998887642876531137776129999873498335677766666776
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~dv~~g~~~e~l~~~~~~~~~~~~~~~l~~pl~a~~~~liyvnP~g~~g~pd~~~~a~~ir~~f~rM~mnd~E~vAL~aG 240 (406)
T d1ub2a1 161 KDIYWGPEKEWFPPSTNPNSRYTGDRELENPLAAVTMGLIYVNPEGVDGNPDPLKTAHDVRVTFARMAMNDEETVALTAG 240 (406)
T ss_dssp TTCCCCSCSSSSCCSSSTTCSEETTTEECTTCCSSSTTCSSCCTTSBTTBCCHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 55455554455788767544467754322465420157311177534678974555788655677753788998642153
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~ht~Gk~hg~~~~~~~g~~p~g~~~e~~g~~~~n~~~~g~g~~t~tSg~eg~wt~~p~~~dn~yF~~ll~~~~W~~~ks~ 320 (406)
T d1ub2a1 241 GHTVGKCHGNGNAALLGPEPEGADVEDQGLGWINKTQSGIGRNAVTSGLEGAWTPHPTQWDNGYFAVCSLNYDWELKKNP 320 (406)
T ss_dssp HHTSCCBCBCSCSTTBCCCGGGSCGGGTTCCSCBCSSCCSGGGCBSSSCCBBSSSCTTSCSSTTTTTTTSSSCEEEEECT
T ss_pred HHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHCCCCC
T ss_conf 31002136777501237655565410067766777773646666688888777656443467412333205640102453
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~ga~q~~~~~~~~~~~~~~~~d~s~~~~~~mt~tDLal~~Dp~~R~iaE~Ya~d~e~F~~dFa~AW~KL~~~Dmgp~~~~ 400 (406)
T d1ub2a1 321 AGAWQWEPINPREEDLPVDVEDPSIRRNLVMTDADMAMKMDPEYRKISERFYQDPAYFADVFARAWFKLTHRDMGPKARY 400 (406)
T ss_dssp TSCEEEEESSCCGGGSCBCSSCTTSBCCBCBCHHHHHHHHSHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTSCSGGGC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHC
T ss_conf 30114455675323477755477777577503567763108878999999971999999999999999971677976531
Q ss_pred -----E
Q ss_conf -----8
Q 002647 518 -----G 518 (897)
Q Consensus 518 -----a 518 (897)
-
T Consensus 401 ~g~~~p 406 (406)
T d1ub2a1 401 IGPDVP 406 (406)
T ss_dssp BSTTCC
T ss_pred CCCCCC
T ss_conf 799999
|
| >d2ayia1 e.60.1.1 (A:3-408) Aminopeptidase T {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Thermophilic metalloprotease-like superfamily: Thermophilic metalloprotease-like family: Thermophilic metalloprotease (M29) domain: Aminopeptidase T species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=30648.44 Aligned_cols=1 Identities=0% Similarity=-1.290 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~L~k~A~llV~~~l~vqkGe~VlI~a~~~~~~Lvral~e~A~~~GA~pv~v~~~d~~i~r~~~~~a~~e~l~~~p~ 80 (406)
T d2ayia1 1 AFKRNLEKLAELAIRVGLNLEKGQEVIATAPIEAVDFVRLLAEKAYREGASLFTVIYGDQELARKRLALAPEEGLDKAPA 80 (406)
T ss_dssp CCHHHHHHHHHHHHHTTTCCCTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEEECCHHHHHHHHHHSCTTCTTCCCH
T ss_pred CHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCHHHHHHCCH
T ss_conf 96799999999999971268999989997166569999999999998699738996067699999996399988743624
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~a~i~I~~~np~~l~~vdp~ki~~~~ka~~~~~~~~~~~~~~~~~~W~i~~~P~~~~A~~~~~~l~~ 160 (406)
T d2ayia1 81 WLYEGMARAFREGAARLAVSGSDPKALEGLPPEKVGRAQKANARAYKPALEAITEFVTNWTIVPFAHPGWARAVFPGLPE 160 (406)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSSCBCBEECCCTTTHHHHCCCSCH
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCCCH
T ss_conf 46889999997189289961698520126996899999998899879999998536566399975782177661789767
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~e~~~~l~d~if~~~~ld~~dp~~~w~~~~~~l~~~~~~L~~~~~~~~~~~~~GTDL~~~i~~~~~w~~~~~~~~~g~~~ 240 (406)
T d2ayia1 161 EEAVRRLWEAIFQATRADQEDPIAAWEAHNRALHEKVAYLNARRFHALHFKGPGTDLVVGLAEGHLWQGGATATKGGRLC 240 (406)
T ss_dssp HHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHHHHHTTCSEEEEEETTEEEEEECCTTBCCEESSCCCSSSCCC
T ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCC
T ss_conf 89999999999976346651079999999999999999985165148996389369999945884015887642278767
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~NlP~GEvftaP~e~svnG~i~~d~~~~~~g~l~~~i~l~f~~G~vv~~~~~~~~~~l~~~~~~d~~a~~lgE~~ig~n 320 (406)
T d2ayia1 241 NPNLPTEEVFTAPHRERVEGVVRASRPLALGGTLVEGIFARFERGFAVEVRAEKGEEVLRRLLDTDEGARRLGEVALVPA 320 (406)
T ss_dssp CSBSSCCCEEECCCTTCEEEEEECSSCEEETTEEEBSCEEEEETTEEEEEECSBCHHHHHHHTTSSSGGGSEEEEECCCT
T ss_pred CCCCCCCCEEEEECCCCEEEEEECCCCCCCCCEECCCCEEEEECCEEEEEECCCHHHHHHHHHHCCCCCCEEEEEEEECC
T ss_conf 68899832585020484211998045454433303473799948879997557649999987624867636788876047
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~~~~~~~~~~n~L~DE~gt~Hia~G~~Y~~~~~g~~~~~~~~~~g~n~s~~H~D~~~~~~~~~~dgv~~dG~~~~i~~ 400 (406)
T d2ayia1 321 DNPIAKTGLVFFDTLFDENAASHIAFGQAYQENLEGRPSGEAFRKRGGNESLVHVDWMIGSEEMDVDGLYEDGTRTPLMR 400 (406)
T ss_dssp TSHHHHHTCCCCCHHHHHTTSCEEEEECCCGGGBCC---CCSHHHHTCCCCSCEEEEECCCTTCEEEEECTTSCEEEEEE
T ss_pred CCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCEEEEEEEEECCCEEEEEE
T ss_conf 88540345111330587478604766876411134788756763079806644786713887178999984891889988
Q ss_pred -----E
Q ss_conf -----8
Q 002647 518 -----G 518 (897)
Q Consensus 518 -----a 518 (897)
-
T Consensus 401 ~G~f~i 406 (406)
T d2ayia1 401 RGRWVV 406 (406)
T ss_dssp TTEECC
T ss_pred CCEEEC
T ss_conf 989969
|
| >d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclodextrin glycosyltransferase species: Thermoanaerobacterium [TaxId: 28895]
Probab=100.00 E-value=0 Score=30642.65 Aligned_cols=1 Identities=0% Similarity=-1.523 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~~viY~i~~drF~~g~~~~d~~~~~~~~~~~~~~~~~gGdl~Gi~~kLd~~YLk~LGv~~I~L~Pi~ 80 (406)
T d3bmva4 1 ASDTAVSNVVNYSTDVIYQIVTDRFVDGNTSNNPTGDLYDPTHTSLKKYFGGDWQGIINKINDGYLTGMGVTAIWIPQPV 80 (406)
T ss_dssp CCTTSTTCTTCCTTCCEEECCGGGTCCCCGGGSCCGGGBCTTSCSTTSBCCCCHHHHHHHHHTSTTGGGTCCEEEECCCE
T ss_pred CCCCCCCCCCCCCCCEEEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHCCCCEEEECCCC
T ss_conf 98766678888753708996123306899777878876577777657667858999987448888987597789979753
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~gY~~~d~~~vdp~~Gt~~dfk~LV~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~ 160 (406)
T d3bmva4 81 ENIYAVLPDSTFGGSTSYHGYWARDFKRTNPYFGSFTDFQNLINTAHAHNIKVIIDFAPNHTSPASETDPTYAENGRLYD 160 (406)
T ss_dssp EECCCCEEETTTEEECSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECTTEEEECCSSCTTSTTTTCEEE
T ss_pred CCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHCCCCCCCC
T ss_conf 56544567777789712127665235456844461899999999997436431365201566566522012034675356
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~~~~~giDGfR~D~~~~~~~~~~ 240 (406)
T d3bmva4 161 NGTLLGGYTNDTNGYFHHYGGTDFSSYEDGIYRNLFDLADLNQQNSTIDSYLKSAIKVWLDMGIDGIRLDAVKHMPFGWQ 240 (406)
T ss_dssp TTEEEECSTTCTTCCBCCSCBCCCSSHHHHHHSBSTTEEEBCTTSHHHHHHHHHHHHHHHHTTCCEEEESCGGGSCHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
T ss_conf 87411466545566434556764445666311245554210226689999999887777530777532245444632568
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (406)
T d3bmva4 241 KNFMDSILSYRPVFTFGEWFLGTNEIDVNNTYFANESGMSLLDFRFSQKVRQVFRDNTDTMYGLDSMIQSTASDYNFIND 320 (406)
T ss_dssp HHHHHHHHHHSCCEEEECCCCCTTCCCHHHHHHHHHSSSEEBCHHHHHHHHHHHTSCSSCHHHHHHHHHHHHHHCTTGGG
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHH
T ss_conf 99988888753212334333455100022110247776500122023788876405740267789987620013443344
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~fl~nHD~~R~~~~~~~~~~~~a~~~~lt~pG~P~IyyGdE~g~~g~~dp~~r~~~~~~~~~~~~~~~~~~Li~lRk~ 400 (406)
T d3bmva4 321 MVTFIDNHDMDRFYNGGSTRPVEQALAFTLTSRGVPAIYYGTEQYMTGNGDPYNRAMMTSFNTSTTAYNVIKKLAPLRKS 400 (406)
T ss_dssp CEECSCCSSSCCSCCSSCSHHHHHHHHHHHHSSSEEEEETTGGGTCCCCSTTGGGCCCCCCCTTSHHHHHHHHHTTHHHH
T ss_pred HCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 32566677646660688799999999999971797777657653868998824440489877896999999999999863
Q ss_pred -----E
Q ss_conf -----8
Q 002647 518 -----G 518 (897)
Q Consensus 518 -----a 518 (897)
=
T Consensus 401 ~paLry 406 (406)
T d3bmva4 401 NPAIAY 406 (406)
T ss_dssp CHHHHH
T ss_pred CHHHCC
T ss_conf 944159
|
| >d1kl1a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Serine hydroxymethyltransferase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=0 Score=30580.18 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~l~~~D~ei~~~i~~e~~rq~~~l~LiaSEN~~S~~v~~a~~S~l~nkyaeG~pg~ryy~G~~~id~iE~la~~ra~~ 80 (405)
T d1kl1a_ 1 MKYLPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQ 80 (405)
T ss_dssp CCHHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHCHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 93155549999999999999997691586067767899999856752475768899964607762299999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 lF~a~~anVqp~SGs~An~av~~all~pGD~im~l~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~l~~~a~ 160 (405)
T d1kl1a_ 81 LFGAEHANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKAR 160 (405)
T ss_dssp HHCCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECBCTTTCSBCHHHHHHHHH
T ss_pred HHCCCCCEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCHHCCCCCHHHHHHHHH
T ss_conf 83999414414676588999999844899878873035566445676223364588877732313025313999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~kPklIi~G~S~y~r~~d~~~~reIad~vga~l~~D~aH~~GLIa~g~~~~P~~~aDvvt~tThKtlrGPrgg~I~~~~ 240 (405)
T d1kl1a_ 161 LHRPKLIVAAASAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRGGMILCQE 240 (405)
T ss_dssp HHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSSTTCCCSCEEEEECH
T ss_pred HHCCCEEEECCCCCCCCCCHHHHHHHHHHHCCEEECCHHHHHHHHHHHHCCCHHHHHHHEECCCCCCCCCCCCCEEEECC
T ss_conf 62765377523146665586999998764198786035667665443126984652110323355334677773587500
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~i~~avfPg~qggp~~~~iAa~Aval~Ea~~~~fk~Ya~qvv~NAkaLa~~L~~~G~~vv~ggTd~H~vlvdl~~~ 320 (405)
T d1kl1a_ 241 QFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNEGFTLVSGGTDNHLLLVDLRPQ 320 (405)
T ss_dssp HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGG
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEECCCCCC
T ss_conf 35777776508653468415678899999998738388999999999888999998648943435887664563243446
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~g~~ae~~Le~agI~~Nkn~iP~d~~~~~~~SGiRiGT~a~TtrG~~e~dm~~ia~~I~~~l~~~~~~~~~~~ir~~V 400 (405)
T d1kl1a_ 321 QLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNVGSEQALEEARQRV 400 (405)
T ss_dssp TCCHHHHHHHHHHHTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCEEECCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 77499999999980959767869899999998872265688998589988999999999999996589679999999999
Q ss_pred ----E
Q ss_conf ----8
Q 002647 518 ----G 518 (897)
Q Consensus 518 ----a 518 (897)
-
T Consensus 401 ~~L~~ 405 (405)
T d1kl1a_ 401 AALTD 405 (405)
T ss_dssp HHHHC
T ss_pred HHHHC
T ss_conf 99639
|
| >d2nwwa1 f.49.1.1 (A:12-416) Proton glutamate symport protein {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Proton glutamate symport protein superfamily: Proton glutamate symport protein family: Proton glutamate symport protein domain: Proton glutamate symport protein species: Pyrococcus horikoshii [TaxId: 53953]
Probab=100.00 E-value=0 Score=30577.20 Aligned_cols=1 Identities=0% Similarity=-0.925 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 l~~rili~lv~Gi~~G~~~~~~~~~~~~~~~l~~~g~lFi~lL~m~v~PLIf~sii~gi~~L~~~~~gkl~~~ti~~~l~ 80 (405)
T d2nwwa1 1 VLQKILIGLILGAIVGLILGHYGYAHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLL 80 (405)
T ss_dssp CSSHHHHHHHHHHHHHHHHHTTTTHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTTCSCTTTTHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHH
T ss_conf 98899999999999999972222127899999989999999999999999999999999745501002089999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 tt~iA~~igl~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~~l~~~iP~Ni~~al~~~~~l~vi~fail~Gial~~~~~~ 160 (405)
T d2nwwa1 81 TSAFAVTLGIIMARLFNPGAGIHLAVGGQQFQPHQAPPLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMNS 160 (405)
T ss_dssp HHHHHHHHHHHHHHHSCSCCCCCCCCCCCCCCCCCCCCHHHHHGGGSCSCHHHHHHSCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999860133322000000014311001899999705587899964678630356788889999985022
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~l~~~~~~l~~v~~kii~~im~laPigvf~l~a~~~~~~g~~~l~~l~~~~~~~~~~~~l~~~~~~~i~~ 240 (405)
T d2nwwa1 161 ENEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLL 240 (405)
T ss_dssp SCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHTGGGCCTHHHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 00345667889999999999999999898887778889999998753334555567899999999999999888889999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~p~~~~~~~~~~~~~Af~T~SS~atlP~~~~~~~~~gv~~~i~~fvlPlgatin~~G~a~~~~~~~~f~a~~~g~ 320 (405)
T d2nwwa1 241 KIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTALYQGVCTFFIANALGS 320 (405)
T ss_dssp HTTTCCHHHHHHHHHHHHHHHHHHCCTGGGHHHHHHHHHTTTCCTTTHHHHTTTTSSSCCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHCCCCHHHHHHHCCCHHHEEEECCCCCCCCHHHHHHHHHCCCCCCCCCEECCCCHHEECCCCHHHHHHHHHHHHHHCCC
T ss_conf 98289848884322310421200166556617899999975999352010236302100364124899999999987197
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~l~~~~~~~~~~~~~l~s~g~~gvPg~~~v~~~~vl~~~glP~~~~~~~~~i~li~~id~l~D~~rT~~Nv~gd~~~a~i 400 (405)
T d2nwwa1 321 HLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSVGLPLTDPNVAAAYAMILGIDAILDMGRTMVNVTGDLTGTAI 400 (405)
T ss_dssp CCCSSTTHHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTCCTTSHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHE
T ss_conf 99989999999999999986178616799999999998699886410565888887498550550898828776588841
Q ss_pred ----E
Q ss_conf ----8
Q 002647 518 ----G 518 (897)
Q Consensus 518 ----a 518 (897)
-
T Consensus 401 v~k~e 405 (405)
T d2nwwa1 401 VAKTE 405 (405)
T ss_dssp HHHHC
T ss_pred EECCC
T ss_conf 33579
|
| >d1h6za3 d.142.1.5 (A:1-405) Pyruvate phosphate dikinase, N-terminal domain {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: Pyruvate phosphate dikinase, N-terminal domain domain: Pyruvate phosphate dikinase, N-terminal domain species: Trypanosoma brucei [TaxId: 5691]
Probab=100.00 E-value=0 Score=30575.20 Aligned_cols=1 Identities=0% Similarity=-1.124 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~lVGGK~AnLgel~~~GipVP~GFvITt~Ay~~Fl~~n~L~~~i~~~i~~~l~~~~~~~ 80 (405)
T d1h6za3 1 VAKKWVYYFGGGNADGNKNMKELLGGKGANLAEMVNLGIPVPPGFTITTEACKTYQETETIPQEVADQVRENVSRVEKEM 80 (405)
T ss_dssp CCCCCEEEECSSSCSCCTTCHHHHHHHHHHHHHHHHTTCCCCCEEEECHHHHTTTTTSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99747997399865578455750568899899999786999998886299999999738976889999999997664776
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 160 (405)
T d1h6za3 81 GAKFGDPANPLLFSVRSGAAASMPGMMDTVLNLGLNKVTVDAWVRRAPRLERFVYDSYRRFITMYADIVMQVGREDFEEA 160 (405)
T ss_dssp CCBTTCTTSBCCEEEEESCTTC-----CCCCSBSCCHHHHHHHGGGCGGGHHHHHHHHHHHHHHHHHHHHCCCSTTTSTT
T ss_pred HHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
T ss_conf 66523543115553023210122100455666665456689998742550566899999999763011246305678898
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~v~~S~~~~~a~~yr~~~~~~~~~~~~ 240 (405)
T d1h6za3 161 LSRMKERRGTKFDTDLTASDLKELCDGYLELFELKTGCSFPQDPVMQLFAAIKAVFRSWGNPRATIYRRMNNITGLLGTA 240 (405)
T ss_dssp THHHHHHHSCSCGGGCCHHHHHHHHHTTHHHHHHHSSSCCCCCHHHHHHHHHHHHHHTTTCTTTTTHHHHSCCCSCCCCC
T ss_pred HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHH
T ss_conf 88888751651124572888887888999866541387541054677678888987620572377778761754113331
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~v~~~~~~~~~~sgv~~t~~~~tG~~~~~~~~~~~g~~~~vv~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (405)
T d1h6za3 241 VNVQAMVFGNINDRSATGVAFSRSPSTGENFFFGEYLVNAQGEDVVAGIRTPQQINHSLSLRWAKAHGVGEEERRKRYPS 320 (405)
T ss_dssp EEEEECCCSCSSTTCEEEEEESSCSSSCCSSCEEEEEESCCTTHHHHCCSCCEESSHHHHHHHHTTSSCCHHHHHHHSCC
T ss_pred HEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCCCEEEEECCCCHHHCCCCCEECCCCCCCC
T ss_conf 11234542135665443334556777898753368646676233213765770466403310100145321104665545
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~l~~e~~~~La~l~~~iE~~fg~PqDIEWAi~dg~L~ILQaRPv~~t~~a~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 400 (405)
T d1h6za3 321 MEEAMPENYRLLCDVRKRLENHYRDMQDLEFTVQDGRLWLLQCRNGKRTIHAAVRIAIDMVNEGLISREEAVLRIDPYQV 400 (405)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHTSCEEEEEEEETTEEEEEEEEECCCCHHHHHHHHHHHHHHTSSCHHHHHHTSCGGGG
T ss_pred HHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHH
T ss_conf 55528799999999999999982998204999989989999766788668889999999997699798999872798278
Q ss_pred ----E
Q ss_conf ----8
Q 002647 518 ----G 518 (897)
Q Consensus 518 ----a 518 (897)
-
T Consensus 401 ~~~~~ 405 (405)
T d1h6za3 401 DHLMH 405 (405)
T ss_dssp GGGGC
T ss_pred HHHCC
T ss_conf 67448
|
| >d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: NifS-like protein/selenocysteine lyase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=30572.28 Aligned_cols=1 Identities=100% Similarity=1.400 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 m~d~~~vR~~FP~l~~~~~~~~~iYld~a~~~~~p~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~e~~R~~ia~~l~ 80 (405)
T d1jf9a_ 1 IFSVDKVRADFPVLSREVNGLPLAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFIN 80 (405)
T ss_dssp CCCHHHHHHTCGGGGCEETTEECEECCTTTCCCCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHCHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 98979998758211467189982997382006899999999999998666987630409999999999999999999839
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~i~~~~~~T~~~~~~~~~~~~~~~~~g~~il~~~~e~~s~~~~~~~~a~~~g~~v~~~~~~~~g~~~~~~~~~~i 160 (405)
T d1jf9a_ 81 ARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLF 160 (405)
T ss_dssp CSCGGGEEEESSHHHHHHHHHHHHHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHC
T ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHC
T ss_conf 98755430237688897788842331026789989998375331699999999973968999877998838799999753
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~t~lv~~~~v~~~tG~~~pi~~i~~~~~~~g~~~~vD~~q~~g~~~id~~~~~~D~~~~s~hK~~Gp~G~g~l~v~~~ 240 (405)
T d1jf9a_ 161 DEKTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKEA 240 (405)
T ss_dssp CTTEEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGGTTSCSSCEEEEECHH
T ss_pred CCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEECCCCEECCCCCCCHHHCCCCEEECCCCCCCCCCCCEEEEECHH
T ss_conf 69957999966777655438467766678873975641554000015653333078646613230156887510242265
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~L~~~~~~~l~~~~ 320 (405)
T d1jf9a_ 241 LLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVP 320 (405)
T ss_dssp HHTTCCCSSCSSSSEEECCTTTCCEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTST
T ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 54036863223565675344555655553224307787677899999999999981849999999999988776651388
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~~~~~~~r~~ivsf~~~~~~~~~~~~~L~~~gI~v~~G~~c~~~~~~~~~~~g~iRiS~~~ynt~eDid~l~~~l~~i 400 (405)
T d1jf9a_ 321 DLTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRI 400 (405)
T ss_dssp TEEEESCTTCCSEEEEEETTCCHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 65556876767479997389899999999987892997660321567886099988999788999999999999999999
Q ss_pred ----E
Q ss_conf ----8
Q 002647 518 ----G 518 (897)
Q Consensus 518 ----a 518 (897)
|
T Consensus 401 ~r~~~ 405 (405)
T d1jf9a_ 401 HRLLG 405 (405)
T ss_dssp HHHHC
T ss_pred HHHCC
T ss_conf 99609
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=100.00 E-value=0 Score=30568.49 Aligned_cols=1 Identities=0% Similarity=-2.454 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~~~~~~~g~~~~~~~~~~~~re~v~v~~~~dt~rDG~~d~l~~di~rP~~~~k~Pvil~~sPY~~~~~~~~~~~~~~~ 80 (405)
T d1lnsa3 1 LDNHYHFFNDKSLATFDSSLLEREVLWVESPVDSEQRGENDLIKIQIIRPKSTEKLPVVMTASPYHLGINDKANDLALHD 80 (405)
T ss_dssp CCSSCCEETTEECSCSCGGGCEEEEEEEECSCCTTCSSSCCEEEEEEEECCCSSCEEEEEEECSSTTCCCHHHHHHHCCC
T ss_pred CCCCCCCCCCCCCCEECCCCCEEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC
T ss_conf 98855433783413205887568688982888878899874799999742889974599996786787766544322345
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GYavv~~D~RG~g~S~G~~~~~~~~ 160 (405)
T d1lnsa3 81 MNVELEEKTSHEIHVEQKLPQKLSAKAKELPIVDKAPYRFTHGWTYSLNDYFLTRGFASIYVAGVGTRSSDGFQTSGDYQ 160 (405)
T ss_dssp CCCCCCCCCSEECCCCCCCCCCCCCCCCCCCEESSCSCBCCCCCCCHHHHHHHTTTCEEEEECCTTSTTSCSCCCTTSHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHH
T ss_conf 65433445543333233454222234555665555654455664445568898679879997888788999755468866
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 e~~D~~~~IeWl~~~~~~~~~~~~~~~~~q~WsnGkVGm~G~SY~G~~q~~aA~~~pp~LkAivp~~~~~d~y~~~~~~G 240 (405)
T d1lnsa3 161 QIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENG 240 (405)
T ss_dssp HHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSS
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHCCC
T ss_conf 63009999999871563333433443211454387458995289999999998608865419994476655888754178
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~w~~~s~~~~~~~I~vP~L~i~G 320 (405)
T d1lnsa3 241 LVRSPGGFPGEDLDVLAALTYSRNLDGADFLKGNAEYEKRLAEMTAALDRKSGDYNQFWHDRNYLINTDKVKADVLIVHG 320 (405)
T ss_dssp SBCCCTTCTTCCHHHHHHHHCGGGGSHHHHHHHHHHHHHHHHHHHHHHCTTTCCCCHHHHTTBGGGGGGGCCSEEEEEEE
T ss_pred CCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHCHHHHHHCCCHHHHHHHHCCCCCHHHHHHCCHHHHHHCCCCCEEEEEE
T ss_conf 40035421255666653146655555400221115565154203455541233233555536853565137988899975
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 w~D~~v~~~~~~~~y~al~~~~~~~Lilgpw~H~~~~~~~~~d~~~~~~~wFD~~LkG~~ng~~~~~~~~~~~~g~~~W~ 400 (405)
T d1lnsa3 321 LQDWNVTPEQAYNFWKALPEGHAKHAFLHRGAHIYMNSWQSIDFSETINAYFVAKLLDRDLNLNLPPVILQENSKDQVWT 400 (405)
T ss_dssp TTCCSSCTHHHHHHHHHSCTTCCEEEEEESCSSCCCTTBSSCCHHHHHHHHHHHHHTTCCCCCCCCSEEEECTTSSSCEE
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCC
T ss_conf 06889897899999999873799379995887899765555369999999999986889889898987999737999741
Q ss_pred ----E
Q ss_conf ----8
Q 002647 518 ----G 518 (897)
Q Consensus 518 ----a 518 (897)
=
T Consensus 401 ~~~~W 405 (405)
T d1lnsa3 401 MMNDF 405 (405)
T ss_dssp EESCS
T ss_pred CCCCC
T ss_conf 08989
|
| >d1qz9a_ c.67.1.3 (A:) Kynureninase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Kynureninase species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=0 Score=30497.30 Aligned_cols=1 Identities=0% Similarity=0.105 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~d~~d~l~~~R~~F~~~~~~iYLd~as~g~~p~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~e~~R~~iA 80 (404)
T d1qz9a_ 1 TTRNDCLALDAQDSLAPLRQQFALPEGVIYLDGNSLGARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLA 80 (404)
T ss_dssp CCHHHHHHHHHTCTTGGGGGGBCCCTTCEECCTTTSCCCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHH
T ss_pred CCHHHHHHHCCCCCHHHHHHCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 96699997567781899985189999989867851033789999999999998750467565552328999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~llga~~~ei~~~~~~T~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (404)
T d1qz9a_ 81 TLIGARDGEVVVTDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDSPEELPQA 160 (404)
T ss_dssp TTTTCCTTSEEECSCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESSGGGHHHH
T ss_pred HHHCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHEEEEECEECCCCCCCHHHHHH
T ss_conf 99689987579956706777777655555420357885799962543347788775422132100010354542668986
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 i~~~T~lV~i~~v~~~tG~~~pv~~i~~~~~~~~~~~~vD~~q~~g~~~~~~~~~~~d~~~~s~~K~~~~~~g~~g~~~~ 240 (404)
T d1qz9a_ 161 IDQDTAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVPVDLHQAGADYAIGCTYKYLNGGPGSQAFVWV 240 (404)
T ss_dssp CSTTEEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEEECSSSTTCCCTTCCCEEEE
T ss_pred CCCCCEEEEEECCCCCCCCEECHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECHHHCCCCCCEEEEEEE
T ss_conf 69884599984245555616238997310324443326885123321233444454509998050214668856999874
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~ 320 (404)
T d1qz9a_ 241 SPQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELV 320 (404)
T ss_dssp CTTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 36556307863223577555522234544335604554320010467888777888877668999999987678999988
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~~~~~~~~i~~p~~~~~r~~~vsf~~~~~~~v~~~L~~~gi~~~~r~~~~lRiS~~h~ynt~~did~~~~~L~~vl~~ 400 (404)
T d1qz9a_ 321 EQRCAAHELTLVTPREHAKRGSHVSFEHPEGYAVIQALIDRGVIGDYREPRIMRFGFTPLYTTFTEVWDAVQILGEILDR 400 (404)
T ss_dssp HHHHTTSCCEECSCSSGGGBCSEEEEECTTHHHHHHHHHTTTEECEEETTTEEEEECCTTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCCCEEEECCCCCCCEEEEEEEECCCHHHHHHHHHHCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 75435898799788883120139999169999999999888989862599869997997789999999999999999971
Q ss_pred ---E
Q ss_conf ---8
Q 002647 518 ---G 518 (897)
Q Consensus 518 ---a 518 (897)
+
T Consensus 401 ~~~~ 404 (404)
T d1qz9a_ 401 KTWA 404 (404)
T ss_dssp TTTC
T ss_pred CCCC
T ss_conf 7889
|
| >d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cytochrome P450-CAM species: Pseudomonas putida [TaxId: 303]
Probab=100.00 E-value=0 Score=30496.73 Aligned_cols=1 Identities=0% Similarity=-1.822 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 l~p~p~~~p~~~~~d~d~~~p~~~~~dp~~~~~~lr~~~~~~~~~~~~~~g~w~vtr~~dv~~vl~d~~~Fss~~~~~~~ 80 (404)
T d1re9a_ 1 LAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQESNVPDLVWTRCNGGHWIATRGQLIREAYEDYRHFSSECPFIPR 80 (404)
T ss_dssp CCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHGGGGSTTSCSEEEECGGGCEEEECSHHHHHHHHHCTTTEETTSCSSSH
T ss_pred CCCCCCCCCHHHCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 98877999832266789898577632818999999960899779856999989976999999997699757689987764
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~D~p~H~~~R~~l~~~Fs~~~l~~~~~~i~~~~~~ll~~~~~~g~~D~v~~~a~~l~~~vi~~llG~p 160 (404)
T d1re9a_ 81 EAGEAYDFIPTSMDPPEQRQFRALANQVVGMPVVDKLENRIQELACSLIESLRPQGQCNFTEDYAEPFPIRIFMLLAGLP 160 (404)
T ss_dssp HHHHHCCCTTTTCCTTHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHGGGSEEEHHHHTTTHHHHHHHHHHTTCC
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHC
T ss_conf 44333456654578889999997526757843189998999999999974421467346420344577888799987420
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~li~~~r~~~~~d~~~~~~~~~~~~~~~~~~e~~~~~~~l~~ag~ 240 (404)
T d1re9a_ 161 EEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQVNGRPITSDEAKRMCGLLLVGGL 240 (404)
T ss_dssp GGGHHHHHHHHHHHHSCCSSSCHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHTCEETTEECCHHHHHHHHHHHHHTTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 02102321335655431226899999999999999998887506654402333100233345758899999999998763
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 eTt~~~l~~~~~~L~~~p~~~~~l~~~~~~~~~~v~E~lR~~~p~~~~r~~~~~~~~~G~~ip~G~~V~~~~~aanrDp~ 320 (404)
T d1re9a_ 241 DTVVNFLSFSMEFLAKSPEHRQELIERPERIPAACEELLRRFSLVADGRILTSDYEFHGVQLKKGDQILLPQMLSGLDER 320 (404)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHHHHHHTCCBCCEEEESSCEEETTEEECTTCEEECCHHHHTTCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHCCCCC
T ss_conf 34678899999997550588999876410111123342234553333433223200388667640233243675367854
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~f~dPd~F~p~R~~~~hl~FG~G~h~C~G~~lA~~e~~~~l~~ll~r~p~~~l~~~~~~~~~~~~~~g~~~lpv~~~P~~ 400 (404)
T d1re9a_ 321 ENACPMHVDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQHKSGIVSGVQALPLVWDPAT 400 (404)
T ss_dssp TSSSTTSCCTTCSSCCCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCCCCEECTTCCCCEECSSBCEESCCEEECCGGG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEECCCCCCCCCEEEEEEEEECC
T ss_conf 47993331889999998877998616801999999999999999997898589999964315887258543468992068
Q ss_pred ---E
Q ss_conf ---8
Q 002647 518 ---G 518 (897)
Q Consensus 518 ---a 518 (897)
.
T Consensus 401 ~~~~ 404 (404)
T d1re9a_ 401 TKAV 404 (404)
T ss_dssp CCCC
T ss_pred CCCC
T ss_conf 6869
|
| >d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium yoelii yoelii [TaxId: 73239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Ornithine aminotransferase species: Plasmodium yoelii yoelii [TaxId: 73239]
Probab=100.00 E-value=0 Score=30495.44 Aligned_cols=1 Identities=0% Similarity=0.936 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
|
T Consensus 1 ~~~~~~~~~~~~~~~~~y~p~P~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~ 80 (404)
T d1z7da1 1 KTPEDYINNELKYGAHNYDPIPVVLKRAKGVFVYDVNDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTICSRAFFS 80 (404)
T ss_dssp CCHHHHHHHHHHHBCCCCCCEEEEEEEEEBTEEEETTCCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCSCCCTTSEE
T ss_pred CCHHHHHHHHHHCCCCCCCCCCCEEEEEECCEEEECCCCEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCH
T ss_conf 98799997787617888999885699946388997998999983306887846259699999999999857886665102
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~v~~~~sgs~a~~~a~k~ar~~~~~~~~~~~~~~~~~~~~~~~hg~~~~~~~~~~~~~~~~~~ 160 (404)
T d1z7da1 81 VPLGICERYLTNLLGYDKVLMMNTGAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNF 160 (404)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC---------------------
T ss_pred HHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 79999997444314433024410243037789999998875213443222442222245788744333456554455677
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPi~g~~G~~~~~~~fl~~l~~lc~~~g~llI~DEV~tGfgRtG~~~~ 240 (404)
T d1z7da1 161 GPFAPQFSKVPYDDLEALEEELKDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLC 240 (404)
T ss_dssp -----CEEEECTTCHHHHHHHHTSTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSG
T ss_pred CCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCC
T ss_conf 88876300236656899999706997799999778388897409999999999999881978999767547774434345
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~e~~gv~PDivt~gK~l~gG~~p~~~v~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~~~~~~~~~~~~~~~~ 320 (404)
T d1z7da1 241 VHHYNVKPDVILLGKALSGGHYPISAVLANDDIMLVIKPGEHGSTYGGNPLAASICVEALNVLINEKLCENAEKLGGPFL 320 (404)
T ss_dssp GGGGTCCCSEEEECGGGGTTSSCCEEEEECHHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCHHHHH
T ss_conf 00059887778872311289887554456399871478998576889895013555544344300003443001015789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~~~~~l~~~Gl~~~~~~~~~ir~~Ppl~it~~~id~~~~~l~~al 400 (404)
T d1z7da1 321 ENLKRELKDSKIVRDVRGKGLLCAIEFKNELVNVLDICLKLKENGLITRDVHDKTIRLTPPLCITKEQLDECTEIIVKTV 400 (404)
T ss_dssp HHHHHHHTTCTTEEEEEEETTEEEEEECTTTCCHHHHHHHHHHTTEECCEETTTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEEEECCEEEEEECCCCCCHHHHHHHHHHCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 99999975699727887527199999748865599999999969938943899989997986789999999999999999
Q ss_pred ---E
Q ss_conf ---8
Q 002647 518 ---G 518 (897)
Q Consensus 518 ---a 518 (897)
-
T Consensus 401 k~~~ 404 (404)
T d1z7da1 401 KFFD 404 (404)
T ss_dssp HHHC
T ss_pred HHHC
T ss_conf 9629
|
| >d1h12a_ a.102.1.2 (A:) Endo-1,4-beta-xylanase {Pseudoalteromonas haloplanktis [TaxId: 228]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: Cellulases catalytic domain domain: Endo-1,4-beta-xylanase species: Pseudoalteromonas haloplanktis [TaxId: 228]
Probab=100.00 E-value=0 Score=30490.65 Aligned_cols=1 Identities=0% Similarity=-1.922 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~~a~~~~~y~n~~~~~~~~~i~~k~~~~~~~~f~~~~~~~~y~~~~~~~~~~~~~~~~i~d~~~~dv~SEGq 80 (404)
T d1h12a_ 1 AFNNNPSSVGAYSSGTYRNLAQEMGKTNIQQKVNSTFDNMFGYNNTQQLYYPYTENGVYKAHYIKAINPDEGDDIRTEGQ 80 (404)
T ss_dssp CCCSSCCSSCHHHHCCCCCHHHHTTCCSHHHHHHHHHHHHSSSCSSSCCEEEEEETTEEEEEEEEECCTTTCCEEEHHHH
T ss_pred CCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 98888787761333755478898619999999999999971789884489971687665200012255479986654378
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 gYGMl~Av~~ndr~~FD~Lw~Wt~~~l~~~d~~~~~~~~gL~aW~~~~~~~~~~~v~d~nsAtDGDl~iA~ALl~A~~~W 160 (404)
T d1h12a_ 81 SWGMTAAVMLNKQEEFDNLWRFAKAYQKNPDNHPDAKKQGVYAWKLKLNQNGFVYKVDEGPAPDGEEYFAFALLNASARW 160 (404)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHTBCCTTCSSGGGTTCBEEEEEECTTSCEEEEEEEECHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 89999999809999999999999998604555444455677613345888987556889999768999999999999861
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 g~~~~~~Y~~eA~~il~~i~~~~~~~~~~~l~P~~~~f~nPSY~~P~~~~~fa~~~~~~~~~~~W~~v~~~s~~ll~~~~ 240 (404)
T d1h12a_ 161 GNSGEFNYYNDAITMLNTIKNKLMENQIIRFSPYIDNLTDPSYHIPAFYDYFANNVTNQADKNYWRQVATKSRTLLKNHF 240 (404)
T ss_dssp CSSSSCCHHHHHHHHHHHHHHHSEETTEECSCTTCSSCBCGGGCCHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 89407799999999999888740578852556875578686325489999999860577540889999999999999850
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~s~~p~~gL~~d~~~~dg~~~~~~~~~~~~~~~~~~~yDA~Rvpl~~a~dy~w~~~d~~~~~~~~~~~~f~~~~~~~~ 320 (404)
T d1h12a_ 241 TKVSGSPHWNLPTFLSRLDGSPVIGYIFNGQANPGQWYEFDAWRVIMNVGLDAHLMGAQAWHKSAVNKALGFLSYAKTNN 320 (404)
T ss_dssp HHHSSTTTTTCCCSCBCTTSCBCCSCCSTTCCSCTTEECTTTHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 13467887789957872489736676667676778865502888778998887505888455799999999999875026
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~~~~~~~~~~G~~~~~~~~~g~~a~~a~a~~a~~~~~~a~~~~~~~~~~~~~~~~~~YY~~~L~L~~ll~lsG~~r~~ 400 (404)
T d1h12a_ 321 SKNCYEQVYSYGGAQNRGCAGEGQKAANAVALLASTNAGQANEFFNEFWSLSQPTGDYRYYNGSLYMLAMLHVSGNFKFY 400 (404)
T ss_dssp TTSSCBSCEETTEECSSCBCCHHHHHHHHHHGGGCCCHHHHHHHHHHHHTCCCCCSTTHHHHHHHHHHHHHHTTTCCCCC
T ss_pred CCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
T ss_conf 88877631316896478888889999999999864793789999999970357888888789999999999963984772
Q ss_pred ---E
Q ss_conf ---8
Q 002647 518 ---G 518 (897)
Q Consensus 518 ---a 518 (897)
-
T Consensus 401 ~~~~ 404 (404)
T d1h12a_ 401 NNTF 404 (404)
T ss_dssp CCC-
T ss_pred CCCC
T ss_conf 4579
|
| >d2b5dx2 c.6.2.4 (X:1-404) Alpha-amylase AmyC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: 7-stranded beta/alpha barrel superfamily: Glycoside hydrolase/deacetylase family: AmyC N-terminal domain-like domain: Alpha-amylase AmyC species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=30494.36 Aligned_cols=1 Identities=0% Similarity=-0.393 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~k~~l~lvlH~HqP~~~~~~~~~~~ee~W~~~~~~~~Y~pll~~l~~~~~~r~t~n~sP~LleQL~D~~~~~~f~~~~~~ 80 (404)
T d2b5dx2 1 MRGKILIFLHAHLPYVHHPEYDHFLEERWLFEAITETYIPLLMMFDEIEDFRLTMSITPPLMEMLSSRDLQEKYERHMEK 80 (404)
T ss_dssp CCEEEEEEEEECCCCCCCTTCSSCTTHHHHHHHHHHTHHHHHHHHHHSSCCCEEEEECHHHHHHHHCHHHHHHHHHHHHH
T ss_pred CCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHCHHHHHHHHHHHHH
T ss_conf 93489999945888644899886443669999999988999999985868619998779999987586756446999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~r~L~~~G~vEll~~~y~Hpilpll~~~~e~~~ 160 (404)
T d2b5dx2 81 LIELANKEVERTKKEHPLKHKMAKFYREHFEKILNVFRSYDGNILEGFKKYQETGKLEIVTCNATHAFLPLYQMYPEVVN 160 (404)
T ss_dssp HHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHHHHHTTTCTHHHHHHHHHHTSEEEEEECTTCBCGGGGTTCHHHHH
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHCCCCHHHHH
T ss_conf 99986666552234204788999999999999999999966478999999997698048723520123455049869999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~Qi~~g~~~~~~~fG~~P~G~W~pE~a~~~~l~~~l~~~Gi~~~~~d~~~l~~~~~~~~~~~~~p~~~~~~~~~~~rd~~ 240 (404)
T d2b5dx2 161 AQITVGVKNYEKHMKKHPRGIWLAECGYYQGLDLYLAQNNVEYFFVDSHAFWFADEQPRYGVYRPIMTPSGVFAFARDPE 240 (404)
T ss_dssp HHHHHHHHHHHHHHSSCCSEEECGGGCBCTTHHHHHHHTTCCEEEECTHHHHTSSSCCTTGGGSCEECTTSCEEEECCGG
T ss_pred HHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHCCCCEEEECCHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCC
T ss_conf 99999999999986999988978753558769999997798699968335523577887666576215886157742510
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~vws~~~G~pg~~~~~~~~~~~~~~~~~~~i~~~frd~~ls~~igf~y~~~~~~~~~~~~k~~Yd~~~A~~~a~~~a 320 (404)
T d2b5dx2 241 SSEQVWSAAVGYPGDPRYREFYRDIGFDREMEYIKDYIDPSGVRINTGIKYHRITSKSLDASQKEYYDIDLAMEAVEEHA 320 (404)
T ss_dssp GCGGGGCTTTSGGGCTTSBCTTCCHHHHSCHHHHGGGSCTTSCCCCCSCCCBBCCSSCSCGGGCCBCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 01235414568878842121024533467776135764477632011402303566446643234479899999999989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~f~~~~~~~~~~~~~~~~~~~vv~i~~DgE~fGh~w~eG~~fL~~l~~~l~~~~~i~~~T~se~l~~~~~~~~~~l~~g 400 (404)
T d2b5dx2 321 RDFLHKKESQARRLMDIMGVEPVIVAPFDAELFGHWWFEGVFFLKRFFELVNESKDLKLVTASEVIDTLEEVQIATPADS 400 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCCEEEEEEEGGGBTTTBTTHHHHHHHHHHHHHHCSSEEECCHHHHHHHCCCCCBCCCCSB
T ss_pred HHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHCCCCCHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHCCCCCCCCCCCC
T ss_conf 99999999999876523689987999755132066713379999999999863898389769999986899772230799
Q ss_pred ---E
Q ss_conf ---8
Q 002647 518 ---G 518 (897)
Q Consensus 518 ---a 518 (897)
.
T Consensus 401 SWg~ 404 (404)
T d2b5dx2 401 SWGA 404 (404)
T ss_dssp CSCC
T ss_pred CCCC
T ss_conf 9998
|
| >d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Ornithine aminotransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=30493.40 Aligned_cols=1 Identities=0% Similarity=-2.055 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~P~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Av~~q~~~~~~~~~~~ 80 (404)
T d2byla1 1 GPPTSDDIFEREYKYGAHNAHPLPVALERGKGIYLWDVEGRKYFDFLSSISAVNQGHCHPKIVNALKSQVDKLTLTSRAF 80 (404)
T ss_dssp CCCCHHHHHHHHHHHBCSCCCCEEEEEEEEEBTEEEETTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCCCCCTTE
T ss_pred CCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEECCCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCC
T ss_conf 98967999999877546788987844898454999979879999926889988553798999999999996478755643
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~~~~~~~~~~~~~~i~~~~~~~hg~t~~~~~~~~~~~~~~ 160 (404)
T d2byla1 81 YNNVLGEYEEYITKLFNYHKVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYD 160 (404)
T ss_dssp EESSHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCCSHHHHTTCCCHHHHT
T ss_pred CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCC
T ss_conf 31049999876543011332220147666403589999987640366312311223357884556510340577865455
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~p~~~~~~~~p~~d~~~l~~~l~~~~iAaviiEPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~ 240 (404)
T d2byla1 161 GFGPFMPGFDIIPYNDLPALERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRW 240 (404)
T ss_dssp TSCSCCTTEEEECTTCHHHHHHHHTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS
T ss_pred CCCCCCCCEEEECCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCC
T ss_conf 77888887157346679999985579986999978843888971499999999999998628079960465364635533
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~a~~~~gv~PDi~~~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~g~~ 320 (404)
T d2byla1 241 LAVDYENVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKPGEHFSTYGGNPLGCRVAIAALEVLEEENLAENADKLGII 320 (404)
T ss_dssp SGGGGGTCCCSEEEECGGGGTTSSCCEEEEECHHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred CHHHHCCCCCCEEEECCHHHCCCCCCEEEEECHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 33654699988999774646898662104521023312578887859886999999999999999854703566676688
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 l~~~l~~l~~~~i~~vRg~Gl~~~i~~~~~~~~~~~~~~~~l~~~Gvl~~~~~~~~i~l~PpL~it~~~id~~~~~l~~a 400 (404)
T d2byla1 321 LRNELMKLPSDVVTAVRGKGLLNAIVIKETKDWDAWKVCLRLRDNGLLAKPTHGDIIRFAPPLVIKEDELRESIEIINKT 400 (404)
T ss_dssp HHHHHHTSCTTTEEEEEEETTEEEEEECCCSSCCHHHHHHHHHHTTEECEEEETTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCEEEEECCCEEEEEEECCCCHHHHHHHHHHHHCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 99999960136631356246289999826886129999999996991992489998999799678999999999999999
Q ss_pred ---E
Q ss_conf ---8
Q 002647 518 ---G 518 (897)
Q Consensus 518 ---a 518 (897)
=
T Consensus 401 l~~f 404 (404)
T d2byla1 401 ILSF 404 (404)
T ss_dssp HHTC
T ss_pred HHCC
T ss_conf 9729
|
| >d1uyra2 c.14.1.4 (A:1815-2218) Acetyl-coenzyme A carboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Biotin dependent carboxylase carboxyltransferase domain domain: Acetyl-coenzyme A carboxylase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=30496.52 Aligned_cols=1 Identities=0% Similarity=-0.260 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~P~Pi~~~~Dp~dR~v~~~P~~~~pyD~R~~i~g~~~~~~~~~~i~D~~sF~E~~~~~a~svVtG~ARL~G~PVGVIAn 80 (404)
T d1uyra2 1 NMPVPILETKDTWDRPVDFTPTNDETYDVRWMIEGRETESGFEYGLFDKGSFFETLSGWAKGVVVGRARLGGIPLGVIGV 80 (404)
T ss_dssp TSCCCCCCCSSCSSSCCCCCCCSSSCCCHHHHHHCEEETTEEECCSSCTTCCEEESTTSCTTEEEEEEEETTEEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEHHHCCCCCEEEEEEEECCEEEEEEEE
T ss_conf 98989789999800135657899999777999846755555445010287025520046786699999999999999986
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 e~~~~~g~i~aDpa~~~s~~~~~~~~Ggv~~p~sA~K~A~~i~d~cd~~~lPLi~l~D~pGF~~G~~~E~~gilr~GA~i 160 (404)
T d1uyra2 81 ETRTVENLIPADPANPNSAETLIQEPGQVWHPNSAFKTAQAINDFNNGEQLPMMILANWRGFSGGQRDMFNEVLKYGSFI 160 (404)
T ss_dssp CCSCEEEEECCCTTCSSCCCEEEEECTTCBCHHHHHHHHHHHHHHHTTSCCCEEECCCCCCBCC------CTHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 76102687568755653055565404786685579999999998652346645886137766676899987899999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 v~A~~~~~vP~i~vI~~~g~~~GGa~vv~~~~~~~~~~~~yAwP~a~~gVm~pEGav~I~fr~e~~~~~~~r~d~~~~el 240 (404)
T d1uyra2 161 VDALVDYKQPIIIYIPPTGELRGGSWVVVDPTINADQMEMYADVNARAGVLEPQGMVGIKFRREKLLDTMNRLDDKYREL 240 (404)
T ss_dssp HHHHHTCCSCEEEEECTTCEEEHHHHHTTCGGGGTTTEEEEEETTCEEESSCHHHHHHHHSCHHHHHHHHHHC-------
T ss_pred HHHHHHCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHEECCHHHHCCHHHHHHHHHHH
T ss_conf 99998548997999957864130234103676677655488878654106786654321033021113265568999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~l~~~~~a~e~~~~l~~~i~~re~~l~p~y~qvA~~Fadlhdt~~Rm~~kG~I~~iv~w~~tR~~~~~~lrr~l~e~~ 320 (404)
T d1uyra2 241 RSQLSNKSLAPEVHQQISKQLADRERELLPIYGQISLQFADLHDRSSRMVAKGVISKELEWTEARRFFFWRLRRRLNEEY 320 (404)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTTSSHHHHHHHTCSSEEECHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 98725755587789999999999999862789999999998508687898568466122878859999999999874999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (404)
T d1uyra2 321 LIKRLSHQVGEASRLEKIARIRSWYPASVDHEDDRQVATWIEENYKTLDDKLKGLKLESFAQDLAKKIRSDHDNAIDGLS 400 (404)
T ss_dssp HHHTTTTCCSSCCHHHHHHHHHTTSCTTSCTTCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHH
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 99999985777787999999999987346865639999999847799999999998999999999997539088999999
Q ss_pred ---E
Q ss_conf ---8
Q 002647 518 ---G 518 (897)
Q Consensus 518 ---a 518 (897)
-
T Consensus 401 ~~~~ 404 (404)
T d1uyra2 401 EVIK 404 (404)
T ss_dssp TCCC
T ss_pred HHHC
T ss_conf 9849
|
| >d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cyp154c1 monooxygenase species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=0 Score=30414.77 Aligned_cols=1 Identities=0% Similarity=-0.660 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~lR~~GPv~~~~~~g~~~~~vvt~~~~v~~vl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (403)
T d1gwia_ 1 ARIPLDPFVTDLDGESARLRAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPRLVKDINVWGAWRRGEIPADWPLIGLAN 80 (403)
T ss_dssp CCEECCTTCSCHHHHHHHHHHTCSEEEEEETTTEEEEEECSHHHHHHHHTCTTEECCGGGCHHHHTTCSCTTCTTHHHHS
T ss_pred CCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98888987669559999998149978988479960999679999999966976133765333222466765443200003
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~g~~ll~~dG~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~d~~~~~a~~~~~~~~~~~~g~~~~~~ 160 (403)
T d1gwia_ 81 PGRSMLTVDGAEHRRLRTLVAQALTVRRVEHMRGRITELTDRLLDELPADGGVVDLKAAFAYPLPMYVVADLMGIEEARL 160 (403)
T ss_dssp CCSSGGGCCHHHHHHHHHHHTTTSCHHHHHTTHHHHHHHHHHHHHTSCCSCCCEEHHHHTTTHHHHHHHHHHHTCCGGGH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCH
T ss_conf 68862158857899999997640443313222447989899875321035844431034433333233221047641000
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ag~~tt 240 (403)
T d1gwia_ 161 PRLKVLFEKFFSTQTPPEEVVATLTELASIMTDTVAAKRAAPGDDLTSALIQASENGDHLTDAEIVSTLQLMVAAGHETT 240 (403)
T ss_dssp HHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCCBTTBCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCH
T ss_conf 00022233222222048999999999987689999987427642222111112123320123358999999987064210
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~l~~~~~~l~~~p~~~~~l~~~~~~l~~~i~E~lRl~pp~~~~~~r~~~~d~~~~g~~ip~G~~V~~~~~~~~rd~~~ 320 (403)
T d1gwia_ 241 ISLIVNAVVNLSTHPEQRALVLSGEAEWSAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERA 320 (403)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHTTSSCHHHHHHHHHHHSCSBCCEEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHCCCCCCCCCCCCCCCEEECCEEECCCCEEEEECCCCCCCHHH
T ss_conf 11445555433421589999997620100001220221275200024344687670435654632353100245677654
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~pdP~~F~PeR~~~~~~lpFG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~p~~~~~~~~~~~~~~~~~lpv~~~ 400 (403)
T d1gwia_ 321 HGPTADRFDLTRTSGNRHISFGHGPHVCPGAALSRMEAGVALPALYARFPHLDLAVPAAELRNKPVVTQNDLFELPVRLA 400 (403)
T ss_dssp HCGGGGSCCTTCCCSSCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCSCTTBCCBSCCEEESS
T ss_pred CCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEECCCCCCCCCCCEEEEEE
T ss_conf 09955434878899998376688872680199999999999999999679788888834464688655579876479995
Q ss_pred --E
Q ss_conf --8
Q 002647 518 --G 518 (897)
Q Consensus 518 --a 518 (897)
-
T Consensus 401 ~~~ 403 (403)
T d1gwia_ 401 HHH 403 (403)
T ss_dssp CC-
T ss_pred CCC
T ss_conf 079
|
| >d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Multiple substrate aminotransferase, MSAT species: Thermococcus profundus [TaxId: 49899]
Probab=100.00 E-value=0 Score=30418.69 Aligned_cols=1 Identities=0% Similarity=-1.888 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~~~s~ire~~~~~~~~~~i~l~~G~P~~~~~P~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~ai 80 (403)
T d1wsta1 1 INFDSFFSEKAMLMKASEVRELLKLVETSDVISLAGGLPAPETFPVETIKKIAVEVLEEHADKALQYGTTKGFTPLRLAL 80 (403)
T ss_dssp CCGGGGCCHHHHHCCCHHHHHHHHHHTSSSCEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCCSSCCHHHHHHH
T ss_pred CCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
T ss_conf 98789999998508981899999972899958899978895206989999999999974760014889986779999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 a~~l~~~~g~~~~~~~I~it~G~~~al~~~~~~l~~~gd~v~~~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~ 160 (403)
T d1wsta1 81 ARWMEKRYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTYLAAIQAFKYYDPEFISIPLDDKGMRVDLLEEK 160 (403)
T ss_dssp HHHHHHHHCCCCTTCEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETTEECHHHHHHH
T ss_pred HHHHHHHHCCCCCHHHEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCC
T ss_conf 99999984899876773642221178899999986268755567886303567776404540267523667743112122
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~p~NPtG~~~s~~~l~~i~~~a~~~~~~li~De~y~~l~~~~~~~~~~~~~~~~~~~i~~~S 240 (403)
T d1wsta1 161 LEELRKQGKRVKIVYTVSTFQNPAGVTMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGT 240 (403)
T ss_dssp HHHHHHTTCCCCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGGCSSSCEEEEEE
T ss_pred CHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCHHHEECCCCCCCCCCCCCCCCCEEEECC
T ss_conf 00011101343212322466898786399999999998887449265345021212347887874345677770799845
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~SK~~~~G~RiG~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~ 320 (403)
T d1wsta1 241 FSKILAPGFRIGWVAAHPHLIRKMEIAKQSIDLCTNTFGQAIAWKYVENGYLDEHIPKIIEFYKPRRDAMLEALEEYMPE 320 (403)
T ss_dssp STTTTCGGGCCEEEEECHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred CCCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 55133685663444456578899999876402345530145677654114430467889999888999999999864668
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~~~~p~gg~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRi~~~~~~~~~l~~al~rl~~~l~~~~ 400 (403)
T d1wsta1 321 GVEWTKPEGGMFVRVTLPEGIDTKLMMERAVAKGVAYVPGEAFFVHRDKKNTMRLNFTYVPEETIREGVRRLAETIKEEM 400 (403)
T ss_dssp TCEECCCSBSSEEEEECCTTCCTTTTHHHHHHTTEECEEGGGGSTTCCCCSEEEEECSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEECCCCEEEEEEECCCCCCHHHHHHHHHHCCEEEEECHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 73780788146999989999999999999997897999336636899989979999567999999999999999999998
Q ss_pred --E
Q ss_conf --8
Q 002647 518 --G 518 (897)
Q Consensus 518 --a 518 (897)
.
T Consensus 401 k~~ 403 (403)
T d1wsta1 401 KRV 403 (403)
T ss_dssp HHC
T ss_pred HCC
T ss_conf 449
|
| >d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: p450 monoxygenase OxyC species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=0 Score=30416.25 Aligned_cols=1 Identities=0% Similarity=-1.424 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~~~p~~~~~~~~~dP~~~~~~lR~~gPv~ri~~~~~~~~g~~~~w~vt~~~~vr~vl~d~~~fss~~~~~~~ 80 (403)
T d1ueda_ 1 DIDQVAPLLREPANFQLRTNCDPHEDNFGLRAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHEHFTTRPQFTQS 80 (403)
T ss_dssp CCCSCCCEEECCTTTTCEETTEECHHHHHHHTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCSSEECCCCC---
T ss_pred CHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 93234767688344023117997699999995399798516776435888489979999999997598646488665644
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~l~~~Dg~~h~~~Rr~l~~~Fs~~~l~~~~~~i~~~~~~ll~~l~~~g~~~Dl~~~~~~~~~~~~~~~ 160 (403)
T d1ueda_ 81 KSGAHVEAQFVGQISTYDPPEHTRLRKMLTPEFTVRRIRRMEPAIQSLIDDRLDLLEAEGPSADLQGLFADPVGAHALCE 160 (403)
T ss_dssp ------CGGGTTCGGGCCTTHHHHHHHHHGGGSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEHHHHTHHHHHHHHHHH
T ss_pred CCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 55442202216764157815799999998686597999876179999999999874124875203566654456666677
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~rr~~~~~~~~~~~~~~~~~~ls~~~l~~~~~~~l 240 (403)
T d1ueda_ 161 LLGIPRDDQREFVRRIRRNADLSRGLKARAADSAAFNRYLDNLLARQRADPDDGLLGMIVRDHGDNVTDEELKGLCTALI 240 (403)
T ss_dssp HHTCCHHHHHHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHGGGSCHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHH
T ss_conf 73260333456655554302301567888877777899999999999862133115555422366466888877788887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~aG~dTt~~~l~~~l~~L~~~p~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~R~~~~d~~~~G~~ip~G~~V~~~~~~ 320 (403)
T d1ueda_ 241 LGGVETVAGMIGFGVLALLDNPGQIELLFESPEKAERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILM 320 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSGGGTTHHHHCHHHHHHHHHHHHHHHCSSCSCSCEEESSCEEETTEEECTTCEEEECHHH
T ss_pred HCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEECCHHC
T ss_conf 40104678999999999862320101122202442212333202223344322010134645589743333210001000
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~rdp~~f~dP~~F~PeR~~~~~lpFG~G~r~CiG~~lA~~el~~~l~~Ll~~f~~~~l~~~~~~~~~~~~~~~~~~~lp 400 (403)
T d1ueda_ 321 ANRDEALTPDPDVLDANRAAVSDVGFGHGIHYCVGAALARSMLRMAYQTLWRRFPGLRLAVPIEEVKYRSAFVDCPDQVP 400 (403)
T ss_dssp HTTCTTTSSSTTSCCTTSCCCCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCSSSCCBSCCE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEECCCCEECCEEEE
T ss_conf 25783227994243889999999979998846918999999999999999996797788988776544477510764656
Q ss_pred --E
Q ss_conf --8
Q 002647 518 --G 518 (897)
Q Consensus 518 --a 518 (897)
=
T Consensus 401 v~f 403 (403)
T d1ueda_ 401 VTW 403 (403)
T ss_dssp EEC
T ss_pred EEC
T ss_conf 569
|
| >d1xksa_ b.69.14.1 (A:) Nuclear pore complex protein Nup133 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nucleoporin domain family: Nucleoporin domain domain: Nuclear pore complex protein Nup133 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=30415.82 Aligned_cols=1 Identities=0% Similarity=-0.127 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~~~~ve~~g~~LPv~V~EaLt~a~~~~~~s~~~s~~G~awvv~g~~l~VW~y~~s~~~~~~~C~~L~LP~sdl~~~a~ 80 (403)
T d1xksa_ 1 ESVNYDVKTFGSSLPVKVMEALTLAEVDDQLTINIDEGGWACLVCKEKLIIWKIALSPITKLSVCKELQLPPSDFHWSAD 80 (403)
T ss_dssp CCSSEEEEECSSCCCHHHHHHHHHCCTTSCEEEEECTTSEEEEEETTEEEEEECCSSCCGGGCCEEEEECCCCSSCCCGG
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCC
T ss_conf 97542676778987688998862057887447999899679999799999971578887787521797189645455676
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 Lv~v~~~~~~~~~~~~~~~gvi~vs~tG~VryW~sI~~~~s~~e~~i~l~~~E~~~~l~~~e~~g~ilatstg~l~l~~~ 160 (403)
T d1xksa_ 81 LVALSYSSPSGEAHSTQAVAVMVATREGSIRYWPSLAGEDTYTEAFVDSGGDKTYSFLTAVQGGSFILSSSGSQLIRLIP 160 (403)
T ss_dssp GEEEEECC-------CTTEEEEEECTTCEEEEESCTTCTTCCEEEECC----CCEEEEEEETTTEEEEEETTCCEEEEEE
T ss_pred EEEECCCCCCCCCCCCCCCEEEEECCCCEEEECHHCCCCCCCCEEEECCCCCEEEEEEEECCCCCEEEEECCEEEEEEEC
T ss_conf 56761367767667887657999979921898710255766423431368966899888507842999947514999923
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~l~~~~L~~~~g~l~Gi~~~~sSl~~~~~~~~~~~~~s~~~~~~~~~v~~ls~~~lq~W~l~~~~e~~~~~~di~~ 240 (403)
T d1xksa_ 161 ESSGKIHQHILPQGQGMLSGIGRKVSSLFGILSPSSDLTLSSVLWDRERSSFYSLTSSNISKWELDDSSEKHAYSWDINR 240 (403)
T ss_dssp CTTSCEEEEECTTCCCC------------------CCCCEEEEEEETTTTEEEEEESSEEEEEEECSSCEEEEEEEEHHH
T ss_pred CCCCCEEEEEECCCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEEHHHHH
T ss_conf 78982899993588754555334542002124775434211133455314999977995478980389861567513789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~i~e~~~~~i~~~~~~~~~~~~~i~~~~LD~~~~~~g~~iL~~~~~~~~~~~~~yy~L~ti~~~~~~~~~~~~~~l~~~~ 320 (403)
T d1xksa_ 241 ALKENITDAIWGSESNYEAIKEGVNIRYLDLKQNCDGLVILAAAWHSADNPCLIYYSLITIEDNGCQMSDAVTVEVTQYN 320 (403)
T ss_dssp HHHHHHHHHHHTTSTTHHHHHTTCEEEEEEEEEETTEEEEEEEEECTTSSSCBEEEEEEEECCBTTBCCSCEEEEECSCC
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCEEEEEEEEEECCCCCEEEEEEEEEEEEC
T ss_conf 99999998752023556565444305998875848976999999732668870799999998278713788999867767
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~~~~~~~~~rl~vp~p~~~~ayv~~~~~V~~~~~~~~~~~~~~d~I~F~~~~d~il~~~~~~~~pl~fs~~~Glv~it 400 (403)
T d1xksa_ 321 PPFQSEDLILCQLTVPNFSNQTAYLYNESAVYVCSTGTGKFSLPQEKIVFNAQGDSVLGAGACGGVPIIFSRNSGLVSIT 400 (403)
T ss_dssp CBCCCGGGCCCEEECCCSSSSEEEEECSSEEEEEECTTCTTCCCCEEEECCGGGCCEEEEEEETTEEEEEETTTEEEEEE
T ss_pred CCCCCCCCCCCEEEECCCCCCEEEEEECCEEEEEECCCCCCCCCCCEEEEECCCCEEEEEEEECCEEEEEEECCEEEEEE
T ss_conf 85674434760599658998389999099899995789989984417888454677885121578769999234189995
Q ss_pred --E
Q ss_conf --8
Q 002647 518 --G 518 (897)
Q Consensus 518 --a 518 (897)
-
T Consensus 401 ~~~ 403 (403)
T d1xksa_ 401 SRE 403 (403)
T ss_dssp ECC
T ss_pred CCC
T ss_conf 799
|
| >d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Animal alpha-amylase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=0 Score=30417.16 Aligned_cols=1 Identities=100% Similarity=2.331 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~p~~~~g~~~i~~~f~w~~~~i~~e~~~yL~~lG~taIwl~P~~e~~~~~~~~~~~y~gY~~~dY~v~~~~Gt~~dfk 80 (403)
T d1hx0a2 1 EYAPQTQSGRTSIVHLFEWRWVDIALECERYLGPKGFGGVQVSPPNENIVVTNPSRPWWERYQPVSYKLCTRSGNENEFR 80 (403)
T ss_dssp CCSCCCCTTCCEEEEETTCCHHHHHHHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCSCSCBTTBCHHHHH
T ss_pred CCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHH
T ss_conf 98998889972589700076899999999999981998799496815766788999876003687771489999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~Lv~~aH~~GI~VIlDvV~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (403)
T d1hx0a2 81 DMVTRCNNVGVRIYVDAVINHMCGSGAAAGTGTTCGSYCNPGNREFPAVPYSAWDFNDGKCKTASGGIESYNDPYQVRDC 160 (403)
T ss_dssp HHHHHHHHTTCEEEEEECCSEEEETTCCCBSCBSSCCCBBGGGTBBTTTTBCGGGBCTTTCCSTTSBCCCTTCHHHHHHS
T ss_pred HHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
T ss_conf 99999986699799997124466655321345666764543334577788887667887656788874655771002331
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~l~~~pDLn~~np~Vr~~~~~~l~~~~~~GvdGfR~Da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~ 240 (403)
T d1hx0a2 161 QLVGLLDLALEKDYVRSMIADYLNKLIDIGVAGFRIDASKHMWPGDIKAVLDKLHNLNTNWFPAGSRPFIFQEVIDLGGE 240 (403)
T ss_dssp BGGGEEEBCTTSHHHHHHHHHHHHHHHHHTCCEEEETTGGGSCHHHHHHHHTTCCCCCTTTSCTTCCCEEEECCCCCSSS
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCC
T ss_conf 23445864679999999999999999873977653232321678899999999875073200156775278877516830
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Fl~NHD~~R~~~~~~~~~~~~~~~~~ 320 (403)
T d1hx0a2 241 AIKSSEYFGNGRVTEFKYGAKLGTVVRKWSGEKMSYLKNWGEGWGFMPSDRALVFVDNHDNQRGHGAGGSSILTFWDARL 320 (403)
T ss_dssp SSCGGGGTTTSEEECHHHHHHHHHHHTTCTTCCGGGGGGTTGGGTCCCGGGEEECSCCTTGGGTCSSCGGGCCCGGGHHH
T ss_pred HHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 21022025887102243223245787641620478998750111368845057863467775556678864144456789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~a~af~lt~p~G~P~iy~gy~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~r~~~i~~m~~frn~ 400 (403)
T d1hx0a2 321 YKIAVGFMLAHPYGFTRVMSSYRWARNFVNGEDVNDWIGPPNNNGVIKEVTINADTTCGNDWVCEHRWREIRNMVWFRNV 400 (403)
T ss_dssp HHHHHHHHHHSCSSEEEEEECBCCCCCEETTEETTTTCCSSEETTEECCCCBCTTSCBCTTBCCGGGSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999987898164676306644544577667778999888874688747767778518777668999999998663
Q ss_pred --E
Q ss_conf --8
Q 002647 518 --G 518 (897)
Q Consensus 518 --a 518 (897)
|
T Consensus 401 ~~g 403 (403)
T d1hx0a2 401 VDG 403 (403)
T ss_dssp TTT
T ss_pred CCC
T ss_conf 679
|
| >d3b55a1 c.150.1.3 (A:40-442) Succinoglycan biosynthesis protein BC3120 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: EreA/ChaN-like superfamily: EreA/ChaN-like family: EreA-like domain: Succinoglycan biosynthesis protein BC3120 species: Bacillus cereus [TaxId: 1396]
Probab=100.00 E-value=0 Score=30418.28 Aligned_cols=1 Identities=0% Similarity=-0.360 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~wi~~~a~pL~~~~p~~~~~Dl~~L~~~v~dariV~LGEatHGt~Ef~~~r~~l~r~Lvee~Gf~~va~E~d~~~~ 80 (403)
T d3b55a1 1 NQIAKWLEAHAKPLKTTNPTASLNDLKPLKNMVGSASIVGLGEATHGAHEVFTMKHRIVKYLVSEKGFTNLVLEEGWDRA 80 (403)
T ss_dssp HHHHHHHHHHCEEECCCCTTSCSGGGTTHHHHHTTCSEEEEEESCTTBHHHHHHHHHHHHHHHHHSCCCEEEEEEEHHHH
T ss_pred CHHHHHHHHHCEECCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHH
T ss_conf 95899999846718888999984779999987479739997267656079999999999999997699889994795889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~vn~yV~~g~g~~~~~~~~~w~~~e~~~li~WmR~yN~~~~~~~~v~f~G~D~~~~~~s~~~~v~~yl~~~~p~~~~~~ 160 (403)
T d3b55a1 81 LELDRYVLTGKGNPSQHLTPVFKTKEMLDLLDWIRQYNANPKHKSKVRVIGMDIQSVNENVYNNIIEYIKANNSKLLPRV 160 (403)
T ss_dssp HHHHHHHHHSCSCGGGTSCGGGCBHHHHHHHHHHHHHHHCTTCSCCCEEEEEECSCCCHHHHHHHHHHHHHHHGGGTHHH
T ss_pred HHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCHHHHHHH
T ss_conf 99988875488887787676435288999999999984458877842799854565205578999999986198889999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~ 240 (403)
T d3b55a1 161 EEKIKGLIPVTKDMNTFESLTKEEKEKYVLDAKTISALLEENKSYLNGKSKEFAWIKQNARIIEQFTTMLATPPDKPADF 240 (403)
T ss_dssp HHHHHHHGGGSSSHHHHHTSCHHHHHHHHHHHHHHHHHHHHTGGGGTTTSHHHHHHHHHHHHHHHHHHHTTCCTTCTTHH
T ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_conf 99874123333465667764155578899999999999998476541274679999999999999999998456774667
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~RD~~Maenl~wl~~~~~kiivwaHN~Hi~~~~~~~~~~~~~~G~~L~e~~G~~y~~IG~~~~~G~v~a~~~~~~~~~ 320 (403)
T d3b55a1 241 YLKHDIAMYENAKWTEEHLGKTIVWGHNGHVSKTNMLSFIYPKVAGQHLAEYYGKRYVSIGTSVYEGQYNVKNSDGEFGP 320 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSEEEEEEHHHHSSSCSCTTTCSSCHHHHHHHHHGGGEEEEEEEEEEEEEEEECTTSCEEE
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCEEECCCCCCCCCC
T ss_conf 77899999999999870689889995705425677554557554889999884874499999734640512567788663
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~v~~~~~~S~E~~l~~~~~~~~~ldlr~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~fDali~i~~~tP~ 400 (403)
T d3b55a1 321 YGTLKSDDPNSYNYIFGQVKKDQFFIDLRKANGVTKTWLNEQHPIFAGITTEGPDIPKTVDISLGKAFDILVQIQKVSPS 400 (403)
T ss_dssp EEECCCCCTTSHHHHHHTSSCSEEEEEGGGCCHHHHHHHTSCEEEECCCSBCBTTBCSEEEECHHHHCSEEEEEEEECBC
T ss_pred EEECCCCCCCCHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHCCEEEEECCCCCC
T ss_conf 02227999988999997369986898764365331557630424045357898666754058859969589996565745
Q ss_pred --E
Q ss_conf --8
Q 002647 518 --G 518 (897)
Q Consensus 518 --a 518 (897)
-
T Consensus 401 ~~~ 403 (403)
T d3b55a1 401 QVH 403 (403)
T ss_dssp CBC
T ss_pred CCC
T ss_conf 369
|
| >d1dofa_ a.127.1.1 (A:) Adenylosuccinate lyase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: L-aspartase-like superfamily: L-aspartase-like family: L-aspartase/fumarase domain: Adenylosuccinate lyase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=100.00 E-value=0 Score=30346.26 Aligned_cols=1 Identities=0% Similarity=-0.459 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~sP~d~ry~~~~~~~ifs~~~~~~~~l~ve~a~a~a~~e~G~ip~~~a~~i~~~~~d~~~i~~~e~~~~hdv~a~~~~l 80 (402)
T d1dofa_ 1 HVSPFDWRYGSEEIRRLFTNEAIINAYLEVERALVCALEELGVAERGCCEKVNKASVSADEVYRLERETGHDILSLVLLL 80 (402)
T ss_dssp CCCGGGTTSSCHHHHTTSSHHHHHHHHHHHHHHHHHHHHHTTSSCTTHHHHHHHCCCCTTTC--------CHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 92987656498899987294999999999999999999874989889999998723388999999988589804799998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~vH~G~TsnDi~~ta~~l~~r~~~~~l~~~l~~l~~~L~~~a~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~ 160 (402)
T d1dofa_ 81 EQKSGCRYVHYGATSNDIIDTAWALLIRRALAAVKEKARAVGDQLASMARKYKTLEMVGRTHGQWAEPITLGFKFANYYY 160 (402)
T ss_dssp HHHHCCSCTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 65347888502676487661598999986466788899999999999987640211003765256554229988888999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~l~r~~~rl~~~~~~~~~~~gGa~g~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~~~~rd~~~e~~~~L~~~a~~L~kia 240 (402)
T d1dofa_ 161 ELYIACRQLALAEEFIRAKIGGAVGTMASWGELGLEVRRRVAERLGLPHHVITTQVAPRESFAVLASALALMAAVFERLA 240 (402)
T ss_dssp HHHHHHHHHHHHHHHCCBCCCCTTSSCGGGGGGHHHHHHHHHHHTTCCBCSSCSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999875034566552224430445789999887345555235555541001688999888898999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~Di~~~s~~e~ge~~e~~~GSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~erd~~~~~~~~~~l~~~~~~~~ 320 (402)
T d1dofa_ 241 VEIRELSRPEIGEVVEGGGGSSAMPHKANPTASERIVSLARYVRALTHVAFENVALWHERDLTNSANERVWIPEALLALD 320 (402)
T ss_dssp HHHHHHTSTTTCSEESCC---------CCCHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHH
T ss_conf 99999717753541134675410258878428998724378887888999875124432120245655302532599999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~l~~~~~~l~~l~vn~erm~~~l~~s~~~i~ae~~~~~L~~~gl~~~~Ah~~v~~~~~~a~e~~k~~~e~l~~d~~~l~ 400 (402)
T d1dofa_ 321 EILTSALRVLKNVYIDEERITENLQKALPYILTEFHMNRMIKEGASRAEAYKKAKEVKALTFEYQKWPVERLIEDALSLK 400 (402)
T ss_dssp HHHHHHHHHHHHCEECHHHHHHHHHHHHHHHCHHHHHHHHHHTTCCHHHHHHHHTTCCCCCCGGGGCCHHHHHHHHHTSC
T ss_pred HHHHHHHHHHCCCEECHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHCC
T ss_conf 99999999876499989999999985158667999999999869999999999999999999958985999860825147
Q ss_pred -E
Q ss_conf -8
Q 002647 518 -G 518 (897)
Q Consensus 518 -a 518 (897)
+
T Consensus 401 l~ 402 (402)
T d1dofa_ 401 LC 402 (402)
T ss_dssp CC
T ss_pred CC
T ss_conf 89
|
| >d2g5da1 b.52.1.4 (A:40-441) Membrane-bound lytic murein transglycosylase A, MLTA {Neisseria gonorrhoeae [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double psi beta-barrel superfamily: Barwin-like endoglucanases family: MLTA-like domain: Membrane-bound lytic murein transglycosylase A, MLTA species: Neisseria gonorrhoeae [TaxId: 485]
Probab=100.00 E-value=0 Score=30344.24 Aligned_cols=1 Identities=0% Similarity=-0.825 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 p~~p~~~p~pa~~~~~~~~a~~~~vsf~~LpGW~~dd~~~al~af~~sC~~l~~~~~w~~~C~~a~~~~~~~~~aR~Ffe 80 (402)
T d2g5da1 1 PDRPAGIPDPAGTTVAGGGAVYTVVPHLSMPHWAAQDFAKSLQSFRLGCANLKNRQGWQDVCAQAFQTPIHSFQAKRFFE 80 (402)
T ss_dssp CCCCCCCCCCTTCEEEETTEEEEECCGGGSTTCTTCCHHHHHHHHHHHHHHHTTSTTCHHHHHHHHTSCSSHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_conf 98887899997654567764234546888889740139999999999877503246789999999717998099999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~F~p~~v~~~g~~~Gl~TGYYEP~l~gS~~r~~~y~~PlY~~P~DLv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (402)
T d2g5da1 81 RYFTPWQVAGNGSLAGTVTGYYEPVLKGDGRRTERARFPIYGIPDDFISVPLPAGLRGGKNLVRIRQTGKNSGTIDNAGG 160 (402)
T ss_dssp HHEEEEEEEETTBSCEEEEEEEECEEEEESSCCSSCCEEEEBSCTTCEEEECC--------CEEECCCBTTBCC------
T ss_pred HHCEEEEEECCCCCCEEEEEEECEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 72789998407987525877403057653366888887734589532225555433322222222334455443334444
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~dl~~~~~~~~~~~~~gR~~~~~~vPY~~R~eI~~g~l~~~~~elaW~~Dpvd~FFLqIQGSGrl~l~dG~~~rvgY 240 (402)
T d2g5da1 161 THTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYAEDPVELFFMHIQGSGRLKTPSGKYIRIGY 240 (402)
T ss_dssp -EEECTTTSCCCSCCSEEEEEEETTEEEECCCHHHHHTTTTTTSSCEEEEESCHHHHHHHHHHSCEEEECTTSCEEEEEE
T ss_pred CCCCCCCCCCCCCCCHHHEEECCCCCCCCCCCHHHHHCCCCCCCCCEEEEECCHHHHHHEEECCCEEEEECCCCEEEEEE
T ss_conf 33354112563222101100102785134776999864875677745788378255352665263699937999899986
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ag~NG~pY~sIGr~Li~~G~i~~~~~Smq~Ir~Wl~~nP~~~~ell~~NpsYVFFr~~~~~~~~GP~Ga~gvpLtp~rSi 320 (402)
T d2g5da1 241 ADKNEHPYVSIGRYMADKGYLKLGQTSMQGIKAYMRQNPQRLAEVLGQNPSYIFFRELAGSGGDGPVGALGTPLMGEYAG 320 (402)
T ss_dssp EEECCCCCCCHHHHHHTTTSSCTTSCSHHHHHHHHHHCGGGHHHHHTTCCCCEEEEEC-----CCCBCTTSSBCCTTSEE
T ss_pred CCCCCCCCEEHHHHHHHCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEE
T ss_conf 36789965108999976698671128999999999979799999997499749988778888899864367756677046
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 AvD~~~iPlG~pv~l~t~~p~~~~~~~rL~iAQDTGgAIkG~~R~D~f~G~G~~Ag~~AG~mk~~G~~~~LlPk~~~p~~ 400 (402)
T d2g5da1 321 AIDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKGAVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEY 400 (402)
T ss_dssp EECTTTSCTTCEEEEEEECTTTCSEEEEEEEEEEECTTCCSSSEEEEEEEESHHHHHHHHHCEEEEEEEEEEETTCCCCC
T ss_pred EECCCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHCCCCCEEEEEEECCCCCCCC
T ss_conf 61776257887389974577778850027998515765348861698751888999887452575259999528888677
Q ss_pred -E
Q ss_conf -8
Q 002647 518 -G 518 (897)
Q Consensus 518 -a 518 (897)
-
T Consensus 401 ~~ 402 (402)
T d2g5da1 401 RP 402 (402)
T ss_dssp CC
T ss_pred CC
T ss_conf 97
|
| >d1xk7a1 c.123.1.1 (A:4-405) Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-transferase family III (CaiB/BaiF) superfamily: CoA-transferase family III (CaiB/BaiF) family: CoA-transferase family III (CaiB/BaiF) domain: Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=30343.58 Aligned_cols=1 Identities=0% Similarity=-0.692 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~~~~gPL~GirVld~~~~~agp~~~~~Lad~GAeVIkvE~p~~gd~~r~~~~~~~~~n~~K~si~ldl~~~~G~~~~~ 80 (402)
T d1xk7a1 1 LPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFL 80 (402)
T ss_dssp CCCCCCSTTTTCEEEEECCSSHHHHHHHHHHHTTCEEEEEECSSSCCGGGGSSSHHHHHTTTCEEEEECTTSHHHHHHHH
T ss_pred CCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCHHHHHHHH
T ss_conf 98899969999888883780289999999998299599989999997434588516773899859998693978999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~Lv~~aDv~i~n~rpg~~~~lGl~~~~L~~~nP~lI~~sisgfG~~~~gp~~~~~~~D~~~qA~sG~~~~~G~~~~p~~~ 160 (402)
T d1xk7a1 81 KLMETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPMPA 160 (402)
T ss_dssp HHHTTCSEEEEECSSSHHHHTTCCHHHHHHHCTTCEEEEEESSCSSSCTTTTTSCCCHHHHHHHHTSGGGSEETTEECCC
T ss_pred HHHHHCCCCEEEECCCCCCCCCCCCCCHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC
T ss_conf 98750587534101222113465421001002443213655565776765467777663212210000101455455433
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~d~~~g~~aa~ailaAL~~r~~TG~Gq~VdvSm~e~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~y~~~D 240 (402)
T d1xk7a1 161 FPYTADYFSGLTATTAALAALHKVRETGKGESIDIAMYEVMLRMGQYFMMDYFNGGEMCPRMSKGKDPYYAGCGLYKCAD 240 (402)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHTHHHHHHHHTTSCCCCCBBTTBCSSBTTEEEEEETT
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCC
T ss_conf 44322123124431345777640345788665443432201344321111000123332222234677422458553146
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 G~i~i~~~~~~~~~~l~~~~g~~~l~~dp~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~t~~e~~~~l~~~gvp~apV~ 320 (402)
T d1xk7a1 241 GYIVMELVGITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVL 320 (402)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCGGGTTSSSSCTTCCCCBTTTSTTHHHHHHHHHHHHHTSCHHHHHHHHHHTTCEEEECC
T ss_pred CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEECCC
T ss_conf 76211233222222201121001222322233322221000366778899999999865021145566550795010478
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~e~~~dpq~~~r~~~~~~~~~~~g~~~~p~~p~~fs~t~~~~~~~aP~lGeht~eIL~eLG~s~~eI~~L~~~gvi~~ 400 (402)
T d1xk7a1 321 TVPELESNPQYVARESITQWQTMDGRTCKGPNIMPKFKNNPGQIWRGMPSHGMDTAAILKNIGYSENDIQELVSKGLAKV 400 (402)
T ss_dssp CGGGSTTCHHHHHHTCEEEEECTTSCEEEEECCSSCCSSSCCCCCCCCCCTTTTHHHHHHHTTCCHHHHHHHHHTTSEEC
T ss_pred CHHHHHHCHHHHHHCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCEEC
T ss_conf 99998779898971999988768997667305770158999887899999985499999986999999999998829868
Q ss_pred -E
Q ss_conf -8
Q 002647 518 -G 518 (897)
Q Consensus 518 -a 518 (897)
-
T Consensus 401 ~~ 402 (402)
T d1xk7a1 401 ED 402 (402)
T ss_dssp CC
T ss_pred CC
T ss_conf 89
|
| >d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cytochrome P450-ERYF species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=100.00 E-value=0 Score=30343.30 Aligned_cols=1 Identities=100% Similarity=2.131 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~f~~dpy~~y~~lr~~gPv~~~~~~g~~~~vvt~~e~v~~vl~d~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 80 (402)
T d1z8oa1 1 TVPDLESDSFHVDWYRTYAELRETAPVTPVRFLGQDAWLVTGYDEAKAALSDLRLSSDPKKKYPGVEVEFPAYLGFPEDV 80 (402)
T ss_dssp CCCBTTSGGGTSSHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCTTEECCTTCCCTTCCCCCGGGTTCCHHH
T ss_pred CCCCCCCHHHHHCHHHHHHHHHHCCCEEEEEECCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 98787974566594999999983499789850895389988999999996497534483112565544564223442667
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~l~~~dg~~H~~~R~~l~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 160 (402)
T d1z8oa1 81 RNYFATNMGTSDPPTHTRLRKLVSQEFTVRRVEAMRPRVEQITAELLDEVGDSGVVDIVDRFAHPLPIKVICELLGVDEK 160 (402)
T ss_dssp HHHHSSSGGGCCTTHHHHHHHHHHTTSCHHHHHHTHHHHHHHHHHHHHTSCSSSEEEHHHHTTTHHHHHHHHHHTTCCGG
T ss_pred HHHHCCCCCCCCHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 77741562016577776420212210243205677888899999875203222223333212330344556666300377
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~d~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~aG 240 (402)
T d1z8oa1 161 YRGEFGRWSSEILVMDPERAEQRGQAAREVVNFILDLVERRRTEPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAG 240 (402)
T ss_dssp GTTTHHHHHHHHHCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCEETTTEECCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
T ss_conf 88888888889875065112566788899999999988999728887779999985664288787789888888873064
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~dTt~~~l~~~l~~l~~~P~~~~~l~~e~~~~~~~~~~~~~~~~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d 320 (402)
T d1z8oa1 241 FEASVSLIGIGTYLLLTHPDQLALVRRDPSALPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRD 320 (402)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHHHHHHTCSSCCEEEEESSCEEETTEEECTTCEEEECHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
T ss_conf 54315678888888765058999975013445430155654220244332134567555784134543022334452168
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 p~~f~dP~~F~PeR~~~~~lpFG~G~r~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~ 400 (402)
T d1z8oa1 321 PKQFPDPHRFDVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVVWRRSLLLRGIDHLPVRL 400 (402)
T ss_dssp TTTSSSTTSCCTTSCCTTCCTTCSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCCCCCSSSCCCSCCEEET
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEECCCCCCCCCCCEEEEE
T ss_conf 53278911228899999988989986578139999999999999999967977578887876352787668988557996
Q ss_pred -E
Q ss_conf -8
Q 002647 518 -G 518 (897)
Q Consensus 518 -a 518 (897)
|
T Consensus 401 ~~ 402 (402)
T d1z8oa1 401 DG 402 (402)
T ss_dssp TC
T ss_pred CC
T ss_conf 59
|
| >d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: N-acylglucosamine (NAG) epimerase domain: N-acyl-D-glucosamine 2-epimerase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=0 Score=30343.09 Aligned_cols=1 Identities=0% Similarity=-0.393 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~l~~ilpfW~~~~~D~~~GGf~~~ld~dg~~~~~~k~~~~~~R~l~~fs~a~~~~~~~~~~~~ 80 (402)
T d1fp3a_ 1 MEKERETLQAWKERVGQELDRVMAFWLEHSHDREHGGFFTCLGRDGRVYDDLKYVWLQGRQVWMYCRLYRKLERFHRPEL 80 (402)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSBCTTTSSBCCCBCTTSCBSCCCEEHHHHHHHHHHHHHHHHHCGGGCCHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCHHH
T ss_conf 94168999999999999999999878855807678972143789998579886365549999999999997463489899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~a~~g~~~L~~~~~~d~~~Gg~~~~vd~dG~~~~~~k~~Yd~Af~l~a~a~~~~~tg~~~~~~~a~~~~~~i~~~~~~ 160 (402)
T d1fp3a_ 81 LDAAKAGGEFLLRHARVAPPEKKCAFVLTRDGRPVKVQRSIFSECFYTMAMNELWRVTAEARYQSEAVDMMDQIVHWVRE 160 (402)
T ss_dssp HHHHHHHHHHHHHHTBSSTTSCCBCSEECTTSCEEECCSSSHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999999999981883589998898878999967654564120899999899886039989999999999999998421
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~g~~~~~~~~~~~~~g~~~~m~l~ea~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 240 (402)
T d1fp3a_ 161 DPSGLGRPQLPGAVASESMAVPMMLLCLVEQLGEEDEELAGRYAQLGHWCARRILQHVQRDGQAVLENVSEDGEELSGCL 240 (402)
T ss_dssp CGGGGCCCCCTTSCCEEETHHHHHHHHHHHHHHTTCHHHHHHTHHHHHHHHHHHHTTEETTTTEECSEEETTSCBCCHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCC
T ss_conf 56888741247875434354179999999997343430579999999999998875016541257764314667666834
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~i~pGh~~e~~wLll~a~~~~~~~~~~~~a~~~~~~~~~~~g~d~~~ggl~~~~~~~g~~~~~~~~~~k~~W~qaE~i 320 (402)
T d1fp3a_ 241 GRHQNPGHALEAGWFLLRHSSRSGDAKLRAHVIDTFLLLPFRSGWDADHGGLFYFQDADGLCPTQLEWAMKLWWPHSEAM 320 (402)
T ss_dssp HHEECHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTHHHHHHHBCTTTCSBCSCEETTSCCCSSTTTTCEEHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 47278502359999999999873990479999999999999829557899588875378886655441377787899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~a~l~ly~~tgd~~~l~~a~~l~~~~~~~f~D~~~G~W~~~~~~~g~~~~~~k~~p~~~~YH~~ral~~~~~~l~~~~~~ 400 (402)
T d1fp3a_ 321 IAFLMGYSESGDPALLRLFYQVAEYTFRQFRDPEYGEWFGYLNREGKVALTIKGGPFKGCFHVPRCLAMCEEMLSALLSR 400 (402)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBCTTTSSBCCEECTTSCEEECCSSCSSCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99999987049989999999999999986877999766743899989986677888898461899999999999999851
Q ss_pred -E
Q ss_conf -8
Q 002647 518 -G 518 (897)
Q Consensus 518 -a 518 (897)
+
T Consensus 401 ~~ 402 (402)
T d1fp3a_ 401 LA 402 (402)
T ss_dssp HC
T ss_pred CC
T ss_conf 39
|
| >d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cyp154a1 monooxygenase species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=0 Score=30265.34 Aligned_cols=1 Identities=0% Similarity=-0.028 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~dp~~~d~~~~~~~lr~~Gpv~~~~~~g~~~vvv~~~~~v~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (401)
T d1odoa_ 1 ALVLDPTGADHHTEHRTLREGGPATWVDVLGVQAWSVSDPVLLKQLLTSSDVSKDARAHWPAFGEVVGTWPLALWVAVEN 80 (401)
T ss_dssp CEECCTTCTTHHHHHHHHHTTCSEEEEEETTEEEEEECCHHHHHHHTTCTTEESCHHHHCTTHHHHTTTCTTTHHHHCCS
T ss_pred CEECCCCCCCHHHHHHHHHHHCCEEEEECCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC
T ss_conf 94358899981999999996399899964991199988999999996397724366666532223455541123304787
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 l~~~~g~~h~~~R~~l~~~fs~~~v~~~~~~i~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~~~ 160 (401)
T d1odoa_ 81 MFTAYGPNHRKLRRLVAPAFSARRVDAMRPAVEAMVTGLVDRLAELPAGEPVDLRQELAYPLPIAVIGHLMGVPQDRRDG 160 (401)
T ss_dssp GGGCCHHHHHHHHHTTGGGGSHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCEEHHHHTTTHHHHHHHHHHHTCCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHH
T ss_conf 62388599999999877651721477777788999999976422013332222321000000011221235653112123
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ei~~~~~~l~~~g~~t 240 (401)
T d1odoa_ 161 FRALVDGVFDTTLDQAEAQANTARLYEVLDQLIAAKRATPGDDMTSLLIAARDDEGDGDRLSPEELRDTLLLMISAGYET 240 (401)
T ss_dssp HHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHCC-----CCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 44455554310102578899999999999987664136776642232112333334689799999999999998656521
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~e~~R~~p~~~~~~~~~~~~d~~~~~G~~ip~Gt~v~~~~~~~hrd~ 320 (401)
T d1odoa_ 241 TVNVIDQAVHTLLTRPDQLALVRKGEVTWADVVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHP 320 (401)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHTSSCHHHHHHHHHHHSCSBSCEEEEEESSCEECTTSCEECTTCEEEECHHHHTTCT
T ss_pred HHHHHHHHHCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCEEECCCCCCCCCHHHHHCCC
T ss_conf 02355543201343214431001233311000001111112455333322346525229779617952324488870772
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~~dp~~F~PeR~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~ 400 (401)
T d1odoa_ 321 DWHEDADTFDATRTVKEHLAFGHGVHFCLGAPLARMEVTLALESLFGRFPDLRLADPAEELPPVPSLISNGHQRLPVLLH 400 (401)
T ss_dssp TTSTTTTSCCTTCSCCCCCTTCSSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESCTTSCCCBCSCSSBCCBSCCEEECC
T ss_pred CCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 22896543287878999987789884783599999999999999999779868899877771467875579874059983
Q ss_pred E
Q ss_conf 8
Q 002647 518 G 518 (897)
Q Consensus 518 a 518 (897)
|
T Consensus 401 ~ 401 (401)
T d1odoa_ 401 A 401 (401)
T ss_dssp -
T ss_pred C
T ss_conf 9
|
| >d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: RecA protein-like (ATPase-domain) domain: Extracellular secretion NTPase EpsE species: Vibrio cholerae [TaxId: 666]
Probab=100.00 E-value=0 Score=30268.26 Aligned_cols=1 Identities=0% Similarity=0.039 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~pi~~lv~~ll~~A~~~~ASDIHi~~~~~~~~V~~RidG~L~~~~~~~~~~~~~l~~~~ 80 (401)
T d1p9ra_ 1 DFFSLAEELPQNEDLLESEDDAPIIKLINAMLGEAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVSRV 80 (401)
T ss_dssp CHHHHHHC-------------CHHHHHHHHHHHHHHHHTCSEEEEEEETTEEEEEEEETTEEEEEECCCGGGHHHHHHHH
T ss_pred CHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCEEEECCCCCCCHHHHHHHHH
T ss_conf 95464312787344654257767999999999999982980599981788846999989998887888855699999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~a~~~~~~~~~~q~g~~~~~~~~~~i~~Rv~~~p~~~g~~~vlRl~~~~~~~~~l~~LG~~~~~~~~l~~l~~~~~Gl 160 (401)
T d1p9ra_ 81 KVMAKLDIAEKRVPQDGRISLRIGGRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLHSLGMTAHNHDNFRRLIKRPHGI 160 (401)
T ss_dssp HHHTTCCTTCCSSCEEEEEEC-----CEEEEEEEECCTTSCEEEECCEETTTTCCCGGGSCCCHHHHHHHHHHHTSSSEE
T ss_pred HHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCE
T ss_conf 98513678887530120022313894488754442202344566543112332001443013577789999998641054
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 iLvtGpTGSGKSTTl~~~l~~~~~~~~~i~tiEdPiE~~~~~~~q~~v~~~~~~~~~~~l~~~lR~dPDvi~igEiRd~~ 240 (401)
T d1p9ra_ 161 ILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDLE 240 (401)
T ss_dssp EEEECSTTSCHHHHHHHHHHHHCCTTSCEEEEESSCCSCCSSSEEEECBGGGTBCHHHHHHHHGGGCCSEEEESCCCSHH
T ss_pred EEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEECCCCCHH
T ss_conf 89876787774477999866625787469996267434567887026558767799999999984138889845768759
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ta~~a~~aa~tGhlV~tTlHa~~a~~~~~Rl~~~~~~~~~l~~~l~~vv~QrLv~~lCp~Ck~~~~~~~~~~~~~~~~~~ 320 (401)
T d1p9ra_ 241 TAQIAVQASLTGHLVMSTLHTNTAVGAVTRLRDMGIEPFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQRKLFDSKKK 320 (401)
T ss_dssp HHHHHHHHHHTTCEEEEEECCSSSHHHHHHHHHHTCCHHHHHHHEEEEEEEEEEEEECTTTCEEEECCHHHHTTC-----
T ss_pred HHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHCCCCCC
T ss_conf 99999999724985899833676676654321002445667777898874205342188867688999999962354545
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~~~~~~~GC~~C~~~Gy~GR~~v~Evl~~d~~l~~~I~~~~~~~~l~~~~~~g~~tl~~~a~~~v~~G~~s~eEv~R~ 400 (401)
T d1p9ra_ 321 EPLILYRATGCPKCNHKGYRGRTGIHELLLVDDALQELIHSEAGEQAMEKHIRATTPSIRDDGLDKVRQGITSLEEVMRG 400 (401)
T ss_dssp CCCEEEECCCCSSSCSSSEEEEEEEEEEEECCHHHHHHHHTTCCHHHHHHHHHTTCCCHHHHHHHHHHTTSSCHHHHHHH
T ss_pred CCEEEEECCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHC
T ss_conf 66379808996303799888732999998189999999984998999999998099029999999998599989998243
Q ss_pred E
Q ss_conf 8
Q 002647 518 G 518 (897)
Q Consensus 518 a 518 (897)
-
T Consensus 401 ~ 401 (401)
T d1p9ra_ 401 S 401 (401)
T ss_dssp C
T ss_pred C
T ss_conf 9
|
| >d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: 2-amino-3-ketobutyrate CoA ligase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=30267.68 Aligned_cols=1 Identities=0% Similarity=-0.160 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~m~~~~~~~~~~~l~~~~~~g~~r~~~~i~~~~g~~v~~~dG~~~l~f~s~dYLGl~~hp~v~~a~~~a~~~~g~~~~ 80 (401)
T d1fc4a_ 1 GSHMRGEFYQQLTNDLETARAEGLFKEERIITSAQQADITVADGSHVINFCANNYLGLANHPDLIAAAKAGMDSHGFGMA 80 (401)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCSCSSSEEEBTTSCEEEECCCSCTTSCTTCHHHHHHHHHHHHHHCSCCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 96044899999999999999759987513304788884893499889998765402546899999999999998198865
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~sr~~~g~~~~~~~lE~~lA~~~g~e~al~~~SG~~An~~~i~~l~~~~d~i~~d~~~h~s~~~G~~~~~a~~~~~~~~d 160 (401)
T d1fc4a_ 81 SVRFICGTQDSHKELEQKLAAFLGMEDAILYSSCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANND 160 (401)
T ss_dssp SCHHHHCCBHHHHHHHHHHHHHHTCSEEEEESCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECTTC
T ss_pred CCEEECCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHCCCCCCCCEEEEECCCC
T ss_conf 42131257088999999888761677447734445666789997457886899677643888705122575079975788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~le~~~~~~~~~~~~~~liv~egv~s~~G~~~~L~~l~~L~~~~~a~LivDeah~~g~~g~~G~G~~~~~~~~~~~di 240 (401)
T d1fc4a_ 161 MQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDI 240 (401)
T ss_dssp HHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSE
T ss_pred HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCCCCHHCCCCCCCEE
T ss_conf 47899999985514567159997577789895565057898875428189800210145145799850101268888729
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 i~~tl~Ka~gg~~Gg~v~g~~~~~~~l~~~~~~~~~s~~l~p~~~~aa~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~g 320 (401)
T d1fc4a_ 241 ITGTLGKALGGASGGYTAARKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAAG 320 (401)
T ss_dssp EEEESSSTTCSSSCEEEEECHHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEECCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99651430156776111378789999871792665067888788998875431234689999999987899986401358
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~~~~~~pIv~v~~~~~~~a~~~~~~L~~~Gi~v~~i~~PtVp~g~~~lRi~~~a~hT~edId~~v~al~ev~~~lg~i 400 (401)
T d1fc4a_ 321 FTLAGADHAIIPVMLGDAVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQLGVI 400 (401)
T ss_dssp CCBCCSSSSEEEEEEECHHHHHHHHHHHHHTTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHTTSC
T ss_pred CCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 76379999879999799999999999999789059758899789998439999787799999999999999999984888
Q ss_pred E
Q ss_conf 8
Q 002647 518 G 518 (897)
Q Consensus 518 a 518 (897)
+
T Consensus 401 ~ 401 (401)
T d1fc4a_ 401 A 401 (401)
T ss_dssp C
T ss_pred C
T ss_conf 9
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=0 Score=30265.82 Aligned_cols=1 Identities=0% Similarity=-0.825 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 mkil~~~~gt~Gh~~P~lala~~L~~~Gh~V~~~~~~~~~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (401)
T d1iira_ 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEVGVPHVPVGPSARAPIQRAKPLTAEDVRRFTTEAI 80 (401)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCCEEECCC-------CCSCCCHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 97999889872689999999999998799899996830677898769748977850654541035200799999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (401)
T d1iira_ 81 ATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPSPYYPPPPLGEPSTQDTIDIPAQWERNNQ 160 (401)
T ss_dssp HHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCCSSSCCCC---------CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHH
T ss_conf 99999999976147642774124257888988887535422344565445532356412466542100001135566566
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (401)
T d1iira_ 161 SAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTDHPWVAADPVLAPLQPTDLDAVQTGAWILPDERPLSPELAAFLDAGPPP 240 (401)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCCCCCSSCCEECCCCCCCCCCCCCHHHHHHHHTSSCC
T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCE
T ss_conf 77877778888999984476410233210231023235644467777654332236755676555677888763148975
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 i~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~~~~~~V~hgG~~t~~Eal~~ 320 (401)
T d1iira_ 241 VYLGFGSLGAPADAVRVAIDAIRAHGRRVILSRGWADLVLPDDGADCFAIGEVNHQVLFGRVAAVIHHGGAGTTHVAARA 320 (401)
T ss_dssp EEEECC---CCHHHHHHHHHHHHHTTCCEEECTTCTTCCCSSCGGGEEECSSCCHHHHGGGSSEEEECCCHHHHHHHHHH
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHCCEEEECCCCHHHHHHHHH
T ss_conf 99715754665689999999999769807984267764233578978997025879999545899963771699999981
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 GvP~v~~P~~~DQ~~na~~l~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~a~~~~~~~~~~~~~~aa~~i~~~i~r 400 (401)
T d1iira_ 321 GAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALATALTPETHARATAVAGTIRTDGAAVAARLLLDAVSR 400 (401)
T ss_dssp TCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHSCSCHHHHHHHHHHHHHHT
T ss_pred CCCEEECCCCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
T ss_conf 99999806614179999999987988876847899999999999996979999999999998750839999999999846
Q ss_pred E
Q ss_conf 8
Q 002647 518 G 518 (897)
Q Consensus 518 a 518 (897)
-
T Consensus 401 ~ 401 (401)
T d1iira_ 401 E 401 (401)
T ss_dssp C
T ss_pred C
T ss_conf 9
|
| >d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cytochrome P450epok species: Sorangium cellulosum [TaxId: 56]
Probab=100.00 E-value=0 Score=30265.33 Aligned_cols=1 Identities=0% Similarity=0.039 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~p~~~~dP~~~~~~lr~~gPv~~~~~~~~~vvt~~~~v~~vl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (401)
T d1q5da_ 1 DFKPFAPGYAEDPFPAIERLREATPIFYWDEGRSWVLTRYHDVSAVFRDERFAVSREEWESSAEYSSAIPELSDMKKYGL 80 (401)
T ss_dssp CCCTTSTTTTTCCHHHHHHHHHHCSEEEETTTTEEEECSHHHHHHHHTCTTEECCGGGSTTHHHHHHSSGGGHHHHHHST
T ss_pred CCCCCCHHHHHCCHHHHHHHHHCCCEEEECCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCC
T ss_conf 97989867885949999999846998997999989983999999996598735475433454444655510233013651
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~dg~~h~~~Rk~l~~~fs~~~l~~~~~~i~~~~~~l~~~~~~~~~~d~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (401)
T d1q5da_ 81 FGLPPEDHARVRKLVNPSFTSRAIDLLRAEIQRTVDQLLDARSGQEEFDVVRDYAEGIPMRAISALLKVPAECDEKFRRF 160 (401)
T ss_dssp TTSCHHHHHHHHHHHGGGGSHHHHGGGHHHHHHHHHHHHHHHTTSSCEETTTTTGGGSHHHHHHHHTTCCGGGHHHHHHH
T ss_pred CCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
T ss_conf 46888889876320421134213566788889888888876531011111578776543101100001100237888888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~l~~l~~~~~~~~~~~~~~i~~~~~~~l~ag 240 (401)
T d1q5da_ 161 GSATARALGVGLVPRVDEETKTLVASVTEGLALLHGVLDERRRNPLENDVLTMLLQAEADGSRLSTKELVALVGAIIAAG 240 (401)
T ss_dssp HHHHHHHTTTTTSSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHSSTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 99999875112222101677888899999999999877754125644327889876304565207889999999987046
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~etta~~l~~~l~~L~~~p~~~e~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~d~~~~g~~ip~G~~v~~~~~~~~r 320 (401)
T d1q5da_ 241 TDTTIYLIAFAVLNLLRSPEALELVKAEPGLMRNALDEVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALR 320 (401)
T ss_dssp SHHHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHHHHHHSCSBSSEEEEEESSCEEETTEEECTTCEEEEEHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC
T ss_conf 32024677778999975299999864465323343210000011134433323345620257666764067421002478
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 dp~~f~dP~~F~PeR~~~~~lpFg~G~r~C~G~~lA~~e~~~~la~ll~rf~~~~l~~~~~~~~~~~~r~~~~l~v~~~p 400 (401)
T d1q5da_ 321 DGTVFSRPDVFDVRRDTSASLAYGRGPHVCPGVSLARLEAEIAVGTIFRRFPEMKLKETPVFGYHPAFRNIESLNVILKP 400 (401)
T ss_dssp CTTTSSSTTSCCTTSCCTTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSCCEECCCSSBCCEEECEEESSC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEECCCCCCCCCCCCEEEEEC
T ss_conf 82227995434889999999998997558822999999999999999996799848899840678765686645399961
Q ss_pred E
Q ss_conf 8
Q 002647 518 G 518 (897)
Q Consensus 518 a 518 (897)
.
T Consensus 401 ~ 401 (401)
T d1q5da_ 401 S 401 (401)
T ss_dssp C
T ss_pred C
T ss_conf 9
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=0 Score=30264.67 Aligned_cols=1 Identities=0% Similarity=-0.891 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 mrIl~~~~gt~Ghv~P~l~lA~~L~~rGh~V~~~t~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (401)
T d1rrva_ 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEVGVPHVPVGLPQHMMLQEGMPPPPPEEEQRLAAMT 80 (401)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHTCCEEECSCCGGGCCCTTSCCCCHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHCCCEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHH
T ss_conf 94999889875689999999999998799899997834677898779748976870776421566543378999989999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~a~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (401)
T d1rrva_ 81 VEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLASPHLPPAYDEPTTPGVTDIRVLWEERAA 160 (401)
T ss_dssp HHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCCSSSCCCBCSCCCTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99999999999844898599982842668999999827974000000000102556423465556532001246788887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~v 240 (401)
T d1rrva_ 161 RFADRYGPTLNRRRAEIGLPPVEDVFGYGHGERPLLAADPVLAPLQPDVDAVQTGAWLLSDERPLPPELEAFLAAGSPPV 240 (401)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCSSCEECSCTTTSCCCSSCCCEECCCCCCCCCCCCCHHHHHHHHSSSCCE
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHCCHHHHCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCEE
T ss_conf 77765478999999983785331255430354211011133203577788689788866655459989997522479839
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~I~hgG~~t~~Eal~ 320 (401)
T d1rrva_ 241 HIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRGWTELVLPDDRDDCFAIDEVNFQALFRRVAAVIHHGSAGTEHVATR 320 (401)
T ss_dssp EECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECTTTTCCCSCCCTTEEEESSCCHHHHGGGSSEEEECCCHHHHHHHHH
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHCCEEEECCCCHHHHHHHH
T ss_conf 99878644578899999999998626974899505443455457898899731481777621248886177248999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l~~~~~~~~~L~~ai~~vl~~~~r~~a~~~~~~~~~~g~~~aa~~ie~~~~ 400 (401)
T d1rrva_ 321 AGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTTVLAPETRARAEAVAGMVLTDGAAAAADLVLAAVG 400 (401)
T ss_dssp HTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHHHHHHHHHHTSHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred HCCCEEEECCCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
T ss_conf 39998980661208999999998798897574789999999999998497999999999998755179999999999857
Q ss_pred E
Q ss_conf 8
Q 002647 518 G 518 (897)
Q Consensus 518 a 518 (897)
=
T Consensus 401 r 401 (401)
T d1rrva_ 401 R 401 (401)
T ss_dssp C
T ss_pred C
T ss_conf 6
|
| >d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: RCC1/BLIP-II family: Regulator of chromosome condensation RCC1 domain: Regulator of chromosome condensation RCC1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=30264.40 Aligned_cols=1 Identities=0% Similarity=1.035 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
|
T Consensus 1 ~~~~~~h~~~~~~~G~vy~wG~n~~GqLG~g~~~~~~~~P~~v~~~~~i~~ia~G~~h~~al~~~G~vy~wG~n~~GQLG 80 (401)
T d1a12a_ 1 KKVKVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALG 80 (401)
T ss_dssp CCCCCCCTTCCCCCBEEEEEEECTTSTTCSCTTCCEEEEEEEECCSSCEEEEEECSSEEEEEETTSCEEEEECCTTSTTC
T ss_pred CCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEECCCEEECCCCCEEEEEECCCEEEEEECCCEEEEEECCCCCCCC
T ss_conf 93106678999789889999699988889999886503577908999929999189889999679989999589998877
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~g~~~~~~~~~~~~~~~~~~i~~i~~g~~~~~~~~~~g~v~~wG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~g 160 (401)
T d1a12a_ 81 RDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASG 160 (401)
T ss_dssp SCCCSTTGGGSCEECCCCSCEEEEEECSSEEEEEETTSCEEEEECEEETTEEEESSBBTBCEEEEEEECCSSCEEEEEEC
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEC
T ss_conf 44655664235542354220022011100101000345311202145655544666775431001100168850699820
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~g~~~~~G~n~~gqlg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~i~~v~~g~~~~~~l~~~g~ 240 (401)
T d1a12a_ 161 NDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGH 240 (401)
T ss_dssp SSEEEEEETTSCEEEEECCTTSTTCSCGGGTSSSCGGGGHHHHHSCEECCCBCSSCCSBCCEEEEEEETTEEEEEETTCC
T ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCEEEEEECCCE
T ss_conf 35225650378500346687662288875344567755544335652000035677778439999936876999955981
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 v~~~g~n~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~l~~~g~v~~wG~n~~gqlG~g~~~~~~~~P~~ 320 (401)
T d1a12a_ 241 VYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTL 320 (401)
T ss_dssp EEEEECCTTSTTSCSSCSCEEEEEECGGGCCTTCCEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSCTTCCCEEEEEE
T ss_pred EEEECCCCEECCCCCCCCCCEECCCCCCCCCCCEEEEEEEEECCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCEE
T ss_conf 86512221020354566310000010123554036999851012013561489788840334675678862333558888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 i~~~~~i~~Is~G~~hs~alt~dG~v~~WG~n~~GQLG~G~~~~~~~P~~v~~~~~~~~~v~~v~~G~~hs~~l~~d~~~ 400 (401)
T d1a12a_ 321 ISRLPAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLLVKDKEQ 400 (401)
T ss_dssp CCSSSSEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSCSCEEEEEECCSTTTTTEEEEEEEECSSEEEEEEEECSC
T ss_pred CCCCCCEEEEEEECCEEEEEECCCEEEEEECCCCCCCCCCCCCCEECCEEEECCCCCCCEEEEEEECCCEEEEEEECCCC
T ss_conf 57999829999308879999489969999259988778999988860789643578998899999752439999979966
Q ss_pred E
Q ss_conf 8
Q 002647 518 G 518 (897)
Q Consensus 518 a 518 (897)
-
T Consensus 401 ~ 401 (401)
T d1a12a_ 401 S 401 (401)
T ss_dssp C
T ss_pred C
T ss_conf 9
|
| >d1jdpa_ c.93.1.1 (A:) Hormone binding domain of the atrial natriuretic peptide receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Periplasmic binding protein-like I superfamily: Periplasmic binding protein-like I family: L-arabinose binding protein-like domain: Hormone binding domain of the atrial natriuretic peptide receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=30263.35 Aligned_cols=1 Identities=0% Similarity=-0.394 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~a~~~~~i~igvllP~tg~~~~~~~~~~~a~~lAv~~iN~~g~~~~~~~~g~~i~~~~~D~~~~~~~~~~~~~~l~~~~~ 80 (401)
T d1jdpa_ 1 EALPPQKIEVLVLLPQDDSYLFSLTRVRPAIEYALRSVEGNGTGRRLLPPGTRFQVAYEDSDCGNRALFSLVDRVAAARG 80 (401)
T ss_dssp CCCCCCEEEEEEEECSSTTSTTCHHHHHHHHHHHHHHHCC-----CCSCTTCEEEEEEEECTTSTHHHHHHHHHHHHTTT
T ss_pred CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCC
T ss_conf 99899722899997799940221678999999999999866786556789948999998289997999999999997366
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~v~~iiG~~~s~~~~a~~~~~~~~~ip~is~~~~~~~~~~~~~~~~~~fr~~~~~~~~~~al~~~l~~~~~~~v~il~~ 160 (401)
T d1jdpa_ 81 AKPDLILGPVCEYAAAPVARLASHWDLPMLSAGALAAGFQHKDSEYSHLTRVAPAYAKMGEMMLALFRHHHWSRAALVYS 160 (401)
T ss_dssp CCCSEEECCCSHHHHHHHHHHHHHHTCCEEESCCCSGGGGCTTTTTTTEEECSCCHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf 88089999987503678878888619854631445542122345677279831546889999999877517737999995
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~~~i~~~~~~~g~~~~~~~ 240 (401)
T d1jdpa_ 161 DDKLERNCYFTLEGVHEVFQEEGLHTSIYSFDETKDLDLEDIVRNIQASERVVIMCASSDTIRSIMLVAHRHGMTSGDYA 240 (401)
T ss_dssp CCSSSCHHHHHHHHHHHHHHHHTCEEEEEEECTTSCCCHHHHHHHHHHHCSEEEEESCHHHHHHHHHHHHHTTCTTTTCE
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCEE
T ss_conf 68652057899998888736534899740245676268999998632574069999346889999999998188888769
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~a~~~yDav 320 (401)
T d1jdpa_ 241 FFNIELFNSSSYGDGSWKRGDKHDFEAKQAYSSLQTVTLLRTVKPEFEKFSMEVKSSVEKQGLNMEDYVNMFVEGFHDAI 320 (401)
T ss_dssp EEEECSSCCCSTTTCTTCCSSTTHHHHHHHGGGEEEEEECCCCCHHHHHHHHHHHHHHHTTTCCCCSSCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCCCCHHHCCCCCHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
T ss_conf 99633114643347301025542367888865414212458898689999999999984067776666207889999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~l~a~Al~~~~~~~~~~~~~~~l~~~l~~~~f~G~tG~v~fd~~Gdr~~~~~~~~~~~~~~g~~~~Vg~~~~~~~~~~~~ 400 (401)
T d1jdpa_ 321 LLYVLALHEVLRAGYSKKDGGKIIQQTWNRTFEGIAGQVSIDANGDRYGDFSVIAMTDVEAGTQEVIGDYFGKEGRFEMR 400 (401)
T ss_dssp HHHHHHHHHHHHTTCCTTCHHHHHHHHSSEEEEETTEEEEECTTSBBCCEEEEEEEEETTTTEEEEEEEEETTTTEEEEC
T ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEECCCEEEEECCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCEEEEE
T ss_conf 99999999998568999889999999867917717668998999882576799999997898799999998997669974
Q ss_pred E
Q ss_conf 8
Q 002647 518 G 518 (897)
Q Consensus 518 a 518 (897)
=
T Consensus 401 ~ 401 (401)
T d1jdpa_ 401 P 401 (401)
T ss_dssp C
T ss_pred C
T ss_conf 9
|
| >d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aspartate aminotransferase, AAT species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]
Probab=100.00 E-value=0 Score=30263.04 Aligned_cols=1 Identities=0% Similarity=-0.426 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~p~d~i~~~~~~~~~d~~~~~InL~iG~~~d~~~~~~~~~~V~~a~~~~~~~~~~~~Y~~~~G~~~lr~ai 80 (401)
T d7aata_ 1 SSWWSHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRAS 80 (401)
T ss_dssp CCSSTTCCCCCCCHHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
T ss_conf 97010689799986999999983778999588617877688899898789999999996289888889977789999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 a~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~ 160 (401)
T d7aata_ 81 AELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSL 160 (401)
T ss_dssp HHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEE
T ss_pred HHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCEEEEEECCCCCCCCC
T ss_conf 99984247865576753885462578899999876674358985599816777640258998599689985424446665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~iii~~p~NPTG~~~s~e~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~ 240 (401)
T d7aata_ 161 DFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGI 240 (401)
T ss_dssp CHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTC
T ss_pred CHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCHHHHCCCCCCCHHHHHHHHHHHC
T ss_conf 37888888722777618999647889855458999999999987356379998636144314886553356666532201
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~s~sk~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 320 (401)
T d7aata_ 241 DVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMAD 320 (401)
T ss_dssp CCEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 13406751330005515531021261888889888888888764033563057888998841787889999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~~~r~~l~~~L~~~~~~~~~~~~~~~~G~F~~~~ls~e~~~~L~~e~gV~~~pg~Ris~a~~~~~~i~~la~ai~~v~ 400 (401)
T d7aata_ 321 RIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLKPEQVERLTKEFSIYMTKDGRISVAGVASSNVGYLAHAIHQVT 400 (401)
T ss_dssp HHHHHHHHHHHHHHHTTCCSCCHHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTCEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEECCCCHHHHHHHHHHCCEEECCCCEEEECCCCHHHHHHHHHHHHHHH
T ss_conf 99999999999999857988863577997589953979999999998299998897179852699888999999999974
Q ss_pred E
Q ss_conf 8
Q 002647 518 G 518 (897)
Q Consensus 518 a 518 (897)
-
T Consensus 401 k 401 (401)
T d7aata_ 401 K 401 (401)
T ss_dssp C
T ss_pred C
T ss_conf 9
|
| >d2h6fb1 a.102.4.3 (B:521-921) Protein farnesyltransferase, beta-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Terpenoid cyclases/Protein prenyltransferases family: Protein prenyltransferases domain: Protein farnesyltransferase, beta-subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=30265.24 Aligned_cols=1 Identities=0% Similarity=-0.394 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~t~ts~~q~~~e~~~~~~~~~~~~~~~~~~~~L~r~~H~~y~~~~L~~lp~~~~~lD~~r 80 (401)
T d2h6fb1 1 EPLYSLRPEHARERLQDDSVETVTSIEQAKVEEKIQEVFSSYKFNHLVPRLVLQREKHFHYLKRGLRQLTDAYECLDASR 80 (401)
T ss_dssp CCCGGGSGGGGGGSCCCTTCCCHHHHHHHHHHHHHHHHHHTTCBTTBCCCCCCCHHHHHHHHHHHTTEECGGGGGGTTCH
T ss_pred CCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCC
T ss_conf 97345467664331468898637889999999999999987534037865532599999999999986988760625462
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~l~yw~l~~L~LL~~~~~~~~~~~ii~~l~~~q~~~GGF~g~pg~~~hla~Ty~Al~~L~ilg~~~~~~~idR~~i~~f 160 (401)
T d2h6fb1 81 PWLCYWILHSLELLDEPIPQIVATDVCQFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQY 160 (401)
T ss_dssp HHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHBCTTSSBBSSTTCCBCHHHHHHHHHHHHHHCCHHHHTTSCHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
T ss_conf 99999999999985998538999999999999718999968999987433999999999997177521023339999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 L~slQ~pDGsF~~~~~ge~D~R~~Y~Av~i~~lL~~~~~~~~~~~~~~I~scQ~~dGGfg~~pg~EaHgg~TfCalAaL~ 240 (401)
T d2h6fb1 161 LYSLKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCGLAALV 240 (401)
T ss_dssp HHTTBCTTSCBBSSTTCCBSHHHHHHHHHHHHHTTCCCTTTTTTHHHHHHHHBCTTSSBCSSTTSCCCHHHHHHHHHHHH
T ss_pred HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99951888980002367766212699999999958997778999999999806888874578788763539899999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 lL~~~~~~d~~~l~~WL~~RQ~~~eGGF~GR~nKlvD~CYSfW~ga~l~lL~~~~~~~~~~~~~~~~~l~d~~~l~~yiL 320 (401)
T d2h6fb1 241 ILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHRALHAQGDPALSMSHWMFHQQALQEYIL 320 (401)
T ss_dssp HHTCGGGSCHHHHHHHHHHTBCTTTCSBBSSTTSCBCTTHHHHTTTHHHHHHHHHHHTTCTTCCSSCCSSCHHHHHHHHH
T ss_pred HHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 84788645899999999973778778437887887635788899889999999861246631113333437999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~Q~~~GGf~d~Pg~~pD~yHT~y~L~gLSl~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~i~~~~~~~~~~~f~~~p~ 400 (401)
T d2h6fb1 321 MCCQCPAGGLLDKPGKSRDFYHTCYCLSGLSIAQHFGSGAMLHDVVLGVPENALQPTHPVYNIGPDKVIQATTYFLQKPV 400 (401)
T ss_dssp HHSBCTTSCBCSSTTSCCCHHHHHHHHHHHHHHHEEEETTEEEECCCSSGGGCCCCCCTTTSSCHHHHHHHHHHHHTSCC
T ss_pred HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 97478999948897899870088899999986577676676643235775346633798615889999999999985899
Q ss_pred E
Q ss_conf 8
Q 002647 518 G 518 (897)
Q Consensus 518 a 518 (897)
-
T Consensus 401 ~ 401 (401)
T d2h6fb1 401 P 401 (401)
T ss_dssp T
T ss_pred C
T ss_conf 9
|
| >d2r7da2 b.40.4.16 (A:3-403) Ribonuclease II family protein DR0020 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: OB-fold superfamily: Nucleic acid-binding proteins family: RNB domain-like domain: Ribonuclease II family protein DR0020 species: Deinococcus radiodurans [TaxId: 1299]
Probab=100.00 E-value=0 Score=30262.26 Aligned_cols=1 Identities=0% Similarity=-0.028 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~p~~~~~~~v~ve~~~~~~~~~~~i~~~lg~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~ 80 (401)
T d2r7da2 1 QPELTPAQRTEVELLARGRADKSRVLRDLKLPETPEAAHALLLRLGVWDEARTPYADRLRAALNAVELPVPDFDPAEERL 80 (401)
T ss_dssp CCCCCHHHHHHHHHHHTTSCSCCHHHHHTTCCCSHHHHHHHHHHHTSSCTTCCCHHHHTTCCCSCCCCCCCCCCTTSCCE
T ss_pred CCCCCCCCEEEEEECCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 99899888899998123899973124522999996569999998199865566780999999863267888743334661
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 Dlr~l~~~tID~~~a~D~DDAisie~~~~g~~~l~VHIADVs~~v~~~s~Ld~eA~~R~tSvYlp~~~~pMLP~~ls~~~ 160 (401)
T d2r7da2 81 DLTHLPTFAIDDEGNQDPDDAVGVEDLGGGLTRLWVHVADVAALVAPDSPLDLEARARGATLYLPDRTIGMLPDELVAKA 160 (401)
T ss_dssp ECTTSCEEEEECTTCCCCCEEEEEEECSTTCEEEEEEEECGGGTCCTTSHHHHHHHHHCBCEECSSCEECSSCHHHHHHH
T ss_pred CCCCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEECCHHHHCCCCCHHHHHHHHHCCCCCCCCCEEECCCHHHHCCC
T ss_conf 52028679988998864421036787479968999961356662067776899999858464089972423758874132
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 SL~~~~~r~als~~~~ld~~g~i~~~~~~~s~I~~~~ltY~~v~~~~~~~~~~l~~l~~~~~~l~~~R~~~gal~~~~~~ 240 (401)
T d2r7da2 161 GLGLHEVSPALSICLDLDPDGNAEAVDVLLTRVKVQRLAYQEAQARLEAGEEPFVTLARLARASRRLREGEGALSIDLPE 240 (401)
T ss_dssp STTSSSSEEEEEEEEEECTTSCEEEEEEEEEEECEEEEEHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHTTCCCCCCCC
T ss_pred CCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 24567566541147887267872332488878998301277899886314136788888999999999866884335654
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~d~~~~~~~~~~~~~s~~lVeE~MilAN~~~A~~l~~~~~p~iyR~~~~p~~~~~~~~l~~~~~~~~~~~~a~ys~ 320 (401)
T d2r7da2 241 VRVKADETGASVFPLPKPEMRTVVQECMTLAGWGTAIFADDNEIPLPFATQDYPTREVAGDTLPAMWARRKTLARTRFQP 320 (401)
T ss_dssp EEEEEETTEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEECCCSSCCCCCSHHHHHHHHHHCCCEEEES
T ss_pred CEEEECCCCCCCCEEECCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCEEEECC
T ss_conf 20221367751002541312456676765301548999864368753103678824432110788887640044006758
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 321 ~~~~H~gLgl~~YthfTSPIRRY~DLivhrqL~a~L~~~~~~~~~~l~~~~~~~~~~~~~~~~~er~~~~~~~~~yl~~~ 400 (401)
T d2r7da2 321 SPGPHHGMGLDLYAQATSPMRRYLDLVVHQQLRAFLAGRDPLSSKVMAAHIAESQMNADATRQAERLSRRHHTLRFIAAQ 400 (401)
T ss_dssp SCCCBTTTTBSCCCCCSCTTTBHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 98867110678606269725405789999999999769999999999999999999999999999999999999999859
Q ss_pred E
Q ss_conf 8
Q 002647 518 G 518 (897)
Q Consensus 518 a 518 (897)
=
T Consensus 401 p 401 (401)
T d2r7da2 401 P 401 (401)
T ss_dssp T
T ss_pred C
T ss_conf 2
|
| >d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: G proteins domain: Interferon-inducible GTPase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=0 Score=30188.41 Aligned_cols=1 Identities=0% Similarity=0.238 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~dl~ss~~~~~~~~~~~~~~l~~e~~~~i~~~~~~~~~~~~~~~i~~~l~~~~~~~l~Iai~G~~n~GKSSLiNaL~G~~ 80 (400)
T d1tq4a_ 1 NDLPSSFTGYFKKFNTGRKIISQEILNLIELRMRAGNIQLTNSAISDALKEIDSSVLNVAVTGETGSGKSSFINTLRGIG 80 (400)
T ss_dssp CCHHHHHHHHHTTSCGGGCSSCHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHCCEEEEEEECTTSSHHHHHHHHHTCC
T ss_pred CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 96178899999877654004409899999998861777989999999997443677179998999997899999995888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~g~~~tT~~~~~~~~~~~~~~~l~DtPG~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~d~~l~~~l~~ 160 (400)
T d1tq4a_ 81 NEEEGAAKTGVVEVTMERHPYKHPNIPNVVFWDLPGIGSTNFPPDTYLEKMKFYEYDFFIIISATRFKKNDIDIAKAISM 160 (400)
T ss_dssp TTSTTSCCCCC----CCCEEEECSSCTTEEEEECCCGGGSSCCHHHHHHHTTGGGCSEEEEEESSCCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 67775678999887044553110689707998379854333449999987433226599996588887889999999997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~k~~~~V~nK~D~~~~~~~~~~~~~~~~e~~l~~ir~~~~~~l~~~~~~~~~vflvS~~~~~~~d~~~L~~~l~~~L~~ 240 (400)
T d1tq4a_ 161 MKKEFYFVRTKVDSDITNEADGEPQTFDKEKVLQDIRLNCVNTFRENGIAEPPIFLLSNKNVCHYDFPVLMDKLISDLPI 240 (400)
T ss_dssp TTCEEEEEECCHHHHHHHHHTTCCTTCCHHHHHHHHHHHHHHHHHHTTCSSCCEEECCTTCTTSTTHHHHHHHHHHHSCG
T ss_pred CCCCEEEEEECCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 69987999708632101354322011227889999999999999874899897797337764515899999999998399
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~l~~~~~~~i~~K~~~~~~~i~~~a~~a~~~~~iP~p~~~~~~d~~~l~~~l~~y~~~fGlD~~sL~~lA~~ 320 (400)
T d1tq4a_ 241 YKRHNFMVSLPNITDSVIEKKRQFLKQRIWLEGFAADLVNIIPSLTFLLDSDLETLKKSMKFYRTVFGVDETSLQRLARD 320 (400)
T ss_dssp GGHHHHHHHSCCCSHHHHHHHHHHHHHHHHHHHHHTCCBSSCTTSSCCCHHHHHHHHHHHHHHHHHTTCSHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 99999998516657999999899999999999999734246886303201329999999999999809998999999999
Q ss_pred -------------------------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~lka~iks~~~~~~~~~~~i~~~l~k~~~~~~~~~G~~~a~~~~f~~~~~l~~~~l~~~aedak~~l~~~~~~n 400 (400)
T d1tq4a_ 321 WEIEVDQVEAMIKSPAVFKPTDEETIQERLSRYIQEFCLANGYLLPKNSFLKEIFYLKYYFLDMVTEDAKTLLKEICLRN 400 (400)
T ss_dssp SSSCHHHHHHTCSHHHHTSSCCHHHHHHHHHHHHHHHHHHHCCSSSTTCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 29989999999708366555567899999999887883052389999999999999999999999999999999986559
|
| >d3ovwa_ b.29.1.10 (A:) Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) {Fusarium oxysporum [TaxId: 5507]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Concanavalin A-like lectins/glucanases superfamily: Concanavalin A-like lectins/glucanases family: Glycosyl hydrolase family 7 catalytic core domain: Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) species: Fusarium oxysporum [TaxId: 5507]
Probab=100.00 E-value=0 Score=30188.39 Aligned_cols=1 Identities=0% Similarity=-0.958 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 q~~~~t~E~HP~ltwq~CT~~ggCt~~~g~vV~D~nwrw~h~~~g~~~c~~gn~w~~~lCpd~~tCa~nC~ldGad~~~y 80 (400)
T d3ovwa_ 1 ETPDKAKEQHPKLETYRCTKASGCKKQTNYIVADAGIHGIRQKNGAGCGDWGQKPNATACPDEASCAKNCILSGMDSNAY 80 (400)
T ss_dssp CEECSSCCCCCEEEEEEEETTTEEEEEEEEEEECHHHHCEECTTSCBSCCTTSCCCTTTCSSHHHHHHHCEECCCCHHHH
T ss_pred CCCCCCCCCCCCCEEEEECCCCCCEECCCEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC
T ss_conf 98887676588523265058998586233499824733244058973234388565344887566676435237664555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~GVttsG~sLtl~~vt~~~~vGsRvYLl~~d~~~Yqmf~Llg~EfTFdVD~S~lpCGlNgALYfveM~adGg~s~~~~ 160 (400)
T d3ovwa_ 81 KNAGITTSGNKLRLQQLINNQLVSPRVYLLEENKKKYEMLHLTGTEFSFDVEMEKLPCGMNGALYLSEMPQDGGKSTSRN 160 (400)
T ss_dssp HHTTEEEETTEEEEESEETTEECCCEEEEECTTSSSBCEECCTTCEEEEEEECTTCCTTEEEEEEEECCCTTTTGGGCTT
T ss_pred CCEEEEECCCCEEEEEEECCCCCCCEEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCC
T ss_conf 40569953881899857548832621899757877357899338678888633568764322565662167778666788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 n~aGAkYGtGYCDAQC~d~kfInG~aNv~g~GsCC~EmDIwEANs~a~a~TpH~C~~~g~~~C~g~~Cg~~g~CD~~GC~ 240 (400)
T d3ovwa_ 161 SKAGAYYGAGYCDAQCYVTPFINGVGNIKGQGVCCNELDIWEANSRATHIAPHPCSKPGLYGCTGDECGSSGICDKAGCG 240 (400)
T ss_dssp CCCTGGGTCCCCBTTCCBCSEETTEECTTCCEEECCEEEEEEECSSCEEEEEECBSSCSCEEECGGGGSTTSSBCSSCCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC
T ss_conf 76666367722113156243205621346655555641101110455320688656787336457767888860888867
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 fNpYR~g~~~FyG~G~~~tVDT~k~fTVVTQF~~~~~G~L~eIrR~YVQ~GkvI~n~~~~~~g~~~~~sit~~fC~~~~~ 320 (400)
T d3ovwa_ 241 WNHNRINVTDFYGRGKQYKVDSTRKFTVTSQFVANKQGDLIELHRHYIQDNKVIESAVVNISGPPKINFINDKYCAATGA 320 (400)
T ss_dssp BCGGGGTCTTSEESSTTSSEETTSCEEEEEEEEECTTSCEEEEEEEEEETTEEEECCCCCSSSSCSCSSBCHHHHHHTTC
T ss_pred CCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCCEEEEEEEEEECCEEECCCCCCCCCCCCCCCCCHHHHCCCCC
T ss_conf 67433488754878987142379973899788708985368998999609999668875677887677346677546786
Q ss_pred -------------------------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------------------------a 518 (897)
+
T Consensus 321 ~~f~~~GGl~~mg~al~rGmVLv~SlWdd~~~~M~WLDsg~~GpC~~tsg~p~~ve~~~p~a~Vt~SNIKfG~I~STy~~ 400 (400)
T d3ovwa_ 321 NEYMRLGGTKQMGDAMSRGMVLAMSVWWSEGDFMAWLDQGVAGPCDATEGDPKNIVKVQPNPEVTFSNIRIGEIGSTSSV 400 (400)
T ss_dssp HHHHHTTHHHHHHHHHHHCEEEEEEEEECTTTTTHHHHBTTSCSBCSSTTSHHHHHHHCSSCEEEEEEEEEESTTCSCCC
T ss_pred CHHHHCCCHHHHHHHHCCCEEEEEEEEECCCCCCEECCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEECEECCCCCCCCC
T ss_conf 42443476889888850886999986847999866204898878888888855651328997799860768577763119
|
| >d1ru4a_ b.80.1.9 (A:) Pectate transeliminase {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Single-stranded right-handed beta-helix superfamily: Pectin lyase-like family: Pectate transeliminase domain: Pectate transeliminase species: Erwinia chrysanthemi [TaxId: 556]
Probab=100.00 E-value=0 Score=30187.36 Aligned_cols=1 Identities=0% Similarity=-0.061 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~YVs~~Gsd~~~Gs~~~p~~tIq~Ai~~a~~GDtI~v~~GtY~~~~~~~~~~~~~~~~~G~~~~ 80 (400)
T d1ru4a_ 1 ADCSSDLTSGISTKRIYYVAPNGNSSNNGSSFNAPMSFSAAMAAVNPGELILLKPGTYTIPYTQGKGNTITFNKSGKDGA 80 (400)
T ss_dssp CCCTTCTTTTCCCSCEEEECTTCCTTCCSSSTTSCBCHHHHHHHCCTTCEEEECSEEEECCCBTTBCCCEEECCCCBTTB
T ss_pred CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCEEECCEEECCCEEEEEECCCCCCC
T ss_conf 97532000564447769997998679998722447889999983899599998695516651205753899723777897
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~i~i~~~~~~~~vi~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~n~~i~~~~~~g~~~~~~~ 160 (400)
T d1ru4a_ 81 PIYVAAANCGRAVFDFSFPDSQWVQASYGFYVTGDYWYFKGVEVTRAGYQGAYVIGSHNTFENTAFHHNRNTGLEINNGG 160 (400)
T ss_dssp CEEEEEGGGCCEEEECCCCTTCCCTTCCSEEECSSCEEEESEEEESCSSCSEEECSSSCEEESCEEESCSSCSEEECTTC
T ss_pred EEEEECCCCCEEEEECCCCCCCCCCCCCEEEEECCCEEEECCEEECCCCEEEEECCCCCCCCCCEEECCCCCEEEEECCC
T ss_conf 29996079972599587623343323431787447479944342067111222023421024526852775117885555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~G~~~~~~~~~~~i~nn~~~~n~~~~~~~~~~ 240 (400)
T d1ru4a_ 161 SYNTVINSDAYRNYDPKKNGSMADGFGPKQKQGPGNRFVGCRAWENSDDGFDLFDSPQKVVIENSWAFRNGINYWNDSAF 240 (400)
T ss_dssp CSCEEESCEEECCCCTTTTTSSCCSEEECTTCCSCCEEESCEEESCSSCSEECTTCCSCCEEESCEEESTTCCCSCCTTC
T ss_pred CCCEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEECCEEEECCCCCEEEEECCCCEEEECEEEECCCCCCCCCCCC
T ss_conf 42179974677134565442222024689612566166433566426766368824898799775998654101456430
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~n~~~~n~~~g~~~~~~~~~~~i~nN~~~~n~~~~~~~~~~~~~~~~~~~nN~~~~~~~ 320 (400)
T d1ru4a_ 241 AGNGNGFKLGGNQAVGNHRITRSVAFGNVSKGFDQNNNAGGVTVINNTSYKNGINYGFGSNVQSGQKHYFRNNVSLSASV 320 (400)
T ss_dssp CCCCCSEECCCTTCCCCCEEESCEEESCSSEEEECTTCSSCCEEESCEEESSSEEEEECSCCCTTCCEEEESCEEESSCE
T ss_pred CCCCCEEECCCCCCCCCEEEEEEEEECCCCCCEEECCCCCCCCEECCEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCE
T ss_conf 01373365047776665589877886366553040357664112265687255430343223567650798328834740
Q ss_pred -------------------------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~Spai~aG~~~~~~~~~G~~pDiGAyE~~ 400 (400)
T d1ru4a_ 321 TVSNADAKSNSWDTGPAASASDFVSLDTSLATVSRDNDGTLPETSLFRLSANSKLINAGTKESNISYSGSAPDLGAFERN 400 (400)
T ss_dssp EECSEEEESSTTTTSCCCCGGGBSBCCGGGGGCCCCTTCCCCCCSBTCBCTTCTTTTCSCCCTTCCCSTTSCCSSSCCCC
T ss_pred EEECCCCCCCEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 34134323522546730147761674643244656777767768884378998100487877788989986776777588
|
| >d1inpa_ e.7.1.1 (A:) Inositol polyphosphate 1-phosphatase {Cow (Bos taurus), brain [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Carbohydrate phosphatase superfamily: Carbohydrate phosphatase family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like domain: Inositol polyphosphate 1-phosphatase species: Cow (Bos taurus), brain [TaxId: 9913]
Probab=100.00 E-value=0 Score=30185.19 Aligned_cols=1 Identities=0% Similarity=-0.925 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~l~~~l~~aekAa~iar~~~~~~~l~~~~v~ek~~~~~~~k~~~D~VT~AD~~aq~~I~~~L~~~fP~~~~~IvGEE 80 (400)
T d1inpa_ 1 MSDILQELLRVSEKAANIARACRQQETLFQLLIEEKKEGEKNKKFAVDFKTLADVLVQEVIKENMENKFPGLGKKIFGEE 80 (400)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHSHHHHTCCCCSCCCCTTTTCCCCHHHHHHHHHHHHHHHHHHHHHSTTGGGGEEESS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCC
T ss_conf 96899999999999999999998501687767643136534626799984189999999999999987869999988158
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~IDPIDGT~~ 160 (400)
T d1inpa_ 81 SNELTNDLGEKIIMRLGPTEEETVALLSKVLNGNKLASEALAKVVHQDVFFSDPALDSVEINIPQDILGIWVDPIDSTYQ 160 (400)
T ss_dssp CSEEECTTSCEEECCCCSSCSCHHHHHHHHTTTCTTHHHHHHHHHTCCCCCCCSSSSSCCCCCCGGGEEEEEEEEECHHH
T ss_pred CCCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCEEEEECCCCCHH
T ss_conf 88654544311122024136666666543114542023342023231100011001232356787656299952758420
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 Fi~G~~~~~v~iaL~~~~~~~v~vlI~lal~~~G~Pv~GvI~~P~~~~~~~~~~~~G~~~~a~~g~Ga~~~~~~~~~~~~ 240 (400)
T d1inpa_ 161 YIKGSADITPNQGIFPSGLQCVTVLIGVYDIQTGVPLMGVINQPFVSQDLHTRRWKGQCYWGLSYLGTNIHSLLPPVSTR 240 (400)
T ss_dssp HHHCCCCCCCBTTBCSSSGGGCEEEEEEEETTTCCEEEEEEEEEEEEECTTTCCEEEEEEEEEESSSEEECCSCCTTSST
T ss_pred HCCCCCCCEEEEEHHCCCCCCCEEEEEEHHEECCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
T ss_conf 12699643255500126665313565201007897898475455446400023678428997437673236766665544
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~~g~a~~k~~~VA~G~~D~yl~~~~~~~~WD~aA 320 (400)
T d1inpa_ 241 SNSEAQSQGTQNPSSEGSCRFSVVISTSEKETIKGALSHVCGERIFRAAGAGYKSLCVILGLADIYIFSEDTTFKWDSCA 320 (400)
T ss_dssp TTSSCSSCCCCBTTBTTSSSSCCEEEECTTCCSCCCCTTTTCCEEEECCCHHHHHHHHHHTSCSEEEECSSCCBHHHHHH
T ss_pred CCCCCCCEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHH
T ss_conf 44322201025675333454047850345389999999747954997558899999996899888995578998788799
Q ss_pred -------------------------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------------------------a 518 (897)
.
T Consensus 321 g~~Il~eaGG~VtD~~G~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~N~~giIA~~~~~~h~~~l~~l~~~l~~~~~~~ 400 (400)
T d1inpa_ 321 AHAILRAMGGGMVDLKECLERNPDTGLDLPQLVYHVGNEGAAGVDQWANKGGLIAYRSEKQLETFLSRLLQHLAPVATHT 400 (400)
T ss_dssp HHHHHHTTTCEEEEHHHHHHSCTTSSCSTTBCCSSCCSTTTTTTCTTBCTTCEEEESCHHHHHHHTCCCTTTCCCCSCCC
T ss_pred HHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999978997987999962466544445210014443223553101556878997888999999999997633546789
|
| >d2olua2 e.3.1.1 (A:293-692) Penicillin-binding protein 2, PBP2 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: Penicillin-binding protein 2, PBP2 species: Staphylococcus aureus [TaxId: 1280]
Probab=100.00 E-value=0 Score=30181.79 Aligned_cols=1 Identities=0% Similarity=-0.527 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~y~~~~d~v~~~l~~~~~~~~~~~~~~~~~G~~I~TTlD~~lQ~~ae~~l~~~~~~~~~~~~~a~vvvd~~TG~I 80 (400)
T d2olua2 1 TNQDSEYNSYVNFVKSELMNNKAFKDENLGNVLQSGIKIYTNMDKDVQKTLQNDVDNGSFYKNKDQQVGATILDSKTGGL 80 (400)
T ss_dssp CCCSGGGHHHHHHHHHHHTTSTTTTTSCHHHHTTBCCEEEECCCHHHHHHHHHHHHHCSCCSSTTEEEEEEEEETTTCBE
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCE
T ss_conf 99877557999999999986128766567786679988995889999999999998534214867528999998899959
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 lAm~~~~~y~~~~~~n~~~~~~~pGStfKp~v~~aaale~g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~G~v~l~~Al~ 160 (400)
T d2olua2 81 VAISGGRDFKDVVNRNQATDPHPTGSSLKPFLAYGPAIENMKWATNHAIQDESSYQVDGSTFRNYDTKSHGTVSIYDALR 160 (400)
T ss_dssp EEEECSTTCCTTTSCCTTTSCEECGGGGHHHHTHHHHHHHTCCCTTBEEECCSSEEETTEEECCTTSCCCCEEEHHHHHH
T ss_pred EEEEECCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99997888883233321000003666556178899986458721110013334421111013366655553334322355
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~S~N~~~v~l~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~lg~g~~~vtplqlA~aya~iANgG~~~~P~~v~~i~~ 240 (400)
T d2olua2 161 QSFNIPALKAWQSVKQNAGNDAPKKFAAKLGLNYEGDIGPSEVLGGSASEFSPTQLASAFAAIANGGTYNNAHSIQKVVT 240 (400)
T ss_dssp TTCHHHHHHHHHHHHHHTCTTHHHHHHHHTTCCCSSCCCHHHHTTCTTCEECHHHHHHHHHHHHTTSEEECCBCEEEEEC
T ss_pred CCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEECCCEEEEEEECCCCCC
T ss_conf 66511123200010024567889999987088731121100000123456778886400100005964787674011356
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~g~~v~~~~~~~~v~s~~~a~~l~~~l~~vv~~~Gt~~~~~~~g~~vagKTGTa~~~~~~~~~~~~~~~~~~daWFvG~ 320 (400)
T d2olua2 241 RDGETIEYDHTSHKAMSDYTAYMLAEMLKGTFKPYGSAYGHGVSGVNMGAKTGTGTYGAETYSQYNLPDNAAKDVWINGF 320 (400)
T ss_dssp TTSCEEECCCCEEECSCHHHHHHHHHHHHGGGSTTSTTTTCCCSSCCCEEEEEEECCCHHHHHHTTCCTTEESEEEEEEE
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEE
T ss_conf 43232222222222113789999976521433541000111357814777611144576576544566687640799983
Q ss_pred -------------------------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~P~~~~~VwvG~d~~~~~~~~~~~~~~~~~~~a~i~~~~m~~~~~~~~~~f~~P~~v~~~~p~~~~~~~~~~~~~~~~~~ 400 (400)
T d2olua2 321 TPQYTMSVWMGFSKVKQYGENSFVGHSQQEYPQFLYENVMSKISSRDGEDFKRPSSVSGSIPSINVSGSQDNNTTNRSTH 400 (400)
T ss_dssp CSSEEEEEEEEESSCCGGGTTSEESHHHHTHHHHHHHHHHHHHSCCSCCCCCCCTTEESCTTCCEETTCCCSSBCCCCCC
T ss_pred CCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 69969999984688875676765676433579999999999975689666999998766777554789999998888889
|
| >d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Glycosyltrehalose trehalohydrolase, central domain species: Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]
Probab=100.00 E-value=0 Score=30184.78 Aligned_cols=1 Identities=0% Similarity=-0.892 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~~~~viYe~~v~~f~~~Gd~~gi~~~ldyi~~LGv~~i~l~Pv~~~~~~~~~GY~~~d~~~vd~~~Gt~~dl 80 (400)
T d1eh9a3 1 FNNETFLKKEDLIIYEIHVGTFTPEGTFEGVIRKLDYLKDLGITAIEIMPIAQFPGKRDWGYDGVYLYAVQNSYGGPEGF 80 (400)
T ss_dssp CCSCCSCCSSSCCEEEECTTTSSSSCSHHHHHHTHHHHHHHTCCEEEECCCBCCSSSCCCSTTCCCTTCBCSTTCCHHHH
T ss_pred CCCCCCCCCCCEEEEEEEHHHHCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 99877688768599998312307899999999875899975998899687676889999997877778858221999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 k~lv~~~h~~gi~VilD~V~NH~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~v~~~l~d~~~~Wl~~~gvDGfR 160 (400)
T d1eh9a3 81 RKLVDEAHKKGLGVILDVVYNHVGPEGNYMVKLGPYFSQKYKTPWGLTFNFDDAESDEVRKFILENVEYWIKEYNVDGFR 160 (400)
T ss_dssp HHHHHHHHHTTCEEEEEECCSCCCSSSCCHHHHSCCSCSSCCCSSSCCCCSSSTTHHHHHHHHHHHHHHHHHHSCCCCEE
T ss_pred HHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 99999997637713542244642577850443100211234545564435565556079999999999887524663688
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~Daa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (400)
T d1eh9a3 161 LDAVHAIIDTSPKHILEEIADVVHKYNRIVIAESDLNDPRVVNPKEKCGYNIDAQWVDDFHHSIHAYLTGERQGYYTDFG 240 (400)
T ss_dssp ETTGGGCCCCSSSCHHHHHHHHHHHTTCCEEECCCSCCTTTTSCGGGTCCCCSEEECHHHHHHHHHHHSCCCSGGGGGCC
T ss_pred EECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCEECCCCCCCCCHHHHHHHCCCCCCHHHHHH
T ss_conf 60434415114565589999987533222110100468442564553352000212665310467665033210145444
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~nHD~~~~~~~~~~~~~~~~~~~~~~a~a~~l~~pGi 320 (400)
T d1eh9a3 241 NLDDIVKSYKDVFVYDGKYSNFRRKTHGEPVGELDGCNFVVYIQNHDQVGNRGKGERIIKLVDRESYKIAAALYLLSPYI 320 (400)
T ss_dssp SHHHHHHHHHSSCSCSSEEETTTTEEECCCCCSCCGGGEECCSCCHHHHHTTTTCCCGGGGSCHHHHHHHHHHHHSSSSC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 35789987543211221478999874465233304400443122046553356401267776656778999999848997
Q ss_pred -------------------------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------------------------a 518 (897)
+
T Consensus 321 P~iy~G~E~G~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~lRk~~pv~ 400 (400)
T d1eh9a3 321 PMIFMGEEYGEENPFYFFSDFSDSKLIQGVREGRKKENGQDTDPQDESTFNASKLSWKIDEEIFSFYKILIKMRKELSIA 400 (400)
T ss_dssp CEEESSGGGTCCCCCCCCCCCCSTTHHHHHHHHHHHHTCCCSCTTSHHHHHTTSCCCCCCHHHHHHHHHHHHHHHHHTCS
T ss_pred CEEECCHHHCCCCCCCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
T ss_conf 78977853288898875010266877666676405766789876552346556677657899999999999999678699
|
| >d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cyp158a2 species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=0 Score=30111.30 Aligned_cols=1 Identities=0% Similarity=0.670 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~p~~~~~~~~~~~~~~~~p~~~~lr~~gPv~~~~~~~g~~~~wvvt~~e~v~~vl~d~~~~~~~~~~~~~~~~~~~~~ 80 (399)
T d1s1fa_ 1 QAVPPVRDWPAVDLPGSDFDPVLTELMREGPVTRISLPNGEGWAWLVTRHDDVRLVTNDPRFGREAVMDRQVTRLAPHFI 80 (399)
T ss_dssp CCSCCEEECCCCCCCTTCCCHHHHHHHHHCSEEEEECSBSBSCEEEECSHHHHHHHHTCTTEESTTTTTTTBCBSSSSCS
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99899899887789999989999999971996898416886588996599999999769764456555555444561001
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~Dg~~H~~~Rr~l~~~Fs~~~l~~~~~~i~~~~~~l~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~~~~~ 160 (399)
T d1s1fa_ 81 PARGAVGFLDPPDHTRLRRSVAAAFTARGVERVRERSRGMLDELVDAMLRAGPPADLTEAVLSPFPIAVICELMGVPATD 160 (399)
T ss_dssp SCTTSGGGCCTTHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHCSSEEHHHHTTTHHHHHHHHHHHTCCGGG
T ss_pred CCCCCHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHEEHHCCCCCHHH
T ss_conf 33452010586778999987484347412678999999999998620234565032024554433430001104883455
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ag~~tT~ 240 (399)
T d1s1fa_ 161 RHSMHTWTQLILSSSHGAEVSERAKNEMNAYFSDLIGLRSDSAGEDVTSLLGAAVGRDEITLSEAVGLAVLLQIGGEAVT 240 (399)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCHHHHTHHHHHHHHHHHTSCCSCCCSHHHHHHHHHHTTSSCHHHHHHHHHHHHHHTTHHH
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
T ss_conf 44566677887512232046788888899999999987630223201232001256655507777777888751342222
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~l~~~l~~l~~~p~~~~~~~~~~~~~~~~~~e~~r~~p~~~~~~~~R~~~~~~~l~G~~ip~Gt~V~~~~~~~~rdp~~ 320 (399)
T d1s1fa_ 241 NNSGQMFHLLLSRPELAERLRSEPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEV 320 (399)
T ss_dssp HHHHHHHHHHHHSHHHHHHHHHCGGGHHHHHHHHHHHSCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTT
T ss_pred CCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEECCCCEECCCCCCCCCCHHH
T ss_conf 20222122343085155431232013532122211246632223432100002540533533897501233334668110
Q ss_pred ------------------------------------------------------------------------------E
Q ss_conf ------------------------------------------------------------------------------8
Q 002647 518 ------------------------------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------------------------------a 518 (897)
|
T Consensus 321 ~~dP~~F~PeR~~~~~lpFG~G~r~C~G~~lA~~e~~~~l~~Ll~rf~~~~~~~~~~~~~~~~~~~~rg~~~lpv~~~~ 399 (399)
T d1s1fa_ 321 FPDPDRIDFERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPEDVPFKKGALIRGPEALPVTWHA 399 (399)
T ss_dssp SSSTTSCCTTC--CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGSCBCSSCSBCCBSCCEEECCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEECCCCCCCCEEEEEEEEC
T ss_conf 6995444889999997777988617815999999999999999997798788889666525168744287047899849
|
| >d1oyaa_ c.1.4.1 (A:) Old yellow enzyme (OYE) {Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: FMN-linked oxidoreductases family: FMN-linked oxidoreductases domain: Old yellow enzyme (OYE) species: Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]
Probab=100.00 E-value=0 Score=30110.88 Aligned_cols=1 Identities=0% Similarity=-0.426 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~p~~~~~~~LFsP~~Ig~~~lkNRiv~apm~~~~a~~~G~~~~~d~~i~yy~~rA~GG~GlIi~e~~~V~~~g~ 80 (399)
T d1oyaa_ 1 SFVKDFKPQALGDTNLFKPIKIGNNELLHRAVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFISPQAG 80 (399)
T ss_dssp CBCTTCCCCCCTTSGGGSCEEETTEEESSSEEBCCCCCCCCBTTTTBCCTTTHHHHHHHHTCSTTCEEEEEEEESSGGGC
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCEEECCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCEEECCCCC
T ss_conf 97455888889999999973289988637668777667757899897987999999999972890799964377776547
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~l~~d~~i~~~k~l~~~vh~~Ga~i~~QL~H~Gr~~~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~~~~~~p~~ 160 (399)
T d1oyaa_ 81 GYDNAPGVWSEEQMVEWTKIFNAIHEKKSFVWVQLWVLGWAAFPDNLARDGLRYDSASDNVFMDAEQEAKAKKANNPQHS 160 (399)
T ss_dssp CCTTSCBSSSHHHHHHHHHHHHHHHHTTCEEEEEEECCGGGSCHHHHHHTTCCEEESCSSCCSCHHHHHHHHHTTCCEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 78998745787998888699999975201221233220234574211334445667543566777777666567887520
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 mt~~eI~~ii~~f~~AA~rA~~AGfDgVEIH~aHGYLl~qFLSp~tN~RtDeYGGSlENR~Rf~~Eii~aIR~~vg~~~I 240 (399)
T d1oyaa_ 161 LTKDEIKQYIKEYVQAAKNSIAAGADGVEIHSANGYLLNQFLDPHSNTRTDEYGGSIENRARFTLEVVDALVEAIGHEKV 240 (399)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCC
T ss_conf 15677888888999999999980975676124377789986413035665224765665457799998754340222574
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 gvRls~~d~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~~~~PV 320 (399)
T d1oyaa_ 241 GLRLSPYGVFNSMSGGAETGIVAQYAYVAGELEKRAKAGKRLAFVHLVEPRVTNPFLTEGEGEYEGGSNDFVYSIWKGPV 320 (399)
T ss_dssp EEEECTTCCTTTCCGGGSTTHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTCSCTTSCTTSSCCCSCCTTHHHHHCCSCE
T ss_pred EEEECHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCE
T ss_conf 47853022025667741000577899999889874324543441122146677755454432111268999999829988
Q ss_pred ------------------------------------------------------------------------------E
Q ss_conf ------------------------------------------------------------------------------8
Q 002647 518 ------------------------------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------------------------------a 518 (897)
-
T Consensus 321 i~~G~i~~~~~~~~~i~~~~aDlV~~gR~liaDP~l~~K~~~G~~ln~~d~~~~~~~~~~gyt~~p~~~~~~~~~~~~~ 399 (399)
T d1oyaa_ 321 IRAGNFALHPEVVREEVKDKRTLIGYGRFFISNPDLVDRLEKGLPLNKYDRDTFYQMSAHGYIDYPTYEEALKLGWDKK 399 (399)
T ss_dssp EEESSCTTCHHHHHHHTTSTTEEEECCHHHHHCTTHHHHHHHTCCCBCCCGGGSSCSSSTTTTCCCCHHHHHHTTSSCC
T ss_pred EEECCCCCHHHHHHHHHCCCCEEHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHCCCCCC
T ss_conf 9978989869999999759981848879999791299999729998999653267899988084845499997489999
|
| >d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cytochrome P450-NOR, nitric reductase species: Fungus (Fusarium oxysporum) [TaxId: 5507]
Probab=100.00 E-value=0 Score=30109.11 Aligned_cols=1 Identities=0% Similarity=-1.922 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~p~~~~~~~dP~~~~~~Lr~~gPv~~~~~~~g~~~~vvt~~~dv~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (399)
T d1jfba_ 1 APSFPFSRASGPEPPAEFAKLRATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELSASGKQAAKAKP 80 (399)
T ss_dssp CCBSSCCCSSTTSCCTHHHHHHHHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCSHHHHHHTTSCC
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99899898766596899999996399688763789569997699999999769763547654567654544211012477
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~ 160 (399)
T d1jfba_ 81 TFVDMDPPEHMHQRSMVEPTFTPEAVKNLQPYIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPSYIIYTLLGVPFNDL 160 (399)
T ss_dssp CGGGCCTTHHHHHHTTTGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHCSTTSCEEHHHHTTTHHHHHHHHHHHTCCGGGH
T ss_pred CHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH
T ss_conf 32226869999987400764566532111026789899887454321244431024566655667788887651000036
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~~~~~~~~~~~~~~~~~~ei~~~~~~~~~ag~~tt 240 (399)
T d1jfba_ 161 EYLTQQNAIRTNGSSTAREASAANQELLDYLAILVEQRLVEPKDDIISKLCTEQVKPGNIDKSDAVQIAFLLLVAGNATM 240 (399)
T ss_dssp HHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHTTTTTSSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHH
T ss_conf 78888766531000027899999999999999999998630245544322222223577762112212334322002015
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~l~~~~~~L~~~pe~~~~L~~e~~~~~~~~~e~lr~~~~~~~~~~R~~~~~~~~~g~~ip~G~~V~~~~~~~~~dp~~ 320 (399)
T d1jfba_ 241 VNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEV 320 (399)
T ss_dssp HHHHHHHHHHHHHSHHHHHHHHHCGGGHHHHHHHHHHHSCSCCSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTT
T ss_pred HHHHHHHHHHHHHCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHH
T ss_conf 66999999998456589999741345321101101232223433333222013334577676653211114451578422
Q ss_pred ------------------------------------------------------------------------------E
Q ss_conf ------------------------------------------------------------------------------8
Q 002647 518 ------------------------------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------------------------------a 518 (897)
=
T Consensus 321 ~~dP~~F~PeR~~~~~~~lpFG~G~r~C~G~~lA~~el~~~l~~Ll~rfp~~~l~~~~~~~~~~~~~~~~g~~~lpv~~ 399 (399)
T d1jfba_ 321 FENPDEFNMNRKWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVPLGKINYTPLNRDVGIVDLPVIF 399 (399)
T ss_dssp SSSTTSCCTTCCCCSSCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCEECCTTSCSCEEECEEEC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEECCCCCCCCCCCCEEEC
T ss_conf 7996445868889999886889997368069999999999999999967967899887776467787777871351039
|
| >d2ah2a2 b.68.1.1 (A:1-399) Trypanosoma sialidase {Parasitic flagellate protozoan (Trypanosoma cruzi) [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Trypanosoma sialidase species: Parasitic flagellate protozoan (Trypanosoma cruzi) [TaxId: 5693]
Probab=100.00 E-value=0 Score=30108.81 Aligned_cols=1 Identities=0% Similarity=-0.560 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~syRIPsLv~~~GtlLA~ae~R~~~~~D~~~idiv~rRS~D~GkTWs~~ 80 (399)
T d2ah2a2 1 LAPGSSRVELFKRQSSKVPFEKDGKVTERVVHSFRLPALVNVDGVMVAIADARYETSFDNSLIDTVAKYSVDDGETWETQ 80 (399)
T ss_dssp CCTTCEEEEEECTTTCEEEEEETTEEEEEECSEEEEEEEEEETTEEEEEEEEESSCSCSSSCEEEEEEEESSTTSSCEEE
T ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEECEEEEEECCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCE
T ss_conf 98886434203788765775568988985699991308999899999999179888998720378998532788578762
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~v~~~~~~~~~~~~dP~~v~d~~~i~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~~~~~~g~tWs~p~~i~ 160 (399)
T d2ah2a2 81 IAIKNSRASSVSRVVDPTVIVKGNKLYVLVGSYNSSRSYWTSHGDARDWDILLAVGEVTKSTAGGKITASIKWGSPVSLK 160 (399)
T ss_dssp EEECCCCSSTTCEEEEEEEEEETTEEEEEEEEESSCCSCGGGCSSSTTEEEEEEEEEEEEECGGGSCEEEEEECCCEECG
T ss_pred EEEECCCCCCCCCCCCCEEEEECCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 89724777776666688599849969999997658886221125788876258977998646798366773258832056
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~g~~~gi~~~~GrLv~p~~~~~~~~~~~s~~iySdD~G~TW~~g~~~~~~~~~~~~v~~~dG~l 240 (399)
T d2ah2a2 161 EFFPAEMEGMHTNQFLGGAGVAIVASNGNLVYPVQVTNKKKQVFSKIFYSEDEGKTWKFGKGRSAFGCSEPVALEWEGKL 240 (399)
T ss_dssp GGSCSEETTEEEEEEEECSEECEECTTSCEEEEEEEEETTCCEEEEEEEESSTTSSCEECSCCCCTTCEEEEEEEETTEE
T ss_pred CCCCCCCCCCCCCEECCCCCCEEEECCCCEECCEEEECCCCCEEEEEEEECCCCCEEEECCCCCCCCCCCCCEECCCCEE
T ss_conf 53465335753100526775303304863731337534887468899995899851683465589875566300358818
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ll~~R~~~g~r~v~~S~DgG~TW~~~~~~~~~v~~~~~~~~~~~~~~~li~~~~~~~~~lLfsnp~~~~~~~~r~~l~l~ 320 (399)
T d2ah2a2 241 IINTRVDYRRRLVYESSDMGNTWLEAVGTLSRVWGPSPKSNQPGSQSSFTAVTIEGMRVMLFTHPLNFKGRWLRDRLNLW 320 (399)
T ss_dssp EEEEECTTSCCCEEEESSTTSSCEECTTTTTTCBCSSTTSCSCCCCCCEEEEEETTEEEEEEEEECCSSCTTCCBCEEEE
T ss_pred EEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEE
T ss_conf 99876278740699974898625433454433437776667874453135741389729999798886454435642899
Q ss_pred ------------------------------------------------------------------------------E
Q ss_conf ------------------------------------------------------------------------------8
Q 002647 518 ------------------------------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------------------------------a 518 (897)
+
T Consensus 321 ~Sdd~g~~w~~~~~i~~g~saYS~L~~~dg~ig~lYE~~~~~~~~i~f~rlT~el~~ik~v~~~w~~~d~~~~~~~~~~ 399 (399)
T d2ah2a2 321 LTDNQRIYNVGQVSIGDENSAYSSVLYKDDKLYCLHEINSNEVYSLVFARLVGELRIIKSVLQSWKNWDSHLSSICTPA 399 (399)
T ss_dssp EESSSCEEEEEECSCTTCBCCCEEEEEETTEEEEEEEEEETTEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred EECCCCCCCCCCEEECCCCCCCCEEEEECCEEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 8579984214722855898542576758998999998589970059983687899999999998987547874478899
|
| >d1bn8a_ b.80.1.1 (A:) Pectate lyase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Single-stranded right-handed beta-helix superfamily: Pectin lyase-like family: Pectate lyase-like domain: Pectate lyase species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=0 Score=30106.74 Aligned_cols=1 Identities=0% Similarity=-0.061 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~G~As~~~gttGG~~a~~~~v~~v~t~~el~~~l~~~~~~~P~vI~~~gti~~~~~~~~~~~~~~~~~~ 80 (399)
T d1bn8a_ 1 ADLGHQTLGSNDGWGAYSTGTTGGSKASSSNVYTVSNRNQLVSALGKETNTTPKIIYIKGTIDMNVDDNLKPLGLNDYKD 80 (399)
T ss_dssp CCGGGCCCCTTSSGGGSTTCCCTTTTCCGGGEEEECSHHHHHHHHCCTTCCSCEEEEECSEEESSBCTTCCBCCHHHHCC
T ss_pred CCCHHHCCCCCCCEEECCCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCEEEEECCEEECCCCCCCCCCCCCCCCC
T ss_conf 95211113688750504898677887787746830889999999862369986699986679425665654444454334
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~V~SNkTIiG~G~~~~i~g~gl~i~a~NVIirnl~i~ 160 (399)
T d1bn8a_ 81 PEYDLDKYLKAYDPSTWGKKEPSGTQEEARARSQKNQKARVMVDIPANTTIVGSGTNAKVVGGNFQIKSDNVIIRNIEFQ 160 (399)
T ss_dssp TTCCHHHHHHHTCHHHHCSSCCCSHHHHHHHHHHHHHHHHHEEEECSSEEEEECTTCCEEESCEEEECSEEEEEESCEEE
T ss_pred CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCEEECCEEEEECCEEEEECEEEE
T ss_conf 33353322234574342034666654322111021435522785279864984589708954579983746999592997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~DaI~i~~s~~VWIDH~t~s~~~~e~~~~~~~~~~~~~~~Dg~lDi~~gs~~VTvS~n 240 (399)
T d1bn8a_ 161 DAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHHDGQTDASNGANYITMSYN 240 (399)
T ss_dssp CCCCSSCEEETTSSSSCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGCCEETTEECCCCCCSEEEETTCEEEEEESC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEECC
T ss_conf 17466666655666556767778658986686589988660267754444544456653333451653146404995774
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~f~~h~k~~L~G~~d~~~~d~g~~~vT~hhN~f~~~~~R~Prvr~g~vHv~NNy~~n~~~~~~~~~~ya~~~~~~a~il~ 320 (399)
T d1bn8a_ 241 YYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNIVQRAPRVRFGQVHVYNNYYEGSTSSSSYPFSYAWGIGKSSKIYA 320 (399)
T ss_dssp EEEEEEECCEECCCTTCGGGTTCCCEEEESCEEEEEEECSSEESSCEEEEESCEEECCTTCSSSCCCCSEEECTTCEEEE
T ss_pred CCCCCCCEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEECCEEECCCCCCCCCCCEEECCCCCCEEEE
T ss_conf 15687524675678876434687359999327247645686303557888851767787655410002212456746999
Q ss_pred ------------------------------------------------------------------------------E
Q ss_conf ------------------------------------------------------------------------------8
Q 002647 518 ------------------------------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------------------------------a 518 (897)
-
T Consensus 321 EgN~F~~~~~~~~~~~~~~~~g~~~~~~gn~~~g~~~~~~~~~~~~~~~~~~p~y~y~~~~A~~v~~~V~a~AGAGkl~ 399 (399)
T d1bn8a_ 321 QNNVIDVPGLSAAKTISVFSGGTALYDSGTLLNGTQINASAANGLSSSVGWTPSLHGSIDASANVKSNVINQAGAGKLN 399 (399)
T ss_dssp ESCEEECTTCCSGGGEEECTTCCBCEEESCEETTEECCHHHHTTCBSCCSCCCCSCCCCCCHHHHHHHHHHHCSTTSCC
T ss_pred EEEEEECCCCCCCCEECCCCCCCEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
T ss_conf 8148878888655230102688459607847648453676676746565323456533479999998765258976159
|
| >d1qgna_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Cystathionine gamma-synthase, CGS species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00 E-value=0 Score=30039.50 Aligned_cols=1 Identities=0% Similarity=-2.054 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 m~~~~~~~~~~T~avH~G~~~~~~~~~~av~~PI~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~nPt~~~LE~~la~LE 80 (398)
T d1qgna_ 1 MKYASFLNSDGSVAIHAGERLGRGIVTDAITTPVVNTSAYFFNKTSELIDFKEKRRASFEYGRYGNPTTVVLEEKISALE 80 (398)
T ss_dssp -CCCTTCCSHHHHHHHTTTTTCCSSCCSBSSCCBCCCSBBCBSSHHHHHHHHTTSSCCCCBGGGCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEECCCCEEECCHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHH
T ss_conf 98534579976579968976898888899618830777578089899998743776796443998868999999999982
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 gg~~a~~~sSGMaAi~~~l~~l~~~Gd~iv~~~~~Yg~t~~l~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~t~~v~~E 160 (398)
T d1qgna_ 81 GAESTLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPADVGALELALNQKKVNLFFTE 160 (398)
T ss_dssp TCSEEEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSSCHHHHHHHHHHSCEEEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECC
T ss_conf 99348896486468888876303455432322221011333210343456643222442210233432103563179705
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 spsNP~l~v~Di~~ia~ia~~~g~~~vVDnT~atP~~~~Pl~~GaDiVihS~TKy~~Ghsdv~~G~v~~~~~~~~~~~~~ 240 (398)
T d1qgna_ 161 SPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQKALALGADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRNL 240 (398)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCTTTTTCSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHCCCEEEECCEEECCCCCCCHHHCCCEEEEECHHHCCCCCCEEEHHHCCHHHHHHHHHHH
T ss_conf 74300024321799999886449879961502144557722317989998100015765311100100013343221111
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~G~~l~p~~a~ll~rgl~TL~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgL~s~p~~~~~~~~~~g~g~~~sf~~~ 320 (398)
T d1qgna_ 241 HHILGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVD 320 (398)
T ss_dssp HHHHCCCCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEES
T ss_pred CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHCCCCCCEEEEEEC
T ss_conf 03677748979999998333477889999889999999999739882005788888993365554325898720466643
Q ss_pred -----------------------------------------------------------------------------E
Q ss_conf -----------------------------------------------------------------------------8
Q 002647 518 -----------------------------------------------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------------------------------------------a 518 (897)
.
T Consensus 321 g~~~~a~~f~~~L~l~~~a~SlGg~~SLi~~p~~~th~~~~~~~~~~~Gi~~~liRlSvGlEd~eDLi~Dl~~AL~~i 398 (398)
T d1qgna_ 321 GDLLTTAKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFGVEDFDDLKADILQALDSI 398 (398)
T ss_dssp SCHHHHHHHHHHCSSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECCSSCHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHCCCCCEEEECCCCCCCEEECCCHHCCCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHCC
T ss_conf 999999999972885626268788761121750113100899999965989297999761089999999999998429
|
| >d1vpea_ c.86.1.1 (A:) Phosphoglycerate kinase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate kinase superfamily: Phosphoglycerate kinase family: Phosphoglycerate kinase domain: Phosphoglycerate kinase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=30042.10 Aligned_cols=1 Identities=0% Similarity=0.304 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~kltl~d~~l~~k~Vl~R~D~NvPi~~g~i~d~~RI~~~~pTI~~l~~~~akvil~SH~GRP~g~~~~~~Sl~~~~~~L~ 80 (398)
T d1vpea_ 1 EKMTIRDVDLKGKRVIMRVDFNVPVKDGVVQDDTRIRAALPTIKYALEQGAKVILLSHLGRPKGEPSPEFSLAPVAKRLS 80 (398)
T ss_dssp CBCBGGGSCCTTCEEEEECCCCCCEETTEESCCHHHHHHHHHHHHHHHTTCEEEEECCCSCCCSSCCGGGCSHHHHHHHH
T ss_pred CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 98762004847998999931477533995887289999999999999789989998378999998887668799999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~l~~~v~f~~d~~~~~~~~~~~~l~~g~i~lLEN~Rf~~~E~~n~~~f~k~La~l~DiyVnDAFg~sHR~haS~~gi~~ 160 (398)
T d1vpea_ 81 ELLGKEVKFVPAVVGDEVKKAVEELKEGEVLLLENTRFHPGETKNDPELAKFWASLADIHVNDAFGTAHRAHASNVGIAQ 160 (398)
T ss_dssp HHHTSCCEEESCSSSHHHHHHHHTCCTTEEEEECCGGGSTHHHHTCHHHHHHHHTTCSEEEECCGGGTTSCCTTTTGGGG
T ss_pred HHHCCEEEEEECCCCHHHHHHHHCCCCCCEEEEHHHHHCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHCCCCCEECHHH
T ss_conf 63164079850368658899861578876897244442432333247799998605560342543566515875011345
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~lps~aG~l~ekEi~~L~k~l~~~~~P~~aIlGGaKisdKi~~i~~L~~k~D~iiigG~~antfL~a~G~~iG~sl~e~~ 240 (398)
T d1vpea_ 161 FIPSVAGFLMEKEIKFLSKVTYNPEKPYVVVLGGAKVSDKIGVITNLMEKADRILIGGAMMFTFLKALGKEVGSSRVEED 240 (398)
T ss_dssp TSCEEECHHHHHHHHHHHHHHHCCCSSEEEEECSSCHHHHHHHHHHHTTTCSEEEECTTTHHHHHHHTSCCCTTSCCCGG
T ss_pred HCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEECCHHHHHHHHHCCCCCCCCCCCHH
T ss_conf 46101147778789876422101467517996157635079999988875022232423789999974997788753412
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~i~~~a~~~~~~i~lP~d~~v~~~~~~~~~~~~~~~~~~i~~~~~ilDIG~~Ti~~~~~~I~~aktI~WNGP~G 320 (398)
T d1vpea_ 241 KIDLAKELVEKAKEKGVEIVLPVDAVIAQKIEPGVEKKVVRIDDGIPEGWMGLDIGPETIELFKQKLSDAKTVVWNGPMG 320 (398)
T ss_dssp GHHHHHHHHHHHHHTTCEEECCSEEEEESSCSTTCCCEEEETTTCCCTTCEEEEECHHHHHHHHHHHTTCSEEEEESCSS
T ss_pred HHHHHHHHHHHHHHCCCCCCCCHHEEECCCCCCCCCCEEECCCCCCCCCCEEECCCCCHHHHHHHHHCCCCEEEEECCCC
T ss_conf 56789999987665288511001012110003566520213124798765321366500899998745576799974612
Q ss_pred -----------------------------------------------------------------------------E
Q ss_conf -----------------------------------------------------------------------------8
Q 002647 518 -----------------------------------------------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------------------------------------------a 518 (897)
+
T Consensus 321 ~fE~~~F~~GT~~l~~~ia~~t~~~~~sIiGGGdT~aai~~~g~~~~f~hvSTGGGA~Le~L~G~~LPgi~aL~~~~a 398 (398)
T d1vpea_ 321 VFEIDDFAEGTKQVALAIAALTEKGAITVVGGGDSAAAVNKFGLEDKFSHVSTGGGASLEFLEGKELPGIASMRIKKA 398 (398)
T ss_dssp CTTSGGGCHHHHHHHHHHHHHHHTTCEEEEESHHHHHHHHHTTCGGGSSEEESCHHHHHHHHTSSCCHHHHTSCBCCC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCCEEEECCHHHHHHHHCCCCCHHHHHHHHCCC
T ss_conf 011662417999999999987238998999178999999972986796089677899999987999718999863549
|
| >d1vlja_ e.22.1.2 (A:) NADH-dependent butanol dehydrogenase A (TM0820) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Dehydroquinate synthase-like superfamily: Dehydroquinate synthase-like family: Iron-containing alcohol dehydrogenase domain: NADH-dependent butanol dehydrogenase A (TM0820) species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=30033.56 Aligned_cols=1 Identities=0% Similarity=-0.161 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~M~~f~f~~p~~i~~G~g~~~~l~~~l~~~g~~rvliVt~~~~~~~~g~~~~l~~~L~~~gi~~~~f~~v~~~pt~~~ 80 (398)
T d1vlja_ 1 HHHMENFVFHNPTKIVFGRGTIPKIGEEIKNAGIRKVLFLYGGGSIKKNGVYDQVVDSLKKHGIEWVEVSGVKPNPVLSK 80 (398)
T ss_dssp CCCCCCEEECCCCEEEESTTCGGGHHHHHHHTTCCEEEEEECSSHHHHSSHHHHHHHHHHHTTCEEEEECCCCSSCBHHH
T ss_pred CCCCCCEEEECCCEEEECCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHH
T ss_conf 99888728758986998549999999999965998489998974787731999999999865991999867159989899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 v~~~~~~~~~~~~D~IIavGGGs~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~P~i~iPTt~gtgse~t~~avi~~~~ 160 (398)
T d1vlja_ 81 VHEAVEVAKKEKVEAVLGVGGGSVVDSAKAVAAGALYEGDIWDAFIGKYQIEKALPIFDVLTISATGTEMNGNAVITNEK 160 (398)
T ss_dssp HHHHHHHHHHTTCSEEEEEESHHHHHHHHHHHHHTTCSSCGGGGGGTSCCCCCCCCEEEEECSCSSCGGGSSEEEEEETT
T ss_pred HHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCEEEEECCCCCCEECCCCCEEEECC
T ss_conf 99876411456676688448863112788889886414556776436644367787335414654432113552132001
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~K~~~~~~~~~p~~~i~Dp~l~~~~P~~~~~~~~~Dal~h~~E~~~s~~~~~~s~~~a~~~~~~~~~~l~~~~~~~~~ 240 (398)
T d1vlja_ 161 TKEKYGVSSKALYPKVSIIDPSVQFTLPKEQTVYGAVDAISHILEYYFDGSSPEISNEIAEGTIRTIMKMTERLIEKPDD 240 (398)
T ss_dssp TTEEEEEECGGGSCSEEEECGGGGGGSCHHHHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred CCCCCEEEECCCCCEEEEEEHHHCCCCCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 25420232012443169985564077740001131266998866531021256434577899988740233664038987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~ar~~l~~a~~~a~~~~~~~~~~~~~g~~H~l~h~l~~~~~v~HG~~~ai~lp~v~~~~~~~~~~~~~~la~~l~~~~~ 320 (398)
T d1vlja_ 241 YEARANLAWSATIALNGTMAVGRRGGEWACHRIEHSLSALYDIAHGAGLAIVFPAWMKYVYRKNPAQFERFAKKIFGFEG 320 (398)
T ss_dssp HHHHHHHHHHHHHHTSSTTTTTSCSCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHGGGSHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCC
T ss_conf 99987667789988888876530576402111112113455877022024016789999987574689999999738899
Q ss_pred -----------------------------------------------------------------------------E
Q ss_conf -----------------------------------------------------------------------------8
Q 002647 518 -----------------------------------------------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~e~~~~~~~~l~~~~~~lglP~~L~elGi~~~~i~~ia~~a~~~~~~~~npr~~~~~~~~~l~~e~i~~Il~~A~~ 398 (398)
T d1vlja_ 321 EGEELILKGIEAFKNWLKKVGAPVSLKDAGIPEEDIDKIVDNVMLLVEKNLKPKGASLGRIMVLEREDVREILKLAAK 398 (398)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCCCSTGGGTCCGGGHHHHHHHHHHHHHHTTGGGTCCSCSSSCCCHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
T ss_conf 819999999999999999859999989939999999999999996766427987676213334899999999999659
|
| >d1y4ia1 c.67.1.3 (A:2-398) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Methionine gamma-lyase, MGL species: Citrobacter freundii [TaxId: 546]
Probab=100.00 E-value=0 Score=29962.61 Aligned_cols=1 Identities=0% Similarity=-1.790 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~d~k~~~f~T~~ih~G~~~~~~~g~v~pPI~~sST~~~~~~~~~~~~~~~~~~~~~Y~R~~nPT~~~LE~~la~LEgg~~ 80 (397)
T d1y4ia1 1 SDCRTYGFNTQIVHAGQQPDPSTGALSTPIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLERGEA 80 (397)
T ss_dssp CCGGGSCHHHHHHHTTCCCCTTTCCSSCCCCCCSCCCCSSHHHHHHHHHSCSSSSCCCTTSCHHHHHHHHHHHHHHTCSE
T ss_pred CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCC
T ss_conf 99888981100376798888789992188028888650888999876347768966658988789999999999849962
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 a~~~sSGmaAi~~~l~~ll~~Gd~vi~~~~~Yg~t~~~~~~~l~~~Gi~~~~vd~~d~~~~~~~i~~~Tklv~~Esp~NP 160 (397)
T d1y4ia1 81 GLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAGKPEEIRAAMRPETKVVYIETPANP 160 (397)
T ss_dssp EEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTTSHHHHHHHCCTTEEEEEEESSCTT
T ss_pred CEEEHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHCCCCCCCEEEECCCCCCHHHHHHHCCCCCCEEEECCCCCC
T ss_conf 11106778888887763168998654301012331035431367785575414899989999865877738980487522
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~l~v~Di~~i~~iA~~~gi~~vvDnT~atP~~~~Pl~~GaDivihS~TKyi~Ghsdvl~G~v~~~~~~~~~~r~~~~~~~ 240 (397)
T d1y4ia1 161 TLSLVDIETVAGIAHQQGALLVVDNTFMSPYCQQPLQLGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDI 240 (397)
T ss_dssp TCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHHT
T ss_pred CEEECCCHHHHHHHHCCCCEEEECCCCCCCCCCCCHHCCCCEEEEEHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHC
T ss_conf 11003307899886047852870275227154763202897899851351078741465215787889999999999967
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~G~~l~p~~a~l~~rgl~TL~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~h~~~~~~~~g~gg~~sf~~~~~~ 320 (397)
T d1y4ia1 241 TGGCMSPFNAWLTLRGVKTLGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGGL 320 (397)
T ss_dssp TCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHCSSCCSEEEEEETTHH
T ss_pred CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCH
T ss_conf 49858989999997471769999999999999999999748996767488878996522223446778759999956999
Q ss_pred ----------------------------------------------------------------------------E
Q ss_conf ----------------------------------------------------------------------------8
Q 002647 518 ----------------------------------------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~f~~~L~l~~~a~SlGg~eSLi~~p~~~th~~~~~e~r~~~Gi~~~liRlsvGlEd~~DLi~Dl~~AL~~a~~ 397 (397)
T d1y4ia1 321 EAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRKATF 397 (397)
T ss_dssp HHHHHHHHTCSSSEECSCCSCSSCEEECTTTTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHCCCCCCEEECCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_conf 99999997289362305637432032276312654589999997598929799976119999999999999987219
|
| >d1q1la_ d.258.1.1 (A:) Chorismate synthase, AroC {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Chorismate synthase, AroC superfamily: Chorismate synthase, AroC family: Chorismate synthase, AroC domain: Chorismate synthase, AroC species: Aquifex aeolicus [TaxId: 63363]
Probab=100.00 E-value=0 Score=29961.05 Aligned_cols=1 Identities=0% Similarity=-1.790 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~r~ttfGESHG~aig~vIdG~PaG~~id~~~i~~~L~RRrpG~~~~~t~R~E~D~veilSGv~~g~TtG~PI~~~I 80 (397)
T d1q1la_ 1 SLRYLRFLTAGESHGKGLTAILEGIPANLPLSEEEINHELRRRQRGYGRGGRMKIEKDTAEILSGVRFGKTLGSPIALFI 80 (397)
T ss_dssp CCSSCEEEEECCTTSSEEEEEEECCCBTCBCCHHHHHHHHHHHHTTCC------CCSCCEEEEESEETTEECSSCEEEEE
T ss_pred CCCEEEEECCCCCCCCEEEEEEECCCCCCEECHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECEECCEECCCCEEEEE
T ss_conf 96569996034578984489980508488848999999985689899999866799984799145158980678559999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~N~D~~~~~y~~~~~~~~~~~~~~~~~pRPGHAD~~~~~KYg~~d~r~gggRsSaReTa~rVaAGaIAk~~L~~~gI~v~ 160 (397)
T d1q1la_ 81 RNRDWENWKEKMAIEGEPSPSVVPFTRPRPGHADLSGGIKYNQRDLRNILERASARETAARVAVGAVCKKFLSEFGIKIG 160 (397)
T ss_dssp ECSCC-------------------------------CTTTTTCSSTHHHHHHHSGGGHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred ECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_conf 87876654543322356205554440488887536778874576666766514788999999999999999998498788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 s~v~~IG~i~~~~~~d~~~~~~~~~~~~~~~~~~~s~vrc~d~~~~~~m~~~I~~~r~~gDSvGG~ve~~~~gvP~GLGe 240 (397)
T d1q1la_ 161 SFVVSIGQKEVEELKDKSYFANPEKLLSYHEKAEDSELRIPFPEKDEEFKTYIDEVKEKGESLGGVFEVFALNVPPGLGS 240 (397)
T ss_dssp EEEEEETTEECGGGSSGGGGGCHHHHHHHHHHHTTSTTCCSCGGGHHHHHHHHHHHHTTTCCBCEEEEEEEESCCTTCSC
T ss_pred EEEEEECCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCC
T ss_conf 89999866752434555445780233556887650750357656999999999999856886440699999658887667
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 pv~~ddkLda~LA~AlmSIpAvKgvEfG~Gf~~a~~~GSe~nD~~~~~~~~~~~~~tN~aGGilGGISnG~pI~~rva~K 320 (397)
T d1q1la_ 241 HIQWDRRIDGRIAQAMMSIQAIKGVEIGLGFEAARRFGSQVHDEIGWSEGKGYFRHSNNLGGTEGGITNGMPIVVRVAMK 320 (397)
T ss_dssp SSSGGGCHHHHHHHHHHTSTTEEEEEETTGGGGGGSBGGGTCCCEEEETTTEEEESCCTTTTEETTEECSSCEEEEEEEC
T ss_pred CCCCCCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEC
T ss_conf 73444442489999875040144301265166776630235565313478873355667764245765886089999978
Q ss_pred ----------------------------------------------------------------------------E
Q ss_conf ----------------------------------------------------------------------------8
Q 002647 518 ----------------------------------------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------------------------------------a 518 (897)
-
T Consensus 321 P~sSI~~~q~Tvd~~~~e~~~~~~gRhDpcivpra~~VvEAm~alvlaD~~L~k~g~d~~~~~~~~~~~y~~~~~~~ 397 (397)
T d1q1la_ 321 PIPTLKNPLRSVDIETKEEMKAGKERTDIVAVPAASVVGEAMLAIVLADALLEKLGGDFMEEVKKRFEDYVNHVKSF 397 (397)
T ss_dssp CCCC------------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHCCSBHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 86446775636237898777502799898578763389999999999999999857984999999999999997529
|
| >d1vkoa1 c.2.1.3 (A:11-314,A:429-521) Myo-inositol 1-phosphate synthase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Myo-inositol 1-phosphate synthase species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=0 Score=29959.75 Aligned_cols=1 Identities=0% Similarity=0.537 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~~v~s~~v~y~~~~i~~~y~y~~t~v~~~~~~~~v~p~~~~~~f~t~~~vpklGVmLVG~GGnngTT~~aGv~Anr~g 80 (397)
T d1vkoa1 1 KRLIVESPNVKLEDGVLESRFTYRKNHFEHRADGLHVTPKEHDYSFKTVLKPRKTGLLLVGLGGNNGSTAVGSIFANQYA 80 (397)
T ss_dssp CCCCCCCTTEEEETTEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEECSCCCEEEEEETTTSHHHHHHHHHHHHHHTT
T ss_pred CCEEEECCCEEECCCEEEEEEEECCEEEEEECCCEEEEEEEEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHCC
T ss_conf 94488399738737558999886104999817935998767778998416688258998438840888999999998758
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 L~w~tk~G~~~an~~GSltq~stirlG~~~~~~~~~~~P~kd~lPl~~p~DiVfGGWDI~~~nL~eAa~rA~VLd~~ll~ 160 (397)
T d1vkoa1 81 MTWRTKEGHSQANYFGSVTQTATVHLGYDSATQNQIFVPFKDIVPILSPNDLIISGWDISDSNLYEAMGRAKVFEPELQE 160 (397)
T ss_dssp CEEEETTEEEECCCTTCHHHHCEEEEEEETTTTEEEEEEGGGTSCCCCGGGEEEEEECSSCCCTTHHHHHHTCSCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCHHHHCEEEECCCCCCCCCCCCCHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHCCCCCHHHHH
T ss_conf 97546677405886351443033575135789873356376517889821168944469999889999875999989999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~l~~~L~~i~P~psv~~pdfia~nq~~ra~nv~~g~~k~e~ve~Ir~DIr~Fk~~~~ldrVVVlwtAsTEr~~~~~~~v~ 240 (397)
T d1vkoa1 161 KLRPFMEPIVPLPSIYYPDFIASNQGDRANNVIPGDNKLEHLEHIRADIRKFKQEHELECVIVLWTANTERYTDVRQGLN 240 (397)
T ss_dssp HHHHHHTTCCCBCBCCCGGGSCGGGGGGCCSBCCSSCHHHHHHHHHHHHHHHHHHHTCSEEEEEECSCCCCCCCCCTTTT
T ss_pred HHHHHHHCCCCCCCCCCCHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCC
T ss_conf 99999860865542107277775135200151358889999999999999999974997699998158777777761200
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~t~e~l~~ai~~n~~eIsPS~lYA~AAi~eG~pyiNgsPq~t~vPal~eLA~~~~v~iaG~DfKTLLaspliLDl~ll~e 320 (397)
T d1vkoa1 241 ATADEIMESIRVNEDEVSPSNIFAVASILEGAHYINGSPQNTLVPGLIELAERHKVFVGGDDFKSLLASPLIYDLAILTE 320 (397)
T ss_dssp SSHHHHHHHHHTTCSSCCHHHHHHHHHHHTTCEEEECSSSCCCCHHHHHHHHHHTCCEECSCBCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHH
T ss_conf 16999999986699878859999999997599623699755666459999986199665257898755188886999996
Q ss_pred ----------------------------------------------------------------------------E
Q ss_conf ----------------------------------------------------------------------------8
Q 002647 518 ----------------------------------------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------------------------------------a 518 (897)
-
T Consensus 321 l~~Ri~~k~~~~~~~~~~Vls~LS~~~KaPl~~~g~~~vn~l~kQr~~l~N~lR~~~Gl~p~~~m~lEy~~~lp~~k 397 (397)
T d1vkoa1 321 LASRVSYKVDDEYKPFHSVLSILSLLLKAPVVPPGTPISNAFMRQFSTLTKLVTALAGFPSDTDMQIEFFTQLPAAK 397 (397)
T ss_dssp HHTTEEEESSSSEECCCSBCGGGGGGBSSCCCSTTSCCCCCHHHHHHHHHHHHHHHHTCCCCTTSCGGGTSCCCCCC
T ss_pred HHHEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCC
T ss_conf 64178862254004752077776665268888999866028899999999999998299977754303310055579
|
| >d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aromatic aminoacid aminotransferase, AroAT species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29956.42 Aligned_cols=1 Identities=0% Similarity=-1.723 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~dpi~~~~~~~~~d~~~~kInL~iG~~~d~~g~~p~~~~V~~A~~~l~~~~~~~~~Y~p~~G~~~lR~aia 80 (397)
T d3tata_ 1 MFQKVDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIA 80 (397)
T ss_dssp CCCCCCCCCCCTTTTHHHHHHHSCCSSCEECSCCSCCCTTSSCCCCHHHHHHHHHHTTSCCSSBCCCCTTCCHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 96557778999488999997268998948850787738889988868999999999717666787898555899999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~~~~~ 160 (397)
T d3tata_ 81 PLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRF 160 (397)
T ss_dssp HHHTCSSCHHHHTTCEEECCBSHHHHHHHHHHHHHHHHCSSCCCEECSSCCTTHHHHHHTTTCCCEECCCCCTTTSSCCH
T ss_pred HHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHCCCEEEEEECCHHHCCCCCH
T ss_conf 99852259767767689845760377888988776533799833662667666279999869979997465142256420
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~i 240 (397)
T d3tata_ 161 NDLLATLKTLPARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPAL 240 (397)
T ss_dssp HHHHHHHTTCCSSCCCEECSSSCSSSCCCCCHHHHHHHHHHHHHTTCCCEECBSCTTSSSCHHHHHHHHHHHHTTTCCCE
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCCEECCHHHHHHHHHHHHHCCEEEEEEHHHHHHCCCCCCCCHHHHHHHHCCCCEE
T ss_conf 77899864066552899826899997841788999999999853694699415531001697533114554442277359
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~s~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (397)
T d3tata_ 241 VSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLAEVEEMRTRIL 320 (397)
T ss_dssp ECBCCHHHHTBTTTCCBCCEEECSSTTHHHHHHHHHHHHTTTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 98447665333576512110011678999988888887752256666078999999860788889999988889999999
Q ss_pred ----------------------------------------------------------------------------E
Q ss_conf ----------------------------------------------------------------------------8
Q 002647 518 ----------------------------------------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------------------------------------a 518 (897)
.
T Consensus 321 ~~r~~l~~~L~~~~~~~~~~~~~~~~G~F~~~~ls~e~~~~L~~e~~V~l~~g~Ri~~a~~~~~~i~~~~~ai~~v~ 397 (397)
T d3tata_ 321 AMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLSAAQVDRLREEFGVYLIASGRMCVAGLNTANVQRVAKAFAAVM 397 (397)
T ss_dssp HHHHHHHHTTTTTCTTSCTTHHHHCCSSBCCCCCCHHHHHHHTTTTCEECCSSSCCBTTSCCTTTHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCHHHHHHHHHHCCEEECCCCEEEECCCCHHHHHHHHHHHHHHC
T ss_conf 99999999999848998648876898417841919999999999599995798879852599889999999999869
|
| >d1vjva_ d.3.1.9 (A:) Ubiquitin carboxyl-terminal hydrolase 6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Cysteine proteinases superfamily: Cysteine proteinases family: Ubiquitin carboxyl-terminal hydrolase, UCH domain: Ubiquitin carboxyl-terminal hydrolase 6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=29953.82 Aligned_cols=1 Identities=0% Similarity=-0.958 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~~~p~GL~N~GNtCY~NSvLQ~L~~~p~f~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~l~~~~~~~i~p~ 80 (397)
T d1vjva_ 1 QFAQLPVGFKNMGNTCYLNATLQALYRVNDLRDMILNYNPSQGVSNSGAQDEEIHKQIVIEMKRCFENLQNKSFKSVLPV 80 (397)
T ss_dssp CCCCCCCEECCCSSCHHHHHHHHHHHHSHHHHHHHHTCCGGGCCSCTTSTTHHHHHHHHHHHHHHHHHHHCC-CCEECCH
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHH
T ss_conf 98789988888884079999999998089999999817741011346654322589999999999999985898714879
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~QqDa~Efl~~ll~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 160 (397)
T d1vjva_ 81 VLLNTLRKCYPQFAERDSQGGFYKQQDAEELFTQLFHSMSIVFGDKFSEDFRIQFKTTIKDTANDNDITVKENESDSKLQ 160 (397)
T ss_dssp HHHHHHHHHCGGGGCBC----CBCCCCHHHHHHHHHHHHHHHHTHHHHTTTCEEEEEEEEETTEEEEEEEECCCEESCEE
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCEEEEEEEECCCCCCCCEECCEEEEEEE
T ss_conf 99999999704322465566634126689999999999987733213554155120058862336644213540211233
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~l~i~l~R~~~~~~~~~~~k~~~~~~~~~~ld~~ 240 (397)
T d1vjva_ 161 CHISGTTNFMRNGLLEGLNEKIEKRSDLTGANSIYSVEKKISRLPKFLTVQYVRFFWKRSTNKKSKILRKVVFPFQLDVA 240 (397)
T ss_dssp ECCCTTCCBHHHHHHHHHEEC---------CCCCEEEEEEEEECBSEEEEEECCEEEETTTTEEEECCCCCBCCSEEECG
T ss_pred EEECCCEEECHHHHHHHHHHHHCCCCCCCCCCCEEEEECEEECCCCEEEEEEEEEEECCCCCCCCCCCCEEECCCEEECC
T ss_conf 46326412202778764366540534555787523220423238952377766654214556110327625267077525
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (397)
T d1vjva_ 241 DMLTPEYAAEKVKVRDELRKVEKEKNEKEREIKRRKFDPSSSENVMTPREQYETQVALNESEKDQWLEEYKKHFPPNLEK 320 (397)
T ss_dssp GGBCHHHHHHHHHHHHHHHHHHHHHHHC----------------CCCHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHCCCCHHCCCHHHHCCCCCCCCCCC
T ss_conf 32110233320015676644331111477777640468766532234200011000023100110001000135632123
Q ss_pred ----------------------------------------------------------------------------E
Q ss_conf ----------------------------------------------------------------------------8
Q 002647 518 ----------------------------------------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~Y~L~aVv~H~G~~~~~GHY~ay~r~~~~~~~W~~~nD~~V~~v~~~~V~~~~~~~~~~~aYlLfY~r~~~ 397 (397)
T d1vjva_ 321 GENPSCVYNLIGVITHQGANSESGHYQAFIRDELDENKWYKFNDDKVSVVEKEKIESLAGGGESDSALILMYKGFGL 397 (397)
T ss_dssp TBCSSSEEEEEEEEEEESSSTTSSEEEEEEECSSCTTCEEEEETTEEEEECHHHHHGGGCCTTSCEEEEEEEEETTC
T ss_pred CCCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCEEEEEECCCCEECCHHHHHHHHCCCCCCEEEEEEEEECCC
T ss_conf 67899888999999996599999682899989999898999989877799889998750899888189999996489
|
| >d1lf6a1 a.102.1.5 (A:288-684) Bacterial glucoamylase, C-terminal domain {Thermoanaerobacterium thermosaccharolyticum [TaxId: 1517]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: Bacterial glucoamylase C-terminal domain-like domain: Bacterial glucoamylase, C-terminal domain species: Thermoanaerobacterium thermosaccharolyticum [TaxId: 1517]
Probab=100.00 E-value=0 Score=29953.76 Aligned_cols=1 Identities=0% Similarity=0.271 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~s~~~lk~~~~~~~~GaiiAsptt~~~e~~~~~~~~~Y~y~W~RDaa~~~~al~~~G~~~~a~~~l~~ 80 (397)
T d1lf6a1 1 NNFNGKANSLYYNSMMILKASEDKTNKGAYIASLSIPWGDGQRDDNTGGYHLVWSRDLYHVANAFIAAGDVDSANRSLDY 80 (397)
T ss_dssp CCTTTTCCHHHHHHHHHHHTTBCSSSTTCBCSCSSCTTGGGSBSBSCCGGGSBCHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 99873799999999999998047789964897677886655689889997057272599999999985997999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 l~~~~~~~G~~~~~~~~~G~~~~~~~q~D~~g~~i~a~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~lWEe~~g~~~~t 160 (397)
T d1lf6a1 81 LAKVVKDNGMIPQNTWISGKPYWTGIQLDEQADPIILSYRLKRYDLYDSLVKPLADFIIKIGPKTGQERWEEIGGYSPAT 160 (397)
T ss_dssp HHHHHHHHSSCCSCBCTTSCBCCCCCCHHHHHHHHHHHHHTTCGGGTTTTHHHHHHHHHHHCSSBSSCTTSSCCBBCHHH
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH
T ss_conf 99995325877887886798645677776699999999999753406899999999999838887655454457864203
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~aL~~~a~la~~~g~~~~a~~~~~~A~~i~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 240 (397)
T d1lf6a1 161 MAAEVAGLTCAAYIAEQNKDYESAQKYQEKADNWQKLIDNLTYTENGPLGNGQYYIRIAGLSDPDADFMINIANGGGVYD 240 (397)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHEESSCSSTTSCEECSCBSSSCTTSCCEEEETTTTEEEE
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 67799999999999886088157999999999999999983428356610243200146666753110001245434456
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~lDasll~~~~~g~~~~~d~~~~~tl~~i~~~l~~~~g~~~~~~RY~~D~y~~~~~~~~~~~~~~g~pW~i~T~~~a 320 (397)
T d1lf6a1 241 QKEIVDPSFLELVRLGVKSADDPKILNTLKVVDSTIKVDTPKGPSWYRYNHDGYGEPSKTELYHGAGKGRLWPLLTGERG 320 (397)
T ss_dssp GGGCCCGGGGHHHHTTSSCTTCHHHHHHHHHHHHHSEEEETTEEEECSSTTCCCSCSBTTBCCSSSSCCCBBHHHHHHHH
T ss_pred CCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 67776778763110378788878999999999987166777666654454555343577677667868754999999999
Q ss_pred ----------------------------------------------------------------------------E
Q ss_conf ----------------------------------------------------------------------------8
Q 002647 518 ----------------------------------------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------------------------------------a 518 (897)
+
T Consensus 321 ~~~~~~g~~A~~~l~~~~~~~~~~G~l~E~~d~~tG~~~g~a~plaWS~A~~i~~~~~l~~~~~~~~~~~~~~~~~~ 397 (397)
T d1lf6a1 321 MYEIAAGKDATPYVKAMEKFANEGGIISEQVWEDTGLPTDSASPLNWAHAEYVILFASNIEHKVLDMPDIVYKRYVA 397 (397)
T ss_dssp HHHHHTTCCCHHHHHHHHHHSCTTSCCCSCBCTTTCCBCSSCSSCHHHHHHHHHHHHHHHHTSCTTSCHHHHHHHTC
T ss_pred HHHHHCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC
T ss_conf 99997117999999999976688886350046989984899954788999999999998649976666788887309
|
| >d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aspartate aminotransferase, AAT species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29878.50 Aligned_cols=1 Identities=0% Similarity=-2.021 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~f~~~~~~p~d~i~~~~~~~~~d~~~~kInL~iG~~~d~~g~~p~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~lR~aia~ 80 (396)
T d2q7wa1 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQE 80 (396)
T ss_dssp -CTTCCCCCC-----------------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 96445547998599999998466899968830787658889989988999999999618988988997677999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~gd~Vlvp~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~~~ 160 (396)
T d2q7wa1 81 LLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFD 160 (396)
T ss_dssp HHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHH
T ss_pred HHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCCCEEEECCCCCCCCCCCCCC
T ss_conf 99861698666442013213417899999999886315650899816888430599998599067245434456542210
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~i~~~~P~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~ 240 (396)
T d2q7wa1 161 ALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIV 240 (396)
T ss_dssp HHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEE
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCC
T ss_conf 57778988515838999568849949336889987788877048819998615354346986674286654562344211
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~s~sk~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (396)
T d2q7wa1 241 ASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQR 320 (396)
T ss_dssp EEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 33564434445777442446606899999865556665504445787899999999853913678999999999999999
Q ss_pred ---------------------------------------------------------------------------E
Q ss_conf ---------------------------------------------------------------------------8
Q 002647 518 ---------------------------------------------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------------------------------------------a 518 (897)
.
T Consensus 321 ~r~~l~~~L~~~~~~~~~~~~~~~~G~F~~~~l~~e~~~~L~~e~gV~~~~g~Ri~~a~l~~~~i~~~~~ai~~v~ 396 (396)
T d2q7wa1 321 MRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 396 (396)
T ss_dssp HHHHHHHHHHHTTCCSCCTHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTCEEEGGGCCTTTHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCCCCCEECCCCEEEEEECCCHHHHHHHHHHCCEEECCCCEEEECCCCHHHHHHHHHHHHHHC
T ss_conf 9999999999828988741564897179951879999999999689997799879952898788999999999869
|
| >d2bwna1 c.67.1.4 (A:2-397) 5-aminolevulinate synthase {Rhodobacter capsulatus [TaxId: 1061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: 5-aminolevulinate synthase species: Rhodobacter capsulatus [TaxId: 1061]
Probab=100.00 E-value=0 Score=29882.40 Aligned_cols=1 Identities=0% Similarity=-1.424 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~l~~l~~~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~FsSndYLGL~~~p~v~~a~~~al~~yG~gs~ 80 (396)
T d2bwna1 1 DYNLALDKAIQKLHDEGRYRTFIDIEREKGAFPKAQWNRPDGGKQDITVWCGNDYLGMGQHPVVLAAMHEALEAVGAGSG 80 (396)
T ss_dssp CHHHHHHHHHHHHHHTTCCCCCCEEEECTTSTTEEEEECTTSCEEEEEECSCSCTTSGGGCHHHHHHHHHHHHHHCSCCC
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 96799999999999859986342012246788740474027998289998852102768999999999999999589864
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~Sr~~~G~~~~h~~LE~~lA~~~g~e~all~~sG~~An~~~i~~l~~~~~~d~i~~D~~~Hasi~~g~~ls~a~~~~f~H 160 (396)
T d2bwna1 81 GTRNISGTTAYHRRLEAEIAGLHQKEAALVFSSAYNANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRH 160 (396)
T ss_dssp SBTTTBCCBHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECT
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCEEEHHHHHHCCCHHHHCCCCCCEEEEC
T ss_conf 55244587449999999999974998515540113778889998760367984310534223000143046667337632
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 nd~~~l~~l~~~~~~~~~~~iv~egvySmdGd~apl~~l~~L~~~y~~~L~vDeAHs~Gv~G~~G~G~~~~~~~~~~~di 240 (396)
T d2bwna1 161 NDVAHLRELIAADDPAAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDI 240 (396)
T ss_dssp TCHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSE
T ss_pred CHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHCCEEEECCCEEEEEECCCCCCCHHHCCCCEEEEE
T ss_conf 36877666776405667616999752367644466176899865424066501210110221666662233187312124
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~gTlsKa~g~~Gg~v~~~~~~i~~l~~~~~~~ifStalpp~~~aa~~~al~i~~~~~~~~~r~~l~~~~~~~~~~l~~~ 320 (396)
T d2bwna1 241 FNGTLAKAYGVFGGYIAASARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL 320 (396)
T ss_dssp EEEESSSTTCSCCEEEEECHHHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 53124655533554353268999998751213453136757778899999997631207899999999999999889866
Q ss_pred ---------------------------------------------------------------------------E
Q ss_conf ---------------------------------------------------------------------------8
Q 002647 518 ---------------------------------------------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------------------------------------------a 518 (897)
-
T Consensus 321 g~~~~~~~spIvpv~ig~~~~~~~~a~~lL~e~Gi~v~~i~~PtVp~g~~rlRi~lsa~ht~edId~l~~~L~~iw 396 (396)
T d2bwna1 321 GMPIIDHGSHIVPVVIGDPVHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLW 396 (396)
T ss_dssp TCCBCCCSSSCEEEECCCHHHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHC
T ss_conf 9986899999799996999999999999999689899987899689997269998576699999999999999859
|
| >d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: 1,4-alpha-glucan branching enzyme, central domain species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29877.42 Aligned_cols=1 Identities=0% Similarity=-0.625 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~iYe~~~~~f~~~~~~~~~g~~~gi~~klidyl~~LGv~~iwl~Pi~~~~~~~~hGY~~~d~~ 80 (396)
T d1m7xa3 1 VVQTEERKKANQFDAPISIYEVHLGSWRRHTDNNFWLSYRELADQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLY 80 (396)
T ss_dssp CCCCHHHHHHHSTTSCCEEEEECTTSSCBCTTTCCBCCHHHHHHHHHHHHHHTTCSEEEESCCEECSCGGGTTSSCSEEE
T ss_pred CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 96641024578889986799772571477899998879999999899999982998899698887899899896867587
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~vdp~~Gt~~d~~~LV~~aH~~gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (396)
T d1m7xa3 81 APTRRFGTRDDFRYFIDAAHAAGLNVILDWVPGHFPTDDFALAEFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFL 160 (396)
T ss_dssp EECGGGSCHHHHHHHHHHHHHTTCEEEEEECTTSCCCSTTSSTTGGGSCSSBCC-----------CCCBCTTSHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 71824289899999999985420333201143446786555554567863235678778778877754467772358999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~gvDG~R~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 240 (396)
T d1m7xa3 161 VGNALYWIERFGIDALRVDAVASMIYRDYSRKEGEWIPNEFGGRENLEAIEFLRNTNRILGEQVSGAVTMAEESTDFPGV 240 (396)
T ss_dssp HHHHHHHHHHSCCCEEEECCSHHHHCC--------------CTTCCHHHHHHHHHHHHHHHHSSTTCEEEECCSSCCTTT
T ss_pred HHHHHHHHHHHCCCCEEEECHHHHCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
T ss_conf 99999889985786323311423122010011111111103566550289999999999863479946997521787532
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (396)
T d1m7xa3 241 SRPQDMGGLGFWYKWNLGWMHDTLDYMKLDPVYRQYHHDKLTFGILYNYTENFVLPLSHDEVVHGKKSILDRMPGDAWQK 320 (396)
T ss_dssp TBCTTTTBSCCSEEECHHHHHHHHHHHHSCGGGGGGCTHHHHGGGTTTTTSCEEEEECGGGSSTTSCCHHHHSCSSHHHH
T ss_pred CCCCCCCCCCHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 22000354320334211022344430000013444422223100111055521222344322457774223688877899
Q ss_pred ---------------------------------------------------------------------------E
Q ss_conf ---------------------------------------------------------------------------8
Q 002647 518 ---------------------------------------------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~la~a~llt~pG~P~IYyGdEiG~~~~~~~~~~~~w~~~~~~~~~~~~l~~~~~~L~~lR~~~paL~~~~~~ 396 (396)
T d1m7xa3 321 FANLRAYYGWMWAFPGKKLLFMGNEFAQGREWNHDASLDWHLLEGGDNWHHGVQRLVRDLNLTYRHHKAMHELDFD 396 (396)
T ss_dssp HHHHHHHHHHHHHSSSEEEEETTTTTTCSSCCCTTSCCCGGGGCSSCCHHHHHHHHHHHHHHHHTTCGGGTSCTTS
T ss_pred HHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCC
T ss_conf 9999999999998178547056512487899998887782111476534279999999999999739876460789
|
| >d1io1a_ e.32.1.1 (A:) Phase 1 flagellin {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Phase 1 flagellin superfamily: Phase 1 flagellin family: Phase 1 flagellin domain: Phase 1 flagellin species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=0 Score=29811.80 Aligned_cols=1 Identities=0% Similarity=-0.227 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~i~gl~qa~~N~~d~~s~lqtae~al~~~~~iL~r~reLavqaan~t~~~~dr~ai~~E~~~l~~ei~~ia~~T~fng~~ 80 (395)
T d1io1a_ 1 NIKGLTQASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVK 80 (395)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCBTTBC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEECCCC
T ss_conf 97138899998999999999999999999999999999999850578999999999999999999999999737028802
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 Ll~Gs~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (395)
T d1io1a_ 81 VLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSDTAATVTGYADTTIALDNSTFKASATGLGGTDQK 160 (395)
T ss_dssp TTTSCEEEEEECSSSTTCEEEEEECCCSTTTTTCTTCCCCCCCEEEEEECCCCSEEEEEEECBGGGSTTTCGGGCSSEEE
T ss_pred CCCCCCCEEEEECCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 23556725897247875058997123310001121100222322333211122222211013443222112232232100
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (395)
T d1io1a_ 161 IDGDLKFDDTTGKYYAKVTVTGGTGKDGYYEVSVDKTNGEVTLAGGATSPLTGGLPATATEDVKNVQVANADLTEAKAAL 240 (395)
T ss_dssp ECSSEEEETTTTEEEEEEEEETCSSCCEEEEEEECTTTCBEEESTTCCSCCTTSSCTTCCEEESEEEEEGGGCHHHHHHH
T ss_pred CCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 01221111101110000011222221000110000133210011222111223444333210001000000120011100
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (395)
T d1io1a_ 241 TAAGVTGTASVVKMSYTDNNGKTIDGGLAVKVGDDYYSATQNKDGSISINTTKYTADDGTSKTALNKLGGADGKTEVVSI 320 (395)
T ss_dssp HHTTCCSCEEEEEEEEECTTSCEEEEEEEEEETTEEEEEEECTTSCEEECBCCBBCSSSSCBCCBEEEESTTSCEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEEC
T ss_conf 00012233222221113421100145532112221001101222332123322222200233102222234341035412
Q ss_pred --------------------------------------------------------------------------E
Q ss_conf --------------------------------------------------------------------------8
Q 002647 518 --------------------------------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~i~v~t~~~A~~Al~~iD~Ai~~v~~~Ra~lGA~qNRle~ti~NL~~~~~N~~aar 395 (395)
T d1io1a_ 321 GGKTYAASKAEGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDTLRSDLAAVQNRFNSAITNLGNTVNNLTSAR 395 (395)
T ss_dssp TTEEEEHHHHTTCBTTTSCCCCCCCCSCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 551021123455332222102466488899999999999999999998755698868999998999999998519
|
| >d2bfda1 c.36.1.11 (A:6-400) Branched-chain alpha-keto acid dehydrogenase, PP module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiamin diphosphate-binding fold (THDP-binding) superfamily: Thiamin diphosphate-binding fold (THDP-binding) family: Branched-chain alpha-keto acid dehydrogenase PP module domain: Branched-chain alpha-keto acid dehydrogenase, PP module species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=29806.96 Aligned_cols=1 Identities=0% Similarity=0.537 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~ld~~g~~~~~~~~~~ls~e~l~~~Yr~M~~~R~~e~~~~~l~~~G~i~~ 80 (395)
T d2bfda1 1 KPQFPGASAEFIDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISF 80 (395)
T ss_dssp CCCCTTCCCCCCSSCCCCCCCCSSCSCEECSBCTTSCBSCGGGCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99899987756655455787667888806778999999884236998999999999999999999999999996897012
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~GqEA~~vg~~~al~~~D~~~~~yR~h~~~la~G~~~~~~~ael~g~~~g~~~Grggs~H~~~~~~~~~~~~~ivg 160 (395)
T d2bfda1 81 YMTNYGEEGTHVGSAAALDNTDLVFGQAREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLA 160 (395)
T ss_dssp CCCCTTCHHHHHHHHHTSCTTSEEECCSCCHHHHHHTTCCHHHHHHHHHTCTTCTTTTCSCSSCCCBTTTTBCCCCSSTT
T ss_pred CCCCCCHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 50898869999999997697780134445367244431789999998740035764456654443323346311344334
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~p~A~G~A~a~k~~~~~~v~v~~~GDGa~~eG~f~EalN~A~~~~lPvlfv~eNN~yaist~~~~~~~~~~i~~ra~~ 240 (395)
T d2bfda1 161 TQIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPG 240 (395)
T ss_dssp THHHHHHHHHHHHHHHTCCCCEEEEEETTGGGSHHHHHHHHHHHHTTCCEEEEEEECSEETTEEGGGTCSSSTTGGGTGG
T ss_pred CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHCCHHHHHHHHC
T ss_conf 55107888888765037654443114788754113889999986237743799986133422200210011168876310
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~gi~~~~vDG~Dv~aV~~a~~~A~~~~R~g~gP~lIE~~TyR~~~Hs~~DD~~~YR~~~Ei~~w~k~DdPi~~~~~~Li~ 320 (395)
T d2bfda1 241 YGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHASTSDDSSAFRSVDEVNYWDKQDHPISRLRHYLLS 320 (395)
T ss_dssp GTCEEEEEETTCHHHHHHHHHHHHHHHHHHTCCEEEEEECCCCC--CC-------------------CCHHHHHHHHHTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 35541688337389888888876433312687537887663588887767732466889999988549899999999998
Q ss_pred --------------------------------------------------------------------------E
Q ss_conf --------------------------------------------------------------------------8
Q 002647 518 --------------------------------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~g~~s~ee~~~i~~e~~~eV~~A~~~A~~~p~P~~~~l~~~VYae~p~~l~eq~~~~~~~~~~~~e~~~~~~~~~ 395 (395)
T d2bfda1 321 QGWWDEEQEKAWRKQSRRKVMEAFEQAERKPKPNPNLLFSDVYQEMPAQLRKQQESLARHLQTYGEHYPLDHFDK 395 (395)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHHHHHHHHSCBCCGGGGSTTSSSSCCHHHHHHHHHHHHHHHHHGGGSCGGGBCC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCC
T ss_conf 799999999999999999999999999858997989998450159997799999999999996725388455349
|
| >d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cyp121 monooxygenase (P450 Mt2) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=0 Score=29796.76 Aligned_cols=1 Identities=0% Similarity=-1.391 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~p~~~~~~~~~~~~~~LR~~~Pv~~~~~~~g~~~wvvt~~~dv~~vl~d~~~~~~~~~~~~~~~~~~~~~~~~ 80 (395)
T d1n40a_ 1 TATVLLEVPFSARGDRIPDAVAELRTREPIRKVRTITGAEAWLVSSYALCTQVLEDRRFSMKETAAAGAPRLNALTVPPE 80 (395)
T ss_dssp -CCCCCBSCCCCCSSSCCHHHHHHHHHCSEEEEECTTSCEEEEECSHHHHHHHHTCTTEESGGGGSTTCCCSSCCSSCGG
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 99877789988777677399999995299789874899769997799999999769774768776677654444447817
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~d~~~H~~~R~~~~~~Fsp~~~~~~~~i~~~~~~ll~~l~~~g~~~Dlv~~~a~~l~~~vi~~llG~p~~d~~~~~ 160 (395)
T d1n40a_ 81 VVNNMGNIADAGLRKAVMKAITPKAPGLEQFLRDTANSLLDNLITEGAPADLRNDFADPLATALHCKVLGIPQEDGPKLF 160 (395)
T ss_dssp GGGHHHHHHHTTCHHHHHHHTSSCSTTHHHHHHHHHHHHHHHHHHHCSCEETTTTTHHHHHHHHHHHHHTCCGGGHHHHH
T ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 76537871579999999987309999988789999999862033356664418888777655457777522345677777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ls~~el~~~~~~l~~AG~eTTa~~ 240 (395)
T d1n40a_ 161 RSLSIAFMSSADPIPAAKINWDRDIEYMAGILENPNITTGLMGELSRLRKDPAYSHVSDELFATIGVTFFGAGVISTGSF 240 (395)
T ss_dssp HTHHHHTBCCSSCCHHHHHHHHHHHHHHHHHHHCTTCCSHHHHHHHHHHTSGGGTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHH
T ss_conf 65433333200136999999999999878899875103677777666430566665540035678999875200012335
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 l~~~l~~L~~~P~~~~~l~~e~~~~~~~i~E~lRl~~p~~~~~~R~a~~d~~i~G~~ip~G~~V~~~~~~a~rDp~~f~d 320 (395)
T d1n40a_ 241 LTTALISLIQRPQLRNLLHEKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPN 320 (395)
T ss_dssp HHHHHHHHHTCHHHHHHHHHCGGGHHHHHHHHHHTCCCBCSCEEEEESSCEEETTEEECTTCEEEECHHHHHTCTTTSSS
T ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC
T ss_conf 67888877629630001110123433323320134554543212210232112234565542022201212456200898
Q ss_pred --------------------------------------------------------------------------E
Q ss_conf --------------------------------------------------------------------------8
Q 002647 518 --------------------------------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------------------------------a 518 (897)
=
T Consensus 321 P~~F~p~R~~~~~~l~FG~G~h~C~G~~lA~~e~~~~l~~ll~r~p~~~l~~~~~~~~~~~~~~~r~~~~LpV~~ 395 (395)
T d1n40a_ 321 PGSIELDRPNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLAVPIDQLVWRTRFQRRIPERLPVLW 395 (395)
T ss_dssp TTSCCTTCSSTTCSSTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCSBSBCCBSCCEEEC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEECCCCCCCCCEEEEEEC
T ss_conf 021387899998877779988369149999999999999999967997888885667461686333871216569
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=0 Score=29803.15 Aligned_cols=1 Identities=0% Similarity=-0.160 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~W~~~~~~~l~v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllR 80 (395)
T d1nw1a_ 1 GMKELLSTMDLDTDANTIPELKERAHMLCARFLGGAWKTVPLEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLR 80 (395)
T ss_dssp CHHHHHTTCCTTCCGGGCHHHHHHHHHHHHHHHCTHHHHCCGGGEEEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEE
T ss_pred CHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEE
T ss_conf 94445045654566543615899999999986711026899301699991785334348999688775445789817999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 i~g~~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~g~I~efi~g~~l~~~d~~~~~~~~~iA~~La~lH~~~~~~~~~~ 160 (395)
T d1nw1a_ 81 VYFNPETESHLVAESVIFTLLSERHLGPKLYGIFSGGRLEEYIPSRPLSCHEISLAHMSTKIAKRVAKVHQLEVPIWKEP 160 (395)
T ss_dssp EECSCCCHHHHHHHHHHHHHHHHTTSSSCEEEEETTEEEECCCCEEECCTTGGGSHHHHHHHHHHHHHHTTCCCSSCCSS
T ss_pred ECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 65996116589999999999975799980899818956999734554883331465555999999999850332236675
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~l~~~~~~lv~CHnDL~~~NiL~~~~~~~~~ 240 (395)
T d1nw1a_ 161 DYLCEALQRWLKQLTGTVDAEHRFDLPEECGVSSVNCLDLARELEFLRAHISLSKSPVTFCHNDLQEGNILLPKASSGNI 240 (395)
T ss_dssp CHHHHHHHHHHHHHHHHSCTTCCEECCGGGSCCEECHHHHHHHHHHHHHHHTTCCCCEEEECSCCCGGGEEEEC------
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEECCCCCCCC
T ss_conf 42888999999765431237776434555302444499999999999987430369846885578856376536433222
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~l~lID~EYa~~n~~~fDian~f~E~~~~y~~~~~~~~~~~~~~~ps~e~~~~fi~ 320 (395)
T d1nw1a_ 241 RMPSLSDETQALGNSLSAFNPADPRLVLIDFEYASYNYRAFDFANHFIEWTIDYDIDEAPFYKIQTENFPENDQMLEFFL 320 (395)
T ss_dssp ------------------------CCEECCCTTCEEEEHHHHHHHHHHHTTEECCCSSTTSCEECGGGSCCHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 34553100023444322356888827998542367885066599999997055677666532134234939999999999
Q ss_pred --------------------------------------------------------------------------E
Q ss_conf --------------------------------------------------------------------------8
Q 002647 518 --------------------------------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------------------------------a 518 (897)
|
T Consensus 321 ~Yl~~~~~~~~~~~~~~~~~l~~~v~~~~~~s~l~W~lW~~iq~~~~~~~fDy~~Y~~~Rl~~y~~~k~~l~~~~ 395 (395)
T d1nw1a_ 321 NYLREQGNTRENELYKKSEDLVQETLPFVPVSHFFWGVWGLLQVELSPVGFGFADYGRDRLSLYFKHKQLLKNLA 395 (395)
T ss_dssp HHHHHHTCSCGGGHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHCCSSSCHHHHHHHHHHHHHHTHHHHHTTC
T ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999873666510679999999999999998857899999999646448998999999999999999999887119
|
| >d2py6a1 c.66.1.56 (A:14-408) Methyltransferase FkbM {Methylobacillus flagellatus [TaxId: 405]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: FkbM-like domain: Methyltransferase FkbM species: Methylobacillus flagellatus [TaxId: 405]
Probab=100.00 E-value=0 Score=29802.75 Aligned_cols=1 Identities=0% Similarity=-1.424 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~ 80 (395)
T d2py6a1 1 DPLAMNDSFLAAADALAVDPMFGIPANVREVIARRGNATRLVILGTKGFGAHLMNVRHERPCEVIAAVDDFRYHSGELYY 80 (395)
T ss_dssp CGGGHHHHHHHHHHHHHHCTTTTSCHHHHHHHHHHGGGCEEEEECSSSTHHHHHSCSSSCSSEEEEEECTTTTTSCCEET
T ss_pred CCHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCHHHCCCEEC
T ss_conf 94116778887788754472320868899999850897528997686458999999987794699996684232286533
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 g~pv~s~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (395)
T d2py6a1 81 GLPIISTDRFTELATHDRDLVALNTCRYDGPKRFFDQICRTHGIPHLNFEQAVRAFGLQGNVDYRVDDWGADIVRNIPAF 160 (395)
T ss_dssp TEEEECHHHHHHHHHTCTTEEEEECCCSHHHHHHHHHHHHHTTCCEEEHHHHHHHTTCTTSSCGGGSCCHHHHHHTHHHH
T ss_pred CEEEECHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 55751678864344226857999813641122589999876598400157778873774234402444589999869999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~L~D~~S~~~~~~~l~~rl~~d~~~~~~~~~~~~~~YF~~~i~~l~kn~vfIDVGAniG~~s~~f~~~~~~~~~k 240 (395)
T d2py6a1 161 QTLAQRLADDYSVQTLYAVLNFHLTCEPEYYHEVERPYSTLYFRSGLLRFSDSEKMVDCGASIGESLAGLIGVTKGKFER 240 (395)
T ss_dssp HHHHHHCSSHHHHHHHHHHHHHHHHCCTHHHHHHCCCGGGTTTSSSSCCCCSSCEEEEETCTTSHHHHHHHHHHTSCCSE
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCE
T ss_conf 99998713776599999999998639989985135758776543404676799899997758778899999966899998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 V~aFEP~p~n~~~LkkNi~~n~~~n~~~~I~~~~~alsd~~~~~~f~~~~~~~s~~~~~~~~~~~~~~V~~~tLD~l~~~ 320 (395)
T d2py6a1 241 VWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAGENTIRVPFNHEGGHGGFVKPADADHEPADLIDVRPIDDIIDD 320 (395)
T ss_dssp EEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEECSSCEEEEC--------------------CEEEEECHHHHCSS
T ss_pred EEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEHHHHCCC
T ss_conf 99993987999999999985622255543999998961661389985179865310135667775189998788995378
Q ss_pred --------------------------------------------------------------------------E
Q ss_conf --------------------------------------------------------------------------8
Q 002647 518 --------------------------------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~id~IKIDVEG~E~~VLkGa~~~Lk~~kPiI~IEiyh~~~d~~~i~~~L~~l~~~Y~~~lR~h~~~~~d~vlY~~ 395 (395)
T d2py6a1 321 APTFIKMDIEGSELSALKGARRAISEHKPKLAISAYHRSTDLLDLTNYILSIRPDYQIGLRHHTPDRWDTCLYFY 395 (395)
T ss_dssp CCSEEEECCSSCHHHHHHTTHHHHHHHCCEEEEECCSSTTHHHHHHHHHHHHCTTCCEEEEECSSSSCCEEEEEC
T ss_pred CCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEC
T ss_conf 998899968998799999789999867987999995257659999999998636974999668987501489859
|
| >d1aora1 a.110.1.1 (A:211-605) Aldehyde ferredoxin oxidoreductase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Aldehyde ferredoxin oxidoreductase, C-terminal domains superfamily: Aldehyde ferredoxin oxidoreductase, C-terminal domains family: Aldehyde ferredoxin oxidoreductase, C-terminal domains domain: Aldehyde ferredoxin oxidoreductase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=100.00 E-value=0 Score=29801.66 Aligned_cols=1 Identities=0% Similarity=-2.122 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 vad~~~f~~~~~~~~~~~~~~p~~~~~l~~~GT~~~~~~~~~~g~lP~~Nf~~g~~~~a~~isge~~~~~~~~r~~~C~~ 80 (395)
T d1aora1 1 IADKQKFMLVVREKVNKLRNDPVAGGGLPKYGTAVLVNIINENGLYPVKNFQTGVYPYAYEQSGEAMAAKYLVRNKPCYA 80 (395)
T ss_dssp CSSHHHHHHHHHHHHHHHHHSHHHHTHHHHHCGGGHHHHHHHTTCCCBTTTTBSCCTTGGGGSHHHHHHHTEEEEECCTT
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCHHCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHHHHHHHCCCCCCCCC
T ss_conf 98989999999999999982970415321109299999998769877488888889971542899999986146999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 Cpi~C~~~~~~~~~~~~~gpEYEt~~a~Gs~~Gi~d~~~v~~~n~l~d~~GlDtIs~G~~ia~amE~~e~Gll~~e~~gd 160 (395)
T d1aora1 81 CPIGCGRVNRLPTVGETEGPEYESVWALGANLGINDLASIIEANHMCDELGLDTISTGGTLATAMELYEKGHIKDEELGD 160 (395)
T ss_dssp CSSCCEEEEEETTTEEEECCCHHHHHHHTGGGTCCCHHHHHHHHHHHHHHTBCHHHHHHHHHHHHHHHHTTSSCHHHHTT
T ss_pred CCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHCCC
T ss_conf 98674834770688753687730110300124899999999999999996813887868999999999779887242066
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~l~wGd~e~~~~li~~IA~r~g~G~~LA~G~~~aae~~G~~~~a~~vkg~e~p~~dpr~~~g~~l~yat~~~G~~H~~ 240 (395)
T d1aora1 161 APPFRWGNTEVLHYYIEKIAKREGFGDKLAEGSYRLAESYGHPELSMTVKKLELPAYDPRGAEGHGLGYATNNRGGCHIK 240 (395)
T ss_dssp SCCCCTTCTHHHHHHHHHHHTTCTTHHHHTTCHHHHHHHTTCGGGCCEETTEECCSCCGGGCHHHHHHHHHCTTSSCSGG
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHEEECCCCCCHHHH
T ss_conf 77879999999999999998467417888223999999959823546744777443377653132311001577640233
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~e~~g~~~~~dp~~~~e~k~~~~~~~q~~~~~~dslg~C~F~~~~~~~~~~~~~~~avTG~~~t~e~l~~~geRi 320 (395)
T d1aora1 241 NYMISPEILGYPYKMDPHDVSDDKIKMLILFQDLTALIDSAGLCLFTTFGLGADDYRDLLNAALGWDFTTEDYLKIGERI 320 (395)
T ss_dssp GCTHHHHTTCSSSCCCTTCCSHHHHHHHHHHHHHHHHHHHHTCCGGGGTTCCHHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred HCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf 22244754389765785514379999999999999996013434413667999999999997538899999999999999
Q ss_pred --------------------------------------------------------------------------E
Q ss_conf --------------------------------------------------------------------------8
Q 002647 518 --------------------------------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~l~R~fN~r~G~~~~~dD~lP~r~~~ep~~~G~~kg~~~~~e~~l~~YY~~rGWd~~G~Pt~e~L~~LgL~d~~ 395 (395)
T d1aora1 321 WNAERLFNLKAGLDPARDDTLPKRFLEEPMPEGPNKGHTVRLKEMLPRYYKLRGWTEDGKIPKEKLEELGIAEFY 395 (395)
T ss_dssp HHHHHHHHHHHTCCHHHHSCCCHHHHHSCCCSSTTTTCCCCHHHHHHHHHHHHTCCTTSCCCHHHHHHHTCGGGC
T ss_pred HHHHHHHHHHCCCCHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCC
T ss_conf 999999999747983654569887724888878777876789999999999839898898799999976891339
|
| >d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Putative alanine aminotransferase species: Pyrococcus furiosus [TaxId: 2261]
Probab=100.00 E-value=0 Score=29798.75 Aligned_cols=1 Identities=0% Similarity=-0.393 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~s~r~~~~~~~ir~i~~~a~~l~~~G~~vi~l~~G~P~~~df~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LR~aia 80 (395)
T d1xi9a_ 1 SIRASKRALSVEYAIRDVVLPARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIV 80 (395)
T ss_dssp CCCCCHHHHTCCC-------CHHHHHHTTCCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHH
T ss_pred CCCCHHCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
T ss_conf 96300040357478999999999999779970899899999789999799999999999638898899978999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~g~~~~~~~i~i~~G~~~~~~~~~~~~~~~Gd~vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~~~ 160 (395)
T d1xi9a_ 81 EREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIR 160 (395)
T ss_dssp HHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHH
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCHHHHHH
T ss_conf 86432045231212232322220132100121047999899838833331000320597799984332235431278899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~ 240 (395)
T d1xi9a_ 161 KKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVYF 240 (395)
T ss_dssp HHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEEEEEESTTTTC
T ss_pred HHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCHHCC
T ss_conf 76402650899669989754101179999998555425855774121000132222345032078888899958622142
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~GlRvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 320 (395)
T d1xi9a_ 241 ATGWRLGYMYFVDPENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEIPGIST 320 (395)
T ss_dssp CGGGCCEEEEEECTTCTTHHHHHHHHHHHHHTCCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTSTTEEC
T ss_pred CCHHHCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 54010076685187999999999988864378784799999999986087999999999999999999999986799411
Q ss_pred --------------------------------------------------------------------------E
Q ss_conf --------------------------------------------------------------------------8
Q 002647 518 --------------------------------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~p~gg~~~~~~l~~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~~~~~~~Ris~~~~~e~l~eal~rl~~~l~er 395 (395)
T d1xi9a_ 321 TKPQGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEILEEAMDRFEKFMKER 395 (395)
T ss_dssp CCCCBSSEECCEECSCSCSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCC
T ss_conf 589855898178888899999999999999699999847332889979799996489999999999999999549
|
| >d1w36b2 c.37.1.19 (B:486-880) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Tandem AAA-ATPase domain domain: Exodeoxyribonuclease V beta chain (RecB), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29802.84 Aligned_cols=1 Identities=0% Similarity=-1.290 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~g~~~p~~~~w~~~~~~~~~~~~~~~~A~~~A~~I~~ll~~~~~~~~~~~~~~~~r~v~~~DIAILvR~~~~~~ 80 (395)
T d1w36b2 1 ALRFVFKGETQPAMKMWLMEGESCGVGDYQSTMAQVCAAQIRDWLQAGQRGEALLMNGDDARPVRASDISVLVRSRQEAA 80 (395)
T ss_dssp TEEEEETTEEECSEEEEECCSSCCCTTHHHHHHHHHHHHHHHHHHHHHHTTCEEEEETTEEEECCGGGEEEEESSHHHHH
T ss_pred CCEEEECCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCEEEEEECCHHHH
T ss_conf 95367889768700210389876551309999999999999999971203653004677767788143899983766699
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~i~~aL~~~gIP~v~~~~~~~l~~~~ev~~llalL~~l~~p~d~~~l~~~L~sp~~gl~~~~l~~~~~~~~~~~~~~~~~ 160 (395)
T d1w36b2 81 QVRDALTLLEIPSVYLSNRDSVFETLEAQEMLWLLQAVMTPERENTLRSALATSMMGLNALDIETLNNDEHAWDVVVEEF 160 (395)
T ss_dssp HHHHHHHTTTCCEEETTCCCBGGGSSHHHHHHHHHHHHTCTTSHHHHHHHHHSGGGTCCHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHH
T ss_conf 99999998599859935875432569999999999977455647889998708556999999998751267799999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~e~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 240 (395)
T d1w36b2 161 DGYRQIWRKRGVMPMLRALMSARNIAENLLATAGGERRLTDILHISELLQEAGTQLESEHALVRWLSQHILEPDSNASSQ 240 (395)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHTTHHHHHHHSSSHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHSCCCCSTTB
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHH
T ss_conf 99999998634258999999875499999863671799999998999999998745778899999999986143231233
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~daV~ImTIHkSKGLEfpvVflp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~Ee~RLlYVA 320 (395)
T d1w36b2 241 QMRLESDKHLVQIVTIHKSKGLEYPLVWLPFITNFRVQEQAFYHDRHSFEAVLDLNAAPESVDLAEAERLAEDLRLLYVA 320 (395)
T ss_dssp CCCCTTGGGSEEEEETTTTSSCCEEEEEETTTTCCCCCCSCEEECTTTCCEEEESSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HCCCCCCCCEEEEECHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 10110256508997114530677778997167668886556666555532225766465578898899999997454645
Q ss_pred --------------------------------------------------------------------------E
Q ss_conf --------------------------------------------------------------------------8
Q 002647 518 --------------------------------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------------------------------a 518 (897)
.
T Consensus 321 lTRAk~~L~l~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~ 395 (395)
T d1w36b2 321 LTRSVWHCSLGVAPLVRRRGDKKGDTDVHQSALGRLLQKGEPQDAAGLRTCIEALCDDDIAWQTAQTGDNQPWQV 395 (395)
T ss_dssp HTTEEEEEEEEECCCCCSCSCCSSCCGGGGSHHHHHHTCSSCCCHHHHHHHHHHSCSTTEEEEECCCCCCCCCCC
T ss_pred HHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf 734726118997555666788788865778799999707888886779998987457876667789998999879
|
| >d1phpa_ c.86.1.1 (A:) Phosphoglycerate kinase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate kinase superfamily: Phosphoglycerate kinase family: Phosphoglycerate kinase domain: Phosphoglycerate kinase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=0 Score=29731.34 Aligned_cols=1 Identities=0% Similarity=-0.924 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 M~~ktl~d~d~~~K~VlvR~D~NvPi~~g~I~d~~RI~~~~pTI~~ll~~~akvvl~SH~GRPkgk~~~~~Sl~~~~~~L 80 (394)
T d1phpa_ 1 MNKKTIRDVDVRGKRVFCRVDFNVPMEQGAITDDTRIRAALPTIRYLIEHGAKVILASHLGRPKGKVVEELRLDAVAKRL 80 (394)
T ss_dssp CCBCBGGGSCCTTCEEEEECCCCCCEETTEESCCHHHHHHHHHHHHHHHTTCEEEEECCCSCCCSSCCGGGCSHHHHHHH
T ss_pred CCCCCCCCCCCCCCEEEEEEECCCCCCCCEECCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 99785111376799999994058776099389758999999999999978998999858889999888655569999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~l~~~v~f~~~~~~~~~~~~i~~l~~g~i~lLEN~Rf~~~E~~nd~~fak~La~l~DiyVNDAF~~aHR~haS~~gi~ 160 (394)
T d1phpa_ 81 GELLERPVAKTNEAVGDEVKAAVDRLNEGDVLLLENVRFYPGEEKNDPELAKAFAELADLYVNDAFGAAHRAHASTEGIA 160 (394)
T ss_dssp HHHHTSCCEECSCSSSHHHHHHHHTCCTTCEEECCCGGGSHHHHHTCHHHHHHHHTTCSEEEECCGGGTTSCCTTTTGGG
T ss_pred HHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEHHHHHCCCCCCCCHHHHHHHCCCCCEEEECCHHHHHCCCCCCCCHH
T ss_conf 87406241113443567899999605789788635445354432153889974254488999665136551477511000
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~lps~aG~l~ekEi~~L~~~l~~p~rP~~aIiGGaKisdKi~~i~~l~~k~D~i~igG~mantfl~a~G~~iG~sl~e~ 240 (394)
T d1phpa_ 161 HYLPAVAGFLMEKELEVLGKALSNPDRPFTAIIGGAKVKDKIGVIDNLLEKVDNLIIGGGLAYTFVKALGHDVGKSLLEE 240 (394)
T ss_dssp GTSCEEECHHHHHHHHHHHHHHHSCCSSEEEEECSSCHHHHHHHHHHHTTTCSEEEECTTHHHHHHHHTTCCCTTSCCCG
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEECCHHHHHHHHHCCCCCCCCCCCC
T ss_conf 02662001108999999999973899976999706763327999987875357278742287999998599667324331
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~a~~i~~~~~~~~~~i~lP~D~v~~~~~~~~~~~~~~~~~~i~~~~~ilDIG~~Ti~~~~~~I~~aktI~WNGPmG 320 (394)
T d1phpa_ 241 DKIELAKSFMEKAKEKGVRFYMPVDVVVADRFANDANTKVVPIDAIPADWSALDIGPKTRELYRDVIRESKLVVWNGPMG 320 (394)
T ss_dssp GGHHHHHHHHHHHHHHTCEEECCSEEEEESSSSTTSCEEEEEGGGCCTTCEEEEECHHHHHHHHHHHHTCSEEEEESCSS
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHCEEEEECCEE
T ss_conf 14778999998776429865588630432123455662477701214786003567248999999986530589955523
Q ss_pred -------------------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~fE~~~F~~GT~~l~~~ia~~~~a~sivGGGdT~aai~~~g~~~~~shvSTGGGA~Le~L~G~~LPgi~aL~~k 394 (394)
T d1phpa_ 321 VFEMDAFAHGTKAIAEALAEALDTYSVIGGGDSAAAVEKFGLADKMDHISTGGGASLEFMEGKQLPGVVALEDK 394 (394)
T ss_dssp CTTSGGGCHHHHHHHHHHHHCTTCEEEECSHHHHHHHHHTTCGGGSSEECSCTHHHHHHHTTCCCHHHHTSCBC
T ss_pred EEECCCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCCCEEECCHHHHHHHHCCCCCCHHHHHHCC
T ss_conf 56346241899999999996589869995779999999749867885796678999999879997358785169
|
| >d1e5ea_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL1 [TaxId: 5722]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Methionine gamma-lyase, MGL species: Trichomonas vaginalis, MGL1 [TaxId: 5722]
Probab=100.00 E-value=0 Score=29731.21 Aligned_cols=1 Identities=0% Similarity=-0.194 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~~~~T~~vh~g~~~d~~gav~~PI~~sst~~~~~~~~~~~~~~~~~~~~~YsR~~nPT~~~le~~la~LEg~~~a~~~ 80 (394)
T d1e5ea_ 1 ERMTPATACIHANPQKDQFGAAIPPIYQTSTFVFDNCQQGGNRFAGQESGYIYTRLGNPTVSNLEGKIAFLEKTEACVAT 80 (394)
T ss_dssp CCCCHHHHHHHSSCCCCTTCCSSCCCCCCSBCCCSSHHHHHHHHTTSSCSCCBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCCCHHHHHEECCCCCCCCCCEECCCCCCCCEEECCHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 99997899646889989999830880488886518889998751688678534598887899999999998298502234
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 sSGmaAi~~~~l~l~~~gd~vv~~~~~yg~t~~~~~~~~~~~gi~~~~~d~~d~~~~~~~i~~~t~lv~~Etp~NP~l~v 160 (394)
T d1e5ea_ 81 SSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTAIPGEVKKHMKPNTKIVYFETPANPTLKI 160 (394)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHHCCTTEEEEEEESSCTTTCCC
T ss_pred CCCHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCCEEE
T ss_conf 36228889998740233443344541320036767777630543542147899999997516456589994257763122
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~Di~~~~~~~~~~~g~~vvvDnT~atP~~~~Pl~~GaDiVvhS~TKy~~GhsDv~~G~v~~~~~~~~~~~~~~~~~~~G~ 240 (394)
T d1e5ea_ 161 IDMERVCKDAHSQEGVLVIADNTFCSPMITNPVDFGVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKDITGS 240 (394)
T ss_dssp CCHHHHHHHHHTSTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCCCCCC
T ss_pred EHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHCCCCEEEECHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 12444420132456708873376547645784011798899612342078743233334431468999999999973277
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~lsp~~a~ll~rgl~TL~lRm~r~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~~~G~~~sf~~~~~~~~a 320 (394)
T d1e5ea_ 241 VISPHDAWLITRGLSTLNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKSGFEGA 320 (394)
T ss_dssp CCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETTHHHHH
T ss_pred CCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHCCCCCCCCEEEEECCCCHHHH
T ss_conf 78867799999601068899999988899999997652884577577756632155530344667872454026989999
Q ss_pred -------------------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~f~~~l~l~~~a~SlGg~eSLi~~p~~~th~~~~~~~r~~~Gi~~~liRlSVGlEd~eDLi~Dl~qAl~~l~~ 394 (394)
T d1e5ea_ 321 KKLLDNLKLITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGIEDADELIADFKQGLDALLR 394 (394)
T ss_dssp HHHHHTCSSSEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHCCCCCEEECCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_conf 99998088061535668766035785102521189999996698939799976218999999999999999639
|
| >d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aromatic aminoacid aminotransferase, AroAT species: Paracoccus denitrificans [TaxId: 266]
Probab=100.00 E-value=0 Score=29727.89 Aligned_cols=1 Identities=0% Similarity=-1.655 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~~~~~~~~d~i~~l~~~~~~d~~~~~InL~iG~~~d~~g~~~~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~lr~aia~ 80 (394)
T d2ay1a_ 1 MLGNLKPQAPDKILALMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGE 80 (394)
T ss_dssp CGGGCCCCCCCSHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 98778878998399999997178998978851787658889989888999999998508878988997778999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gd~V~~p~p~~~~y~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~ 160 (394)
T d2ay1a_ 81 LILGDGLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMK 160 (394)
T ss_dssp HHHGGGCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHH
T ss_pred HHHCCCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCCEEEEECCCCHHCCCCCCHHHH
T ss_conf 97365654346420003572688889988765428844999832321011899998599799941430101442202688
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~i~~~~~p~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~s 240 (394)
T d2ay1a_ 161 ADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAAS 240 (394)
T ss_dssp HHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEE
T ss_pred HHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCHHHCCCCCCCCHHHHHHHHHCCCCCCCCC
T ss_conf 88764136868999479999899989999999999875304289987525122211666664045544443245443345
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~sk~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~r~ 320 (394)
T d2ay1a_ 241 CSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLRE 320 (394)
T ss_dssp CTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 55666677654201030426899999865366765202423224788889887227888999999999999999999999
Q ss_pred -------------------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------------------a 518 (897)
+
T Consensus 321 ~l~~~L~~~~~~~~~~~~~~~~G~F~~~~ls~~~~~~L~~~~~V~~~~g~Ri~~a~l~~~~i~~l~~ai~~v~~ 394 (394)
T d2ay1a_ 321 QLAGELRDLSGSDRFGFVAEHRGMFSRLGATPEQVKRIKEEFGIYMVGDSRINIAGLNDNTIPILARAIIEVGV 394 (394)
T ss_dssp HHHHHHHHHHTSSTTTHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTCEEEGGGCCTTTHHHHHHHHHHHTC
T ss_pred HHHHHHHHHCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHCCEEECCCCEEEECCCCHHHHHHHHHHHHHHCC
T ss_conf 99999998489886036779961698519399999999996898956987899537998889999999998279
|
| >d1u1ha1 c.1.22.2 (A:2-395) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: UROD/MetE-like family: Cobalamin-independent methionine synthase domain: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=0 Score=29727.76 Aligned_cols=1 Identities=0% Similarity=-0.061 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~lG~PRig~~RELK~A~E~yw~G~is~~eL~~~~~~~~~~~~~~Q~~aGid~I~~GeFs~yD~vLD~~~~~g~iP~R 80 (394)
T d1u1ha1 1 ASHIVGYPRMGPKRELKFALESFWDGKSTAEDLQKVSADLRSSIWKQMSAAGTKFIPSNTFAHYDQVLDTTAMLGAVPPR 80 (394)
T ss_dssp CBBCSCCCCSCTTCHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHTTCSBCEESCCCSSCHHHHHHHHTTCCCGG
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHCCCCCCC
T ss_conf 98767589889761899999999779999999999999999999999998599961559840258899999981996534
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 f~~~~~~~~ld~yFa~arg~~~~~a~emtkwfdtnyhy~vPe~~~~~~~~l~~~~~~~~~~ea~~~g~~~Kpvl~GP~T~ 160 (394)
T d1u1ha1 81 YGYTGGEIGLDVYFSMARGNASVPAMEMTKWFDTNYHYIVPELGPEVNFSYASHKAVNEYKEAKALGVDTVPVLVGPVSY 160 (394)
T ss_dssp GCCCSSSCCHHHHHHHHHCBTTBCCCCEEECTTSSCEEECCEECTTCCCCCCCCHHHHHHHHHHHTTCCCEEEEECHHHH
T ss_pred CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHH
T ss_conf 44445666288887887258764444554345789774577407886345540168999998763487646245778999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 l~l~k~~~~~~~~~~~~~ll~~L~~aY~~~l~~L~~aG~~~VQiDEP~L~~dl~~~~~~~~~~ay~~l~~~~~~~~i~l~ 240 (394)
T d1u1ha1 161 LLLSKAAKGVDKSFELLSLLPKILPIYKEVITELKAAGATWIQLDEPVLVMDLEGQKLQAFTGAYAELESTLSGLNVLVE 240 (394)
T ss_dssp HHTCEECTTCCTTCCGGGGHHHHHHHHHHHHHHHHHHTCCEEEEECGGGGSCCCHHHHHHHHHHHHHHTTTTTTSEEEEE
T ss_pred HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEE
T ss_conf 97753247876544799999999999999999987665988986062021369999999999999999864489974378
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 tyfg~~~~~~~~~l~~~~~Vd~l~lD~~~~~~~l~~~~~~~p~~k~L~~GVVdgrniw~ed~e~v~~~i~~~~~~v~~er 320 (394)
T d1u1ha1 241 TYFADIPAEAYKTLTSLKGVTAFGFDLVRGTKTLDLVKAGFPEGKYLFAGVVDGRNIWANDFAASLSTLQALEGIVGKDK 320 (394)
T ss_dssp CCSSCCCHHHHHHHTTCTTCCEEEEETTTCTTHHHHHHHCCCTTCEEEEEEECSSSCBCCCHHHHHHHHHHHHHHSCSSC
T ss_pred ECCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 60488763568888636798735788523851148898758755689754681478886999999999999997379200
Q ss_pred -------------------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------------------a 518 (897)
-
T Consensus 321 l~lspsCsLlh~P~~~~~e~~l~~~~~~~lafa~~k~~e~~~l~~~~~~~~~~~~~~~~~~~~~~r~~s~~~~n 394 (394)
T d1u1ha1 321 LVVSTSCSLLHTAVDLINETKLDDEIKSWMAFAAQKVVEVNALAKALAGQKDEALFSANAAALASRRSSPRVTN 394 (394)
T ss_dssp EEEEESSCGGGSCSCGGGCCSSCHHHHHTBCCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHCTTTCC
T ss_pred EEEECCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99938998767787174335799889845151999999999999997288308999999999998843887789
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=100.00 E-value=0 Score=29727.55 Aligned_cols=1 Identities=0% Similarity=-0.428 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~~~~p~~~~~~~~pf~i~~~~~~~~~l~~~l~~~r~~~~~~~~~~~~~~~g~~~~~~~~l~~~w~~~~dw~~~e~~ln 80 (394)
T d1qo7a_ 1 KAFAKFPSSASISPNPFTVSIPDEQLDDLKTLVRLSKIAPPTYESLQADGRFGITSEWLTTMREKWLSEFDWRPFEARLN 80 (394)
T ss_dssp CTTCCCCTTCCSCCCBCCCCCCHHHHHHHHHHHHHCCCCCCCTGGGCTTCTTSSCHHHHHHHHHHHHHTCCHHHHHHHHT
T ss_pred CCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 99788999897787364635899999999999984478997445677753459889999999998634389899999987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~f~~~i~G~~iHf~h~~~~~~~~~pLlLlHG~P~s~~~w~~vi~~La~~g~~~~~~f~VIaPDLpG~G~S~~P~~~~ 160 (394)
T d1qo7a_ 81 SFPQFTTEIEGLTIHFAALFSEREDAVPIALLHGWPGSFVEFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPPLDK 160 (394)
T ss_dssp TSCEEEEEETTEEEEEEEECCSCTTCEEEEEECCSSCCGGGGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCCCSSS
T ss_pred CCCCEEEEECCEEEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC
T ss_conf 68975999879888999972258998779993665411899999887641135776550444345424347889998777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~y~~~~~a~~~~~l~~~lg~~~~~~vg~~~Gg~v~~~~a~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (394)
T d1qo7a_ 161 DFGLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNLCAMRAPPEGPSIESLSAAEKEGIARME 240 (394)
T ss_dssp CCCHHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCCSCSSSCCGGGSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 65788999999998764047624899840765178999887512521015764034322344321000135677888777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~ 320 (394)
T d1qo7a_ 241 KFMTDGLAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSETILEMVSLYWLTESFPRAIHTYRETTPTAS 320 (394)
T ss_dssp HHHHHSCHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHSCSSCCCHHHHHHHHHHHHHTTCHHHHGGGHHHHCC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
T ss_conf 77775555555430125555432024520046677787642244568879999999987500132056799999842235
Q ss_pred -------------------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------------------a 518 (897)
=
T Consensus 321 ~~~~~~~~~~~~~i~vPtlv~~g~~D~~~~p~~~~~~~~~~~~~~~~~~~GHf~~~E~Pe~~a~~I~~Fl~~v~ 394 (394)
T d1qo7a_ 321 APNGATMLQKELYIHKPFGFSFFPKDLCPVPRSWIATTGNLVFFRDHAEGGHFAALERPRELKTDLTAFVEQVW 394 (394)
T ss_dssp ------CTTTTTCEEEEEEEEECTBSSSCCCHHHHGGGEEEEEEEECSSCBSCHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCEEEEECCCCCCCHHHHCHHHHHHHHHHHHHHHC
T ss_conf 66222321237840687589980888532589999864684699985994781478699999999999999759
|
| >d1q8ia2 e.8.1.1 (A:390-783) Family B DNA polymerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: DNA/RNA polymerases superfamily: DNA/RNA polymerases family: DNA polymerase I domain: Family B DNA polymerase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29721.05 Aligned_cols=1 Identities=0% Similarity=-1.623 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~y~Gg~V~~p~~G~~~~v~~lDf~SLYPsii~~~Ni~p~t~v~~~~~~~~~~~~~~~~~~~~~~~~g~lp~~ 80 (394)
T d1q8ia2 1 NLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIVRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEI 80 (394)
T ss_dssp CTTCSCCCCCCCCCCBCCCCEEEEEEEEEEETTHHHHHHHHHCCCHHHHHHHHHSCSTTTEEECSTTCEEESSSCSHHHH
T ss_pred CCCCCCCCCCCCCEECCCCCCCCCCEEEEECCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHH
T ss_conf 99888998899837837999757885588831127999999679965437877678876555786543332001178999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 l~~l~~~R~~~K~~~~d~~Q~a~Ki~~NS~YG~~g~~~~~~~~~~~A~~iT~~Gr~~i~~~~~~~e~~g~~ViygDTDSi 160 (394)
T d1q8ia2 81 VTNIWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDVIYGDTDST 160 (394)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEECSSEE
T ss_pred HHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 99999742100002321024789871221206002455521136788889888589999988631223466650356418
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~E~~~~~~~~~~kk~~~~~~kkrY~g~~~~~~~~~~ 240 (394)
T d1q8ia2 161 FVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGLIQEGDKQRM 240 (394)
T ss_dssp EEECSSCCCHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCEEEEEEEEEEEECCCCTTCTTCCSCEEEEEEETTEEEE
T ss_pred EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHEEEEHHHHHHHHHHHHHHHCCEEECCCCEE
T ss_conf 99947971245677889999998877656676665113432002553200000022112113234433000011233247
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~KG~e~vRrd~~~~~k~~~~~vl~~i~~~~~~~e~vk~~~~~l~~~~i~~~~i~~~~l~k~~~~y~~~~~~hV~~a~~~ 320 (394)
T d1q8ia2 241 VFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLA 320 (394)
T ss_dssp EEESSCC--CCCCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTTTTGGGGCC-------------------------
T ss_pred EEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHEEEEECCCCCCCCCCCCHHHHHHHHH
T ss_conf 88750014666662677898989999963626888899999987605877045044543156000356787699999999
Q ss_pred -------------------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------------------a 518 (897)
=
T Consensus 321 ~~~~~~~~~~~~~~~g~~i~Yv~~~~~~~~~~~~~~~iD~~yYi~~qi~~~~~ril~~~~~~~~~~~~~~~~LF 394 (394)
T d1q8ia2 321 DEENQKRGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLGLF 394 (394)
T ss_dssp -----------------------------------CCCCHHHHHHHTHHHHHHTTGGGGTCCHHHHHHHHHCC-
T ss_pred HHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCC
T ss_conf 98766327988899898679999899986577548998789999974089999998762788999974686889
|
| >d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Cystalysin species: Treponema denticola [TaxId: 158]
Probab=100.00 E-value=0 Score=29723.30 Aligned_cols=1 Identities=0% Similarity=-0.924 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~f~~~~~r~~~~s~k~~~~~~~~~~~g~~vi~l~~g~pdf~~p~~v~~al~~~~~~~~~~Y~~g~~~Lr~aia~~~~ 80 (394)
T d1c7na_ 1 MIYDFTTKISRKNLGSLKWDLMYSQNPEVGNEVVPLSVADMEFKNPPELIEGLKKYLDETVLGYTGPTEEYKKTVKKWMK 80 (394)
T ss_dssp CCCCSCCCCCCTTTTBHHHHHHHHHCTTCCTTCCCCCSSSCSSCCCHHHHHHHHHHHHHCCCSSBCCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 97678977677999878899999876754997688327997999889999999999857886899987999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~g~~~~~~~I~vt~G~~~al~~~~~~~~~pgd~vi~~~p~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~d~~~~~~~~ 160 (394)
T d1c7na_ 81 DRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLS 160 (394)
T ss_dssp HHHCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHH
T ss_pred HHCCCCCCCCCEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 85599888750476334212343321034444332333467662046677654300222222245655540255666553
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~i~l~~P~NPTG~v~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~ 240 (394)
T d1c7na_ 161 KDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTF 240 (394)
T ss_dssp TCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHH
T ss_pred CCCCCEEEEECCCCCCCCEECCHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCC
T ss_conf 04563299945523565412569995343203454320586145532124588666410111002311103234542001
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~G~R~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 320 (394)
T d1c7na_ 241 NIAGMGMSNIIIKNPDIRERFTKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAP 320 (394)
T ss_dssp TCGGGCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCC
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEC
T ss_conf 22222322223567033445555543003443222221024554200144301311121012321000121256530422
Q ss_pred -------------------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~p~g~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~~~iRis~~~~~e~i~eal~rl~~~l~~Lk 394 (394)
T d1c7na_ 321 LIEGTYLQWIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAPSSVIQESLERLNKALKDLK 394 (394)
T ss_dssp CCSBSSEEEEECGGGCCCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEEEECCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCC
T ss_conf 78950489897888899999999999986999997423418899987999995899999999999999999639
|
| >d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: p450 monoxygenase OxyB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=0 Score=29722.73 Aligned_cols=1 Identities=0% Similarity=-1.424 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~p~~~~~~~~dp~~~lr~~~p~~~~~~~~~~~~~~~w~vt~~~dv~~Vl~d~~~f~s~~~~~~~~~~~~~~~~~~~~~ 80 (394)
T d1lfka_ 1 DPRPLHIRRQGLDPADELLAAGALTRVTIGSGADAETHWMATAHAVVRQVMGDHQQFSTRRRWDPRDEIGGKGIFRPREL 80 (394)
T ss_dssp CCSCGGGCEETTEECHHHHTSCSEEEEC------CCCEEEECSHHHHHHHHHCTTTEEECTTCCC-------------CC
T ss_pred CCCCHHCCCCCCCCHHHHHHHCCEEEEECCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 98961104235995799997499058978888888668996799999999759864547765565444565433340432
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~ll~~Dg~~H~~~R~~l~~~fs~~~v~~~~~~i~~~~~~ll~~l~~~g~~~Dl~~~~~~~~~~~~~~~~~g~~~~~~~ 160 (394)
T d1lfka_ 81 VGNLMDYDPPEHTRLRRKLTPGFTLRKMQRMAPYIEQIVNDRLDEMERAGSPADLIAFVADKVPGAVLCELVGVPRDDRD 160 (394)
T ss_dssp TTCGGGCCTTHHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHCSSEEHHHHTTTTHHHHHHHHHHTCCGGGHH
T ss_pred CCCHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEEEECCCCCHHHHH
T ss_conf 34133048756899998854331999999998899999999986520268763025676541111021100475301389
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~i~~~r~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~ag~~tt~~~ 240 (394)
T d1lfka_ 161 MFMKLCHGHLDASLSQKRRAALGDKFSRYLLAMIARERKEPGEGMIGAVVAEYGDDATDEELRGFCVQVMLAGDDNISGM 240 (394)
T ss_dssp HHHHHHHHTTCTTSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHGGGSCHHHHHHHHHHHHHHTSHHHHHH
T ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 99998862233210037999999999999999999864002210000001013678989999999999998643205889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~e~~r~~~~~~~~~~r~~~~d~~~~g~~ip~G~~V~~~~~~~~rdp~~~~d 320 (394)
T d1lfka_ 241 IGLGVLAMLRHPEQIDAFRGDEQSAQRAVDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPD 320 (394)
T ss_dssp HHHHHHHHHHSGGGGGGGSSCHHHHHHHHHHHHHHHCCBSCCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTT
T ss_pred HHHHHHHHHCCHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCEEECCCCCEEECCCEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999875222045543101223332110000000023321012113567121483542687401232334679212667
Q ss_pred -------------------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------------------a 518 (897)
=
T Consensus 321 P~~F~PeR~~~~~lpFG~G~r~C~G~~lA~~e~~~~l~~Ll~~f~~~~l~~p~~~~~~~~~~~~~g~~~lpv~~ 394 (394)
T d1lfka_ 321 VDRLDVTREPIPHVAFGHGVHHCLGAALARLELRTVFTELWRRFPALRLADPAQDTEFRLTTPAYGLTELMVAW 394 (394)
T ss_dssp TTSCCTTSCCCCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSTTCCCEEECSSSBCEEEECEEEC
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEECCCCCCCCEEEEEEC
T ss_conf 33218899999988878987578069999999999999999967988778886766030687777870005359
|
| >d1atia2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Glycyl-tRNA synthetase (GlyRS) species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=29728.17 Aligned_cols=1 Identities=0% Similarity=-0.726 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~s~e~i~~l~KRRgFv~pS~EIYGGlaG~yDyGPlG~~LK~Ni~~~Ww~~fv~~~e~~~~id~~ii~p~~V~kASGHv 80 (394)
T d1atia2 1 AASSLDELVALCKRRGFIFQSSEIYGGLQGVYDYGPLGVELKNNLKQAWWRRNVYERDDMEGLDASVLTHRLVLHYSGHE 80 (394)
T ss_dssp CCCCHHHHHHHHHHTTSEEETTGGGTCCTTCEEECHHHHHHHHHHHHHHHHHHTTSCSSEEEEBCCSEEETTHHHHTSHH
T ss_pred CCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHCCCC
T ss_conf 93209999999984577415712226710155768427999999999999987540477777513344898886206787
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~F~D~mv~c~~~~~~~RaD~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~~g~~~~~t 160 (394)
T d1atia2 81 ATFADPMVDNRITKKRYRLDHLLKEQPEEVLKRLYRAMEVEEENLHALVQAMMQAPERAGGAMTAAGVLDPASGEPGDWT 160 (394)
T ss_dssp HHCEEEEEEC--------------------------------------------------------------------CC
T ss_pred CCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 88764420267777532022677665565543321134555666889999875476866525876178899889867767
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~FNLMF~T~iGp~~~~~~~~yLRPETAQGiFvnF~~~l~~~r~KlPFGiAQIGk~FRNEIsPr~~l~R~REF~q~Ei 240 (394)
T d1atia2 161 PPRYFNMMFQDLRGPRGGRGLLAYLRPETAQGIFVNFKNVLDATSRKLGFGIAQIGKAFRNEITPRNFIFRVREFEQMEI 240 (394)
T ss_dssp CCEEEECBEEEECSSCCCGGGEEEECSSSHHHHHHTHHHHHHHHTCCSSEEEEEEEEEEBCCSSCCTGGGSCSEEEEEEE
T ss_pred CCCHHHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 50022100012323345656336777013069999799999971567880112432211466376557756332212026
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 E~Fv~P~~~~~~~~yw~~~~~~f~~~lGi~~~~lrfrqh~~~ElAHYa~~~~DiE~~fp~Gw~El~GiA~RtdyDL~~H~ 320 (394)
T d1atia2 241 EYFVRPGEDEYWHRYWVEERLKWWQEMGLSRENLVPYQQPPESSAHYAKATVDILYRFPHGSLELEGIAQRTDFDLGSHT 320 (394)
T ss_dssp EEEECGGGHHHHHHHHHHHHHHHHHHTTCCGGGEEEEECCTTTSCTTCSEEEEEEEEETTEEEEEEEEEECTTHHHHHHC
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHCCCCEEEEEEECCCCCEECHHHHCCCHHHHHHHH
T ss_conf 89981785157788899999999998368833336775052355540545278999669985840413143121478776
Q ss_pred -------------------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------------------a 518 (897)
=
T Consensus 321 k~~~~~~~~~~~~~~~~s~~~l~~~d~~~~~~~iPhVIEPS~GldR~~la~L~~ay~eee~~~~e~R~vLkl~P 394 (394)
T d1atia2 321 KDQEALGITARVLRNEHSTQRLAYRDPETGKWFVPYVIEPSAGVDRGVLALLAEAFTREELPNGEERIVLKLKP 394 (394)
T ss_dssp SSTTTTTCCSCCCCCSCCCSCCCEECSSSCCEECCEEEEEEEEHHHHHHHHHHHHEEEEECTTSCEEEEECCCG
T ss_pred HHCCCCCHHHHHHCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf 42033202344312777663467880678907850178758882189999999876434227997259983599
|
| >d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Yeast (Candida albicans) [TaxId: 5476]
Probab=100.00 E-value=0 Score=29722.38 Aligned_cols=1 Identities=0% Similarity=-0.660 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~rGvNlGgwlv~E~w~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~~~~~~~h~~~~it~~D~~~i~~~ 80 (394)
T d2pb1a1 1 AWDYDNNVIRGVNLGGWFVLEPYMTPSLFEPFQNGNDQSGVPVDEYHWTQTLGKEAALRILQKHWSTWITEQDFKQISNL 80 (394)
T ss_dssp CCCTTTCCEEEEECTTSSSCCTTTCGGGTGGGCBTTBCTTSCCSHHHHHHHHCHHHHHHHHHHHHHHSSCHHHHHHHHHT
T ss_pred CCCCCCCEEEEEECCHHHCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHC
T ss_conf 97888977898864334305765583344313677765443201888998739687999999998604889999999977
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 G~N~VRiPv~~~~~~~~~~~~~~~~~~~~ld~~i~~a~~~gl~VilDlH~~pg~~~~~~~~g~~~~~~~~~~~~~~~~~~ 160 (394)
T d2pb1a1 81 GLNFVRIPIGYWAFQLLDNDPYVQGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRDSYNFQNGDNTQVTLN 160 (394)
T ss_dssp TCCEEEEEEEGGGTCCCTTCCCCCCHHHHHHHHHHHHHHTTCEEEEEEEECTTCSSCCGGGSSTTCCCTTSTTHHHHHHH
T ss_pred CCCEEEEEECHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 99889998027884488877552368999999999999799189998511588666767767667644366779999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~ia~~~~~~~~~~~v~g~el~NEP~~~~~~~~~~~~~~~~~~~~IR~~~~~~~I~i~~~~~~~~~~~~~~~~~~~~~ 240 (394)
T d2pb1a1 161 VLNTIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAFQVFGYWNNFLTVAEGQW 240 (394)
T ss_dssp HHHHHHHHHSSGGGTTTEEEEESCSCCCGGGSCHHHHHHHHHHHHHHHHHTTCCCCEEEECTTCCTTTTTTSSCGGGTCC
T ss_pred HHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHCCCCCCCC
T ss_conf 99999999715887770688741356786654378999999999999997389976998488755344444315788886
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~vv~d~H~Y~~f~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ge~s~~~~d~~~~~~~~~~~~~~~g~~~~~~~~Ge~ 320 (394)
T d2pb1a1 241 NVVVDHHHYQVFSGGELSRNINDHISVACNWGWDAKKESHWNVAGEWSAALTDCAKWLNGVNRGARYEGAYDNAPYIGSC 320 (394)
T ss_dssp SEEEEEECCSCSSHHHHTCCHHHHHHHHHHHHHHHHTCSSEEEEEECCSCSSCCSTTTTCTTCCCTTBTCSTTCCBCCCS
T ss_pred EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 27985311434678655689888787663034555315676120201023005666623655342214654787655646
Q ss_pred -------------------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~d~~~~~~~~~~~~r~~~~aQ~~~~e~~~GW~fWt~K~~~~~~W~~~~~~~~G~iP~~~~~~~~~~~c~~~ 394 (394)
T d2pb1a1 321 QPLLDISQWSDEHKTDTRRYIEAQLDAFEYTGGWVFWSWKTENAPEWSFQTLTYNGLFPQPVTDRQFPNQCGFH 394 (394)
T ss_dssp GGGSSGGGCCHHHHHHHHHHHHHHHHHHHTTTEEEESCSCCSSCGGGCHHHHHHTTCSCSSTTCCSSTTSSCCC
T ss_pred CCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCHHCCCCCCCCCC
T ss_conf 66567101678899999999999999985279678963016999988889998788969991323688888999
|
| >d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus sp. 707 [TaxId: 1416]
Probab=100.00 E-value=0 Score=29718.34 Aligned_cols=1 Identities=0% Similarity=-1.390 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~q~f~w~~~~~g~~~~~i~~kLdyL~~LGv~aIwL~Pi~~~~~~~~~gY~~~~~yd~~~~~~~~~vd~~~Gt~~d 80 (394)
T d2d3na2 1 TNGTMMQYFEWYLPNDGNHWNRLNSDASNLKSKGITAVWIPPAWKGASQNDVGYGAYDLYDLGEFNQKGTVRTKYGTRSQ 80 (394)
T ss_dssp CCCCEEECCCTTCCSSSCHHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSCSEEETTCSSCSCBTTBSSBTTBCHHH
T ss_pred CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 98627887742657889719999998999997199989979570178878889786667554434446776888999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 f~~Lv~~aH~~GIkVilDvV~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (394)
T d2d3na2 81 LQAAVTSLKNNGIQVYGDVVMNHKGGADATEMVRAVEVNPNNRNQEVTGEYTIEAWTRFDFPGRGNTHSSFKWRWYHFDG 160 (394)
T ss_dssp HHHHHHHHHHTTCEEEEEECCSEECSCSEEEEEEEEEEETTEEEEECSCCEEEEEEEEBCCTTTTTSSCCCCBCGGGEEE
T ss_pred HHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999999987998999971266567664310012235765433334564443444345676556778765444445787
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~np~V~~~~~~~~~~w~~~~giDGfR~D~a~~~~~~ 240 (394)
T d2d3na2 161 VDWDQSRRLNNRIYKFRGHGKAWDWEVDTENGNYDYLMYADIDMDHPEVVNELRNWGVWYTNTLGLDGFRIDAVKHIKYS 240 (394)
T ss_dssp ESCCTTTCCSSCEEEECSTTCCCCSSCCCTTSCCCCCSSEEECTTCHHHHHHHHHHHHHHHHHHTCSEEEETTGGGSCHH
T ss_pred CCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHH
T ss_conf 65556668888754006888765666652323420267762155888998788876565420567314774224437767
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~gE~~~~~~~~~~~~~~~~~~~~~~~df~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~ 320 (394)
T d2d3na2 241 FTRDWINHVRSATGKNMFAVAEFWKNDLGAIENYLQKTNWNHSVFDVPLHYNLYNASKSGGNYDMRNIFNGTVVQRHPSH 320 (394)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCCCSCHHHHHHHHHHTTTCSEEECHHHHHHHHHHHHTTTCSCGGGTTTTCHHHHCGGG
T ss_pred HHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHCCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHH
T ss_conf 89999999987408740210212366632120010033442111037899999999840760539998721511069868
Q ss_pred -------------------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------------------a 518 (897)
=
T Consensus 321 ~v~fl~NHD~~r~~~~~~~~~~~~~~la~a~~l~~~pGiP~iyyGdE~G~~~~~~p~~r~~~~~l~~~r~~~~~ 394 (394)
T d2d3na2 321 AVTFVDNHDSQPEEALESFVEEWFKPLAYALTLTREQGYPSVFYGDYYGIPTHGVPAMRSKIDPILEARQKYAY 394 (394)
T ss_dssp EEECSCCTTTSTTSTTCCCCCTTTHHHHHHHHHSSSSSEEEEEHHHHHCBGGGTBCCCHHHHHHHHHHHHHTCC
T ss_pred EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 05767288686524455673199999999999984999679972672098998895548999999999998479
|
| >d1ldja2 a.118.17.1 (A:17-410) Cullin homolog 1, Cul-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Cullin repeat-like family: Cullin repeat domain: Cullin homolog 1, Cul-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=29725.98 Aligned_cols=1 Identities=0% Similarity=-1.091 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~d~~W~~L~~ai~~I~~~~~~~~~~~~~lY~~vy~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~LY~~l~~~l 80 (394)
T d1ldja2 1 LDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVHQSNQARGAGVPPSKSKKGQTPGGAQFVGLELYKRLKEFL 80 (394)
T ss_dssp CHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHTCCC----------------------------TTHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 96349999999999986699997999999999999994487432000111101121000121025457999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~l~~i~~~~~~~~~~~~L~~~~~~W~~~~~~~~~l~~if~YLdr~yv~~~~~~~~~~~~~I~~~~l~~fr~~v~~~~~ 160 (394)
T d1ldja2 81 KNYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRDCLFRPLN 160 (394)
T ss_dssp HHHHHHHHHTTCSCTTTTHHHHHHHHHHHHHHHHHHHHHHTHHHHHHSSSCCC-------CCHHHHHHHTTHHHHTTTTT
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999877437879999999999999999999999999886689988604445666541999999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~l~~~il~~I~~~R~g~~i~~~li~~~i~~l~~l~~~~~~~~~~~~~~~~Y~~~FE~~~L~~t~~~Y~~~~~~~l~~~~ 240 (394)
T d1ldja2 161 KQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNP 240 (394)
T ss_dssp THHHHHHHHHHTTTSCCTTCCTHHHHHHHHHHHHTSCCSSSSSCSSCCCHHHHHHTHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999998678966699999999999994832323330132278878998999999999999999999998498
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~eYl~~v~~~l~eE~~r~~~yl~~~t~~~l~~~l~~~LI~~~~~~l~~~~~~ll~~~~~~~L~~lY~L~~rv~~~~~~l 320 (394)
T d1ldja2 241 VTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHLEIFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGEL 320 (394)
T ss_dssp TTSSHHHHHHHHHHHHHTTTTTTCSSSSHHHHHHHHHHHSSSSSHHHHHHHHHHHHSCCTTHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHH
T ss_conf 35899999999999999999746864699999999999999999999999999987165889999999986553518999
Q ss_pred -------------------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~I~~~G~~~i~~~~~~~~~~~~~~V~~ll~l~~~~~~ii~~~F~~d~~f~~~l~~af~~fiN~n~~~~ 394 (394)
T d1ldja2 321 KKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTK 394 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSGGGCHHHHHHHHHHHHHHHHHHHHTTTTTCHHHHHHHHHHHHHHHHSSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999999997233114578689999999999999999999859988999999999999837666689
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=0 Score=29645.81 Aligned_cols=1 Identities=0% Similarity=-0.692 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~ 80 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE 80 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCHH
T ss_conf 99899989984899999999997859899994677542211012111343321577887777622797079983078999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~~~ 160 (393)
T d1i24a_ 81 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGY 160 (393)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSSE
T ss_pred HHHHHHHHHCCHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCC
T ss_conf 99999975110120012342101232222222222333223354078999998431242011012111223356643233
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i 240 (393)
T d1i24a_ 161 ITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTAL 240 (393)
T ss_dssp EEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHH
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 32222235555542135455777775310012111223310233310123112777654555542223555445655300
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~~~~~~~~~ 320 (393)
T d1i24a_ 241 NRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLDVKK 320 (393)
T ss_dssp HHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTTTCCCCE
T ss_pred HHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHCCCCCE
T ss_conf 15667764497268852012223455333337789998874034330466437898067999999999998761987524
Q ss_pred ------------------------------------------------------------------------E
Q ss_conf ------------------------------------------------------------------------8
Q 002647 518 ------------------------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------------------------a 518 (897)
+
T Consensus 321 ~~~~~~~~~~~~~~~~~d~~k~~~LGw~P~~~~~~~i~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (393)
T d1i24a_ 321 MTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDSLLNFAVQFKDRVDTKQIMPSVSWKKIGVKTKSMT 393 (393)
T ss_dssp EEECCSSCSCSSCCCCBCCCHHHHTTCCCCCCCHHHHHHHHHHHHHTGGGCCGGGSSCCCCTTTCCSSCCCC-
T ss_pred EECCCCCCCCCCCEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCC
T ss_conf 5646899889866763789999974994056999999999999999887501764588888750011224669
|
| >d1n8pa_ c.67.1.3 (A:) Cystathionine gamma-lyase (CYS3) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Cystathionine gamma-lyase (CYS3) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=29650.00 Aligned_cols=1 Identities=0% Similarity=0.072 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 t~~~~~~f~T~~vHag~~~d~~gav~pPI~~ssTf~~~~~~~~~~~y~YsR~gnPT~~~lE~~la~LE~~~~a~~~sSGm 80 (393)
T d1n8pa_ 1 TLQESDKFATKAIHAGEHVDVHGSVIEPISLSTTFKQSSPANPIGTYEYSRSQNPNRENLERAVAALENAQYGLAFSSGS 80 (393)
T ss_dssp CCCSSCCHHHHHHHTTCCCCSSCCSSCCBCCCSBCCBSSSSSBSSSCCBTTTCCHHHHHHHHHHHHHTTCSEEEEESCHH
T ss_pred CCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCH
T ss_conf 99878981042077898899898826882788765138864535773353899868999999999971995488834701
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 aAi~~~l~~l~~gd~iv~~~~~yg~t~~~~~~~l~~~gi~~~~~~~~~~~~~~~i~~~t~lv~~EspsNP~l~v~Di~~i 160 (393)
T d1n8pa_ 81 ATTATILQSLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTNDLLNDLPQLIKENTKLVWIETPTNPTLKVTDIQKV 160 (393)
T ss_dssp HHHHHHHHTSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEESSHHHHHHHHSCSSEEEEEECSSCTTTCCCCCHHHH
T ss_pred HHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCEEEECCCCHHHHHCCCHHHH
T ss_conf 67776653035798344322001340344454541255225885135689999851201346723763234320203555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 a~~a~~~~~~~g~~lvVDnT~atP~~~~Pl~~GADiVvhS~TKyi~GhsDv~~G~v~~~~~~~~~~l~~~~~~~G~~~~p 240 (393)
T d1n8pa_ 161 ADLIKKHAAGQDVILVVDNTFLSPYISNPLNFGADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSP 240 (393)
T ss_dssp HHHHHHHTTTTTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCH
T ss_pred HHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHCCCEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCH
T ss_conf 54444201467845998567447044770541898999816644579886026301102166999999998643888986
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~a~ll~rgl~Tl~lR~~~~~~nA~~lA~~L~~~~~~V~~V~yP~l~~~~~~~~a~~~~~~~~~G~~~sf~l~~~~~~~~ 320 (393)
T d1n8pa_ 241 FDAWLTHRGLKTLHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAAS 320 (393)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCHHHHH
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCCEEEEEEECCHHHHH
T ss_conf 88999982775034679999998888999997336727997302334543200222103457877148999959999999
Q ss_pred ------------------------------------------------------------------------E
Q ss_conf ------------------------------------------------------------------------8
Q 002647 518 ------------------------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~f~~~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~~~r~~~gi~~~liRlSvGlE~~~DLi~Dl~~AL~~a~~ 393 (393)
T d1n8pa_ 321 KFASSTRLFTLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQATN 393 (393)
T ss_dssp HHHHHCSSSEECSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHCCCCEECCCCCCCCCEEECCHHHCCCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_conf 9997188443561677757147376022542289999996598949799986528999999999999999649
|
| >d1xlma_ c.1.15.3 (A:) D-xylose isomerase {Arthrobacter, strain b3728 [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Xylose isomerase-like family: Xylose isomerase domain: D-xylose isomerase species: Arthrobacter, strain b3728 [TaxId: 1663]
Probab=100.00 E-value=0 Score=29647.92 Aligned_cols=1 Identities=0% Similarity=-0.991 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~p~~~~~f~~~~Wt~~~~g~dpFG~~t~~~~d~~~~~~~~~~lG~~~~~fHd~D~~p~~~~~~e~~~~~~~~k~~l~~~ 80 (393)
T d1xlma_ 1 VQPTPADHFTFGLWTVGWTGADPFGVATRKNLDPVEAVHKLAELGAYGITFHDNDLIPFDATEAEREKILGDFNQALKDT 80 (393)
T ss_dssp CCCCGGGCEEEEHHHHTCCCCBTTBCCCSCCCCHHHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 99984456417886146678899898878899999999999981998880352334888998788999999999999853
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 Gl~l~~~t~nlf~~p~~~~Ga~tnPD~~VR~~Ai~~~k~~idia~~LGa~~~v~W~G~~G~~~~~~~d~~~~~~~l~e~l 160 (393)
T d1xlma_ 81 GLKVPMVTTNLFSHPVFKDGGFTSNDRSIRRFALAKVLHNIDLAAEMGAETFVMWGGREGSEYDGSKDLAAALDRMREGV 160 (393)
T ss_dssp TCEEEEEECCCSSSGGGTTCSTTCSSHHHHHHHHHHHHHHHHHHHHHTCSEEEECCSSSEESSGGGCCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 98110223664334355437756959999999999999999999996898499736888677777658999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~v~~~a~~~g~~~~~~IEpKP~EP~~~~~~~~~~~~l~fl~~~~~~~~~gvnlD~gH~~lag~~~~~~va~a~~~gkLg 240 (393)
T d1xlma_ 161 DTAAGYIKDKGYNLRIALEPKPNEPRGDIFLPTVGHGLAFIEQLEHGDIVGLNPETGHEQMAGLNFTHGIAQALWAEKLF 240 (393)
T ss_dssp HHHHHHHHHHTCSCEEEECCCSCSSSSEESSCSHHHHHHHHTTCTTGGGEEECCBHHHHHTTTCCHHHHHHHHHHTTCBC
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHCCCCHHHHHHHHHHCCCCE
T ss_conf 99999898629885698611677775554037599999999980894204575204524441577078898998669730
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~vh~Nd~~~~~~D~Dl~~gs~~~~~~~~~~~~l~~g~~~g~~~y~G~~~fD~~~~r~~~~e~~~~~~~~~~~~~~~l~~~ 320 (393)
T d1xlma_ 241 HIDLNGQRGIKYEQELVFGHGDLTSAFFTVDLLENGFPNGGPKYTGPRHFDYKPSRTDGYDGVWDSAKANMSMYLLLKER 320 (393)
T ss_dssp CCEECBCCSSSSCCCBCTTSSCHHHHHHHHHHHHHCCTTCCCCCCSCEEECCCCCTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 24426787666666677885469999999999953664678787775588722667887306999999999999999999
Q ss_pred ------------------------------------------------------------------------E
Q ss_conf ------------------------------------------------------------------------8
Q 002647 518 ------------------------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------------------------a 518 (897)
-
T Consensus 321 A~~l~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~e~L~q~~~~~l~g~~ 393 (393)
T d1xlma_ 321 ALAFRADPEVQEAMKTSGVFELGETTLNAGESAADLMNDSASFAGFDAEAAAERNFAFIRLNQLAIEHLLGSR 393 (393)
T ss_dssp HHHHHHCHHHHHHHHHHTTTGGGSCSSCTTCCHHHHHTCGGGTTTCCHHHHTTCCCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHCCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCC
T ss_conf 9997519999999986565021045543899889999788753699845552232689999999999970489
|
| >d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: A4 beta-galactosidase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=29646.78 Aligned_cols=1 Identities=0% Similarity=-1.091 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~p~~~~~~~~~~D~~~~~~~G~n~vR~~i~~W~~iep~~G~~~~~~~d~~i~~~~~~Gi~~iv~l~~~~~P~w~ 80 (393)
T d1kwga2 1 MLGVCYYPEHWPKERWKEDARRMREAGLSHVRIGEFAWALLEPEPGRLEWGWLDEAIATLAAEGLKVVLGTPTATPPKWL 80 (393)
T ss_dssp CEEEECCGGGSCHHHHHHHHHHHHHHTCCEEEECTTCHHHHCSBTTBCCCHHHHHHHHHHHTTTCEEEEECSTTSCCHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHH
T ss_conf 94763584549999999999999982999899555346531888992687999999999998799999976777775343
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~~~~~~~~~~~~~~~~~~~ 160 (393)
T d1kwga2 81 VDRYPEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLLAERYGGLEAVAGFQTDNEYGCHDTVRCYCPRCQEAFR 160 (393)
T ss_dssp HHHCGGGSCBCTTSCBCCSSSSCCCCTTCHHHHHHHHHHHHHHHHHHTTCTTEEEEECSSSTTTTTTSCCCSHHHHHHHH
T ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHH
T ss_conf 21486501245778504666666667799999999999999998771688537887403555655775443167777778
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (393)
T d1kwga2 161 GWLEARYGTIEALNEAWGTAFWSQRYRSFAEVELPHLTVAEPNPSHLLDYYRFASDQVRAFNRLQVEILRAHAPGKFVTH 240 (393)
T ss_dssp HHHHHHHSSHHHHHHHHTTTGGGCCCSSGGGCCCSCSCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 88887665299999876530022223676545676555555662565899998777677787889875421465555435
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~d~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 320 (393)
T d1kwga2 241 NFMGFFTDLDAFALAQDLDFASWDSYPLGFTDLMPLPPEEKLRYARTGHPDVAAFHHDLYRGVGRGRFWVMEQQPGPVNW 320 (393)
T ss_dssp EECTTCCSSCHHHHGGGSSSEEEEECHHHHHHHSCCCHHHHHHTTTTCCTTHHHHHHHHHHHHTTTCEEEEEECCSCCSS
T ss_pred CCCCCCCCCCHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCC
T ss_conf 55566656423331256652121355555445566784223444446881688999999997347987036513666666
Q ss_pred ------------------------------------------------------------------------E
Q ss_conf ------------------------------------------------------------------------8
Q 002647 518 ------------------------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~~~~~~~~~~~~aia~G~~~~gy~~W~~~~~~~E~~~~gL~~~d~~p~~~~~~~~~~~~~l~~~~~~ 393 (393)
T d1kwga2 321 APHNPSPAPGMVRLWTWEALAHGAEVVSYFRWRQAPFAQEQMHAGLHRPDSAPDQGFFEAKRVAEELAALALP 393 (393)
T ss_dssp SSSCCCCCTTHHHHHHHHHHHTTCSCEEEECSBCCSSSTTTTSCCSBCTTSCBCHHHHHHHHHHHHHHTCCCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 6468889867999999999977998889857557889750010014078899578999999999999974499
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=29646.38 Aligned_cols=1 Identities=100% Similarity=3.095 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
|
T Consensus 1 ~~~~~~~~~~~~H~~~I~~v~~~~~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (393)
T d1sq9a_ 1 KVFIATANAGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELC 80 (393)
T ss_dssp CEEEEEEEESSCSSSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEE
T ss_pred CCEEEEEECCCCCCCCCEEEEEECCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCC
T ss_conf 91582452087636712799996999999979996998789878877654046765420477167666750015799876
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~s~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~ 160 (393)
T d1sq9a_ 81 LVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADES 160 (393)
T ss_dssp EEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHH
T ss_pred EEEEEECCCCEEEEECCCCCCEEEEECCCCCEEEECCCCCCEEEEEEECCCCCCCCCEEEEECCCCCEEEEEEECCCCCC
T ss_conf 89999489919999822898205651245632431157896689998447886542179998389819998740477534
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~s 240 (393)
T d1sq9a_ 161 NSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFS 240 (393)
T ss_dssp HHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEEC
T ss_pred CEEEEEECCCEECCCCEECCCCCCCCEEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCC
T ss_conf 10233103200014510002578986789997899989999389829998602332110000111112425638770046
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 pdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~ 320 (393)
T d1sq9a_ 241 PQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKT 320 (393)
T ss_dssp SSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred CCCCEEEEECCCCCCCEEEECCCCCCEEEEEECCCCCCCCCEEEEECCCCCEEEECCCCCCCEEEEECCCCEEEEEECCC
T ss_conf 65320112428988421001035321344431156666431023202358666001389888069877999899999999
Q ss_pred ------------------------------------------------------------------------E
Q ss_conf ------------------------------------------------------------------------8
Q 002647 518 ------------------------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------------------------a 518 (897)
|
T Consensus 321 g~~~~~l~gH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ir~~~~~g 393 (393)
T d1sq9a_ 321 KERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 393 (393)
T ss_dssp TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred CCEEEEECCCCCCCCCCCCEEEECCCCCEEEECCCCEEEECCCCCEECCCCCCCCEEEEEECCCEEEEEECCC
T ss_conf 9799999886876137734899999999999831246998866766312368899799999199089990899
|
| >d1g8ma2 c.97.1.4 (A:201-593) AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Cytidine deaminase-like superfamily: Cytidine deaminase-like family: AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC domain: AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=100.00 E-value=0 Score=29646.85 Aligned_cols=1 Identities=0% Similarity=-0.792 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 g~~~~~LRYGENPHQ~aA~~~~~~~~~~~~~l~gk~SyNN~lD~daA~~lv~ef~~~~~~Pa~vIiKH~NPCGvAi~~~~ 80 (393)
T d1g8ma2 1 GVSQLPLRYGMNPHQSPAQLYTTRPKLPLTVVNGSPGFINLCDALNAWQLVKELKQALGIPAAASFKHVSPAGAAVGIPL 80 (393)
T ss_dssp TTTEEEESCSSSTTSCCEEEECSSSSCSEEEEESCCCHHHHHHHHHHHHHHHHHHHHHCSCEEEEEETTEEEEEEECCCC
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHCCCCC
T ss_conf 99879887976805411386216874316886687027679889999999997465059976999768883366508551
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~e~~~~~~~~~~~~~~~~~l~~Ay~~A~~~DP~SAFGGIIa~N~~vd~~~A~~i~~~F~EvIIAP~f~~eAleiL~~KKN 160 (393)
T d1g8ma2 81 SEEEAQVCMVHDLHKTLTPLASAYARSRGADRMSSFGDFIALSDICDVPTAKIISREVSDGVVAPGYEEEALKILSKKKN 160 (393)
T ss_dssp CHHHHHHTTCTTTGGGCCHHHHHHHHHHHSCTTTTTTEEEEESSCBCHHHHHHHHTSCEEEEEESCBCHHHHHHHHHGGG
T ss_pred HHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHCCEEEEECCCCCCCHHHHHHHCCCCHHCCCCCCHHHHHHHHHCCC
T ss_conf 02332000012211346629999999871485100050788615533210243222020100113455677888742545
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 lRll~~~~~~~~~~~~~~~r~i~gg~L~Q~~d~~~~~~~~~~~v~~~~~~pt~~e~~dL~FAwkVvK~vKSNAIvlak~~ 240 (393)
T d1g8ma2 161 GGYCVLQMDPNYEPDDNEIRTLYGLQLMQKRNNAVIDRSLFKNIVTKNKTLPESAVRDLIVASIAVKYTQSNSVCYAKDG 240 (393)
T ss_dssp GTCEEEEECTTCCCCSEEEEEETTEEEEEECCCCCCSGGGGCCBCSSSCCCCHHHHHHHHHHHHHHHTSCSSCEEEEETT
T ss_pred CCHHHHCCCCCCCCCCCCEEEEECCEEECCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 21343024644577666367750531110123332455551343202345168899999999999862366458996298
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~tvGIGaGQ~SRVdsv~iA~~KA~~~~~r~~p~v~~~~~k~~~~~~e~~na~~~~~~~~~~~~e~~~~~~~~f~~~~~~l 320 (393)
T d1g8ma2 241 QVIGIGAGQQSRIHCTRLAGDKANSWWLRHHPRVLSMKFKAGVKRAEVSNAIDQYVTGTIGEDEDLVKWQAMFEEVPAQL 320 (393)
T ss_dssp EEEEEECSCSCHHHHHHHHHHHHHHHHHTTCHHHHTCEECTTCCHHHHHHHHHHHHHTCSCSTHHHHHHHTTEEECCCCC
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHH
T ss_conf 68831899765478999999999887764063011000000134555541677651354332035566655420143112
Q ss_pred ------------------------------------------------------------------------E
Q ss_conf ------------------------------------------------------------------------8
Q 002647 518 ------------------------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------------------------a 518 (897)
=
T Consensus 321 ~~~~~~~~~~~~~g~vlASDAFFPF~D~ie~aa~~Gv~aIiQPGGSirD~evI~aan~~~i~M~fTg~RhF~H 393 (393)
T d1g8ma2 321 TEAEKKQWIAKLTAVSLSSDAFFPFRDNVDRAKRIGVQFIVAPSGSAADEVVIEACNELGITLIHTNLRLFHH 393 (393)
T ss_dssp CHHHHHHHHTTCCCEEEEESSCCSSTHHHHHHHTTTEEEEEEECCCTTHHHHHHHHHHHTCEEEEESCCCCCC
T ss_pred HHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCEEEECCCCCCCC
T ss_conf 3788764430357857980268687568999998599399879874251999999998598899878867288
|
| >d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=0 Score=29642.74 Aligned_cols=1 Identities=0% Similarity=-0.161 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~f~w~~~~~~~~~~~i~~kLdyLk~LGv~aI~L~Pi~~~~~~~~~GY~~~d~y~~~~~~~~~~vd~~~Gt 80 (393)
T d1hvxa2 1 AAPFNGTMMQYFEWYLPDDGTLWTKVANEANNLSSLGITALWLPPAYKGTSRSDVGYGVYDLYDLGEFNQKGAVRTKYGT 80 (393)
T ss_dssp CCCCCCCEEECCCTTCCSSSCHHHHHHHHHHHHHHTTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCC
T ss_pred CCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98988648996750668889709999997899997499989979888688889989886676555545556776878899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~df~~LV~~aH~~GIkVIlDvV~NHt~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (393)
T d1hvxa2 81 KAQYLQAIQAAHAAGMQVYADVVFDHKGGADGTEWVDAVEVNPSDRNQEISGTYQIQAWTKFDFPGRGNTYSSFKWRWYH 160 (393)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEECCCSEEEEEEEEEEETTEEEEECSCCEEEEEEEEBCCTTTTTSSCCCCBCGGG
T ss_pred HHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999999999987998999984355446677542110134764334455787444455556777777778776655555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~np~V~~~l~~~~~~w~~~~giDGfR~D~a~~i~ 240 (393)
T d1hvxa2 161 FDGVDWDESRKLSRIYKFRGIGKAWDWEVDTENGNYDYLMYADLDMDHPEVVTELKSWGKWYVNTTNIDGFRLDAVKHIK 240 (393)
T ss_dssp EEEEEEETTTTEEEEEEECSTTCCCCSSCCCTTSCCCCCSSEEECTTCHHHHHHHHHHHHHHHHHHCCCEEEETTGGGSC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC
T ss_conf 78776556677676433268757556555554300101453300557737777788899998876388615642245578
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~f~~~~~~~~~~~~~~~~~~~gE~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (393)
T d1hvxa2 241 FSFFPDWLSYVRSQTGKPLFTVGEYWSYDINKLHNYIMKTNGTMSLFDAPLHNKFYTASKSGGTFDMRTLMTNTLMKDQP 320 (393)
T ss_dssp TTHHHHHHHHHHHHHCCCCEEEECCCCSCHHHHHHHHHHTTTCSEEECHHHHHHHHHHHHTTTCSCGGGTTTTCHHHHCG
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
T ss_conf 66799999999874477623551002763777777764045655003089999999987038779999999753423784
Q ss_pred ------------------------------------------------------------------------E
Q ss_conf ------------------------------------------------------------------------8
Q 002647 518 ------------------------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~v~fl~NHD~~r~~~~~~~~~~~~~~~a~a~~l~~~pGiP~iyyGdE~G~~~~~~p~~~~~i~~~~~~rk~ 393 (393)
T d1hvxa2 321 TLAVTFVDNHDTEPGQALQSWVDPWFKPLAYAFILTRQEGYPCVFYGDYYGIPQYNIPSLKSKIDPLLIARRD 393 (393)
T ss_dssp GGEEEESCCTTTSTTSTTCCCCCTTTHHHHHHHHHHSSSSEEEEEHHHHHCBGGGTBCCCHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHCCC
T ss_conf 3186877578785513444587999999999999982899389883672299996999707786999997179
|
| >d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]
Probab=100.00 E-value=0 Score=29642.30 Aligned_cols=1 Identities=0% Similarity=-0.991 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~f~w~~~~~gg~~~gi~~kLdylk~LGvtaI~L~Pi~~~~~~~~~gy~~~~~Y~~~~~~~~~~vd~~~Gt~~d 80 (393)
T d1e43a2 1 VNGTLMQYFEWYTPNDGQHWKRLQNDAEHLSDIGITAVWIPPAYKGLSQSDNGYGPYDLYDLGEFQQKGTVRTKYGTKSE 80 (393)
T ss_dssp CCCCEEECCCTTCCSSSCHHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHH
T ss_pred CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 97617886766778889899999997899997599989969572689888999786567665434456766888999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 f~~Lv~~~H~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (393)
T d1e43a2 81 LQDAIGSLHSRNVQVYGDVVLNHKAGADATEDVTAVEVNPANRNQETSEEYQIKAWTDFRFPGRGNTYSDFKWHWYHFDG 160 (393)
T ss_dssp HHHHHHHHHHTTCEEEEEECCSEECCCSEEEEEEEEEEETTEEEEECSCCEEEEEEEEBCCTTTTTSSCCCCBCGGGEEE
T ss_pred HHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999999986998999870025557775444442235741113566654555344555667778877666555444788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdln~~np~v~~~~~~~~~~w~~~~GiDGfR~Da~~~~~~~f 240 (393)
T d1e43a2 161 ADWDESRKISRIFKFRGEGKAWDWEVSSENGNYDYLMYADVDYDHPDVVAETKKWGIWYANELSLDGFRIDAAKHIKFSF 240 (393)
T ss_dssp ESCBTTTTBCCEEEECSSSCCCCSSSCCTTSCCCCCSSEEECTTCHHHHHHHHHHHHHHHHHHTCCEEEETTGGGSCHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHH
T ss_conf 87666677677322157645555556555540202332311437714567799998766543486537861345689799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~gE~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~ 320 (393)
T d1e43a2 241 LRDWVQAVRQATGKEMFTVAEYWQNNAGKLENYLNKTSFNQSVFDVPLHFNLQAASSQGGGYDMRKLLNGTVVSKHPLKS 320 (393)
T ss_dssp HHHHHHHHHHHHCSCCEEEECCCCSCHHHHHHHHHHTTTCSEEECHHHHHHHHHHHHTTTCSCGGGTTTTCSTTTCGGGE
T ss_pred HHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCE
T ss_conf 99999999874286057766533773776641222044430454117799999877216648899998515111680402
Q ss_pred ------------------------------------------------------------------------E
Q ss_conf ------------------------------------------------------------------------8
Q 002647 518 ------------------------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------------------------a 518 (897)
-
T Consensus 321 v~fl~nHD~~R~~~~~~~~~~~~~~la~a~ll~~~pG~P~IyyGdE~G~~g~~~~~~~~~~~~i~~l~~~rk~ 393 (393)
T d1e43a2 321 VTFVDNHDTQPGQSLESTVQTWFKPLAYAFILTRESGYPQVFYGDMYGTKGDSQREIPALKHKIEPILKARKQ 393 (393)
T ss_dssp EEESCCTTTSTTSTTCCCCCTTTHHHHHHHHHHSSSSEEEEEHHHHHCCCCSSTTCCCCCHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 5755178773413356763479999999999982899479871573299998998867789999999998684
|
| >d1yvua2 c.55.3.10 (A:315-706) Argonaute homologue Aq_1447 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Ribonuclease H-like family: PIWI domain domain: Argonaute homologue Aq 1447 species: Aquifex aeolicus [TaxId: 63363]
Probab=100.00 E-value=0 Score=29568.27 Aligned_cols=1 Identities=0% Similarity=-0.560 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~f~~~l~~~~~~~G~~~~~~~~~~ 80 (392)
T d1yvua2 1 KLNFKDTVLDAKGKNTKVITNLRKFLELCRPFVKKDVLSVEIISVSVYKKLEWRKEEFLKELINFLKNKGIKLKIKGKSL 80 (392)
T ss_dssp ECCCCCCEECSSCCEECCSSCCHHHHHHCCCCCSCSEEEEEEEEEEC-----CHHHHHHHHHHHHHHTTTCEEEEEEEEE
T ss_pred CCCCHHHEECCCCCCCEEEECCEEHHHHCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCEECCCCCCE
T ss_conf 92110210135899742223320224324732356634424789999631066799999999999986292645788671
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~l~~vi~~~~~~~~~~~~~~~Y~~IK~~~~~~gIptQ~i~~~tl~~~~~~~~~~NIa 160 (392)
T d1yvua2 81 ILAQTREEAKEKLIPVINKIKDVDLVIVFLEEYPKVDPYKSFLLYDFVKRELLKKMIPSQVILNRTLKNENLKFVLLNVA 160 (392)
T ss_dssp EECSSTTHHHHHHHHHHTTTSSCSEEEEEEC----------CHHHHHHHHHHHHTTCCCEEEEHHHHHHSCHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECHHHCCCCCCHHHHHHHH
T ss_conf 31277511599999998402677789999768888665554047999999985499664898866616898358999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 lqinaKlGGipw~l~~~~~~~tmiIGiDv~h~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~ee~~~~~~~~~l~~ 240 (392)
T d1yvua2 161 EQVLAKTGNIPYKLKEIEGKVDAFVGIDISRITRDGKTVNAVAFTKIFNSKGELVRYYLTSYPAFGEKLTEKAIGDVFSL 240 (392)
T ss_dssp HHHHHHTTCCSCEESCCTTCCSEEEEECEEECCCSSSCCCEEEEEEEECTTSCEEEEEEEEECSCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCEECCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 99999849834688788999759999998715888984638999999868997789998854776078999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~P~rIIi~RdG~~~~~El~~i~~a~~~~~pki~~IvV~Krh~~Rff~~~~~~~Gt~v~~~~~~~~~~~s~~~~ 320 (392)
T d1yvua2 241 LEKLGFKKGSKIVVHRDGRLYRDEVAAFKKYGELYGYSLELLEIIKRNNPRFFSNEKFIKGYFYKLSEDSVILATYNQVY 320 (392)
T ss_dssp HHHTTCCTTCEEEEEESSCCCHHHHHHHHHHHHHHTCEEEEEEEECSSCCCEECSCSCCTTEEEEBSSSEEEECCSCCCS
T ss_pred HHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCEEECCCCCCCCCCEEECCCCEEEEEECCCCC
T ss_conf 99964999866999958877379999999999864995899999815882656789999998771798929999768857
Q ss_pred -----------------------------------------------------------------------E
Q ss_conf -----------------------------------------------------------------------8
Q 002647 518 -----------------------------------------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------------------------------------a 518 (897)
-
T Consensus 321 qGT~rP~~Y~vl~d~~~~d~l~~lt~~Lc~l~~~~t~svslPapi~YA~~lA~~~r~~~~p~~~~~~~~~~l 392 (392)
T d1yvua2 321 EGTHQPIKVRKVYGELPVEVLCSQILSLTLMNYSSFQPIKLPATVHYSDKITKLMLRGIEPIKKEGDIMYWL 392 (392)
T ss_dssp TTCCCCEEEEEEECSSCHHHHHHHHHHGGGGGCCSSSCCCSCTTTTTHHHHHHHHHTCSSCCEEEESCCTTC
T ss_pred CCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 877788589998898998999999999775126718998007799999999999751178654575524219
|
| >d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Methionine gamma-lyase, MGL species: Pseudomonas putida [TaxId: 303]
Probab=100.00 E-value=0 Score=29580.07 Aligned_cols=1 Identities=0% Similarity=-0.560 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~g~~T~~vH~G~~~~~~~g~v~pPI~~ssT~~f~~~~~~~~~~~~~~~~~~Y~R~~nPT~~~LE~~la~LEg~~~a~~~ 80 (392)
T d1gc0a_ 1 LPGFATRAIHHGYDPQDHGGALVPPVYQTATFTFPTVEYGAACFAGEQAGHFYSRISNPTLNLLEARMASLEGGEAGLAL 80 (392)
T ss_dssp CCCHHHHHHHTTCCGGGGTTBSSCCBCCCSCBCCC---------------------CCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCCCCHHCEECCCCCCCCCCCEECCCCCCCCEEECCHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCEEEH
T ss_conf 94812020548988877899950882288887518889999862688688523289886899999999998399511101
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~SGmaAi~~~l~~l~~~Gd~vl~~~~~Yg~t~~l~~~~~~~~Gi~~~~~d~~d~~~~~~ai~~~t~lv~~Esp~NP~l~v 160 (392)
T d1gc0a_ 81 ASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMADLQALEAAMTPATRVIYFESPANPNMHM 160 (392)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCCC
T ss_pred HHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCEEEE
T ss_conf 44789999998752369980001211110145564321024774224578667999998478787599964666321354
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~Di~~i~~ia~~~g~~~vvDnT~atP~~~~Pl~~GaDivihS~TKyi~Ghsd~~~G~v~~~~~~~~~~r~~~~~~~~G~~ 240 (392)
T d1gc0a_ 161 ADIAGVAKIARKHGATVVVDNTYCTPYLQRPLELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGAV 240 (392)
T ss_dssp CCHHHHHHHHGGGTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCCC
T ss_pred CCHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHCCCEEEEECCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 24399999998459879983672574505867848988998665203598554431024306789898899999703886
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~p~da~ll~rgl~TL~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~~~gg~~sf~l~~~~~~~~ 320 (392)
T d1gc0a_ 241 LSPHDAALLMRGIKTLNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKGGIGAGR 320 (392)
T ss_dssp CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETTHHHHHH
T ss_pred CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHH
T ss_conf 88045799982206089999999999999999997399865786524458865332133456778379999959999999
Q ss_pred -----------------------------------------------------------------------E
Q ss_conf -----------------------------------------------------------------------8
Q 002647 518 -----------------------------------------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------------------------------------a 518 (897)
+
T Consensus 321 ~f~~~L~l~~~a~SlGg~eSLi~~pa~~th~~~~~e~r~~~Gi~~~liRlSVGlEd~eDLi~Dl~~AL~aa~ 392 (392)
T d1gc0a_ 321 RFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKASA 392 (392)
T ss_dssp HHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHHC
T ss_pred HHHHHCCCCEEEECCCCCCHHHCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHC
T ss_conf 999858846671246876850108622264228999999759792969998601899999999999999629
|
| >d2d0ta1 a.266.1.2 (A:12-403) Indoleamine 2,3-dioxygenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Indolic compounds 2,3-dioxygenase-like superfamily: Indolic compounds 2,3-dioxygenase-like family: Indoleamine 2,3-dioxygenase-like domain: Indoleamine 2,3-dioxygenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=29576.16 Aligned_cols=1 Identities=100% Similarity=2.131 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~f~vs~~~GFLp~~Pl~~LP~~y~~w~~i~~~lp~Ll~~~~lr~~V~~LP~l~~~~l~~~~~~r~a~~~lsfla~aYi 80 (392)
T d2d0ta1 1 SKEYHIDEEVGFALPNPQENLPDFYNDWMFIAKHLPDLIESGQLRERVEKLNMLSIDHLTDHKSQRLARLVLGCITMAYV 80 (392)
T ss_dssp CCSSSCBTTTBTSCSSCCCCCCGGGHHHHHHHHTHHHHHHTTCHHHHHHHCCCCCSTTCCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 97334087768899984565786327999999987887755809999984786784433896999999999999999997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 w~~~~~~~~~~LP~~Ia~Pl~~vs~~Lg~pP~ltYa~~~L~Nw~~~dp~~~~~~dNl~~i~~F~g~~dE~~F~lv~v~iE 160 (392)
T d2d0ta1 81 WGKGHGDVRKVLPRNIAVPYCQLSKKLELPPILVYADCVLANWKKKDPNKPLTYENMDVLFSFRDGDCSKGFFLVSLLVE 160 (392)
T ss_dssp HTTSSSCCCSEECHHHHHHHHHHHHHHTCCSSCCHHHHTTSSEEESSTTSCSCGGGEEESCCSSTTSCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHH
T ss_conf 07899977778987888999999997499986516556310310058778887330556402789974135789879999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~l~~~~~~~~a~~~~d~~~~~~~l~~i~~~i~~i~~~~~~m~e~~~p~~fy~~~R~fi~G~k~~~~~p~GviYeg 240 (392)
T d2d0ta1 161 IAAASAIKVIPTVFKAMQMQERDTLLKALLEIASCLEKALQVFHQIHDHVNPKAFFSVLRIYLSGWKGNPQLSDGLVYEG 240 (392)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTTHHHHCCHHHHHHTHHHHTCCBSSCGGGTTCBEETT
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEEEEEECCCCCCCCCCEECC
T ss_conf 86446999999999998767758799999999999999999998502029855621423545322437776888730036
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~p~~~~G~SgaQSsii~~lD~~LGv~h~~~~~~l~~~L~~mR~YmP~~HR~Fl~~l~~~~~ir~~v~~~~~~~L~~a 320 (392)
T d2d0ta1 241 FWEDPKEFAGGSAGQSSVFQCFDVLLGIQQTAGGGHAAQFLQDMRRYMPPAHRNFLCSLESNPSVREFVLSKGDAGLREA 320 (392)
T ss_dssp TCSSCBCBCCCCGGGCHHHHHHHHHTTCCSSCSSSHHHHHHHHHGGGSCHHHHHHHHHHHTSCCHHHHHHTTCCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHH
T ss_conf 77776426788766664089999995785668875088999999985739999999999840436788870588899999
Q ss_pred -----------------------------------------------------------------------E
Q ss_conf -----------------------------------------------------------------------8
Q 002647 518 -----------------------------------------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------------------------------------a 518 (897)
|
T Consensus 321 y~~~v~~l~~FR~~H~~~v~~YIi~~~~~~~~~~~~~~~~~~~~~~gTGGT~~~~fLk~~rd~t~~~~~~~~ 392 (392)
T d2d0ta1 321 YDACVKALVSLRSYHLQIVTKYILIPASQQPKENKTSEDPSKLEAKGTGGTDLMNFLKTVRSTTEKSLLKEG 392 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTHHHHTC-------------------CTHHHHHHHHHHHHHHHHTCSTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 999999999999999999999999886641223678888888888217885488999997767887761389
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=0 Score=29571.38 Aligned_cols=1 Identities=0% Similarity=0.537 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~~~e~Lt~~~~~~la~~lg~~~~~~~l~~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E 80 (392)
T d2pula1 1 KTPLYETLNESSAVALAVKLGLFPSKSTLTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIE 80 (392)
T ss_dssp CCCCCCCCCHHHHHHHHHHTTC-----CCEEEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCEEEEEECCCCHHCCCCCCCCCCHHHHHHH
T ss_conf 99877269989999999984998988873699807985276899995799848999617713034677788877899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~L~~~~~~~p~~vP~v~~~d~~~~~lvmE~L~~~~~~~~~l~~~~~~~~~a~~lg~~La~~h~~~~~~~~~~~~~~~~ 160 (392)
T d2pula1 81 SSALIRQGEHVPHLVPRVFYSDTEMAVTVMEDLSHLKIARKGLIEGENYPHLSQHIGEFLGKTLFYSSDYALEPKVKKQL 160 (392)
T ss_dssp HHHHHHHHTTCGGGSCCEEEEETTTTEEEECCCTTSEEHHHHHHHTCCCTTHHHHHHHHHHHHHHHTSTTTSCHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCEEEEECCCCCEEEEECCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCC
T ss_conf 99999865057988552899859887798713577653022201542128999999999999998735033442111012
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~n~~l~~~~e~~~~~~py~~~~~~~~~~~~~~~~~~l~~d~~l~~~~~~l~~~~~~~~~~LiHGDl~~gNIlv~~~ 240 (392)
T d2pula1 161 VKQFTNPELCDITERLVFTDPFFDHDTNDFEEELRPFVEKLWNNDSVKIEAAKLKKSFLTSAETLIHGDLHTGSIFASEH 240 (392)
T ss_dssp HHHTCCHHHHHHHHHHTTTGGGTTCTTCCCCGGGHHHHHHHHTCHHHHHHHHHHHHHHHHBCCEEECSCCCGGGEEECSS
T ss_pred CCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCEEECCC
T ss_conf 33446578887777640104788988741065455778765520789999999874323688600335776784667599
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~vID~E~a~~G~~~~Dlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~ 320 (392)
T d2pula1 241 ETKVIDPEFAFYGPIGFDVGQFIANLFLNALSRDGADREPLYEHVNQVWETFEETFSEAWQKDSLDVYANIDGYLTDTLS 320 (392)
T ss_dssp CEEECCCTTCEEECTHHHHHHHHHHHHHHHHHSCGGGGHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTTTSTTHHHHHHH
T ss_pred CEEEECHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
T ss_conf 30895226522287899999999999999740663034568999999999999999999876165500034899999999
Q ss_pred -----------------------------------------------------------------------E
Q ss_conf -----------------------------------------------------------------------8
Q 002647 518 -----------------------------------------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~d~~~~~g~~~~rr~~g~a~~~d~~~i~~~~~r~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 392 (392)
T d2pula1 321 HIFEEAIGFAGCELIRRTIGLAHVADLDTIVPFDKRIGRKRLALETGTAFIEKRSEFKTITDVIELFKLLVK 392 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSSCCHHHHTCSSHHHHHHHHHHHHHHHHHHHHHTTTCCSHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
T ss_conf 999999998889999987341444421315798889999999999999999615512999999999999709
|
| >d1xima_ c.1.15.3 (A:) D-xylose isomerase {Actinoplanes missouriensis [TaxId: 1866]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Xylose isomerase-like family: Xylose isomerase domain: D-xylose isomerase species: Actinoplanes missouriensis [TaxId: 1866]
Probab=100.00 E-value=0 Score=29570.32 Aligned_cols=1 Identities=0% Similarity=-0.991 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~kfs~g~Wt~~~~g~d~FG~~tr~~~~~~e~~~~l~~lG~~g~~fHd~dl~P~~~~~~~~~~~~~~~k~~l~~t 80 (392)
T d1xima_ 1 VQATREDKFSFGLWTVGWQARDAFGDATRTALDPVEAVHKLAEIGAYGITFHDDDLVPFGSDAQTRDGIIAGFKKALDET 80 (392)
T ss_dssp CCCCGGGCEEEEHHHHTCCCCBTTBCCSSCCCCHHHHHHHHHHHTCSEEECBHHHHSCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 99986673579960366768799998877754799999999985998686067877888998788999999999999863
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 Gl~~~~~t~nlf~~p~f~~Ga~TsPD~~vR~~Ai~~~k~aID~aaeLGa~~~v~W~G~~G~~~~~~~d~~~~~~~~~e~l 160 (392)
T d1xima_ 81 GLIVPMVTTNLFTHPVFKDGGFTSNDRSVRRYAIRKVLRQMDLGAELGAKTLVLWGGREGAEYDSAKDVSAALDRYREAL 160 (392)
T ss_dssp TCBCCEEECCCSSSGGGTTCSTTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEEECTTSEESSGGGCCHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 98234663342447143158877939999999999999999999995898379637877667876558999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~v~dya~d~g~gv~~~IEpKP~EP~~~~~i~d~~~al~~i~~vg~p~~vgvnlD~gH~~~ag~~~~~~ia~a~~~gkL~ 240 (392)
T d1xima_ 161 NLLAQYSEDRGYGLRFAIEPKPNEPRGDILLPTAGHAIAFVQELERPELFGINPETGHEQMSNLNFTQGIAQALWHKKLF 240 (392)
T ss_dssp HHHHHHHHHHTCCCEEEEECCSSSSSSEESSCSHHHHHHHHTTSSSGGGEEECCBHHHHHTTTCCHHHHHHHHHHHTCBC
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCCCEEECCHHHHHHHHHHCCCCCCEEEECCHHHHHHCCCCHHHHHHHHHHCCCEE
T ss_conf 99999887508885598603778887543407799999999971990036674113245433798579999998659789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 hvHlND~~~~~~D~DL~~Gs~~~~~~~~l~~~l~~g~~g~~~~~G~~~fD~~~~r~~~~~~~~~~~~~~~~~~~~l~~~a 320 (392)
T d1xima_ 241 HIDLNGQHGPKFDQDLVFGHGDLLNAFSLVDLLENGPDGAPAYDGPRHFDYKPSRTEDYDGVWESAKANIRMYLLLKERA 320 (392)
T ss_dssp CCEECBCCSSSSCCCBCTTSSSHHHHHHHHHHHHSCGGGSCSCCSCEEECCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99748998989888988898788899999999984777776777875402587677871069999999999999999999
Q ss_pred -----------------------------------------------------------------------E
Q ss_conf -----------------------------------------------------------------------8
Q 002647 518 -----------------------------------------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~l~~d~~~~~al~a~~~~~~~~~tl~~~~~~~~~~a~~~~~~~~~~~~~~~rg~~~~~l~q~~~~~l~~~~ 392 (392)
T d1xima_ 321 KAFRADPEVQEALAASKVAELKTPTLNPGEGYAELLADRSAFEDYDADAVGAKGFGFVKLNQLAIEHLLGAR 392 (392)
T ss_dssp HHHHHCHHHHHHHHHTTSGGGGSCSSCTTCCHHHHHHCGGGTTTCCHHHHHTSCCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCC
T ss_conf 998778788999998665663376556564468998767533346877786534369999999999972689
|
| >d1cl1a_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Cystathionine beta-lyase, CBL species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29499.35 Aligned_cols=1 Identities=0% Similarity=-0.194 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
|
T Consensus 1 k~~T~~vh~g~~~~~~~g~v~pPi~~sst~~f~~~~~~~~~~~~~~~~~~~Y~R~~nPt~~~le~~la~LEg~~~a~~~~ 80 (391)
T d1cl1a_ 1 KLDTQLVNAGRSKKYTLGAVNSVIQRASSLVFDSVEAKKHATRNRANGELFYGRRGTLTHFSLQQAMCELEGGAGCVLFP 80 (391)
T ss_dssp CHHHHHHHTTCCHHHHTTBSSCCBCCCSCBCCSSHHHHHHHHHTTTTTCCCCTTTCCHHHHHHHHHHHHHHTCSEEEEES
T ss_pred CCCCCEECCCCCCCCCCCCCCCCEECCCCEEECCHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 91400360898999889984498548885362898999987527766866767899865999999999981995279851
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 SGMaAi~~~l~~l~~~Gd~iv~~~~~Yg~T~~l~~~~l~~~Gi~~~~~d~~d~~~~~~~i~~~t~~i~~EtpsNP~l~v~ 160 (391)
T d1cl1a_ 81 CGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIGADIVKHLQPNTKIVFLESPGSITMEVH 160 (391)
T ss_dssp SHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTTCGGGGGGTCCTTEEEEEEESSCTTTCCCC
T ss_pred CCCCEEEEHHHCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC
T ss_conf 50001110222046778769983355520133322011233333200267311122233345553355303576532112
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 Di~~i~~~a~~~~~g~~~vVDnT~atP~~~~Pl~~GaDivvhS~TKy~~GhsdvlgG~vv~~~~~~~~~~~~~~~~G~~~ 240 (391)
T d1cl1a_ 161 DVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMGQMV 240 (391)
T ss_dssp CHHHHHHHHHHHCTTCEEEEECTTTTTTSSCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHHHHHTTCCC
T ss_pred CCHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCCCCCEEEEECCHHCCCCCCCCCCCEECCCCCCCCCHHHHHCCCCCC
T ss_conf 32789998874157827998534332322111353340677623100036653334420003543210001111001357
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~p~~a~ll~rgl~TL~lR~~~~~~nA~~vA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~e~~ 320 (391)
T d1cl1a_ 241 DADTAYITSRGLRTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEEL 320 (391)
T ss_dssp CHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCCHHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHH
T ss_conf 85120244435316788999999999999988874465433333222204568988630589876402453388899999
Q ss_pred ----------------------------------------------------------------------E
Q ss_conf ----------------------------------------------------------------------8
Q 002647 518 ----------------------------------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------------------------------a 518 (897)
.
T Consensus 321 ~~f~d~L~l~~~a~SlG~~~SLi~~~~~~~~~~~~~~~~~gi~~~liRlSVGlEd~eDLi~Dl~~AL~~i~ 391 (391)
T d1cl1a_ 321 ANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFARIV 391 (391)
T ss_dssp HHHHTTCSSCBCCSCCCSSSCEEEEECHHHHHHTSTTCCCCCCSCEEEEECCSSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHCCCCCEEEECCCCCCCCEECCCCCCCCCCCCHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHC
T ss_conf 99997499265856778876533478222343579247659996979999561999999999999999669
|
| >d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glucose oxidase species: Penicillium amagasakiense [TaxId: 63559]
Probab=100.00 E-value=0 Score=29493.43 Aligned_cols=1 Identities=0% Similarity=-0.427 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~~~~~~~~p~~~~~~tyD~IIVGsG~aG~vlA~rLae~~~~~VLlLEaG~~~~~~~~~~~~p~~~~~~~~~~ 80 (391)
T d1gpea1 1 YLPAQQIDVQSSLLSDPSKVAGKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQIFGTT 80 (391)
T ss_dssp CCCCCCCCCGGGSBCCGGGTTTCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCCTTSCHHHHCGGGTTTTTTST
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEECHHHHHHHHCCC
T ss_conf 98600145554112791212699664999896789999999998787982999837889888873040888998860897
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~dw~~~t~p~~~~r~~~~~~G~~lGGsS~in~~~~~rg~~~d~~~w~~~~G~~gW~~~~l~pyf~k~E~~~~~~~~~~~~ 160 (391)
T d1gpea1 81 VDQNYLTVPLINNRTNNIKAGKGLGGSTLINGDSWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEAARTPTAAQLAA 160 (391)
T ss_dssp TBCCEECCCCTTSCCCEECCBCSTTGGGGTSCCEECCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHTEEECCCCHHHHHH
T ss_pred CCCCCEEEECCCCCEEEECEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHCCC
T ss_conf 66683413567995741121112576551430378603522334410037998644320378888765315886011035
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~g~~~~~~~~~~~~~~~~~p~~~~~~~a~~~~G~~~~~~~~~g~~~~~~~~~~~~~~~~~r~s~a~~~~~p~ 240 (391)
T d1gpea1 161 GHSFNATCHGTNGTVQSGARDNGQPWSPIMKALMNTVSALGVPVQQDFLCGHPRGVSMIMNNLDENQVRVDAARAWLLPN 240 (391)
T ss_dssp TCCCCGGGCCBSSSEEEBCCCCSSCBCTHHHHHHHHHHHTTCCBSCCTTSSCCCEEECCEESBCTTCCBCCHHHHHTTTT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEECCCCCCCHHHHCCCCC
T ss_conf 66766445678886432445565545789999999887548721201225765432222211320333442122025763
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~r~nl~i~t~a~V~rIl~~~~~~g~ra~GV~~~~~~g~~~~v~A~keVILaAGai~SP~LLl~SGIGp~~~L~~~gI~~ 320 (391)
T d1gpea1 241 YQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEYSGIGLKSVLDQANVTQ 320 (391)
T ss_dssp TTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHHTTEECHHHHHHTTCCC
T ss_pred CCCHHHHHHCCCEEEEEEEECCCCCCEEEEEEEECCCCEEEEEEECCEEEEECCHHCCHHHHHHCCCCCHHHHHHCCCCE
T ss_conf 22013443305325688650788874688658833897278998488799926120466899866797388998779988
Q ss_pred ----------------------------------------------------------------------E
Q ss_conf ----------------------------------------------------------------------8
Q 002647 518 ----------------------------------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------------------------------a 518 (897)
|
T Consensus 321 v~dlP~Gvg~nl~dh~~~~v~~~~~v~~~~~l~~~~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (391)
T d1gpea1 321 LLDLPVGICSMMSRELGGVVDATAKVYGTQGLRVIDGSIPPTQVSSHVMTIFYGMALKVADAILDDYAKSA 391 (391)
T ss_dssp SEECCTTCTCBSCGGGTCSBCTTCBBTTCBSEEECSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEECCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99897541215346766555034345477774331245686220432234443557666689998761249
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=0 Score=29493.02 Aligned_cols=1 Identities=0% Similarity=-0.924 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 mril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (391)
T d1pn3a_ 1 MRVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEVGVPMVPVGRAVRAGAREPGELPPGAAEVVTEVVA 80 (391)
T ss_dssp CEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHTCCEEECSSCSSGGGSCTTCCCTTCGGGHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHCCCEEEECCCCHHHHHHCHHHHHHHHHHHHHHHHH
T ss_conf 97999858873689999999999998899899997803676898779848987836877734856666999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~l~~~~~~~D~vi~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (391)
T d1pn3a_ 81 EWFDKVPAAIEGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDMYNQGADRLFGDAVNSHRASI 160 (391)
T ss_dssp HHHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHHHHHHHHHHHHTHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999730798478734471378999999980876488531224455312220056788999888778899999874
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 240 (391)
T d1pn3a_ 161 GLPPVEHLYDYGYTDQPWLAADPVLSPLRPTDLGTVQTGAWILPDERPLSAELEAFLAAGSTPVYVGFGSSSRPATADAA 240 (391)
T ss_dssp SCCCCCCHHHHHHCSSCEECSCTTTSCCCTTCCSCCBCCCCCCCCCCCCCHHHHHHTTSSSCCEEEECTTCCSTHHHHHH
T ss_pred CCCCCCCCCCCCCCCCEEECCCHHHHCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCHHHHH
T ss_conf 37663200024566640231542431157777771565686567655677888642115897278722431223278999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~p~~~ll~~a~~~v~hgG~~t~~Eal~~G~P~v~~P~~~d~~~ 320 (391)
T d1pn3a_ 241 KMAIKAVRASGRRIVLSRGWADLVLPDDGADCFVVGEVNLQELFGRVAAAIHHDSAGTTLLAMRAGIPQIVVRRVVDNVV 320 (391)
T ss_dssp HHHHHHHHHTTCCEEEECTTTTCCCSSCCTTCCEESSCCHHHHHTTSSCEEEESCHHHHHHHHHHTCCEEEECSSCCBTT
T ss_pred HHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHCCEEEECCCHHHHHHHHHHCCCEEEECCCCCCCC
T ss_conf 99999998569779994364333445688988995446879998425489852743799999982886899335567745
Q ss_pred ----------------------------------------------------------------------E
Q ss_conf ----------------------------------------------------------------------8
Q 002647 518 ----------------------------------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------------------------------a 518 (897)
-
T Consensus 321 eQ~~nA~~l~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~r~~a~~~a~~~~~~g~~~aa~~i~~~l~~~~ 391 (391)
T d1pn3a_ 321 EQAYHADRVAELGVGVAVDGPVPTIDSLSAALDTALAPEIRARATTVADTIRADGTTVAAQLLFDAVSLEK 391 (391)
T ss_dssp BCCHHHHHHHHHTSEEEECCSSCCHHHHHHHHHHHTSTTHHHHHHHHGGGSCSCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
T ss_conf 29999999998798897685789999999999998399999999999999885279999999999987459
|
| >d1nt4a_ c.60.1.2 (A:) Glucose-1-phosphatase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate mutase-like superfamily: Phosphoglycerate mutase-like family: Histidine acid phosphatase domain: Glucose-1-phosphatase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29491.34 Aligned_cols=1 Identities=0% Similarity=0.138 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~vP~g~~L~~V~vl~RHG~R~P~~~~~~~~~~~~~~~~~~~~~~~g~LT~~G~~q~~~lG~~lr~~Y~~~~~l~~~~~~ 80 (391)
T d1nt4a_ 1 QTVPEGYQLQQVLMMSRANLRAPLANNGSVLEQSTPNKWPEWDVPGGQLTTKGGVLEVYMGHYMREWLAEQGMVKSGECP 80 (391)
T ss_dssp CCCCTTEEEEEEEEEECCCCBCCCGGGHHHHHHTCSSCCCCCSSCTTCBCHHHHHHHHHHHHHHHHHHHHTTSSCSSSCC
T ss_pred CCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 99899998849999973867999988775313477344778999856110889999999999999998760677787778
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~v~vrst~~~Rt~~SA~afl~Gl~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (391)
T d1nt4a_ 81 PPYTVYAYANSLQRTVATAQFFITGAFPGCDIPVHHQEKMGTMDPTFNPVITDDSAAFSEQAVAAMEKELSKLQLTDSYQ 160 (391)
T ss_dssp CTTSEEEEECSSHHHHHHHHHHHHHHSTTSCCCEECCSCCSSCCTTTCCCCCCCCSHHHHHHHHHHHHHHHHCCCHHHHH
T ss_pred CCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHH
T ss_conf 70005886178719999999999972788777756443457777666775456652106788787764310243139999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (391)
T d1nt4a_ 161 LLEKIVNYKDSPACKEKQQCSLVDGKNTFSAKYQQEPGVSGPLKVGNSLVDAFTLQYYEGFPMDQVAWGEIKSDQQWKVL 240 (391)
T ss_dssp HHHHHHTGGGSTTTTTTCCCCTTTCCCEEECCTTSCCEEESHHHHHHHHHHHHHHHHHTTCCTTTGGGGTSCSTTHHHHH
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
T ss_conf 99997633022144555555688888888875324766675077776599999999984899997434676769999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~i~~~~~~~~~~~~k~~l~s~HD~ti~~~l~aLgl~~~~~p~~~~~~p~~s~~ 320 (391)
T d1nt4a_ 241 SKLKNGYQDSLFTSPEVARNVAKPLVSYIDKALVTDRTSAPKITVLVGHDSNIASLLTALDFKPYQLHDQNERTPIGGKI 320 (391)
T ss_dssp HHHHHHHHHHHHCSHHHHHHHTHHHHHHHHHHTTTTTTTSCSEEEEECCHHHHHHHHHHTTBCCCCCTTCSSSSCTTCEE
T ss_pred HHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEE
T ss_conf 99999999986287688764022899999999873589886279997156689999998389866788877888976638
Q ss_pred ----------------------------------------------------------------------E
Q ss_conf ----------------------------------------------------------------------8
Q 002647 518 ----------------------------------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~fEl~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gC~~~~~~lCpl~~F~~~~~~~i~ 391 (391)
T d1nt4a_ 321 VFQRWHDSKANRDLMKIEYVYQSAEQLRNADALTLQAPAQRVTLELSGCPIDADGFCPMDKFDSVLNEAVK 391 (391)
T ss_dssp EEEEEEETTTTEEEEEEEEEECCHHHHHHTCCCCSSSCCEEEECCBTTBCCCTTSCEEHHHHHHHHHHHCC
T ss_pred EEEEEECCCCCCCEEEEEEECCCCHHHCCCCCCCEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 99998617888755999986376132035665430103774156479988999996689999999999739
|
| >d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Cysteine desulfurase IscS species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29490.93 Aligned_cols=1 Identities=0% Similarity=0.570 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
|
T Consensus 1 ~~~iYlD~aa~~p~~~~v~ea~~~~~~~~~~~~np~~~~~~~~~~~~~~~~~~R~~iA~~lg~~~~~I~~~~~~t~~l~~ 80 (391)
T d1p3wa_ 1 KLPIYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATESDNL 80 (391)
T ss_dssp CCSEECBTTTCCCCCHHHHHHHHTTTSTTSCCCCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESSHHHHHHH
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHH
T ss_conf 97498537422679999999999999864665787316659999999999999999999739997819997988999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~gd~Vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~~~~~i~~~T~lv~is~~~n~tG~~~ 160 (391)
T d1p3wa_ 81 AIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQ 160 (391)
T ss_dssp HHHHHHHHHGGGCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCCTTEEEEECCSBCTTTCCBC
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCEECHHHHHHHCCCCCEEEEEECCCCCCEEEC
T ss_conf 99642353057998899924654138999999997598899967887872768999975799948999978978881077
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~I~~~~~~~~~~~ivD~~~~~g~~~~d~~~~~~D~~~~s~~k~~g~~g~g~~~~~~~~~~~~~~~~~gg~~~~~~~~ 240 (391)
T d1p3wa_ 161 DIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHGGGHERGMRS 240 (391)
T ss_dssp CHHHHHHHHHHHTCEEEEECTTTBTTBCCCTTTSCCSEEEEESTTTTSCSSCEEEEECBTTBCCCCCSSCSSCTTTTTSC
T ss_pred CHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCEEEEEEECCHHCCCCCCCCCCCCCCCCCC
T ss_conf 78999998555895799730122577564202104653212231005788559999855021156875468856667515
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 320 (391)
T d1p3wa_ 241 GTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVEGESLIMALKDLA 320 (391)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTEEECSCTTTSCTTEEEEEETTSCHHHHHHHTTTEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCEEEEEEECCCCHHHHHHHHCCCE
T ss_conf 74023334453000467887766789999999999999877624806502444567518999857877699999718977
Q ss_pred ----------------------------------------------------------------------E
Q ss_conf ----------------------------------------------------------------------8
Q 002647 518 ----------------------------------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------------------------------a 518 (897)
-
T Consensus 321 v~~G~~c~~~~~~~~~~l~~~g~~~~~~~g~iRiS~~~~nt~edid~l~~~l~~~l~~lr~~~~~~~~~~~ 391 (391)
T d1p3wa_ 321 VSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLRDLSPLWEMYKQ 391 (391)
T ss_dssp CBCCCC------CCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHCC
T ss_pred EECCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCC
T ss_conf 98262003776540599997399810069889996678899999999999999999999973967786329
|
| >d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: 4-alpha-glucanotransferase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=29488.93 Aligned_cols=1 Identities=0% Similarity=-0.891 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~v~Yei~~~~F~d~~~dg~Gd~~gi~~kLdyl~~LGv~~I~l~Pi~~~~~~~GY~~~d~~~vd~~~Gt~~d~~~lv~~~h 80 (391)
T d1lwha2 1 MIGYQIYVRSFRDGNLDGVGDFRGLKNAVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFH 80 (391)
T ss_dssp CCEEEECGGGTCCSSSSSSCCHHHHHHTHHHHHHTTCSEEEECCCEECSSSSCCSCSEEEEECGGGCCHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 97999815610588999860999999855999975999899797987999999785577874712399999999999997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdln~~ 160 (391)
T d1lwha2 81 DSGIKVVLDLPIHHTGFLHTWFQKALKGDPHYRDYYVWANKETDLDERREWDGEKIWHPLEDGRFYRGLFGPFSPDLNYD 160 (391)
T ss_dssp HTTCEEEEEECTTBCCTTSHHHHHHHTTCHHHHTTBCBCCTTCCTTCBCSSSCCBCEEECTTSCEEECTTCTTSCBBCTT
T ss_pred HCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 35987844331013334444433223677655664200377545676546788754333677751236668867753433
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 n~~v~~~i~~~~~~w~e~gvDGfR~Daa~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 240 (391)
T d1lwha2 161 NPQVFDEMKRLVLHLLDMGVDGFRFDAAKHMRDTIEQNVRFWKYFLSDLKGIFLAEIWAEARMVDEHGRIFGYMLNFDTS 240 (391)
T ss_dssp SHHHHHHHHHHHHHHHHHTCCEEEETTGGGSSSSHHHHHHHHHHHHTTCCSEEEECCCSCSSSHHHHHHHHEEEECHHHH
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEECCCHH
T ss_conf 41146899998888760699700105588877764211588999998765300255411200011034446731134178
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~nhD~~~~~~~~~~~~~~~~~~a~~lllt~pG~P~IyyGdE~G~~~ 320 (391)
T d1lwha2 241 HCIKEAVWKENTRVLIESIERAVIAKDYLPVNFTSNHDMSRLASFEGGFSKEKIKLSISILFTLPGVPLVFYGDELGMKG 320 (391)
T ss_dssp HHHHHHHHHTCTHHHHHHHHHHTSSCSSEEEEESCCTTSCCGGGGGGCCCHHHHHHHHHHHTTSSSEEEEETTGGGTCCC
T ss_pred HHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCHHCCCCC
T ss_conf 89999874034899999998631467765000001555543334123201567999999862689987886143027768
Q ss_pred ----------------------------------------------------------------------E
Q ss_conf ----------------------------------------------------------------------8
Q 002647 518 ----------------------------------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~~~~r~pm~W~~~~~~~~~~~~~~~~~~~~~~~~nve~q~~~~~s~~~~~~~Li~lRk~~~al~r 391 (391)
T d1lwha2 321 VYQKPNTEVVLDPFPWNESMCVEGQTFWKWPAYNGPFSGISVEYQKRDPDSILSHTLGWTRFRKENQWIDR 391 (391)
T ss_dssp CCCSSCGGGGSCCCCSSTTSCSTTCCCSSCCSSCCSSSSCSHHHHTTCTTSHHHHHHHHHHHHHTCGGGGG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCHHHCC
T ss_conf 98899865311888878777788888887867897423117999875816899999999999813856239
|
| >d4ubpc2 c.1.9.2 (C:132-434,C:484-570) alpha-subunit of urease, catalytic domain {Bacillus pasteurii [TaxId: 1474]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: alpha-subunit of urease, catalytic domain domain: alpha-subunit of urease, catalytic domain species: Bacillus pasteurii [TaxId: 1474]
Probab=100.00 E-value=0 Score=29427.73 Aligned_cols=1 Identities=0% Similarity=-2.055 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 GgiDtHvHfi~Pqq~~~al~sGiTT~~GgGtGpa~gt~att~tpG~~~i~~ml~a~d~~P~N~g~~gkGn~s~~~~l~eq 80 (390)
T d4ubpc2 1 GGIDTHVHFINPDQVDVALANGITTLFGGGTGPAEGSKATTVTPGPWNIEKMLKSTEGLPINVGILGKGHGSSIAPIMEQ 80 (390)
T ss_dssp CEEEEEEECCCTTHHHHHHHTTEEEEEEECCSSCHHHHHSSCCCHHHHHHHHHHHHTTCSSEEEEEEECCCSSHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHH
T ss_conf 98220003348878999985697366468557777878745689888999999865527823115232666986799999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 i~aGa~GlKiHEDwGatpa~id~~L~vad~~dvqv~iHtDtlNE~gfve~T~~a~~gRtiH~~HtEGaGGGHaPDii~~~ 160 (390)
T d4ubpc2 81 IDAGAAGLKIHEDWGATPASIDRSLTVADEADVQVAIHSDTLNEAGFLEDTLRAINGRVIHSFHVEGAGGGHAPDIMAMA 160 (390)
T ss_dssp HHHTCCEEEEEGGGCCCHHHHHHHHHHHHHHTCEEEEECCTTCSSCCHHHHHHHHTTCCEEETTTTSTTSSSTTTGGGGG
T ss_pred HHHHHHEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHC
T ss_conf 98655005013113647789999999864059268985387510101165899867962111467888889883268763
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 g~~nvLpsSTnPT~Pyt~nt~~EhldM~MvcHhL~~~ipeDvafAesRiR~eTiaAEdvLHD~GaiSi~sSDsQaMGRvg 240 (390)
T d4ubpc2 161 GHPNVLPSSTNPTRPFTVNTIDEHLDMLMVCHHLKQNIPEDVAFADSRIRPETIAAEDILHDLGIISMMSTDALAMGRAG 240 (390)
T ss_dssp GSTTEEEBCCSTTSSCBTTHHHHHHHHHHHHHTCCTTSHHHHHHHHHHSCHHHHHHHHHHHHTTSSCBCCCCBTTSSCTT
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHCCEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCC
T ss_conf 77865578999887886672666367377641479888026777763033012326777652486444136753246400
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 Evi~Rtwq~A~kmk~qrG~l~~d~~~~DN~RvkRYiAKyTINPAIahGish~VGSvE~GKlADG~a~~~tsvtFVSqaAi 320 (390)
T d4ubpc2 241 EMVLRTWQTADKMKKQRGPLAEEKNGSDNFRLKRYVSKYTINPAIAQGIAHEVGSIEEGKFADGDLIHDTNITFMSKSSI 320 (390)
T ss_dssp CHHHHHHHHHHHHHHHHCSCTTCCSSCCHHHHHHHHHTTTHHHHHHHTCTTTSSSCCTTSBCCTTHHHHSCEEEECHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHH
T ss_conf 67776778898877751489875566777013202530246806750741125764678434876345764899858887
Q ss_pred ---------------------------------------------------------------------E
Q ss_conf ---------------------------------------------------------------------8
Q 002647 518 ---------------------------------------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------------------------------------a 518 (897)
-
T Consensus 321 d~Gi~e~LGL~k~l~pVkn~R~ItKkDMk~Nda~P~IeVDPETYeV~aDGelltcePA~~LPLAQRYFLF 390 (390)
T d4ubpc2 321 QQGVPAKLGLKRRIGTVKNCRNIGKKDMKWNDVTTDIDINPETYEVKVDGEVLTCEPVKELPMAQRYFLF 390 (390)
T ss_dssp HTTHHHHHTCCSEEEECCCCSSCCGGGSTTCCCCCCCEECTTTCCEEETTEECCCCCBSCCSSSTTTCCC
T ss_pred HCCCHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCEEECCCCEEEEECCEEECCCCCCCCCCHHCCCCC
T ss_conf 5777677088644886058887786785015789983689986689889999046876756630120177
|
| >d1v6sa_ c.86.1.1 (A:) Phosphoglycerate kinase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate kinase superfamily: Phosphoglycerate kinase family: Phosphoglycerate kinase domain: Phosphoglycerate kinase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=29426.27 Aligned_cols=1 Identities=100% Similarity=1.633 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 mktl~d~~~~~k~Vl~R~D~NvPi~~g~i~d~~RI~~~~pTI~~l~~~~akvii~SH~GRPkg~~~~~Sl~~v~~~l~~~ 80 (390)
T d1v6sa_ 1 MRTLLDLDPKGKRVLVRVDYNVPVQDGKVQDETRILESLPTLRHLLAGGASLVLLSHLGRPKGPDPKYSLAPVGEALRAH 80 (390)
T ss_dssp CCBGGGSCCTTCEEEEECCCCCCEETTEESCCHHHHHHHHHHHHHHHTTCEEEEECCCSCCSSCCGGGCSHHHHHHHHHH
T ss_pred CCCHHHCCCCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 97412258789999999403777559908976899999999999997899899995589999989761379999999752
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 l~~~v~~~~~~~~~~~~~~~~~l~~g~i~lLENvRF~~~E~~nd~~f~~~La~l~DiyVNDAF~~aHR~haS~vgi~~~l 160 (390)
T d1v6sa_ 81 LPEARFAPFPPGSEEARREAEALRPGEVLLLENVRFEPGEEKNDPELSARYARLGEAFVLDAFGSAHRAHASVVGVARLL 160 (390)
T ss_dssp CTTEEECCSCTTSHHHHHHHHTCCTTCEEECSCGGGSTTTTTTCHHHHHHHGGGCSEEEECCGGGTTSCCCCCCCGGGTS
T ss_pred CCCCEEEEECCCCCCCCCCCCCCCCCCEEEEHHHHHCCCCCCCCHHHHHHHHHCCCEEEECCHHHHHHHCCCCCCCHHHH
T ss_conf 46532653101122122222346665378651123245521165277776652476589631466665056622501333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ps~aG~l~ekEi~~L~~~l~~~~rP~vaIlGGaKvsdKi~~i~~l~~k~D~iiigG~mAntFL~a~G~~IG~sl~e~~~~ 240 (390)
T d1v6sa_ 161 PAYAGFLMEKEVRALSRLLKDPERPYAVVLGGAKVSDKIGVIESLLPRIDRLLIGGAMAFTFLKALGGEVGRSLVEEDRL 240 (390)
T ss_dssp CEEECHHHHHHHHHHHTTTSSCCSSEEEEECCSCGGGTHHHHHHHGGGCSEEEECSTTHHHHHHHTTCBCTTCCCCGGGH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEECCCHHHHHHHHCCCCCCCCHHHHHHH
T ss_conf 45668999999999999985446750899834640236999999997525666644177999997597668634431146
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~a~~~~~~i~lp~dv~~~~~~~~~~~~~~~~~~~i~~~~~ilDIG~~Ti~~~~~~I~~aktI~WNGPmGvfE 320 (390)
T d1v6sa_ 241 DLAKDLLGRAEALGVRVYLPEDVVAAERIEAGVETRVFPARAIPVPYMGLDIGPKTREAFARALEGARTVFWNGPMGVFE 320 (390)
T ss_dssp HHHHHHHHHHHHHTCEEECCSEEEEESSCCTTCCCEEEETTBCCTTCEEEEECHHHHHHHHHHTTTCSEEEEESCSSCTT
T ss_pred HHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
T ss_conf 66676777654302333333211220123677532356433310024432000134677887750264489975644502
Q ss_pred ---------------------------------------------------------------------E
Q ss_conf ---------------------------------------------------------------------8
Q 002647 518 ---------------------------------------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------------------------------------a 518 (897)
|
T Consensus 321 ~~~F~~GT~~i~~aia~~~~a~sIiGGGdT~aai~~~g~~~~fshVSTGGGA~Le~L~G~~LPgi~aL~~ 390 (390)
T d1v6sa_ 321 VPPFDEGTLAVGQAIAALEGAFTVVGGGDSVAAVNRLGLKERFGHVSTGGGASLEFLEKGTLPGLEVLEG 390 (390)
T ss_dssp STTTTHHHHHHHHHHHTCSSCEEEEESHHHHHHHHTTTCGGGSSEECCSSSHHHHHHHHSCCHHHHTTCC
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCCCEEECCHHHHHHHHCCCCCCCHHHHCC
T ss_conf 5743079999999998558997999488999999974986787179577899999977999642143159
|
| >d1nsca_ b.68.1.1 (A:) Influenza neuraminidase {Influenza B virus, different strains [TaxId: 11520]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Influenza neuraminidase species: Influenza B virus, different strains [TaxId: 11520]
Probab=100.00 E-value=0 Score=29423.13 Aligned_cols=1 Identities=0% Similarity=-1.324 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~r~ge~~~n~~~lVtREPyVSC~p~eC~~FaL~QGt~l~~kHSNgTi~DRsp~RtL 80 (390)
T d1nsca_ 1 EPEWTYPRLSCQGSTFQKALLISPHRFGEARGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTREDRNKLRHL 80 (390)
T ss_dssp CCCCCCCCCBCSCSSEEEEEEECGGGGCCTTSCCCBEEEEEEEEEECSSCEEEEEEEEEEESSSSCCTTTTCSCCSSCEE
T ss_pred CCCCCCCCEEECCCHHHHHHCCCCCCCCCCCCCCCEEEEECCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHEE
T ss_conf 97554451210452123420227210254446674069727601018430145862054111686668841456411201
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~s~~lG~~P~~~ns~f~~vaWSsssCHDGk~wl~i~vtG~d~nA~A~~~Y~g~~tdsI~SW~~nILRTQESeCvCinG~C 160 (390)
T d1nsca_ 81 ISVKLGKIPTVENSIFHMAAWSGSACHDGREWTYIGVDGPDSNALIKIKYGEAYTDTYHSYANNILRTQESACNCIGGDC 160 (390)
T ss_dssp EEEETTSCCBTTTCEEEEECSEEEEEECSSCEEEEEEESCGGGCEEEEEETTEEEEEEECSSSSCCEECSSCCEEETTEE
T ss_pred EECCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEECCEEEEEHHHHHHHHCCCCCCCEEEECCEE
T ss_conf 22326799965663379987652433688724899878698872899998999964055334310200432048989989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~vvMTDGpA~~~A~~ki~~i~eGkIi~~~~l~g~~~HiEECSC~Yp~~~~V~CVCRDNW~GsNRPvv~in~~~~s~~~gY 240 (390)
T d1nsca_ 161 YLMITDGSASGISKCRFLKIREGRIIKEIFPTGRVEHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRL 240 (390)
T ss_dssp EEEEEEECTTSCEEEEEEEEETTEEEEEECCEESCSBCEEEEEEESSSSEEEEEEECSSSCSSCEEEEEETTTTEEEEEE
T ss_pred EEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCEEEECCCCCEEEEEE
T ss_conf 99992688778542589998456288776058886724752115899881699970788888998499545534145315
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 vCSGl~~DTPR~~D~s~tg~C~~n~~~G~~GVKGgf~~~~~~~~~~vW~GRTiS~~SRSGfE~~kV~~gw~~~~s~~~~~ 320 (390)
T d1nsca_ 241 MCTETYLDTPRPDDGSITGPCESNGDKGRGGIKGGFVHQRMASKIGRWYSRTMSKTERMGMELYVRYDGDPWTDSDALAH 320 (390)
T ss_dssp CCCSSCCSSSCCCTTCCCSSTTCCCSCCSSCCCCCEEEEECSSCEEEEEEECSSSSSSEEEEEEEEESSCTTTCCCCCEE
T ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEE
T ss_conf 85366578999888887767888876888863565011012468874764420476667507999778987768620005
Q ss_pred ---------------------------------------------------------------------E
Q ss_conf ---------------------------------------------------------------------8
Q 002647 518 ---------------------------------------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~q~iV~~~n~sgYSg~F~~~~k~C~~pCF~VElIRGrp~e~WTSnS~vvfCg~~s~~~~wswpDGA~i~l 390 (390)
T d1nsca_ 321 SGVMVSMKEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKKTWHSAATAIYCLMGSGQLLWDTVTGVDMAL 390 (390)
T ss_dssp EEEEEEEEEECCCEEEEEEECSSSEEEEEEEEEEECCCTTSCCEEEEEEEEECSSSCCCCCCCCCCCTTC
T ss_pred EEEEEECCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCEECCCEEEEECCCCCCCCCCCCCCCCCCC
T ss_conf 7899953788862178998589853022899997288766501375699972589977866998656689
|
| >d1qopb_ c.79.1.1 (B:) Tryptophan synthase, beta-subunit {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Tryptophan synthase, beta-subunit species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=0 Score=29419.90 Aligned_cols=1 Identities=0% Similarity=-1.523 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~g~~gg~~~pe~l~~~~~~l~~~~~~~~~~~~f~~e~~~~~~~~~grpTPL~~~~~Ls~~lg~~IylK~E~ln 80 (390)
T d1qopb_ 1 TTLLNPYFGEFGGMYVPQILMPALNQLEEAFVSAQKDPEFQAQFADLLKNYAGRPTALTKCQNITAGTRTTLYLKREDLL 80 (390)
T ss_dssp CCSSCCEETTEEEEESCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCSCCEEECHHHHTTSSEEEEEEEGGGS
T ss_pred CCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHEHHHHHHHHCCEEEEEEECCC
T ss_conf 98777865683999687888999999999999997397899999999874489996553758654535977999971487
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ptGS~K~R~a~~~i~~A~~~G~~~iv~easaGN~g~a~A~aaa~~Gl~~~I~mp~~~~~~k~~~v~~m~~~GAeVv~v~~ 160 (390)
T d1qopb_ 81 HGGAHKTNQVLGQALLAKRMGKSEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHS 160 (390)
T ss_dssp TTSBTHHHHHHHHHHHHHHTTCCEEEEEESSSHHHHHHHHHHHHHTCEEEEEEEHHHHHHCHHHHHHHHHTTCEEEEECS
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECC
T ss_conf 44656604899999987543873023103477899999999985367459963320011235888999865966999527
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~e~~~q~~~~~g~~pD~vv~~vGgGs~~~G~~ 240 (390)
T d1qopb_ 161 GSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQILDKEGRLPDAVIACVGGGSNAIGMF 240 (390)
T ss_dssp TTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHHHHTTTHHHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHEE
T ss_conf 85136676999999976333555530343234334654110156655012389999970986306886235410111100
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~f~~~~~~~~ig~ep~~~g~~~~~~~a~~~~g~~g~~~~~~~~~~~~~~g~~~~~~s~a~gl~~~~~~~~~~~l~~~g~ 320 (390)
T d1qopb_ 241 ADFINDTSVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFGMKAPMMQTADGQIEESYSISAGLDFPSVGPQHAYLNSIGR 320 (390)
T ss_dssp GGGTTCTTSEEEEEEEEETBGGGTBSCCHHHHSEEEEETEEEEEECBCTTSCBCCCCCSSGGGCCSSCCHHHHHHHHTTS
T ss_pred CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
T ss_conf 11004663248613566356565444551035744554112454113688864443222455334662067899986286
Q ss_pred ---------------------------------------------------------------------E
Q ss_conf ---------------------------------------------------------------------8
Q 002647 518 ---------------------------------------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~vtD~Ea~~a~~~La~~EGI~~a~Esa~Ava~Ai~~a~~~~~~~~~VVv~lsG~G~kD~~~~~~~l 390 (390)
T d1qopb_ 321 ADYVSITDDEALEAFKTLCRHEGIIPALESSHALAHALKMMREQPEKEQLLVVNLSGRGDKDIFTVHDIL 390 (390)
T ss_dssp SEEEEEEHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHHHHSTTSCEEEEEEECBBCGGGHHHHHHHC
T ss_pred EEEEEECHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHC
T ss_conf 3999999999999999999966984168269999999998635579998899997889734799999639
|
| >d1oj7a_ e.22.1.2 (A:) Hypothetical oxidoreductase yqhD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Dehydroquinate synthase-like superfamily: Dehydroquinate synthase-like family: Iron-containing alcohol dehydrogenase domain: Hypothetical oxidoreductase yqhD species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29416.26 Aligned_cols=1 Identities=0% Similarity=0.570 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~m~~f~f~~P~~I~fG~g~l~~l~~~~~~~~~vliV~~~~~~~~~g~~~~v~~~L~~~~~~~f~~v~~~p~~~~v~~~ 80 (390)
T d1oj7a_ 1 KAGLNNFNLHTPTRILFGKGAIAGLREQIPHDARVLITYGGGSVKKTGVLDQVLDALKGMDVLEFGGIEPNPAYETLMNA 80 (390)
T ss_dssp CBCCCCEEEEEEEEEEESTTGGGGHHHHSCTTCEEEEEECSSHHHHHSHHHHHHHHTTTSEEEEECCCCSSCBHHHHHHH
T ss_pred CCCCCCCEEECCCEEEECCCHHHHHHHHHHCCCCEEEEECCCHHHHCCHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHH
T ss_conf 99888808748986898569999999998679988999897168774399999997189947999282379999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~D~IIavGGGs~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~VPTtagtgse~t~~avi~~~~~ 160 (390)
T d1oj7a_ 81 VKLVREQKVTFLLAVGGGSVLDGTKFIAAAANYPENIDPWHILQTGGKEIKSAIPMGCVLTLPATGSESNAGAVISRKTT 160 (390)
T ss_dssp HHHHHHHTCCEEEEEESHHHHHHHHHHHHHTTSCTTSCTTHHHHTTTTTCCCCCCEEEEESSCSSCGGGSSEEEEEETTT
T ss_pred HHHHHHCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99976337877985478854408999999751874300344312466433467873335665443111243101124443
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~k~~~~~~~~~P~~~i~Dp~l~~~~P~~~~~~~~~Dal~h~~E~~~s~~~~~~~~~~~a~~~~~~~~~~l~~a~~~~~d 240 (390)
T d1oj7a_ 161 GDKQAFHSAHVQPVFAVLDPVYTYTLPPRQVANGVVDAFVHTVEQYVTKPVDAKIHDRFAEGILLTLIEDGPKALKEPEN 240 (390)
T ss_dssp TEEEEEECGGGSCSEEEECGGGGTTCCHHHHHHHHHHHHHHHHHHHSSSCBCCHHHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred CCEECCCHHHCCCCEEEEHHHHCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCC
T ss_conf 11000110000145046514430369744430322558888889871775321230367765555530134777760446
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~ar~~l~~as~~a~~~~~~~g~~~~g~~Hal~h~l~~~~~v~HG~~~ai~lp~v~~~~~~~~~~~~~~~a~~~~~~~~~ 320 (390)
T d1oj7a_ 241 YDVRANVMWAATQALNGLIGAGVPQDWATHMLGHELTAMHGLDHAQTLAIVLPALWNEKRDTKRAKLLQYAERVWNITEG 320 (390)
T ss_dssp HHHHHHHHHHHHHHSSSTTTTTSCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 89999888888998865540486666531344334310268765311233221332001111599999999995485469
Q ss_pred ---------------------------------------------------------------------E
Q ss_conf ---------------------------------------------------------------------8
Q 002647 518 ---------------------------------------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~e~~~~~i~~i~~~~~~lglP~~L~e~Gv~~~~i~~la~~~~~~~~~~~~np~~l~~d~i~~il~~A~ 390 (390)
T d1oj7a_ 321 SDDERIDAAIAATRNFFEQLGVPTHLSDYGLDGSSIPALLKKLEEHGMTQLGENHDITLDVSRRIYEAAR 390 (390)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTCCCSGGGGTCCSTTHHHHHHHHHHTTCSSBTTTTCBCHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHCC
T ss_conf 9699999999999999998498999899199999999999999863555309997899999999999509
|
| >d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus sp., ksm-k38 [TaxId: 1409]
Probab=100.00 E-value=0 Score=29416.66 Aligned_cols=1 Identities=0% Similarity=0.039 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~i~~kLdyLk~LGvt~I~l~Pi~~~~~~~~~gY~~~d~~~~~~~~~~~~vd~~~Gt~ 80 (390)
T d1ud2a2 1 DGLNGTMMQYYEWHLENDGQHWNRLHDDAAALSDAGITAIWIPPAYKGNSQADVGYGAYDLYDLGEFNQKGTVRTKYGTK 80 (390)
T ss_dssp CCCCCCEEECCCTTCCCSSCHHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCH
T ss_pred CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 99777699844057788897799999979999976998899697803888889998866774445554457768889999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~efk~lV~~~H~~GI~VilDvV~NHt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (390)
T d1ud2a2 81 AQLERAIGSLKSNDINVYGDVVMNHKMGADFTEAVQAVQVNPTNRWQDISGAYTIDAWTGFDFSGRNNAYSDFKWRWFHF 160 (390)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCSEECCCSEEEEEEEEEEETTEEEEECSCCEEEEEEEEBCCGGGTTSSCCCCBCGGGE
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999999998558813898714554676630344420268654332345543445554556776677678776543445
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~dg~r~D~~~~~~~~~ 240 (390)
T d1ud2a2 161 NGVDWDQRYQENHIFRFANTNWNWRVDEENGNYDYLLGSNIDFSHPEVQDELKDWGSWFTDELDLDGYRLDAIKHIPFWY 240 (390)
T ss_dssp EEEEEETTTTEEEEEEETTCCCCSSCCCTTSCCCCCSSEEECTTSHHHHHHHHHHHHHHHHHHTCSEEEETTGGGSCHHH
T ss_pred CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCHHHCCHHH
T ss_conf 78876655777751211687655555422222222334410004889999988765301210124653334320067677
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (390)
T d1ud2a2 241 TSDWVRHQRNEADQDLFVVGEYWKDDVGALEFYLDEMNWEMSLFDVPLNYNFYRASQQGGSYDMRNILRGSLVEAHPMHA 320 (390)
T ss_dssp HHHHHHHHHHHCSSCCEEEECCCCSCHHHHHHHHHHTTTCSEEECHHHHHHHHHHHHHCTTSCGGGTTTTCHHHHCGGGE
T ss_pred HHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCE
T ss_conf 88888887643202103411124786110101245432333203678889999875134469999987533033783326
Q ss_pred ---------------------------------------------------------------------E
Q ss_conf ---------------------------------------------------------------------8
Q 002647 518 ---------------------------------------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------------------------------------a 518 (897)
-
T Consensus 321 v~fl~nHD~~r~~~~~~~~~~~~~~~~~~~il~~~pG~P~iy~GdE~G~~~~~~~~~~d~i~~l~~~R~~ 390 (390)
T d1ud2a2 321 VTFVDNHDTQPGESLESWVADWFKPLAYATILTREGGYPNVFYGDYYGIPNDNISAKKDMIDELLDARQN 390 (390)
T ss_dssp EECSCCTTTSTTSTTCCCCCTTTHHHHHHHHHSSSSSEEEEEHHHHHCBGGGTBCCCHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECHHHCCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf 8870277665400013675789999999999985799849974265097998985126888999997389
|
| >d1e9yb2 c.1.9.2 (B:132-431,B:481-569) alpha-subunit of urease, catalytic domain {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: alpha-subunit of urease, catalytic domain domain: alpha-subunit of urease, catalytic domain species: Helicobacter pylori [TaxId: 210]
Probab=100.00 E-value=0 Score=29350.14 Aligned_cols=1 Identities=0% Similarity=-2.055 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 GiDtHvHfi~Pqq~~~al~sGiTT~iGgGtGPa~Gt~att~tpg~~~i~~ml~a~d~~P~N~g~~gkGn~s~~~~l~eqi 80 (389)
T d1e9yb2 1 GIDTHIHFISPQQIPTAFASGVTTMIGGGTGPADGTNATTITPGRRNLKWMLRAAEEYSMNLGFLAKGNASNDASLADQI 80 (389)
T ss_dssp EEEEEEETTCTTHHHHHHHTTEEEEEEECCSSCHHHHHCCCCCHHHHHHHHHHHHTTSSSEEEEEEECCCSCHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHH
T ss_conf 95545334488789999856870774586588877776552797608999998600377253662116779837899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~aGa~GlKiHEDwGatp~~Id~~L~vad~~dvqv~iHtDtlNE~Gfve~T~~a~~gRtiH~~HtEGaGGGHAPDii~~~~ 160 (389)
T d1e9yb2 81 EAGAIGFKIHEDWGTTPSAINHALDVADKYDVQVAIHTDTLNEAGCVEDTMAAIAGRTMHTFHTEGAGGGHAPDIIKVAG 160 (389)
T ss_dssp HTTCSEEEECGGGCCCHHHHHHHHHHHHHTTCEEEECCCTTCSSCCHHHHHHHHTTCCEEETTTTSTTSCSTTTGGGGGG
T ss_pred HHCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHCC
T ss_conf 72303220231026787888899998775095389438976654303648998679752003137777777617888705
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~nvLpsSTnPT~Pyt~nt~~EhldMlmvcHhL~~~ipeDvafAesRiR~eTIaAEdvLhD~GaiSi~sSDsqaMGRvgE 240 (389)
T d1e9yb2 161 EHNILPASTNPTIPFTVNTEAEHMDMLMVCHHKDKSIKEDVQFADSRIRPQTIAAEDTLHDMGAFSITSSDSQAMGRVGE 240 (389)
T ss_dssp STTEEEEECGGGCSCBTTHHHHHHHHHHHTTTCCSSCHHHHHHHHHHCCHHHHHHHHHHHHTTSCCEECCCTTSSCCTTS
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHCHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHH
T ss_conf 77766788999878666628886345241034798980267777630330223367776336854531366644443677
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 vi~RtwQtA~kmk~~rG~l~~d~~~~DN~RvkRYiAKYTINPAIahGis~~VGSvE~GK~a~G~A~~~tSvtFVSqaAid 320 (389)
T d1e9yb2 241 VITRTWQTADKNKKEFGRLKEEKGDNDNFRIKRYLSKYTINPAIAHGISEYVGSVEVGKVHHGKAKYDANITFVSQAAYD 320 (389)
T ss_dssp HHHHHHHHHHHHHHHHCSCSSCCSSSCHHHHHHHHGGGTHHHHHHTTCTTTSSSSCTTSBGSTTHHHHHCEEEECHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHCCCHHCCCCCCCCCCCCCCCCCCCEEEEECHHHHH
T ss_conf 89999998999998863687667776427777666650568577558211048625366135867665635886688875
Q ss_pred --------------------------------------------------------------------E
Q ss_conf --------------------------------------------------------------------8
Q 002647 518 --------------------------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~Gi~~~LGL~K~l~pVkn~R~ItK~DM~~Nda~P~IeVDPETYeV~aDGelltcePA~~LPLAQRYFLF 389 (389)
T d1e9yb2 321 KGIKEELGLERQVLPVKNCRNVTKKDMQFNNTTAHIEVNPETYHVFVDGKEVTSKPANKVSLAQLFSIF 389 (389)
T ss_dssp TTHHHHTTCCSEEEECCCCSSCCGGGSTTCCCCCCEEECTTTCCEEETTEECCCCCBSCCSSSTTTCCC
T ss_pred CCCHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCEEECCCCEEEEECCEECCCCCCCCCCCHHCCCCC
T ss_conf 787677387752786138887887785115789982689997689889999135765657630110177
|
| >d1sg6a_ e.22.1.1 (A:) Dehydroquinate synthase, DHQS {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Dehydroquinate synthase-like superfamily: Dehydroquinate synthase-like family: Dehydroquinate synthase, DHQS domain: Dehydroquinate synthase, DHQS species: Aspergillus nidulans [TaxId: 162425]
Probab=100.00 E-value=0 Score=29342.17 Aligned_cols=1 Identities=0% Similarity=-0.127 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 p~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~ivtD~~v~~l~~~~v~~~l~~~~~~~~~~~~~~~~~~~~gE~~ 80 (389)
T d1sg6a_ 1 PTKISILGRESIIADFGLWRNYVAKDLISDCSSTTYVLVTDTNIGSIYTPSFEEAFRKRAAEITPSPRLLIYNRPPGEVS 80 (389)
T ss_dssp CEEEEETTEEEEEEETTHHHHTHHHHHHHHSCCSEEEEEEEHHHHHHHHHHHHHHHHHHHHHSSSCCEEEEEEECSSGGG
T ss_pred CCEEEECCCCCEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC
T ss_conf 91688769731898888078775999984179981899978965898999999999870742146762489981698452
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 Ks~~~~~~i~~~~~~~~~~~~r~d~IiaiGGG~v~D~ak~~A~~y~rgi~~i~vPTtlla~~Das~g~k~~in~~~~kn~ 160 (389)
T d1sg6a_ 81 KSRQTKADIEDWMLSQNPPCGRDTVVIALGGGVIGDLTGFVASTYMRGVRYVQVPTTLLAMVDSSIGGKTAIDTPLGKNL 160 (389)
T ss_dssp SSHHHHHHHHHHHHTSSSCCCTTCEEEEEESHHHHHHHHHHHHHGGGCCEEEEEECSHHHHHTTTSSCEEEEEETTEEEE
T ss_pred CCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEECCCHHCCCCCCCCCEEEECCCCCCCE
T ss_conf 89999999999999628876777569996563477889999999855876367314021256653232134211366421
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~g~~~~P~~V~iD~~~l~tlP~r~~~aG~~e~ik~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~I 240 (389)
T d1sg6a_ 161 IGAIWQPTKIYIDLEFLETLPVREFINGMAEVIKTAAISSEEEFTALEENAETILKAVRREVTPGEHRFEGTEEILKARI 240 (389)
T ss_dssp EEEECCCSEEEEEGGGGGTSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCCCCTTSCTTGGGHHHHHHHH
T ss_pred EEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHH
T ss_conf 21012045552005554341799998634235553212687888899986999987544201201322104699999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~s~~~k~~iv~~d~~e~g~r~~ln~GHt~~HAlE~~~~~~~lHGEaVaiGml~~~~ls~~~g~l~~~~~~~i~~~l~~l 320 (389)
T d1sg6a_ 241 LASARHKAYVVSADEREGGLRNLLNWGHSIGHAIEAILTPQILHGECVAIGMVKEAELARHLGILKGVAVSRIVKCLAAY 320 (389)
T ss_dssp HHHHHHHHHHHHC-----CGGGGGGTTHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
T ss_conf 99999863202333443263310135466788887632234568889998899999999993799999999999999986
Q ss_pred --------------------------------------------------------------------E
Q ss_conf --------------------------------------------------------------------8
Q 002647 518 --------------------------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------------------------a 518 (897)
+
T Consensus 321 gLPt~l~dl~~~~~~~~~~~~~~~l~~~~~~DKK~~~~~i~~vl~~~iG~~~~~~~~~~~~~~i~~~L~ 389 (389)
T d1sg6a_ 321 GLPTSLKDARIRKLTAGKHCSVDQLMFNMALDKKNDGPKKKIVLLSAIGTPYETRASVVANEDIRVVLA 389 (389)
T ss_dssp TCCCSTTCHHHHHHTTTCCCCHHHHHHHHHTCCE-------ECCEEETTEESSSSCEECCHHHHHHHCC
T ss_pred CCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEECCCCCCHHHHHHHHC
T ss_conf 999654344200013434599999999986378857997899967457767663277599899999739
|
| >d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: AAT homologue TM1698 species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=29341.69 Aligned_cols=1 Identities=0% Similarity=-0.925 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~r~~~~~~~~i~~l~~~a~~~~~~g~~vi~l~~G~p~~~~p~~~~~al~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~ 80 (389)
T d2gb3a1 1 FSDRVLLTEESPIRKLVPFAEMAKKRGVRIHHLNIGQPDLKTPEVFFERIYENKPEVVYYSHSAGIWELREAFASYYKRR 80 (389)
T ss_dssp CCHHHHSCCCCTTGGGHHHHHHHHHTTCEEEECSSCCCCSCCCTHHHHHHHHTCCSSCCCCCTTCCHHHHHHHHHHHHHT
T ss_pred CCHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 97456348987788899999999976998888989989999889999999850777778899868999999999998886
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~g~~~~~~~I~it~G~~~~l~~~~~~l~~~gd~V~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (389)
T d2gb3a1 81 QRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAIPQNLESFINERT 160 (389)
T ss_dssp SCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCCCTTGGGGCCTTE
T ss_pred CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC
T ss_conf 39876552699625543221222112235798688707987433432113686321232222355420245554215674
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~l~nP~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~v~~s~sK~~~~~GlRiG~ 240 (389)
T d2gb3a1 161 KGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACGARVGC 240 (389)
T ss_dssp EEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGGGCCEE
T ss_pred CEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 07984798766443210899999984234499999994131002323322222222223443345565334576563132
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~~g~~~~~~l 320 (389)
T d2gb3a1 241 LITRNEELISHAMKLAQGRLAPPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEHGLKRFTKPSGAFYITAEL 320 (389)
T ss_dssp EECSCHHHHHHHHHHHHHSCCCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCCCSBSSEEEEEC
T ss_pred EECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEC
T ss_conf 51100268998766420122223222222222322320002232333321002344445430463236999558999958
Q ss_pred --------------------------------------------------------------------E
Q ss_conf --------------------------------------------------------------------8
Q 002647 518 --------------------------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------------------------a 518 (897)
+
T Consensus 321 p~~~~~~~~~~ll~e~~l~~~~v~v~pg~~f~~~~~~~~~~iRis~~~~~~~l~~a~~~L~~~lk~f~~ 389 (389)
T d2gb3a1 321 PVEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACVLEKDLLSRAIDVLMEGLKMFCS 389 (389)
T ss_dssp SSSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECCSCHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 999999999999986006329789994750146888889989999728999999999999999999619
|
| >d1jiha2 e.8.1.7 (A:1-389) DNA polymerase eta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: DNA/RNA polymerases superfamily: DNA/RNA polymerases family: Lesion bypass DNA polymerase (Y-family), catalytic domain domain: DNA polymerase eta species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=29339.83 Aligned_cols=1 Identities=0% Similarity=-0.891 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~l~~~~~~~~~~~~vI~hiDmD~FyAsvE~~~~p~l~~~Pv~V~q~~~via~sYeAR~~GVk~gm~~~eA 80 (389)
T d1jiha2 1 MSKFTWKELIQLGSPSKAYESSLACIAHIDMNAFFAQVEQMRCGLSKEDPVVCVQWNSIIAVSYAARKYGISRMDTIQEA 80 (389)
T ss_dssp CCSSBHHHHHGGGCTTTGGGSTTCCEEEEECTTHHHHHHHHHTTCCTTSCEEEEETTEEEEECHHHHTTTCCTTSCHHHH
T ss_pred CCCCCHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCEEEEECCEEEEECHHHHHHCCCCCCCHHHH
T ss_conf 98413645877279752236877679997365089989967563526997799008869998999997199878929999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~k~CP~li~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~Yr~~S~~v~~il~~~~~~vE~~SIDEaflD 160 (389)
T d1jiha2 81 LKKCSNLIPIHTAVFKKGEDFWQYHDGCGSWVQDPAKQISVEDHKVSLEPYRRESRKALKIFKSACDLVERASIDEVFLD 160 (389)
T ss_dssp HHHCTTCEEEECCEEETTCSSEECCTTCSTTCSCTTSCCCSSSEEECCHHHHHHHHHHHHHHHHHCSCEEEEETTEEEEE
T ss_pred HHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEE
T ss_conf 98697636852121234444333344320001331001465326898899999999999999986888057416637897
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 lT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 240 (389)
T d1jiha2 161 LGRICFNMLMFDNEYELTGDLKLKDALSNIREAFIGGNYDINSHLPLIPEKIKSLKFEGDVFNPEGRDLITDWDDVILAL 240 (389)
T ss_dssp CHHHHHHHHHHCCSCBSSSSCBHHHHTHHHHHHHHHCCSCTTSBCCCCCGGGGGCCCCSEECCTTCCCSCCSHHHHHHHH
T ss_pred CCHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 50023220355431000122112332212345433332233234456642111222244433433344444356654028
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 g~~ia~~IR~~I~~etGlt~S~GIa~NK~LAKlAs~~~KPngqtvl~~~~v~~fl~~~~lpi~ki~GIG~k~~kkL~~~l 320 (389)
T d1jiha2 241 GSQVCKGIRDSIKDILGYTTSCGLSSTKNVCKLASNYKKPDAQTIVKNDCLLDFLDCGKFEITSFWTLGGVLGKELIDVL 320 (389)
T ss_dssp HHHHHHHHHHHHHHHHCCCCEEEEESSHHHHHHHHTTTCSSCEEECCGGGHHHHHTSSSCCGGGSGGGSSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHH
T ss_conf 99999999999999869984302455289999988744988558667899999997267872020787889999999984
Q ss_pred --------------------------------------------------------------------E
Q ss_conf --------------------------------------------------------------------8
Q 002647 518 --------------------------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------------------------a 518 (897)
-
T Consensus 321 gi~t~~di~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~f~l~Rg~~~~pv~~r 389 (389)
T d1jiha2 321 DLPHENSIKHIRETWPDNAGQLKEFLDAKVKQSDYDRSTSNIDPLKTADLAEKLFKLSRGRYGLPLSSR 389 (389)
T ss_dssp TCCSSSHHHHHHHHSCSCHHHHHHHHHHHHTSTTCCTTTCSSCTTCHHHHHHHHHHHTTTCCCCCCCCC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
T ss_conf 897613399987653688999855000655541068776555753244248888644147638888889
|
| >d2o3ia1 e.73.1.1 (A:2-390) Hypothetical protein CV3147 {Chromobacterium violaceum [TaxId: 536]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: CV3147-like superfamily: CV3147-like family: CV3147-like domain: Hypothetical protein CV3147 species: Chromobacterium violaceum [TaxId: 536]
Probab=100.00 E-value=0 Score=29335.06 Aligned_cols=1 Identities=0% Similarity=-0.161 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~Ls~~Dl~~i~~Ga~iLGtGGGGdp~~~~~l~~~~~~~~~~~~~~V~li~~del~D~~~V~v~~mGAPtv~~E~~~~~ 80 (389)
T d2o3ia1 1 AFELSPSDLEPLLQGACFFGSGGGGTMISARHLAANFRKGDYYPTDKVRVVDVDEATDGDCVMVAYMGAPDAINQVQWPN 80 (389)
T ss_dssp CEEECGGGHHHHHHHHHHTTTTCSCCHHHHHHHHTTCSBTTTBSCSCEEEECGGGCCSSEEEEEEEEECHHHHTTCSSCH
T ss_pred CCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEECHHHCCCCCEEEEEEEECCHHHHEECCCC
T ss_conf 93757999999851459997278876688999999986642257996699535336888899997640787883405799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~e~~~a~~~l~~~~g~~~~av~~~EiGG~Ns~~pl~~AA~~glPvVDaD~mGRAfPelqm~t~~i~G~~~~P~~lad~ 160 (389)
T d2o3ia1 81 GPVEAALAARQRLESQGRKLAYVVAPESGALGFVVASLVAAKLGLAVVDADGAGRAVPSLPMLTYAAAGVPPTPAFLAGE 160 (389)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHTCEEESBCSSSSCCSSGGGSHHHHTTCCCCSEEEECS
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCHHHEEHEECCCCCCCEEEECC
T ss_conf 75799999999999719975799951668722789999999719988747875456774322000105899887699728
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~Gn~~i~~~~~~~~~~~~~e~~~~~~e~~~R~~~~~~~~Gg~~~~a~~pm~~~~~~~~~~I~gTlS~A~~iGrav~~ar~ 240 (389)
T d2o3ia1 161 SGLCVELGVRMPPPDGQRREDISTVVEQMLRPILTNPQFGQFGGLAMWMMSPAQLGGALPVRGTLSRALKLGRALQDGKV 240 (389)
T ss_dssp SSCEEEEEEECCCCC---CCCHHHHHHHHHHHHTTSTTTCSEEEEEEEEECHHHHHHHCCSBSHHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99779984023555412577899999998877766875174347862659989983201168559999999899998664
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~l~~~~~~~g~~~l~~Gki~~v~r~~~~Gf~~G~v~ieg~~~~~~i~fqNE~L~a~~~g~~~~la~vPDLI~ 320 (389)
T d2o3ia1 241 KTAEAMLDFLRRELDIKGKLLFGPATLASPEVSTAGGFDLGKVVLEDGERRCTVLYQNESLLAWDSALSHPLATAPDAIS 320 (389)
T ss_dssp CSHHHHHHHHHHHHCCCCEEEEEEEEECCC----------CEEEEESSSCEEEEEESSSEEEEEETTCSSCSEETTSEEE
T ss_pred CCCCHHHHHHHHHCCCCCCEEEEEEEEEEEEEECCCCCEEEEEEEECCCEEEEEEEEECEEEEEECCCCCEEEECCCEEE
T ss_conf 24327999998732667868999689997799705871789999907985899999814189998798978997796799
Q ss_pred --------------------------------------------------------------------E
Q ss_conf --------------------------------------------------------------------8
Q 002647 518 --------------------------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------------------------a 518 (897)
=
T Consensus 321 ~lD~~tG~pitte~~~~~~~~g~~~~ryG~~V~Vi~~pa~~~wrt~~~l~~~GP~~~~fGy~~~y~P~e 389 (389)
T d2o3ia1 321 YFVEGEGQHVFSNGDLSGNDHGLDPSVRGRKAAVIALPAAAPLSEGLILQSFADELAQLGYLGPYAPVD 389 (389)
T ss_dssp EEECSSSCCCCCHHHHBCSSSSBCTTTTTSEEEEEEECCCGGGSSHHHHHHHHHHHHHTTCCSCCCCCC
T ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHCCHHHHHHCCCHHHHCCCCCCCCCCC
T ss_conf 986688864423332345556654234798899999609827486333655095055359997765288
|
| >d1f8ea_ b.68.1.1 (A:) Influenza neuraminidase {Influenza A virus, different strains [TaxId: 11320]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Influenza neuraminidase species: Influenza A virus, different strains [TaxId: 11320]
Probab=100.00 E-value=0 Score=29273.41 Aligned_cols=1 Identities=100% Similarity=0.105 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~~n~~kplC~i~G~a~~sKDN~IRig~~g~i~V~REPyVSC~p~eC~~FaL~QGa~l~~kHSNgTi~DRsp~RtL~s~ 80 (388)
T d1f8ea_ 1 RDFNNLTKGLCTINSWHIYGKDNAVRIGEDSDVLVTREPYVSCDPDECRFYALSQGTTIRGKHSNGTIHDRSQYRALISW 80 (388)
T ss_dssp CCCCCCCCEECCCSEEEEEEECCHHHHHTTSCBEEEEEEEEEEETTEEEEEEEEEEEESSSGGGTTTTCSCCTTCEEEEE
T ss_pred CCHHHCCCCCCCCCCEEEEECCCCEEECCCCCEEEEECCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHEEEEC
T ss_conf 94011376666433146661477168638987899826512028202034762043101786668841566510113441
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~lG~~p~~~ns~f~~vaWSsssCHDGk~Wl~i~vtG~D~nA~A~~~Y~g~~tdti~SW~~nILRTQESeCvCinG~C~vv 160 (388)
T d1f8ea_ 81 PLSSPPTVYNSRVECIGWSSTSCHDGKTRMSICISGPNNNASAVIWYNRRPVTEINTWARNILRTQESECVCHNGVCPVV 160 (388)
T ss_dssp ETTSCCBTTTCEEEEESSEEEEEECSSSEEEEEEESCTTSCEEEEEETTEEEEEEECSSSSCCBCCSSCCCCBTTEEEEE
T ss_pred CCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEECCEEEEHHHHHHHHHCCCCCCCEEEECCEEEEE
T ss_conf 26899966774589998643444689724899878798883799998999963265444311100322048989988999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 mTDG~A~~~A~~ri~~i~eGkIik~~~l~g~~~HiEECSCYp~~~~V~CvCRDNW~GsNRP~v~in~~~~~~~~~YvCsg 240 (388)
T d1f8ea_ 161 FTDGSATGPAETRIYYFKEGKILKWEPLAGTAKHIEECSCYGERAEITCTCRDNWQGSNRPVIRIDPVAMTHTSQYICSP 240 (388)
T ss_dssp EEEECSSSCEEEEEEEEETTEEEEEEECCSSCCCCEEEEEEEETTEEEEEEECCSSCSSCEEEEEETTTTEEEEEECCCS
T ss_pred EECCCCCCCCCEEEEEEECCEEEEEEECCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCEEEECCCCCEEEEEEEECC
T ss_conf 92688778631589998566388876169886731763422899946999706888888975995455431443278646
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~DTPR~~D~s~g~C~~p~~~~g~~GVKGf~f~~G~~vW~GRTiS~~sRsGfE~~~v~~gwt~~~s~~~~~q~iv~n~n 320 (388)
T d1f8ea_ 241 VLTDNPRPNDPTVGKCNDPYPGNNNNGVKGFSYLDGVNTWLGRTISIASRSGYEMLKVPNALTDDKSKPTQGQTIVLNTD 320 (388)
T ss_dssp SCCSSSCCCCCSSCCSSSCCCSCCSCCCCCCEECCTTSCEEEECSCSSSSEEEEEEECTTTTTCTTCCCSEEEEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCEEEEECCCCCCCCHHHHCCEEEEECCC
T ss_conf 44789998988866478987778888734314766897687664247667761699934875276603204228996587
Q ss_pred -------------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------------a 518 (897)
-
T Consensus 321 wSGYSGsF~~~~~~~~C~~pCFyVElIRGrp~E~~v~WTSnSiv~fCG~~~~~g~~swpDGA~i~ff~ 388 (388)
T d1f8ea_ 321 WSGYSGSFMDYWAEGECYRACFYVELIRGRPKEDKVWWTSNSIVSMCSSTEFLGQWDWPDGAKIEYFL 388 (388)
T ss_dssp ECCCEEEECCTTCSSSEECCEEEEEEEEETTTCTTSSCEEEEEEEEEEESSCCCCCCCCCCCCGGGGC
T ss_pred CCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 77561771234348873011489999618876563467407779993679986786689865465559
|
| >d1u7la_ e.57.1.1 (A:) Vacuolar ATP synthase subunit C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Vacuolar ATP synthase subunit C superfamily: Vacuolar ATP synthase subunit C family: Vacuolar ATP synthase subunit C domain: Vacuolar ATP synthase subunit C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=29271.03 Aligned_cols=1 Identities=0% Similarity=-2.188 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~~~~y~lvSlP~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~f~IP~lKvGTLDsLv~lsDeL~KlD~~ve~vv~Kv~~ 80 (388)
T d1u7la_ 1 LYTANDFILISLPQNAQPVTAPGSKTDSWFNETLIGGRAFVSDFKIPEFKIGSLDTLIVESEELSKVDNQIGASIGKIIE 80 (388)
T ss_dssp CCCCCEEEEEEEETTCCCTTSTTCCHHHHHHHTGGGGTSEEEECCCCCCBCSCGGGHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 97565069998778788889850468999985225887236304798777135999998788888788899999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~l~~~~~~~~~~l~v~~~~~~~yl~~F~Wd~aKyp~~~~l~elv~~i~~~~~~id~dlk~k~~~Yn~~K~~l~~~~R 160 (388)
T d1u7la_ 81 ILQGLNETSTNAYRTLPINNMPVPEYLENFQWQTRKFKLDKSIKDLITLISNESSQLDADVRATYANYNSAKTNLAAAER 160 (388)
T ss_dssp HHHHTTSSCSSSCCSCCBTTBCHHHHHHTCCCCTTTSCTTSBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHEEEECCCCHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99987236110321676878138987564460444288889899999999999998889999999999999999998740
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 K~~G~L~~r~L~diV~~ed~V~dSEyLtTllVvVPk~~~~dwl~~YEtL~~~VVPrSs~~i~~D~e~~L~~VtlFkk~~~ 240 (388)
T d1u7la_ 161 KKTGDLSVRSLHDIVKPEDFVLNSEHLTTVLVAVPKSLKSDFEKSYETLSKNVVPASASVIAEDAEYVLFNVHLFKKNVQ 240 (388)
T ss_dssp HTCSCTTTSCCTTTCCGGGSCCSCSSEEEEEEEEEGGGHHHHHHHGGGSSTTBCTTCCEEEEECSSEEEEEEEEEGGGHH
T ss_pred CCCCCEEECCHHHHCCHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHCEECCCEEEEEEEEEHHHHH
T ss_conf 04785262427752798872553314058999961531788999986325762687155302568805899999723199
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 eF~~~aRE~kf~vRdF~y~ee~~~~~~~e~~~l~~~~~~~~~~L~r~~~~~fse~f~~wiHiKalRvFVESVLRYGLP~~ 320 (388)
T d1u7la_ 241 EFTTAAREKKFIPREFNYSEELIDQLKKEHDSAASLEQSLRVQLVRLAKTAYVDVFINWFHIKALRVYVESVLRYGLPPH 320 (388)
T ss_dssp HHHHHHHHTTCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCC
T ss_pred HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999997594304266797899999999999999999999999999999999999999998568766433453589834
Q ss_pred -------------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------------a 518 (897)
.
T Consensus 321 F~~~li~p~~k~~kklr~~L~~~f~~L~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ey~PyV~~~i~l 388 (388)
T d1u7la_ 321 FNIKIIAVPPKNLSKCKSELIDAFGFLGGNAFMKDKKGKINKQDTSLHQYASLVDTEYEPFVMYIINL 388 (388)
T ss_dssp EEEEEEEECTTCHHHHHHHHHHHHGGGGCTTCC------------------------CCSSEEEEEEC
T ss_pred CEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
T ss_conf 13899950872589999999998634265300234446667776543212335677515549998349
|
| >d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Alanine-glyoxylate aminotransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=29264.28 Aligned_cols=1 Identities=0% Similarity=-0.161 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~l~~pGP~~~~~~Vl~am~~~~i~HRs~~f~~i~~ea~~~l~~llg~~~~~~ii~~gsgT 80 (388)
T d1h0ca_ 1 HKLLVTPPKALLKPLSIPNQLLLGPGPSNLPPRIMAAGGLQMIGSMSKDMYQIMDEIKEGIQYVFQTRNPLTLVISGSGH 80 (388)
T ss_dssp CCCSSCCCGGGGSCCCCCCCEECSSSCCCCCHHHHHHHTCCCCCTTSHHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHH
T ss_pred CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHH
T ss_conf 98767997676555688767212499988999999975768888789899999999999999996899983899869489
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~a~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~n~tG~i 160 (388)
T d1h0ca_ 81 CALEAALVNVLEPGDSFLVGANGIWGQRAVDIGERIGARVHPMTKDPGGHYTLQEVEEGLAQHKPVLLFLTHGESSTGVL 160 (388)
T ss_dssp HHHHHHHHHHCCSSCCEEECBSSHHHHHHHHHHHHHC--CBCCBCCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEE
T ss_pred HHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCC
T ss_conf 99999999861268740231134301000012211111133333587655216899987616971137874200014445
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~pi~~i~~~~~~~g~~~~vD~~qs~g~~~~d~~~~~~D~~~~s~~K~~~gp~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (388)
T d1h0ca_ 161 QPLDGFGELCHRYKCLLLVDSVASLGGTPLYMDRQGIDILYSGSQKALNAPPGTSLISFSDKAKKKMYSRKTKPFSFYLD 240 (388)
T ss_dssp CCCTTHHHHHHTTTCEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCTTCEEEEECHHHHHHHTTCSSCCSCSTTC
T ss_pred CCHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCCCC
T ss_conf 67999988764025441001112344332112345651220333321468972677750078887544304666432212
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~al~~~~~~g~~~~~~~~~~l~~~l~~~~~~~g~~~~~~~~~~rs~~i~~ 320 (388)
T d1h0ca_ 241 IKWLANFWGCDDQPRMYHHTIPVISLYSLRESLALIAEQGLENSWRQHREAAAYLHGRLQALGLQLFVKDPALRLPTVTT 320 (388)
T ss_dssp HHHHHHHTTCSSSCCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGGBCTTEEE
T ss_pred CCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCEEEE
T ss_conf 00023443210233443556657999988878999997166531000121047778777633753126887773880899
Q ss_pred -------------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~p~~~~~~~~~~~L~~~~gI~v~~G~~~~~~~~iRis~~g~~~t~edid~li~aL~~~L~~l~k~~ 388 (388)
T d1h0ca_ 321 VAVPAGYDWRDIVSYVIDHFDIEIMGGLGPSTGKVLRIGLLGCNATRENVDRVTEALRAALQHCPKKK 388 (388)
T ss_dssp EECCTTCCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHSCCC-
T ss_pred EECCCCCCHHHHHHHHHHCCCEEEECCCHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 98899989999999998519989957852204998998477777999999999999999999862569
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=29268.41 Aligned_cols=1 Identities=0% Similarity=-0.293 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 gll~la~~~~~~G~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~l~~~~~~~ 80 (388)
T d1w3ba_ 1 GPMELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKER 80 (388)
T ss_dssp CCCTHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 96999999998699999999999999868998999999999999869999999999999985999899999999996420
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (388)
T d1w3ba_ 81 GQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLK 160 (388)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCTHHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 00222222222121122222222222222222222222222221112222222222222222222110001356788887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 240 (388)
T d1w3ba_ 161 AIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 240 (388)
T ss_dssp HHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHH
T ss_pred HHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 40258610689986363010247199999999999984946499999971552200529999999998577755479999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 320 (388)
T d1w3ba_ 241 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGN 320 (388)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 99999999878999999999999984999899999999999974879999999986540487300101579999998789
Q ss_pred -------------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------------a 518 (897)
=
T Consensus 321 ~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~lg~~~~~~~D 388 (388)
T d1w3ba_ 321 IEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQD 388 (388)
T ss_dssp HHHHHHHHHHHTTSCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
T ss_conf 99999999999986889899999999999985999999999999997099989999999999998589
|
| >d1qxoa_ d.258.1.1 (A:) Chorismate synthase, AroC {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Chorismate synthase, AroC superfamily: Chorismate synthase, AroC family: Chorismate synthase, AroC domain: Chorismate synthase, AroC species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=0 Score=29267.93 Aligned_cols=1 Identities=0% Similarity=-1.888 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 lR~tT~GESHG~aig~vIdG~PaGl~i~~~~I~~~L~RR~pG~~~~~t~R~E~D~v~ilSGv~~G~TtG~PI~~~I~N~D 80 (388)
T d1qxoa_ 1 MRYLTAGESHGPRLTAIIEGIPAGLPLTAEDINEDLRRRQGGYGRGGRMKIENDQVVFTSGVRHGKTTGAPITMDVINKD 80 (388)
T ss_dssp CEEEEECCTTSSEEEEEEECCCBTCBCCHHHHHHHHHHHHCSTTCCTHHHHCCCCCEEEESEETTEECSSCEEEEEECGG
T ss_pred CCEEECCCCCCCEEEEEEECCCCCCEECHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEECCCCEEEEEECCC
T ss_conf 95541313688834899816186887499999999955798999997668999827994644389806774499998787
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~PRPGHAD~~~~~Kyg~~d~r~gggRsSaReTa~rVAaGaiAk~~L~~~gI~v~s~ 160 (388)
T d1qxoa_ 81 HQKWLDIMSAEDIEDRLKSKRKITHPRPGHADLVGGIKYRFDDLRNSLERSSARETTMRVAVGAVAKRLLAELDMEIANH 160 (388)
T ss_dssp GGGGTTTTCSSCCCGGGTTTTCCCSCCTTSSHHHHHHHHTCSSTHHHHHHHSGGGHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
T ss_conf 77754444411123455432012457888435789987478656687751688999999999999999999819735235
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 v~~IG~i~~~~~~~~~~~~~~~~~~~~~~~c~d~~~~~~m~~~I~~ar~~gDSlGG~ve~~~~gvP~GLG~pv~~d~kLd 240 (388)
T d1qxoa_ 161 VVVFGGKEIDVPENLTVAEIKQRAAQSEVSIVNQEREQEIKDYIDQIKRDGDTIGGVVETVVGGVPVGLGSYVQWDRKLD 240 (388)
T ss_dssp EEEETTEECCCCSSCCHHHHHHHHHTSTTCCSCGGGHHHHHHHHHHHHHTTCCBCEEEEEEEESCCTTCSCSSSGGGCHH
T ss_pred EEEECCEECCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC
T ss_conf 68741320267443687888764311556467868855668889999853887676399999717833368866776541
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 a~La~AlmSIpAvKgvEfG~GF~~a~~~GSe~nD~~~~~~~~~~~~~tN~~GGi~GGISnG~pI~~rva~KPtsSI~~~q 320 (388)
T d1qxoa_ 241 ARLAQAVVSINAFKGVEFGLGFEAGYRKGSQVMDEILWSKEDGYTRRTNNLGGFEGGMTNGQPIVVRGVMKPIPTLYKPL 320 (388)
T ss_dssp HHHHHHHHTSTTEEEEEETTGGGGGGSBGGGTSCCEEEETTTEEEESCCTTTTEETTEECSSCEEEEEEECCCSCCSSCE
T ss_pred HHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCC
T ss_conf 89998774243113453056488897421455650100466784113688762016777788769999957865567755
Q ss_pred -------------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~Tvd~~~~e~~~~~~gRhDpCivpRAvpV~EAm~alvLad~~L~k~g~d~l~~~~~~~~~y~~~~~~~ 388 (388)
T d1qxoa_ 321 MSVDIETHEPYKATVERSDPTALPAAGMVMEAVVATVLAQEILEKFSSDNLEELKEAVAKHRDYTKNY 388 (388)
T ss_dssp EEECTTTCCEEEECCSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHSCCSBHHHHHHHHHHHHHHHHTC
T ss_pred CCEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 53566898067246898897075532899999999999999999857775999999999999998519
|
| >d1eepa_ c.1.5.1 (A:) Inosine monophosphate dehydrogenase (IMPDH) {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Inosine monophosphate dehydrogenase (IMPDH) family: Inosine monophosphate dehydrogenase (IMPDH) domain: Inosine monophosphate dehydrogenase (IMPDH) species: Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]
Probab=100.00 E-value=0 Score=29267.17 Aligned_cols=1 Identities=0% Similarity=0.238 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~k~~~~~LtfDDVlLvP~~st~~~~~vdl~~~~t~~~~l~iPIisA~MDtVt~~~mAi~ma~~GGlgVihr~~~ie~q~~ 80 (388)
T d1eepa_ 1 NKITKEALTFDDVSLIPRKSSVLPSEVSLKTQLTKNISLNIPFLSSAMDTVTESQMAIAIAKEGGIGIIHKNMSIEAQRK 80 (388)
T ss_dssp CCSCCCCCCGGGEEECCCCCCSCGGGCCCCEESSSSCEESSSEEECCCTTTCSHHHHHHHHHHTSEEEECSSSCHHHHHH
T ss_pred CCCCCCCCCCCCEEEECCCCCCCHHHCEEEEEEECCEECCCCEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHH
T ss_conf 96333578841079827988777778354489538776699877169888788999999998798899908999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~v~~Vk~~~~~~~~~~~~d~~~~~~~~~t~~~~~~~~~a~~d~~~~~~~p~~~~d~~~~l~vgaAvg~~~~~~~ra~~L~ 160 (388)
T d1eepa_ 81 EIEKVKTYKFQKTINTNGDTNEQKPEIFTAKQHLEKSDAYKNAEHKEDFPNACKDLNNKLRVGAAVSIDIDTIERVEELV 160 (388)
T ss_dssp HHHHHHTCC--------------------------------------CCTTCCBCTTSCBCCEEEECSCTTHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHH
T ss_conf 99986230044520036763310223300554422547877188876506777655224101220589789999999877
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~aG~D~ivID~AhG~s~~~~~~i~~ik~~~~~v~vIaGNV~T~e~a~~L~~~GaD~VkVGiGpGs~CtTr~~~GvG~pq~ 240 (388)
T d1eepa_ 161 KAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKVGIGPGSICTTRIVAGVGVPQI 240 (388)
T ss_dssp HTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCHH
T ss_pred HHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHH
T ss_conf 51254543103663167799999999987899866500126799999998629775543122232345654236674238
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 sai~~~~~~~~~~~vpiIADGGi~~~Gdi~KAla~GAd~VMlG~~lAg~~Espg~~~~~~g~~~k~~~gm~S~~a~~~g~ 320 (388)
T d1eepa_ 241 TAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVMIGNLFAGTKESPSEEIIYNGKKFKSYVGMGSISAMKRGS 320 (388)
T ss_dssp HHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHHTCSEEEECHHHHTBTTSSSCEEEETTEEEEC--------------
T ss_pred HHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEECCCEEECCHHHHCCCCCCCEEEEECCCEEECCCCCCCHHHHHCCC
T ss_conf 89999999861577157853666737730136785155034053654136788418985892740155665487775445
Q ss_pred -------------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------------a 518 (897)
+
T Consensus 321 ~~~~~~~~~~~~~~~~~EG~~~~v~~~G~~~~~~~~l~gglrs~m~y~Ga~~l~e~~~~~~fv~vt~~ 388 (388)
T d1eepa_ 321 KSRYFQLENNEPKKLVPEGIEGMVPYSGKLKDILTQLKGGLMSGMGYLGAATISDLKINSKFVKISHS 388 (388)
T ss_dssp ----------------------CEECCBCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHSCCEEECCCC
T ss_pred CCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEECCC
T ss_conf 21013334664422346704987078887899999999999997421586629998539889997899
|
| >d2dcfa1 e.3.1.1 (A:5-392) 6-aminohexanoate-dimer hydrolase NylC {Flavobacterium sp. [TaxId: 239]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: 6-aminohexanoate-dimer hydrolase NylC species: Flavobacterium sp. [TaxId: 239]
Probab=100.00 E-value=0 Score=29266.30 Aligned_cols=1 Identities=0% Similarity=-1.157 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~t~~nw~~~~~~r~~f~~~~~~~pt~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~t~a 80 (388)
T d2dcfa1 1 STGQHPARYPGAAAGEPTLDSWQEPPHNRWAFAHLGEMVPSAAVSRRPVNAPGHALARLGAIAAQLPDLEQRLEQTYTDA 80 (388)
T ss_dssp CCCCCCCSSTTCCTTCSCTTTTTSTTHHHHHTTCGGGTSCCCCCCSCC----CCCEEECTTHHHHCTTHHHHHHHTTEEE
T ss_pred CCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCE
T ss_conf 99888455889523677847864886301205558774884342079888775333212444455433999987428847
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~lV~~~G~iv~E~y~~~~~~~t~~~~~SvtKs~ta~li~~lve~G~l~ldd~v~~ylPe~~~~~~~~iTi~~LL~mtsGl 160 (388)
T d2dcfa1 81 FLVLRGTEVVAEYYRAGFAPDDRHLLMAVSKSLCGTVVGALVDEGRIDPAQPVTEYVPELAGSVYDGPSVLQVLDMQISI 160 (388)
T ss_dssp EEEEETTEEEEEEECTTCCTTCCEECTTHHHHHHHHHHHHHHHTTSCCTTSBGGGTCGGGTTSTTSSCBHHHHHTTCBCC
T ss_pred EEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCC
T ss_conf 99998998999974699884320148999889999999999734854456752302454404543215677764233677
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pg~~f~Y~~~~~~lLg~iie~~tG~~~~~~~~e~i~ 240 (388)
T d2dcfa1 161 DYNEDYVDPASEVQTHDRSAGWRTRRHGDPADTYEFLTTLRGDGSTGEFQYCSANTDVLAWIVERVTGLRYVEALSTYLW 240 (388)
T ss_dssp SCCCCSSCTTSHHHHHHHHHTSSCCCTTCCSSHHHHHHTCCCCSCBSSCCCCHHHHHHHHHHHHHHHCSCHHHHHHHHTG
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHCC
T ss_conf 64234355651355666653101001246188999874067679998789806789999999987517630222333204
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~PlGm~~~~~~~~~~~g~~~~~ggl~~tarDlarfg~l~l~~G~~~g~qils~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 320 (388)
T d2dcfa1 241 AKLDADRDATITVDTTGFGFANGGVSCTARDLARVGRMMLDGGVAPGGRVVSEDWVRRVLAGGSHEAMTDKGFTNTFPDG 320 (388)
T ss_dssp GGTTCSSCCEECBCTTCCBCTTTCEEECHHHHHHHHHHHHTTTEETTEECSCHHHHHHHHHCCCTTTCCCHHHHHHCTTC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf 84212222222334567632100323132214577788874885488605649999998568972001245656678999
Q ss_pred -------------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------------a 518 (897)
.
T Consensus 321 ~Yg~~ww~~~~~~~~~~~~G~~GQ~i~vdP~~~lvIV~ls~~~~~~~~~~~~~~~~i~~~i~~~l~av 388 (388)
T d2dcfa1 321 SYTRQWWCTGNERGNVSGIGIHGQNLWLDPLTDSVIVKLSSWPDPDTEHWHRLQNGILLDVSRALDAV 388 (388)
T ss_dssp EEETTEEECCCTTCCEEEEETTTEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHHHHHTSCC
T ss_pred CCCCCEEECCCCCCCEEEECCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 97864551699997089887789689999069989999599999985468999999999999997229
|
| >d2ch1a1 c.67.1.3 (A:2-389) 3-hydroxykynurenine transaminase {Malaria mosquito (Anopheles gambiae) [TaxId: 7165]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: 3-hydroxykynurenine transaminase species: Malaria mosquito (Anopheles gambiae) [TaxId: 7165]
Probab=100.00 E-value=0 Score=29266.20 Aligned_cols=1 Identities=0% Similarity=-0.826 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~l~~PGP~~~~~~V~~Am~~~~~~hr~~ef~~i~~~~r~~L~~ll~~~~~~~i~~~gsgT~a 80 (388)
T d2ch1a1 1 KFTPPPASLRNPLIIPEKIMMGPGPSNCSKRVLTAMTNTVLSNFHAELFRTMDEVKDGLRYIFQTENRATMCVSGSAHAG 80 (388)
T ss_dssp CCCCCCGGGSSCCCCCCCBCCSSSSCCCCHHHHHHTTSCCCCTTCHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHH
T ss_pred CCCCCCHHHCCCCCCCCCEEEECCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHH
T ss_conf 98999634437668885540108998889999997476778878899999999999999999689997199976848999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~ea~~~~l~~~~~~vl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~t~tG~~~~ 160 (388)
T d2ch1a1 81 MEAMLSNLLEEGDRVLIAVNGIWAERAVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQP 160 (388)
T ss_dssp HHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCC
T ss_conf 99999974211133333222310000033443311332123565445521012344430478633565302222322211
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~i~~~~~~~~~~~~vD~~ss~g~~pid~~~~~~d~~~~s~~K~~~gp~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (388)
T d2ch1a1 161 LEGVGQICHQHDCLLIVDAVASLCGVPFYMDKWEIDAVYTGAQKVLGAPPGITPISISPKALDVIRNRRTKSKVFYWDLL 240 (388)
T ss_dssp CTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCCEEECCCC-CCCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHH
T ss_pred HHHHCCHHCCCCCEEEEEEEECCCCCCCCHHCCCCEEEEECCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCH
T ss_conf 12200000146540366532102346621230576399982655457887289972427788754202575531025603
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~t~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rs~~v~~~~ 320 (388)
T d2ch1a1 241 LLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKMGLDIFVKDPRHRLPTVTGIM 320 (388)
T ss_dssp HHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGGBCTTEEEEE
T ss_pred HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCEEEEEE
T ss_conf 55543023320025576532778999999999998766677898887777877766553022323689788098489998
Q ss_pred -------------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~p~g~~~~~l~~~l~~~~gI~v~~G~~~~~~~~~RIs~~g~~~t~edI~~ll~alke~L~~~~~~~~~ 388 (388)
T d2ch1a1 321 IPKGVDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKATHPDYIF 388 (388)
T ss_dssp CCTTCCHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCTTCCC
T ss_pred CCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999999998513998996788655698899717717899999999999999999961986589
|
| >d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aromatic aminoacid aminotransferase, AroAT species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=100.00 E-value=0 Score=29262.91 Aligned_cols=1 Identities=0% Similarity=-1.290 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~s~~~~~~~~s~ir~~~~~~~~~~dvi~l~~g~p~~~~p~~v~~~~~~a~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~ 80 (388)
T d1gdea_ 1 ALSDRLELVSASEIRKLFDIAAGMKDVISLGIGEPDFDTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNG 80 (388)
T ss_dssp CHHHHHHHSCCCHHHHHHHHHHHCTTCEECCCCSCCSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 95156410894689999999858998199999889998789999999999855764789985779999999999875133
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~i~~t~G~~~~l~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~ 160 (388)
T d1gdea_ 81 IEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTDKT 160 (388)
T ss_dssp CCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCCTTE
T ss_pred CCCCCHHEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCC
T ss_conf 56787020431367535889999986589798998899848899999985998999514556687879999997375687
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~i~~~~P~NPtG~~~s~~~~~~l~~~a~~~~~~vi~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR 240 (388)
T d1gdea_ 161 RALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWR 240 (388)
T ss_dssp EEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGC
T ss_pred EEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHCCCCCCCHHHCCCCCCEEEEEECCHHHCCCCCCC
T ss_conf 59998999698888689999999999999869999997088655333677777656057788089995772433376361
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~G~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~gg~fl 320 (388)
T d1gdea_ 241 LGFVAAPSWIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGLPTVKPKGAFYI 320 (388)
T ss_dssp CEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBTTEE
T ss_pred EEEEEEECCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
T ss_conf 78997302102343211232223333220045789986032036899999999875334566653212566589833799
Q ss_pred -------------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------------a 518 (897)
.
T Consensus 321 ~~~l~~~~~~~~~~~~~ll~e~gV~v~PG~~F~~~~~~~iRis~~~~~e~l~~al~rL~~~l~e~k~~ 388 (388)
T d1gdea_ 321 FPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAYEKLEEAMDRMERVLKERKLV 388 (388)
T ss_dssp CCBCGGGTCCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHHHHHHHHHHTTCC
T ss_pred EEECCCCCCCHHHHHHHHHHHCCEEEEECHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99888879999999999998599999810451989999799996499999999999999999961799
|
| >d1q8ia1 c.55.3.5 (A:2-389) Exonuclease domain of family B DNA polymerases {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Ribonuclease H-like family: DnaQ-like 3'-5' exonuclease domain: Exonuclease domain of family B DNA polymerases species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29261.75 Aligned_cols=1 Identities=0% Similarity=-0.726 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~g~~ltr~~~d~~~g~~i~~~~~t~~G~~~v~v~~q~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~~V~~v 80 (388)
T d1q8ia1 1 AQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQGFRLTPLALKDFHRQPVYGL 80 (388)
T ss_dssp CEEEEEEEEEEECCTTCBEEEEEEEETTEEEEEECSCBCEEEEEEGGGHHHHHHHTTTCCSEEEEEEEEECTTSCEEEEE
T ss_pred CCCCEEEEEEEEEECCCEEEEEEEECCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHCCCCEECCEEEECCCCCEEEEE
T ss_conf 98623630024771897799999985998879998799679999854567999998547781664322055789779999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 y~~~~~~~r~l~~~l~~~g~~vyEaDI~~~~RfliD~~i~~~~w~~~~~~~~~~~~~~~~~~~~~~P~lkilsfDIE~~~ 160 (388)
T d1q8ia1 81 YCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTR 160 (388)
T ss_dssp EESCHHHHHHHHHHHHHTTCCCBSTTCCHHHHHHHHTTCSSEEEEEEEEETTEEEEEEEEECTTCCCCCCEEEEEEEECT
T ss_pred EECCHHHHHHHHHHHHHCCCEEEECCCCHHHEEEEECCCCCCEEEEEECCCCEEECCEEEECCCCCCCCEEEEEEEEECC
T ss_conf 92899999999998862698589768996884899787888858998624661541067566788997359999999747
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~si~l~~~~~~~v~~~~~~~~~~~~~~~~v~~~~~E~~LL~~F~~~i~~~dPDii~GyNi~~FDlpyL~~Ra~~~~ 240 (388)
T d1q8ia1 161 HGELYCIGLEGCGQRIVYMLGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYR 240 (388)
T ss_dssp TSCEEEEEEEETTEEEEEEESSCCSCCTTCSSEEEEESSHHHHHHHHHHHHHHHCCSEEEESSTTTTHHHHHHHHHHHTT
T ss_pred CCCEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHC
T ss_conf 88667898548998889999567777787855999969999999999999987199889960788878899999999858
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 i~~~lgr~~~~~~~~~~~~~~~~~~~~i~Gr~~lD~~~~~k~~~~~~~sy~L~~Va~~~Lg~~K~~~~~~~~~~~~~~~~ 320 (388)
T d1q8ia1 241 LPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEIDRRF 320 (388)
T ss_dssp CCCCCSSSSCCCEEEEECSSSCEEEEEBTTBEEEEHHHHHHHSCCCCSCCCHHHHHHTTC------------CTHHHHHH
T ss_pred CCCHHHHCCCCCEEEECCCCCCCEEEECCEEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCC
T ss_conf 87404424772205875655651133020499860268897563043546776755410024455557255589987157
Q ss_pred -------------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------------a 518 (897)
=
T Consensus 321 ~~d~~~l~~Y~~~D~~Lv~~L~~k~~~i~~~~ela~l~g~pl~~~g~s~~~~~~lll~~~~r~g~v~P 388 (388)
T d1q8ia1 321 AEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAP 388 (388)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCSCTTTTCCHHHHHHHHHHHHHHHTTBCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHCCEECC
T ss_conf 12489999998999999999999877899999999884979899788499999999999997799587
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=29261.11 Aligned_cols=1 Identities=0% Similarity=-1.291 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~p~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~H~~~V~~l~fs~dg~~lasg 80 (388)
T d1erja_ 1 HYLVPYNQRANHSKPIPPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATG 80 (388)
T ss_dssp CCCCCTTSSSCTTCCCCHHHHCCCSSSSCTTSEEECSSCEEEECTTSCCCEEEEEEEEEECSSCCCEEEECTTSSEEEEE
T ss_pred CCCCCHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCCEEEEEECCCCCEEEEE
T ss_conf 95687113244147999705765843475322468897089868877762054107607999968999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~~~~~~ 160 (388)
T d1erja_ 81 CNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQ 160 (388)
T ss_dssp CBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred ECCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 49948999813640576631665443244321110146778988999988999801213444111121111111111111
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~ 240 (388)
T d1erja_ 161 GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLV 240 (388)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCC
T ss_conf 11111111011111111112221015654101111110000124544211236887875899738981999634557300
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 320 (388)
T d1erja_ 241 ERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQND 320 (388)
T ss_dssp EEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGG
T ss_pred EEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCC
T ss_conf 01024433345778987899997999999999789928987515776432101344420011012455327899988999
Q ss_pred -------------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~~k~ 388 (388)
T d1erja_ 321 EYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 388 (388)
T ss_dssp CEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred CEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCEEEEEECCCEEEEEEEEEC
T ss_conf 99999969897999999999699999688997899998467425899999999918997999762149
|
| >d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aspartate aminotransferase, AAT species: Phormidium lapideum [TaxId: 32060]
Probab=100.00 E-value=0 Score=29260.85 Aligned_cols=1 Identities=0% Similarity=-2.021 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 m~~~~~~~~~~~s~~~~i~~~a~~~~~~g~~vi~l~~G~p~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lR~aia~~~ 80 (388)
T d1j32a_ 1 MKLAARVESVSPSMTLIIDAKAKAMKAEGIDVCSFSAGEPDFNTPKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKL 80 (388)
T ss_dssp CCCCHHHHTSCCCSSTTTHHHHHHHHTTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHH
T ss_pred CCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 94523745399589999999999998779986899997899999899999999998558877899988999999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~~~~~v~~~~~~~~~~~~d~~~l~~~~ 160 (388)
T d1j32a_ 81 QRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAI 160 (388)
T ss_dssp HHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHC
T ss_pred HHHCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHC
T ss_conf 87316577885599868789999999999819989899928981879999998568599983153336678999999727
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~P~NPTG~~~~~~~~~~l~~~~~~~~~~iI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~ 240 (388)
T d1j32a_ 161 TPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYA 240 (388)
T ss_dssp CTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTT
T ss_pred CCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECHHHHHCCCCCCCCCCCHHHHCCCCCCCEEEECCCHHHHH
T ss_conf 77874999889999877403535554432011237867972056531034677887888948522156057037705413
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~GlRvG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~p~g 320 (388)
T d1j32a_ 241 MTGWRVGFLAGPVPLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGLECPKPDG 320 (388)
T ss_dssp CTTTCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCCCB
T ss_pred CCHHHEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCC
T ss_conf 60657599998899999998766521245668999887632445099999999999999999999998479978668993
Q ss_pred -------------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------------a 518 (897)
.
T Consensus 321 g~~l~~~l~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~Rls~~~~~e~l~~al~rl~~~l~~l~ 388 (388)
T d1j32a_ 321 AFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYATDLDTIKRGMERLEKFLHGIL 388 (388)
T ss_dssp TTEECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECCSCHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEECCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHC
T ss_conf 68999988887999999999999869999981643599996999983899999999999999999859
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=0 Score=29258.86 Aligned_cols=1 Identities=0% Similarity=-0.726 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~yPIVLvHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~~~G~~V~~~~V~p~~S~~~RA~eL~~~I~~~~~d~G~~ 80 (388)
T d1ku0a_ 1 ASPRANDAPIVLLHGFTGWGREEMLGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLSSNWDRACEAYAQLVGGTVDYGAA 80 (388)
T ss_dssp CCCCCCCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEECCCCSSBCHHHHHHHHHHHHHCEEEECCHH
T ss_pred CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98877999889818866677544676214678536468999858978998516986678999999999986345453376
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 hs~~~~~~~~~r~y~g~~~~~~~~~kVnLIgHS~GGld~Ryl~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~V~SvTT 160 (388)
T d1ku0a_ 81 HAAKHGHARFGRTYPGLLPELKRGGRVHIIAHSQGGQTARMLVSLLENGSQEEREYAKEHNVSLSPLFEGGHRFVLSVTT 160 (388)
T ss_dssp HHHHHTSCSEEEEECCSCGGGGGTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEEEEEE
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 77652302237567220003366786358604554587999999702356432222212344333223567750688885
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 IsTPH~GS~~AD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~~es~~~~~~~~~~s~~~~~~~~a 240 (388)
T d1ku0a_ 161 IATPHDGTTLVNMVDFTDRFFDLQKAVLEAAAVASNAPYTSEIYDFKLDQWGLRREPGESFDHYFERLKRSPVWTSTDTA 240 (388)
T ss_dssp ESCCTTCCGGGGSTTHHHHHHHHHHHHHHHHHHHTTSCGGGCCCCCCBGGGTBCCCTTCCHHHHHHHHHTSHHHHSSSBH
T ss_pred CCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHH
T ss_conf 05788986366542346652147889998876403542110002466653343457651099999988538876666401
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~dLtt~g~~~fN~~~~~~p~v~Y~S~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~NDGlV 320 (388)
T d1ku0a_ 241 RYDLSVPGAETLNRWVKASPNTYYLSFSTERTYRGALTGNYYPELGMNAFSAIVCAPFLGSYRNAALGIDSHWLGNDGIV 320 (388)
T ss_dssp HHHHSHHHHHHHHHHCCCCTTSEEEEEEECCEEECTTTCCEEECTTSCHHHHHHTHHHHTTCCBGGGTBCGGGCCBSSSS
T ss_pred HHHCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 03106599999733357899846777785143345777632224444454334557545553346532137679988865
Q ss_pred -------------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~v~S~~~g~~~~~~~~~~~~~~i~~G~W~~~~~~~~DHld~iG~~~~~~~~~~~~Y~~~a~~L~~l~~ 388 (388)
T d1ku0a_ 321 NTISMNGPKRGSNDRIVPYDGTLKKGVWNDMGTYNVDHLEVIGVDPNPSFNIRAFYLRLAEQLASLRP 388 (388)
T ss_dssp BGGGSSSCCTTCCCCEEECCSSCCBTSEEEEEEESCCTTGGGTSSCCTTSCHHHHHHHHHHHHHTCCC
T ss_pred CHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf 88557587056777543345654455011036547649997388987877999999999999843999
|
| >d2py5a2 e.8.1.1 (A:188-575) phi29 DNA polymerase {Bacteriophage phi-29 [TaxId: 10756]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: DNA/RNA polymerases superfamily: DNA/RNA polymerases family: DNA polymerase I domain: phi29 DNA polymerase species: Bacteriophage phi-29 [TaxId: 10756]
Probab=100.00 E-value=0 Score=29263.58 Aligned_cols=1 Identities=0% Similarity=-0.924 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~t~~s~~~~~fk~~~~~~~~~~~~p~~~~~~~~~ir~~y~GG~~~~~~~~~~~~~~~i~~yD~nSLYPs~M~~~~~p~g~ 80 (388)
T d2py5a2 1 MTAGSDSLKGFKDIITTKKFKKVFPTLSLGLDKEVRYAYRGGFTWLNDRFKEKEIGEGMVFDVNSLYPAQMYSRLLPYGE 80 (388)
T ss_dssp SSHHHHHHHHHHHHHCHHHHHHHSCCCCHHHHHHHHTTCCCCCEEECGGGBTCEECSEEEEEETTHHHHHHHHSCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCC
T ss_conf 96307899999999765146540888991477888971217623214544555668548986557239998337899776
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (388)
T d2py5a2 81 PIVFEGKYVWDEDYPLHIQHIRCEFELKEGYIPTIQIKRSRFYKGNEYLKSSGGEIADLWLSNVDLELMKEHYDLYNVEY 160 (388)
T ss_dssp EEEEESSCCCCTTSCEEEEEEEEEEEECTTCCCCCCC-------CCSCCSBCTTSCEEEEEEHHHHHHHHHHEEEEEEEE
T ss_pred CEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECHHHHHHHHHCCCCEEEEE
T ss_conf 04653614666666770489999822765557766530344677865784668850567873899999995587258888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~f~~~~~~~k~~~~~~~~~kk~~~~~~q~~~KLl~NSlYGk~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (388)
T d2py5a2 161 ISGLKFKATTGLFKDFIDKWTYIKTTSEGAIKQLAKLMLNSLYGKFASNPDVTGKVPYLKENGALGFRLGEEETKDPVYT 240 (388)
T ss_dssp EEEEEEEEESCTTHHHHHHHHHHHHHCCHHHHHHHHHHHHSSHHHHTCCSBCCBEEEEECTTSSEEEEECCCCBCCCCCH
T ss_pred EEEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHEECCCCCCCCCEEECCCCCEEHHHHHCCCCCCCCCH
T ss_conf 76677212357899999842588774017799999974542441013335655434641443200121210001464431
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~ia~~ita~~r~~~~~~~~~~~~~v~Y~DTDSi~~~~~~~~~~~~~~~~~~~lg~~~~E~~~~~~~~~~~K~Y~~~~~~~ 320 (388)
T d2py5a2 241 PMGVFITAWARYTTITAAQACYDRIIYCDTDSIHLTGTEIPDVIKDIVDPKKLGYWAHESTFKRAKYLRQKTYIQDIYMK 320 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTEEEEETTEEEEESSSCCGGGGGGBCSSSTTSEEEEEEEEEEEEEETTEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEECCCCCHHHHHHHHCHHHHCCCCCCCCCCHHHCCCCCHHHCEEECC
T ss_conf 48899998888889987641488379983636886577621567764245650546301010112116643201457424
Q ss_pred -------------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~v~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~~~~ 388 (388)
T d2py5a2 321 EVDGKLVEGSPDDYTDIKFSVKCAGMTDKIKKEVTFENFKVGFSRKMKPKPVQVPGGVVLVDDTFTIK 388 (388)
T ss_dssp EETTEEEECBTTBCSEEEEEEEETTCCHHHHTTCCTTTCSTTCEEEEEEEEEEETTEEEEEEEEEECC
T ss_pred CCCCCCCCCCCEEECCHHHHHHHCCCHHHHHHHHHHHHCHHHHEEECCEEEEECCCCCEECCCEEECC
T ss_conf 54332233442340152456455231699999987750502411656351177069826524402239
|
| >d1x38a1 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: NagZ-like domain: Beta-D-glucan exohydrolase, N-terminal domain species: Barley (Hordeum vulgare) [TaxId: 4513]
Probab=100.00 E-value=0 Score=29261.38 Aligned_cols=1 Identities=0% Similarity=0.039 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~y~d~~~~~e~Rv~dLl~~MTleEKigQl~~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~lq~~ 80 (388)
T d1x38a1 1 DYVLYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVPRKGATAKEWQDMVDGFQKA 80 (388)
T ss_dssp CCCGGGCTTSCHHHHHHHHHTTCCHHHHHHHTEEEEGGGCCHHHHHHTTCCEEEECTTCCSSTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 99876889999999999999877999999613064445688788985256616636876667898999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~giPlli~~D~e~G~~~~~~~t~~p~~~~~aat~d~~l~~~~g~~~g~E~ra~Gin~~~aPv~Dv~~~p~~gr~~ 160 (388)
T d1x38a1 81 CMSTRLGIPMIYGIDAVHGQNNVYGATIFPHNVGLGATRDPYLVKRIGEATALEVRATGIQYAFAPCIAVCRDPRWGRCY 160 (388)
T ss_dssp HHTSSSCCCCEEEECCSSSSTTSTTCCCCCCHHHHHHHTCHHHHHHHHHHHHHHHHHTTCCEECCCBCCCCSCTTSTTGG
T ss_pred HHHCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 87436898836633655675235664210033311025897999999998657887448763367763534564446556
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 et~geDp~l~~~~~~~v~~~~g~~~~~~~~G~~~~~~~~gV~a~~KHFpG~g~~~~~~~~~~~~i~~~~l~~~~l~pf~~ 240 (388)
T d1x38a1 161 ESYSEDRRIVQSMTELIPGLQGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVDGINENNTIINREGLMNIHMPAYKN 240 (388)
T ss_dssp GSSCSSHHHHHHGGGHHHHHHCCCCTTCCTTCCCCCSTTSCBCEEEEETTGGGCGGGCTTCEECCCHHHHHHHTSHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 67667889999988653664110135430122223455674213314436886646740334530488899886145577
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~i~~g~~~vM~s~~~~~g~pa~~s~~~l~~lLR~~~gF~G~VvSD~~~m~~~~~~~~~~~~~~~~~a~~ag~d~~~~~~~ 320 (388)
T d1x38a1 241 AMDKGVSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITTPAGSDYSYSVKASILAGLDMIMVPNK 320 (388)
T ss_dssp HHHTTCCEEEECSSEETTEEGGGCHHHHCCCCCTTSCCCSEEECCTTTTGGGSSSTTTTHHHHHHHHHHHTCCBEECCSC
T ss_pred HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCHHHCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCC
T ss_conf 77605651223422357756657999999998730599752424221023312356775789999998517881347853
Q ss_pred -------------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~l~~av~~G~i~~~rid~sv~Ril~~k~~lGlfd~p~~~~~~~~~i~~~~h~~~a~~aA~~S 388 (388)
T d1x38a1 321 YQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFENPYADPAMAEQLGKQEHRDLAREAARKS 388 (388)
T ss_dssp HHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTTTTCCSCCGGGGGGTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCC
T ss_conf 89999999999985998999999999999999999489988877824544069999999999999639
|
| >d2ex0a1 c.87.1.9 (A:26-412) Alpha-2,3/2,6-sialyltransferase/sialidase {Pasteurella multocida [TaxId: 747]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Sialyltransferase-like domain: Alpha-2,3/2,6-sialyltransferase/sialidase species: Pasteurella multocida [TaxId: 747]
Probab=100.00 E-value=0 Score=29191.38 Aligned_cols=1 Identities=0% Similarity=-0.560 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ktlEvYvD~AsLPslqqlm~iiq~ne~~~n~rli~w~R~~i~d~~l~~~~n~~F~~~~~n~~~~~~~~il~~~~~~~~in 80 (387)
T d2ex0a1 1 KTITLYLDPASLPALNQLMDFTQNNEDKTHPRIFGLSRFKIPDNIITQYQNIHFVELKDNRPTEALFTILDQYPGNIELN 80 (387)
T ss_dssp EEEEEEEESSSHHHHHHHHHHHHTTTCSSSCEEEEETTCCCCHHHHTTCSSEEECCEETTEECTHHHHHHTTCCSCEEEE
T ss_pred CCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHCCCCEEEE
T ss_conf 95699954355615999999986046778821577742368778987301021354457895299999997174433799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 i~~Nt~hS~d~~~~I~~~~~~~~~kv~i~~L~lYDDGSaEYV~l~~~k~~d~~~~~~~~~~~l~~~l~~Gt~~~~n~~~~ 160 (387)
T d2ex0a1 81 IHLNIAHSVQLIRPILAYRFKHLDRVSIQQLNLYDDGSMEYVDLEKEENKDISAEIKQAEKQLSHYLLTGKIKFDNPTIA 160 (387)
T ss_dssp EEEESTTHHHHHHHHHHHHHHTTTTEEEEEEEEECCSHHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHCCCCCSCHHHH
T ss_pred EECCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
T ss_conf 82121767776899999998740573048887752885888667764133034445678899988876387778985101
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~Y~w~qlypt~YH~Lr~Dyf~~~~~L~~Lk~yL~~n~kqM~Wd~f~~fn~~Qk~lf~~~vgf~~E~~qq~~~q~~nFiFt 240 (387)
T d2ex0a1 161 RYVWQSAFPVKYHFLSTDYFEKAEFLQPLKEYLAENYQKMDWTAYQQLTPEQQAFYLTLVGFNDEVKQSLEVQQAKFIFT 240 (387)
T ss_dssp TTCGGGTSCEEEEESCHHHHHHCGGGHHHHHHHGGGEEECCSCHHHHSCHHHHHHHHHHHTCCHHHHHHTCCSSEEEEEE
T ss_pred EEEHHHCCCCHHHHEEHHHHHCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEE
T ss_conf 33044406743431105565057452479999840333467523200698888899987179899999997267875997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 GTts~~~~~e~~eyyaqqQInvin~a~ne~s~~~~g~~ydLfFKGHP~~~~~N~~I~~~~~~mi~IpakIpFEvLmMTg~ 320 (387)
T d2ex0a1 241 GTTTWEGNTDVREYYAQQQLNLLNHFTQAEGDLFIGDHYKIYFKGHPRGGEINDYILNNAKNITNIPANISFEVLMMTGL 320 (387)
T ss_dssp CCCCCCSSCCCHHHHHHHHHHHHHHHHSTTSTTCCCTTEEEEEECCTTCTHHHHHHHHHSSSCEECCTTSCHHHHHHTTC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEECCCCCCCHHHHHHHHCCHHHHCCCCCCCHHHHHHCCC
T ss_conf 13455676306778899989998732388996530675115772699865056899743355522644586299987278
Q ss_pred ------------------------------------------------------------------E
Q ss_conf ------------------------------------------------------------------8
Q 002647 518 ------------------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------------------a 518 (897)
.
T Consensus 321 LPd~VGG~aSSlyFsiP~e~in~ivFtss~~~~s~~d~~~~~lvqVM~~L~iv~~~~V~fw~~~k~~ 387 (387)
T d2ex0a1 321 LPDKVGGVASSLYFSLPKEKISHIIFTSNKQVKSKEDALNNPYVKVMRRLGIIDESQVIFWDSLKQL 387 (387)
T ss_dssp CCSEEEEECCGGGGGSCGGGEEEEEECCCSSCSSHHHHHTSHHHHHHHHTTSCCGGGEEEGGGSCCC
T ss_pred CCHHHCCCCCEEEEECCCCCEEEEEEECCCCCCCHHHHHHCCHHHHHHHHCCCCHHHEEEHHHHHCC
T ss_conf 8054336000258975533124899933764256565653839999999777766763676753039
|
| >d1zeea1 a.266.1.2 (A:6-392) Hypothetical protein SO4414 {Shewanella oneidensis [TaxId: 70863]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Indolic compounds 2,3-dioxygenase-like superfamily: Indolic compounds 2,3-dioxygenase-like family: Indoleamine 2,3-dioxygenase-like domain: Hypothetical protein SO4414 species: Shewanella oneidensis [TaxId: 70863]
Probab=100.00 E-value=0 Score=29196.44 Aligned_cols=1 Identities=0% Similarity=-0.925 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~d~wir~~f~~~n~~le~~y~~~~~~~~~~~~g~~~k~~l~~~g~~~i~~ll~egntdegf~~~f~llgnvg~ym 80 (387)
T d1zeea1 1 YNTEAFDEWIRSRFVELNSQLEQLYYQQTDRANVQEVGTELKHTLESEGRELVKALLDEGNTDEGFDSAFDLLGNVGLYM 80 (387)
T ss_dssp CHHHHHHHHHHTHHHHHHHHHHHHHHHSSSSSCCSSSCHHHHHHHHHHHHHHHHTTTTTSSSCCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 96678889999999998799999997477732342000899999999889999999966785231799999975158999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~acrrh~i~ep~re~~~p~~eas~la~~~~as~gv~prf~~~hl~~hn~a~~~~~k~ft~l~de~~f~~~nt~~~~a~~~ 160 (387)
T d1zeea1 81 AACRRHEITEPTRETTSPLLEASALAMHIGASIGVTPRFATAHLTTHNRAHNGIYKRFTDLPDEKLFVDYNTKGILAYKR 160 (387)
T ss_dssp HHHHHTTSSCTTTCSSCSCHHHHHHHHHHHHHHTSCSSCCHHHHTTTCCEETTEECCSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99874267785301368414437999988886399923566666315665410676305883578999875799999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 a~~~l~~~~~lgi~hp~~~~ll~~~~~aLq~v~~sn~~l~~~ld~~~Ff~~vRPyykP~rVG~q~YrG~sAgqsa~I~vl 240 (387)
T d1zeea1 161 ASDALLKIQPLGISHPISHDLLRVTKQALQDVIESNQQLFNRLDTDRFFYCVRPYYKPYRVGSVVYRGANAGDFAGINVI 240 (387)
T ss_dssp HHHHHHTTTTTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHTGGGGCCEEETTEEECCCCTTCSHHHHHH
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHCCCEEECCCCHHHCCCHHHH
T ss_conf 99998764287899754899999999999999999999998439999899856312543237751079971201008999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 D~LLGvcha~dP~ysqfL~dmr~YMPP~hra~L~d~~r~PSl~d~vLsa~~~~~~~~y~~nL~aflevC~~hg~afR~hH 320 (387)
T d1zeea1 241 DLTLGLCFANEASYSQMLVDKFLYMMPEDQQILRECMRRPNLMDDFLQAKGCIHQDWYQENLKLFIEVCELHGQTAIQHH 320 (387)
T ss_dssp HHHTTSSCTTSHHHHHHHHTTGGGSCHHHHHHHHHHTTSCCHHHHHHHTGGGGGSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99975563799409999999986179789999999863871689998635650038999999999999999999999999
Q ss_pred ------------------------------------------------------------------E
Q ss_conf ------------------------------------------------------------------8
Q 002647 518 ------------------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------------------a 518 (897)
-
T Consensus 321 lQlV~KYI~~pS~~~~~q~~~~lTaSGPpl~vLLk~LkKLRD~R~AA~r~Di~tr~~d~~~l~~~l~ 387 (387)
T d1zeea1 321 NELVTKYIAEPSVSMEQQHLAKVTASGPPLHVLLASLERLRDRRAAVLRDDIRTRYYDLKKLKDSLR 387 (387)
T ss_dssp HHHTSCC------------------------CCHHHHHHHHHHHTTCCCSSSCCTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
T ss_conf 9999999972887434266566447899807899999998665542031137763999999998609
|
| >d2aepa1 b.68.1.1 (A:83-469) Influenza neuraminidase {Influenza A virus, different strains [TaxId: 11320]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Influenza neuraminidase species: Influenza A virus, different strains [TaxId: 11320]
Probab=100.00 E-value=0 Score=29196.41 Aligned_cols=1 Identities=0% Similarity=-1.357 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 e~~n~t~plC~i~gfa~~sKDN~iR~g~~g~i~V~REPyVSC~p~eCr~FaL~QGa~l~~kHsNGTi~DRsp~R~L~s~~ 80 (387)
T d2aepa1 1 EYRNWSKPQCKITGFAPFSKDNSIRLSAGGDIWVTREPYVSCDPDKCYQFALGQGTTLNNRHSNDTVHDRTPYRTLLMNE 80 (387)
T ss_dssp CCCCCCSCBCCCSEEEEEEECCHHHHHTTSCCEEEEEEEEEECSSCEEEEEEEEEEESSSGGGTTCCCSCCTTCEEEEEE
T ss_pred CCCCCCCCCCCCCCEEEEECCCCEEECCCCCEEEEECCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHEEEECC
T ss_conf 95546676675343046763662575378866998266020284401357631321027866688426654101035513
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 lG~P~~~~s~~~~vaWSsssCHDGk~wl~I~vtG~D~nA~A~i~Y~g~~tdti~SW~~nILRTQESeCvCinG~C~vvmT 160 (387)
T d2aepa1 81 LGVPFHLGTKQVCIAWSSSSCHDGKAWLHVCVTGHDENATASFIYDGRLVDSIGSWSKKILRTQESECVCINGTCTVVMT 160 (387)
T ss_dssp TTCCCCTTCEEEEECSEEEEEECSSCEEEEEEESCTTSCEEEEEETTEEEEEEECSSSSCCBCCSSCCEEETTEEEEEEE
T ss_pred CCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEECCEEEEHHHHHHHHHCCCCCCCEEEECCEEEEEEE
T ss_conf 67997558657899863243468862489987768888089999899985326544430120042204898998899992
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 DG~A~~~A~~ri~~i~eGkIik~~~l~g~~~HiEECSCYp~~~~V~CvCRDNW~GsNRP~v~in~~~~~~~~~YvCsg~~ 240 (387)
T d2aepa1 161 DGSASGRADTKILFIEEGKIVHISPLSGSAQHVEECSCYPRYPGVRCVCRDNWKGSNRPIVDINVKDYSIVSSYVCSGLV 240 (387)
T ss_dssp EECSSSCEEEEEEEEETTEEEEEEECCSSCCCCEEEEEEEETTEEEEEEECCSSCSSCEEEEECTTTCCEEEEECCCSSC
T ss_pred CCCCCCCCEEEEEEEECCEEEEEEECCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCEEEECCHHCEEEEEEEECCCC
T ss_conf 68878853068999845638877606888673276330379982699970688877897499540022045305753644
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~DTpRp~D~s~~g~C~~p~~~~G~~GVKGf~F~~Gn~vW~GRTiS~~sRsGfE~~~v~~gwt~~~Sk~~~~~q~iV~n~n 320 (387)
T d2aepa1 241 GDTPRKNDSSSSSHCLNPNNEEGGHGVKGWAFDDGNDVWMGRTISEKFRSGYETFKVIEGWSKPNSKLQINRQVIVDRGN 320 (387)
T ss_dssp CCSSCCCTTTCCCCSSSCCCSSCSSCCCCCEEEETTEEEEEECSSSSSSEEEEEEEETTTTTSTTCCCEEEEEEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCC
T ss_conf 78999888776655658888888886163368658973876532376677616999458875878634111479995588
Q ss_pred ------------------------------------------------------------------E
Q ss_conf ------------------------------------------------------------------8
Q 002647 518 ------------------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------------------a 518 (897)
.
T Consensus 321 wSGYSGsF~~~~k~C~~pCF~VElIRGrp~E~~v~WTS~S~v~fCG~~~~~~~~swpDGA~i~~mp~ 387 (387)
T d2aepa1 321 RSGYSGIFSVEGKSCINRCFYVELIRGRKQETEVWWTSNSIVVFCGTSGTYGTGSWPDGADINLMPI 387 (387)
T ss_dssp ECCCEEEEEEECSSSEEEEEEEEEEEETTTCTTSSCEEEEEEEEEEESSCCCCCCCCCCCCGGGSCC
T ss_pred CCCCEEEEEECCCCCCCEEEEEEEEECCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 7752257996899842002899996078764505785187799936789867866899766676669
|
| >d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Extended AAA-ATPase domain domain: ClpB, AAA+ modules species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=29195.78 Aligned_cols=1 Identities=100% Similarity=2.131 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~l~~~~~~l~~~a~~g~ld~~~gr~~ei~~~~~~L~r~~k~n~llvG~~GvGKtaiv~~la~~i~~~~vp~~l~~~~ 80 (387)
T d1qvra2 1 TYNALEQYGIDLTRLAAEGKLDPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKR 80 (387)
T ss_dssp CCSHHHHHEEEHHHHHHTTCSCCCCSCHHHHHHHHHHHHCSSCCCCEEEECTTSCHHHHHHHHHHHHHHTCSCTTSTTCE
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCHHHCCCE
T ss_conf 93779999798899998599998748089999999998248899976879999889999999999998089997886966
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 i~~ld~~~l~ag~~~~g~~e~r~~~i~~~~~~~~~~~ilfide~h~l~~~g~~~g~~d~a~~Lkp~L~rg~~~~I~~tT~ 160 (387)
T d1qvra2 81 IVSLQMGSLLAGAKYRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAEGAVDAGNMLKPALARGELRLIGATTL 160 (387)
T ss_dssp EEEECC-----------CHHHHHHHHHHHHHTTCSSEEEEECCC-------------------HHHHHTTCCCEEEEECH
T ss_pred EEEEEHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCH
T ss_conf 89955766652667413689999999998505899669872408888427778774138999999973788516663689
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~ey~~~e~d~al~rrF~~v~v~ep~~~~~~~il~~~~~~~e~~h~v~~~~~ai~~~v~ls~ryi~~r~~PdKAidlld~a 240 (387)
T d1qvra2 161 DEYREIEKDPALERRFQPVYVDEPTVEETISILRGLKEKYEVHHGVRISDSAIIAAATLSHRYITERRLPDKAIDLIDEA 240 (387)
T ss_dssp HHHHHHTTCTTTCSCCCCEEECCCCHHHHHHHHHHHHHHHHHHTTCEECHHHHHHHHHHHHHHCCSSCTHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99987633679998246112799867889999999999987404774669999999985023666566704688999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~a~~~i~~~s~P~el~~ler~I~qLe~E~~aL~ke~d~~s~~rl~~le~el~~lee~~~~L~~~w~~ek~~l~~i~~Lk~ 320 (387)
T d1qvra2 241 AARLRMALESAPEEIDALERKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLRAEWEREREILRKLREAQH 320 (387)
T ss_dssp HHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHSSCSSHHHHSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99998641589588999999999999999998740145788887653323567999999999999888879999999999
Q ss_pred ------------------------------------------------------------------E
Q ss_conf ------------------------------------------------------------------8
Q 002647 518 ------------------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------------------a 518 (897)
|
T Consensus 321 ~Le~lr~~le~A~r~gd~e~AaeL~y~~ip~le~el~~l~~~~~~~~lvr~~VteedIA~VVSrWTG 387 (387)
T d1qvra2 321 RLDEVRREIELAERQYDLNRAAELRYGELPKLEAEVEALSEKLRGARFVRLEVTEEDIAEIVSRWTG 387 (387)
T ss_dssp HHHHHHHHHHHHTTTTCHHHHHHHHTTHHHHHHHHHHHHHHHSSSCSSCCSEECHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 9999999999999764688788875250799999999999873579877686398999999976109
|
| >d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Bacillus licheniformis [TaxId: 1402]
Probab=100.00 E-value=0 Score=29186.06 Aligned_cols=1 Identities=0% Similarity=-2.055 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~~~~~f~~g~d~s~~~~~e~~g~~~~~~~g~~~d~~~~lk~~G~n~VRl~vw~~~~~~~~~~~~~g~~~l~~ 80 (387)
T d1ur4a_ 1 GLYVEKVSGLRKDFIKGVDVSSIIALEESGVAFYNESGKKQDIFKTLKEAGVNYVRVRIWNDPYDANGNGYGGGNNDLEK 80 (387)
T ss_dssp CCCCCCCTTCCTTCEEEEECTTHHHHHHTTCCCBCTTSCBCCHHHHHHHTTCCEEEEEECSCCBCTTCCBCSTTCCCHHH
T ss_pred CCCCCCCCCCCHHCEEEEECHHHHHHHHCCCEEECCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHH
T ss_conf 95223578998100777861068999867977889999710599999983998799404447743335767776242999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~a~~~Gl~v~ldlH~sd~wadp~~q~~p~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eigNE~~~~~ 160 (387)
T d1ur4a_ 81 AIQIGKRATANGMKLLADFHYSDFWADPAKQKAPKAWANLNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGL 160 (387)
T ss_dssp HHHHHHHHHHTTCEEEEEECSSSSCCSSSCCCCCGGGTTCCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEESSSCSSCB
T ss_pred HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
T ss_conf 99999999987997999867787776877777850321322047999999999999998863699812799724888674
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~ll~~~~~avr~~dp~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~d~ig~s~Y~~w~~~~~~~~~~l~~ 240 (387)
T d1ur4a_ 161 AGETDWAKMSQLFNAGSQAVRETDSNILVALHFTNPETSGRYAWIAETLHRHHVDYDVFASSYYPFWHGTLKNLTSVLTS 240 (387)
T ss_dssp TTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEEECCTTSTTHHHHHHHHHHHTTCCCSEEEEEECTTTSCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHH
T ss_conf 67688999999999999998730887527872267653277889999998659876400202312347608999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 l~~~~~k~v~v~E~~~~~t~~~~d~~~~~~~~~~~~~~~p~s~~gQ~~~l~~l~~~~~~~~~~G~G~~YWep~w~~~~~~ 320 (387)
T d1ur4a_ 241 VADTYGKKVMVAETSYTYTAEDGDGHGNTAPKNGQTLNNPVTVQGQANAVRDVIQAVSDVGEAGIGVFYWEPAWIPVGPA 320 (387)
T ss_dssp HHHHHCCEEEEEEECCCSCSCCSSSSCCSSSCTTSCCCSCSSHHHHHHHHHHHHHHHHTTCTTEEEEEEECTTCCCSSCG
T ss_pred HHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC
T ss_conf 99983996389985044347786444765787633356777899999999999999985478805999735763136777
Q ss_pred ------------------------------------------------------------------E
Q ss_conf ------------------------------------------------------------------8
Q 002647 518 ------------------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~w~n~aLFd~~g~~l~~l~~f~~~~~~~~~ 387 (387)
T d1ur4a_ 321 HRLEKNKALWETYGSGWATSYAAEYDPEDAGKWFGGSAVDNQALFDFKGRPLPSLHVFQYVDTGTPF 387 (387)
T ss_dssp GGHHHHHHHHHHHCCSSBCGGGTTTCTTTHHHHCBSCSCGGGCSBCTTSCBCGGGGHHHHHHHCCC-
T ss_pred CCCCCCHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC
T ss_conf 6543450345412642032213324641123456777411210335589867577877413478999
|
| >d1bxba_ c.1.15.3 (A:) D-xylose isomerase {Thermus aquaticus, subsp. Thermophilus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Xylose isomerase-like family: Xylose isomerase domain: D-xylose isomerase species: Thermus aquaticus, subsp. Thermophilus [TaxId: 271]
Probab=100.00 E-value=0 Score=29188.95 Aligned_cols=1 Identities=100% Similarity=1.633 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~p~~~~~f~~~~W~~~~~g~dpfg~~~~~~~~~~~~~~~~~~lg~~~~~fHd~d~~p~~~~~~e~~~~~~~~k~~~~~ 80 (387)
T d1bxba_ 1 MYEPKPEHRFTFGLWTVGNVGRDPFGDAVRERLDPVYVVHKLAELGAYGVNLHDEDLIPRGTPPQERDQIVRRFKKALDE 80 (387)
T ss_dssp CCCCCGGGCEEEEHHHHTCCCCBTTBCCCSCCCCHHHHHHHHHHHTCSEEEEEHHHHSCTTCCTTHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 99998766147997235787889988543112788999999984499878516665588899878999999999998641
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~Gl~~~~~t~nlf~~~~~~~Gs~t~pD~~vR~~Ai~~~k~~id~a~~LGa~~~vlW~G~dG~~~~~~~d~~~~~~~~~e~ 160 (387)
T d1bxba_ 81 TGLKVPMVTANLFSDPAFKDGAFTSPDPWVRAYALRKSLETMDLGAELGAEIYVVWPGREGAEVEATGKARKVWDWVREA 160 (387)
T ss_dssp HTCBCCEEECCCSSSGGGGGCSTTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEECCTTCEESCGGGCGGGTHHHHHHHH
T ss_pred CCCCEEEECCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 68721122454355623324764689889999999999999999998499979975787766776306799999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 l~~v~~~a~~~g~~~~i~iEpkP~EP~~~~~~~~~~~~l~~~~~~g~~~~~gl~lD~~H~~l~g~~~~~~v~~a~~~gkL 240 (387)
T d1bxba_ 161 LNFMAAYAEDQGYGYRFALEPKPNEPRGDIYFATVGSMLAFIHTLDRPERFGLNPEFAHETMAGLNFVHAVAQALDAGKL 240 (387)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCSSSSSSEESSCSHHHHHHHHTTSSSGGGEEECCBHHHHHHTTCCHHHHHHHHHHTTCB
T ss_pred HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHEEECCCCCHHHHCCCCHHHHHHHHHHHCCE
T ss_conf 99999977750788379995168988544214889999999998377020754123044530487668899999983964
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 g~vh~Nd~~~~~~D~DL~~g~~~~~~~~~~~~~L~~~gy~G~~~fD~~~~r~~~~~~l~~~~~~~m~~~a~ll~~a~~l~ 320 (387)
T d1bxba_ 241 FHIDLNDQRMSRFDQDLRFGSENLKAAFFLVDLLESSGYQGPRHFDAHALRTEDEEGVWAFARGCMRTYLILKERAEAFR 320 (387)
T ss_dssp CCEECCBCCSSSSCCCBCTTSSCHHHHHHHHHHHHHTTCCSCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 15574777777887666888621889999999998458876433134567788500689999999999999999999988
Q ss_pred ------------------------------------------------------------------E
Q ss_conf ------------------------------------------------------------------8
Q 002647 518 ------------------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------------------a 518 (897)
|
T Consensus 321 ~d~~~~~~l~ary~~~~a~~~~~~~~~~~~~~~l~~~~~~~~a~~~~s~~qE~Le~l~n~~i~g~~~ 387 (387)
T d1bxba_ 321 EDPEVKELLAAYYQEDPAALALLGPYSREKAEALKRAELPLEAKRRRGYALERLDQLAVEYLLGVRG 387 (387)
T ss_dssp TCHHHHHHHHHHTCCCHHHHTTSSSCCSHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHTTCCC
T ss_pred HCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCC
T ss_conf 6768999999987212442201100145679984476678431432672499999999999862369
|
| >d1zsqa2 c.45.1.3 (A:199-585) Myotubularin-related protein 2, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: (Phosphotyrosine protein) phosphatases II superfamily: (Phosphotyrosine protein) phosphatases II family: Myotubularin-like phosphatases domain: Myotubularin-related protein 2, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=29188.52 Aligned_cols=1 Identities=0% Similarity=-0.394 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~edGW~~yd~~~E~~RlGl~~~~WRiS~iN~~Y~lC~SYP~~lVVP~~isD~~l~~~a~fr~~~R~Pvl~w~~~~~~ 80 (387)
T d1zsqa2 1 EVFPENGWKLYDPLLEYRRQGIPNESWRITKINERYELCDTYPALLVVPANIPDEELKRVASFRSRGRIPVLSWIHPESQ 80 (387)
T ss_dssp CCCSSCGGGSCCHHHHHHHTTCSCSSEEEECTTTTSSSCTTSCSSEEEETTCCHHHHHHHHHHBGGGCCCEEEEECTTTC
T ss_pred CCCCCCCHHHCCHHHHHHHCCCCCCCEEEEEECCCCEECCCCCCCEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCC
T ss_conf 98788763235889999863899888788542699704588998169828589999999987636997607988759998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 a~L~RssqP~~g~~~~r~~ede~~l~~i~~~~~~~~~~~I~D~Rp~~na~an~~~ggG~E~~~~Y~~~~~~f~~i~nih~ 160 (387)
T d1zsqa2 81 ATITRCSQPMVGVSGKRSKEDEKYLQAIMDSNAQSHKIFIFDARPSVNAVANKAKGGGYESEDAYQNAELVFLDIHNIHV 160 (387)
T ss_dssp CEEEEECCBCCTTTTCCCHHHHHHHHHHHHHSSSCSSEEEEECSCHHHHHHHHHHTCCCCCTTTCTTEEEEECCCCCHHH
T ss_pred CEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHCCCCCCCHHCCCCCEEEEECCCCHHH
T ss_conf 36885178577756787689999999999737776753555477414688752248986552105675245304665278
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 vr~s~~kl~~~~~~~~~~~~~~s~le~s~WL~~i~~~L~~A~~ia~~l~~~~~sVlVh~sdGwD~T~qvsSL~ql~lDpy 240 (387)
T d1zsqa2 161 MRESLRKLKEIVYPNIEETHWLSNLESTHWLEHIKLILAGALRIADKVESGKTSVVVHSSDGWDRTAQLTSLAMLMLDGY 240 (387)
T ss_dssp HHHHHHHHHHHHSSCCCGGGHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECSSSSSHHHHHHHHHHHHHCGG
T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
T ss_conf 99999999998558875466775243444499999999999999999970897399857888752489999999973832
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 yRTi~GF~~LIekewi~~Gh~F~~R~~h~~~~~~~~e~sPvFl~FLDcV~ql~~q~P~~FEF~e~~L~~l~~h~~s~~fg 320 (387)
T d1zsqa2 241 YRTIRGFEVLVEKEWLSFGHRFQLRVGHGDKNHADADRSPVFLQFIDCVWQMTRQFPTAFEFNEYFLITILDHLYSCLFG 320 (387)
T ss_dssp GGSHHHHHHHHHHHTTTTTCCHHHHHTTTCCCTTCTTCCCHHHHHHHHHHHHHHHCTTTCSBCHHHHHHHHHHHHHCSSS
T ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCC
T ss_conf 11188899999988873378632342678777566777985699999999998749740112799999999986026646
Q ss_pred ------------------------------------------------------------------E
Q ss_conf ------------------------------------------------------------------8
Q 002647 518 ------------------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------------------a 518 (897)
-
T Consensus 321 tFl~n~e~eR~~~~~~~~t~Slw~~~~~~~~~f~N~~Y~~~~~~~l~P~~~~~~~~~W~~~ylR~~p 387 (387)
T d1zsqa2 321 TFLCNSEQQRGKENLPKRTVSLWSYINSQLEDFTNPLYGSYSNHVLYPVASMRHLELWVGYYIRWNP 387 (387)
T ss_dssp TTCSSSHHHHHHTTHHHHSCCHHHHHHTCGGGGBCTTTTSCSSSCCCCCCSTTTCCCCHHHHTCSCC
T ss_pred CCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCEEHHHHCCCCCC
T ss_conf 4555899999871768787369999987599855978788999857033675667426753335587
|
| >d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine aminotransferase ArgD {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Acetylornithine/acetyl-lysine aminotransferase ArgD species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=29187.57 Aligned_cols=1 Identities=0% Similarity=-0.358 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~~~~~~~y~~~p~~i~ra~G~~l~d~dG~~ylD~~~g~~~~~lGh~hp~v~~a~~~~~~~~~~~~~~~~~~~ 80 (387)
T d1vefa1 1 WRALLEAEKTLDSGVYNKHDLLIVRGQGARVWDAEGNEYIDCVGGYGVANLGHGNPEVVEAVKRQAETLMAMPQTLPTPM 80 (387)
T ss_dssp CHHHHHHHHHHBCSCSCCCSSCEEEEEBTEEEETTSCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCTTSCCHH
T ss_pred CHHHHHHHHHCCCCCCCCCCCEEEEEECCEEEECCCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCH
T ss_conf 96688606531489878898318984749999798799998464187665528969999999999976364666557705
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~la~~l~~~~~~~~~~v~f~~sGseA~e~Aik~Ar~~t~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~p~~~~~~ 160 (387)
T d1vefa1 81 RGEFYRTLTAILPPELNRVFPVNSGTEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVE 160 (387)
T ss_dssp HHHHHHHHHHTSCTTEEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEE
T ss_pred HHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCE
T ss_conf 99999876530232101111246726799999999876113312325656889996123863478655678878899826
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~p~~d~~~l~~~~~~~iAavi~EPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~~~~~~~~v~PD 240 (387)
T d1vefa1 161 FIPYNDVEALKRAVDEETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPD 240 (387)
T ss_dssp EECTTCHHHHHHHCCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCS
T ss_pred EECCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 86889799999756897479999787788888649989999999999976926984002224674677765446783776
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 i~~~gK~l~gG~~~~~~~~~~~~~~~~~~~~~g~T~~gnPla~aaa~a~L~~l~~~~~~~~v~~~g~~l~~~L~~l~~~~ 320 (387)
T d1vefa1 241 ILTLAKALGGGVPLGVAVMREEVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLERTRLWERAAELGPWFMEKLRAIPSPK 320 (387)
T ss_dssp EEEECGGGGTTSSCEEEEEEHHHHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTSCCTT
T ss_pred EEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 33313257887666332221023102236883553799863001011200010333222057665078999998617984
Q ss_pred ------------------------------------------------------------------E
Q ss_conf ------------------------------------------------------------------8
Q 002647 518 ------------------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------------------a 518 (897)
.
T Consensus 321 v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~g~l~~~~g~~~ir~~Ppl~it~~~ld~~~~~i~~aLS 387 (387)
T d1vefa1 321 IREVRGMGLMVGLELKEKAAPYIARLEKEHRVLALQAGPTVIRFLPPLVIEKEDLERVVEAVRAVLA 387 (387)
T ss_dssp EEEEEEETTEEEEEESSCSHHHHHHHHHHHCEECEESSTTEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred EEEEEECCEEEEEEEECCCHHHHHHHHHHCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHC
T ss_conf 5788521469999982774699999999789759933899899979713999999999999999859
|
| >d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: beta-secretase (memapsin) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=29184.13 Aligned_cols=1 Identities=0% Similarity=-0.925 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~l~~~~~~~Y~~~i~IGtP~Q~~~li~DTGSs~lWv~~~~c~~~~~~f~~~~SsT~~~~~~~~~i~Y~~g~~~G 80 (387)
T d2qp8a1 1 FVEMVDNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEG 80 (387)
T ss_dssp CTTTTTCEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTCSCCCCGGGCTTCEEEEEEEEEECSSCEEEE
T ss_pred CCCHHHCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCEECCCCEEEEECCCCEEE
T ss_conf 92133025589999899999988999799999989961048926898767881583028871757981899968960999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~D~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~~~~~~~~fs~~l~~~~ 160 (387)
T d2qp8a1 81 ELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVPNLFSLQLCGAG 160 (387)
T ss_dssp EEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCCSCEEEEECCCS
T ss_pred EEEEEEEEECCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCC
T ss_conf 99999999847773367478999982477621134556622334564435788778537888626574215767632455
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~G~l~~Gg~d~~~~~g~~~~~~~~~~~~~~v~~~~i~v~g~~~~~~~~~~~~~~aiiDSGts~i~lp~ 240 (387)
T d2qp8a1 161 FPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPK 240 (387)
T ss_dssp SCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEEH
T ss_pred CCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEECCCCCCEEEEEEEEEEECCEECCCCCCCCCCCCEEEECCCCEEECCH
T ss_conf 44456644457784467456233334573586314543336899879999999656654567764169816997086889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~fp~~~~~~~~~~~~~~~~~~i~p~~y~~~~~~~~~~~~~ 320 (387)
T d2qp8a1 241 KVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDD 320 (387)
T ss_dssp HHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCTTCCSCE
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEECHHHHEEECCCCCCCCCE
T ss_conf 99999999856001465567754453156410038986421340578866621233079998879911551356786766
Q ss_pred ------------------------------------------------------------------E
Q ss_conf ------------------------------------------------------------------8
Q 002647 518 ------------------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------------------a 518 (897)
-
T Consensus 321 c~~~~~~~~~~~~ILG~~Flr~~y~vfD~~~~~IGfA~a~c~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (387)
T d2qp8a1 321 CYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFRTAAVEGPFVTLDMEDCGYN 387 (387)
T ss_dssp EEEECEEEESSCEEECHHHHTTEEEEEETTTTEEEEEEETTCCCCSSCCCEEEEEEECCCGGGGSCC
T ss_pred EEEEEECCCCCCEEEHHHHHCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCC
T ss_conf 8998707999977970894286899998999999999778687788131256798888984652789
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=100.00 E-value=0 Score=29183.56 Aligned_cols=1 Identities=0% Similarity=-0.460 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~p~~g~W~~~~~~p~~~~~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~ 80 (387)
T d1k3ia3 1 YTAPQPGLGRWGPTIDLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPG 80 (387)
T ss_dssp CCCCCTTSCEEEEEEECSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCEEECCCCCCCCCCCEEE
T ss_conf 98788978716786889861017899925999999984057666788776068999988889686667789874452568
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~g~i~v~Gg~~~~~~~~yd~~~~~w~~~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W~ 160 (387)
T d1k3ia3 81 ISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWT 160 (387)
T ss_dssp EEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEE
T ss_pred EEEECCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCEEEEECCCCCCEE
T ss_conf 99946886898636888621675675574421565664210130355317826652136633354320566348889551
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (387)
T d1k3ia3 161 SLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYD 240 (387)
T ss_dssp EETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEE
T ss_pred ECCCCCCCCCCCCCCCCEEECCCEEEEEEECCCCEEEECCCCCCEEECCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 15887644311346651365042269997079877874686774781486667173166556676657632226378861
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~g~v~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~dg~i~v~GG~~~~~~~~~~~~~ 320 (387)
T d1k3ia3 241 AVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPV 320 (387)
T ss_dssp TTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBC
T ss_pred CCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCEE
T ss_conf 35882478875367887752100000111113567884060366566543433566058749998884567668899470
Q ss_pred ------------------------------------------------------------------E
Q ss_conf ------------------------------------------------------------------8
Q 002647 518 ------------------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~ve~Ydp~~~~W~~~~~~~~~R~~Hs~a~l~~dG~v~v~GG~~~~~~~~~~~~~e~y~Ppyl~~~~ 387 (387)
T d1k3ia3 321 FTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGDCTTNHFDAQIFTPNYLYNSN 387 (387)
T ss_dssp CCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECCCCTTCSCCCCEEEEEECGGGBCTT
T ss_pred CEEEEEECCCCEEEECCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEECCHHCCCCC
T ss_conf 1079897999918878899975531279999889999999698767888661148998260405898
|
| >d1v8za1 c.79.1.1 (A:1-386) Tryptophan synthase, beta-subunit {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Tryptophan synthase, beta-subunit species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=100.00 E-value=0 Score=29111.91 Aligned_cols=1 Identities=100% Similarity=1.633 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~pe~l~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~rpTPLi~~~~Ls~~lgg~~Iy~K~E~lnptGS 80 (386)
T d1v8za1 1 MWFGEFGGQYVPETLIEPLKELEKAYKRFKDDEEFNRQLNYYLKTWAGRPTPLYYAKRLTEKIGGAKIYLKREDLVHGGA 80 (386)
T ss_dssp CEETTEECCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCSCCEEECHHHHHHHTSSEEEEEEGGGSTTSB
T ss_pred CCCCCCCCEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHCCCCEEEEEECCCCCCCC
T ss_conf 97678098848788899999999999999639899999999987338999855173766876289739999666877877
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~KdR~a~~~i~~a~~~G~~~~v~~~s~Gn~g~a~A~aaa~~G~~~~i~mp~~~~~~~~~kv~~~~~~GA~Vv~v~~~~~~ 160 (386)
T d1v8za1 81 HKTNNAIGQALLAKFMGKTRLIAETGAGQHGVATAMAGALLGMKVDIYMGAEDVERQKMNVFRMKLLGANVIPVNSGSRT 160 (386)
T ss_dssp THHHHHHHHHHHHHHTTCCEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEHHHHTTCHHHHHHHHHTTCEEEEECSTTSS
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCH
T ss_conf 64168999999876528831675225226999999999976986430344115544179999998649827994687430
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~q~~~~~g~~pd~vv~~vGgG~~~~g~~~~~~ 240 (386)
T d1v8za1 161 LKDAINEALRDWVATFEYTHYLIGSVVGPHPYPTIVRDFQSVIGREAKAQILEAEGQLPDVIVACVGGGSNAMGIFYPFV 240 (386)
T ss_dssp HHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHHHHHHHHHHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHGGGT
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHH
T ss_conf 88889989999986056654214544574336133310013544537888998628989889977887178899998764
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~v~iigvep~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v 320 (386)
T d1v8za1 241 NDKKVKLVGVEAGGKGLESGKHSASLNAGQVGVFHGMLSYFLQDEEGQIKPTHSIAPGLDYPGVGPEHAYLKKIQRAEYV 320 (386)
T ss_dssp TCTTSEEEEEEEEETBGGGTBSCCHHHHCEEEEETTEEEEECBCTTSCBCCCCCSSTTSCCSBCCHHHHHHHHTTSEEEE
T ss_pred HCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEE
T ss_conf 23670599970576643355532000357655551021001068777603443222221245530577888754854999
Q ss_pred -----------------------------------------------------------------E
Q ss_conf -----------------------------------------------------------------8
Q 002647 518 -----------------------------------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------------------------------a 518 (897)
|
T Consensus 321 ~VtD~E~~~a~~~La~~EGI~~~~~sa~alA~a~kla~~~~~~~~VV~iltG~G~kD~~~~~~~~g 386 (386)
T d1v8za1 321 TVTDEEALKAFHELSRTEGIIPALESAHAVAYAMKLAKEMSRDEIIIVNLSGRGDKDLDIVLKVSG 386 (386)
T ss_dssp EEEHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHHHTSCTTCEEEEEECBBSGGGHHHHHHHHC
T ss_pred EECHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHCC
T ss_conf 989999999999999965993566799999999998787199897999968885212999998539
|
| >d1r6ta2 c.26.1.1 (A:82-467) Tryptophanyl-tRNA synthetase (TrpRS) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Adenine nucleotide alpha hydrolase-like superfamily: Nucleotidylyl transferase family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain domain: Tryptophanyl-tRNA synthetase (TrpRS) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=29110.59 Aligned_cols=1 Identities=0% Similarity=0.304 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~pw~v~~~~~~~~dy~kl~~~fg~~~~~~~~~~~~~~~~~~~~h~~~rRg~~f~hrd~~~il~~~~~gkp~~vytG 80 (386)
T d1r6ta2 1 EDFVDPWTVQTSSAKGIDYDKLIVRFGSSKIDKELINRIERATGQRPHHFLRRGIFFSHRDMNQVLDAYENKKPFYLYTG 80 (386)
T ss_dssp CCEESSSCEECSCTTCCCHHHHHHHHTCEECCHHHHHHHHHHHCSCCCHHHHTTSEEEEESHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHCCEEEECCCHHHHHHHHHCCCCEEEEEC
T ss_conf 98438660668876666699999984888688899999997536886154533604422679999999974998589945
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~PSg~~lHlGh~v~~~~~~~~q~~~~~~v~i~iaD~~a~~~~~~~~~e~~~~~~e~~~~~lA~GlDp~kt~i~~~s~~~ 160 (386)
T d1r6ta2 81 RGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVIQMTDDEKYLWKDLTLDQAYGDAVENAKDIIACGFDINKTFIFSDLDYM 160 (386)
T ss_dssp ECCCTTCCBGGGHHHHHHHHHHHHHHTCCEEEEECHHHHHHHSSCCHHHHHHHHHHHHHHHHTTCCCTTSEEEEEHHHHG
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHH
T ss_conf 17998402899999999999999721324489932517640456999999999999999999817895002899684799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~l~~~~~~~~~l~r~~t~~~~k~~~~~~~~~~~g~~~YP~lQaaDil~~~~d~~~~~~~~~~~lvpvG~DQ~~h~~ltR 240 (386)
T d1r6ta2 161 GMSSGFYKNVVKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDRTDIQCLIPCAIDQDPYFRMTR 240 (386)
T ss_dssp GGCTTHHHHHHHHHHTCBHHHHHHHHCCCTTSBHHHHHHHHHHHGGGSGGGCHHHHTTCCCCEEEEEEEGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 98899999999998756514888864335677676531279889999983470542255665420110262899999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 Dia~r~~~~~p~~l~~~~lpgL~G~~~KMSsS~~~s~I~l~D~~~~i~~KI~~~~~~~~~~~~~e~~~~~g~~~~~v~~~ 320 (386)
T d1r6ta2 241 DVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTDTAKQIKTKVNKHAFSGGRDTIEEHRQFGGNCDVDVSFM 320 (386)
T ss_dssp HHGGGGTCCCCEEEEECCCEETTEEEEECCTTSTTCCCBTTCCHHHHHHHHHHHSCCCSCSSHHHHHHHCCCTTTCHHHH
T ss_pred HHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 99998278886221144556778743445567777434635988899997661143168765446000389841317999
Q ss_pred -----------------------------------------------------------------E
Q ss_conf -----------------------------------------------------------------8
Q 002647 518 -----------------------------------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------------------------------a 518 (897)
+
T Consensus 321 ~l~~f~~d~~~~eel~~~y~~G~l~~gd~K~~lae~l~~~l~~~rekr~~~~~~~v~~~l~~~kl~ 386 (386)
T d1r6ta2 321 YLTFFLEDDDKLEQIRKDYTSGAMLTGELKKALIEVLQPLIAEHQARRKEVTDEIVKEFMTPRKLA 386 (386)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTSCCCCC
T ss_pred HHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 999986987589999999976999989999999999999978999999998888999985546799
|
| >d1muwa_ c.1.15.3 (A:) D-xylose isomerase {Streptomyces olivochromogenes [TaxId: 1963]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Xylose isomerase-like family: Xylose isomerase domain: D-xylose isomerase species: Streptomyces olivochromogenes [TaxId: 1963]
Probab=100.00 E-value=0 Score=29106.93 Aligned_cols=1 Identities=0% Similarity=-0.393 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~p~~~~rF~~~~Wt~~~~g~dpFG~~tr~~~~~~d~~~~~~~lG~~~~~fHd~D~~P~~~~~~e~~~~~~~i~~~l~~ 80 (386)
T d1muwa_ 1 SYQPTPEDRFTFGLWTVGWQGRDPFGDATRPALDPVETVQRLAELGAHGVTFHDDDLIPFGSSDTERESHIKRFRQALDA 80 (386)
T ss_dssp CCCCCGGGCEEEEHHHHTCCCCBTTBCCSSCCCCHHHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99898445335886205765879999888999898999999998599879747775688899867889999999999985
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~Gl~~~~~t~nlf~~p~~~~Ga~tspD~~vR~~Ai~~~k~aiDia~~LGa~~vv~W~G~~G~~~~~~~d~~~~~~~l~e~ 160 (386)
T d1muwa_ 81 TGMTVPMATTNLFTHPVFKDGGFTANDRDVRRYALRKTIRNIDLAVELGAKTYVAWGGREGAESGAAKDVRVALDRMKEA 160 (386)
T ss_dssp HTCBCCEEECCCSSSGGGTTCSTTCSSHHHHHHHHHHHHHHHHHHHHHTCSEEEECCTTCEESSTTSCCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCEECCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 29701134156410200113787792999999999999999999998399848984787755677667999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 l~~v~dya~~~g~~v~~~IEpkP~EP~~~~~~~t~~~al~~l~~~g~~~~~glnlD~gHa~~ag~~~~~~ia~a~~~grL 240 (386)
T d1muwa_ 161 FDLLGEYVTSQGYDIRFAIEPKPNEPRGDILLPTVGHALAFIERLERPELYGVNPEVGHEQMAGLNFPHGIAQALWAGKL 240 (386)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCSSSSSSEESSCSHHHHHHHHTTSSSGGGEEECCBHHHHHTTTCCHHHHHHHHHHTTCB
T ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCCCCEECCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCE
T ss_conf 99999999972999369982057887553310769999999997299531346644465330477715899999873867
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~vhlNd~~~~~~D~DL~fG~~~~~~~~~~~~~L~~~Gy~G~~~FD~k~~R~~~~~~~~~~~~~~m~~~a~~~~~a~~~~ 320 (386)
T d1muwa_ 241 FHIDLNGQSGIKYDQDLRFGAGDLRAAFWLVDLLESAGYEGPRHFDFKPPRTEDIDGVWASAAGCMRNYLILKERAAAFR 320 (386)
T ss_dssp CCCEECBCCSSSSCCCBCTTSSSHHHHHHHHHHHHHHTCCSCEEECCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 34211533477743456676401789999999999559988330540367788766799999999999999999999865
Q ss_pred -----------------------------------------------------------------E
Q ss_conf -----------------------------------------------------------------8
Q 002647 518 -----------------------------------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~d~~~~~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~e~Le~l~~~~l~g~r 386 (386)
T d1muwa_ 321 ADPEVQEALRASRLDELAQPTAADGVQELLADRTAFEDFDVDAAAARGMAFERLDQLAMDHLLGAR 386 (386)
T ss_dssp HCHHHHHHHHHTTHHHHTSCSCTTCHHHHHHCGGGTTTCCHHHHHHSCCCHHHHHHHHHHHHHTCC
T ss_pred HCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHCCC
T ss_conf 499999999986554113544445256677776520013813343255029999999999971379
|
| >d3c10a1 c.42.1.2 (A:515-900) Histone deacetylase 7, HDAC7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Arginase/deacetylase superfamily: Arginase/deacetylase family: Histone deacetylase, HDAC domain: Histone deacetylase 7, HDAC7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=29106.45 Aligned_cols=1 Identities=0% Similarity=-0.393 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~Tg~vyd~~~l~H~~~~g~~~~HPE~p~Rl~~i~~~L~~~gl~~~~~~~~p~~a~~~~L~~vH~~~YI~~l~~~~~ 80 (386)
T d3c10a1 1 TLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHVLLYGTNPL 80 (386)
T ss_dssp CCTTCEEEECCGGGGGCCCTTCCGGGCSSCTHHHHHHHHHHHHTTCGGGSEEECCCCCCHHHHTTTSCHHHHHHHHCCTT
T ss_pred CCCCCEEEEECHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHCCHHHHHHHHHCHH
T ss_conf 99887799977788557899999899897989999999999966996578376789899999988299999999862605
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~dt~~~~~~s~~Aa~~aaG~~~~a~~~v~~~~~~~afa~~rppGHHA~~~ 160 (386)
T d3c10a1 81 SRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHS 160 (386)
T ss_dssp CSCCCCHHHHHHHHHC---CBCTTSCEESSSSCEECTTTHHHHHHHHHHHHHHHHHHHHTTSSSEEEECCSSCCTTCBTT
T ss_pred HHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf 43112233321034555420367777666888645761089999998457888776542376544441244323545655
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~GFC~fNdvAiaa~~l~~~~~~~rV~iiD~DvHhGnGTq~if~~~~~V~~~SiH~~~~~~~~p~tG~~~e~G~g~g~g 240 (386)
T d3c10a1 161 TAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEG 240 (386)
T ss_dssp BCBTTBSSCHHHHHHHHHHHHSTTCCEEEEECSSSCCHHHHHHHTTCTTEEEEEEEECTTTTSTTCCCCTTCCCCGGGTT
T ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC
T ss_conf 66873433288999999986214677437742467887604676425543354333566545678889887638877766
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~n~pl~~~l~~~~~d~~yl~~~~~~l~~~~~~f~PdlIvvsaG~D~~~~D~~pLg~l~lt~~~~~~~~~~l~~~~~~~ 320 (386)
T d3c10a1 241 FNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAGGA 320 (386)
T ss_dssp CEEEEEECSCSSSCCBHHHHHHHHHHTHHHHHHHHCCSEEEEEECCTTBTTCCGGGCCCBBCHHHHHHHHHHHTTSGGGC
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 64456410136799983999999999999999866998899968825334675356367558999999999999873998
Q ss_pred -----------------------------------------------------------------E
Q ss_conf -----------------------------------------------------------------8
Q 002647 518 -----------------------------------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------------------------------a 518 (897)
-
T Consensus 321 vv~vleGGY~~~~l~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~w~~~~~ 386 (386)
T d3c10a1 321 VVLALEGGHDLTAICDASEACVAALLGNRVDPLSEEGWKQKPNLNAIRSLEAVIRVHSKYWGCMQR 386 (386)
T ss_dssp EEEEECSCCCHHHHHHHHHHHHHHHHTCCCCGGGCSGGGSCCCHHHHHHHHHHHHHHTTTCGGGCC
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 799968888865899999999999838999987841013588888999999999999886076329
|
| >d1v5da_ a.102.1.2 (A:) Chitosanase {Bacillus sp., strain k17 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: Cellulases catalytic domain domain: Chitosanase species: Bacillus sp., strain k17 [TaxId: 1409]
Probab=100.00 E-value=0 Score=29105.38 Aligned_cols=1 Identities=0% Similarity=-0.726 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~pfp~~~~y~~~~~~~~~~q~~~~~~~~~~y~~wk~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~t~SEGqgYGM 80 (386)
T d1v5da_ 1 AKEMKPFPQQVNYAGVIKPNHVTQESLNASVRSYYDNWKKKYLKNDLSSLPGGYYVKGEITGDADGFKPLGTSEGQGYGM 80 (386)
T ss_dssp CCCSSCSCCCCCCTTCCCCCSSCHHHHHHHHHHHHHHHHHHHEECCCTTSTTCCEECCCCCCCBTTBCCCEEHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHHHHH
T ss_conf 98788898753536774888667899999999999999999853367777764001465556788898753005888999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 l~Av~~~~~~~nd~~~Fd~lw~wt~~~l~~~~~~L~aW~~~~~~~~v~d~nsAtDgDl~iA~ALl~A~~~Wg~~~~~~Y~ 160 (386)
T d1v5da_ 81 IITVLMAGYDSNAQKIYDGLFKTARTFKSSQNPNLMGWVVADSKKAQGHFDSATDGDLDIAYSLLLAHKQWGSNGTVNYL 160 (386)
T ss_dssp HHHHHTBTTBTTHHHHHHHHHHHHHHTBCSSCTTSBCSEECSSGGGTTTSCCCHHHHHHHHHHHHHHHHHHCSSSSSCHH
T ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHH
T ss_conf 99998476775619999999999999860679998668857999877799988768999999999999774885178999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~A~~ii~~i~~~~~~~~~~~l~~g~~~~~~~~~~npSY~~p~~~~~fa~~~~d~~W~~v~~~~~~ll~~~~~~~~~~tG 240 (386)
T d1v5da_ 161 KEAQDMITKGIKASNVTNNNQLNLGDWDSKSSLDTRPSDWMMSHLRAFYEFTGDKTWLTVINNLYDVYTQFSNKYSPNTG 240 (386)
T ss_dssp HHHHHHHHHTHHHHHBCTTSSBCSSTTSCTTCCCBCGGGCCHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHHHCTTTC
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999998750578887426888788898755831054999999997458972999999999999998763188768
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 L~PDw~~~~~~~~~~~~~~~~~~~~~~~~ydA~Rvpl~la~d~~w~g~~~a~~~~~~~~~f~~~~~~~~~~~i~~~y~l~ 320 (386)
T d1v5da_ 241 LISDFVVKNPPQPAPKDFLDESEYTNAYYYNASRVPLRIVMDYAMYGEKRSKVISDKVSSWIQNKTNGNPSKIVDGYQLN 320 (386)
T ss_dssp CCCSSEETTTTEECCTTGGGSCTTTTSBCTTGGGHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTTCGGGCCSCBCTT
T ss_pred CCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 99631212786767765677777888724119999999998886427804789999999999986147976556632147
Q ss_pred -----------------------------------------------------------------E
Q ss_conf -----------------------------------------------------------------8
Q 002647 518 -----------------------------------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------------------------------a 518 (897)
-
T Consensus 321 G~~~~~~~~~~~~a~~~~aa~~~~~~~~~~~~~~~~~~~~~~~YY~~~L~Ll~ll~lsGn~~~p~p 386 (386)
T d1v5da_ 321 GSNIGSYPTAVFVSPFIAASITSSNNQKWVNSGWDWMKNKRERYFSDSYNLLTMLFITGNWWKPVP 386 (386)
T ss_dssp SCBCCCSCCHHHHHHHHHTTTTCGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTTCSCCCCC
T ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 742688875899999999862873169999998733357778857999999999997388888998
|
| >d1ejxc2 c.1.9.2 (C:1130-1422,C:1476-1567) alpha-subunit of urease, catalytic domain {Klebsiella aerogenes [TaxId: 28451]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: alpha-subunit of urease, catalytic domain domain: alpha-subunit of urease, catalytic domain species: Klebsiella aerogenes [TaxId: 28451]
Probab=100.00 E-value=0 Score=29041.93 Aligned_cols=1 Identities=0% Similarity=-2.055 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 GiDtHvHfi~Pqq~~~al~sGiTT~iGgGtGPa~Gt~att~tpg~~~~~~ml~a~d~~P~N~g~~gkGn~s~~~~l~eqi 80 (385)
T d1ejxc2 1 GIDTHIHWICPQQAEEALVSGVTTMVGGGTGPAAGTHATTCTPGPWYISRMLQAADSLPVNIGLLGKGNVSQPDALREQV 80 (385)
T ss_dssp EEEEEEECSCTTHHHHHHHTTEEEEEEECCSSSHHHHHSSCCCHHHHHHHHHHHHTTSSSEEEEEEECCCSSHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH
T ss_conf 95545334488789999866973663686688877777573888899999998655078331052116669868999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~AGa~GlKiHEDwGatpa~id~~L~vad~~dvqv~iHtDtlNE~gfvedT~~a~~gRtiH~~H~EGaGGGHAPDii~~~~ 160 (385)
T d1ejxc2 81 AAGVIGLKIHEDWGATPAAIDCALTVADEMDIQVALHSDTLNESGFVEDTLAAIGGRTIHTFHTEGAGGGHAPDIITACA 160 (385)
T ss_dssp HHTCSEEEEEGGGCCCHHHHHHHHHHHHHHTCEEEEECCTTCSSCCHHHHHHHHTTCCEEESSTTSTTSSSTTTGGGGGG
T ss_pred HHHHCEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHC
T ss_conf 71132144775235675899999876754183589760535400200214887579730332025677786631567624
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~nvlpsSTnPT~P~t~nt~~EhldMlmvcHhL~~~ipeDvafAesRiR~eTiaAEdvLhD~GaiSi~sSDsQaMGRvGE 240 (385)
T d1ejxc2 161 HPNILPSSTNPTLPYTLNTIDEHLDMLMVCHHLDPDIAEDVAFAESRIRRETIAAEDVLHDLGAFSLTSSDSQAMGRVGE 240 (385)
T ss_dssp CTTEEEEEESTTSSCBTTHHHHHHHHHHHC----------CHHHHHHSCHHHHHHHHHHHHTTSSCEEECCTTSSSCTTC
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHCCCEEECCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCC
T ss_conf 68535789998878866736764772332046898875677664233530123267776345743442153332576774
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 vi~RtwqtA~kmk~~rG~l~~d~~~~DN~RvkRYIAKYTINPAIahGIsh~VGMFGA~G~A~~~tSvtFVSqaAid~gi~ 320 (385)
T d1ejxc2 241 VILRTWQVAHRMKVQRGALAEETGDNDNFRVKRYIAKYTINPALTHGIAHEVGMFGALGSARHHCRLTFLSQAAAANGVA 320 (385)
T ss_dssp HHHHHHHHHHHHHHHHCSCTTCCSSSCHHHHHHHHHHHTHHHHHHTTCTTTSSCGGGSHHHHHHHCEEEECHHHHHTTHH
T ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCCCEECCCCCCCCCCCCCCEEEECHHHHHCCCH
T ss_conf 11020787999987603687777777624777666662368188768455135323456555457138856888867684
Q ss_pred ----------------------------------------------------------------E
Q ss_conf ----------------------------------------------------------------8
Q 002647 518 ----------------------------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~LgL~K~lvpVkn~R~ItK~DM~~Nda~P~IeVDPeTYeV~aDGelltcePA~~LPLAQRYFLF 385 (385)
T d1ejxc2 321 ERLNLRSAIAVVKGCRTVQKADMVHNSLQPNITVDAQTYEVRVDGELITSEPADVLPMAQRYFLF 385 (385)
T ss_dssp HHTTCCSEEEECCCTTTCCGGGSTTCCCCCCEEECTTTCCEEETTEECCCCCBSSCSSSTTTCCC
T ss_pred HHHCCCCCEEEECCCCCCCHHHHHCCCCCCCEEECCCCEEEEECCEECCCCCCCCCCCHHCCCCC
T ss_conf 77388760686148887787786015789982789997689989999046765667631110176
|
| >d1rrma_ e.22.1.2 (A:) Lactaldehyde reductase FucO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Dehydroquinate synthase-like superfamily: Dehydroquinate synthase-like family: Iron-containing alcohol dehydrogenase domain: Lactaldehyde reductase FucO species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29038.72 Aligned_cols=1 Identities=100% Similarity=1.633 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 m~~~~~~~~~~~fG~g~l~~l~~~l~~~G~k~~Livt~~~~~~~g~~~~v~~~L~~~gi~~~vf~~v~~~p~~~~v~~~~ 80 (385)
T d1rrma_ 1 MANRMILNETAWFGRGAVGALTDEVKRRGYQKALIVTDKTLVQCGVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGL 80 (385)
T ss_dssp CCEEEECCSEEEESTTGGGGHHHHHHHHTCCEEEEECBHHHHHTTHHHHHHHHHHHTTCEEEEECBCCSSCBHHHHHHHH
T ss_pred CCCEEECCCCCEECCCHHHHHHHHHHHCCCCEEEEEECCCHHHCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHH
T ss_conf 99526669972798689999999999769997999989655658089999999987598599986826997989999886
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~D~IiaiGGGS~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~lP~i~IPTtagTgse~t~~avi~~~~~~~ 160 (385)
T d1rrma_ 81 GVFQNSGADYLIAIGGGSPQDTCKAIGIISNNPEFADVRSLEGLSPTNKPSVPILAIPTTAGTAAEVTINYVITDEEKRR 160 (385)
T ss_dssp HHHHHHTCSEEEEEESHHHHHHHHHHHHHHHCGGGTTSGGGSEECCCCSCCSCEEEEECSSSCCTTTCSEEEEEETTTTE
T ss_pred HHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 54303588889866988422699999999638753026665043222478774674366544643234442224444331
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 K~~~~~~~~~P~~~i~Dp~l~~~~P~~~~a~~g~Dal~h~~E~~~s~~~~p~~~~~a~~a~~~~~~~l~~~~~~~~~~~~ 240 (385)
T d1rrma_ 161 KFVCVDPHDIPQVAFIDADMMDGMPPALKAATGVDALTHAIEGYITRGAWALTDALHIKAIEIIAGALRGSVAGDKDAGE 240 (385)
T ss_dssp EEEEECGGGCCSEEEECGGGTTTSCHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred EEEEEEEECCCCCCCCHHHHHCCCCHHEEEECHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_conf 01355420135322006777327980126400364664112111113320001277899999999752432000056899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~a~~~ag~~~~~~~~g~~hai~~~l~~~~~i~HG~a~ai~lp~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 320 (385)
T d1rrma_ 241 EMALGQYVAGMGFSNVGLGLVHGMAHPLGAFYNTPHGVANAILLPHVMRYNADFTGEKYRDIARVMGVKVEGMSLEEARN 320 (385)
T ss_dssp HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHGGGSTTHHHHHHHHTTCCCTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
T ss_conf 99999999976651676400053203200233457510001436889987335269999999998388656999899999
Q ss_pred ----------------------------------------------------------------E
Q ss_conf ----------------------------------------------------------------8
Q 002647 518 ----------------------------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------------------------a 518 (897)
|
T Consensus 321 ~~i~~i~~~~~~lglP~~L~d~Gv~~~~l~~ia~~a~~~~~~~~nP~~~t~~di~~il~~a~~g~ 385 (385)
T d1rrma_ 321 AAVEAVFALNRDVGIPPHLRDVGVRKEDIPALAQAALDDVCTGGNPREATLEDIVELYHTAWEGG 385 (385)
T ss_dssp HHHHHHHHHHHHTTCCSSGGGGTCCGGGHHHHHHHHHTCGGGGGCSSCCCHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 99999999999859999988829899999999999985720059994389999999999997489
|
| >d1ir6a_ c.107.1.2 (A:) Exonuclease RecJ {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: DHH phosphoesterases superfamily: DHH phosphoesterases family: Exonuclease RecJ domain: Exonuclease RecJ species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=29034.27 Aligned_cols=1 Identities=0% Similarity=-1.755 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~l~~m~~A~~~i~~ai~~~e~I~I~gDyD~DGitS~aIl~~~L~~~g~~~~~~Ip~R~~eGyGl~~~~i~~~~~~ 80 (385)
T d1ir6a_ 1 PLALLPLKGLREAAALLEEALRQGKRIRVHGDYDADGLTGTAILVRGLAALGADVHPFIPHRLEEGYGVLMERVPEHLEA 80 (385)
T ss_dssp CCCCCCCTTHHHHHHHHHHHHHTTCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEECCCTTTSCSSCCGGGHHHHHTT
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHC
T ss_conf 97676735899999999999977997999927786067999999999998899759987786656998689999998533
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~LiItvD~G~~~~e~i~~~~~~gi~vIv~DHH~~~~~~~~~~iv~~~~~~~~~~~~~gaGva~~l~~~l~~~~~~~~~~ 160 (385)
T d1ir6a_ 81 SDLFLTVDCGITNHAELRELLENGVEVIVTDHHTPGKTPPPGLVVHPALTPDLKEKPTGAGVAFLLLWALHERLGLPPPL 160 (385)
T ss_dssp CSEEEESSCCTTCGGGHHHHTTSCCEEEEECCSCCCSSCCSSEEECGGGSTTCCCCCCHHHHHHHHHHHHHHTTTCCCCG
T ss_pred CCEEEEECCCCCCHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHCHH
T ss_conf 77699823652203667667632872321465465657401212157678850101302578999999886432442202
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~l~L~aiGtiaD~~pL~~eNR~lv~~gl~~~~~~~~~g~~~L~~~~~~~~~~~di~f~i~P~iNA~GRl~~a~~a~~lL 240 (385)
T d1ir6a_ 161 EYADLAAVGTIADVAPLWGWNRALVKEGLARIPASSWVGLRLLAEAVGYTGKAVEVAFRIAPRINAASRLGEAEKALRLL 240 (385)
T ss_dssp GGHHHHHHHHHHTTCCCSSHHHHHHHHHHHHCTTCSCHHHHHHHHHTTCCSCSHHHHHTHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHH
T ss_conf 44455456455455401367889987777785114558899997542213201221111131113334444310212444
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~a~~~a~~l~~~N~~Rk~~~~~i~~~a~~~~~~~~~~i~~~~~~~~~GviGivAsrl~~~~~kP~iv~~~~kGS 320 (385)
T d1ir6a_ 241 LTDDAAEAQALVGELHRLNARRQTLEEAMLRKLLPQADPEAKAIVLLDPEGHPGVMGIVASRILEATLRPVFLVAQGKGT 320 (385)
T ss_dssp HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCTTSSSEEEECTTCCHHHHHHHHHHHHHHHCSCEEEEETTEEE
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCEEE
T ss_conf 41236789999999887777899999999999875430335159995377662022045899999729978999667387
Q ss_pred ----------------------------------------------------------------E
Q ss_conf ----------------------------------------------------------------8
Q 002647 518 ----------------------------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~Rs~~g~~l~~~l~~~~~~l~~~GGH~~AaG~~i~~~~~~~F~~~l~~~~~~~~~~~~~~~~~d~ 385 (385)
T d1ir6a_ 321 VRSLAPISAVEALRSAEDLLLRYGGHKEAAGFAMDEALFPAFKARVEAYAARFPDPVREVALLDL 385 (385)
T ss_dssp EECCSSCCHHHHHHTTGGGCSEEEECSSEEEEECCGGGHHHHHHHHHHHHHSSCCTTTTCCSTTC
T ss_pred EECCCCCCHHHHHHHHHCHHHCCCCHHHCCEEEECHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC
T ss_conf 76899978999999874530137991670467974989999999999999856353220442479
|
| >d1xmxa_ c.52.1.26 (A:) Hypothetical protein VC1899 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Restriction endonuclease-like superfamily: Restriction endonuclease-like family: Hypothetical protein VC1899 domain: Hypothetical protein VC1899 species: Vibrio cholerae [TaxId: 666]
Probab=100.00 E-value=0 Score=29034.24 Aligned_cols=1 Identities=0% Similarity=0.238 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~m~~hv~~i~~~~~~n~~p~l~~~~~p~~~v~i~t~~~~~~~e~L~~~lk~~~i~~e~~~i~~~~d~~~I~~~l~~~~~ 80 (385)
T d1xmxa_ 1 NAMAIHVGIIDQDPVRLVTPLLDHRTVSRHIIFIGDHTQTVIYQRLSDVLNKRNISTDFFEIPAGSNTSAIKSAIRELAE 80 (385)
T ss_dssp CTTEEEEEECCSSCHHHHHHHHSTTCCCCEEEEEECGGGHHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHHHH
T ss_pred CCEEEEEEEECCCCHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 96289999963772435568654788886699996743699999999999846986168745875576999999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~v~lN~TGGTK~Msl~ay~~~r~~~~~~~Y~d~~~~rl~~l~~~~~~~~~~~~~i~i~d~l~~~~~~~~~~~~ 160 (385)
T d1xmxa_ 81 TLKARGEEVKFNASCGLRHRLLSAYEVFRSYHWPIFVVEPNSDCLCWLYPEGNNDTQVQDRITIADYLTIFGARGEFNEH 160 (385)
T ss_dssp HHHHHTCEEEEECSSSCHHHHHHHHHHHHHTTCCEEEECTTTCEEEEEESTTSCCEECCCCCCHHHHHHHTTCEEECC--
T ss_pred HHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCHHCCCC
T ss_conf 62203873999916766888999999998559846999769966999667767675577878899999984033000566
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~l~~~~~~~~~el~~~l~~ln~~~~~~~~~~~~~~~~s~~~~~~~~~~~ll~~l~~~~~~~~~~~~l~F 240 (385)
T d1xmxa_ 161 QLSPQLDQQLYQLGERWASNALELGPGLATLNYLATTCRKEQKLDVELSDKQQGYRELNLLLSDLVEAKIASYENGILTF 240 (385)
T ss_dssp --CHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTCSEEECCHHHHTCHHHHHHHHHHHHTTSEEEETTEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCEEEE
T ss_conf 68866789999999998634776767999999986512212010244462244536788999988753432214863231
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~a~~Fl~G~WLE~yv~~~l~~~~~~~~~~~d~~~~v~i~~~~~~~~~~nElDv~~~~~~~l~~IECKt~~~~~~~~~ 320 (385)
T d1xmxa_ 241 INEEARRFANGEWLETLVHSTVKQIQDDMPTIQDRSLNVQVYRQLGEREVRNELDVATVVNNKLHIIECKTKGMRDDGDD 320 (385)
T ss_dssp SSHHHHHHHHTTHHHHHHHHHHHHHHTTCTTEEEEEEEEEEEEEETTEEEEEEEEEEEEETTEEEEEEEESSCCCC-CCC
T ss_pred CHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCEEEEEEEECCEEEEEEECCCCCCCCHHH
T ss_conf 41778743588089999999999877540445026767798326888765532689999799999999568887754578
Q ss_pred ----------------------------------------------------------------E
Q ss_conf ----------------------------------------------------------------8
Q 002647 518 ----------------------------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~l~kl~~l~~~lgG~~~r~~LVs~~~~~~~~~~ra~~~~i~vI~~~~l~~l~~~L~~w~~~~~~~ 385 (385)
T d1xmxa_ 321 TLYKLESLRDLLGGLQARAMLVSFRPLRHNDITRAEDLGLALIGPDELKDLKTHLTQWFKAAGGN 385 (385)
T ss_dssp HHHHHHHHHHHHHGGGCEEEEEESSCCCHHHHHHHHHHTCEEECGGGGGGHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHCCC
T ss_conf 89999999998289532499999058847799999866949983888899999999999973799
|
| >d1uhga_ e.1.1.1 (A:) Ovalbumin {Hen (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Serpins superfamily: Serpins family: Serpins domain: Ovalbumin species: Hen (Gallus gallus) [TaxId: 9031]
Probab=100.00 E-value=0 Score=29033.20 Aligned_cols=1 Identities=0% Similarity=-0.858 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~l~~~~~~Fa~~l~~~l~~~~~~~N~v~SP~si~~~Laml~~GA~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~~~~~ 80 (385)
T d1uhga_ 1 GSIGAASMEFCFDVFKELKVHHANENIFYCPIAIMSALAMVYLGAKDSTRTQINKVVRFDKLPGFGDSIEAQCGTSVNVH 80 (385)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHCTTSCEEECHHHHHHHHHHHHTTCCHHHHHHHHHHHTCTTCTTCSHHHHTTTTSCTTTT
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHH
T ss_conf 96789999999999999861396986998889999999999986775899999997388877664301444203388999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~~l~v~~~~~~~~~f~~~~~~~y~~~~~~~df~~~~~~a~~~IN~wv~~~T~g~i~~~ 160 (385)
T d1uhga_ 81 SSLRDILNQITKPNDVYSFSLASRLYAEERYPILPEYLQCVKELYRGGLEPINFQTAADQARELINSWVESQTNGIIRNV 160 (385)
T ss_dssp HHHHHHHHHHTSCCSSEEEEEEEEEEEETTSCBCHHHHHHHHHHCSSCEEEECCTTTHHHHHHHHHHHHHHHTTTCSCCC
T ss_pred HHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999999963899873699998888866765448899999987097334564311799999999999998706886566
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 v~~~~l~~~t~l~lina~~f~~~W~~~F~~~~t~~~~F~~~~~~~~~v~~m~~~~~~~~~~~~~~~~~~v~Lpy~~~~~s 240 (385)
T d1uhga_ 161 LQPSSVDSQTAMVLVNAIVFKGLWEKAFKDEDTQAMPFRVTEQESKPVQMMYQIGLFRVASMASEKMKILELPFASGTMS 240 (385)
T ss_dssp SCTTSSCTTCCEEEEEEEEEEECEEECCCGGGCEEEEECCCC--CEEEEEEEEEEEEEEEEEGGGTEEEEEEEBTTSSEE
T ss_pred CCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEHHHEECCCCCCCCCCCCCCEEEECCCCCCCEE
T ss_conf 78667896544114542799542046664555540664258994353002001021234545566817887132489758
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 m~iilP~~~~~l~~~~~~l~~~~l~~~~~~~~~~~~~v~l~lPkF~i~~~~dl~~~L~~lGl~~~F~~~adfs~is~~~~ 320 (385)
T d1uhga_ 241 MLVLLPDEVSGLEQLESIINFEKLTEWTSSNVMEERKIKVYLPRMKMEEKYNLTSVLMAMGITDVFSSSANLSGISSAES 320 (385)
T ss_dssp EEEEEESSTTCHHHHHHHCCHHHHHHHTSTTTCEEEEEEEEEECEEEEEEEEHHHHHHHHTCCGGGSTTCCCTTTBCSTT
T ss_pred EEEEECCCCCCHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEEEEEEECCEEHHHHHHHCCCCHHHCCCCCCCCCCCCCC
T ss_conf 99997776676155554213556999763430424599997104876311007998875598111068787656779998
Q ss_pred ----------------------------------------------------------------E
Q ss_conf ----------------------------------------------------------------8
Q 002647 518 ----------------------------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------------------------a 518 (897)
=
T Consensus 321 l~vs~i~q~~~i~v~E~Gt~a~a~t~~~~~~~~~~~~f~~drPF~f~I~~~~t~~~lf~G~v~~P 385 (385)
T d1uhga_ 321 LKISQAVHAAHAEINEAGREVVGSAEAGVDAASVSEEFRADHPFLFCIKHIATNAVLFFGRCVSP 385 (385)
T ss_dssp CCEEEEEEEEEEEECSCEEECCCHHHHHHHHTTCCCEEECCSCEEEEEEETTTCCEEEEEEESCC
T ss_pred CEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCCEEEEEEECCC
T ss_conf 06552788999998998713010120001367899779913999999998999968999994398
|
| >d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glucose oxidase species: Aspergillus niger [TaxId: 5061]
Probab=100.00 E-value=0 Score=29030.19 Aligned_cols=1 Identities=0% Similarity=-0.659 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~p~~~~~~tyD~IIVGsG~aG~vlA~rLse~~~~~VLvLEaG~~~~~~~~~~~~~~~~~~~~~~~~dw~~~t 80 (385)
T d1cf3a1 1 GIEASLLTDPKDVSGRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDIFGSSVDHAYET 80 (385)
T ss_dssp CHHHHSBCCGGGTTTCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEEESSCCCTTSCHHHHBGGGTTTTTTSTTBCCEEC
T ss_pred CCCHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC
T ss_conf 96605218912126996889998968899999999987879829998889998787832048767755218978768605
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~r~~~~~~G~~lGGsS~in~~~~~R~~~~d~d~w~~~~~~~gw~~~~l~Pyf~k~E~~~~~~~~~~~~~~~~~~ 160 (385)
T d1cf3a1 81 VELATNNQTALIRSGNGLGGSTLVNGGTWTRPHKAQVDSWETVFGNEGWNWDNVAAYSLQAERARAPNAKQIAAGHYFNA 160 (385)
T ss_dssp CCCTTTSCCCEECCBCSTTGGGGTSCCBCCCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHHEEECCCCHHHHHHTCCCCG
T ss_pred CCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 57677894365221002466512331353215866611210036878676336688999887610787311221122355
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~g~~~~~~~~~~~~~~~~~p~~~~~~~a~~~~G~~~~~d~n~~~~~~~~~~~~~~~~~~~~~~s~~~~~~p~~~~~nl 240 (385)
T d1cf3a1 161 SCHGVNGTVHAGPRDTGDDYSPIVKALMSAVEDRGVPTKKDFGCGDPHGVSMFPNTLHEDQVRSDAAREWLLPNYQRPNL 240 (385)
T ss_dssp GGSCSSSSEEEBCCCCSSCBCTHHHHHHHHHHTTTCCBCCCTTSSCCCEEECCCBSBCTTCBBCCHHHHHTGGGTTCTTE
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHCCCCC
T ss_conf 55677543334565545556878999999999769997677555665533223332322333223556533732107743
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~i~t~~~V~rI~~~~~~~~~ra~GV~~~~~~g~~~~v~A~keVILsAGAi~SP~LLl~SGIGp~~~L~~~gI~~~~dlP~ 320 (385)
T d1cf3a1 241 QVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYSGIGMKSILEPLGIDTVVDLPV 320 (385)
T ss_dssp EEEESCEEEEEEEECSSSSCEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHHTTBSCHHHHGGGTCCCSBCCCT
T ss_pred CCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCEEEEEECCEEEECCCHHHCHHHHHHCCCCCHHHHHHCCCCEEEECCC
T ss_conf 33377368888871899654799999986899789999688899868535499999865998378998779986998974
Q ss_pred ----------------------------------------------------------------E
Q ss_conf ----------------------------------------------------------------8
Q 002647 518 ----------------------------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------------------------a 518 (897)
-
T Consensus 321 g~~~~~~~~~~~vv~~~~~v~g~~~lr~v~~s~~p~~~~~~~~~~~~~~a~~~~d~i~~~~~~~~ 385 (385)
T d1cf3a1 321 GLCSMMPKEMGGVVDNAARVYGVQGLRVIDGSIPPTQMSSHVMTVFYAMALKISDAILEDYASMQ 385 (385)
T ss_dssp TCTCBSCGGGTCSBCTTSBBTTCBSEEECSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 04206887766614665542660571742575786212675148799985366789998775449
|
| >d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cyp175a1 species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=29028.52 Aligned_cols=1 Identities=0% Similarity=-0.825 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~dp~~~~~~~~~kyg~v~~~~~~~p~v~v~dp~~v~~il~~~~~~~~~~~~~~~~~~~G~gl~ 80 (385)
T d1n97a_ 1 MKRLSLREAWPYLKDLQQDPLAVLLAWGRAHPRLFLPLPRFPLALIFDPEGVEGALLAEGTTKATFQYRALSRLTGRGLL 80 (385)
T ss_dssp CEECCHHHHHHHHHHHHHCHHHHHHHHHHHCSEEEECCTTCCEEEECSHHHHHHHHHCTTEECCSHHHHHHHHHHCSSTT
T ss_pred CCCCCCCCCCHHHHHHHHCHHHHHHHHHHHCCCEEEEECCEEEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEE
T ss_conf 98888553538799987799999999999789789996998799989999999997289977688607779998579500
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~g~~wk~~R~~l~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~vdl~~~l~~~~~~vi~~~~fg~~~~~~~~~~~~~~ 160 (385)
T d1n97a_ 81 TDWGESWKEARKALKDPFLPKNVRGYREAMEEEARAFFGEWRGEERDLDHEMLALSLRLLGRALFGKPLSPSLAEHALKA 160 (385)
T ss_dssp TCCHHHHHHHHHHHCGGGSHHHHHTTHHHHHHHHHHHHHTCCSCCEEHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
T ss_conf 37979999999997234144432231025778999987650455335788888875520255553465432015666665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ei~~~~~~~l~ag~dTt~~~l~~~l~~L~~~ 240 (385)
T d1n97a_ 161 LDRIMAQTRSPLALLDLAAEARFRKDRGALYREAEALIVHPPLSHLPRERALSEAVTLLVAGHETVASALTWSFLLLSHR 240 (385)
T ss_dssp HHHHHHHHHCGGGGGCHHHHHHHHHHHHHHHHHHGGGTTSTTGGGSCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 56777777666665455899999986515678899887511104697889999999988765024211211025676541
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 P~v~~~l~~E~~~~~a~i~EtlRl~p~~~~~~r~~~~d~~~~g~~i~~g~~v~~~~~~~~~~~~~dp~~F~PeRf~~~~~ 320 (385)
T d1n97a_ 241 PDWQKRVAESEEAALAAFQEALRLYPPAWILTRRLERPLLLGEDRLPPGTTLVLSPYVTQRLHFPDGEAFRPERFLEERG 320 (385)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHSCSSCCEEEEESSCEEETTEEECTTCEEEECHHHHHHHSSTTTTSCCTTHHHHSCC
T ss_pred CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 02333333333332101201122333332212233322233333333333333332210011478876638432376567
Q ss_pred ----------------------------------------------------------------E
Q ss_conf ----------------------------------------------------------------8
Q 002647 518 ----------------------------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~lpFG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~p~~~~~~r~r~ 385 (385)
T d1n97a_ 321 TPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFPRVLAQVTLRPEGGLPARPRE 385 (385)
T ss_dssp CCBTTBCTTCCSTTCCTTHHHHHHHHHHHHHHHHTTCBCCCCCCCCEEESSSEEETTCCEECCBC
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCEEEEECCCEEEEEEC
T ss_conf 88887067899765690399999999999999998378896898732460578646981788609
|
| >d2c5wb1 e.3.1.1 (B:266-650) Penicillin-binding protein 1a, transpeptidase domain {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: Penicillin-binding protein 1a, transpeptidase domain species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=0 Score=29027.97 Aligned_cols=1 Identities=0% Similarity=0.072 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~yp~~~d~~~~e~i~~~~~~~~~~~~~~G~~I~tTiD~~lQ~~~e~~~~~~~~~~~~~~~~~~a~vv~d~~TG~IlA~v 80 (385)
T d2c5wb1 1 SNYPAYMDNYLKEVINQVEEETGYNLLTTGMDVYTNVDQEAQKHLWDIYNTDEYVAYPDDELQVASTIVDVSNGKVIAQL 80 (385)
T ss_dssp CCSCGGGHHHHHHHHHHHHHHHSCCTTTSCEEEEECCCHHHHHHHHHHHHCSSSCCCSCSSCEEEEEEEETTTCBEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEE
T ss_conf 99748999999999998777644232069987994789999999999997534312678663289999988999399999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~N~a~~~~~~pGStfKp~~~yaaAle~g~~~~~~~~~~d~~~~~~~~~~~~~n~~~~~~G~itl~~al 160 (385)
T d2c5wb1 81 GARHQSSNVSFGINQAVETNRDWGSTMKPITDYAPALEYGVYESTATIVHDEPYNYPGTNTPVYNWDRGYFGNITLQYAL 160 (385)
T ss_dssp CCSSCCCCCTTCCCTTTCCCSCCGGGHHHHHTHHHHHHTTSCSBSSCEEEESSCBCTTSSCBCCCTTSCCCEEEEHHHHH
T ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHH
T ss_conf 55655544434543201143467740447899999986497002331123454211136866422465565136650333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~S~N~~~~~l~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~tplqla~aya~iAngG~~~~P~~i~~i 240 (385)
T d2c5wb1 161 QQSRNVPAVETLNKVGLNRAKTFLNGLGIDYPSIHYSNAISSNTTESDKKYGASSEKMAAAYAAFANGGTYYKPMYIHKV 240 (385)
T ss_dssp HTTCHHHHHHHHHHHCHHHHHHHHHTTTCBCSSCCGGGGSCCCCSSCCSSBSCCHHHHHHHHHHHHTTSEEECCBSEEEE
T ss_pred HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCC
T ss_conf 31655300345666403368999997087545653223445441135885256899999988765147643221430122
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~d~~~~~~~~~~~~~~v~s~~~a~~~~~~m~~vv~~GT~~~a~~~~~~vaGKTGTaq~~~~~~~~~~~~~~~~~~d~WFv 320 (385)
T d2c5wb1 241 VFSDGSEKEFSNVGTRAMKETTAYMMTDMMKTVLTYGTGRNAYLAWLPQAGKTGTSNYTDEEIENHIKTSQFVAPDELFA 320 (385)
T ss_dssp EETTSCEEECCCCEEECSCHHHHHHHHHHHHHHHHHSTTGGGCCTTCCCEEEEEECCCCHHHHHHTCCCSSCEESCEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 12344422123455420477888888764110135775221356565313565565666665444435564222205999
Q ss_pred ----------------------------------------------------------------E
Q ss_conf ----------------------------------------------------------------8
Q 002647 518 ----------------------------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------------------------a 518 (897)
-
T Consensus 321 G~~P~~~~~Vwvg~~~~~~~~~~~G~~~Aapi~~~im~~~~~~~~~~~f~~P~gi~~~g~~~~~~ 385 (385)
T d2c5wb1 321 GYTRKYSMAVWTGYSNRLTPLVGNGLTVAAKVYRSMMTYLSEGSNPEDWNIPEGLYRNGEFVFKN 385 (385)
T ss_dssp EECSSEEEEEEEECSSTTSCEEGGGGGHHHHHHHHHHHHHHSSSCCCCCCCCTTEEEETTEEEEC
T ss_pred ECCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCEEEECC
T ss_conf 55998899999940788887688722889999999999997269977799999867767089529
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=100.00 E-value=0 Score=29029.50 Aligned_cols=1 Identities=0% Similarity=-1.125 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~ipmrDG~~L~~~v~~P~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~ 80 (385)
T d2b9va2 1 HDPLSVQTGSDIPASVHMPTDQQRDYIKREVMVPMRDGVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMRE 80 (385)
T ss_dssp CCTTTCCCSCSCC---------CCSEEEEEEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 99754345777786665887667797686889989999889999997189996018999816788876556775322354
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~a~~Gy~vv~~d~RG~g~S~G~~~~~~~~~~~~~~~~~~e~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~ 160 (385)
T d2b9va2 81 VLPQGDDVFVEGGYIRVFQDIRGKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGF 160 (385)
T ss_dssp HSCGGGHHHHHTTCEEEEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHH
T ss_pred CCCHHHHHHHHCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHH
T ss_conf 43057999996896899976774368898512045210011220155787799999999856674446410045667899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~a~~~~~~l~a~~~~~~~~d~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (385)
T d2b9va2 161 TVVMALLDPHPALKVAAPESPMVDGWMGDDWFHYGAFRQGAFDYFVSQMTARGGGNDIPRRDADDYTNFLKAGSAGSFAT 240 (385)
T ss_dssp HHHHHHTSCCTTEEEEEEEEECCCTTTBSSSEETTEEBTTHHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHH
T ss_pred HHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCH
T ss_conf 99999854677634999812456532101234773011210899986541014586411114678889987252445320
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~p~~~~~~~~p~~d~~w~~~s~~~~~~~~~i~vP~l~~~g~~dd~~~~g~~~~~~~l~~~~~~~~~~LiiGPw~ 320 (385)
T d2b9va2 241 QAGLDQYPFWQRMHAHPAYDAFWQGQALDKILAQRKPTVPMLWEQGLWDQEDMWGAIHAWQALKDADVKAPNTLVMGPWR 320 (385)
T ss_dssp HTTGGGCHHHHHHHHCCSSSHHHHTTCHHHHHHHHCCCSCEEEEEETTCSSCSSHHHHHHHHHHHTTCSSCEEEEEESCC
T ss_pred HCCCCHHHHHHHHCCCCCCCHHHHHCCHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf 10442134566530376543122315846888633556762899841368765433789999875156888579993776
Q ss_pred ----------------------------------------------------------------E
Q ss_conf ----------------------------------------------------------------8
Q 002647 518 ----------------------------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------------------------a 518 (897)
=
T Consensus 321 H~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~WFD~~LKG~~~~~~~p~v~~~~~G~~~Wr~~~~W 385 (385)
T d2b9va2 321 HSGVNYNGSTLGPLEFEGDTAHQYRRDVFRPFFDEYLKPGSASVHLPDAIIYNTGDQKWDYYRSW 385 (385)
T ss_dssp TTGGGSCCSEETTEECSSCHHHHHHHHTHHHHHHHHHSTTCCCCCCCSEEEEETTTTEEEEESSS
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEECCCC
T ss_conf 77866566666664567520013689999999999708999999999879998789827418979
|
| >d2ix0a4 b.40.4.16 (A:173-557) Exoribonuclease 2, RNB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: OB-fold superfamily: Nucleic acid-binding proteins family: RNB domain-like domain: Exoribonuclease 2, RNB species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29034.94 Aligned_cols=1 Identities=0% Similarity=-0.227 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 e~~~~~~~~~~~~~~~R~Dl~~l~~~tID~~~a~d~DDAisie~~~~~~~~l~VHIADva~~v~~~s~Ld~~A~~R~~S~ 80 (385)
T d2ix0a4 1 EAPDGVATEMLDEGLVREDLTALDFVTIDSASTEDMDDALFAKALPDDKLQLIVAIADPTAWIAEGSKLDKAAKIRAFTN 80 (385)
T ss_dssp SCCCCCCCCCCCCCCCCEECTTSCCBEEECSSCCCCCEEEEEEEEGGGEEEEEEEECCGGGTSCTTSHHHHHHHHHCBCE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCHHHHHCCCCHHHHHHHHHCCCE
T ss_conf 99875431001467874208899989976999942665589999689919999998777887598999999999968838
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 Ylp~~~~pMLP~~ls~~~~SL~~~~~r~a~s~~~~l~~~g~i~~~~~~~~s~I~s~~~ltY~~v~~~l~~~~~~~~~~~~ 160 (385)
T d2ix0a4 81 YLPGFNIPMLPRELSDDLCSLRANEVRPVLACRMTLSADGTIEDNIEFFAATIESKAKLVYDQVSDWLENTGDWQPESEA 160 (385)
T ss_dssp EETTEEECSSCHHHHHTTSSCCTTCEEEEEEEEEEECTTCCBCSCCEEEEEEEECCCEEEHHHHHHHHTTCSSCCCSSHH
T ss_pred ECCCCCCCCCCHHHHHHHCCCCCCCCEEEEEEEEEECCCCCEECCCEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHH
T ss_conf 89999778898166420014566532047778999856761401336876789726757499999997403334532022
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~l~~L~~~~~~lr~~R~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~lieE~MilaN~~va~~l~~~~~~~i 240 (385)
T d2ix0a4 161 IAEQVRLLAQICQRRGEWRHNHALVFKDRPDYRFILGEKGEVLDIVAEPRRIANRIVEEAMIAANICAARVLRDKLGFGI 240 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCCCCCCCEEEEEECTTSCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 59999999999999999874167621343022010244455413787404088888888887766899999997348873
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~R~~~~p~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~r~~~~a~ys~~~~~H~gLgl~~Y 320 (385)
T d2ix0a4 241 YNVHMGFDPANADALAALLKTHGLHVDAEEVLTLDGFCKLRRELDAQPTGFLDSRIRRFQSFAEISTEPGPHFGLGLEAY 320 (385)
T ss_dssp EEEBCCSCGGGHHHHHHHHHHTTCCCCTTGGGSHHHHHHHHHHHHHSSSSHHHHHTGGGCCCCEEESSCCCBTTTTBSCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCC
T ss_conf 22222357477899999999710366855334625677776520355416789999998643103798877413084612
Q ss_pred ----------------------------------------------------------------E
Q ss_conf ----------------------------------------------------------------8
Q 002647 518 ----------------------------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------------------------a 518 (897)
-
T Consensus 321 thfTSPIRRY~DLivhrqL~a~L~~~~~~~~~~ei~~~~~~~~~~a~~aer~~~~~~~~~~lk~~ 385 (385)
T d2ix0a4 321 ATWTSPIRKYGDMINHRLLKAVIKGETATRPQDEITVQMAERRRLNRMAERDVGDWLYARFLKDK 385 (385)
T ss_dssp BCCSCTTTBHHHHHHHHHHHHHHHTCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred EEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 01586776377899999999997699999889999999999999999999999999999985789
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=100.00 E-value=0 Score=28957.19 Aligned_cols=1 Identities=0% Similarity=-0.560 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~pi~~~f~D~~l~~~~~~~l~~~~~~~~~~~~~l~~l~~L~l~~~~I~~l~gl~~L~nL~~L~Ls~N~l~~ 80 (384)
T d2omza2 1 LGSATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTD 80 (384)
T ss_dssp CSCCCCSSCEEHHHHSCSHHHHHHHHHHTTCSSTTSEECHHHHTTCCEEECCSSCCCCCTTGGGCTTCCEEECCSSCCCC
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCC
T ss_conf 97652589998331320889999999986777778863988957878998999898776242458999989681881798
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 l~~l~~L~~L~~L~L~~n~i~~i~~l~~l~~L~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 160 (384)
T d2omza2 81 ITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 160 (384)
T ss_dssp CGGGTTCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 86334771101030134333222211123343334433222222222222222211213466313100232222112222
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~l~~n~i~~~~~~~~~~~L~~L~l~~n~l~~~~~l~~l 240 (384)
T d2omza2 161 FGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASL 240 (384)
T ss_dssp EEESCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCCGGGGGC
T ss_pred CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHCC
T ss_conf 21232201111245421101122243332110022353233303577447878644457787888877777896134325
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~L~~L~l~~n~l~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~l~~l~~~~n~l~~~~~~~~~~~l~~L~ls~n~l~ 320 (384)
T d2omza2 241 TNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNIS 320 (384)
T ss_dssp TTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCS
T ss_pred CCCCHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCEEECCCCCCC
T ss_conf 65341004467447877535546687754567445787732356522223323233333221000024676777788778
Q ss_pred ---------------------------------------------------------------E
Q ss_conf ---------------------------------------------------------------8
Q 002647 518 ---------------------------------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------------------------------a 518 (897)
|
T Consensus 321 ~l~~l~~l~~L~~L~L~~n~l~~l~~l~~l~~L~~L~l~~N~l~~l~~l~~l~~L~~L~L~~Na 384 (384)
T d2omza2 321 DISPVSSLTKLQRLFFANNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQA 384 (384)
T ss_dssp CCGGGGGCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCBCGGGTTCTTCSEEECCCEE
T ss_pred CCCCCCCCCCCCEEECCCCCCCCCHHHCCCCCCCEEECCCCCCCCCHHHCCCCCCCEEECCCCC
T ss_conf 9845366898898989899899974670899999898979958998000039999996397895
|
| >d1cs1a_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Cystathionine gamma-synthase, CGS species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=28964.89 Aligned_cols=1 Identities=200% Similarity=3.759 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~k~~T~~vh~G~~~~~~~gav~pPI~~sst~~~~~~~~~~~~~Y~R~~nPt~~~le~~la~LEgg~~a~~~sSGMaAi~~ 80 (384)
T d1cs1a_ 1 RKQATIAVRSGLNDDEQYGCVVPPIHLSSTYNFTGFNEPRAHDYSRRGNPTRDVVQRALAELEGGAGAVLTNTGMSAIHL 80 (384)
T ss_dssp CCHHHHHHHTTTTCCTTTCBSSCCBCCCSBBCCSBTTBCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHH
T ss_pred CCHHHHEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHH
T ss_conf 97404214689898888998259844888746089776568743189887899999999998299706884372799999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~l~~l~~~gd~vv~~~~~yg~t~~~~~~~~~~~g~~~~~~d~~d~~~~~~~~~~~t~~v~~EspsNP~l~v~Di~~i~~i 160 (384)
T d1cs1a_ 81 VTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHL 160 (384)
T ss_dssp HHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECTTCHHHHHHHHHTCCSEEEEECSCTTTCCCCCHHHHHHH
T ss_pred HHHHCCCCCCEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCEECCHHHHHHH
T ss_conf 98631445550013465200246665421122333222356788799986216666279971456653010457887554
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 a~~~g~~~vVDNT~atP~~~~Pl~~GaDiVvhS~TKyi~Ghsdv~~G~vv~~~~~~~~~~~~~~~~~G~~~~p~~a~ll~ 240 (384)
T d1cs1a_ 161 AREVGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLL 240 (384)
T ss_dssp HHHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHHHHHH
T ss_pred HHHCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH
T ss_conf 54148679971553474546664468889998063003667774443345782665420011221122024500389996
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 rgL~TL~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgL~s~p~h~l~~r~~~g~gg~~sf~l~~~~~~a~~f~~~L~l~~ 320 (384)
T d1cs1a_ 241 RGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFT 320 (384)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESSCHHHHHHHHHTCSSSE
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCE
T ss_conf 12111478998999999999996445886446641223301489998750689861268752466999999998389155
Q ss_pred ---------------------------------------------------------------E
Q ss_conf ---------------------------------------------------------------8
Q 002647 518 ---------------------------------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------------------------------a 518 (897)
|
T Consensus 321 ~a~SlGg~eSLi~~p~~~th~~~~~e~r~~~Gi~~~lvRlSvGlEd~eDLi~Dl~~AL~aa~~g 384 (384)
T d1cs1a_ 321 LAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAANKG 384 (384)
T ss_dssp EBSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHHTCC
T ss_pred ECCCCCCCCCEECCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCC
T ss_conf 5626687540430661015100799999866989296999865099999999999999986079
|
| >d3c0na2 f.8.1.1 (A:85-468) (Pro)aerolysin, pore-forming lobe {Aeromonas hydrophila [TaxId: 644]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Aerolisin/ETX pore-forming domain superfamily: Aerolisin/ETX pore-forming domain family: (Pro)aerolysin, pore-forming lobe domain: (Pro)aerolysin, pore-forming lobe species: Aeromonas hydrophila [TaxId: 644]
Probab=100.00 E-value=0 Score=28962.81 Aligned_cols=1 Identities=0% Similarity=-0.626 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ip~~~~~~~~~~d~~~~~~~~v~~~~~fi~pls~LAh~LGY~W~gg~~~q~Vged~~~~r~gd~w~~~~~n~g~c~gyrc 80 (384)
T d3c0na2 1 IPTLSALDIPDGDEVDVQWRLVHDSANFIKPTSYLAHYLGYAWVGGNHSQYVGEDMDVTRDGDGWVIRGNNDGGCDGYRC 80 (384)
T ss_dssp CCCCCCEEECSCCHHHHHHHHHTCTTTTHHHHHHHHHHHTBSCCSCTTCSSTTCSEEEEECSSSEEEEECCCSCCCSTTT
T ss_pred CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEECCCCCCEECCCCEEEECCCEEEEECCCCCCCCCEEE
T ss_conf 98654411389987887888762870011569999865073677677874114452566438767996256899774451
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~er~ki~~~nf~~~i~~~~f~~G~~~v~~~epi~t~s~~a~N~sDt~qt~itvt~~~t~T~TWSkT~s~~~s~sV~ik~s 160 (384)
T d3c0na2 81 GDKTAIKVSNFAYNLDPDSFKHGDVTQSDRQLVKTVVGWAVNDSDTPQSGYDVTLRGDTATNWSKTNTYGLSEKVTTKNK 160 (384)
T ss_dssp TSCCEEEEEEEEEEEEEEEEEECCCSEEEEEEEEEEEEEEEECSSSCBCCEEEEEEEEEEEEEEECCSSSGGGTCBCSSC
T ss_pred CCCCEEEEEEEEEEECCCCEECCCCEEECCCEEEEEEEEEECCCCCCCEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
T ss_conf 56215898756778657644427818844542899999997389886158899999998423898654778889999888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 f~iPligeteisvs~S~n~s~s~s~t~S~T~T~t~s~~VtVPP~Skv~V~i~l~rs~idVPYt~t~~I~Ydv~~~gFLRw 240 (384)
T d3c0na2 161 FKWPLVGETELSIEIAANQSWASQNGGSTTTSLSQSVRPTVPARSKIPVKIELYKADISYPYEFKADVSYDLTLSGFLRW 240 (384)
T ss_dssp EECCCCSSSCCCCEECTTSCGGGCCEEEEEEEECCEECCCBCTTEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEBCT
T ss_pred EECCEEEEEEEEEEEEEEEEEECCCCCEEEEEEEEEEEEECCCCCEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEC
T ss_conf 85663514469999976788850675137899888876301898359999999866873556899999998987116741
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 gGNa~~~hp~~Rpt~~~tf~~g~~~~~~~~i~yq~d~r~ipg~~~~wdW~w~~~~~g~~~m~~~~~~~~R~~~s~isG~f 320 (384)
T d3c0na2 241 GGNAWYTHPDNRPNWNHTFVIGPYKDKASSIRYQWDKRYIPGEVKWWDWNWTIQQNGLSTMQNNLARVLRPVRAGITGDF 320 (384)
T ss_dssp TCCCBTTCCSSCCEEEEEEEESSCCCSTTCHHHHHHTTTCGGGCSSBCHHHHHHHHCHHHHHHHHHHHTCCEEEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
T ss_conf 56213448988886426886057888743411243202357876511364155553567777777664222346434217
Q ss_pred ---------------------------------------------------------------E
Q ss_conf ---------------------------------------------------------------8
Q 002647 518 ---------------------------------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------------------------------a 518 (897)
+
T Consensus 321 ~a~sq~~g~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 384 (384)
T d3c0na2 321 SAESQFAGNIEIGAPVPLAADSKVRRARSVDGAGQGLRLEIPLDAQELSGLGFNNVSLSVTPAA 384 (384)
T ss_dssp EEEEEEECCCEECCCEEC-----------------CCEEECCCCHHHHHHHTCEEEEEEEEECC
T ss_pred EEEECCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCHHHHHHCCCCCEEEEEEECC
T ss_conf 8850211015524711158068642346664467863897347977886367674389976389
|
| >d1mtyb_ a.25.1.2 (B:) Methane monooxygenase hydrolase beta subunit {Methylococcus capsulatus [TaxId: 414]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Ferritin-like superfamily: Ferritin-like family: Ribonucleotide reductase-like domain: Methane monooxygenase hydrolase beta subunit species: Methylococcus capsulatus [TaxId: 414]
Probab=100.00 E-value=0 Score=28960.26 Aligned_cols=1 Identities=0% Similarity=-0.227 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~a~~~~~~~~~r~~~~~~~p~~rr~seYE~vT~~~qp~p~~~~~~~~~~~W~~~~~~g~p~y~~ 80 (384)
T d1mtyb_ 1 ERRRGLTDPEMAAVILKALPEAPLDGNNKMGYFVTPRWKRLTEYEALTVYAQPNADWIAGGLDWGDWTQKFHGGRPSWGN 80 (384)
T ss_dssp CCCCTTTCHHHHHHHHHHCCSSCSCSCCCTTTTSCCSSSSCCHHHHHHTTCSCCBTTSTTCCBCSCCSSCCTTCCCSSCG
T ss_pred CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEECCCCCCHHHCCCCCCCCCEEEECCCCCCCCCC
T ss_conf 98667998778899861277886667776424467577896643510227889956617767647764613899998886
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~Tal~~~DW~~frDP~q~~yrtY~~~qae~e~~v~~~~d~~~~~~~~~~l~~~w~~~~L~~~l~p~r~~E~ga~~~~a~ 160 (384)
T d1mtyb_ 81 ETTELRTVDWFKHRDPLRRWHAPYVKDKAEEWRYTDRFLQGYSADGQIRAMNPTWRDEFINRYWGAFLFNEYGLFNAHSQ 160 (384)
T ss_dssp GGCSCCCSCTTCCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGSCHHHHHTTTTTHHHHHHHHHHHHHHTTHH
T ss_pred CCCEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf 64313447746535801889999999999999999999999996696211999999999999860240799999987899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 i~r~~~g~~i~~a~~fqa~DeLR~aQ~i~~~~~~L~~~~pgf~~~~~~~k~~W~~dp~wQg~R~~vE~~l~~~~Dw~E~~ 240 (384)
T d1mtyb_ 161 GAREALSDVTRVSLAFWGFDKIDIAQMIQLERGFLAKIVPGFDESTAVPKAEWTNGEVYKSARLAVEGLWQEVFDWNESA 240 (384)
T ss_dssp HHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCCSHHHHHHHHHCSTTHHHHHHHHHHHHTCCCHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 98646868999999998766888999999999999874789862337998886048065779999998987114499999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 vA~Nlv~dpll~~L~~~~f~~~~Aa~nGD~~t~~l~~s~q~D~~Rh~~~~~alvk~~l~~dpe~~~~Nr~llq~Wi~~W~ 320 (384)
T d1mtyb_ 241 FSVHAVYDALFGQFVRREFFQRLAPRFGDNLTPFFINQAQTYFQIAKQGVQDLYYNCLGDDPEFSDYNRTVMRNWTGKWL 320 (384)
T ss_dssp HHHHHTHHHHHHHHHHHTTHHHHGGGGTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTCTTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
T ss_conf 99876488644899999999999997698047999999998999999899999999984585332668999999999999
Q ss_pred ---------------------------------------------------------------E
Q ss_conf ---------------------------------------------------------------8
Q 002647 518 ---------------------------------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~a~~Al~~~~pi~s~~p~~~~~~~~~~a~~~rv~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (384)
T d1mtyb_ 321 EPTIAALRDFMGLFAKLPAGTTDKEEITASLYRVVDDWIEDYASRIDFKADRDQIVKAVLAGLK 384 (384)
T ss_dssp HHHHHHHHHHGGGGGGSCTTSCCHHHHHHHHHHHHHHHHHHTGGGGTCCCCHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf 9999999987687610677878889999999999987653024103665458899999972369
|
| >d1b9ha_ c.67.1.4 (A:) 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) {Amycolatopsis mediterranei [TaxId: 33910]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) species: Amycolatopsis mediterranei [TaxId: 33910]
Probab=100.00 E-value=0 Score=28957.23 Aligned_cols=1 Identities=0% Similarity=1.068 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
|
T Consensus 1 ~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~g~~v~~fE~~~a~~~g~~~~v~~~SGt~Al~lal~~l~~~~gdeVi~p 80 (384)
T d1b9ha_ 1 KAPEFPAWPQYDDAERNGLVRALEQGQWWRMGGDEVNSFEREFAAHHGAAHALAVTNGTHALELALQVMGVGPGTEVIVP 80 (384)
T ss_dssp CCCCCCCSSCCCHHHHHHHHHHHHTSCCBTTTCSHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEEE
T ss_conf 98989898887999999999999739946568989999999999997969399967889999999998499988989981
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~t~~a~~~ai~~~g~~p~~~d~~~~~~~~d~~~~~~~i~~~tk~i~~~~~~g~~~d~~~i~~~~~~~~i~lieD~a~a~ 160 (384)
T d1b9ha_ 81 AFTFISSSQAAQRLGAVTVPVDVDAATYNLDPEAVAAAVTPRTKVIMPVHMAGLMADMDALAKISADTGVPLLQDAAHAH 160 (384)
T ss_dssp SSSCTHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTTEEEECCBCGGGCCCCHHHHHHHHHHHTCCBCEECTTCT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCEEC
T ss_conf 43223221222222233211233444435665441020023332222333322233443110222333356553104033
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ga~~~g~~~g~~g~~~~~Sf~~~K~i~~g~GG~i~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~n~rms~l~Aai 240 (384)
T d1b9ha_ 161 GARWQGKRVGELDSIATFSFQNGKLMTAGEGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASV 240 (384)
T ss_dssp TCEETTEEGGGSSSCEEEECCTTSSSCSSSCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHHHH
T ss_pred CCCCCCEECCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 60048983675520000024555434433431243224999998899985689876666432312356632235301213
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 g~~qL~~ld~~~~~R~~~~~~y~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rd~l~~~L~~~GI~~~~~y~ 320 (384)
T d1b9ha_ 241 LRAQLARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLTEERRNALVDRLVEAGLPAFAAFR 320 (384)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCCHHHHHHHHHHHHHTTCCEEECCC
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHCCCCEEEECC
T ss_conf 33343211321123433446666664225666443222222222333310001000222599999999987998553072
Q ss_pred ---------------------------------------------------------------E
Q ss_conf ---------------------------------------------------------------8
Q 002647 518 ---------------------------------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------------------------------a 518 (897)
+
T Consensus 321 plh~~~~~~~~~~~~~~~~~~~~~~Pna~~l~~~~l~LP~~~~Lt~e~ei~~I~~~i~~~l~~~ 384 (384)
T d1b9ha_ 321 AIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADAVARA 384 (384)
T ss_dssp CGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHHC
T ss_pred CHHCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHCEEECCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 2213978885488744433344679899999839798647999998999999999999999609
|
| >d1hn0a1 a.102.3.2 (A:235-618) Chondroitin ABC lyase I {Proteus vulgaris [TaxId: 585]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Chondroitin AC/alginate lyase family: Hyaluronate lyase-like catalytic, N-terminal domain domain: Chondroitin ABC lyase I species: Proteus vulgaris [TaxId: 585]
Probab=100.00 E-value=0 Score=28954.33 Aligned_cols=1 Identities=0% Similarity=-1.324 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~p~~~~T~~~~~~~d~ir~R~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~ng~~~g~pi~~~~~~ 80 (384)
T d1hn0a1 1 EPEIQFHNVKPQLPVTPENLAAIDLIRQRLINEFVGGEKETNLALEENISKLKSDFDALNIHTLANGGTQGRHLITDKQI 80 (384)
T ss_dssp CCCCCCCCCSSCCCCCHHHHHHHHHHHHHHHHHHHSSCCCTTCCCCCCHHHHHHHHHTTCCEECTTSCEECCCEECTTGG
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
T ss_conf 98777677899888896788899999999999872688652157777899999999985686456874247755562012
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~aY~~~g~~~~~~el~~~i~~~~d~l~dQg~~~gS~~~~~nww~~~i 160 (384)
T d1hn0a1 81 IIYQPENLNSQDKQLFDNYVILGNYTTLMFNISRAYVLEKDPTQKAQLKQMYLLMTKHLLDQGFVKGSALVTTHHWGYSS 160 (384)
T ss_dssp GGGCGGGSCHHHHHHHTTSEEHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHTTCSTTCCCSCCTTHHHHH
T ss_pred HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCEECCCCCCCCCHHHHHH
T ss_conf 20577676533344431266899999999999999747887322399999999999999872320378777673112238
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 r~~~~a~~Lm~d~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~n~D~~~t~~~~~l~~~Ll~~d~~e~i~~l~~l~ 240 (384)
T d1hn0a1 161 RWWYISTLLMSDALKEANLQTQVYDSLLWYSREFKSSFDMKVSADSSDLDYFNTLSRQHLALLLLEPDDQKRINLVNTFS 240 (384)
T ss_dssp HHHHHHHHHTHHHHHHTTCHHHHHHHHHHHGGGGHHHHTCCCCTTTTCHHHHHHTHHHHHHHHHTCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 77988999987753226789999999987446864245676677850378999999999999985599199999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~l~~~~~~vt~G~~dGfk~DGS~~qH~~~Y~gYg~~~l~~~~~~~~ll~gT~f~~~~~~~~~l~~~l~~~~~~~~~~~~ 320 (384)
T d1hn0a1 241 HYITGALTQVPPGGKDGLRPDGTAWRHEGNYPGYSFPAFKNASQLIYLLRDTPFSVGESGWNNLKKAMVSAWIYSNPEVG 320 (384)
T ss_dssp HHHHHHHHSCCSTTCSEECTTSCEEETTEECHHHHHHHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHHHHHTBSSBBC
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99887750478887886457887550678774269999999999999967998767989999999999999998454466
Q ss_pred ---------------------------------------------------------------E
Q ss_conf ---------------------------------------------------------------8
Q 002647 518 ---------------------------------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------------------------------a 518 (897)
.
T Consensus 321 ~~~~GR~p~~~~~~~~~~~a~~~~al~g~~~~D~~~A~~ylrl~~~~~~~~~~~~~~~~~pa~~ 384 (384)
T d1hn0a1 321 LPLAGRHPFNSPSLKSVAQGYYWLAMSAKSSPDKTLASIYLAISDKTQNESTAIFGETITPASL 384 (384)
T ss_dssp GGGCTTCTTSCCBGGGGHHHHHHHHTTSTTSCCHHHHHHHHHHHTCCHHHHHHHHSSCCCCCCC
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCC
T ss_conf 5555777899875543189999997078866799999999987347785416676158787879
|
| >d2fvka2 c.1.9.6 (A:57-440) Dihydropyrimidine amidohydrolase Pyd2 {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase), catalytic domain domain: Dihydropyrimidine amidohydrolase Pyd2 species: Yeast (Saccharomyces kluyveri) [TaxId: 4934]
Probab=100.00 E-value=0 Score=28953.22 Aligned_cols=1 Identities=0% Similarity=-0.193 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 G~ID~HvH~rePg~~~~~~~ed~~tgs~AAa~GGvTtvi~mp~~~p~~~~~~~~~~~~~~~~~~~a~~~~~vdy~~~~~~ 80 (384)
T d2fvka2 1 GGIDAHVHVDEPLKLLGDVVDTMEHATRSAVAGGTTTVVAFSTQDVSKKGPSALAESVKLDVDEYSEQTLYCDYGLHLIL 80 (384)
T ss_dssp CEEECCBCCCCTTCTTSCCSCCHHHHHHHHHHTTEEEEEEEEECCTTCCSTTHHHHHHHHHHHHHTTSCCSSEEEEEEEC
T ss_pred CCEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE
T ss_conf 92538757788999987610329999999980895599989999999997899999999999999734850206578987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~el~~~~~~~~~~~~Gv~~~k~f~~~~~~~~~~~~l~~~l~~~~~~g~~v~~H~Ed~~~~~~~~~~~~~~ 160 (384)
T d2fvka2 81 FQIEKPSVEARELLDVQLQAAYNDYGVSSVKMFMTYPGLQISDYDIMSAMYATRKNGFTTMLHAENGDMVKWMIEALEEQ 160 (384)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHCCCEEEEESSSTTTBCCHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHT
T ss_pred ECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHC
T ss_conf 57787661277877678888705575441213325522344779999999999754982451322078898887777655
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 g~~~~~~~~~~rP~~aE~~av~r~~~la~~~g~~lhi~HiSt~~~ve~I~~ak~~G~~Vt~Et~ph~L~l~~~~~~~~~~ 240 (384)
T d2fvka2 161 GLTDAYYHGVSRPSIVEGEATNRAITLATTMDTPILFVHVSSPQAAEVIKQAQTKGLKVYAETCPQYALLSDAITRCHHH 240 (384)
T ss_dssp TCCSTTHHHHTSCHHHHHHHHHHHHHHHHHTTCCEEECSCCCHHHHHHHHHHHHHTCCEEEEECHHHHHCCGGGGSCC--
T ss_pred CCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEECHHHHHCCCHHHCCCCC
T ss_conf 98774332454453213678999999887519607722335612367899853049978998376776146301024442
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~~~k~~PPLR~~~dr~aL~~~l~dG~Id~IaSDHaP~~~~eK~~~~~~~~~ 320 (384)
T d2fvka2 241 GEVESYGVGIDLSSISESPFTNPDDRFIGSKYICSPPIRPEGTQKSIWKGMNNGTFTIVGSDHCSYNYYEKTSTASKHRA 320 (384)
T ss_dssp ------CCSCCGGGSSSSTTTCTTCTTGGGGGCCSSCCCCTTSHHHHHHHHHHTSCSEECCCBCCCBSSCCSSTTBGGGG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHCCCCCCCCC
T ss_conf 22111223333222122223554310137516976999987789999977447964279627888788883355333333
Q ss_pred ---------------------------------------------------------------E
Q ss_conf ---------------------------------------------------------------8
Q 002647 518 ---------------------------------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------------------------------a 518 (897)
+
T Consensus 321 ~~~~~~~~~df~~ap~G~~gle~~lpll~~~~v~~~~~~sl~~lv~~~s~nPAki~Gl~p~KGs 384 (384)
T d2fvka2 321 FDPENNKNGEFRYIPNGLPGVCTRMPLLYDYGYLRGNLTSMMKLVEIQCTNPAKVYGMYPQKGS 384 (384)
T ss_dssp EEGGGTEESCGGGSCCCBCCTTTHHHHHHHHTTTTTSSSCHHHHHHHHTHHHHHHTTCTTTSSS
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 3433345676310999974599899999999986489899999999996999999499998998
|
| >d1bs0a_ c.67.1.4 (A:) PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=28885.57 Aligned_cols=1 Identities=100% Similarity=2.131 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~i~~~g~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~G~~~~~sr~~~g 80 (383)
T d1bs0a_ 1 SWQEKINAALDARRAADALRRRYPVAQGAGRWLVADDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSG 80 (383)
T ss_dssp CHHHHHHHHHHHCCGGGCCCCCCCCSBCSSSEEEETTEEEEECSCCCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTC
T ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 95799999999999819971112457888876998996899987653026678989999999999983898876553467
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~lE~~LA~~~g~e~al~~~SG~~an~~~i~al~~~~d~v~~d~~~h~si~~g~~~~~~~~~~~~hnd~~~le~~ 160 (383)
T d1bs0a_ 81 YSVVHQALEEELAEWLGYSRALLFISGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAHNDVTHLARL 160 (383)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECTTCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHCCCCCCCCCEEECCHHHHHHHHH
T ss_conf 40689999999987519983588604422467778760699866885045528776342357875257340578899998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 l~~~~~~~~~vv~e~v~s~~G~i~pl~~l~~l~~~~~~~livDeah~~gv~G~~g~G~~~~~~~~~~~~~~t~~ka~g~~ 240 (383)
T d1bs0a_ 161 LASPCPGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVS 240 (383)
T ss_dssp HHSCCSSCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTSSC
T ss_pred HCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 41457774499965787877723315679999886491998303123210377664558771774211245212233465
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 Gg~v~~~~~~~~~l~~~~~~~~~s~~~~p~~~aa~~~a~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~g~~~~~~~s~Ii 320 (383)
T d1bs0a_ 241 GAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPFTLADSCSAIQ 320 (383)
T ss_dssp CEEEEECHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSSCEECSCCSSBC
T ss_pred CCCCCCCHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE
T ss_conf 54200321677899860446664244320689999999999985025788888888899998788755986579998879
Q ss_pred --------------------------------------------------------------E
Q ss_conf --------------------------------------------------------------8
Q 002647 518 --------------------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------------------a 518 (897)
|
T Consensus 321 ~v~~g~~~~a~~~~~~L~~~Gi~v~~~~~PtVp~g~~~lRi~~~a~ht~edid~l~~~L~~~g 383 (383)
T d1bs0a_ 321 PLIVGDNSRALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGNG 383 (383)
T ss_dssp CEEEESHHHHHHHHHHHHHTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHHC
T ss_pred EEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCC
T ss_conf 999799999999999999789149897489789998459998677799999999999998649
|
| >d1vz6a_ d.154.1.2 (A:) Glutamate N-acetyltransferase 2 (ornithine acetyltransferase) {Streptomyces clavuligerus [TaxId: 1901]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: DmpA/ArgJ-like superfamily: DmpA/ArgJ-like family: ArgJ-like domain: Glutamate N-acetyltransferase 2 (ornithine acetyltransferase) species: Streptomyces clavuligerus [TaxId: 1901]
Probab=100.00 E-value=0 Score=28884.72 Aligned_cols=1 Identities=0% Similarity=-0.327 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 sPkGf~~~~~~aGiK~~~r~DL~li~~~~~~~~AgvFT~N~~~AApV~~~r~~l~~~~~ravvvNSGnANA~TG~~G~~~ 80 (383)
T d1vz6a_ 1 TPRGFVVHTAPVGLADDGRDDFTVLASTAPATVSAVFTRSRFAGPSVVLCREAVADGQARGVVVLARNANVATGLEGEEN 80 (383)
T ss_dssp CCTTEEEEEECCCSSTTCCCCEEEEEESSCCEEEEEECCCTTCCHHHHHHHHHTTTSBCCEEEEEEEECCCSCHHHHHHH
T ss_pred CCCCEEEEEEEECCCCCCCCCEEEEEECCCCEEEEEECCCCCEECCCHHHHHHHCCCCCEEEEEECCCHHHHCCHHHHHH
T ss_conf 99859999999536679998689999579976999973687530151998987526884299995374111115888999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 a~~~~~~~A~~l~i~~~~Vl~aSTGVIG~~Lp~~kI~~~i~~l~~~l~~~~~~~AA~AImTTDt~pK~~~i~~~~~~i~G 160 (383)
T d1vz6a_ 81 AREVREAVARALGLPEGEMLIASTGVIGRQYPMESIREHLKTLEWPAGEGGFDRAARAIMTTDTRPKEVRVSVGGATLVG 160 (383)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEEEESSCCCCHHHHHHHHTTCCCCSSSBCHHHHHHHTCSSCSSCEEEEEEETTEEEEE
T ss_pred HHHHHHHHHHHCCCCCCCEEEECCCHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCEEEE
T ss_conf 99999876553045753145512420101464113344332112232343366544453066420258999720424777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 iaKGsGMI~PnMATML~fi~TDa~i~~~~L~~~l~~~v~~sFN~ItVDGDtSTNDtv~~lAnG~~~~~~~~~f~~aL~~v 240 (383)
T d1vz6a_ 161 IAKGVGMLEPDMATLLTFFATDARLDPAEQDRLFRRVMDRTFNAVSIDTDTSTSDTAVLFANGLAGEVDAGEFEEALHTA 240 (383)
T ss_dssp EEECSSSCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHTGGGBCSSSCCCSSCEEEEEEEEEEEECCHHHHHHHHHHH
T ss_pred EEECCHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHH
T ss_conf 86014320555452478999615567688999999864145000654588887758999845875321078777778899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~LA~~Iv~DGEGATK~i~v~V~gA~s~~dA~~iAr~ia~S~LVKtA~~G~DpNWGRI~aAiG~~~~~~~~d~~~i~i~ 320 (383)
T d1vz6a_ 241 ALALVKDIASDGEGAAKLIEVQVTGARDDAQAKRVGKTVVNSPLVKTAVHGCDPNWGRVAMAIGKCSDDTDIDQERVTIR 320 (383)
T ss_dssp HHHHHHHHHHTCTTCSSEEEEEEEEESSHHHHHHHHHHHHTCHHHHHHHHTTCCCHHHHHHHHHTCTTCTTCCTTTCEEE
T ss_pred HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHEEEE
T ss_conf 99999998636533225899998058999999999999752299998873458847777766423567766662425999
Q ss_pred --------------------------------------------------------------E
Q ss_conf --------------------------------------------------------------8
Q 002647 518 --------------------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~v~~~g~~~~~~~~~~~~~~~~~m~~~ei~I~vdL~~G~~~~~~wtcDLt~~YV~INad 383 (383)
T d1vz6a_ 321 FGEVEVYPPKARGDQADDALRAAVAEHLRGDEVVIGIDLAIADGAFTVYGCDLTEGYVRLNSE 383 (383)
T ss_dssp ETTEEEECC-------CHHHHHHHHHHTTSSEEEEEEECCSSSEEEEEEEECCCHHHHHHHHC
T ss_pred ECCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEECCCCCCHHCCCCC
T ss_conf 899999963667887733559999987457848999997888922899907698322102689
|
| >d1u7ga_ f.44.1.1 (A:) Ammonium transporter AmtB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Ammonium transporter superfamily: Ammonium transporter family: Ammonium transporter domain: Ammonium transporter AmtB species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=28884.13 Aligned_cols=1 Identities=0% Similarity=-1.290 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~d~~d~~~~l~~~~lV~~m~~~Gf~lle~G~vr~kn~~~~~~k~~~~~~~~~i~~~~~Gy~lafg~~~~~~g~~~~~~ 80 (383)
T d1u7ga_ 1 AVADKADNAFMMICTALVLFMTIPGIALFYGGLIRGKNVLSMLTQVTVTFALVCILWVVYGYSLASGEGNNFFGNINWLM 80 (383)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTTHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHSSCSSSCCCSTTGG
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHH
T ss_conf 97576459999999999999999999998611144889999999999999999886034867868489988677750542
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~fq~~Fa~~a~~IvsGavaeR~~~~~~~i~~~~~~~~vy~~~~hwvw~~g~l~~lG~~Dfa 160 (383)
T d1u7ga_ 81 LKNIELTAVMGSIYQYIHVAFQGSFACITVGLIVGALAERIRFPAVLIFVVVWLTLSYIPIAHMVWGGGLLASHGALDFA 160 (383)
T ss_dssp GTTCCTTCEETTEEHHHHHHHHHHHHHHHHHHHHHHHGGGBCHHHHHHHHHHHHHHTHHHHHHHHHSSCHHHHHTCCCSS
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHCCCHHHHEECCCCCCCCCCCEECC
T ss_conf 15765321222211567757633133310231103334665026753045676502156587420488753357863016
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 Gs~vVH~~gG~~aL~~~~~lgpR~~~~~~~~~~~~~~~~~lG~~iLw~gW~gFN~gs~~~~~~~~~~~~~nt~~a~a~~~ 240 (383)
T d1u7ga_ 161 GGTVVHINAAIAGLVGAYLIGKRVGFGKEAFKPHNLPMVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAI 240 (383)
T ss_dssp CTTTTHHHHHHHHHHHHHHSCCCCCTTCSSCCGGGHHHHHHHHHHHHHHHHHHHHGGGSSSSHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 74366404209899888753875445656565678146667899999999873445435520588999998776788999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~k~~~~~~~nG~LaGLVaita~~~~v~p~~A~~iG~i~g~i~~~~~~~l~~~~~iDD~~~~~~vHg~~G 320 (383)
T d1u7ga_ 241 LGWIFGEWALRGLPSLLGACSGAIAGLVGVTPACGYIGVGGALIIGVVAGLAGLWGVTMLKRLLRVDDPCDVFGVHGVCG 320 (383)
T ss_dssp HHHHHHHHHHHSSCCHHHHHHHHHHHHHHHTTTTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHCSCCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEEHHHHH
T ss_conf 99999998735987799999886545540246755346156899886210778899999986601366465670321368
Q ss_pred --------------------------------------------------------------E
Q ss_conf --------------------------------------------------------------8
Q 002647 518 --------------------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------------------a 518 (897)
.
T Consensus 321 i~G~l~~glfa~~~~~g~~~~~~~~~~~ql~~Ql~g~~v~~~~~~~~~~ii~~il~~~~gLRV 383 (383)
T d1u7ga_ 321 IVGCIMTGIFAASSLGGVGFAEGVTMGHQLLVQLESIAITIVWSGVVAFIGYKLADLTVGLRV 383 (383)
T ss_dssp HHHHHHHHHHTSGGGTCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSBC
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 999988998267444665654541268999999999999999999999999999984728769
|
| >d1mhyb_ a.25.1.2 (B:) Methane monooxygenase hydrolase beta subunit {Methylosinus trichosporium [TaxId: 426]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Ferritin-like superfamily: Ferritin-like family: Ribonucleotide reductase-like domain: Methane monooxygenase hydrolase beta subunit species: Methylosinus trichosporium [TaxId: 426]
Probab=100.00 E-value=0 Score=28881.94 Aligned_cols=1 Identities=0% Similarity=-0.427 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~~~~~~~~~~~~~~~p~~~~~~~r~~~~f~~p~~rr~seYE~vt~~~Qp~p~~~~~~~~~~~W~~~f~~G~~~y~~~~ 80 (383)
T d1mhyb_ 1 KRGLTDPERAAIIAAAVPDHALDTQRKYHYFIQPRWKPLSEYEQLSCYAQPNPDWIAGGLDWGDWTQKFHGGRPSWGNES 80 (383)
T ss_dssp CCTTTCHHHHHHHHHHSCSSCSCCCCSTTTTSCCSSSSCCHHHHHHTTCSCCBTTSTTCCBCSCCSSCCTTCCCSSCGGG
T ss_pred CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHCCCCCCCCCCEEECCCCCCCCCCC
T ss_conf 99999745888998616788666677656657868789554444202677985651355654783042079999987553
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 Tai~~~DW~afrDP~q~~yr~Yv~~qaeqe~~v~~~~d~~~~~~~~~~l~p~w~~~~L~~~l~p~r~~E~ga~m~~a~i~ 160 (383)
T d1mhyb_ 81 TELRTTDWYRHRDPARRWHHPYVKDKSEEARYTQRFLAAYSSEGSIRTIDPYWRDEILNKYFGALLYSEYGLFNAHSSVG 160 (383)
T ss_dssp CSCCCSCTTCCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGSCHHHHHTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 00143663654580088899999989999999999999999669620089999999999986131089999998889998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 r~a~~~~i~n~~~fqa~DeLR~aQ~l~~~~~~L~~~~~gf~~~~~~~k~~W~~dp~WQ~~R~~vE~~lva~~Dw~E~~vA 240 (383)
T d1mhyb_ 161 RDCLSDTIRQTAVFAALDKVDNAQMIQMERLFIAKLVPGFDASTDVPKKIWTTDPIYSGARATVQEIWQGVQDWNEILWA 240 (383)
T ss_dssp HHCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCCSHHHHHHHHHCGGGHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 64675899999999988788899999999999877468987056899889844886899999999887317659999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~NlV~e~ll~~L~~~~f~~~~Aa~nGD~~t~~l~~s~q~D~~R~~~w~~alvk~~l~~d~e~~~~Nr~~lq~Wi~~W~~~ 320 (383)
T d1mhyb_ 241 GHAVYDATFGQFARREFFQRLATVYGDTLTPFFTAQSQTYFQTTRGAIDDLFVYCLANDSEFGAHNRTFLNAWTEHYLAS 320 (383)
T ss_dssp HHHTHHHHHHHHHHTTTHHHHHTTTTCSSHHHHHHHHHHHHHHHHHHHHHHHCCCCCTCTTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 98879986589999999999999759705699999999899999999999999998469522155899999999999999
Q ss_pred --------------------------------------------------------------E
Q ss_conf --------------------------------------------------------------8
Q 002647 518 --------------------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------------------a 518 (897)
-
T Consensus 321 a~~A~~~l~pi~~~~p~~~~~~~~~~~~~a~~rv~~~~~~~~a~~i~~~~~~~~~~~~~~~~~ 383 (383)
T d1mhyb_ 321 SVAALKDFVGLYAKVEKVAGATDSAGVSEALQRVFGDWKIDYADKIGFRVDVDQKVDAVLAGY 383 (383)
T ss_dssp HHHHHHHHGGGGGGSCCCTTTTSHHHHHHHHHHHHHHHHHHTHHHHTCCCCHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
T ss_conf 999999867876047754431105789999999999885433154176546999999986469
|
| >d1bo1a_ d.143.1.2 (A:) Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: SAICAR synthase-like superfamily: SAICAR synthase-like family: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta domain: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28879.75 Aligned_cols=1 Identities=0% Similarity=0.537 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
|
T Consensus 1 ~~~r~~~~l~~~~~~Gi~~sv~~l~~~~~~~~L~~~dF~~~~k~~~~~~~~~~~~~~~~fkfk~Y~P~vF~~lR~~fgi~ 80 (383)
T d1bo1a_ 1 KLFRASEPILSVLMWGVNHTINELSNVPVPVMLMPDDFKAYSKIKVDNHLFNKENLPSRFKFKEYCPMVFRNLRERFGID 80 (383)
T ss_dssp CCCCCSSHHHHHHHHHHHHHHHHHTTSCCCSSCCGGGGTCEEEEEEECBSSSCSSSCSEEEEEEECHHHHHHHHHHTTCC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECHHHHHHHHHHCCCC
T ss_conf 94410238999999737988875228996000371003445897347777886779887079983799999999981989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~dy~~Sl~~~~~~~~~s~GkSGs~F~~t~D~rfiiKti~~~E~~~l~~~l~~Y~~h~~~~n~~TLL~k~~Gly~i~~~~ 160 (383)
T d1bo1a_ 81 DQDYQNSVTRSAPINSDSQGRCGTRFLTTYDRRFVIKTVSSEDVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTVDG 160 (383)
T ss_dssp HHHHHHHHHSSCCEECCCC----CCEEECTTSSEEEECCCHHHHHHHHHHHHHHHHHHHTTTTCCSSCCEEEEEEEEETT
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEEEEECC
T ss_conf 89999972788654345657767867880699689998579999999999899999998607875787634303787479
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~lKD~df~~~~~~i~l~~~~k~~l~~ql~~D~~fL~~ 240 (383)
T d1bo1a_ 161 VETYMVVTRNVFSHRLTVHRKYDLKGSTVAREASDKEKAKDLPTFKDNDFLNEGQKLHVGEESKKNFLEKLKRDVEFLAQ 240 (383)
T ss_dssp EEEEEEEEECSSCSSSCCSEEEEECCCSSSSCSCSGGGSSSCCEECHHHHHHTTCCCCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHH
T ss_conf 52799998424567765103676158632567675334555204656778764688230799999999999999999987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~imDYSLLvGIh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (383)
T d1bo1a_ 241 LKIMDYSLLVGIHDVDRAEQEEMEVEERAEDEECENDGVGGNLLCSYGTPPDSPGNLLSFPRFFGPGEFDPSVDVYAMKS 320 (383)
T ss_dssp HTCCSCCEEEEEEEHHHHHHHHHHHHHHTTTTC-----------------------------------CCSCCTTTSTTE
T ss_pred CCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 78675043675512211112211001124555444555564322345789788302221553346644577765445445
Q ss_pred --------------------------------------------------------------E
Q ss_conf --------------------------------------------------------------8
Q 002647 518 --------------------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~~vyyiGIIDiLq~Y~~~KklE~~~Ksl~~~~g~~IS~v~P~~Ya~RF~~Fi~~I~~ 383 (383)
T d1bo1a_ 321 HESSPKKEVYFMAIIDILTPYDTKKKAAHAAKTVKHGAGAEISTVNPEQYSKRFNEFMSNILT 383 (383)
T ss_dssp EECSSTTEEEEEEECCSCC------------------CCCSSSCCCHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 678997599999999715779689999999999211889896127989999999999998649
|
| >d1imva_ e.1.1.1 (A:) Pigment epithelium-derived factor, PEDF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Serpins superfamily: Serpins family: Serpins domain: Pigment epithelium-derived factor, PEDF species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28877.32 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~F~~~L~~~l~~~~~~~Niv~SP~si~~~L~~l~~Ga~g~T~~el~~~L~~~~~~~ 80 (383)
T d1imva_ 1 TGALVEEEDPFFKVPVNKLAAAVSNFGYDLYRVRSSMSPTTNVLLSPLSVATALSALSLGADERTESIIHRALYYDLISS 80 (383)
T ss_dssp CCCCCCCCSHHHHSHHHHHHHHHHHHHHHHHHHHHHHCTTSCEEECHHHHHHHHHHHGGGCCHHHHHHHHHHTTGGGCCC
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCH
T ss_conf 99866554754458289999999999999999985129698199888999999999998647399999999738999984
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~l~~~~~~~~~~l~~~n~i~v~~~~~~~~~f~~~~~~~y~~~~~~~~~~~~~~~~~IN~wv~~~T~g~I~~~ 160 (383)
T d1imva_ 81 PDIHGTYKELLDTVTAPQKNLKSASRIVFEKKLRIKSSFVAPLEKSYGTRPRVLTGNPRLDLQEINNWVQAQMKGKLARS 160 (383)
T ss_dssp SCHHHHHHHHHHHHTSTTSCEEEEEEEEECTTCCCCHHHHHHHHHHHCCCCEECCSCHHHHHHHHHHHHHHHTTTCSCCC
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 89999999998750067763677877886168741668888887623764664354479999999999985075620364
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~t~~~lvna~~fk~~W~~~F~~~~t~~~~F~~~~~~~~~V~mM~~~~~~~~~~~~~~~~~~vv~lp~~~~~sm~ 240 (383)
T d1imva_ 161 TKEIPDEISILLLGVAHFKGQWVTKFDSRKTSLEDFYLDEERTVRVPMMSDPKAVLRYGLDSDLSCKIAQLPLTGSMSII 240 (383)
T ss_dssp CSCCCSSCSEEEEEEEEEECCEEECCCGGGCEEEEEESSSSCEEEEEEEEEEEEEEEEEEETTTTEEEEEEEETTTEEEE
T ss_pred CCCCCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCEEEEEEECCCCEEEE
T ss_conf 33438665124311104423202556533454464234798479830211245514566516655389994137973899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 iiLP~~~~~~l~~l~~~l~~~~l~~~~~~~~~~~v~v~lPkF~i~~~~dL~~~L~~lGl~~~F~~adfs~is~~~l~vs~ 320 (383)
T d1imva_ 241 FFLPLKVTQNLTLIEESLTSEFIHDIDRELKTVQAVLTVPKLKLSYEGEVTKSLQEMKLQSLFDSPDFSKITGKPIKLTQ 320 (383)
T ss_dssp EEEESSCCSCCHHHHTTCCHHHHHHHHHHCEEEEEEEEEECEEEEEEEECHHHHHTTTTTHHHHSCCCTTTCSSCCCEEE
T ss_pred EEEECCCCCCHHHHHHHCCHHHHHHHHHHCCCEEEEEEECEEEEEEECCHHHHHHHCCHHHHCCCCCCCCCCCCCCEEEE
T ss_conf 99962667886787664068899998750642279995021887540246675431343330345674556799947445
Q ss_pred --------------------------------------------------------------E
Q ss_conf --------------------------------------------------------------8
Q 002647 518 --------------------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------------------a 518 (897)
-
T Consensus 321 v~hka~ieVdE~G~~a~a~t~~~~~~~~~~~~f~~drPF~f~I~~~~t~~iLF~G~v~~P~~~ 383 (383)
T d1imva_ 321 VEHRAGFEWNEDGAGTTPSPGLQPAHLTFPLDYHLNQPFIFVLRDTDTGALLFIGKILDPRGP 383 (383)
T ss_dssp EEEEEEEEECSCEEECC--------CCCCCCEEECCSCEEEEEEETTTCCEEEEEEESCTTCC
T ss_pred EEEEEEEEECCCCCCCCCCCCEECCCCCCCCEEEECCCEEEEEEECCCCCEEEEEEECCCCCC
T ss_conf 789999999888611132222101567899679911999999999999968999995289997
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=100.00 E-value=0 Score=28876.18 Aligned_cols=1 Identities=0% Similarity=0.105 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d 80 (383)
T d1gy8a_ 1 SHMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRN 80 (383)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCC
T ss_conf 96979995787689999999999828998999826876555300133566677776541133332235541799784568
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 160 (383)
T d1gy8a_ 81 EDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNA 160 (383)
T ss_dssp HHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CC
T ss_pred HHHHHHHHHCCCEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 78866666224012043232443222223222233134554442232001110477533333332222334433222222
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~ 240 (383)
T d1gy8a_ 161 EPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQ 240 (383)
T ss_dssp CCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 22123357899988886676799999999998599779971230515676666555666510027999999986103454
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el~~~ 320 (383)
T d1gy8a_ 241 RLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEV 320 (383)
T ss_dssp ----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHH
T ss_pred CCHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEHHHHHHH
T ss_conf 20123333037835873785546899747856888999999999986402221111346753899689996359999999
Q ss_pred --------------------------------------------------------------E
Q ss_conf --------------------------------------------------------------8
Q 002647 518 --------------------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------------------a 518 (897)
+
T Consensus 321 i~~~~~~~~~~~~~~~~~~d~~~~~~d~~k~~k~LGw~P~~~l~e~i~~t~~~w~~~~~~~~~ 383 (383)
T d1gy8a_ 321 ARKTTGHPIPVRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTHPNGYA 383 (383)
T ss_dssp HHHHHCCCCCEEEECCCTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTCTTTTC
T ss_pred HHHHHCCCCCEEECCCCCCCCCEEEECHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCC
T ss_conf 999869997648899999986785357899999879966787999999999999986800489
|
| >d2ayna1 d.3.1.9 (A:100-482) Ubiquitin carboxyl-terminal hydrolase 14 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Cysteine proteinases superfamily: Cysteine proteinases family: Ubiquitin carboxyl-terminal hydrolase, UCH domain: Ubiquitin carboxyl-terminal hydrolase 14 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28874.08 Aligned_cols=1 Identities=0% Similarity=-0.891 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~P~GL~N~GNtCY~NSvLQ~L~~ip~~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~~l~~~~~~~~p~~~~~~l~ 80 (383)
T d2ayna1 1 MELPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMDKTSSSIPPIILLQFLH 80 (383)
T ss_dssp CCCCCEECCCSSCHHHHHHHHHHHTCHHHHHHHHTCCCCC------CHHHHHHHHHHHHHHHHHHHCSEECCHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
T ss_conf 98995858898406999999999766999999985145315777645277999999999999865898457799999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~QqDa~Ef~~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~i~~lF~g~~~~~~~c~~c 160 (383)
T d2ayna1 81 MAFPQFAEKGEQGQYLQQDANECWIQMMRVLQQKLEAIEDDSVKETDSSSASAATPSKKKSLIDQFFGVEFETTMKCTES 160 (383)
T ss_dssp HHCGGGGCBCTTSCBCCCCHHHHHHHHHHHHHTTSCCCCCC------------------CCHHHHHTCEEEEEEEEESSS
T ss_pred HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCEEEEEEEEEEEEEEEECCC
T ss_conf 97376502555672245439999998788999998753203644211101211124667872054022899988883578
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~l~L~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~lP~~L~i~l~R~~~~~~~~~~ 240 (383)
T d2ayna1 161 EEEEVTKGKENQLQLSCFINQEVKYLFTGLKLRLQEEITKQSPTLQRNALYIKSSKISRLPAYLTIQMVRFFYKEKESVN 240 (383)
T ss_dssp CCCCCBCCEEEESSEEEECSSSCCBHHHHHHHTTEECCCCEETTTTEECCEEEEEEEEECCSSEEEEEECBCCCCSSSSC
T ss_pred CCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCEEECCCCCCE
T ss_conf 96551002231323210221010013456665201100124532376401202346502341453410220120567621
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~K~~~~v~fp~~ldl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~L 320 (383)
T d2ayna1 241 AKVLKDVKFPLMLDMYELCTPELQEKMVSFRSKFKDLEDKKVNQQPNTSDKKSSPQKEVKYEPFSFADDIGSNNCGYYDL 320 (383)
T ss_dssp CBCCCCCBCCSEEECGGGBCHHHHHHTTTTTGGGTCTTC----------------------CCCCCSCTTTTCCCSEEEE
T ss_pred EECCCEECCCCEEECHHHCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 33584774687664432146033013321024554432211013667554434542222236533344446789951999
Q ss_pred --------------------------------------------------------------E
Q ss_conf --------------------------------------------------------------8
Q 002647 518 --------------------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~avi~H~G~s~~~GHY~a~vk~~~~~W~~~nD~~V~~v~~~~v~~~~~~~~~~~aYiLfY~r~ 383 (383)
T d2ayna1 321 QAVLTHQGRSSSSGHYVSWVKRKQDEWIKFDDDKVSIVTPEDILRLSGGGDWHIAYVLLYGPR 383 (383)
T ss_dssp EEEEEEESSSTTSSEEEEEEEEETTEEEEEBTTBCCCBCHHHHGGGGSSSSSCEEEEEEEECC
T ss_pred EEEEEEECCCCCCCCCEEEEECCCCEEEEEECCCEEEECHHHHHHHHCCCCCCCEEEEEEEEC
T ss_conf 999999789999977089999999928999899508937999977527998893699999879
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28879.09 Aligned_cols=1 Identities=0% Similarity=-0.460 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 DViVIGaG~aGL~aA~~L~~~G~~V~VlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~~~~~~~ 80 (383)
T d2v5za1 1 DVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQNRILRLAKELGLETYKVNEV 80 (383)
T ss_dssp SEEEECCBHHHHHHHHHHHHTTCCEEEEESSSSSBTTCCEECCTTTSCEESSCCEECTTCHHHHHHHHHTTCCEEECCCS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCEEECCCEEECCCCHHHHHHHHHCCCCCEECCCC
T ss_conf 98998978899999999986899789993499874506688778982895776696798769999999859962222676
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (383)
T d2v5za1 81 ERLIHHVKGKSYPFRGPFPPVWNPITYLDHNNFWRTMDDMGREIPSDAPWKAPLAEEWDNMTMKELLDKLCWTESAKQLA 160 (383)
T ss_dssp SEEEEEETTEEEEECSSSCCCCSHHHHHHHHHHHHHHHHHHTTSCTTCGGGSTTHHHHHTSBHHHHHHHHCSSHHHHHHH
T ss_pred CCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 63477347643223444200011444554899999999866430011321013455544667999998704626778888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~i~~~~~v~~I~~~~~~v 240 (383)
T d2v5za1 161 TLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSGQVSERIMDLLGDRVKLERPVIYIDQTRENV 240 (383)
T ss_dssp HHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTCTHHHHHHHHHHHGGGEEESCCEEEEECSSSSE
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCEEEECCCCEEEEECCCEE
T ss_conf 87654220246302467889999886132212333246762133144154999999987598499368606899609969
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~v~~~~g~~~~ad~vI~a~p~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~g~~~ 320 (383)
T d2v5za1 241 LVETLNHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVFPPGILTQYGRVLRQPVDRIYFAGTETATHWSGYME 320 (383)
T ss_dssp EEEETTSCEEEESEEEECSCGGGGGGSEEESCCCHHHHHHTTSCCCTTHHHHHGGGTTCCBTTEEECSGGGCSSSTTSHH
T ss_pred EEEECCCCEEECCEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEECCCCCCCCCCCCHH
T ss_conf 99988997898799998989899951824899999999999975447754401354408768668556653466775067
Q ss_pred --------------------------------------------------------------E
Q ss_conf --------------------------------------------------------------8
Q 002647 518 --------------------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------------------a 518 (897)
-
T Consensus 321 ga~~~g~~~a~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~P~~p~~~~~i~~~~ 383 (383)
T d2v5za1 321 GAVEAGERAAREILHAMGKIPEDEIWQSEPESVDVPAQPITTTFLERHLPSVPGLLRLIGLTT 383 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCGGGSSCCCCCCSSSCCCCCCCCHHHHHCCCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC
T ss_conf 899987999999999862588044302484224655454545605224999987403167779
|
| >d1t1ua1 c.43.1.3 (A:20-401) Choline O-acetyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-dependent acyltransferases superfamily: CoA-dependent acyltransferases family: Choline/Carnitine O-acyltransferase domain: Choline O-acetyltransferase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=0 Score=28802.44 Aligned_cols=1 Identities=0% Similarity=-1.324 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 e~~LP~LPvP~L~~Tl~ryL~s~~Pl~s~ee~~~t~~~v~~F~~~~g~G~~Lq~~L~~~~~~~~nwl~~~W~~~~YL~~R 80 (382)
T d1t1ua1 1 ELDLPKLPVPPLQQTLATYLQCMQHLVPEEQFRKSQAIVKRFGAPGGLGETLQEKLLERQEKTANWVSEYWLNDMYLNNR 80 (382)
T ss_dssp CTTSCCCCCCCHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHHSSSTTHHHHHHHHTTTCC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC
T ss_conf 99998899999999999999985445999999999999999751698179999999987446878607778765016788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~pL~~~~n~~~~~~~~~~~~~~~q~~rAA~l~~~~l~f~~~l~~~~l~~~~~~~~~~~~plcM~qy~~lF~t~RiP~~~~ 160 (382)
T d1t1ua1 81 LALPVNSSPAVIFARQHFQDTNDQLRFAACLISGVLSYKTLLDSHSLPTDWAKGQLSGQPLCMKQYYRLFSSYRLPGHTQ 160 (382)
T ss_dssp SCHHHHTCCEEEECCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHTCSCCTTSSSCCSSSCCCCTTGGGTTTEEEECCSSS
T ss_pred CCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHHHHCCCEECCCCCC
T ss_conf 78650056612105666876037999999999999999999756656861210224898667899998728670568998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 D~l~~~~~~~~~~~~HIvVl~~g~~y~v~v~~~~~~l~~~ei~~~l~~I~~~~~~~~~~~~~ig~LT~~~Rd~Wa~~r~~ 240 (382)
T d1t1ua1 161 DTLVAQKSSIMPEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAKARTV 240 (382)
T ss_dssp CEEEECCCSSSSCCCEEEEEETTEEEEEESEETTEECCHHHHHHHHHHHHHHHTCSTTCCCCGGGGGGSCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCCEEEEEECCEEEEEEEEECCEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 74665576778898779999899899999998990688999999999999624455556888450555871999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 L~~~~~N~~~L~~Ie~alfvv~LDd~~~~~~~e~~~~~~~l~g~~~~~~~~NRW~DKslq~IV~~nG~~g~~~EHS~~DG 320 (382)
T d1t1ua1 241 LLKDSTNRDSLDMIERCICLVCLDGPGTGELSDTHRALQLLHGGGCSLNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDG 320 (382)
T ss_dssp HTTSHHHHHHHHHHHTCSCEEEECCCCSSCCCHHHHHHHHHHTTSTTTTTTSCCTTBSEEEEECTTSCEEEEECSTTCCH
T ss_pred HHCCCCHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCH
T ss_conf 85596158999999866489992799988701689999986178778998610677873799978986898504676249
Q ss_pred -------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------a 518 (897)
.
T Consensus 321 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~L~f~l~~~~~~~I~~a~~~~~~~~~dl 382 (382)
T d1t1ua1 321 IVLVQCTEHLLKHMMTSNKKLVRADSVSELPAPRRLRWKCSPETQGHLASSAEKLQRIVKNL 382 (382)
T ss_dssp HHHHHHHHHHHHHHTCCTTSCSSSCSCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHE
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999998640677888887778999658788658899999999999999997349
|
| >d2bkwa1 c.67.1.3 (A:3-384) Alanine-glyoxylate aminotransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Alanine-glyoxylate aminotransferase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=28800.70 Aligned_cols=1 Identities=0% Similarity=0.537 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
|
T Consensus 1 ~~~~~l~~PGP~~v~~~V~~Am~~~~~~hr~~~f~~~~~~~~~~~r~~~~~~~~~~~~~i~~t~sgT~a~~~~~~~l~~~ 80 (382)
T d2bkwa1 1 KSVDTLLIPGPIILSGAVQKALDVPSLGHTSPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILS 80 (382)
T ss_dssp CCCCEECSSSSCCCCHHHHHTTSCCCCCTTSHHHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCT
T ss_pred CCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHH
T ss_conf 98656427899788799999727326897769999999999999999985334898719999386899999999998876
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~gd~vlv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tg~~~~~~~~~~~ 160 (382)
T d2bkwa1 81 KAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDLKAISQA 160 (382)
T ss_dssp TCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHH
T ss_pred CCCCCCEEEEEECHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHEEEEECCCCCCCCCCCHHHHHH
T ss_conf 07998248997312334434311100133333223677775641579998630110100232112246302441233332
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~vDa~qs~g~~pid~~~~giD~~~~s~~K~l~gP~G~g~l~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (382)
T d2bkwa1 161 IKQTSPETFFVVDAVCSIGCEEFEFDEWGVDFALTASQKAIGAPAGLSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWT 240 (382)
T ss_dssp HHHHCTTSEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSCEEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHH
T ss_pred CCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHH
T ss_conf 01334310256302455322123233557569950566667689750255405999864331035888663011122100
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~Tp~~~~i~al~~aL~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~s~~v~~~~ 320 (382)
T d2bkwa1 241 PIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGLQLTSVSRYPSNMSAHGLTAVY 320 (382)
T ss_dssp HHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTTCCEESSCSSSTTBCSSCEEEE
T ss_pred HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCEEEEC
T ss_conf 23311345556535677577789999999999876324557999999999999764115532234683011587379970
Q ss_pred -------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~~~~L~~~gi~i~~G~~~~~~~~~~Ri~~~G~~~~~e~i~~l~~~l~~i~~~L~~~ 382 (382)
T d2bkwa1 321 VADPPDVIAFLKSHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQRK 382 (382)
T ss_dssp CSCHHHHHHHHHHTTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC-
T ss_pred CCCHHHHHHHHHHCCEEEECCCCHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 89989999999978939977877311699899858868997999999999999999997739
|
| >d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Putative methionine aminotransferase YdbL species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=28802.26 Aligned_cols=1 Identities=0% Similarity=-1.755 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~i~l~~G~Pd~~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~ 80 (382)
T d1u08a_ 1 PLIPQSKLPQLGTTIFTQMSALAQQHQAINLSQGFPDFDGPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLY 80 (382)
T ss_dssp CCCCCCSCCCCCCCHHHHHHHHHHHTTCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHCCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 98824547799986999999996269978854988999778999999999985599889898677999999999999984
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~ 160 (382)
T d1u08a_ 81 GYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLSERT 160 (382)
T ss_dssp SCCCCTTTTEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCCTTE
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHCCCC
T ss_conf 99988772378646358889998751035640599731443213455443133200012214335689999731213574
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~i~l~~P~NPtG~v~~~~~~~~l~~~~~~~~~~ii~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~pG~R 240 (382)
T d1u08a_ 161 RLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWK 240 (382)
T ss_dssp EEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGC
T ss_pred CEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC
T ss_conf 08998798765454565332012332210243202430320210343345542000123468579985035521478665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 iG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~p~gg~~~~~ 320 (382)
T d1u08a_ 241 VGYCVAPAPISAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNESRLEILPCEGTYFLLV 320 (382)
T ss_dssp CEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHTTSSSCEECCCCBSSEEEE
T ss_pred CHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEE
T ss_conf 11010210137888752022323456433322333222206777789999876300002232037857956894679989
Q ss_pred -------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------a 518 (897)
.
T Consensus 321 ~~~~~~~~d~~e~~~~ll~e~gV~v~PG~~F~~~~~~~~~~Ris~~~~~e~l~~al~RL~~l 382 (382)
T d1u08a_ 321 DYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAKKESTLLAAAERLRQL 382 (382)
T ss_dssp ECTTTCCSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCSCHHHHHHHHHHHTTC
T ss_pred ECCCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHCC
T ss_conf 56888999999999999997999998224527899989889999809999999999998179
|
| >d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Bacillus sp., cyclomaltodextrinase [TaxId: 1409]
Probab=100.00 E-value=0 Score=28801.50 Aligned_cols=1 Identities=100% Similarity=1.134 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~p~W~~~~v~Y~i~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~Gd~~gi~~kLdylk~LGv~~i~l~Pi~~~~~~~ 80 (382)
T d1ea9c3 1 FQPPAWVKDAIFYQIFPERFANGDTRNDPEGTLPWGSADPTPSCFFGGDLQGVIDHLDHLSKLGVNAVYFTPLFKATTNH 80 (382)
T ss_dssp CCCCTHHHHCCCCEECSTTSCCCCSCSCSSCCSCCCSSSCCCSSCCCCCHHHHHHTHHHHHHHTCSEEEECCCSSCSSSS
T ss_pred CCCCCCCCCCEEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC
T ss_conf 97986023886999971220379988786676434555777676678189999985699986799889969770178877
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 gY~~~~~~~id~~~Gt~~df~~lv~~~h~~gi~VilD~V~NH~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (382)
T d1ea9c3 81 KYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAVFNHSGRTFPPFVDVLKNGEKSKYKDWFHIRSLPLEVVDGIP 160 (382)
T ss_dssp TTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEECCCSBCCTTTHHHHHHHTTTTTCTTTTSSCBCSSSCCCTTSCC
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 87754453544366777899999999986264378763013441348325556406876544430013464432235763
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~d~n~~~~~v~~~l~~~~~~w~~~~gvDGfR~Da~~~~~~~~~~~~~~~~~~~~p~~~~~~e~~~~~~~ 240 (382)
T d1ea9c3 161 TYDTFAFEPLMPKLNTEHPDVKEYLLKAAEYWIRETGIDGWRLDVANEVSHQFWREFRRVVKQANPDAYILGEVWHESSI 240 (382)
T ss_dssp SBCBSSSCTTSBBCCTTSHHHHHHHHHHHHHHHHHHCCSEEEETTCTTSCHHHHHHHHHHHHHHCTTCEEEECCCSCCTT
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCHHHCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCC
T ss_conf 22233344345742301388999999987515653146678743620076566545666554008981588543145532
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nHD~~r~~~~~~~~~~~~~~a~~ 320 (382)
T d1ea9c3 241 WLEGDQFDAVMNYPFTNAVLDFFIHQIADAEKFSFMLGKQLAGYPRQASEVMFNLLDSHDTARLLTQADGDKRKMKLAVL 320 (382)
T ss_dssp TTTTTSCSEEBCHHHHHHHHHHTTSCCSCHHHHHHHHHHTTTTSCHHHHHTCEECSCCTTSCCHHHHHCSCHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 13676432212343004667655046421567899999999854020654405520367666312246787999999999
Q ss_pred -------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------a 518 (897)
|
T Consensus 321 ~~l~~pG~P~Iy~G~E~g~~~~~~~~~r~~~~w~~~~~~~~l~~~~~~L~~lR~~~paL~~G 382 (382)
T d1ea9c3 321 FQFTYFGTPCIYYGDEVGLDGGHDPGCRKCMEWDETKHDKDLFAFYQTVIRLRQAHAALRTG 382 (382)
T ss_dssp HHTTSSSEECCCSSCSSCCCCCSHHHHTCCCCCCTTSCCHHHHHHHHHHHHHHHHCSHHHHC
T ss_pred HHHHCCCCCEEECCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCC
T ss_conf 99971798787755754888999977648878877765389999999999999568975189
|
| >d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aspartate aminotransferase, AAT species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=28800.83 Aligned_cols=1 Identities=0% Similarity=-2.021 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~r~~~~~~s~~~~i~~~a~~~~~~G~~vi~l~~g~p~~~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~lR~~ia~~ 80 (382)
T d1b5pa_ 1 MRGLSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREALAEK 80 (382)
T ss_dssp CCCCCHHHHHCCCCHHHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 93788999848988899999999999967998289999989999889999999999865886899987889999999764
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 160 (382)
T d1b5pa_ 81 FRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRA 160 (382)
T ss_dssp HHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTT
T ss_pred HHHHCCCCCCCCCCEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHH
T ss_conf 44303411265534056778999999999967997989987998477999999845847998554101458999999973
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G 240 (382)
T d1b5pa_ 161 ITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTG 240 (382)
T ss_dssp CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTTEEEEEESTTTTTCGG
T ss_pred CCCCCEEEEECCCCCCCCHHCCHHHHHHHHHHHHHCCEEEEEECCCCCEECCCCCCCHHHCCCCCEEEEECCHHHCCCCH
T ss_conf 78897699989997976600799999999999998590899976641232178988887818997799946346451807
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 lR~G~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~p~gg 320 (382)
T d1b5pa_ 241 WRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPSGA 320 (382)
T ss_dssp GCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCSBT
T ss_pred HHEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCE
T ss_conf 56699998999999999998750357653222222222233121157899999999862267898876449767568941
Q ss_pred -------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------a 518 (897)
.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~e~gV~v~PG~~F~~~~~iRis~~~~~e~l~~al~rl~~~L 382 (382)
T d1b5pa_ 321 FYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVL 382 (382)
T ss_dssp TEEEEECTTTCSSHHHHHHHHHHTTEECEESGGGTCTTEEEEECCSCHHHHHHHHHHGGGGC
T ss_pred EEEEEECCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHC
T ss_conf 79968578999999999999997897999572258999699997499999999999999869
|
| >d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=100.00 E-value=0 Score=28798.87 Aligned_cols=1 Identities=0% Similarity=-0.460 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (382)
T d1wkva1 1 ALADISGYLDVLDSVRGFSYLENAREVLRSGEARCLGNPRSEPEYVKALYVIGASRIPVGDGCSHTLEELGVFDISVPGE 80 (382)
T ss_dssp CEEEGGGGTTHHHHCCSSTTHHHHHHHHHHTEEECBSSGGGCHHHHHHHHHHTCSEEEBSSSCEEETTTTTTTCCCSCTT
T ss_pred CCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCEECCCCCC
T ss_conf 96421015677775324278999999986035030579975478999999844553556776531166526210489854
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~l~~~~~~~PTPLvrl~l~~~~G~~IylKlE~~NPtGgSfKdR~A~~~i~~A~~~~~~g~~VVeaSSGN~GiAlA 160 (382)
T d1wkva1 81 MVFPSPLDFFERGKPTPLVRSRLQLPNGVRVWLKLEWYNPFSLSVKDRPAVEIISRLSRRVEKGSLVADATSSNFGVALS 160 (382)
T ss_dssp CEESSHHHHHHHSCSCCEEECCCCCSTTEEEEEEEGGGSTTTSBTTHHHHHHHHHHHTTTSCTTCEEEEECCHHHHHHHH
T ss_pred EEECCHHHHHCCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHH
T ss_conf 67579899856899998777877888898999985478999876299999999999985268999999858759999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~aa~lGik~~Iv~P~~~~~~K~~~ira~GAeVi~~~~~~~~~~~~~~a~~~a~~~~~~~~~q~~N~~~~~~h~~ttg~E 240 (382)
T d1wkva1 161 AVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVDPEAPSTVHLLPRVMKDSKNEGFVHVNQFYNDANFEAHMRGTARE 240 (382)
T ss_dssp HHHHHTTCEEEEEEETTSCHHHHHHHHHTTCEEEEETTCSSSGGGHHHHHHHHHHHCCEECCTTTCHHHHHHHHHTHHHH
T ss_pred HHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHCCHHH
T ss_conf 99998499779996200112222222356861154375105679999876520245754332345430232112112178
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 I~eQl~~~~~~~d~vv~~vGtGG~~~Gi~~~lk~~~p~vkiigVep~~~~~i~g~~~i~~g~~~~~~~d~~~~i~~Vsd~ 320 (382)
T d1wkva1 241 IFVQSRRGGLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRAVLVQPAQGDSIPGIRRVETGMLWINMLDISYTLAEVTLE 320 (382)
T ss_dssp HHHHHHHTTCCEEEEEECCSSSHHHHHHHHHHHHHCTTCEEEEEEECTTCCCTTCCCGGGCCSHHHHSCCCCEEEEECHH
T ss_pred HHHHHHCCCCCEEEEEEECCCCCCCCCCEEEHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHH
T ss_conf 99996467873167897416654233320101231876623675244444445641024576575646644299997999
Q ss_pred -------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------a 518 (897)
-
T Consensus 321 Eai~a~r~La~~EGI~vgpSSGaavaaa~k~a~~~~~~~~~vVvIlcD~G~rYlstiyN~~~ 382 (382)
T d1wkva1 321 EAMEAVVEVARSDGLVIGPSGGAAVKALAKKAAEGDLEPGDYVVVVPDTGFKYLSLVQNALE 382 (382)
T ss_dssp HHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHHHTTCSCSEEEEEEECBBGGGCHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHCCCCC
T ss_conf 99999999999819888189999999999998640689998999988897432676426789
|
| >d1xl7a1 c.43.1.3 (A:11-392) Peroxisomal carnitine O-octanoyltransferase, COT {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-dependent acyltransferases superfamily: CoA-dependent acyltransferases family: Choline/Carnitine O-acyltransferase domain: Peroxisomal carnitine O-octanoyltransferase, COT species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=0 Score=28803.60 Aligned_cols=1 Identities=0% Similarity=0.271 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 e~Tf~~q~~LP~LPvP~Le~Tl~ryL~s~~pl~~~~e~~~t~~~v~~F~~~~G~~Lq~~L~e~a~~~~NWl~~~W~~~~Y 80 (382)
T d1xl7a1 1 ERTFQYQDSLPSLPVPALEESLKKYLESVKPFANEDEYKKTEEIVQKFQEGAGKRLHQKLLERARGKRNWLEEWWLNVAY 80 (382)
T ss_dssp CCTTTTGGGCCCCCCCCHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCTTSSHHHHHHHHT
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
T ss_conf 96431427799898999899999999986566999999999999999974939999999998740698850587867753
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 L~~R~pl~~~~n~~~~~~~~~~~~~~~~~~q~~raA~l~~~~~~f~~~l~~~~l~~~~~~~~plcm~qy~~lF~t~RiPg 160 (382)
T d1xl7a1 81 LDVRIPSQLNVNFVGPCPHFEHYWPAREGTQLERGSMMLWHNLNYWQLLRREKLPVHKSGNTPLDMNQFRMLFSTCKVPG 160 (382)
T ss_dssp TSCCSCHHHHTCEEEECGGGGTTCCCCTTCHHHHHHHHHHHHHHHHHHHHTTCSCCCEETTEECCCGGGGGTSSEEEECC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCEEECHHHHHHHCCCEECCC
T ss_conf 25577864555666766556777885500699999999999999998740365471230998760799997612771689
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~D~~~~~~~~~~~~~~~~HIvVl~~g~~ykv~v~~~~~~~s~~el~~~l~~I~~~~~~~~~~~~vg~LTt~~Rd~WA~ 240 (382)
T d1xl7a1 161 ITRDSIMNYFKTESEGHCPTHIAVLCRGRAFVFDVLHEGCLITPPELLRQLTYIHKKCSNEPVGPSIAALTSEERTRWAK 240 (382)
T ss_dssp SSCCEEEECCCCTTTCCCCCEEEEEETTEEEEEESEETTEECCHHHHHHHHHHHHHHHHTSCCCCCGGGGGGSCHHHHHH
T ss_pred CCCCCEEECCCCCCCCCCCCEEEEEECCCEEEEEEEECCEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 98772002355556789886699997893089999329908889999999999997354678887755067656479999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~R~~L~~~~~~N~~~L~~Ie~AlfvvcLD~~~~~~~~e~~~~~~~~~l~G~~~NRW~DKs~q~IV~~nG~~G~~~EHS~~ 320 (382)
T d1xl7a1 241 AREYLISLDPENLTLLEKIQTSLFVYSIEDSSPHATPEEYSQVFEMLLGGDPSVRWGDKSYNLISFANGIFGCCCDHAPY 320 (382)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHSSCEEEECCCCCCCCSSCCHHHHHHHHSSCGGGCCTTBSCEEEECTTSCEEEEECSSSC
T ss_pred HHHHHHHCCHHHHHHHHHHHHCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCH
T ss_conf 99997617842699999987446888613568889858999999963859873327766713899689888987368716
Q ss_pred -------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------a 518 (897)
.
T Consensus 321 DG~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~p~~L~f~l~~~i~~~I~~A~~~~~k~as 382 (382)
T d1xl7a1 321 DAMVMVNIAHYVDERVLETEGRWKGSEKVRDIPLPEELVFTVDEKILNDVSQAKAQHLKAAS 382 (382)
T ss_dssp CTHHHHHHHHHHHHHHHHTTTCCCSCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCC
T ss_conf 69999999999999976127878888887789997577896698999999999999998509
|
| >d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Thermoactinomyces vulgaris, TVAII [TaxId: 2026]
Probab=100.00 E-value=0 Score=28798.83 Aligned_cols=1 Identities=0% Similarity=-0.991 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~P~w~~~~viY~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~gi~~kLdyl~~lGi~~I~l~Pv~~~~~ 80 (382)
T d1wzla3 1 VFTTPEWAKEAVIYQIFPERFANGDPSNDPPGTEQWAKDARPRHDSFYGGDLKGVIDRLPYLEELGVTALYFTPIFASPS 80 (382)
T ss_dssp SCCCCSGGGGCCEEEECGGGTCCCCGGGCCTTCCCCCTTCCCCTTCCCCCCHHHHHHTHHHHHHHTCCEEEECCCEECSS
T ss_pred CCCCCCCCCCCEEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCC
T ss_conf 97998420288799997024137998778766643344566655777785899999831999977997899798677875
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~gY~~~~~~~vd~~~Gt~~d~~~lv~~~H~~Gi~vilD~V~NH~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (382)
T d1wzla3 81 HHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILDAVFNHAGDQFFAFRDVLQKGEQSRYKDWFFIEDFPVSKTSR 160 (382)
T ss_dssp SSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEECCSBCCTTSHHHHHHHHHGGGCTTGGGBCBSSSSCCCSSC
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 45776556320236788788999999999752451576321013333333331001037654246643003654566789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~dLn~~n~~v~~~~~~~~~~w~~~gvDGfR~D~~~~~~~~~~~~~~~~~~~~~p~~~~i~e~~~~~~ 240 (382)
T d1wzla3 161 TNYETFAVQVPAMPKLRTENPEVKEYLFDVARFWMEQGIDGWRLDVANEVDHAFWREFRRLVKSLNPDALIVGEIWHDAS 240 (382)
T ss_dssp CSBCBSSSSCTTCBBBCTTSHHHHHHHHHHHHHHHHTTCCEEEETTGGGSCHHHHHHHHHHHHHHCTTCEEEECCSSCCG
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCCCC
T ss_conf 74444344556678507799999999999999999758875034334335645556789998752884478620035652
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~nHD~~r~~~~~~~~~~~~~~a~ 320 (382)
T d1wzla3 241 GWLMGDQFDSVMNYLFRESVIRFFATGEIHAERFDAELTRARMLYPEQAAQGLWNLLDSHDTERFLTSCGGNEAKFRLAV 320 (382)
T ss_dssp GGCSSSSCSEEBCHHHHHHHHHHHTSCCSCHHHHHHHHHHHHTTSCHHHHTTCEEESCCTTSCCHHHHTTTCHHHHHHHH
T ss_pred HHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHCCCCHHHHHHHH
T ss_conf 02203342023302677899986514764314678888753201643245663123058775536765389799999999
Q ss_pred -------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------a 518 (897)
=
T Consensus 321 ~~llt~pG~P~iy~G~E~g~~g~~~~~~r~~~~W~~~~~~~~l~~~~~~L~~lR~~~paL~r 382 (382)
T d1wzla3 321 LFQMTYLGTPLIYYGDEIGMAGATDPDCLRPMIWEEKEQNRGLFEFYKELIRLRHRLASLTR 382 (382)
T ss_dssp HHHHHSSSEEEEETTGGGTCCCCSTTGGGCCCCCCGGGSCHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHCC
T ss_conf 99998089878973730277899995445788988655570899999999999830986488
|
| >d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Neopullulanase, central domain species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=0 Score=28799.57 Aligned_cols=1 Identities=0% Similarity=-0.426 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~P~w~~~~viY~v~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~gi~~kldyl~~LGv~~i~L~Pi~~~~~ 80 (382)
T d1j0ha3 1 DLFEAPDWVKDTVWYQIFPERFANGNPSISPEGSRPWGSEDPTPTSFFGGDLQGIIDHLDYLVDLGITGIYLTPIFRSPS 80 (382)
T ss_dssp GSCCCCGGGGGCCEEEECGGGTCCSCGGGSCTTCCCTTSSCCCSSCCCCCCHHHHHHTHHHHHHHTCCEEEECCCEECSS
T ss_pred CCCCCCCCHHCCEEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCC
T ss_conf 98899964107779999755312799887766665345557766766785899999867999976998899698876876
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~gy~~~d~~~vd~~~Gt~~~~~~lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (382)
T d1j0ha3 81 NHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLDAVFNHCGYEFAPFQDVWKNGESSKYKDWFHIHEFPLQTEPR 160 (382)
T ss_dssp SSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTCHHHHHHHHHGGGCTTGGGBCBSSSSCCCSSS
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 56877565643278879979999999986423643787752102333344312220368745557742224566545663
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~dln~~n~~vr~~l~~~~~~wi~~~giDGfR~Da~~~~~~~~~~~~~~~~~~~~p~~~~i~e~~~~~~ 240 (382)
T d1j0ha3 161 PNYDTFAFVPQMPKLNTANPEVKRYLLDVATYWIREFDIDGWRLDVANEIDHEFWREFRQEVKALKPDVYILGEIWHDAM 240 (382)
T ss_dssp CSBCBSTTCTTSBBBCTTSHHHHHHHHHHHHHHHHHHCCCEEEETTGGGSCHHHHHHHHHHHHHHCTTCEEEECCSSCCG
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
T ss_conf 23332356777764440769999999998886766441157984453216645534444433202898522343234512
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~nHD~~R~~~~~~~~~~~~~~a~ 320 (382)
T d1j0ha3 241 PWLRGDQFDAVMNYPFTDGVLRFFAKEEISARQFANQMMHVLHSYPNNVNEAAFNLLGSHDTSRILTVCGGDIRKVKLLF 320 (382)
T ss_dssp GGCSSSSCSEEBCHHHHHHHHHHHTSCCSCHHHHHHHHHHHHHTSCHHHHHTCBCBSCCTTSCCHHHHTTTCHHHHHHHH
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 34213554410155310456654303543201221022210113654467662320467777741213488599999999
Q ss_pred -------------------------------------------------------------E
Q ss_conf -------------------------------------------------------------8
Q 002647 518 -------------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~lllt~pG~P~iy~G~E~G~~~~~~~~~r~~~~W~~~~~~~~l~~~~k~L~~lR~~~paL~r 382 (382)
T d1j0ha3 321 LFQLTFTGSPCIYYGDEIGMTGGNDPECRKCMVWDPMQQNKELHQHVKQLIALRKQYRSLRR 382 (382)
T ss_dssp HHHHHSSSCCEEETTGGGTCCCCSTTGGGCCCCCCTTTSCHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHCCCCCEEECCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHCC
T ss_conf 99998179888986863286899880103577888654576999999999999842997586
|
| >d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: MGS-like domain: Mannosylglycerate synthase, MGS species: Rhodothermus marinus [TaxId: 29549]
Probab=100.00 E-value=0 Score=28724.16 Aligned_cols=1 Identities=0% Similarity=0.072 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 slVVIP~~NEe~~il~~~v~~~a~~P~~~eIvVvDdsSdDtt~~i~~~~~~~~~~~~~~v~~~~~~~l~~~~~GKG~g~~ 80 (381)
T d2bo4a1 1 SLVVFPFKHEHPEVLLHNVRVAAAHPRVHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKGDGMN 80 (381)
T ss_dssp CEEEEECCSSCHHHHHHHHHHHHHSTTCCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCHHHH
T ss_conf 98999727885889999999997589814999986999875999999852300113321001110023546578848899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~A~~~g~~~a~gd~lvflDADl~~~~pe~i~~L~~~i~~g~d~V~g~y~R~~~~grvt~~l~~pll~~l~~~~~~~~i~d 160 (381)
T d2bo4a1 81 TALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADFGYGLVRHYFPRASTDAMITWMITRTGFALLWPHTELSWIEQ 160 (381)
T ss_dssp HHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHTTCSEEEEECCCCTTSCHHHHHTHHHHHHHHCTTSSGGGCSC
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999997088888999758767677999999999876305758986314567882236755899999860201565054
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 Pl~G~~a~~R~~~~~L~~~~~v~~~~~~G~Di~lt~~A~~~G~rI~EV~i~~~~l~~~f~~v~~~~f~l~~~~~~~W~~~ 240 (381)
T d2bo4a1 161 PLGGELLMRREVAAMLYEDERVRRRSDWGIDTLYTFVTVQQGVSIYECYIPEGKAHRLYGGLDDLRTMLVECFAAIQSLQ 240 (381)
T ss_dssp TTCCCEEEEHHHHHHHHHCHHHHTCCSTTHHHHHHHHHHHTTCCEEEEECTTCCCCCCSCCGGGGHHHHHHHHHHHHHHT
T ss_pred CCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEC
T ss_conf 77610104099999862434556567866244999999985974784478778777899999999999999987782363
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~p~~~~g~~~~~~p~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (381)
T d2bo4a1 241 HEVVGQPAIHRQEHPHRVPVHIAERVGYDVEATLHRLMQHWTPRQVELLELFTTPVREGLRTCQRRPAFNFMDEMAWAAT 320 (381)
T ss_dssp TCCCCSCCCEEECCCCCCCHHHHTCCCSCHHHHHHHHTSSCCHHHHHHGGGSCHHHHHHHHHTTTSCCCTTCCHHHHHHH
T ss_pred CEECCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
T ss_conf 33322012022557445888888752047999999999755777999998569988888987444664778767999999
Q ss_pred ------------------------------------------------------------E
Q ss_conf ------------------------------------------------------------8
Q 002647 518 ------------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------------a 518 (897)
.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (381)
T d2bo4a1 321 YHVLLEHFQPGDPDWEELLFKLWTTRVLNYTMTVALRGYDYAQQYLYRMLGRYRYQAALEN 381 (381)
T ss_dssp HHHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHTGGGCHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999997301460688871056889999999999976079899999999877787876249
|
| >d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Xylanase inhibitor TAXI-I species: Wheat (Triticum aestivum) [TaxId: 4565]
Probab=100.00 E-value=0 Score=28721.27 Aligned_cols=1 Identities=0% Similarity=-2.188 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~pi~~~~~~~~Y~~~i~iGtpliiDTGSs~~Wvpc~~c~~~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~ 80 (381)
T d1t6ex_ 1 LPVLAPVTKDPATSLYTIPFHDGASLVLDVAGPLVWSTCDGGQPPAEIPCSSPTCLLANAYPAPGCPAPSCGSDKHDKPC 80 (381)
T ss_dssp CCEEEEEEECTTTCCEEEEEETTEEEEEETTCCCEEECCCTTCCCCCCBTTSHHHHHHHSSCCTTCCCCCC------CBC
T ss_pred CCEEEEECCCCCCCEEEEEEECCCCEEEECCCCCEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98798112269988599999769866998998811460678877766562780264235757888887666678778888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~Y~~Gs~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dGi~Glg~~~~s~~~ql~~~~~~ 160 (381)
T d1t6ex_ 81 TAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASLPRGSTGVAGLANSGLALPAQVASAQKV 160 (381)
T ss_dssp EECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTSCTTEEEEEECSSSTTSHHHHHHHHHTC
T ss_pred CEEEEEECCCCEEEEEEEEEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHCCC
T ss_conf 60677838998888799999999653223552025885112202435665444667630210588873157887651376
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~fsl~l~~~~~~~~~~~~g~~~~~~~~g~~~~~pi~~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~i~DTGtt~ 240 (381)
T d1t6ex_ 161 ANRFLLCLPTGGPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALATGGVMLSTRLPY 240 (381)
T ss_dssp CSEEEEECCSSSCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECCCCTTCSCTTCEEECSSCSS
T ss_pred CEEEEEECCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEEEECCEEECCCCCCCCCCCEEEECCCCE
T ss_conf 44899554777654237603656633357833777654157874257888778518846615755456763687427734
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~~~f~~~~~~~i~~~~y~~~ 320 (381)
T d1t6ex_ 241 VLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYAVPNVQLGLDGGSDWTMTGKNSMVD 320 (381)
T ss_dssp EEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCEETTEECCCCEEEEETTSCEEEECHHHHEEE
T ss_pred EECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCEEEECHHHEEEE
T ss_conf 97778999999999988751445664211101466677522622565555565431461799975996799770473899
Q ss_pred ------------------------------------------------------------E
Q ss_conf ------------------------------------------------------------8
Q 002647 518 ------------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~Cl~i~~~~~~~~~~~~~~~~ILG~~flr~~y~vfD~~~~~IGfA~~~~~~~~~~~ 381 (381)
T d1t6ex_ 321 VKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLPHFTGCGGL 381 (381)
T ss_dssp EETTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEECCTTCCSCC-
T ss_pred ECCCCEEEEEEECCCCCCCCCCCCCEEECHHHHCCEEEEEECCCCEEEEEECCCCCCCCCC
T ss_conf 0798489999832556677888973898979848689999899999999877888887688
|
| >d1by7a_ e.1.1.1 (A:) Plasminogen activator inhibitor-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Serpins superfamily: Serpins family: Serpins domain: Plasminogen activator inhibitor-2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28724.95 Aligned_cols=1 Identities=0% Similarity=-0.394 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~l~~~~~~Fa~~L~~~l~~~~~~~N~v~SP~si~~~L~~l~~Ga~g~T~~el~~~L~~~~~~~~~~~~~~~~~~l~~~l 80 (381)
T d1by7a_ 1 EDLCVANTLFALNLFKHLAKASPTQNLFLSPWSISSTMAMVYMGSRGSTEDQMAKVLQFNEVGAAADKIHSSFRSLSSAI 80 (381)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHSSSSCEEECHHHHHHHHHHHHHTCCHHHHHHHHHHTTTTTTCCG-GGHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 90778999999999999873098985998789999999999986664999999997089987888999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~IN~wv~~~T~g~I~~~~~~~~l~~~t 160 (381)
T d1by7a_ 81 NASTGNYLLESVNKLFGEKSASFREEYIRLCQKYYSSEPQAVDFLECAEEARKKINSWVKTQTKGKIPNLLPEGSVDGDT 160 (381)
T ss_dssp C------CEEEEEEEEEETTSCBCHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHTTTSCTTSSCTTSCCTTC
T ss_pred HCCCCCCEEEECCCHHCCCCCCCCHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 56798847866000000368732889999999861773020443212599999999999975247754567855679731
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~lvna~~fk~~W~~~F~~~~t~~~~F~~~~~~~~~V~mm~~~~~~~~~~~~~~~~~~v~lp~~~~~~m~iilp~~~~~ 240 (381)
T d1by7a_ 161 RMVLVNAVYFKGKWKTPFEKKLNGLYPFRVNSAQRTPVQMMYLREKLNIGYIEDLKAQILELPYAGDVSMFLLLPDEIAD 240 (381)
T ss_dssp CEEEEEEEEECCCBSSCCEECC---EEEEEETTEEEEECEEEEEEEEEEEEETTTTEEEEEEEETTTEEEEEEEESSCCS
T ss_pred HHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCC
T ss_conf 75611244774211578752356555333689805899516651555543136767499996147970799996277665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~v~lPkF~i~~~~dl~~~L~~lGi~~~F~~~~Adfs~is~~~~l~vs~i 320 (381)
T d1by7a_ 241 VSTGLELLESEITYDKLNKWTSKDKMAEDEVEVYIPQFKLEEHYELRSILRSMGMEDAFNKGRANFSGMSERNDLFLSEV 320 (381)
T ss_dssp SSSSCHHHHHHCCHHHHHHHTSTTTEEEEEEEEEEECEEEEEEEECHHHHHHTTCCGGGCTTTCCCTTTBSCSCCCCCEE
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCEEEEEEECHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCEEEEE
T ss_conf 35666776642258899987512114340489965648997550569999856851120445454445678898157667
Q ss_pred ------------------------------------------------------------E
Q ss_conf ------------------------------------------------------------8
Q 002647 518 ------------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------------a 518 (897)
=
T Consensus 321 ~q~~~ieVdE~Gt~aaa~t~~~~~~~~~~~~~~f~~nrPF~f~I~d~~t~~iLF~G~v~~P 381 (381)
T d1by7a_ 321 FHQAMVDVNEEGTEAAAGTGGVMTGRTGHGGPQFVADHPFLFLIMHKITNCILFFGRFSSP 381 (381)
T ss_dssp EEEEEEEECSCBC-----------------CCEEECCSCEEEEEEETTTTEEEEEEEECCC
T ss_pred EEEEEEEECCCCCCCCCCCCEEEECCCCCCCCEEEECCCEEEEEEECCCCCEEEEEEECCC
T ss_conf 8889999878842023133200003568999879933998999999999978999994398
|
| >d1odza_ c.1.8.3 (A:) Mannanase A, ManA {Pseudomonas cellulosa (Cellvibrio japonicus) [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Mannanase A, ManA species: Pseudomonas cellulosa (Cellvibrio japonicus) [TaxId: 155077]
Probab=100.00 E-value=0 Score=28724.25 Aligned_cols=1 Identities=0% Similarity=-1.755 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~p~~~~lvd~~At~~tk~L~~~L~~~~g~~il~Gqq~~~~~g~~~~~~~~~~sdv~~~tG~yPAv~G~D~~~~~~~~~~ 80 (381)
T d1odza_ 1 VKPVTVKLVDSQATMETRSLFAFMQEQRRHSIMFGHQHETTQGLTITRTDGTQSDTFNAVGDFAAVYGWDTLSIVAPKAE 80 (381)
T ss_dssp CCCEECCCSSTTCCHHHHHHHHHHHHHTTTCEEEEEETTTTCCSSCSCCSSSCCHHHHHHSSCCSEEEEEGGGTSTTCTT
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHCCCCCCCCH
T ss_conf 98877620597779999999999998648966983355444564436665306667640377744201200135687321
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~GgIvt~~WH~~~P~~~~~~~~~~~~~~~d~~~~v~~~lpg~~~~~~~~~~ld~ia~~~~~L~~~~~~ 160 (381)
T d1odza_ 81 GDIVAQVKKAYARGGIITVSSHFDNPKTDTQKGVWPVGTSWDQTPAVVDSLPGGAYNPVLNGYLDQVAEWANNLKDEQGR 160 (381)
T ss_dssp CCCHHHHHHHHHTTCEEEEECCCCCTTTGGGCSSTTTTSTTCCSCCSTTTSTTSTTHHHHHHHHHHHHHHHHTCBCTTSC
T ss_pred HHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 44999999999779959998730788987777641577643135667504899703699999999999999975540388
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~vPVl~Rp~hE~nG~WfwWg~~~~~p~~y~~lwr~~~~~l~~~~g~~Nliwv~sp~~~~~~~~~~~~~~YPGDdyVDivG 240 (381)
T d1odza_ 161 LIPVIFRLYHENTGSWFWWGDKQSTPEQYKQLFRYSVEYLRDVKGVRNFLYAYSPNNFWDVTEANYLERYPGDEWVDVLG 240 (381)
T ss_dssp BCCEEEECSCSTTSSSSTTSTTSSCHHHHHHHHHHHHHHHHTTSCCCSEEEEECCBCCSSCCHHHHHSSCCCTTTCSEEC
T ss_pred CCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 76289964210479865667889998999999999999998715986189986478787776444201089988677888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~D~Y~~~~~~~~~~~~~~~~l~~~~~~A~~~gKp~altE~G~~~~~~~~~~~~~~W~~~~l~~i~~~p~~~~i~y~~~W~ 320 (381)
T d1odza_ 241 FDTYGPVADNADWFRNVVANAALVARMAEARGKIPVISGIGIRAPDIEAGLYDNQWYRKLISGLKADPDAREIAFLLVWR 320 (381)
T ss_dssp CEEEECSSSCHHHHHHHHHHHHHHHHHHHHHTCEECBCEEEECHHHHHTTCCCTTHHHHHHHHHHHSTTGGGCSEEEECC
T ss_pred EECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEE
T ss_conf 63557888753589999999999999998559951663036667711026765426999999997282222443899985
Q ss_pred ------------------------------------------------------------E
Q ss_conf ------------------------------------------------------------8
Q 002647 518 ------------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------------a 518 (897)
+
T Consensus 321 N~~~~~~~~~~~~~~~~~~p~p~~~~~g~~~~~dF~~f~~~~~~lf~~dlp~ly~~p~~~~ 381 (381)
T d1odza_ 321 NAPQGVPGPNGTQVPHYWVPANRPENINNGTLEDFQAFYADEFTAFNRDIEQVYQRPTLIV 381 (381)
T ss_dssp CCTTCEEC--CCEECCCCSCCSSHHHHHTSHHHHHHHHHHSTTEECGGGCCSCSCCCEECC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHCHHHHHCCCCCC
T ss_conf 6766556666677763336777634457642899999976960113444807551677779
|
| >d3bvua3 c.6.2.1 (A:31-411) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: 7-stranded beta/alpha barrel superfamily: Glycoside hydrolase/deacetylase family: alpha-mannosidase domain: Golgi alpha-mannosidase II species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=100.00 E-value=0 Score=28728.19 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~q~~~~~~~~~~~~~~~kl~VhlV~HsH~D~gWl~t~~e~~~~~~~~i 80 (381)
T d3bvua3 1 CQDVVQDVPNVDVQMLELYDRMSFKDIDGGVWKQGWNIKYDPLKYNAHHKLKVFVVPHSHNDPGWIQTFEEYYQHDTKHI 80 (381)
T ss_dssp CCCSSSCCCCCSEEHHHHHHHCCCCCCCCSSSTTSCCCCCCGGGCBTTBCEEEEEEEEEECCSSSSSCHHHHHHHTHHHH
T ss_pred CCHHHHHCCCCCEEHHHHHHHCCCCCCCCCCCCCCCCEEECHHHCCCCCCCEEEEECCCCCCHHHCCCHHHHHHHHHHHH
T ss_conf 94366405766622687886521538999716677512205421476788379993877888002375999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 l~~~l~~l~~~p~~~F~~~~~~~~~~w~~~~~pe~~~~vk~lV~~GrlEivgg~wv~~De~~~~~es~Irql~~G~~~l~ 160 (381)
T d3bvua3 81 LSNALRHLHDNPEMKFIWAEISYFARFYHDLGENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHWRNVLLQLTEGQTWLK 160 (381)
T ss_dssp HHHHHHHHHHCTTCCEEECCHHHHHHHHTTSCHHHHHHHHHHHHTTSEEESSCCSSCBCSSSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCEEECCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99999999879997799835389999999749999999999998798799687121463457997999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~fG~~p~~~w~~D~FGhs~~lp~il~~~Gi~~~~~~R~~~~~~~~~~~~k~lef~w~~~W~~~~~s~ilth~~~~~~Y~ 240 (381)
T d3bvua3 161 QFMNVTPTASWAIAPFGHSPTMPYILQKSGFKNMLIQRTHYSVKKELAQQRQLEFLWRQIWDNKGDTALFTHMMPFYSYD 240 (381)
T ss_dssp HHHCCCCCEEEECSSSSBCTHHHHHHHTTTCCEEEECCCCHHHHHHHHHTTCSEEEECCTTCSSCTTCEEEEECCSSCSS
T ss_pred HHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCHHHHCCCCCCCCCCEEECCCCCCCCCCCEEEECCCCCCCC
T ss_conf 97599973589638887657789999856988699974135542005201466504304666899880457516555668
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~p~~~~~d~~~~~~f~f~~~~~~~~~~p~~~~~~~i~~~nv~~r~~~~~~~~~~~a~~~~tn~vL~p~G~Df~y~~a~~w 320 (381)
T d3bvua3 241 IPHTCGPDPKVCCQFDFKRMGSFGLSCPWKVPPRTISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEW 320 (381)
T ss_dssp GGGTSSSCHHHHGGGCGGGSSTTSCCCTTSCCCCCCCTTTHHHHHHHHHHHHHHHHTTSSSSEEEEEEEEETCSCSHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHH
T ss_conf 85567887211345442123455777876668766625589999999999999986216887389816668787761037
Q ss_pred ------------------------------------------------------------E
Q ss_conf ------------------------------------------------------------8
Q 002647 518 ------------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------------a 518 (897)
+
T Consensus 321 ~~~~~n~~kli~~iN~~~~~~v~i~~ST~~~Yf~al~~~~~~~~~~~P~~~gDFfpYad~~ 381 (381)
T d3bvua3 321 DVQRVNYERLFEHINSQAHFNVQAQFGTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADRS 381 (381)
T ss_dssp HHHHHHHHHHHHHHHHCGGGCEEEEECCHHHHHHHHHHHHHTTSCCCCEEESCBCSCBSST
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 7888769999999971888881899889999999999987524778877678876788899
|
| >d1elua_ c.67.1.3 (A:) Cystine C-S lyase C-des {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Cystine C-S lyase C-des species: Synechocystis sp. [TaxId: 1143]
Probab=100.00 E-value=0 Score=28720.52 Aligned_cols=1 Identities=0% Similarity=-0.028 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~fp~l~~~~yld~~~~~~~p~~v~ea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~i~~~~g~t~a~ 80 (381)
T d1elua_ 1 QFPGLANKTYFNFGGQGILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFNVDPNTITITDNVTTGC 80 (381)
T ss_dssp CCGGGTTSEECCTTTCCCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTTSCGGGEEEESSHHHHH
T ss_pred CCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHH
T ss_conf 99878988895697636899999999999999865278765315679999999999999998397945199978858986
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~l~~~~g~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~i~~~t~~v~i~~~~n~tG~ 160 (381)
T d1elua_ 81 DIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHLLWNTGQ 160 (381)
T ss_dssp HHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESBCTTTCC
T ss_pred HHCCHHHHHCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 21000233247853899546541132011122334542222322233333205899998640233222123333456531
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~I~~l~~~~~~~~~~~~~vD~~~~~g~~~~~~~~~~~D~~~~s~~K~~~~p~G~g~l~~~~~~~~~~~p~~~~~~ 240 (381)
T d1elua_ 161 VLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSRLEVDYYAFTGHKWFAGPAGVGGLYIHGDCLGEINPTYVGWR 240 (381)
T ss_dssp BCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCTTTSCCSEEEEESSSTTCCCTTCEEEEECTTTGGGCCCCSCCTT
T ss_pred CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 10035788987520345321022344334554442212222333333454422122305677741888986396100244
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~ 320 (381)
T d1elua_ 241 SITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQA 320 (381)
T ss_dssp TEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCC
T ss_conf 54433333443344432222333223204555433001588744421101456667899998875089769647887653
Q ss_pred ------------------------------------------------------------E
Q ss_conf ------------------------------------------------------------8
Q 002647 518 ------------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~vsf~~~~~~~~~~i~~~L~~~gi~v~~~~~~~~lRis~~~~nt~edid~ll~~l~e~~~ 381 (381)
T d1elua_ 321 GLVSFTVDSPLGHRAIVQKLEEQRIYLRTIADPDCIRACCHYITDEEEINHLLARLADFGP 381 (381)
T ss_dssp SEEEEEECSSSCHHHHHHHHHHTTEECEEETTTTEEEEECCTTCCHHHHHHHHHHHTTCCC
T ss_pred CEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC
T ss_conf 1899983898899999999996896898668999799955788999999999999996691
|
| >d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nucleoporin domain family: Nucleoporin domain domain: Nucleoporin NUP159 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=28719.83 Aligned_cols=1 Identities=0% Similarity=-0.660 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~e~p~~~tedfgFk~l~~~~~~~~~~d~lP~~~~~LLAVsn~~GLl~aa~~~~l~V~~t~~l~~~~~~~~~~~~~ 80 (381)
T d1xipa_ 1 ASSLKDEVPTETSEDFGFKFLGQKQILPSFNEKLPFASLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTF 80 (381)
T ss_dssp CCEECCCCCEEEESSCEEEEEEEEECSCCCTTCCCSSCCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCC
T ss_pred CCCCCCCCCCEECCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCEEEEEEHHHHHHHHHCCCCCCCC
T ss_conf 97546667816646530587166212789544589644426899577788999889977999989978786556788862
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~ip~v~~vafs~d~l~v~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~l~~~~~~~~ 160 (381)
T d1xipa_ 81 KWEKEIPDVIFVCFHGDQVLVSTRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQL 160 (381)
T ss_dssp SEEEECTTEEEEEEETTEEEEEESSEEEEEESSSTTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred EECCCCCCEEEEEEECCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCEEEEEECCCCCCCC
T ss_conf 34168998689986189899995897899985100145446554556111021886069996589778999415864444
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~v~~~~~~~~~~~v~ws~kgkq~v~~~g~~~q~k~~i~~~~~~~~p~~~~~~v~sI~WL~~~~F~vvy~~~~~~~ed~ 240 (381)
T d1xipa_ 161 AQNVTSFDVTNSQLAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFGNVISETDDE 240 (381)
T ss_dssp EESEEEEEECSSEEEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEECCCCSSCSS
T ss_pred CCCCCEEEECCCCEEEEEECCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCC
T ss_conf 47752387338926999968968999818982036567788201578867786166899951756999987776666767
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~ii~~~~~~~~f~~~~Di~~pfgs~~R~p~y~~~~l~~w~~~~~~l~iv~Ss~s~di~vl~~~~~~~~~~D~~ 320 (381)
T d1xipa_ 241 VSYDQKMYIIKHIDGSASFQETFDITPPFGQIVRFPYMYKVTLSGLIEPDANVNVLASSCSSEVSIWDSKQVIEPSQDSE 320 (381)
T ss_dssp CCCCEEEEEEEEETTEEEEEEESSSCCCCCCSCCCCCEEEEEEEEEEETTEEEEEEEETTCSBCEEECSSSEEEESSGGG
T ss_pred CCCCEEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCEEEEEECCCCEEEECCCC
T ss_conf 76433799982699983035256566776566667517999830056567868999556763456861367489812675
Q ss_pred ------------------------------------------------------------E
Q ss_conf ------------------------------------------------------------8
Q 002647 518 ------------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------------a 518 (897)
-
T Consensus 321 Ra~lP~~~~~d~Dt~piGlalD~ss~~~v~~p~~g~~~~~plP~l~vL~~~G~L~~ww~~~ 381 (381)
T d1xipa_ 321 RAVLPISEETDKDTNPIGVAVDVVTSGTILEPCSGVDTIERLPLVYILNNEGSLQIVGLFH 381 (381)
T ss_dssp CCBCCBCTTTCCBCCEEEEEEECSCCC--------------CCEEEEEETTSEEEEEEEEC
T ss_pred CEEECCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCEEEEECCCCEEEEEEEEC
T ss_conf 3040357788876531589997124752315788822278998899996987899999879
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=100.00 E-value=0 Score=28721.18 Aligned_cols=1 Identities=0% Similarity=-1.391 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~p~~p~~~~~~~~~~~~~~~~~~~~v~i~~rDG~~L~~~v~~P~~~~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~ 80 (381)
T d1mpxa2 1 TSPMTPDITGKPFVAADASNDYIKREVMIPMRDGVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAG 80 (381)
T ss_dssp CCTTSCSSCSSCCCCCCTTCSEEEEEEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 98989999998777776555866988999899998999999996899973089997567789765656665444320068
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~a~~Gy~vv~~d~RG~g~S~G~~~~~~~~~~~~~~~~~~~~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~ 160 (381)
T d1mpxa2 81 DDVFVEGGYIRVFQDVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMA 160 (381)
T ss_dssp GHHHHHTTCEEEEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHH
T ss_pred HHHHHHCCCEEEEEECCCCCCCCCCEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHH
T ss_conf 99999689799998137657889853315201210132006789999999998753588576504560365778889888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 a~~~~~~l~a~v~~~~~~d~~~~~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (381)
T d1mpxa2 161 LTNPHPALKVAVPESPMIDGWMGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLE 240 (381)
T ss_dssp HTSCCTTEEEEEEESCCCCTTTTSSSEETTEEBGGGHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGG
T ss_pred HHCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCC
T ss_conf 75356521043232454252010243468335322289998642110366112110135677787525654424023144
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~d~~w~~~s~~~~~~~~~i~vP~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~~~~~LviGPw~H~~~ 320 (381)
T d1mpxa2 241 QLPWWHKLTEHAAYDAFWQEQALDKVMARTPLKVPTMWLQGLWDQEDMWGAIHSYAAMEPRDKRNTLNYLVMGPWRHSQV 320 (381)
T ss_dssp GSHHHHHHHHTCSSCHHHHTTCHHHHHHTSCCCSCEEEEEETTCSSCSSHHHHHHHHHGGGCTTSSSEEEEEESCCTTGG
T ss_pred CCHHHHHHHHCCCCCCHHHHCCCHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
T ss_conf 46177887527875301232690266652345674389842555775653899999999842666783699936767787
Q ss_pred ------------------------------------------------------------E
Q ss_conf ------------------------------------------------------------8
Q 002647 518 ------------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------------a 518 (897)
=
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~l~wFD~~LKg~~~~~~~ppV~~~~~G~~~Wr~~~~W 381 (381)
T d1mpxa2 321 NYDGSALGALNFEGDTARQFRHDVLRPFFDQYLVDGAPKADTPPVFIYNTGENHWDRLKAW 381 (381)
T ss_dssp GSCCSEETTEECSSCHHHHHHHHTHHHHHHHHHSTTCCCCCCCSEEEEETTTTEEEEESSS
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEECCCC
T ss_conf 6677767766665101134689999999999727999999999889997899968407979
|
| >d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Fungal alpha-amylases species: Aspergillus oryzae, Taka-amylase [TaxId: 5062]
Probab=100.00 E-value=0 Score=28720.06 Aligned_cols=1 Identities=0% Similarity=-0.560 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~p~~W~~~~iY~i~~~~F~~~~~~~~~~~~~~~~~~~gGd~~gi~~~Ldyl~~LGv~~I~L~Pi~~~~~~~~~~~~~~~ 80 (381)
T d2guya2 1 ATPADWRSQSIYFLLTDRFARTDGSTTATCNTADQKYCGGTWQGIIDKLDYIQGMGFTAIWITPVTAQLPQTTAYGDAYH 80 (381)
T ss_dssp CCHHHHTTCCEEEECHHHHCBTTCCSSCCCCGGGTCCCCBCHHHHHHTHHHHHTTTCCEEEECCCEEECCCCBTTBCCTT
T ss_pred CCCCCCCCCEEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCC
T ss_conf 99702147829999755211799988877787667647848999999699998779998996988778766688899998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 gY~~~d~~~vd~~~Gt~~dfk~lv~~~H~~Gi~VilD~V~NH~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (381)
T d2guya2 81 GYWQQDIYSLNENYGTADDLKALSSALHERGMYLMVDVVANHMGYDGAGSSVDYSVFKPFSSQDYFHPFCFIQNYEDQTQ 160 (381)
T ss_dssp SCSEEEEEEECTTSCCHHHHHHHHHHHHHTTCEEEEEECCSBCCEEBCGGGCCGGGSBSCCSGGGBCCSCBCCCTTCHHH
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCC
T ss_conf 75046646655677877899999989886063213100124666545765222334689875431001344445444554
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~dln~~n~~v~~~~~~~~~~w~~~~giDGfR~D~~~~~~~~f~~~~~~~~~~~~igE~~~~~~~~~~ 240 (381)
T d2guya2 161 VEDCWLGDNTVSLPDLDTTKDVVKNEWYDWVGSLVSNYSIDGLRIDTVKHVQKDFWPGYNKAAGVYCIGEVLDGDPAYTC 240 (381)
T ss_dssp HHHSBEECSSEEECBBCTTSHHHHHHHHHHHHHHHHHHTCCEEEETTGGGSCGGGHHHHHHHHTSEEEECCCCSCHHHHG
T ss_pred CCEEECCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHCCHHHHHHHHHCCEEEEEEECCCCCHHHHC
T ss_conf 32023257765510103355889999998765103113555103403754589999764321402563110364075540
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~enHD~~R~~s~~~~~~~~~~a~~~l~t 320 (381)
T d2guya2 241 PYQNVMDGVLNYPIYYPLLNAFKSTSGSMDDLYNMINTVKSDCPDSTLLGTFVENHDNPRFASYTNDIALAKNVAAFIIL 320 (381)
T ss_dssp GGGGTSSEEBCHHHHHHHHHHHSSTTCCHHHHHHHHHHHHHHSSCGGGSEECSCCTTSCCGGGTCCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 23324444224066799999996267761778999998874067643000101676752210225889999999999998
Q ss_pred ------------------------------------------------------------E
Q ss_conf ------------------------------------------------------------8
Q 002647 518 ------------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~pGiP~iy~G~E~g~~g~~~~~~r~~~~~~~~~~~~~l~~~i~~L~~lR~~~~~~~~~~~~ 381 (381)
T d2guya2 321 NDGIPIIYAGQEQHYAGGNDPANREATWLSGYPTDSELYKLIASANAIRNYAISKDTGFVT 381 (381)
T ss_dssp SSSEEEEETTGGGTCCCCSTTTTCCCGGGGTCCTTSHHHHHHHHHHHHHHHHHHHCTTTTT
T ss_pred CCCCCEEECCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 0897298736002757998811001466556767879999999999997488641699879
|
| >d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Fungal alpha-amylases species: Aspergillus niger, acid amylase [TaxId: 5061]
Probab=100.00 E-value=0 Score=28718.39 Aligned_cols=1 Identities=0% Similarity=-1.091 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~~~W~~~~iY~i~~~~F~~~~~~~~~~~~~~~~~~~gG~~~g~~~kLdyL~~LGv~~I~L~Pi~~~~~~~~~~~~~~~ 80 (381)
T d2aaaa2 1 LSAASWRTQSIYFLLTDRFGRTDNSTTATCNTGNEIYCGGSWQGIIDHLDYIEGMGFTAIWISPITEQLPQDTADGEAYH 80 (381)
T ss_dssp CCHHHHTTCCEEECCHHHHCCTTCCSCCCCCGGGCSCCCCCHHHHHHTHHHHHTTTCCEEEECCCEEECCCCBTTBCSTT
T ss_pred CCCHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCC
T ss_conf 98034488727999838106899998877777767758938999999799999769998994987668765788998875
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 gY~~~d~~~id~~~Gt~~~~k~lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (381)
T d2aaaa2 81 GYWQQKIYDVNSNFGTADNLKSLSDALHARGMYLMVDVVPDHMGYAGNGNDVDYSVFDPFDSSSYFHPYCLITDWDNLTM 160 (381)
T ss_dssp SCSEEEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEECCSBCCBSSCGGGCCGGGSBSCCSGGGBCCCCBCCCTTCHHH
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 56646543311024988999999998866311110023445433456776555333587554345588766456445555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~pdln~~np~v~~~~~~~~~~~~~~~giDGfR~D~~~~~~~~f~~~~~~~~~~~~igE~~~~~~~~~~ 240 (381)
T d2aaaa2 161 VEDCWEGDTIVSLPDLDTTETAVRTIWYDWVADLVSNYSVDGLRIDSVLEVQPDFFPGYNKASGVYCVGEIDNGNPASDC 240 (381)
T ss_dssp HHHSBEECSSSEECBBCTTSHHHHHHHHHHHHHHHHHHTCCEEEESCSTTSCGGGHHHHHHHHTSEEEECCCCSCHHHHG
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHH
T ss_conf 67775678666675313233255667766644204221322000001233307899998744532233530379813321
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~nHD~~R~~~~~~~~~~~~~a~a~llt 320 (381)
T d2aaaa2 241 PYQKVLDGVLNYPIYWQLLYAFESSSGSISNLYNMIKSVASDCSDPTLLGNFIENHDNPRFAKYTSDYSQAKNVLSYIFL 320 (381)
T ss_dssp GGGGTSSEEBCHHHHHHHHHHHSSTTSCHHHHHHHHHHHHHHCSCGGGSEECSCCTTSCCGGGTCCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 11344333002157899999985487307899999974331157721103435667721041246989999999999997
Q ss_pred ------------------------------------------------------------E
Q ss_conf ------------------------------------------------------------8
Q 002647 518 ------------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------------a 518 (897)
-
T Consensus 321 ~pG~P~iy~G~E~g~~g~~~p~~r~~~~~~~~~~~~~l~~~i~~L~~lRk~~~al~~~~~~ 381 (381)
T d2aaaa2 321 SDGIPIVYAGEEQHYAGGKVPYNREATWLSGYDTSAELYTWIATTNAIRKLAIAADSAYIT 381 (381)
T ss_dssp SSSEEEEETTTTTTCCCCTTTTTCCCGGGGTTCTTCHHHHHHHHHHHHHHHHHHHCTTTTT
T ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHCCCCCC
T ss_conf 0797675747214878998834111367677746769999999999997049453279879
|
| >d1ibja_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Cystathionine beta-lyase, CBL species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=0 Score=28654.23 Aligned_cols=1 Identities=0% Similarity=-1.656 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~t~~~h~~~~~dp~ga~~~PI~~sstf~~~~~~~~~~~~Y~R~~nPt~~~le~~la~LE~~~~a~~fsSGMaAisal 80 (380)
T d1ibja_ 1 ASVSTLLVNLDNKFDPFDAMSTPLYQTATFKQPSAIENGPYDYTRSGNPTRDALESLLAKLDKADRAFCFTSGMAALSAV 80 (380)
T ss_dssp CCHHHHHTCCCCSSCTTCCSSCCCCCCSBCCCSSSSCCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHH
T ss_pred CCHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHH
T ss_conf 97767624279999999896188557766461887766895140898868999999999971986188603199999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 l~ll~~Gd~vv~~~~~Yg~t~~l~~~~~~~~gi~~~~~d~~~~~~~~~ai~~~t~li~~EtpsNP~l~v~Di~~i~~iA~ 160 (380)
T d1ibja_ 81 THLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTKLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKISEMAH 160 (380)
T ss_dssp HTTSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTTSHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHH
T ss_pred HHHHCCCCEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHH
T ss_conf 98627998799974033554012222110454212235751678877775067618996142443223445899999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~g~~~vVDnT~atP~~~~Pl~~GaDiVvhS~TKyi~GhsDv~~G~v~~~~~~~~~~~~~~~~~~G~~l~p~~a~ll~rg 240 (380)
T d1ibja_ 161 AQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRG 240 (380)
T ss_dssp TTTCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTTCBCCHHHHHHHHHH
T ss_pred HCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHC
T ss_conf 75980896243004300255455898999606520256667554433344126777787630466773787779999842
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 l~Tl~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~a~~~~~~~g~~~s~~~~~~~~a~~f~d~l~l~~~a~ 320 (380)
T d1ibja_ 241 IKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSVALSKHLVETTKYFSIAV 320 (380)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECSCHHHHHHHHHHCSSSEECS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEE
T ss_conf 31445538889888899999997389866996056456864211222456542111111127999999998389175741
Q ss_pred -----------------------------------------------------------E
Q ss_conf -----------------------------------------------------------8
Q 002647 518 -----------------------------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------------------------a 518 (897)
.
T Consensus 321 SlG~~~SLi~~p~~~th~~~~~e~r~~~Gi~~~lvRlSvGlE~~eDLi~Dl~qAl~~l~~ 380 (380)
T d1ibja_ 321 SFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGIEDVDDLISDLDIAFKTFPL 380 (380)
T ss_dssp CCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCSSCHHHHHHHHHHHHHSCCC
T ss_pred CCCCCCCCCCCCHHHHHHCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCC
T ss_conf 568766130485223012089999997697939599983409999999999999976689
|
| >d1vbga3 d.142.1.5 (A:3-382) Pyruvate phosphate dikinase, N-terminal domain {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: Pyruvate phosphate dikinase, N-terminal domain domain: Pyruvate phosphate dikinase, N-terminal domain species: Maize (Zea mays) [TaxId: 4577]
Probab=100.00 E-value=0 Score=28651.36 Aligned_cols=1 Identities=0% Similarity=0.370 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
|
T Consensus 1 ~~~~~~f~~~~~~~~~~~~~lvGGK~AnLgel~~~G~pVP~GFvITt~Ay~~Fi~~n~~l~~~L~~~I~~~l~~~~~~~~ 80 (380)
T d1vbga3 1 KKRVFHFGKGKSEGNKTMKELLGGKGANLAEMASIGLSVPPGFTVSTEACQQYQDAGCALPAGLWAEIVDGLQWVEEYMG 80 (380)
T ss_dssp CCSEEEEETTEESSCTTCTTTTHHHHHHHHHHHHTTCCCCCEEEECHHHHHHHHHTTSCCCTTHHHHHHHHHHHHHHHHT
T ss_pred CCEEEECCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 98899879986568814475072889989999978599999888549999999980764658799999999987787633
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~e~~a~~s~a~~~~~~~~~~~~~~~~~~~~~~~~ 160 (380)
T d1vbga3 81 ATLGDPQRPLLLSVRSGAAVSMPGMMDTVLNLGLNDEVAAGLAAKSGERFAYDSFRRFLDMFGNVVMDIPRSLFEEKLEH 160 (380)
T ss_dssp CBTTCSSSBCCEEEECCCSSCCTTCCCCEEEETCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHH
T ss_pred CCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHH
T ss_conf 22356421011001232034566767787751352488998863231101766555553101100034024567788888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~q~m~~~~~~gv~ft~~p~~~~~~~~~I~a~~Glg~~v 240 (380)
T d1vbga3 161 MKESKGLKNDTDLTASDLKELVGQYKEVYLSAKGEPFPSDPKKQLELAVLAVFNSWESPRAKKYRSINQITGLRGTAVNV 240 (380)
T ss_dssp HHHHHTCSSGGGCCHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHTTCHHHHHHHHTTTCCCCCCCCEEE
T ss_pred HHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCCEEECCCCCCCEEE
T ss_conf 88762304543136987566788998876650487422226888887654212102477100156502641330124245
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~La~l~~~iE~~yg~P 320 (380)
T d1vbga3 241 QCMVFGNMGNTSGTGVLFTRNPNTGEKKLYGEFLVNAQGEDVVAGIRTPEDLDAMKNLMPQAYDELVENCNILESHYKEM 320 (380)
T ss_dssp EECCCSCSSTTCEEEEEESSCTTTCCSSCEEEEEESSCHHHHHHTSCCCEETHHHHHHCHHHHHHHHHHHHHHHHHHCSC
T ss_pred EEEEECCCCCEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEECCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 56663388737667613443444675213322112555545300044366531022238899999999999999981985
Q ss_pred -----------------------------------------------------------E
Q ss_conf -----------------------------------------------------------8
Q 002647 518 -----------------------------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------------------------a 518 (897)
-
T Consensus 321 qDIEWA~~dg~L~ILQaRPv~~~~~aa~~~~~d~~~~~~i~~~~~~~~~~p~~~~~~l~~ 380 (380)
T d1vbga3 321 QDIEFTVQENRLWMLQCRTGKRTGKSAVKIAVDMVNEGLVEPRSAIKMVEPGHLDQLLHP 380 (380)
T ss_dssp EEEEEEEETTEEEEEEEEECCCCHHHHHHHHHHHHHTTSSCHHHHGGGSCHHHHHHTTSC
T ss_pred CEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHCCC
T ss_conf 105999989989999744787557879999999988599688999873898577461399
|
| >d1q45a_ c.1.4.1 (A:) 12-oxophytodienoate reductase (OPR, OYE homolog) {Thale cress (Arabidopsis thaliana), OPR3 [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: FMN-linked oxidoreductases family: FMN-linked oxidoreductases domain: 12-oxophytodienoate reductase (OPR, OYE homolog) species: Thale cress (Arabidopsis thaliana), OPR3 [TaxId: 3702]
Probab=100.00 E-value=0 Score=28648.79 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~LF~P~~ig~~~lkNRiv~~pm~~~~~~~G~p~~~~~~~y~~rA~Ggglii~~~~~V~~~~~~~~~~~~~~~d~~i~ 80 (380)
T d1q45a_ 1 SNETLFSSYKMGRFDLSHRVVLAPMTRCRALNGVPNAALAEYYAQRTTPGGFLISEGTMVSPGSAGFPHVPGIYSDEQVE 80 (380)
T ss_dssp CCCCTTSCEEETTEEESCSEEECCCCCCCSGGGCCCHHHHHHHHHTCCTTCEEEEEEEESSTTCCCSTTCCBCSSHHHHH
T ss_pred CCCCCCCCCCCCCEEECCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCEEECCCCCCCCCCCCCCCHHHHH
T ss_conf 98635898118999856875884438883889979999999999998497799974508877757899986217779988
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~k~l~~~vh~~g~~~~~QL~H~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pr~mt~~eI~~ii~~ 160 (380)
T d1q45a_ 81 AWKQVVEAVHAKGGFIFCQLWHVGRASHAVYQPNGGSPISSTNKPISENRWRVLLPDGSHVKYPKPRALEASEIPRVVED 160 (380)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCTTSCCGGGSGGGCCCEESSSCCCCTTTCCEECTTSCEECCCCCEECCGGGHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEECCHHHHHHHHHH
T ss_conf 99999999873576258875307866665545567787666557666677224267755568998843787889999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 f~~aA~~A~~aGfDgVEIh~ahGyLl~qFlSp~~N~RtDeYGGs~enR~Rf~lEii~aIr~~vg~~~~~~~~~~~~d~~~ 240 (380)
T d1q45a_ 161 YCLSALNAIRAGFDGIEIHGAHGYLIDQFLKDGINDRTDQYGGSIANRCRFLKQVVEGVVSAIGASKVGVRVSPAIDHLD 240 (380)
T ss_dssp HHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCGGG
T ss_pred HHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC
T ss_conf 99999999982865366000211367654165335576655764231036677779988887015672278752022366
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~~~~pv~~~Gg~~~~~ 320 (380)
T d1q45a_ 241 ATDSDPLSLGLAVVGMLNKLQGVNGSKLAYLHVTQPRYHAYGQTESGRQGSDEEEAKLMKSLRMAYNGTFMSSGGFNKEL 320 (380)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHTTSSCCSEEEEECCC---------------CHHHHHHHHHHHHSCSCEEEESSCCHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCHHH
T ss_conf 42133123333210256676653135632477416754433334566567625667889988652488589679989999
Q ss_pred -----------------------------------------------------------E
Q ss_conf -----------------------------------------------------------8
Q 002647 518 -----------------------------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------------------------a 518 (897)
-
T Consensus 321 ae~~l~~G~~DlV~~gR~liaDPdlv~K~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (380)
T d1q45a_ 321 GMQAVQQGDADLVSYGRLFIANPDLVSRFKIDGELNKYNRKTFYTQDPVVGYTDYPFLAP 380 (380)
T ss_dssp HHHHHHTTSCSEEEESHHHHHCTTHHHHHHTTCCCCCCCGGGSSCCCSSTTTTCSCCCCC
T ss_pred HHHHHHCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 999998699632455299887924999996299988887466458999898577789897
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=100.00 E-value=0 Score=28646.66 Aligned_cols=1 Identities=0% Similarity=-1.025 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~i~fd~dGVll~~~~~~D~s~ltv~~ll~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~k~~g~n~~~dl 80 (380)
T d1qyia_ 1 MKKILFDVDGVFLSEERCFDVSALTVYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDM 80 (380)
T ss_dssp CCEEEECSBTTTBCSHHHHHHHHHHHHHHHHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHHHHTTCCCHHHH
T ss_pred CCEEEEECCCEEECCEEECCHHHHHHHHHHHCHHHCCCCEEEECCCCCCHHHHHHEEEEECCHHHHHHHHHCCCCHHHHH
T ss_conf 96699937807982433203676658887612011256404533765510043311133053246676662688806999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~ 160 (380)
T d1qyia_ 81 LFIVFSIHLIDILKKLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELH 160 (380)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHCSSCHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCHHHCC
T ss_conf 99999999998774348985778987775436408999875365556775148888765324553144755521376528
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~a~~~~r~l~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~ 240 (380)
T d1qyia_ 161 VSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGR 240 (380)
T ss_dssp CSCCGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHHCSCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCC
T ss_conf 75888999986899999999999877220223345533156675423013565334363999999999879959998899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~ 320 (380)
T d1qyia_ 241 PYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFI 320 (380)
T ss_dssp CHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEE
T ss_pred CHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEE
T ss_conf 79999999998199534785058744133311220331102369986999999998088778899999973899886999
Q ss_pred -----------------------------------------------------------E
Q ss_conf -----------------------------------------------------------8
Q 002647 518 -----------------------------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------------------------a 518 (897)
-
T Consensus 321 vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~el~~il~~l~~~~ 380 (380)
T d1qyia_ 321 VGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLDNLLEHH 380 (380)
T ss_dssp EESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHHHSCTTTTC
T ss_pred ECCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHCCCCEEECCHHHHHHHHHHHHHCC
T ss_conf 889989999999879988999458888643778976799999889999999999998509
|
| >d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelA species: Clostridium cellulolyticum [TaxId: 1521]
Probab=100.00 E-value=0 Score=28645.82 Aligned_cols=1 Identities=0% Similarity=-0.426 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~g~nlgn~lda~~~~~~~~~~~~e~~Wgnp~~t~~~i~~ik~~Gfn~vRi 80 (380)
T d1edga_ 1 MYDASLIPNLQIPQKNIPNNDGMNFVKGLRLGWNLGNTFDAFNGTNITNELDYETSWSGIKTTKQMIDAIKQKGFNTVRI 80 (380)
T ss_dssp CCCGGGSCCCCCCCCCCCCSHHHHHHHHHCSEEECTTSTTCCCCSSCCSGGGHHHHTTCSCCCHHHHHHHHHHTCCEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEE
T ss_conf 95434576564465566888789999864784623867036887656678987776699616699999999869987997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 Pv~w~~~~~~~~~~i~~~~l~~v~~vV~~a~~~Gl~VIldlHh~~~~~~~~~~~~~~~~~~~~~~~~~W~qiA~~fkd~~ 160 (380)
T d1edga_ 81 PVSWHPHVSGSDYKISDVWMNRVQEVVNYCIDNKMYVILNTHHDVDKVKGYFPSSQYMASSKKYITSVWAQIAARFANYD 160 (380)
T ss_dssp CCCCGGGEETTTTEECHHHHHHHHHHHHHHHTTTCEEEEECCSCBCTTTSBCSSGGGHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred CCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 34078826899885298999999999999997699799845667887766678656757799999999999887606898
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~l~fel~NEP~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~IR~~~~~n~~r~i~v~g~~~~~~~~~~~~~~~p~ 240 (380)
T d1edga_ 161 EHLIFEGMNEPRLVGHANEWWPELTNSDVVDSINCINQLNQDFVNTVRATGGKNASRYLMCPGYVASPDGATNDYFRMPN 240 (380)
T ss_dssp TTEEEECCSSCCCTTSTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHTCGGGGTSCEEEECGGGCHHHHHSTTCCCCC
T ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHCCCC
T ss_conf 66999621344446786544532223108999999999999999999984457886089857886477543000111554
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 d~~~~~~~li~s~H~Y~p~~f~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~giPviiGEfG~~~~~~~~~r~ 320 (380)
T d1edga_ 241 DISGNNNKIIVSVHAYCPWNFAGLAMADGGTNAWNINDSKDQSEVTWFMDNIYNKYTSRGIPVIIGECGAVDKNNLKTRV 320 (380)
T ss_dssp CCTTCCSCEEEEEECCCSHHHHTSCGGGTCCCCCCTTCHHHHHHHHHHHHHHHHHTGGGTCCEEEEEECCCCSSCHHHHH
T ss_pred CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHH
T ss_conf 45677887799975157643566667767877655576113899999999999988754962999623376789858999
Q ss_pred -----------------------------------------------------------E
Q ss_conf -----------------------------------------------------------8
Q 002647 518 -----------------------------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~~~a~~~gi~~~~Wdn~~~~~~~~~fg~~dr~~~~w~~p~~~~~~~~~~~g~~~ 380 (380)
T d1edga_ 321 EYMSYYVAQAKARGILCILWDNNNFSGTGELFGFFDRRSCQFKFPEIIDGMVKYAFGLIN 380 (380)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCCCSSSSCCCCCEETTTTEESSHHHHHHHHHHSCCCCC
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf 999999999998699279987998888866745153788865889999999998648999
|
| >d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=0 Score=28648.08 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~e~DViIVGgGPAGlsaA~~LA~l~~~~~~Gl~VlllEK~~~pG~k~~~G 80 (380)
T d2gmha1 1 CKVPRITTHYTIYPRDQDKRWEGVNMERFAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSG 80 (380)
T ss_dssp CCSCCCCCCTTTSCTTSCGGGSSCCCCCCEEECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC
T ss_conf 98885335642245335754444574201363888998977899999999985213413999799981788899874535
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 gvl~~~~l~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ae~~g~~~~~ 160 (380)
T d2gmha1 81 ACLDPRAFEELFPDWKEKGAPLNTPVTEDRFGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYP 160 (380)
T ss_dssp CEECTHHHHHHCTTHHHHTCCCCEECCEEEEEEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEET
T ss_pred CCCCHHHHHHHCCCHHHHCCCCCCCEECCEEEEEECCCCCCCCCCCCHHCCCCCCEEEHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 16668899987630344355301320012279963366466545670110245551320467888999987631543443
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~~G~l~k~li~~~~l~~~~~~~~G~~sip 240 (380)
T d2gmha1 161 GYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQGGFQSIP 240 (380)
T ss_dssp TCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTSCCCCGGGGCC
T ss_pred ECCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 01001344225773110122332323334556555643003463799956178866288876542103665545666665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~l~~~G~lLVGDAAG~vnP~~g~GI~~Am~SG~lAAeai~~al~~~~~~~~~~~~~~~~y~~~~~~s~~~~eL~~~rn~~ 320 (380)
T d2gmha1 241 KLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSENLQSKTIGLHVTEYEDNLKNSWVWKELYSVRNIR 320 (380)
T ss_dssp CCEETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCCCCCCSSSSCCCTHHHHHHHTSHHHHHHHHTTTTT
T ss_pred CCCCCCEEEEECCCCCCCHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 34069806873354313512148753220237889999999997188643103444556889987628999999863877
Q ss_pred -----------------------------------------------------------E
Q ss_conf -----------------------------------------------------------8
Q 002647 518 -----------------------------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~g~~~g~~~~~~~~~~~~g~~p~tl~~~~~d~~~l~~~~~~~~i~y~~~d~~~~ 380 (380)
T d2gmha1 321 PSCHGILGVYGGMIYTGIFYWIFRGMEPWTLKHKGSDSDQLKPAKDCTPIEYPKPDGQIS 380 (380)
T ss_dssp GGGGSTTTHHHHHHHHHHHTTTTTTCCSCCCCCCSCGGGCCCCGGGSCCCCCCCCCSSSS
T ss_pred HHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 898752108999999999999857898701789997889988798589998999989169
|
| >d1elja_ c.94.1.1 (A:) D-maltodextrin-binding protein, MBP {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Periplasmic binding protein-like II superfamily: Periplasmic binding protein-like II family: Phosphate binding protein-like domain: D-maltodextrin-binding protein, MBP species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=100.00 E-value=0 Score=28643.62 Aligned_cols=1 Identities=0% Similarity=-0.892 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~k~~eg~i~~W~~~~~~~~~~~~~~~~~F~~~~p~I~v~~~~~~~~~~~l~~~~~~g~~pDi~~~~~~~~~~~~~~g~l~ 80 (380)
T d1elja_ 1 MKIEEGKVVIWHAMQPNELEVFQSLAEEYMALCPEVEIVFEQKPNLEDALKAAIPTGQGPDLFIWAHDWIGKFAEAGLLE 80 (380)
T ss_dssp CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCTTEEEEEEECTTHHHHHHHHTTTTCSCSEEEEEGGGHHHHHHTTCBC
T ss_pred CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCC
T ss_conf 98766389999589803899999999999987839799998689999999999976999819999937799999879963
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~dG~~y~~P~~~~~~~l~ynkd~~~~~P~T~~e~~~~~~~l~~~~~~~~~~~~~~~~ 160 (380)
T d1elja_ 81 PIDEYVTEDLLNEFAPMAQDAMQYKGHYYALPFAAETVAIIYNKEMVSEPPKTFDEMKAIMEKYYDPANEKYGIAWPINA 160 (380)
T ss_dssp CCTTTCCHHHHTTBCHHHHHHTEETTEECEEEEEEEECEEEEETTTCSSCCSSHHHHHHHHHHHCBGGGTBCSCBCCCSH
T ss_pred CCCHHHHHCCCCCCCHHHHHHEEECCEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf 08665400221112166664103454301122222103566666676421332899999999986044771454311454
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~G~~a~~~~~~~~~~~~~~~~~ 240 (380)
T d1elja_ 161 YFISAIAQAFGGYYFDDKTEQPGLDKPETIEGFKFFFTEIWPYMAPTGDYNTQQSIFLEGRAPMMVNGPWSINDVKKAGI 240 (380)
T ss_dssp HHHHHHHTTTSCCSEETTTTEECTTSHHHHHHHHHHHHHTGGGSCSCCCHHHHHHHHHTTSSSEEEECGGGHHHHHHTTC
T ss_pred CCCCHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHC
T ss_conf 32201120478500033454467798899999999987443233545750465666405761155244288999875430
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~s~~~e~A~~fi~~l~s~e~~~~~~~~~~g~~P~~~~~~~~~~~~~~~ 320 (380)
T d1elja_ 241 NFGVVPLPPIIKDGKEYWPRPYGGVKLIYFAAGIKNKDAAWKFAKWLTTSEESIKTLALELGYIPVLTKVLDDPEIKNDP 320 (380)
T ss_dssp CEEEECCCCEEETTEEECCCCEEEEEEEEEBTTCSCHHHHHHHHHHHHHCHHHHHHHHHHHCCBCCBGGGGGCHHHHTCH
T ss_pred CCCEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCHHHHCCH
T ss_conf 26644458878776666652211000011244674599999999986326999999998348888777788598755193
Q ss_pred -----------------------------------------------------------E
Q ss_conf -----------------------------------------------------------8
Q 002647 518 -----------------------------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~g~~~~d~~~al~~~~~~i~~~~k 380 (380)
T d1elja_ 321 VIYGFGQAVQHAYLMPKSPKMSAVWGGVDGAINEILQDPQNADIEGILKKYQQEILNNMQ 380 (380)
T ss_dssp HHHHHHHHHHTCEECCCCTTHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 899999999518207889878999999999999997789992099999999999999529
|
| >d1lj5a_ e.1.1.1 (A:) Plasminogen activator inhibitor-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Serpins superfamily: Serpins family: Serpins domain: Plasminogen activator inhibitor-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28570.51 Aligned_cols=1 Identities=0% Similarity=-1.191 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~~~~~~F~~~l~~~l~~~~~~~N~v~SP~si~~~La~l~~Ga~g~T~~el~~~L~~~~~~~~~~~~~~~~~~ 80 (379)
T d1lj5a_ 1 VHHPPSYVAHLASDFGVRVFQQVAQASKDRNVVFSPYGVASVLAMLQLTTGGETQQQIQAAMGFKIDDKGMAPALRHLYK 80 (379)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHSTTBCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHTSCTTSTTHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 98976888888849999999998723969869987899999999999867728999999970999873778999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~l~~~~~~~~l~~an~l~v~~~~~~~~~f~~~~~~~y~~~~~~vdF~~~~~a~~~IN~wv~~~T~g~I~~~~~~~~l~~~ 160 (379)
T d1lj5a_ 81 ELMGPWNKDEISTTDAIFVQRDLKLVQGFMPHFFRLFRSTVKQVDFSEVERARFIINDWVKTHTKGMISNLLGKGAVDQL 160 (379)
T ss_dssp HHHCGGGSSEEEEEEEEEEETTSCCCTTHHHHHHHHHSCCCEEECTTSHHHHHHHHHHHHHHTTTTSCCCSSCTTSSCTT
T ss_pred HHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 86175554520024478773567245788998787636600135555268999999999996049932331376678965
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 t~~~lvna~~f~~~W~~~F~~~~t~~~~F~~~~~~~~~V~~M~~~~~~~~~~~~~~~~~~~~vv~Lp~~~~~~sm~iilP 240 (379)
T d1lj5a_ 161 TRLVLVNALYFNGQWKTPFPDSSTHRRLFHKSDGSTVSVPMMAQTNKFNYTEFTTPDGHYYDILELPYHGDTLSMFIAAP 240 (379)
T ss_dssp CCEEEEEEEEEEEEBSSCCCCCTTCEEEEECTTSCEEEEEEEEEEEEEEEEEEECTTSCEEEEEEEEBTTSSEEEEEEEE
T ss_pred CEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCEEECCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEECC
T ss_conf 40466721799511347677355533210346785576112354151205885036666058999603798478999647
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~~~l~vs~v 320 (379)
T d1lj5a_ 241 YEKEVPLSALTNILSAQLISHWKGNMTRLPRLLVLPKFSLETEVDLRKPLENLGMTDMFRQFQADFTSLSDQEPLHVAQA 320 (379)
T ss_dssp SSTTSCTHHHHTTCCHHHHHHHHHHCEEEEEEEEEECEEEEEEEECHHHHHHTTCCGGGCTTTCCCTTTCSSSCCCEEEE
T ss_pred CCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEEEEEEEEECHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 76666367776530077788777634313308999999984100277878867972235765565223678898077656
Q ss_pred ----------------------------------------------------------E
Q ss_conf ----------------------------------------------------------8
Q 002647 518 ----------------------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------------------a 518 (897)
=
T Consensus 321 ~hk~~iev~E~G~~a~a~t~~~~~~~~~~~~f~~drPF~f~I~~~~t~~~lf~G~v~~P 379 (379)
T d1lj5a_ 321 LQKVKIEVNESGTVASSSTAVIVSARMAPEEIIMDRPFLFVVRHNPTGTVLFMGQVMEP 379 (379)
T ss_dssp EEEEEEEECSSEEEEEEEEEEEESSCCCCCCCCBCCEEEEEEEETTTTEEEEEEEEECC
T ss_pred EEEEEEEECCCCEEECCCCEEEECCCCCCCEEEEECCEEEEEEECCCCCEEEEEEECCC
T ss_conf 88999998787145022322542268999879940998999999999968999995398
|
| >d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Pyranose 2-oxidase species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]
Probab=100.00 E-value=0 Score=28570.21 Aligned_cols=1 Identities=0% Similarity=-0.925 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 md~~yDviIVGsG~aG~v~A~~La~~G~kVlvLEaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (379)
T d2f5va1 1 MDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLKIGAHKKNTVEYQKNIDKFVNVIQGQLMSVSVPVNTLV 80 (379)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSSTTCCTTCSHHHHHCGGGHHHHHHHTCEESCCCCCCCC
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99732589989688999999999658893999936899987522346222023346664445434566333566554555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gg~~~~~~~~~~r~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 160 (379)
T d2f5va1 81 VDTLSPTSWQASTFFVRNGSNPEQDPLRNLSGQAVTRVVGGMSTHWTCATPRFDREQRPLLVKDDADADDAEWDRLYTKA 160 (379)
T ss_dssp CCCSCTTSCCCSSCCCCTTCCTTCCTTSCCTTCEECCSTTGGGGTCCCBCCCCCGGGSCCSSSSCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCEEECCCCCCHHHHHHCCCCCHHHHCCCCCCCCCCCEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHH
T ss_conf 66777777667876761688821214442454122303799846216683458988863012457776688686025564
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~ 240 (379)
T d2f5va1 161 ESYFQTGTDQFKESIRHNLVLNKLAEEYKGQRDFQQIPLAATRRSPTFVEWSSANTVFDLQNRPNTDAPEERFNLFPAVA 240 (379)
T ss_dssp HHHHTEESCTTTTCHHHHHHHHHHHHHTTTSSCCEECCEEEEEEETTEEEECCHHHHCCCCCEEETTEEEEEEEEECSEE
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHCCHHHHCCCCCEEECCCE
T ss_conf 44454899999877775277877553445656765444210047888788589886343310433776489999956999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 V~~i~~~~~~~r~~gV~~~d~~~g~~~~i~a~~vilaaGa~~tp~lL~~Sg~~~~~~~~~~~~~~~~~~~g~h~mG~~~~ 320 (379)
T d2f5va1 241 CERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGFGQLGRPNPTNPPELLPSLGSHRMGFDEK 320 (379)
T ss_dssp EEEEEECTTSSCEEEEEEEETTTCCEEEEEEEEEEECSCHHHHHHHHHHTTSSCCSSCCTTSCCSSSTTTTBTCBCSCTT
T ss_pred EEEEEEECCCCEEEEEEEEECCCCEEEEEECEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
T ss_conf 99999818999899999997999979999650899655766898997322002223345566753166545044566888
Q ss_pred ----------------------------------------------------------E
Q ss_conf ----------------------------------------------------------8
Q 002647 518 ----------------------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~vvd~~~~v~g~~nlyv~d~sv~p~~~~~nPt~t~~alA~r~a~~i~~~~~~~~~~ 379 (379)
T d2f5va1 321 EDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCEYIKQNFTPSPFT 379 (379)
T ss_dssp TTTCSBCTTCBBTTCSSEEECSGGGCCSCCCSCSHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_pred CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 88724788975213289797388556775656818889999999999999862458999
|
| >d3sila_ b.68.1.1 (A:) Salmonella sialidase {Salmonella typhimurium, strain lt2 [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Salmonella sialidase species: Salmonella typhimurium, strain lt2 [TaxId: 90371]
Probab=100.00 E-value=0 Score=28568.03 Aligned_cols=1 Identities=0% Similarity=0.271 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~yRiP~L~~~~~G~llA~~e~R~~~~~d~~~~div~~rS~DgGkTWs~~ 80 (379)
T d3sila_ 1 EKSVVFKAEGEHFTDQKGNTIVGSGSGGTTKYFRIPAMCTTSKGTIVVFADARHNTASDQSFIDTAAARSTDGGKTWNKK 80 (379)
T ss_dssp CEEEEECTTCCCCBCTTSCBCCCSBGGGBCCEEEEEEEEECTTCCEEEEEEEESSCSCSSSCEEEEEEEESSSSSCCEEE
T ss_pred CCCEEEEECCCCCCCCCCCEEEECCCCCCEEEEECCEEEEECCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCC
T ss_conf 94089984775715889858996479986255746689997999599999667789887777519999913796589999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~i~~~~~~~~~~~~~~p~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~g~tw~~p~~~~~~ 160 (379)
T d3sila_ 81 IAIYNDRVNSKLSRVMDPTCIVANIQGRETILVMVGKWNNNDKTWGAYRDKAPDTDWDLVLYKSTDDGVTFSKVETNIHD 160 (379)
T ss_dssp EEECCCCSCTTTCEEEEEEEEEEEETTEEEEEEEEEEESSCCSCGGGCCSSSSCTTCEEEEEEESSTTSCCEEECCSHHH
T ss_pred EECCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCC
T ss_conf 88647998765243477647887899978999999735788875430135678774247887658610001467425321
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~g~g~gi~~~~g~l~~p~~~~~~~~~~~~~~~~~~~sddgg~w~~~~~~~~~~~~E~~vve~dG~ll~ 240 (379)
T d3sila_ 161 IVTKNGTISAMLGGVGSGLQLNDGKLVFPVQMVRTKNITTVLNTSFIYSTDGITWSLPSGYCEGFGSENNIIEFNASLVN 240 (379)
T ss_dssp HHHHHCSEEEEEECSEECEECTTSCEEEEEEEEECTTSSCSEEEEEEEESSSSSEECCSCCEECTTCCEEEEEETTEEEE
T ss_pred CCCCCCCEEEECCCCCCEEEECCCCEEEEEEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCEEEECCCCEEE
T ss_conf 12236530455057662476046534645898815899862799999857887533540356778877889864885799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~R~~g~~~v~~S~DgG~TWse~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~r~~~~~~~s~d~g~tW~~~ 320 (379)
T d3sila_ 241 NIRNSGLRRSFETKDFGKTWTEFPPMDKKVDNRNHGVQGSTITIPSGNKLVAAHSSAQNKNNDYTRSDISLYAHNLYSGE 320 (379)
T ss_dssp EECCSSBCBCEEESSSSSCCEECTTTTTCSBCCTTCCCCEEEEEEETTEEEEEEEEECCTTSSTTCCCEEEEEECTTTCC
T ss_pred EEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCC
T ss_conf 98717966999986898623145665323221224321226883469919999889888888635899974688867788
Q ss_pred ----------------------------------------------------------E
Q ss_conf ----------------------------------------------------------8
Q 002647 518 ----------------------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~~~~~~~~~~~aYS~l~~~~~~~~~~l~~lyE~~~~i~~~~lt~~l~~~~~~~ 379 (379)
T d3sila_ 321 VKLIDDFYPKVGNASGAGYSCLSYRKNVDKETLYVVYEANGSIEFQDLSRHLPVIKSYN 379 (379)
T ss_dssp EEEEEEEECSCCCTTSCCCEEEEEEEETTEEEEEEEEEETTEEEEEECGGGHHHHHTCC
T ss_pred CEEEECCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEECCCCEEEHHHHHHHHHHCCCC
T ss_conf 67995147501589970312248747989999999998999878369776477733479
|
| >d1jr1a1 c.1.5.1 (A:17-112,A:233-514) Inosine monophosphate dehydrogenase (IMPDH) {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Inosine monophosphate dehydrogenase (IMPDH) family: Inosine monophosphate dehydrogenase (IMPDH) domain: Inosine monophosphate dehydrogenase (IMPDH) species: Chinese hamster (Cricetulus griseus) [TaxId: 10029]
Probab=100.00 E-value=0 Score=28495.90 Aligned_cols=1 Identities=0% Similarity=-2.055 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~~~~~LtfdDVllvP~~st~~sr~V~l~t~lt~~~~l~iPIIsApMdtVt~~~mA~als~~GGLGvLhr~~~ 80 (378)
T d1jr1a1 1 GLTAQQLFNCGDGLTYNDFLILPGYIDFTADQVDLTSALTKKITLKTPLVSSPMDTVTEAGMAIAMALTGGIGFIHHNCT 80 (378)
T ss_dssp CBCHHHHTSSCCCCCGGGEEECCCCCCSCGGGCBCCEESSSSCEESSCEEECCCTTTCSHHHHHHHHHHTCEEEECCSSC
T ss_pred CCCHHHHHCCCCCCCCCCEEEECCCCCCCHHHCEEEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHCCCEEEECCCCC
T ss_conf 98978862568888844679847988776777562069887856899879799987388999999997899469769999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~e~~~~ev~~v~~~~~~p~~~~~~~~~l~v~aavg~~~~~~~~~~~l~~agv~vi~id~a~g~~~~~~~~i~~ik~~~~~ 160 (378)
T d1jr1a1 81 PEFQANEVRKVKKYEQYPLASKDAKKQLLCGAAIGTHEDDKYRLDLLALAGVDVVVLDSSQGNSIFQINMIKYMKEKYPN 160 (378)
T ss_dssp HHHHHHHHHHHHTSCCCTTCCBCTTSCBCCEEEECSSTHHHHHHHHHHHHTCCEEEECCSSCCSHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHEEHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
T ss_conf 99999887641104327643335546789999956687789999999751555576403676202357999999987899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~iIaGnVaT~e~a~~L~~aGAD~VkVGiG~Gs~ctTr~~tGvG~pq~sai~~~~~~a~~~~vpIIADGGi~~~gdiakA 240 (378)
T d1jr1a1 161 LQVIGGNVVTAAQAKNLIDAGVDALRVGMGCGSICITQEVLACGRPQATAVYKVSEYARRFGVPVIADGGIQNVGHIAKA 240 (378)
T ss_dssp CEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHH
T ss_pred CCEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEE
T ss_conf 72530220129999999982999786033135444454222347665202567887511569853425333547732468
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 la~GAd~VMmGs~fAgt~EspG~~~~~~g~~~k~~~gm~S~~a~~~~~~~~~~~~~~~~~~~~~eG~~~~v~~~G~v~~~ 320 (378)
T d1jr1a1 241 LALGASTVMMGSLLAATTEAPGEYFFSDGIRLKKYRGMGSLDAMDKHLSSQNRYFSEADKIKVAQGVSGAVQDKGSIHKF 320 (378)
T ss_dssp HHTTCSEEEESTTTTTBTTSSSCCEESSSCEEEEEECTTSTTTC----------------CCCCCBCEEEEECCBCHHHH
T ss_pred EEEECCEEEECCEEEEEECCCCCCCEECCCEEEECCCCCHHHHHHCCCCHHHHHCCCCCCCCCCCCCEEEECCCCCHHHH
T ss_conf 88605435532321342004675231468332312431045554401320332103345644787317850368778999
Q ss_pred ---------------------------------------------------------E
Q ss_conf ---------------------------------------------------------8
Q 002647 518 ---------------------------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~l~gglrs~m~y~G~~~l~e~~~~~~~~~~~f~~~t~~~~~e~~~h~~~~~~~~~~ 378 (378)
T d1jr1a1 321 VPYLIAGIQHSCQDIGAKSLTQVRAMMYSGELKFEKRTSSAQVEGGVHSLHSYEKRLF 378 (378)
T ss_dssp HHHHHHHHHHHHHHTTCSBHHHHHHHHHHSCSCEEECCHHHHHHHSCCSCSCCCCCCC
T ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEECHHHHHCCCCCCCCCCCCCCC
T ss_conf 9999999888652657573999975333577269998845301257875541012339
|
| >d1xqga_ e.1.1.1 (A:) Maspin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Serpins superfamily: Serpins family: Serpins domain: Maspin species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28492.49 Aligned_cols=1 Identities=0% Similarity=-0.028 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~~~~l~~a~~~Fa~~L~~~l~~~~~~~N~v~SP~si~~~L~~l~~Ga~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~ 80 (378)
T d1xqga_ 1 QGSMDALQLANSAFAVDLFKQLSEKEPLGNVLFSPIALSTSLSLAQVGAKGDTANEIGQVLHFENVKDVPFGFQTVTSDV 80 (378)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHHHSTTSCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHTTGGGCSSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 97678999999999999999987229798499888999999999998677589999999708998689999999999997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~l~~~~~l~~~~~~~~~~~f~~~~~~~y~~~v~~~dF~~~~~~~~~~IN~wv~~~T~g~i~~~~~~~~~~~~t 160 (378)
T d1xqga_ 81 NKLSSFYSLKLIKRLYVDKSLNLSTEFISSTKRPYAKELETVDFKDKLEETKGQINNSIKDLTDGHFENILADNSVNDQT 160 (378)
T ss_dssp HHHTTTSSEEEEEEEEEETTSCCCHHHHHHTTTTTTTCEEEECHHHHHHHHHHHHHHHHHHHTTTSCSCCSCTTSCCTTC
T ss_pred HCCCCCCEEEEEECHHHCCCCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 45467725887312022034532488998766323654686432440567789999999984158715456898989875
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~l~na~~f~~~W~~~F~~~~T~~~~F~~~~~~~~~v~mm~~~~~~~~~~~~~l~~~vv~Lp~~~~~~sm~iilP~~~~ 240 (378)
T d1xqga_ 161 KILVVNAAYFVGKWMKKFSESETKESPFRVNKTDTKPVQMMNMEATFSMGNIDSINSKIIELPFQNKHLSMFILLPKDVE 240 (378)
T ss_dssp CEEEEEEEEEECCBSSCCCGGGCEEEEEESSSSCEEEEEEEEEEEEEEEEEEGGGTEEEEEEEBGGGSSEEEEEEESSCC
T ss_pred EEEEEEEEEEEEEECCCCCCCCCEECCEECCCCCEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCC
T ss_conf 17888875886002278755652215501289955764123101426422206777389995058995789999567665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~L~~l~~~l~~~~l~~~~~~~~~~~~~v~l~lPkF~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~~~l~vs~ 320 (378)
T d1xqga_ 241 DESTGLEKIEKQLNSESLSQWTNPSTMANAKVKLSIPKFKVEKMIDPKASLENLGLKHIFSEDTSDFSGMSETKGVALSN 320 (378)
T ss_dssp SSSSSCHHHHHSCSHHHHHHHTCGGGCEEEEEEEEEECEEEEEEECTHHHHHHHTCCGGGCTTTCCCTTTCSCSSCCEEE
T ss_pred CCCCHHHHHHHHCCHHHHHHHHHHHHCEEEEEEEEEEEEEEEEEECHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 54433899998639889998743542534799998004899876255887775584000588877544577999923787
Q ss_pred ---------------------------------------------------------E
Q ss_conf ---------------------------------------------------------8
Q 002647 518 ---------------------------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------------------------a 518 (897)
=
T Consensus 321 i~qk~~i~vdE~G~~a~~~t~~~~~~~~~~f~~drPFlf~I~d~~t~~~Lf~G~v~~P 378 (378)
T d1xqga_ 321 VIHKVSLEITEDGGDSIEVPGARILQHKDELNADHPFIYIIRHNKTRNIIFFGKFSSP 378 (378)
T ss_dssp EEEEEEEEECSCBCCCCCCTTTTTSSCCCCCBCCSCEEEEEEETTTTEEEEEEEECCC
T ss_pred EEEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEECCCCCEEEEEEECCC
T ss_conf 6889999990685521223244457999879814998999999999978999993499
|
| >d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Animal alpha-amylase species: Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]
Probab=100.00 E-value=0 Score=28489.40 Aligned_cols=1 Identities=0% Similarity=-0.127 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~i~~~f~W~~~~i~~~~~~yl~~lG~tai~l~P~~e~~~~~~~~~~~~Y~~~dY~id~~~Gt~~df~~L 80 (378)
T d1jaea2 1 EKDANFASGRNSIVHLFEWKWNDIADECERFLQPQGFGGVQISPPNEYLVADGRPWWERYQPVSYIINTRSGDESAFTDM 80 (378)
T ss_dssp CCCCCCCTTCEEEEEETTCCHHHHHHHHHHTTTTTTEEEEECCCCSCBBCCTTCCGGGGGSBCCSCSEETTEEHHHHHHH
T ss_pred CCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHH
T ss_conf 99998879970699702574999999999999980998899092620678899877565678632268889999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 V~~aH~~GI~VilDvV~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dln~~n 160 (378)
T d1jaea2 81 TRRCNDAGVRIYVDAVINHMTGMNGVGTSGSSADHDGMNYPAVPYGSGDFHSPCEVNNYQDADNVRNCELVGLRDLNQGS 160 (378)
T ss_dssp HHHHHHTTCEEEEEECCSBCCSSCEEBTTSCEEBTTTTBBTTTTBCGGGBCCCCBCCCTTCHHHHHHSBBTTBCBBCTTS
T ss_pred HHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99998567244564034421244677766555688744476788876556899886777875433100014567103389
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 p~V~~~l~~~~~~w~e~gvDGfR~Daa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gE~~~~~~~~~~~~~~~~~~ 240 (378)
T d1jaea2 161 DYVRGVLIDYMNHMIDLGVAGFRVDAAKHMSPGDLSVIFSGLKNLNTDYGFADGARPFIYQEVIDLGGEAISKNEYTGFG 240 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEETTGGGSCHHHHHHHHHTCCCCCGGGTCCTTCCCEEEEECCCCSSSSCCGGGTTTSS
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHCCCCCCCCCHHCCCCC
T ss_conf 99999999999999985778446531112578787777776543132112444555404532001553200110103665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~Fl~NHD~~R~~~~~~~~~~~~~~~~lA~af~lt~p~G~P 320 (378)
T d1jaea2 241 CVLEFQFGVSLGNAFQGGNQLKNLANWGPEWGLLEGLDAVVFVDNHDNQRTGGSQILTYKNPKPYKMAIAFMLAHPYGTT 320 (378)
T ss_dssp EEECHHHHHHHHHHHTTTSCGGGGGGCSGGGTCCCGGGEEECSCCTTHHHHSCTTCCCTTSHHHHHHHHHHHHHSCSSEE
T ss_pred HHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEE
T ss_conf 00021332014554305762999999855440378540457624678777588763456898999999999998579887
Q ss_pred ---------------------------------------------------------E
Q ss_conf ---------------------------------------------------------8
Q 002647 518 ---------------------------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------------------------a 518 (897)
-
T Consensus 321 ~iy~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~w~~~~r~~~i~~m~~frn~~~ 378 (378)
T d1jaea2 321 RIMSSFDFTDNDQGPPQDGSGNLISPGINDDNTCSNGYVCEHRWRQVYGMVGFRNAVE 378 (378)
T ss_dssp EEEECBCCSSTTCCCCBCTTSCBCCCEECTTSCEETTBCCGGGSHHHHHHHHHHHHTT
T ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 8982365577777898888987778875866787878889989999999999866479
|
| >d1a59a_ a.103.1.1 (A:) Citrate synthase {Antarctic bacterium DS2-3R [TaxId: 56673]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Citrate synthase superfamily: Citrate synthase family: Citrate synthase domain: Citrate synthase species: Antarctic bacterium DS2-3R [TaxId: 56673]
Probab=100.00 E-value=0 Score=28419.84 Aligned_cols=1 Identities=0% Similarity=-0.394 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~GL~Gv~v~~s~IS~Idg~~G~L~YRG~~i~dLa~~~sfEEVa~LL~~G~lP~~~el~~f~~~l~~~~~lp~~~~ 80 (377)
T d1a59a_ 1 EPTIHKGLAGVTADVTAISKVNSDTNSLLYRGYPVQELAAKCSFEQVAYLLWNSELPNDSELKAFVNFERSHRKLDENVK 80 (377)
T ss_dssp CCCCCGGGTTCCCCCCSSEEEETTTTEEEETTEEHHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHTSCSCCHHHH
T ss_pred CCCCCCCCCCCEECEEECEEEECCCCEEEECCEEHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHH
T ss_conf 99889888998466075727858998799958439998714999999999978989499999999999998337986799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~l~~~p~~~~pm~~l~~~~s~l~~~~~~~~~~~~~~~~~~~~~lia~~~~i~a~~~r~~~g~~~~~p~~~~~~~~~~~~ 160 (377)
T d1a59a_ 81 GAIDLLSTACHPMDVARTAVSVLGANHARAQDSSPEANLEKAMSLLATFPSVVAYDQRRRRGEELIEPREDLDYSANFLW 160 (377)
T ss_dssp HHHTTSCTTSCHHHHHHHHHHHHHHTCTTTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTSCHHHHHHH
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
T ss_conf 99997302002113445555320344532344657777777777888899888877763268887789876256999987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~l~~~Lvl~aDHg~n~StfaaR~vaSt~~d~~~~~~a~~~al~Gp~hGga~~~~~~~l~~i~~~~~~ 240 (377)
T d1a59a_ 161 MTFGEEAAPEVVEAFNVSMILYAEHSFNASTFTARVITSTLADLHSAVTGAIGALKGPLHGGANEAVMHTFEEIGIRKDE 240 (377)
T ss_dssp HHHSSCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHHHHHHHHHHHSCCCSSC
T ss_pred HHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 62123320888877677876542477676236666664258514467787877603420111278999999998621566
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~v~~~l~~~~~i~GfGH~vy~~~DPR~~~l~~~~~~l~~~~~~~~~~~~~~~~e~~~~~~k~l~pNvD~ 320 (377)
T d1a59a_ 241 SLDEAATRSKAWMVDALAQKKKVMGFGHRVYKNGDSRVPTMKSALDAMIKHYDRPEMLGLYNGLEAAMEEAKQIKPNLDY 320 (377)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCCTTBCCSSCSSCCTTHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHHCCCBCTHH
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHH
T ss_conf 50266777899999998667866466874445667406777767777665412206677899999999971799978176
Q ss_pred --------------------------------------------------------E
Q ss_conf --------------------------------------------------------8
Q 002647 518 --------------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------------a 518 (897)
=
T Consensus 321 ~~~~l~~~lG~p~~~~~~lf~i~R~~G~~AH~~Eq~~~~~l~RP~~~Y~G~~~R~~p 377 (377)
T d1a59a_ 321 PAGPTYNLMGFDTEMFTPLFIAARITGWTAHIMEQVADNALIRPLSEYNGPEQRQVP 377 (377)
T ss_dssp HHHHHHHHTTCCGGGHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSCCCCCCC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCC
T ss_conf 999999996849667769999999999999999998579975746540389999897
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=0 Score=28418.58 Aligned_cols=1 Identities=0% Similarity=0.537 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
|
T Consensus 1 ~k~Ki~~v~GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~ 80 (377)
T d1o6ca_ 1 KKLKVMTVFGTRPEAIKMAPLVLELKKYPEIDSYVTVTAQHRQMLDQVLDAFHIKPDFDLNIMKERQTLAEITSNALVRL 80 (377)
T ss_dssp CCEEEEEEECSHHHHHHHHHHHHHGGGCTTEEEEEEECCSCGGGTHHHHHHTTCCCSEECCCCCTTCCHHHHHHHHHHHH
T ss_pred CCCEEEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHH
T ss_conf 98469999970585999999999997189998799993798899999985168777535443889988999999999850
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~kpD~v~v~GDr~e~la~a~aa~~~~Ipi~HiegG~~s~~~~~~~~de~~R~~iskls~~hf~~t~~~~~~L~~ 160 (377)
T d1o6ca_ 81 DELFKDIKPDIVLVHGDTTTTFAGSLAAFYHQIAVGHVEAGLRTGNKYSPFPEELNRQMTGAIADLHFAPTGQAKDNLLK 160 (377)
T ss_dssp HHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCCCCSCTTTTTTHHHHHHHHHHHCSEEEESSHHHHHHHHH
T ss_pred HHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCHHHHHHHHH
T ss_conf 56665336653676403454301566653114227999514565433234714554003565304886323466634433
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~G~~~~~I~~vG~~~~D~i~~~~~~~~~~~~~~~~~~~~~ilvt~Hr~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 240 (377)
T d1o6ca_ 161 ENKKADSIFVTGNTAIDALNTTVRDGYSHPVLDQVGEDKMILLTAHRRENLGEPMENMFKAIRRIVGEFEDVQVVYPVHL 240 (377)
T ss_dssp TTCCGGGEEECCCHHHHHHHHHCCSSCCCSTTTTTTTSEEEEECC----------HHHHHHHHHHHHHCTTEEEEEC---
T ss_pred HCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 03445427523420678888777777753334430578449998323101466337899998752123355653234552
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~llk~s~~vIgnSss~i~Ea~~lg~P~Inir~~tERqe~~~~g~nilv~~ 320 (377)
T d1o6ca_ 241 NPVVREAAHKHFGDSDRVHLIEPLEVIDFHNFAAKSHFILTDSGGVQEEAPSLGKPVLVLRDTTERPEGVEAGTLKLAGT 320 (377)
T ss_dssp -CHHHHHHHHC--CCSSEEECCCCCHHHHHHHHHHCSEEEEC--CHHHHGGGGTCCEEEECSCCC---CTTTTSSEEECS
T ss_pred CCCCCHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHEEECCCCHHHHHHHHHHCEEEEECCCCCCCCHHHCCEEEECCC
T ss_conf 11321122101345651475132136889999864225641640467766665414898078875822000680598789
Q ss_pred --------------------------------------------------------E
Q ss_conf --------------------------------------------------------8
Q 002647 518 --------------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~I~~~i~~~l~~~~~~~~~~~~~npYGdG~as~rI~~~L~~~~~~~k~~~~~~~ 377 (377)
T d1o6ca_ 321 DEENIYQLAKQLLTDPDEYKKMSQASNPYGDGEASRRIVEELLFHYGYRKEQPDSFT 377 (377)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHHCCCTTCCSCHHHHHHHHHHHHTTSCSCCCCCCC
T ss_pred CHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 999999999999749687763065889898982999999999985083336878999
|
| >d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Alanine-glyoxylate aminotransferase species: Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]
Probab=100.00 E-value=0 Score=28418.52 Aligned_cols=1 Identities=0% Similarity=-1.124 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~~~p~~~l~~PGP~~v~~~Vl~am~~~~~~hr~~ef~~i~~~~r~~l~~ll~~~~~~~i~~~g~gT~ 80 (377)
T d1vjoa_ 1 ISINDNQRLQLEPLEVPSRLLLGPGPSNAHPSVLQAMNVSPVGHLDPAFLALMDEIQSLLRYVWQTENPLTIAVSGTGTA 80 (377)
T ss_dssp CCCCCTTCCCCCSCCCCCCEECSSSCCCCCHHHHHHHSSCCCCTTSHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHH
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHH
T ss_conf 96473003446799987266610899789999999757688897888999999999999999859999809998484899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tg~~~ 160 (377)
T d1vjoa_ 81 AMEATIANAVEPGDVVLIGVAGYFGNRLVDMAGRYGADVRTISKPWGEVFSLEELRTALETHRPAILALVHAETSTGARQ 160 (377)
T ss_dssp HHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEEC
T ss_pred HHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEEECCCEEEE
T ss_conf 99999984334344420242001344444454320311100135778743202456666057640345554202334630
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~i~~i~~~~~~~g~~~~vDa~~~~g~~~~~~~~~~~d~~~~s~~K~~~gp~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (377)
T d1vjoa_ 161 PLEGVGELCREFGTLLLVDTVTSLGGVPIFLDAWGVDLAYSCSQKGLGCSPGASPFTMSSRAIEKLQRRRTKVANWYLDM 240 (377)
T ss_dssp CCTTHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTTCSCSSCEEEEECHHHHHHHHTCSSCCSCSTTCH
T ss_pred CHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCCCEEECC
T ss_conf 50554334552264389960002333321012456505640212440589779974132667765203589974011001
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~rs~~v~~~~~p~ 320 (377)
T d1vjoa_ 241 NLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDIGLSLHVEKEYRLPTLTTVCIPD 320 (377)
T ss_dssp HHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCT
T ss_pred CHHHHCCCCCCCCCCCCCEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHCCCEEEEEECCC
T ss_conf 10110257653346530142022257777666533725787888887654566664168546068276097499998999
Q ss_pred --------------------------------------------------------E
Q ss_conf --------------------------------------------------------8
Q 002647 518 --------------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~l~~~L~~~~gI~v~~G~~~~~~~~~Ris~~g~~~t~edi~~lv~al~~~l~ 377 (377)
T d1vjoa_ 321 GVDGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVLR 377 (377)
T ss_dssp TCCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHCCCEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 989999999998649999966862326998998267578999999999999999859
|
| >d2d5ja1 a.102.1.7 (A:1-377) Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 [TaxId: 84635]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: Glycosyl Hydrolase Family 88 domain: Unsaturated glucuronyl hydrolase species: Bacillus sp. GL1 [TaxId: 84635]
Probab=100.00 E-value=0 Score=28416.95 Aligned_cols=1 Identities=0% Similarity=-0.891 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~g~~~~~~~~~Wt~Gf~~G~lwl~ye~Tgd~~~~~~a~~~~~~~~~~~~~ 80 (377)
T d2d5ja1 1 MWQQAIGDALGITARNLKKFGDRFPHVSDGSNKYVLNDNTDWTDGFWSGILWLCYEYTGDEQYREGAVRTVASFRERLDR 80 (377)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCEEEEESSSSSEEEESSCSSCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 94899999999999988855101797748998377408983376479999999999869999999999999999975224
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~hd~Gf~~~~s~~~~y~~Tgd~~y~~~a~~~a~~L~~r~~~~~g~~~~w~~~~~~~~~~~~~iD~lm~~~~l~~~ 160 (377)
T d2d5ja1 81 FENLDHHDIGFLYSLSAKAQWIVEKDESARKLALDAADVLMRRWRADAGIIQAWGPKGDPENGGRIIIDCLLNLPLLLWA 160 (377)
T ss_dssp TTTCSSSTHHHHHHTTHHHHHHHHCCHHHHHHHHHHHHHHHTTEETTTTEECCSSSTTCTTTTTEEEGGGGGGHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 45566347631257679999987299989999999999999831867785435787888777766055125429999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~tgd~~y~~~A~~h~~~~~~~l~r~d~s~~~~~~~~~~tG~~~~~~t~qG~~~~s~WsRGqaW~i~gl~~~~~~t~~~ 240 (377)
T d2d5ja1 161 GEQTGDPEYRRVAEAHALKSRRFLVRGDDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNSRYLGNA 240 (377)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHTBBTTSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHCCH
T ss_conf 88509876999999999999998268899748898865899862578888788773167632199999999999983881
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~l~~a~~~a~~~l~~~~~dgi~~wd~~~p~~~~~~~DsSa~Ai~A~gll~L~~~~~~~~~~~~~Y~~~a~~i~~~l~~~ 320 (377)
T d2d5ja1 241 DLLETAKRMARHFLARVPEDGVVYWDFEVPQEPSSYRDSSASAITACGLLEIASQLDESDPERQRFIDAAKTTVTALRDG 320 (377)
T ss_dssp HHHHHHHHHHHHHHTTCCTTSCCBSBTTSCCCTTSCBCHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 78999999999999738877885321566678999877326789999999999852577267999999999999999876
Q ss_pred --------------------------------------------------------E
Q ss_conf --------------------------------------------------------8
Q 002647 518 --------------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~iygDYy~~Eal~r~~~~~~~~w~~~~~ 377 (377)
T d2d5ja1 321 YAERDDGEAEGFIRRGSYHVRGGISPDDYTIWGDYYYLEALLRLERGVTGYWYERGR 377 (377)
T ss_dssp TBCCCCSSCCCSBSCBCSBTTTTBSSSBCBHHHHHHHHHHHHHHHHCCCTTSSCTTC
T ss_pred HHCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 600689988844631635789999988673559999999999997388653745899
|
| >d1ci9a_ e.3.1.1 (A:) Esterase EstB {Burkholderia gladioli [TaxId: 28095]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: Esterase EstB species: Burkholderia gladioli [TaxId: 28095]
Probab=100.00 E-value=0 Score=28415.35 Aligned_cols=1 Identities=0% Similarity=-0.028 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~a~l~~~id~~~~~~~~~~~~pG~~~~V~~~g~~v~~~~~G~ad~~~~~~~~~~t~f~iaSvtK~~ta~~v~~Lve~G~l 80 (377)
T d1ci9a_ 1 AASLAARLDAVFDQALRERRLVGAVAIVARHGEILYRRAQGLADREAGRPMREDTLFRLASVTKPIVALAVLRLVARGEL 80 (377)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCSEEEEEEEETTEEEEEEEEEEEETTTTEECCTTCBEECGGGHHHHHHHHHHHHHHHTSS
T ss_pred CCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEEEEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCC
T ss_conf 94189999999999998289875999999999999998478624455988999986860326899999999999975996
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~ldd~v~~ylP~~~~~~~~~~~~~ITi~~Ll~htsGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (377)
T d1ci9a_ 81 ALDAPVTRWLPEFRPRLADGSEPLVTIHHLLTHTSGLGYWLLEGAGSVYDRLGISDGIDLRDFDLDENLRRLASAPLSFA 160 (377)
T ss_dssp CTTSBGGGTCTTCCCBCTTSCCCCCBHHHHHHTCSSCCCHHHHCTTSHHHHHTCCCSSSCCSSCHHHHHHHHHHSBCSSC
T ss_pred CCCCCCHHHHHHHHCCCCCCCCCCEEHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCC
T ss_conf 53322112331110134324577515013035532466633444113565540245665455899999999862888679
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 PG~~~~Ys~~~~lLg~iie~vtg~~~~~~~~e~i~~PLGm~~t~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (377)
T d1ci9a_ 161 PGSGWQYSLALDVLGAVVERATGQPLAAAVDALVAQPLGMRDCGFVSAEPERFAVPYHDGQPEPVRMRDGIEVPLPEGHG 240 (377)
T ss_dssp TTSCCCCCTHHHHHHHHHHHHHTSCHHHHHHHHTHHHHTCCSCBSCCSCGGGBCCCEECCSSSCEECCTTEEEECCTTSC
T ss_pred CCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99627607689999998763133203455467786213875343357826640000024677653134654345545666
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~g~gGl~sta~Dlarf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~G~~~~~~~~~ 320 (377)
T d1ci9a_ 241 AAVRFAPSRVFEPGAYPSGGAGMYGSADDVLRALEAIRANPGFLPETLADAARRDQAGVGAETRGPGWGFGYLSAVLDDP 320 (377)
T ss_dssp SEEEECGGGGGCTTSCCCTTTCCEECHHHHHHHHHHHHHCSSSSCHHHHHHHHSCSSCGGGCTTSTTEEECSSSEEESCH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEECEEEECCC
T ss_conf 54345763223645555677632235999999999765116787077876650102477766678971241011430376
Q ss_pred --------------------------------------------------------E
Q ss_conf --------------------------------------------------------8
Q 002647 518 --------------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------------a 518 (897)
+
T Consensus 321 ~~~~~~~~~g~~~h~G~~gt~~~idP~~~l~vv~ltN~~~~~~~~~~~~~l~~~vYa 377 (377)
T d1ci9a_ 321 AAAGTPQHAGTLQWGGVYGHSWFVDRALGLSVLLLTNTAYEGMSGPLTIALRDAVYA 377 (377)
T ss_dssp HHHTCSSCTTCEEEEETTTEEEEEEGGGTEEEEEEESEETHHHHSHHHHHHHHHHTC
T ss_pred CCCCCCCCCCCEECCCCCCEEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHCC
T ss_conf 535788999856626821418999944998999988489999875999999982189
|
| >d2i71a1 e.72.1.1 (A:1-377) Hypothetical protein SSO1389 {Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: SSO1389-like superfamily: SSO1389-like family: Cas DxTHG domain: Hypothetical protein SSO1389 species: Sulfolobus solfataricus [TaxId: 2287]
Probab=100.00 E-value=0 Score=28414.93 Aligned_cols=1 Identities=0% Similarity=-2.054 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 m~~l~ia~wG~p~~w~~~~Y~~~~~~~~~~~s~~~l~~~~~~d~~vi~~~dSl~~~~~~~~~d~~~~~~~~~~~~~~~l~ 80 (377)
T d2i71a1 1 MASIVFSTIGNPKGYQKVTYEIDGEKFESNVSVLALRDLLKVDKTVVILGISVADVYNCKYADYRSCKECIIQNSKNDLG 80 (377)
T ss_dssp CEEEEEEEESCTTCCCCEEEEETTEEEEESSHHHHHHHHTTCSEEEEEEEGGGGGGGTCCCSCHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEECCCCCCCEEEEEEECCCEEECCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 95499993478665728999978931204455999998747883999997301123468822799999999999998608
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~viv~P~vg~~f~g~~~~~~~~~~~~l~~~l~~~~~~eI~lD~thGiNy~~~~~~~a~~~~~~~~~~~~~~~~~l~~ 160 (377)
T d2i71a1 81 ISESYVVAPNVYQKFKGKPDHYFTYIYYHSLRILEKEGINEVFIDTTHGINYMGVLAKEAIQLAVSAYAAKSEKEVKVSL 160 (377)
T ss_dssp CCSCEEEECCCBTTEESCTHHHHHHHHHHHHHHHHHHTEEEEEEEEEECCTTHHHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCCEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 88449992797628856888999999999999850389868999777870059999999999999999974578744999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~nsdP~~~~~~~~~~I~~i~~~~i~p~~~~~~i~~~fl~~~k~~~~~~~ke~~~~i~~~~~al~~gl~lyL~~~~~~~~l 240 (377)
T d2i71a1 161 YNSDPVGKDVSDTVKLHEIEAIKISPLSGLKYVTYQILNKDKNFFNKIFSDSVNAIPRFATALDNGLFIYLSEKDSSLHL 240 (377)
T ss_dssp EECCCTTCCTTSEEECEEEEEEEECHHHHHHHHHHHHHTSCTTTTTTSSTTHHHHHHHHHHHHHTTCHHHHHHSCCHHHH
T ss_pred EECCCCCCCCCCCEEEEEECCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHH
T ss_conf 94776568887746999840126221466554303566667777678888888899999986540429999874022327
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~e~~~~~~~~~~~~e~~~~~~~~~~~~~y~~~~~~~~~~i~~~~~~~~l~~l~e~~~~~v~~~~i~~Ei~~i~~~~~~ 320 (377)
T d2i71a1 241 KRLEDDLSKDPLLTPSENEINVVYKDMKYALSHALFYVISRFSGNVDLDTLRHYAETYADKVTRAIIENEVDKIEKYQMG 320 (377)
T ss_dssp HHHHHHHHSCCEEEECSSCEEEECCCHHHHHHHHHHHHHGGGCSCEEHHHHHHHHHHHSCHHHHHHHHHHHHHHTTSCCC
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 88998630002330465312302330788999999998740230210899999998861356999999999988861477
Q ss_pred --------------------------------------------------------E
Q ss_conf --------------------------------------------------------8
Q 002647 518 --------------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~k~~~~~~~~~d~RNF~AHaGLe~nvt~vk~~~~~i~v~y~e~~~~i~~~l 377 (377)
T d2i71a1 321 SERKLLGEYMKVEGKGFDKRILYAHGGLPYAGTYVYKEKDKVYVTYGDKIDEIERQI 377 (377)
T ss_dssp SSCEEGGGTC---------CHHHHTTTCCTTTCEEEEETTEEEEECGGGHHHHHHHC
T ss_pred CCHHHHHHHHHHCCCCCCCCCEEECCCCCCCEEEEEECCCEEEEEHHHHHHHHHHCC
T ss_conf 760478886310147885300100348652729999669889998787599998419
|
| >d1jmma_ b.30.6.1 (A:) V-region of surface antigen I/II (SA I/II, PAC) {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Supersandwich superfamily: V-region of surface antigen I/II (SA I/II, PAC) family: V-region of surface antigen I/II (SA I/II, PAC) domain: V-region of surface antigen I/II (SA I/II, PAC) species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=0 Score=28414.91 Aligned_cols=1 Identities=0% Similarity=-0.592 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~kdla~Y~~~l~~Y~~e~~~y~~alae~ek~KnedGyl~~p~aQ~LvF~~Ep~A~~ti~~~gk~~~a~~~~~~~~~~~~~ 80 (377)
T d1jmma_ 1 QKDLADYPVKLKAYEDEQASIKAALAELEKHKNEDGNLTEPSAQNLVYDLEPNANLSLTTDGKFLKASAVDDAFSKSTSK 80 (377)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTSTTSBSSCCCBCEECSCCTTCEEEEEESSEEECHHHHHHHHHSGGGH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCCHHHHHHHHCCCCCH
T ss_conf 94077889999999999999999999998740556663640145414316787268885255311301112233044303
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~v~l~kg~~vtvTYtNL~nSsynGKKI 160 (377)
T d1jmma_ 81 AKYVQKILQLDDLDITNLEQSNDVASSMELYGNFGDKAGWSTTVSNNSQVKWGSVLLERGQSATATYTNLQNSYYNGKKI 160 (377)
T ss_dssp HHHHTTEECGGGCCGGGGCSGGGEESSCCEEETTSTTSSCEETTTBTSCCEEEEEEECTTCEEEEEEECCSSCEETTEEE
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCEE
T ss_conf 33101010223443224333322000002355555445501024567753025699617998999962754442178323
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 sKvvytYtl~~s~s~~g~~i~~~l~~DPT~t~f~~~~~g~~~~~~~~~v~~~vkFYDe~G~~i~~~~Al~S~sSLN~~~~ 240 (377)
T d1jmma_ 161 SKIVYKYTVDPKSKFQGQKVWLGIFTDPTLGVFASAYTGQVEKNTSIFIKNEFTFYDEDGKPINFDNALLSVASLNREHN 240 (377)
T ss_dssp EEEEEEEEECTTCCCSSSCEEEEEESSGGGCEEEECCCSSCBSSCEEEEEEEEEEEETTSCBCCEEEEEEEECCCCBCSS
T ss_pred EEEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCEECCCCCEEEEECCCCCCC
T ss_conf 69999999555788888624689815995279998512666656643899999999789989226602687410258998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~iE~V~~~ng~fv~I~GSSV~~~~g~~ya~~~~~~~~~~~Gsr~~~~~~~~~~s~WD~~~s~~ayYGA~v~~~~g~~~~~ 320 (377)
T d1jmma_ 241 SIEMAKDYSGKFVKISGSSIGEKNGMIYATDTLNFKQGEGGSRWTMYKNSQAGSGWDSSDAPNSWYGAGAIKMSGPNNHV 320 (377)
T ss_dssp EEEEEESCSSEEECBTTCSEEEETTEEEECSSCCSSTTSTTCSSCSSCCSSTTCCCCSSSCTTGGGGCEEEEEEESCEEE
T ss_pred CEEEEECCCCEEEEECCCEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEE
T ss_conf 46899748971899579766865994772677432346676421223467766787778997631123778970895489
Q ss_pred --------------------------------------------------------E
Q ss_conf --------------------------------------------------------8
Q 002647 518 --------------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------------a 518 (897)
+
T Consensus 321 t~g~~~a~~~~~~~~~~~~~~~d~~~~~~~~iWfa~ns~i~a~~vp~~~~e~Pt~P~ 377 (377)
T d1jmma_ 321 TVGATSATNVMPVSDMPVVPGKDNTDGKKPNIWYSLNGKIRAVNVPKVTKEKPTPPV 377 (377)
T ss_dssp EEEEEEGGGTSCGGGSCCCTTCCTTCCBCSEEEECCBSCCCSSSCCBCCCCCCCCCC
T ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 970455432246644455666655567776231674378765458999987899989
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=100.00 E-value=0 Score=28414.74 Aligned_cols=1 Identities=0% Similarity=-0.161 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~y~~e~h~v~t~DG~~l~~~ri~~~~~~~~~~~~~~~vlllHG~~~~~~~~~~~~~~ 80 (377)
T d1k8qa_ 1 AFGKLHPTNPEVTMNISQMITYWGYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPN 80 (377)
T ss_dssp CCCBSSCCCGGGGCCHHHHHHHTTCCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTT
T ss_pred CCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCHHHHHHCCCC
T ss_conf 97667789987677889999984998558999817999898998468888876689989089989996314677442752
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~sla~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~i~~i~~~~g~~~v~lvGhS~GG~ia~ 160 (377)
T d1k8qa_ 81 NSLAFILADAGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGF 160 (377)
T ss_dssp TCHHHHHHHTTCEEEECCCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHH
T ss_pred CHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHH
T ss_conf 06999999879989998089988888887778752220137799984341799999999972999879997332699999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~a~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (377)
T d1k8qa_ 161 IAFSTNPKLAKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNAL 240 (377)
T ss_dssp HHHHHCHHHHTTEEEEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 99986323320004675214544444114678998750136666642000114046777765431022034667877655
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~vPvL~i~ 320 (377)
T d1k8qa_ 241 FIICGFDTMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWN 320 (377)
T ss_dssp HHHHCCCGGGSCGGGHHHHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEE
T ss_pred HHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEE
T ss_conf 42037771114677766666315553359999999999753741220330345556651345751222754899989999
Q ss_pred --------------------------------------------------------E
Q ss_conf --------------------------------------------------------8
Q 002647 518 --------------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------------a 518 (897)
-
T Consensus 321 G~~D~~~~~~~~~~l~~~lp~~~~~~~i~~~GH~d~~~~~~a~~~v~~~I~~fl~~~ 377 (377)
T d1k8qa_ 321 GGNDLLADPHDVDLLLSKLPNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGTD 377 (377)
T ss_dssp ETTCSSSCHHHHHHHHTTCTTEEEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHTC
T ss_pred ECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCCHHHHHHHHHHHHHHCC
T ss_conf 589972289999999997799759999699988303424454999999999997229
|
| >d1nm8a1 c.43.1.3 (A:9-385) Carnitine acetyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-dependent acyltransferases superfamily: CoA-dependent acyltransferases family: Choline/Carnitine O-acyltransferase domain: Carnitine acetyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28417.28 Aligned_cols=1 Identities=0% Similarity=0.238 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~Q~sLP~LPvP~L~~Tl~ryL~s~kPl~s~ee~~~t~~~v~~F~~~~g~G~~Lq~~L~~~~~~~~nwl~~~W~~~~YL~ 80 (377)
T d1nm8a1 1 HHTDPLPRLPVPPLQQSLDHYLKALQPIVSEEEWAHTKQLVDEFQASGGVGERLQKGLERRARKTENWLSEWWLKTAYLQ 80 (377)
T ss_dssp CCCCCCCCCCCCCHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHSSSTTHHHHHHHHTTT
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
T ss_conf 96567998999999999999999865149999999999999998736860799999999975147773468899886435
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~R~pl~~~~n~~~~~~~~~~~~~~~q~~rAA~l~~~~l~f~~~l~~~~l~~~~~~~~plcM~qy~~lF~t~RiP~~~~D~ 160 (377)
T d1nm8a1 81 YRQPVVIYSSPGVMLPKQDFVDLQGQLRFAAKLIEGVLDFKVMIDNETLPVEYLGGKPLCMNQYYQILSSCRVPGPKQDT 160 (377)
T ss_dssp CCSCSBTTTBCEEECCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCEETTEECCCGGGGGTTTEEEECCSSSCE
T ss_pred CCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEECHHHHHHHCCCEECCCCCCCC
T ss_conf 88785466766300267777760679999999999999999998728778656589944189998761765068999883
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 l~~~~~~~~~~~HIvV~~~g~~ykv~v~d~~g~~ls~~ei~~~l~~I~~~~~~~~~~~vg~LTt~~Rd~Wa~~r~~L~~~ 240 (377)
T d1nm8a1 161 VSNFSKTKKPPTHITVVHNYQFFELDVYHSDGTPLTADQIFVQLEKIWNSSLQTNKEPVGILTSNHRNSWAKAYNTLIKD 240 (377)
T ss_dssp EEECTTSSSCCCEEEEEETTEEEEEECBCTTSCBCCHHHHHHHHHHHHHTCCCCCSCCGGGGGGSCHHHHHHHHHHHTTS
T ss_pred CCCCCCCCCCCCEEEEEECCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
T ss_conf 20057778888769999899899999988999899899999999999961104688886405678728999999998608
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~N~~~L~~Iesalfvv~LDd~~p~~~~e~~~~~~~~~~lhG~g~~~~~~NRW~DKs~q~IV~~nG~~g~~~EHS~~DG~ 320 (377)
T d1nm8a1 241 KVNRDSVRSIQKSIFTVCLDATMPRVSEDVYRSHVAGQMLHGGGSRLNSGNRWFDKTLQFIVAEDGSCGLVYEHAAAEGP 320 (377)
T ss_dssp HHHHHHHHHHHHSSCEEEEECCCSCCCSTTHHHHHHHHHHHCSCTTTTTTSCCTTBSEEEEEETTSCEEEEECTTSCCHH
T ss_pred CHHHHHHHHHHHCEEEEEECCCCCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCHH
T ss_conf 60799999997547888833788888613666666555033687557987726665517999789877862267761289
Q ss_pred --------------------------------------------------------E
Q ss_conf --------------------------------------------------------8
Q 002647 518 --------------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------------a 518 (897)
-
T Consensus 321 ~v~~~~~~v~~~~~~~~~~~~~~~~~~~p~~L~f~l~~~i~~~I~~a~~~~~~li~D 377 (377)
T d1nm8a1 321 PIVTLLDYVIEYTKKPELVRSPMVPLPMPKKLRFNITPEIKSDIEKAKQNLSIMIQD 377 (377)
T ss_dssp HHHHHHHHHHHHHHSCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCC
T ss_conf 999999999987234666788778899975878976989999999999999998259
|
| >d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Aminotransferase ArnB species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=0 Score=28343.53 Aligned_cols=1 Identities=100% Similarity=2.098 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~ip~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~E~~la~~~g~~~ai~~~sgt~Al~~al~al~~~~gdeVi~~~~~ 80 (376)
T d1mdoa_ 1 DFLPFSRPAMGAEELAAVKTVLDSGWITTGPKNQELEAAFCRLTGNQYAVAVSSATAGMHIALMALGIGEGDEVITPSMT 80 (376)
T ss_dssp CCBCSCCCCCCHHHHHHHHHHHHHTCCSSSHHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSS
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf 98668999999999999999996699768977999999999998819599968889999999998089998989872343
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~ai~~~g~~pv~~d~~~~~~~~d~~~l~~~i~~~tkaIi~~h~~G~~~~~~~i~~i~~~~~i~vIeD~a~a~g~~ 160 (376)
T d1mdoa_ 81 WVSTLNMIVLLGANPVMVDVDRDTLMVTPEHIEAAITPQTKAIIPVHYAGAPADLDAIYALGERYGIPVIEDAAHATGTS 160 (376)
T ss_dssp CHHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTTEEEECCBCGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCE
T ss_pred CCCCCCCHHCCCCCEEEECCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEECCCHHCCCE
T ss_conf 42110001103431244114433347899999975478981999867888715333899988741946996464310674
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~g~~g~~~~Sf~~~K~l~~g~GG~i~t~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~n~~~~~~~ 240 (376)
T d1mdoa_ 161 YKGRHIGARGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLN 240 (376)
T ss_dssp ETTEETTSSSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTEECC-----------CCEESSCCCBCCCCHHH
T ss_pred ECCEECCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCHHH
T ss_conf 68820466657664278867787788888997125679998764036876443332233323311000012353440145
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 Aai~~~qL~~~~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rd~l~~~L~~~gI~~~~ 320 (376)
T d1mdoa_ 241 AAIALAQLQKLDALNARRAAIAAQYHQAMADLPFQPLSLPSWEHIHAWHLFIIRVDEARCGITRDALMASLKTKGIGTGL 320 (376)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTSSCEECCCCSSCEECCCSCEEEECCHHHHSSCHHHHHHHHHHTTBCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
T ss_conf 66655433333579999866534554311465433221234444544332222220002133399999999987998465
Q ss_pred -------------------------------------------------------E
Q ss_conf -------------------------------------------------------8
Q 002647 518 -------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------a 518 (897)
|
T Consensus 321 ~y~~~~~~~~~~~~~~~~~~p~a~~~~~~~i~LP~~~~lt~~ei~~I~~~i~~i~~ 376 (376)
T d1mdoa_ 321 HFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQIAG 376 (376)
T ss_dssp CCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred ECCCHHCCHHHHHHCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 78532308998952887898799999859798448999999999999999999729
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=28341.08 Aligned_cols=1 Identities=0% Similarity=-2.021 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 MKi~~v~GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (376)
T d1f6da_ 1 MKVLTVFGTRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLFSIVPDYDLNIMQPGQGLTEITCRILEGLKP 80 (376)
T ss_dssp CEEEEEECSHHHHHHHHHHHHHHHHCTTCEEEEEECCTTGGGGHHHHHHTTCCCSEECCCCSSSSCHHHHHHHHHHHHHH
T ss_pred CEEEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 96999998267399999999999738998779999088989999999862878774400488999899999999986478
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~kPD~v~v~GDr~e~la~a~aa~~~~ipi~HiegG~~s~~~~~~~pde~~R~~iskls~~hf~~~~~~~~~L~~~G 160 (376)
T d1f6da_ 81 ILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRTGDLYSPWPEEANRTLTGHLAMYHFSPTETSRQNLLREN 160 (376)
T ss_dssp HHHHHCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCCCSCTTSSTTHHHHHHHHHHTCSEEEESSHHHHHHHHHTT
T ss_pred HHHHCCCCCEEEECCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHCC
T ss_conf 89745676224310344313689998740753899852446542000474066554203200488743478886877518
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~I~~vG~~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilvt~H~~~~~~~~~~~i~~~l~~~~~~~~~~~ 240 (376)
T d1f6da_ 161 VADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGRGFEEICHALADIATTHQDIQ 240 (376)
T ss_dssp CCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEECCCCBSSCCHHHHHHHHHHHHHHHHCTTEE
T ss_pred CCCCCCCEECCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_conf 98653412167248788887765423512321111022334777766998335411112009999999865434214047
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ii~p~~~~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~ll~~a~~vignSssgi~Ea~~lg~P~Inir~~ter~~~~~~g 320 (376)
T d1f6da_ 241 IVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWLILTDSGGIQEEAPSLGKPVLVMRDTTERPEAVTAG 320 (376)
T ss_dssp EEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSEEEESSSGGGGTGGGGTCCEEECSSCCSCHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHCEEEEECCCCHHHHHHHHCCCEEECCCCCCCCCCEECC
T ss_conf 85254432124446766640444513323556789999984163998368506766787489889727876576412368
Q ss_pred -------------------------------------------------------E
Q ss_conf -------------------------------------------------------8
Q 002647 518 -------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~i~v~~~~~~I~~ai~~~l~~~~~~~~~~~~~npYGdG~as~rI~~iLk~~~i~~ 376 (376)
T d1f6da_ 321 TVRLVGTDKQRIVEEVTRLLKDENEYQAMSRAHNPYGDGQACSRILEALKNNRISL 376 (376)
T ss_dssp SEEECCSSHHHHHHHHHHHHHCHHHHHHHHHSCCTTCCSCHHHHHHHHHHHTCCCC
T ss_pred EEEECCCCHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 06987899999999999997285766530457898989849999999998568999
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=100.00 E-value=0 Score=28340.04 Aligned_cols=1 Identities=0% Similarity=-0.227 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~i~~F~le~G~~l~~~~laY~t~G~ln~~~~NaVlv~h~ltg~~~~~~WW~~liG~g~alDt~kyfV 80 (376)
T d2vata1 1 NRFEASLDAQDIARISLFTLESGVILRDVPVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFI 80 (376)
T ss_dssp CHHHHTSCCCEEEEEEEEECTTSCEEEEEEEEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEE
T ss_pred CCHHHCCCCCCEEEECCEEECCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCEEE
T ss_conf 93220345475375376782799885895699996256488899889984887677021234887077998637463389
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 I~~n~lG~~~gst~p~s~~p~~~~~~~yg~~FP~~ti~D~v~aq~~ll~~LGI~~l~aViG~SmGGmqal~wa~~~Pd~v 160 (376)
T d2vata1 81 ICLNYLGSPFGSAGPCSPDPDAEGQRPYGAKFPRTTIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYV 160 (376)
T ss_dssp EEECCTTCSSSSSSTTSBCTTTC--CBCGGGCCCCCHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTTTB
T ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCHHHH
T ss_conf 98346788767888877896212377545568852057889999999987386617886134278899999998361777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~li~Ia~~~~~s~~~~a~~~~~~~ai~~Dp~w~~G~Y~~~~~p~~GL~~Ar~~~~~ty~S~~~~~~rf~~~~~~~~gr~ 240 (376)
T d2vata1 161 RKIVPIATSCRQSGWCAAWFETQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRN 240 (376)
T ss_dssp CCEEEESCCSBCCHHHHHHHHHHHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC----
T ss_pred HHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC
T ss_conf 52312356523455778888999987422212457775433116789999999999984599999999723224422200
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vesyL~~~g~k~~~rfDansyl~l~~a~d~~Di~~~~~g~l~~aL~~I~a~~L 320 (376)
T d2vata1 241 ISSQDAKKEINGTDSGNSHRAGQPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPAL 320 (376)
T ss_dssp -----------------------CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEE
T ss_pred CCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEE
T ss_conf 01000111013444332222343156799999987765530555012899999998503333338899999850899989
Q ss_pred -------------------------------------------------------E
Q ss_conf -------------------------------------------------------8
Q 002647 518 -------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------a 518 (897)
-
T Consensus 321 vI~~~sD~lFPp~~~~e~a~~l~~a~~~~I~S~~GHDaFL~e~~~~~~~I~~FL~q 376 (376)
T d2vata1 321 IICARSDGLYSFDEHVEMGRSIPNSRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQ 376 (376)
T ss_dssp EEECTTCSSSCHHHHHHHHHHSTTEEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC
T ss_pred EEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCC
T ss_conf 99868420849999999998627874999899988652266999999999999748
|
| >d1k9oi_ e.1.1.1 (I:) Alaserpin (serpin 1) {Tobacco hornworm (Manduca sexta) [TaxId: 7130]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Serpins superfamily: Serpins family: Serpins domain: Alaserpin (serpin 1) species: Tobacco hornworm (Manduca sexta) [TaxId: 7130]
Probab=100.00 E-value=0 Score=28339.31 Aligned_cols=1 Identities=0% Similarity=-0.858 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 g~~~~~~~l~~~~~~F~~~l~~~~~~~~~~~N~v~SP~si~~~La~l~~ga~g~T~~el~~~L~~~~~~~~~~~~~~l~~ 80 (376)
T d1k9oi_ 1 GETDLQKILRESNDQFTAQMFSEVVKANPGQNVVLSAFSVLPPLGQLALASVGESHDELLRALALPNDNVTKDVFADLNR 80 (376)
T ss_dssp CTHHHHTTHHHHHHHHHHHHHHHHHTTSTTSCEEECSGGGHHHHHHHTTTBCTHHHHHHHHHTTCSCTTHHHHHHHHHTS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 98558999999999999999999983298981998889999999999986673899999997099985457999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~i~~~~~~~~~~~f~~~~~~~y~~~~~~vdf~~~~~a~~~IN~wv~~~T~g~I~~~~~~~~l~~~~ 160 (376)
T d1k9oi_ 81 GVRAVKGVDLKMASKIYVAKGLELNDDFAAVSRDVFGSEVQNVDFVKSVEAAGAINKWVEDQTNNRIKNLVDPDALDETT 160 (376)
T ss_dssp SCSCCSSBCCEEEEEEEEESSCCBCSGGGSTTTSSSCCCEEEECTTSHHHHHHHHHHHHHHHTTTSSCCCSCGGGCCTTC
T ss_pred HHHHCCCCCEEEEEEHHHHCCCCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCH
T ss_conf 87536798578854002304887166899998752286554245555699999999999986378221006877899501
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~lvna~~f~~~W~~~F~~~~t~~~~F~~~~~~~~~v~~m~~~~~~~~~~~~~l~~~vveLP~~~~~~sm~iilP~~~~ 240 (376)
T d1k9oi_ 161 RSVLVNAIYFKGSWKDKFVKERTMDRDFHVSKDKTIKVPTMIGKKDVRYADVPELDAKMIEMSYEGDQASMIIILPNQVD 240 (376)
T ss_dssp CEEEEEEEEEEBCBSSCCCGGGCEEEEECSSSSCCEEEEEEEEEEEEEEEEETTTTEEEEEEEBGGGSEEEEEEEESSTT
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEEECCCCC
T ss_conf 45665515655422278883233513053279926999723421417887507798799996237993699999668776
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~l~~~~~~l~~~~~~~~~~~~~~~~~v~v~lPkF~i~~~~~l~~~L~~lGl~~~F~~~~ad~s~~~~~~~~l~vs~v~q~ 320 (376)
T d1k9oi_ 241 GITALEQKLKDPKALSRAEERLYNTEVEITLPKFKIETTTDLKEVLSNMNIKKLFTPGAARLENLLKTKESLTVDAAIQK 320 (376)
T ss_dssp THHHHHHHTTSTTTTTTTTTSCEEEEEEEEEECEEEEEEEEHHHHHHTTTCCSTTSTTTSCBTTTBSSCCCCCCSEEEEE
T ss_pred CHHHHHHHHCCHHHHHHHHHHCCCEEEEEEEEEEEEEEEECHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEE
T ss_conf 63578864225346899875151228999843589752212788765438754357652312356588998788736877
Q ss_pred -------------------------------------------------------E
Q ss_conf -------------------------------------------------------8
Q 002647 518 -------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------a 518 (897)
=
T Consensus 321 ~~ievdE~G~~a~a~t~~~~~~~~~~~~~~f~~drPF~f~I~~~~~~lf~G~v~~P 376 (376)
T d1k9oi_ 321 AFIEVNEEGAEAAAANAFGIVPKSLILYPEVHIDRPFYFELKIDGIPMFNGKVIEP 376 (376)
T ss_dssp EEEEECSCBSSCSSSCCSSSEESCCCCCCEEECCSCEEEEEEESSSEEEEEEESCC
T ss_pred EEEEECCCCEEEECCCCEEEECCCCCCCCEEEEECCEEEEEEECCEEEEEEEECCC
T ss_conf 89999987116001432344116788897599648979999979969999994288
|
| >d1eg5a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: NifS-like protein/selenocysteine lyase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=28338.35 Aligned_cols=1 Identities=0% Similarity=-2.021 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~iyld~a~~~~~p~~v~ea~~~~~~~~~~np~~~~~~~~~~~~~~~~aR~~ia~l~~~~~~~i~~~~~~T~~l~~~~~~ 80 (376)
T d1eg5a_ 1 MRVYFDNNATTRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKT 80 (376)
T ss_dssp CCEECBTTTCCCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHHHH
T ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHC
T ss_conf 97988786316699999999999998748987654699999999999999999998098978099979878997766621
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~v~~vp~~~~~~id~~~l~~~i~~~t~lv~is~v~~~tG~~~~~~~ 160 (376)
T d1eg5a_ 81 VAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDEDTFLVSIMAANNEVGTIQPVED 160 (376)
T ss_dssp HHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCHHH
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCEECHHHHHHHCCCCCEEEEEECCCCCCCEEEEEHH
T ss_conf 44332235763223432220128999999866988999768988727789999864899608999777665412554124
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 i~~~~~~~~~~~~~~vD~~q~~g~~~~d~~~~~~D~~~~s~~K~~gp~G~~~l~~~~~~~~~p~~~g~~~~~~~~~~~~~ 240 (376)
T d1eg5a_ 161 VTRIVKKKNKETLVHVDAVQTIGKIPFSLEKLEVDYASFSAHKFHGPKGVGITYIRKGVPIRPLIHGGGQERGLRSGTQN 240 (376)
T ss_dssp HHHHHHHHCTTCEEEEECTTTTTTSCCCCTTTCCSEEEEEGGGGTSCTTCEEEEECTTSCCCCSBCSSCTTTTTBCSCCC
T ss_pred HHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCEECCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 44554311467504787531246545520004865000125434357886268852576658720189875445477664
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~vr~ 320 (376)
T d1eg5a_ 241 VPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMNLGAHIITPLEISLPNTLSVSFPNIRGSTLQNLLSGYGIYVST 320 (376)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTCEECSCTTSBCTTEEEEECTTCCHHHHHHHHHHTTEECBC
T ss_pred CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCEEEEC
T ss_conf 02456677775402210246666666543200012331011123433211256023225997999999988559908967
Q ss_pred -------------------------------------------------------E
Q ss_conf -------------------------------------------------------8
Q 002647 518 -------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------a 518 (897)
-
T Consensus 321 G~~c~~~~~~~~~~l~~~gi~~~~~~~~iRiS~~~ynt~edid~l~~~L~~iv~~l 376 (376)
T d1eg5a_ 321 SSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSFL 376 (376)
T ss_dssp ------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred CCHHCCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 61103886206699997399834479889996589899999999999999999639
|
| >d2v3qa1 c.94.1.1 (A:1-376) PstS-like phosphate-binding protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Periplasmic binding protein-like II superfamily: Periplasmic binding protein-like II family: Phosphate binding protein-like domain: PstS-like phosphate-binding protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28336.77 Aligned_cols=1 Identities=0% Similarity=-0.427 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~i~gaGat~p~p~~~~~~~~~~~~~~y~~~GSG~G~~~~~~g~~~~~~~~~~~tvdfa~sd~~l~~~E~~~~~~~~~~~~ 80 (376)
T d2v3qa1 1 DINGGGATLPQKLYLTPDVLTAGFAPYIGVGSGKGKIAFLENKYNQFGTDTTKNVHWAGSDSKLTATELATYAADKEPGW 80 (376)
T ss_dssp CBCEEECSTTHHHHTSTTTSCTTBCCCEECCHHHHHHHHHHTCGGGTCSCTTSCCCEEEESSCCCHHHHHHHHHHTHHHH
T ss_pred CCEEEEHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCC
T ss_conf 93215222799999998763596789956576899999963886444556546771353477789999988774066777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~v~iPv~~~~Iai~~N~~~~~~l~Lt~~~L~~If~G~It~Wnd~~i~~p~~~I~vv~R~d~SGTt~~Ft~~L~~~~~~ 160 (376)
T d2v3qa1 81 GKLIQVPSVATSVAIPFRKAGANAVDLSVKELCGVFSGRIADWSGITGAGRSGPIQVVYRAESSGTTELFTRFLNAKCTT 160 (376)
T ss_dssp CCEEEEEEEEEECBCBBCCCCSSCCEECHHHHHHHHHTSCCBGGGSTTSCCCSBCEEEEESSCCHHHHHHHHHHHHHCCS
T ss_pred CCEEEEEEEEEEEEEEEECCCCHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCC
T ss_conf 86289747764479987347625543479999843337623001135457677854784489986078889988652755
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~g~~~~~~~~~~~~~~~~~~~~~a~gs~gv~~~v~~~~~~~gaIGY~~~~ya~~~~~~l~~~~~~~~~~~~~~~~~ 240 (376)
T d2v3qa1 161 EPGTFAVTTTFANSYSLGLTPLAGAVAATGSDGVMAALNDTTVAEGRITYISPDFAAPTLAGLDDATKVARVGKGVVNGV 240 (376)
T ss_dssp SSSCBCCCSCGGGTBTTCSTTSTTCEEESHHHHHHHHHHCTTSCSCEECCBCHHHHSSSGGGGGCTTTBCEECCEEETTE
T ss_pred CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCHHHHHCCCCCCEEECC
T ss_conf 32234643102332245677677650003573087887540477765444430100022222103332024453000035
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~v~pt~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~YPI~~~~y~~~~~~~~~~~~~~~vk~Fl 320 (376)
T d2v3qa1 241 AVEGKSPAAANVSAAISVVPLPAAADRGNPDVWVPVFGATTGGGVVAYPDSGYPILGFTNLIFSQCYANATQTGQVRDFF 320 (376)
T ss_dssp EECCBCCCTHHHHHHHHTCCCCCGGGTTCGGGGSCEEESSCBTTEEECCSSSCSCEEEEEEEEESCBSSHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHEEEECCCCCCHHHHHHHHHH
T ss_conf 66621245888997651144554344566532223334322001357888851112111100002368700159999999
Q ss_pred -------------------------------------------------------E
Q ss_conf -------------------------------------------------------8
Q 002647 518 -------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~l~~~~~gq~~~~~~GyvPLp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (376)
T d2v3qa1 321 TKHYGTSANNDAAIEANAFVPLPSNWKAAVRASFLTASNALSIGNTNVCNGKGRPQ 376 (376)
T ss_dssp HHHTCSSSSSHHHHHHTTCBCCCHHHHHHHHHHHTSTTSTTSTTCHHHHTTCCBCC
T ss_pred HHHHHCCCCHHHHHHHCCCEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf 99860553257889978974399999999999986225420227864367788999
|
| >d1wu4a1 a.102.1.2 (A:6-381) Xylanase Y {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: Cellulases catalytic domain domain: Xylanase Y species: Bacillus halodurans [TaxId: 86665]
Probab=100.00 E-value=0 Score=28336.04 Aligned_cols=1 Identities=0% Similarity=-0.394 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~g~~~~~~y~n~~~~~g~~q~~~~~k~~~~~~~~f~~~~~~~~y~~~~~~~~yv~d~~n~dv~SEGqgYGMl~Av~~~dr 80 (376)
T d1wu4a1 1 EGAFYTREYRNLFKEFGYSEAEIQERVKDTWEQLFGDNPETKIYYEVGDDLGYLLDTGNLDVRTEGMSYGMMMAVQMDRK 80 (376)
T ss_dssp CCHHHHCCCCCHHHHTTCCHHHHHHHHHHHHHHHHSSCC--CCEEEETTTEEEECBTTTTBEEHHHHHHHHHHHHHTTCH
T ss_pred CCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCH
T ss_conf 99764675552888828899999999999999981689766189971798558766799985556799999999980999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~FD~lw~wt~~~l~~~d~~~~~L~aW~~~~~g~v~d~n~AtDgDl~iA~ALl~A~~~Wg~~~~~~~~Y~~~A~~il~~i 160 (376)
T d1wu4a1 81 DIFDRIWNWTMKNMYMTEGVHAGYFAWSCQPDGTKNSWGPAPDGEEYFALALFFASHRWGDGDEQPFNYSEQARKLLHTC 160 (376)
T ss_dssp HHHHHHHHHHHHHTBCCSSTTTTSBCSEECTTSCBSCSCCCHHHHHHHHHHHHHHHHHHCCCSSTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
T ss_conf 99999999999985367777666715336799997889988767999999999999874887533356999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~nPSY~~P~~~~~fa~~a~~~~~~~W~~~~~~s~~ll~~~~~~~tGL~PDw~ 240 (376)
T d1wu4a1 161 VHNGEGGPGHPMWNRDNKLIKFIPEVEFSDPSYHLPHFYELFSLWANEEDRVFWKEAAEASREYLKIACHPETGLAPEYA 240 (376)
T ss_dssp HHTTSSSSCCCSBCTTTCCBCSSTTCSEECGGGCCHHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHHSCTTTCCCCSSE
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCE
T ss_conf 98546788865103674455558887502801037899999998613477457999999999999971147879998425
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~dg~~~~~~~~~~~~yDA~Rvpl~ia~d~~w~g~~~~~~~~~~~~~~f~~~~~~~~~~~y~~dG~~~~~~~~~~~g~~a 320 (376)
T d1wu4a1 241 YYDGTPNDEKGYGHFFSDSYRVAANIGLDAEWFGGSEWSAEEINKIQAFFADKEPEDYRRYKIDGEPFEEKSLHPVGLIA 320 (376)
T ss_dssp ETTSSBCCTTSCSSBSGGGHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTCCGGGCEEECTTSCEEEEECSCHHHHHH
T ss_pred EECCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCHHHHH
T ss_conf 35895378778997750199999999977512575356799999999998634666688553368414677888679999
Q ss_pred -------------------------------------------------------E
Q ss_conf -------------------------------------------------------8
Q 002647 518 -------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~a~~~~a~~~~~~a~~~~~~~~~~~~~~~~~~YY~~~L~Llall~lsG~~r~~~p 376 (376)
T d1wu4a1 321 TNAMGSLASVDGPYAKANVDLFWNTPVRTGNRRYYDNCLYLFAMLALSGNFKIWFP 376 (376)
T ss_dssp HHHHGGGGCTTCTTHHHHHHHHHTSCCCCSTTHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECC
T ss_conf 99999997279716899999987234788888878999999999998298444179
|
| >d1bhea_ b.80.1.3 (A:) Polygalacturonase {Erwinia carotovora, subsp. carotovora [TaxId: 554]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Single-stranded right-handed beta-helix superfamily: Pectin lyase-like family: Galacturonase domain: Polygalacturonase species: Erwinia carotovora, subsp. carotovora [TaxId: 554]
Probab=100.00 E-value=0 Score=28333.65 Aligned_cols=1 Identities=0% Similarity=-0.426 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~T~aIq~AIdac~~Gg~V~iP~G~~~vyltg~i~LkSnv~L~l~~ga~L~~s~d~~ 80 (376)
T d1bhea_ 1 SDSRTVSEPKTPSSCTTLKADSSTATSTIQKALNNCDQGKAVRLSAGSTSVFLSGPLSLPSGVSLLIDKGVTLRAVNNAK 80 (376)
T ss_dssp CCSSCCCCCCCCCEEEEEECCSSBCHHHHHHHHTTCCTTCEEEEECSSSSEEEESCEECCTTCEEEECTTCEEEECSCSG
T ss_pred CCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEECEEECCCCEEEEECCEEEEECCCHH
T ss_conf 98654578989975686789997369999999987779999999699745699804897888789991997999738979
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~y~~~~~~~~~~~~~~~~~~~~i~~~~~~Ni~ItG~G~IDG~G~~~~~~~~~~~~~~~~~~~~~~~~~~rP~~i~~~~~~ 160 (376)
T d1bhea_ 81 SFENAPSSCGVVDKNGKGCDAFITAVSTTNSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSK 160 (376)
T ss_dssp GGBSSTTCSSCEESCSCCBCCSEEEESCBSCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECCCCSEEEESCE
T ss_pred HCCCCCCEEEEEECCCCCCCEEEEECCCCEEEEEECCEEECCCCEEECCCCCCHHCCCCCCCCCCCCCCCCEEEEEEECC
T ss_conf 96566630236751576541268824863079972768813344162277641000123444466777897699999115
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 nv~i~~iti~ns~~~~~~~~~~~~v~i~n~~I~~~~~~~NtDGidi~~s~nv~I~n~~i~~gDD~i~~ks~~~~~~~~ni 240 (376)
T d1bhea_ 161 NFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIKAYKGRAETRNI 240 (376)
T ss_dssp EEEEEEEEEECCSSCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECSSCSEEEEECTTSCCEEEE
T ss_pred CEEEEEEEEECCCCEEEEEECCCEEEEEEEECCCCCCCCCCCEEECCCCCEEEEEECEEECCCCCEEEECCCCCCCCCEE
T ss_conf 68997039955993699996885599996750588657776340025645099982533048981566046677774459
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~i~n~~~~~~~g~~iGs~~~~v~nv~i~n~~~~~~~~g~~Iks~~~~gG~v~nI~f~ni~~~~v~~pi~i~~~y~~~~~~ 320 (376)
T d1bhea_ 241 SILHNDFGTGHGMSIGSETMGVYNVTVDDLKMNGTTNGLRIKSDKSAAGVVNGVRYSNVVMKNVAKPIVIDTVYEKKEGS 320 (376)
T ss_dssp EEEEEEECSSSCEEEEEEESSEEEEEEEEEEEESCSEEEEEECCTTTCCEEEEEEEEEEEEESCSEEEEEETTSSCCCCC
T ss_pred EEEEEEEECCCCCEECCCCCCEEEEEEEEEEECCCCCEEEEEECCCCCCEEEEEEEEEEEEECCCCCEEEEEECCCCCCC
T ss_conf 99963896688730645668778899993258688704789825887607989999968993667448998144788888
Q ss_pred -------------------------------------------------------E
Q ss_conf -------------------------------------------------------8
Q 002647 518 -------------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~i~nIt~~Ni~~~~~~~~~l~g~~~~~~~~v~~~nv~i~~~~~~~~~nv~~k~ 376 (376)
T d1bhea_ 321 NVPDWSDITFKDVTSETKGVVVLNGENAKKPIEVTMKNVKLTSDSTWQIKNVNVKK 376 (376)
T ss_dssp CCCEEEEEEEEEEEECSCCEEEEECTTCSSCEEEEEEEEECCTTCEEEEESEEEEC
T ss_pred CCCEEEEEEEEEEEEECCEEEEEECCCCCCCEEEEEEEEEEECCCCCEEEEEEECC
T ss_conf 79779518999079935325999868888823699984899759888788055329
|
| >d2fug41 e.18.1.2 (4:35-409) NADH-quinone oxidoreductase chain 4, Nqo4 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: HydB/Nqo4-like superfamily: HydB/Nqo4-like family: Nqo4-like domain: NADH-quinone oxidoreductase chain 4, Nqo4 species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=28266.05 Aligned_cols=1 Identities=0% Similarity=-0.625 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 p~~hG~~r~~~~v~ge~V~~a~~~ig~~~RGfEk~l~Gr~~~da~~i~~RICGIC~~aH~~A~~~AlE~a~gv~~p~~a~ 80 (375)
T d2fug41 1 PSTHGVLRLMVTLSGEEVLEVVPHIGYLHTGFEKTMEHRTYLQNITYTPRMDYLHSFAHDLAYALAVEKLLGAVVPPRAE 80 (375)
T ss_dssp CEEECSSSCEEEECCSSSCCEEEECCTTCCCHHHHGGGSCHHHHHHHGGGTTSSSHHHHHHHHHHHHHHHTTCCCCHHHH
T ss_pred CCCCCEEEEEEEECCCEEEEEEEEECCCCHHHHHHHCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 99885289999976988999898306652689998749996882212063111038799999999999991998899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~lR~l~~~~e~i~sH~l~~~~l~~~~~~~~~~~~~~~~r~~~~~~~~~~~G~~~h~~~~~~gG~~~~~~~~~~~~~~~~~ 160 (375)
T d2fug41 81 TIRVILNELSRLASHLVFLGTGLLDLGALTPFFYAFRERETILDLFEWVTGQRFHHNYIRIGGVKEDLPEEFVPELKKLL 160 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTSSSSSCCCEETTEESSCCCTTHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCEECCCEEECCCHHHHHHHHHHH
T ss_conf 99999999988767999999834520024388899999899999999846865520521202302279867889999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 240 (375)
T d2fug41 161 EVLPHRIDEYEALFAESPIFYERARGVGVIPPEVAIDLGLTGGSLRASGVNYDVRKAYPYSGYETYTFDVPLGERGDVFD 240 (375)
T ss_dssp TTTTTTTHHHHHHHSSCSCCTTSCSCCCCSSSCSTTTTTTCCSSCCSSCCTTTTTCCSSCCCC-----CCCCCCSSSSHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 76088778898740367500002577533451023315765554555642133120067554556565534424776432
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~g~vEApRG~L~ 320 (375)
T d2fug41 241 RMLVRIREMRESVKIIKQALERLEPGPVRDPNPQITPPPRHLLETSMEAVIYHFKHYTEGFHPPKGEVYVPTESARGELG 320 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCCCSCCBCCCTTTSCCCTTCTTTCTTHHHHHHHHHHSCCCCCSCCCCCCBCCSSSCBC
T ss_pred CCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCEEEE
T ss_conf 10213444421468999899748898744344110335699997554541013444566776899579999974886799
Q ss_pred ------------------------------------------------------E
Q ss_conf ------------------------------------------------------8
Q 002647 518 ------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------a 518 (897)
=
T Consensus 321 H~~~~d~~g~i~~~~ii~PT~~N~~~~e~al~G~~i~D~~~iirSfDpC~sC~dr 375 (375)
T d2fug41 321 YYIVSDGGSMPYRVKVRAPSFVNLQSLPYACKGEQVPDMVAIIASLDPVMGDVDR 375 (375)
T ss_dssp EEEECCSSSSCSEEEECCSHHHHTTTHHHHTTTSCGGGTTHHHHTTCCCHHHHHC
T ss_pred EEEEECCCCCEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCC
T ss_conf 9999989981899999898877999999996799167899998567976447898
|
| >d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aspartate aminotransferase, AAT species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=28263.99 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~r~~~~~~~~~~~~~~~a~~~~~~G~~vI~l~~G~p~~~~p~~i~~~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~ 80 (375)
T d1o4sa_ 1 VSRRISEIPISKTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGE 80 (375)
T ss_dssp CCHHHHHSCCCSSHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHH
T ss_pred CCHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 94546548977899999999999977998589989588997889999999999855876889986789999999864332
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (375)
T d1o4sa_ 81 RYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVG 160 (375)
T ss_dssp HHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCT
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
T ss_conf 15655433323346728999999999981899989982586543102321122222233344332356136777775235
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~l~nP~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~G~ 240 (375)
T d1o4sa_ 161 KTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGW 240 (375)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGG
T ss_pred CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHCCCCCC
T ss_conf 76379981899885577999999999986887098124674003001333332112355778978999405142058866
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~g~~~~~p~gg~f~~~~~ 320 (375)
T d1o4sa_ 241 RVGYLISSEKVATAVSKIQSHTTSCINTVAQYAALKALEVDNSYMVQTFKERKNFVVERLKKMGVKFVEPEGAFYLFFKV 320 (375)
T ss_dssp CCEEEECCHHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSBSSEEEEEC
T ss_pred CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEEC
T ss_conf 44543233331012232212344333320002334321121023678889999999987874495685689407999979
Q ss_pred ------------------------------------------------------E
Q ss_conf ------------------------------------------------------8
Q 002647 518 ------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------a 518 (897)
.
T Consensus 321 ~~~~~~~~~~ll~~~gV~v~pG~~F~~~g~iRis~~~~~e~l~~al~rl~~~l~~ 375 (375)
T d1o4sa_ 321 RGDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFATSIERLTEALDRIEDFLNS 375 (375)
T ss_dssp SSCHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCHHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCC
T ss_conf 9997999999998599999976115899969999728999999999999999659
|
| >d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TRM1-like domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=100.00 E-value=0 Score=28263.88 Aligned_cols=1 Identities=0% Similarity=-1.058 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~i~EG~~~i~vp~~~~~~~~~vFYNp~q~~NRDlsvl~~~~~~~~~vLD~~sasG~rsiRya~E~~~~~V~~nDis~~ 80 (375)
T d2dula1 1 LIEVQEGKAKILIPKAESIYDSPVFYNPRMALNRDIVVVLLNILNPKIVLDALSATGIRGIRFALETPAEEVWLNDISED 80 (375)
T ss_dssp CEEEEETTEEEEEC--------CCCCCGGGHHHHHHHHHHHHHHCCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHH
T ss_pred CEEEEECCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCEEEEECCCHH
T ss_conf 94899586899941787778788242877764107999999973998799868774099999998589978998259989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~~Da~~~~~~~~~~fDvIDiDPfGs~~pfldsAi~a~~~~Gll~v 160 (375)
T d2dula1 81 AYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAERHRYFHFIDLDPFGSPMEFLDTALRSAKRRGILGV 160 (375)
T ss_dssp HHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHHSTTCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEE
T ss_conf 99999999986375432211243323554336741004556567515767744578888817999999997044877999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 TaTD~a~L~G~~~~~~~r~Yg~~~~~~~~~~E~glRill~~i~r~Aa~~~~~i~PllS~~~~~y~Rv~vrv~~~~~~~~~ 240 (375)
T d2dula1 161 TATDGAPLCGAHPRACLRKYLAVPLRGELCHEVGTRILVGVIARYAAKYDLGIDVILAYYKDHYFRAFVKLKDGARKGDE 240 (375)
T ss_dssp EECCHHHHTTSSHHHHHHHHSSBCCCSTTHHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEETTEEEEEEEEEESHHHHHH
T ss_pred EECCCHHHCCCCCHHHHHHHCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEECCHHHHHH
T ss_conf 93686120479917899972876137866501889999999999987429805999999824607999999137677887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~g~~~~C~~c~~~~~~~~~~~~~~~~~GPlW~G~L~d~efl~~~~~~~~~~~~~~~~~~~~ll~~i~eE~~~P~~y 320 (375)
T d2dula1 241 TLEKLGYIYFDDKTGKFELEQGFLPTRPNAYGPVWLGPLKDEKIVSKMVKEAESLSLARKKQALKLLKMIDQELDIPLFY 320 (375)
T ss_dssp HHTTEEEEEECTTTCCEEEEESSSCCSSSCEEEEECSCSBCHHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHSCCSSCCE
T ss_pred HHHHCCCEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 88744817871898877775588999787867883673369999999998754057540569999999998614998298
Q ss_pred ------------------------------------------------------E
Q ss_conf ------------------------------------------------------8
Q 002647 518 ------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------a 518 (897)
-
T Consensus 321 ~l~~la~~lk~~~P~~~~~~~aL~~~Gy~asrtH~~p~~iKTdAp~~~i~~i~r~ 375 (375)
T d2dula1 321 DTHAIGRRLKIETKKVEEIISALREQGYEATRTHFSPTGIKTSAPYEVFIETIKR 375 (375)
T ss_dssp EHHHHHHHHTCCBCCHHHHHHHHHHTTCCEEEETTEEEEEEESSCHHHHHHHHBC
T ss_pred CHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCEECCCCHHHHHHHHHC
T ss_conf 5799998739999999999999997898899657899977137999999999709
|
| >d1kbla3 d.142.1.5 (A:2-376) Pyruvate phosphate dikinase, N-terminal domain {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: Pyruvate phosphate dikinase, N-terminal domain domain: Pyruvate phosphate dikinase, N-terminal domain species: Clostridium symbiosum [TaxId: 1512]
Probab=100.00 E-value=0 Score=28266.88 Aligned_cols=1 Identities=0% Similarity=-1.656 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~k~v~~f~e~~~~d~~lvGGK~AnLgel~~~G~pVP~GFviTt~Ay~~Fl~~n~~~~~~l~~~i~~~l~~l~~~~~~~~~ 80 (375)
T d1kbla3 1 AKWVYKFEEGNASMRNLLGGKGCNLAEMTILGMPIPQGFTVTTEACTEYYNSGKQITQEIQDQIFEAITWLEELNGKKFG 80 (375)
T ss_dssp CCCEEEGGGCCGGGHHHHHHHHHHHHHHHHTTCCCCCEEEECHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHTSCBT
T ss_pred CCEEEECCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 97789887799023643828899899999783998998885099999999826657487999999999866643275446
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 160 (375)
T d1kbla3 81 DTEDPLLVSVRSGARASMPGMMDTILNLGLNDVAVEGFAKKTGNPRFAYDSYRRFIQMYSDVVMEVPKSHFEKIIDAMKE 160 (375)
T ss_dssp CSSSCBCEEEEEECSSCCTTSSCEEEEETCCTTHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 54320121010013432100014676630350456667651343233211310255542000011015678888876653
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~q~~~~~~a~gv~~t~~~~~~~~~~~~i~~~~glg~~vv~ 240 (375)
T d1kbla3 161 EKGVHFDTDLTADDLKELAEKFKAVYKEAMNGEEFPQEPKDQLMGAVKAVFRSWDNPRAIVYRRMNDIPGDWGTAVNVQT 240 (375)
T ss_dssp HTCCCSGGGCCHHHHHHHHHHHHHHHHTTTTTCCCCCCHHHHHHHHHHHHHHHTTSHHHHHHHHHTTCCGGGCCEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCEEECCCCCCCCCEEEC
T ss_conf 04337777767888999999999999875148865553024445530146773146655554420341466666630102
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~eLa~~a~~iE~~yG~PqD 320 (375)
T d1kbla3 241 MVFGNKGETSGTGVAFTRNPSTGEKGIYGEYLINAQGEDVVAGVRTPQPITQLENDMPDCYKQFMDLAMKLEKHFRDMQD 320 (375)
T ss_dssp CCCTTSSTTCEEEEEEEECTTTCCEEEEEEEEESCCHHHHHHTSSCCEEGGGHHHHCHHHHHHHHHHHHHHHHHHTSCEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEECCCCCCCCHHCCCHHHHHHHHHHHHHHHHHCCCCE
T ss_conf 21057774226641245675444321122000013466642431226654431321808999999999999998199614
Q ss_pred ------------------------------------------------------E
Q ss_conf ------------------------------------------------------8
Q 002647 518 ------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------a 518 (897)
-
T Consensus 321 IEWAi~dG~l~ILQaRPv~~~~~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 375 (375)
T d1kbla3 321 MEFTIEEGKLYFLQTRNGKRTAPAALQIACDLVDEGMITEEEAVVRIEAKSLDQL 375 (375)
T ss_dssp EEEEEETTEEEEEEEEECCCCHHHHHHHHHHHHHTTSSCHHHHHHHSCGGGGGGG
T ss_pred EEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHCCC
T ss_conf 6999999989999766788657869999999998699799999872794211229
|
| >d1ih7a1 c.55.3.5 (A:1-375) Exonuclease domain of family B DNA polymerases {Bacteriophage RB69 [TaxId: 12353]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Ribonuclease H-like family: DnaQ-like 3'-5' exonuclease domain: Exonuclease domain of family B DNA polymerases species: Bacteriophage RB69 [TaxId: 12353]
Probab=100.00 E-value=0 Score=28263.93 Aligned_cols=1 Identities=0% Similarity=-0.825 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 m~~fyt~v~~~gn~i~~rg~d~nG~r~~~~~~f~Py~Yv~~~~~~~t~~ksl~G~~v~~v~f~s~~e~r~~~k~~~~~~~ 80 (375)
T d1ih7a1 1 MKEFYLTVEQIGDSIFERYIDSNGRERTREVEYKPSLFAHCPESQATKYFDIYGKPCTRKLFANMRDASQWIKRMEDIGL 80 (375)
T ss_dssp CCCEEEEEEEETTEEEEEEECTTSCEEEEEECCCCEEEEECCTTSCCSCEETTSCBEEEEECSSHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCEEEECCEEEEEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCC
T ss_conf 98644022799999999999679989999954730699988999864534148817666746988999999997155543
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~v~~~~~~~~~~i~d~~~~~~~~~~~~~~~~~~DIE~~~~~~~p~~~~~~~~i~~I~~~~~~~~~~~~~~~~~~~~~~~~ 160 (375)
T d1ih7a1 81 EALGMDDFKLAYLSDTYNYEIKYDHTKIRVANFDIEVTSPDGFPEPSQAKHPIDAITHYDSIDDRFYVFDLLNSPYGNVE 160 (375)
T ss_dssp CCBSCCCHHHHHHHHHTCSCCCCCGGGSCEEEEEEEECCSSSCCCTTTCCSCEEEEEEEETTTTEEEEEEECCCTTCCCC
T ss_pred EECCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCC
T ss_conf 11256641201012357654566754220455788970576656864232100011246615880999996377756654
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~sE~eLL~~F~~~~~~~dPDiitGwN~~~FD~pYL~~R~~~~~~~~~~~ 240 (375)
T d1ih7a1 161 EWSIEIAAKLQEQGGDEVPSEIIDKIIYMPFDNEKELLMEYLNFWQQKTPVILTGWNVESFDIPYVYNRIKNIFGESTAK 240 (375)
T ss_dssp CCCHHHHHSCTTTTCCCCCHHHHTTEEEEEESSHHHHHHHHHHHHHHSCCSEEEETTTTTTHHHHHHHHHHHHHCHHHHG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCHHHHH
T ss_conf 32212233311124555655567985999829999999999999876498899871777887099999998640100233
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~D~~~~~~~~~~~~~~s~~l~~v~~~~l~~~K~~~~~~~~~~~~~d~~~~ 320 (375)
T d1ih7a1 241 RLSPHRKTRVKVIENMYGSREIITLFGISVLDYIDLYKKFSFTNQPSYSLDYISEFELNVGKLKYDGPISKLRESNHQRY 320 (375)
T ss_dssp GGSTTSCEEEEEEECSSCEEEEEEETTCEEEEHHHHHHHHSSCCCSCCSHHHHHHHHTCCCCCCCSSCGGGHHHHHHHHH
T ss_pred HHHHCCCCCEEEEEEECCCCCEECCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCHHHH
T ss_conf 44423785079998512554011035640002899998753023210005678888751466557555999987494686
Q ss_pred ------------------------------------------------------E
Q ss_conf ------------------------------------------------------8
Q 002647 518 ------------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------------a 518 (897)
-
T Consensus 321 ~~Y~~~D~~L~~~L~~kl~~i~~~~~~a~~~~v~~~~v~~q~~~~~~li~~~~~~ 375 (375)
T d1ih7a1 321 ISYNIIDVYRVLQIDAKRQFINLSLDMGYYAKIQIQSVFSPIKTWDAIIFNSLKE 375 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSCGGGGGCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 6520998999999999872899999999987959899738999999999999529
|
| >d1txka2 b.30.5.9 (A:23-396) Glucans biosynthesis protein G (MdoG, OpgG), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Supersandwich superfamily: Galactose mutarotase-like family: MdoG-like domain: Glucans biosynthesis protein G (MdoG, OpgG), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=28198.97 Aligned_cols=1 Identities=0% Similarity=-0.892 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 F~f~~l~~~Ar~lA~~py~~p~~~lP~~l~~L~Yd~yr~Irf~~~~alW~~~~~~f~v~~fh~G~~f~~pV~i~~V~~g~ 80 (374)
T d1txka2 1 FSIDDVAKQAQSLAGKGYETPKSNLPSVFRDMKYADYQQIQFNHDKAYWNNLKTPFKLEFYHQGMYFDTPVKINEVTATA 80 (374)
T ss_dssp CCHHHHHHHHHHHHTSCCCCCCCCCCCC----CHHHHTTCEECGGGCBTTTSSCSCEEEEEECBTTBCSCBEEEEECSSC
T ss_pred CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCE
T ss_conf 98799999999985189889876689878729998971636486521105799998787627876679877999970995
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~i~fd~~~F~y~~~~~~~~~~~~~GfAGFRl~~pln~~~~~de~~~FlGASYFRavg~g~~YGlSARGLAIdTa~~~g 160 (374)
T d1txka2 81 VKRIKYSPDYFTFGDVQHDKDTVKDLGFAGFKVLYPINSKDKNDEIVSMLGASYFRVIGAGQVYGLSARGLAIDTALPSG 160 (374)
T ss_dssp EEECCCCGGGEECTTSCCCTTTSTTCCEEEEEEEECSSCTTCCEEEEEEESTTEEEECCTTCCCCCEEESCEESTTCTTC
T ss_pred EEEEECCHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCHHHEEEECCCCCCCCCHHHEECCCCCCCC
T ss_conf 68810188996678877784556678730599963467887443167771620224534897366311010005799987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 EEFP~F~~FWle~P~~~~~~~~vyALLDspSvtGAYrF~i~PG~~t~~dV~a~Lf~R~~v~~lGiAPLTSMf~~ge~~~~ 240 (374)
T d1txka2 161 EEFPRFKEFWIERPKPTDKRLTIYALLDSPRATGAYKFVVMPGRDTVVDVQSKIYLRDKVGKLGVAPLTSMFLFGPNQPS 240 (374)
T ss_dssp CBCCEEEEEEEECCCTTCCCEEEEEEEEETTEEEEEEEEEECSSSEEEEEEEEEEESSCCSCEEEEEEEECEEEBTTBCC
T ss_pred CCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCEEEEEEEEEEECCCCCCCCCCCHHHHHCCCCCCCC
T ss_conf 67987748996657899976999999239741007999997599889999889980676121350211365306898899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~dD~RPeVHDSDGL~i~~g~GE~iWRPL~NP~~l~~S~f~d~~p~GFGLlQRdR~F~~YqD~ea~Ye~RPSlWVeP~gd 320 (374)
T d1txka2 241 PANNYRPELHDSNGLSIHAGNGEWIWRPLNNPKHLAVSSFSMENPQGFGLLQRGRDFSRFEDLDDRYDLRPSAWVTPKGE 320 (374)
T ss_dssp SSCCSCSCEESCCEEEEECTTSCEEEEECCCCSSCEEEEEEEESCCEEEEECCCCCGGGTCCTTTCGGGCCEEEEEESSC
T ss_pred CCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCEEEEEECCCCCCCCCEECCCCHHHHCCCHHHHCCCCEEEEEECCC
T ss_conf 88987875525664379737996782368898862175675589863233613777232306413233487378876676
Q ss_pred -----------------------------------------------------E
Q ss_conf -----------------------------------------------------8
Q 002647 518 -----------------------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------------------a 518 (897)
+
T Consensus 321 WG~G~V~LvEIPT~~E~~DNIVAfW~P~~~~~~G~~~~f~Yrl~W~~~~p~~h~ 374 (374)
T d1txka2 321 WGKGSVELVEIPTNDETNDNIVAYWTPDQLPEPGKEMNFKYTITFSRDEDKLHA 374 (374)
T ss_dssp CCEEEEEEEECCCSCTTSCCEEEEEEESCCCCTTCEEEEEEEEEEESCGGGGSC
T ss_pred CCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCC
T ss_conf 778679999768997243658999767887899996989989974789876679
|
| >d1ioma_ a.103.1.1 (A:) Citrate synthase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Citrate synthase superfamily: Citrate synthase family: Citrate synthase domain: Citrate synthase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=28189.90 Aligned_cols=1 Identities=0% Similarity=-0.991 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 v~rGL~Gv~v~eS~Is~IDg~~G~L~YRG~~i~dLa~~~sfEEVa~LL~~G~LP~~~el~~f~~~l~~~~~lp~~~~~~l 80 (374)
T d1ioma_ 1 VARGLEGVLFTESRMCYIDGQQGKLYYYGIPIQELAEKSSFEETTFLLLHGRLPRRQELEEFSAALARRRALPAHLLESF 80 (374)
T ss_dssp CCGGGTTCCCSCCSSEEEETTTTEEEETTEEHHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHHTCSCCHHHHHHH
T ss_pred CCCCCCCCEEEEEECEEEECCCCEEEECCEEHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 99888998485655636748988899988559998703999999999978969799999999999997047988898999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~p~~~~pm~~l~~~vs~l~~~~~~~~~~~~~~~~~~~~~lia~~~~i~a~~~~~~~g~~~~~p~~~~s~a~n~l~m~~ 160 (374)
T d1ioma_ 81 KRYPVSAHPMSFLRTAVSEFGMLDPTEGDISREALYEKGLDLIAKFATIVAANKRLKEGKEPIPPREDLSHAANFLYMAN 160 (374)
T ss_dssp TTSCTTSCHHHHHHHHHHHHHHTCTTTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTSCHHHHHHHHHH
T ss_pred HHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 85343421157777766652125752223310689999998624305788899998469877788603679999877623
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 g~~p~~~~~~~l~~~lvl~aDHg~n~St~aaR~~aSt~~d~~~av~agl~al~GplhGga~~~~~~~l~e~~~~~~~~~~ 240 (374)
T d1ioma_ 161 GVEPSPEQARLMDAALILHAEHGFNASTFTAIAAFSTETDLYSAITAAVASLKGPRHGGANEAVMRMIQEIGTPERAREW 240 (374)
T ss_dssp SSCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHCSHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHEEEECCCCCCCCHHHEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHH
T ss_conf 89999899999875613452588765122422554058747788888887337866786528999999850675354999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 v~~~l~~~~~i~GfGH~vy~~~DPRa~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~l~pNvd~~~~~l~~~l 320 (374)
T d1ioma_ 241 VREKLAKKERIMGMGHRVYKAFDPRAGVLEKLARLVAEKHGHSKEYQILKIVEEEAGKVLNPRGIYPNVDFYSGVVYSDL 320 (374)
T ss_dssp HHHHHHTTCCCTTBSCSSCSSCCTTHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHTTTTCCBCHHHHHHHHHHHT
T ss_pred HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
T ss_conf 99998678877776764333553237999999998776427722789999998432430266898878689999999984
Q ss_pred -----------------------------------------------------E
Q ss_conf -----------------------------------------------------8
Q 002647 518 -----------------------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------------------a 518 (897)
=
T Consensus 321 Gip~~~~~~lf~i~R~~Gw~AH~~E~~~~~~~l~RP~~~Y~G~~~r~~~p~~~R 374 (374)
T d1ioma_ 321 GFSLEFFTPIFAVARISGWVGHILEYQELDNRLLRPGAKYVGELDVPYVPLEAR 374 (374)
T ss_dssp TCCGGGHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSCSSCCCCCGGGC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 988565559999999999999999998557985277540069999988676669
|
| >d1gwja_ c.1.4.1 (A:) Morphinone reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: FMN-linked oxidoreductases family: FMN-linked oxidoreductases domain: Morphinone reductase species: Pseudomonas putida [TaxId: 303]
Probab=100.00 E-value=0 Score=28188.24 Aligned_cols=1 Identities=100% Similarity=2.131 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~P~LF~Pl~Ig~~~lkNRiv~apm~~~~~~dg~~t~~~~~yy~~rA~gGlii~e~~~V~~~~~~~~~~~~i~~d~~ 80 (374)
T d1gwja_ 1 TSFSNPGLFTPLQLGSLSLPNRVIMAPLTRSRTPDSVPGRLQQIYYGQRASAGLIISEATNISPTARGYVYTPGIWTDAQ 80 (374)
T ss_dssp CCCCCCCTTSCEEETTEEESCSEEECCCCCCCCSSSCCCHHHHHHHHHTTTSSEEEEEEEESSGGGCCBTTCCBCSSHHH
T ss_pred CCCCCCCCCCCEEECCEEECCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCHHHH
T ss_conf 99994999998418998978875874458988999998799999999984878799974798886578889873555554
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 i~~~k~l~~~vh~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~ps~~~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~ 160 (374)
T d1gwja_ 81 EAGWKGVVEAVHAKGGRIALQLWHVGRVSHELVQPDGQQPVAPSALKAEGAECFVEFEDGTAGLHPTSTPRALETDGIPG 160 (374)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECCTTSCCTTTSGGGCCCEESSSCCCTTCEEEEECTTSCEEEEECCCCEECCGGGHHH
T ss_pred HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 15666689998605862676554168655545588887100035556667655443565544567878860049999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ii~~f~~AA~rA~~AGfDgVEIH~ahGYLl~qFLSp~~N~RtDeYGGSlENR~Rf~~EIi~aIR~~vg~~~v~~r~~~~~ 240 (374)
T d1gwja_ 161 IVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFL 240 (374)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECTTC
T ss_pred HHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEC
T ss_conf 99999999999998099888732220346778887535764454343121100567889998998838753225553100
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~g~~~~~~~~~~~~~~~~ld~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G~i~~~~ae~~l~~g~aD 320 (374)
T d1gwja_ 241 ELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRFKGGLIYCGNYDAGRAQARLDDNTAD 320 (374)
T ss_dssp CCTTCCCSCHHHHHHHHHHHHHHHTCSEEEEECSCBTTBCCCCCTTHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCS
T ss_pred CCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCC
T ss_conf 23687653247888876413110472277751576457886524999999998738878997895999999999869974
Q ss_pred -----------------------------------------------------E
Q ss_conf -----------------------------------------------------8
Q 002647 518 -----------------------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------------------a 518 (897)
|
T Consensus 321 lV~~gR~~iadPd~~~K~~~G~~l~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~ 374 (374)
T d1gwja_ 321 AVAFGRPFIANPDLPERFRLGAALNEPDPSTFYGGAEVGYTDYPFLDNGHDRLG 374 (374)
T ss_dssp EEEESHHHHHCTTHHHHHHHTCCCCCCCGGGSSSSSSTTTTCCCCCCCSSCCCC
T ss_pred EEHHHHHHHHCCCHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHCC
T ss_conf 844669998792299999759988888841125799988387888542235319
|
| >d2a0ua1 c.124.1.5 (A:10-383) Initiation factor 2b {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NagB/RpiA/CoA transferase-like superfamily: NagB/RpiA/CoA transferase-like family: IF2B-like domain: Initiation factor 2b species: Leishmania major [TaxId: 5664]
Probab=100.00 E-value=0 Score=28188.13 Aligned_cols=1 Identities=0% Similarity=-0.393 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~l~si~~~~~~v~ilDQ~~LP~~~~~~~~~t~~~v~~AIk~M~VRGAPaIgvaaA~glala~~~~~~~~~~~s 80 (374)
T d2a0ua1 1 MSKPHHATLESIKYTPGSLRLLDQRKLPLETVFDDVLTVEDIWSAIKEMRVRGAPAIAVSAALGIAVATQRKAANGELKS 80 (374)
T ss_dssp CCCCSSCCCCSEEEETTEEEEECTTTTTTCCCEEEECSHHHHHHHHHTTSSCSHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred CCCCCCCCEEEEEEECCEEEEEECCCCCCCEEEEEECCHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCHH
T ss_conf 99887895016999699999985788998179999699999998856370259429999999999999985222753001
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~el~~~L~~a~~~L~~sRPTAVNL~nAv~rv~~~i~~~~~~~s~~e~~~~ll~~A~~i~~eD~~~n~~Ig~~Ga~li~e 160 (374)
T d2a0ua1 81 GREVQTFLLTSCDFVMTSRPTAVNLFNCLRDLKAQVDKLDPTKAAAEVAQAFVELAEAVYTNDVAFNEGIMRHGAAHILA 160 (374)
T ss_dssp HHHHHHHHHHHHHHHTTSCCSCSHHHHHHHHHHHHHHHSCTTSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 79999999999999985597542256899999999864287778999999999999999999999999999978999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~ilThcn~g~Lat~~~gtal~~i~~a~~~gk~~~V~v~EtRP~~qG~rlta~~L~~~gi~~t~i~Dsa~~ 240 (374)
T d2a0ua1 161 AAKAEGRDKVSILTICNTGALATSRYGTALGVVRQLFYDGKLERVYACETRPWNQGARLTVYECVQEDIPCTLICDGAAS 240 (374)
T ss_dssp HHHHTTCSSEEEEECSCCSTTTSSSSCSHHHHHHHHHHTTCEEEEEEECCTTTTHHHHTHHHHHHHTTCCEEEECGGGHH
T ss_pred HHHHCCCCCCEEEEECCCCCEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEECCCHH
T ss_conf 88621788732676416753375113224677678997698617998046433464689999998616771899545256
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~m~~~~v~~VivGad~v~~nG~v~nkiGT~~~A~~A~~~~vP~~v~a~~~k~~~~~~~~~~i~ie~r~~~ev~~~~~~~ 320 (374)
T d2a0ua1 241 SLMLNRKIDAVVVGADRICQNGDTANKIGTYNLAVSAKFHGVKLYVAAPTTTLDVKTASGNHVEIEEREPTEITTNLVTK 320 (374)
T ss_dssp HHHHHSCCCEEEECCSEECTTCCEEEETTHHHHHHHHHHTTCCEEEECCGGGBCTTCCSGGGSCCCBCCTHHHHBCTTTC
T ss_pred HHHHCCCEEEEEECCEEEEECCCEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC
T ss_conf 66205642589852318984697886246499999999749988999115642767799775646678967734334566
Q ss_pred -----------------------------------------------------E
Q ss_conf -----------------------------------------------------8
Q 002647 518 -----------------------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------------------a 518 (897)
.
T Consensus 321 ~~~~~~~~~~~v~np~fD~tP~~lIt~~iiTe~G~~~P~~~~~~~~~~~~~~~~ 374 (374)
T d2a0ua1 321 QRVVADGPHLSIWNPVFDITPSELITGGIITEKGVQAPAASAPYYDIASIIAQA 374 (374)
T ss_dssp CBCSCCCTTEEECCBSEEEECGGGCCSEEECSSCEECCCSSSSCCCHHHHHHCC
T ss_pred CEECCCCCCCCEECCCCCCCCHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHCC
T ss_conf 120257888602486831789699499788889861655467721479896239
|
| >d1o69a_ c.67.1.4 (A:) Aminotransferase homolog WlaK (PglE, Cj1121c) {Campylobacter jejuni [TaxId: 197]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Aminotransferase homolog WlaK (PglE, Cj1121c) species: Campylobacter jejuni [TaxId: 197]
Probab=100.00 E-value=0 Score=28187.27 Aligned_cols=1 Identities=0% Similarity=-0.692 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~e~~~~~~~l~~~~~~~~G~~~~~fE~~~~~~~~~~~~~~~~SgT~Al~lal~~l~~~~gdeVi~p~~t~~a~~~~~~~ 80 (374)
T d1o69a_ 1 GNELKYIEEVFKSNYIAPLGEFVNRFEQSVKDYSKSENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAPICY 80 (374)
T ss_dssp CCHHHHHHHHHHHTTTSCTTHHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGGTHHHHH
T ss_pred CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHH
T ss_conf 93899999999639807899899999999999978295999678799999999986988839999499661743799843
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~g~~pv~~Di~~~~~~~~~~~~~~~~~~~~~~~aii~~~~~G~~~d~~~i~~~~~~~~i~vIED~a~a~g~~~~~~~~G~ 160 (374)
T d1o69a_ 81 LKAKPVFIDCDETYNIDVDLLKLAIKECEKKPKALILTHLYGNAAKMDEIVEICKENDIVLIEDAAEALGSFYKNKALGT 160 (374)
T ss_dssp TTCEEEEECBCTTSSBCHHHHHHHHHHCSSCCCEEEEECGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTS
T ss_pred CCCEEEECCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCEECCEECCC
T ss_conf 44505734665321012123342100001233201111133310336888987651694410222342145678840688
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~gd~~~fSf~~~K~l~tgeGG~i~tnn~~~~~~~~~~~~~g~~~~~~~~~~~~G~N~rm~ei~Aaig~~qL~~l~~~i~~ 240 (374)
T d1o69a_ 161 FGEFGVYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQMEVLEQRVLK 240 (374)
T ss_dssp SSSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHHTTHHHHHHH
T ss_pred CCCEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCH
T ss_conf 77557894257646534665222133689998530222233333333333458864244624566667777665431004
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 r~~i~~~y~~~L~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~gI~~r~~ 320 (374)
T d1o69a_ 241 KREIYEWYKEFLGEYFSFLDELENSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDLKNKQIETRPL 320 (374)
T ss_dssp HHHHHHHHHHHHTTTEECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHHHTTCCCBCC
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf 67899998864024323333456787773140233034433224310000000010001210999999999879987873
Q ss_pred -----------------------------------------------------E
Q ss_conf -----------------------------------------------------8
Q 002647 518 -----------------------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------------------a 518 (897)
-
T Consensus 321 y~pl~~~~~~~~~~~~~~pna~~~~~~~i~LP~~~~lt~~di~~I~~~I~~~lk 374 (374)
T d1o69a_ 321 WKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSIK 374 (374)
T ss_dssp CCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred CCCHHHCHHHHCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 854342966534787899899999839898969887799999999999999979
|
| >d1nd7a_ d.148.1.1 (A:) WW domain-containing protein 1, WWP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Hect, E3 ligase catalytic domain superfamily: Hect, E3 ligase catalytic domain family: Hect, E3 ligase catalytic domain domain: WW domain-containing protein 1, WWP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28186.77 Aligned_cols=1 Identities=0% Similarity=-0.061 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~f~~~~~~~~~~~~~~i~V~R~~l~~d~~~~l~~~~~~~l~~~l~V~F~gE~g~D~GG~~rEff~~l~~el 80 (374)
T d1nd7a_ 1 HMGFRWKLAHFRYLCQSNALPSHVKINVSRQTLFEDSFQQIMALKPYDLRRRLYVIFRGEEGLDYGGLAREWFFLLSHEV 80 (374)
T ss_dssp CCTHHHHHHHHHHHHHHTCCSSEEEEEECTTTHHHHHHHHHHTSCGGGGGSEEEEEETTTCCCCCTHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 96378999999988761689885599976565899999999716989847876999789874478711999999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~p~~~lf~~~~~~~~~~~~~p~~~~~~~~~~~f~~lG~lig~al~~~~~~~~~f~~~f~k~Llg~~~t~~DL~~iD~~~ 160 (374)
T d1nd7a_ 81 LNPMYCLFEYAGKNNYCLQINPASTINPDHLSYFCFIGRFIAMALFHGKFIDTGFSLPFYKRMLSKKLTIKDLESIDTEF 160 (374)
T ss_dssp TCGGGSSEEESSSSSCCEEECGGGGGSTTHHHHHHHHHHHHHHHHHTTCCCCCCCCHHHHHHHTTCCCCHHHHHTTCHHH
T ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHCHHH
T ss_conf 08866875664798855355874436805899998857999999984961387756899988549989899998857898
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~sl~~l~~~~~e~~~l~l~f~~~~~~~~~~~~~eL~~~G~~~~VT~~N~~~yv~~~~~~~l~~~~~~~~~afr~Gf~~v 240 (374)
T d1nd7a_ 161 YNSLIWIRDNNIEECGLEMYFSVDMEILGKVTSHDLKLGGSNILVTEENKDEYIGLMTEWRFSRGVQEQTKAFLDGFNEV 240 (374)
T ss_dssp HHHHHHHHSSCSCSSCCCCBSEECCCSSTTCCCEESSTTGGGCBCCTTTHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 87499998546410466035787751278742254478997652068789999999999997211789999999869876
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ip~~~l~~f~~~eL~~licG~~~id~~~l~~~~~y~gy~~~s~~i~~fw~vl~~~t~ee~~~fL~FvTGs~rlP~~G~~~ 320 (374)
T d1nd7a_ 241 VPLQWLQYFDEKELEVMLCGMQEVDLADWQRNTVYRHYTRNSKQIIWFWQFVKETDNEVRMRLLQFVTGTCRLPLGGFAE 320 (374)
T ss_dssp SCGGGGTTCCHHHHHHHHHCCCCCCHHHHHHTEEEESCCTTSHHHHHHHHHHHHSCHHHHHHHHHHHHSCSCCCTTCGGG
T ss_pred CCHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHEEECCCCCCCCCCHHH
T ss_conf 79898764889999986279987788999643261367899889999999877069999987446636899889864565
Q ss_pred -----------------------------------------------------E
Q ss_conf -----------------------------------------------------8
Q 002647 518 -----------------------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------------------a 518 (897)
-
T Consensus 321 l~~~~~~~~~~i~~~~~~~~LP~A~TCfn~L~LP~Yss~e~l~ekL~~AI~~~e 374 (374)
T d1nd7a_ 321 LMGSNGPQKFCIEKVGKDTWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETE 374 (374)
T ss_dssp CEETTEECCEEEECCSCTTSCCEEEGGGTEEECCCCSSHHHHHHHHHHHHHSCC
T ss_pred HCCCCCCCCEEECCCCCCCCCCCHHHHHCEEECCCCCCHHHHHHHHHHHHHHCC
T ss_conf 435678875131468999999705440267669898899999999999997149
|
| >d1rp4a_ a.227.1.1 (A:) Endoplasmic oxidoreductin 1, Ero1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: ERO1-like superfamily: ERO1-like family: ERO1-like domain: Endoplasmic oxidoreductin 1, Ero1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=28184.84 Aligned_cols=1 Identities=0% Similarity=-0.659 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~s~~~vd~~N~~i~p~L~~L~~~dyFRyfkVnL~~~CPFW~~d~~~C~~~~C~V~~c~dee~iP~~~~~~~~~~~~~~~~ 80 (374)
T d1rp4a_ 1 GSFNELNAINENIRDDLSALLKSDFFKYFRLDLYKQCSFWDANDGLCLNRACSVDVVEDWDTLPEYWQPEILGSFNNDTM 80 (374)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTSTTTSEEEEESSCCCSSSCSSSSCCCTTTTBCCCSSCGGGSCGGGSHHHHTCCCTTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 97878999899988999986378960434338899898999432574998998803775565861024101046664112
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dfC~~dD~~~~~~~YVdLl~NPERyTGY~G~~a~~IW~~IY~ENCF~~~~ 160 (374)
T d1rp4a_ 81 KEADDSDDECKFLDQLCQTSKKPVDIEDTINYCDVNDFNGKNAVLIDLTANPERFTGYGGKQAGQIWSTIYQDNCFTIGE 160 (374)
T ss_dssp EECCTTCGGGSBHHHHSSTTTSSCCSSSCCCHHHHTTCCCTTEEEEETTTSCCCCCCBCHHHHHHHHHHHHHTCCCCTTS
T ss_pred HHCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
T ss_conf 21145653002204033320355554431101334456777754766300856235888873788999999975789876
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~c~ekrvfyrlISGlHsSIs~Hl~~~yl~~~~~~w~pN~~~f~~R~g~~p~rl~NLYF~y~~~LrAl~k~~~~l~~~~ 240 (374)
T d1rp4a_ 161 TGESLAKDAFYRLVSGFHASIGTHLSKEYLNTKTGKWEPNLDLFMARIGNFPDRVTNMYFNYAVVAKALWKIQPYLPEFS 240 (374)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHSEEETTTTEEECCHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHGGGCCCCS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 43107788999988888888999998764167767637899999999736838889899999999999998888886467
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~l~~~~~~~~fde~~~f~~~~~~~lk~efr~~frnisriMDCV~CeKCrLwGKlQt~GlgtALKIL 320 (374)
T d1rp4a_ 241 FCDLVNKEIKNKMDNVISQLDTKIFNEDLVFANDLSLTLKDEFRSRFKNVTKIMDCVQCDRCRLWGKIQTTGYATALKIL 320 (374)
T ss_dssp TTSSTTTTHHHHHHHHHHTTCCGGGGSCTTCTTTSCHHHHHHHHHHHHHHHHGGGGCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 77877789999999999871666678888538841399999999999999999716676376756899887799999998
Q ss_pred -----------------------------------------------------E
Q ss_conf -----------------------------------------------------8
Q 002647 518 -----------------------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------------------a 518 (897)
-
T Consensus 321 f~~~~~~~~~~~~~~~~L~R~ElvALiNt~~rlS~SI~~v~~F~~m~~~~~~~~ 374 (374)
T d1rp4a_ 321 FEINDADEFTKQHIVGKLTKYELIALLQTFGRLSESIESVNMFEKMYGKRLLER 374 (374)
T ss_dssp HHHHTCCHHHHHHHHHTSBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 535553346766664554599999999999999999999999999999764129
|
| >d1so7a_ b.68.1.1 (A:) Sialidase 2 (Neu2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Sialidase 2 (Neu2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28180.39 Aligned_cols=1 Identities=0% Similarity=-2.055 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~p~~~~~~~f~~g~~~yRiP~lv~~~~g~~l~A~a~~r~~~~d~~~~~iv~~rS~D~G~T~~~~Ws~~~~v~~~~~~~~~ 80 (374)
T d1so7a_ 1 LPVLQKESVFQSGAHAYRIPALLYLPGQQSLLAFAEQRASKKDEHAELIVLRRGDYDAPTHQVQWQAQEVVAQARLDGHR 80 (374)
T ss_dssp CCCSEEEEEEECTTCCEEEEEEEEETTTTEEEEEEEECC-------CEEEEEEEEEEGGGTEEEECCCEECTTSCCTTEE
T ss_pred CCCCCEEEEEECCCCCEEECEEEEECCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCE
T ss_conf 99431267768895368647799985999999999687677668987699999637883043466798994778989955
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~p~~~~d~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~TWs~p~~i~~~~~~~~~~~~~~~~~~~~~ 160 (374)
T d1so7a_ 81 SMNPCPLYDAQTGTLFLFFIAIPGQVTEQQQLQTRANVTRLCQVTSTDHGRTWSSPRDLTDAAIGPAYREWSTFAVGPGH 160 (374)
T ss_dssp EEEEEEEECTTTCCEEEEEEEEESSCCHHHHHCTTCCCCEEEEEEESSTTSSCCCCEECHHHHHGGGGGGEEEEEECSSC
T ss_pred EEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCCEEEEEECCC
T ss_conf 56212789899997999998506877653224688885408999688886335686026610145435774366520233
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~~~~~~~~~~e~~~~e~~~~~~~~~~~~~~~~~~~r 240 (374)
T d1so7a_ 161 CLQLNDRARSLVVPAYAYRKLHPIQRPIPSAFCFLSHDHGRTWARGHFVAQDTLECQVAEVETGEQRVVTLNARSHLRAR 240 (374)
T ss_dssp CEECCSTTCCEEEEEEEEECCSSSSCCEEEEEEEEESSTTSSCEECCCCSBSEEEEEEEEEEC--CEEEEEEEEESSSEE
T ss_pred CEEEEECCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCE
T ss_conf 12664048868866676516766678971499999358754110156568888422588851456643677425478967
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~S~D~G~tW~~~~~~~~l~~~~~~~~~~s~i~~~~~~~~~~~~~~~ll~~~p~~~~~r~~~~l~l~~S~D~G~tW~~ 320 (374)
T d1so7a_ 241 VQAQSTNDGLDFQESQLVKKLVEPPPQGCQGSVISFPSPRSGPGSPAQWLLYTHPTHSWQRADLGAYLNPRPPAPEAWSE 320 (374)
T ss_dssp EEEEESSTTSSCCCCEEEEEEECCTTTCCCCEEEEEECCCC----CSEEEEEEEECCSSSSEEEEEEEESSTTCGGGCCC
T ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCEECCC
T ss_conf 99996279966543202333448888885314898335434444688369983788988887608999998889916478
Q ss_pred -----------------------------------------------------E
Q ss_conf -----------------------------------------------------8
Q 002647 518 -----------------------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~i~~g~~~YS~~~~~~dg~~~~~~i~~lyE~~~~~~i~f~~~~l~~~~~~~~ 374 (374)
T d1so7a_ 321 PVLLAKGSCAYSDLQSMGTGPDGSPLFGCLYEANDYEEIVFLMFTLKQAFPAEY 374 (374)
T ss_dssp CEEEEEEEEEEEEEEEEEECTTSSEEEEEEEEETTTTEEEEEEEEHHHHCGGGC
T ss_pred CEEECCCCCCCCHHEECCCCCCCCEEEEEEEECCCCCEEEEEEEEHHHHCCCCC
T ss_conf 548688997684525867998885699999956997657999989999175779
|
| >d1kfwa1 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Type II chitinase domain: Psychrophilic chitinase B species: Arthrobacter sp., tad20 [TaxId: 1667]
Probab=100.00 E-value=0 Score=28177.54 Aligned_cols=1 Identities=0% Similarity=-0.825 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~g~rvvgYy~~W~~y~r~~~~~~l~~~i~~~~lTHi~YAFa~i~~~~~~~~~~~~~~~~~~~g~~~~~d~~~d~ 80 (374)
T d1kfwa1 1 PLTSTVNGYRNVGYFAQWGVYGRAFQAKQLDVSGTAKNLTHINYSFGNINNQTLTCFMANKAQGTGPNGSDGAGDAWADF 80 (374)
T ss_dssp CCBSSBTTBEEEEEEEGGGGSTTCCCHHHHHHTSCGGGCSEEEEEEECBCTTTCSBCCCEECCCSSTTTTTTCEEHHHHH
T ss_pred CCCCCCCCCEEEEEECCCEECCCCCCHHHCCCCCCHHHCCEEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 98888888789999895400588898634767798524987999123014875532024311134778752347606541
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lK~~~p~lKvllSiGGw~~s~~F~~~a~~~~~R~~Fi~s~v~~~~~~~l~ 160 (374)
T d1kfwa1 81 GMGYAADKSVSGKADTWDQPLAGSFNQLKQLKAKNPKLKVMISLGGWTWSKNFSKAAATEASRQKLVSSCIDLYIKGNLP 160 (374)
T ss_dssp TCCCCTTTSSSSSCCCTTCSCCHHHHHHHHHHTTCTTCEEEEEEECSSSCTTHHHHTSSHHHHHHHHHHHHHHHTSCCEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 33334444456655653321013689999998618997599998189877763111047889999999999999981975
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~FDGiDiDWEyP~~~~~~~~~~~~~~~D~~nf~~Ll~eLR~~ld~~~~~~~k~~~Ls~A~~~~~~~~ 240 (374)
T d1kfwa1 161 NFEGRGGAGAAAGIFDGIDIDWEWPGTNSGLAGNGVDTVNDRANFKALLAEFRKQLDAYGSTNNKKYVLSAFLPANPADI 240 (374)
T ss_dssp EETTEEETTTTTTTCCEEEEECSCTTSSCSSTTCCCCTTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECSSHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCC
T ss_conf 21111232233244663011226514446777777887648999999999999999987563575389999852540011
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~d~~~i~~~vD~invMtYD~~G~w~~~~tg~~apLy~~~~~~~~~~~~~svd~aV~~~~~~Gvp~~KlvlGipyd~ 320 (374)
T d1kfwa1 241 DAGGWDDPANFKSLDFGSIQGYDLHGAWNPTLTGHQANLYDDPADPRAPSKKFSADKAVKKYLAAGIDPKQLGLGLAADN 320 (374)
T ss_dssp HHHTTTCGGGGGTCSEEEECCSCSSCTTSTTBCCCSSCSSCCTTCCSCGGGCCCHHHHHHHHHHTTCCGGGEEEEEESCC
T ss_pred CCCCCCHHHHHCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCHHHEEEEECCCC
T ss_conf 23473266452004799997144046789987776675779977877777770699999999987999899389846799
Q ss_pred -----------------------------------------------------E
Q ss_conf -----------------------------------------------------8
Q 002647 518 -----------------------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------------------a 518 (897)
-
T Consensus 321 ~~si~~K~~y~~~~glgG~m~W~~~~D~~g~Ll~a~~~~l~~~~~~~~~~~~p~ 374 (374)
T d1kfwa1 321 IATTKQKTDYIVSKGLGGGMWWELSGDRNGELVGAMSDKFRAAAPGPVTEAAPP 374 (374)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECGGGCTTCHHHHHHHHHHHHSSCCSCCCBCCC
T ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 999999999998569953999975579997499999998458899987788998
|
| >d2bvca2 d.128.1.1 (A:105-478) Glutamine synthetase, C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Glutamine synthetase/guanido kinase superfamily: Glutamine synthetase/guanido kinase family: Glutamine synthetase catalytic domain domain: Glutamine synthetase, C-terminal domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=0 Score=28185.90 Aligned_cols=1 Identities=0% Similarity=-1.157 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~DPR~iLkk~~~~l~~~G~~~~~~~g~E~EF~Lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (374)
T d2bvca2 1 SRDPRNIARKAENYLISTGIADTAYFGAEAEFYIFDSVSFDSRANGSFYEVDAISGWWNTGAATEADGSPNRGYKVRHKG 80 (374)
T ss_dssp TTCHHHHHHHHHHHHHHHSSCSEEEEEEEECEEEESEEEEEECSSCEEEEEECTTBGGGTTCSBCTTSCBCCCCCBCTTC
T ss_pred CCCHHHHHHHHHHHHHHCCCCCEEEEEECEEEEEECCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98869999999999997799870357726589997145445566776201363000246787656788887786656566
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~i~~~l~~~Gi~~~~~~~E~~~~gQ~Ei~~~~~~~l~aAD~~~~~k~~ik~vA~~~G~~atFmp 160 (374)
T d2bvca2 81 GYFPVAPNDQYVDLRDKMLTNLINSGFILEKGHHEVGSGGQAEINYQFNSLLHAADDMQLYKYIIKNTAWQNGKTVTFMP 160 (374)
T ss_dssp CSCBCTTTSCCHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHHHHHHHHHHHHHHHHHHHHHTTCEEECCS
T ss_pred CEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 50002000226899999998787469763763215666825887067630668999999999999999986397477764
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 KP~~~~~Gsg~H~h~Sl~~~~~n~~~~~~~~~~lS~~~~~~iaGlL~h~~~l~al~~P~vNSY~Rl~~~~~ap~~~~Wg~ 240 (374)
T d2bvca2 161 KPLFGDNGSGMHCHQSLWKDGAPLMYDETGYAGLSDTARHYIGGLLHHAPSLLAFTNPTVNSYKRLVPGYEAPINLVYSQ 240 (374)
T ss_dssp CSSTTSCCCCEEEEEEEEETTEECSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHSCSTTHHHHSSTTSSSCSBCCEEE
T ss_pred EECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCEEEEECC
T ss_conf 31567887660079974158988655566655567999999999985209888987378742653489875644774046
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~nR~~~iRi~~~~~~~~~~riE~R~~da~aNPYL~lAailaagl~Gi~~~l~p~~p~~~~~~~~~~~~~~~~~~LP~sl~ 320 (374)
T d2bvca2 241 RNRSACVRIPITGSNPKAKRLEFRSPDSSGNPYLAFSAMLMAGLDGIKNKIEPQAPVDKDLYELPPEEAASIPQTPTQLS 320 (374)
T ss_dssp TCTTSSEEECCCCSCTTSCCEEECSCCSSSCHHHHHHHHHHHHHHHHHTTCCCCCCCCSCGGGCCHHHHHTSCBCCSSHH
T ss_pred CCCCCCEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHH
T ss_conf 76655311024468975626885278833107899999999866656412344687778513299657658132501799
Q ss_pred -----------------------------------------------------E
Q ss_conf -----------------------------------------------------8
Q 002647 518 -----------------------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------------------a 518 (897)
.
T Consensus 321 eAl~~l~~d~~~~~~~~~~g~~~i~~y~~~Kr~~E~~~~~~~vt~wE~~~Y~~~ 374 (374)
T d2bvca2 321 DVIDRLEADHEYLTEGGVFTNDLIETWISFKRENEIEPVNIRPHPYEFALYYDV 374 (374)
T ss_dssp HHHHHHHHCCHHHHGGGSSCHHHHHHHHHHHHHHTHHHHHTSCCHHHHHHHTTC
T ss_pred HHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCC
T ss_conf 999999759787876563789999999999999999999689999999604899
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=100.00 E-value=0 Score=28112.01 Aligned_cols=1 Identities=0% Similarity=0.105 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~a~~~~~~~~~a~~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~~~~~a~SpDG~~l 80 (373)
T d2madh_ 1 SSASAAAAAAAAALAAGAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLPNPVAAHSGSEF 80 (373)
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEEECCCCCCEEECCCCCEE
T ss_conf 90565434310132145678986563018999789997342257876599998999979999957988607986899989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~va~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~ 160 (373)
T d2madh_ 81 ALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSD 160 (373)
T ss_pred EEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCEE
T ss_conf 99960577532124531899997778938889726885136851689708998589937999986987467762368728
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 240 (373)
T d2madh_ 161 DQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQAD 240 (373)
T ss_pred EEEECCCEEEEEECCCCCEEEEECCCCEEEEEECCCCEEEEEEEEECCCCCCCCEEEEEEECCCCEEEEECCCCEEEEEE
T ss_conf 99824520699962899199999479939999747742667886300366753043458878994299925896599997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~~~~~~ 320 (373)
T d2madh_ 241 ISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDV 320 (373)
T ss_pred CCCCEEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCE
T ss_conf 68990789776305647578664136741335771499759995488824786258986999989999698986689982
Q ss_pred ----------------------------------------------------E
Q ss_conf ----------------------------------------------------8
Q 002647 518 ----------------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------------a 518 (897)
+
T Consensus 321 ~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~~g~~P~~l~~~~~~ 373 (373)
T d2madh_ 321 DAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSGPQVLSVMNEA 373 (373)
T ss_pred EEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCEEEEECCC
T ss_conf 58999989998999996799929999999998999988889898189984689
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=28110.68 Aligned_cols=1 Identities=0% Similarity=-0.858 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~MkkI~~v~GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~i~~d~~l~~~~~~~s~~~~~~~~~~~~ 80 (373)
T d1v4va_ 1 GMKRVVLAFGTRPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALSLFGIQEDRNLDVMQERQALPDLAARILPQA 80 (373)
T ss_dssp CCEEEEEEECSHHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHTTTCCCSEECCCCSSCCCHHHHHHHHHHHH
T ss_pred CCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99769999873697999999999997189998899992688255637122408886656787888887789999999987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~l~~~kPD~vlv~GDr~e~la~a~aa~~~~ipi~HiegG~rsg~~~~~~~de~~R~~iskls~~hf~~t~~~~~~L~~ 160 (373)
T d1v4va_ 81 ARALKEMGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLRSGNLKEPFPEEANRRLTDVLTDLDFAPTPLAKANLLK 160 (373)
T ss_dssp HHHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCCCCSCTTSSTTHHHHHHHHHHHCSEEEESSHHHHHHHHT
T ss_pred HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCHHHHHHHHH
T ss_conf 66664037640011136753103778898762122241343455433567616666655223443255122156666666
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~Ge~~~~I~~vG~p~~D~i~~~~~~~~~~~~~~~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~ 240 (373)
T d1v4va_ 161 EGKREEGILVTGQTGVDAVLLAAKLGRLPEGLPEGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNPVV 240 (373)
T ss_dssp TTCCGGGEEECCCHHHHHHHHHHHHCCCCTTCCSSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCHHH
T ss_pred HCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
T ss_conf 30454213442662155777654311000223445531688426555312789999999986533565035640342221
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~n~~~~~~l~~~~~l~ll~~s~~vignSssgi~Ea~~lg~P~Inir~~~eRqeg~~~g~nvlv~~d~~~ 320 (373)
T d1v4va_ 241 REAVFPVLKGVRNFVLLDPLEYGSMAALMRASLLLVTDSGGLQEEGAALGVPVVVLRNVTERPEGLKAGILKLAGTDPEG 320 (373)
T ss_dssp HHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEEEEESCHHHHHHHHHTTCCEEECSSSCSCHHHHHHTSEEECCSCHHH
T ss_pred HHHHHHHHCCCCCCEEECCCHHHHHHHHHHHCEEEECCCCHHHHCCHHHCCCEEEECCCCCCHHHHHCCEEEECCCCHHH
T ss_conf 03555543033320011100078888876430168506412222003205868984887669878962904975899999
Q ss_pred ----------------------------------------------------E
Q ss_conf ----------------------------------------------------8
Q 002647 518 ----------------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------------a 518 (897)
-
T Consensus 321 I~~~i~~~l~~~~~~~~~~~~~npYGdG~as~rI~~~L~~~~~~~~~~~~~~~ 373 (373)
T d1v4va_ 321 VYRVVKGLLENPEELSRMRKAKNPYGDGKAGLMVARGVAWRLGLGPRPEDWLP 373 (373)
T ss_dssp HHHHHHHHHTCHHHHHHHHHSCCSSCCSCHHHHHHHHHHHHTTSSCCCCCCCC
T ss_pred HHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 99999999719898864024889898987999999999998489989878899
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00 E-value=0 Score=28110.25 Aligned_cols=1 Identities=0% Similarity=-0.061 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~KkV~IIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~g~~~d~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (373)
T d1seza1 1 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTESEGDVTFLIDSLGLREKQQFP 80 (373)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCCCSHHHHHHHHHTTCGGGEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEECCCCEEEECCCEEEECCCHHHHHHHHHHCCCCCCCCC
T ss_conf 99899989688999999999868998999958998858668954299899538658727887999999983885212332
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (373)
T d1seza1 81 LSQNKRYIARNGTPVLLPSNPIDLIKSNFLSTGSKLQMLLEPILWKNKKLSQVSDSHESVSGFFQRHFGKEVVDYLIDPF 160 (373)
T ss_dssp SSCCCEEEESSSSEEECCSSHHHHHHSSSSCHHHHHHHHTHHHHC----------CCCBHHHHHHHHHCHHHHHTTHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCHHCCCCHH
T ss_conf 11233212244333221122134442122211355566788887642000000111000000012223432001011012
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~ 240 (373)
T d1seza1 161 VAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSFSFLGGMQTLTDAICKD 240 (373)
T ss_dssp HHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC----------CCCSCCSTTCSCBEETTCTHHHHHHHHTT
T ss_pred HHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH
T ss_conf 21010233110025567899987641001445567876404322222101234333203540453034612799999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 l~~~~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~D~Vi~a~p~~~l~~l~~~~~~~~~~~~~~~~~~~~ 320 (373)
T d1seza1 241 LREDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSMKIAKRGNPFLLNFIPEVYGH 320 (373)
T ss_dssp SCTTTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHHTSEEESSSSBCCCTTSCCCCCT
T ss_pred HCCCEEECCCEEEEEEEECCCCCCCCCCEEEECCCCCCCCEEEECCEEEECCCHHHHHHCCCCCCCCCCCHHHHCCCCCC
T ss_conf 50655764987899999678542113552786124789746998899999986577653365557775332330100245
Q ss_pred ----------------------------------------------------E
Q ss_conf ----------------------------------------------------8
Q 002647 518 ----------------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~~~~~~~t~~pglf~aGd~~~g~~~~~A~~~G~~aA~~i~~~L~~~~ 373 (373)
T d1seza1 321 NYDSVLDAIDKMEKNLPGLFYAGNHRGGLSVGKALSSGCNAADLVISYLESVS 373 (373)
T ss_dssp THHHHHHHHHHHHHHSTTEEECCSSSSCSSHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred CCCCEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 78867626423478999999972578765399999999999999999875289
|
| >d1ogmx2 b.80.1.10 (X:202-574) Dextranase, catalytic domain {Penicillium minioluteum [TaxId: 28574]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Single-stranded right-handed beta-helix superfamily: Pectin lyase-like family: Dextranase, catalytic domain domain: Dextranase, catalytic domain species: Penicillium minioluteum [TaxId: 28574]
Probab=100.00 E-value=0 Score=28108.99 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~ga~p~~~~d~t~a~~~a~~~~~~~~~~~vvy~PpG~y~~g~~~~~~~~~~~~~g~~l~~~~~~~y~~~G~~~~~~i~ 80 (373)
T d1ogmx2 1 LPSGMIPHMTPDNTQTMTPGPINNGDWGAKSILYFPPGVYWMNQDQSGNSGKLGSNHIRLNSNTYWVYLAPGAYVKGAIE 80 (373)
T ss_dssp CCGGGSCCCCTTTEEECCSEEECTTTTCSSSEEEECSEEEEECBCTTCCBSCSSSCCEECCTTCCEEEECTTEEEESCEE
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCEEEECCEEECCCEEEECCCEEECCCCEEEECCCCCEEEEEEE
T ss_conf 98886589898846875310465244689888998994638387430474588738669636743776079857986798
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~nv~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~n~~i~giti~~s~~~~~~~~~~~~v~i~ 160 (373)
T d1ogmx2 81 YFTKQNFYATGHGILSGENYVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVGPTINAPPFNTMDFNGNSGISSQ 160 (373)
T ss_dssp ECCSSCEEEESSCEEECTTSCTTCBTTTTTBSCCCTTTBCCSEEESCCCSSEEEEEESCEEECCSSCCEEECSSSCEEEE
T ss_pred ECCCCEEEEECCEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECEEEECCCEEEEEECCCCEEEEE
T ss_conf 63765089971207838866632566543223346776567755899984227999677997899169987268759999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~i~~~~~~~~n~dgi~~~~~~~i~~~~~~~gDD~i~~~s~~i~v~n~~~~~~~~~~~~~~g~~g~~i~nv~v~ni~v~ 240 (373)
T d1ogmx2 161 ISDYKQVGAFFFQTDGPEIYPNSVVHDVFWHVNDDAIKIYYSGASVSRATIWKCHNDPIIQMGWTSRDISGVTIDTLNVI 240 (373)
T ss_dssp EEEEEEECCCSTTCCCCBCCTTCEEEEEEEEESSCSEECCSTTCEEEEEEEEECSSSCSEECCSSCCCEEEEEEEEEEEE
T ss_pred EEEEEECCCCCCCCEEEECCCCEEEEEEEEECCCCEEEECCCCEEEEEEEEECCCCEEEEEECCCCCCCCEEEEEEEEEE
T ss_conf 78999668877787005324878999528963887799657988999799978875247883667887631599915998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ni~f~nI~~~~~~~~~i~~~~~~~~~~~~i~nV~i~nI~~~~~~~~ 320 (373)
T d1ogmx2 241 HTRYIKSETVVPSAIIGASPFYASGMSPDSRKSISMTVSNVVCEGLCPSLFRITPLQNYKNFVVKNVAFPDGLQTNSIGT 320 (373)
T ss_dssp ECCCSSCCTTTTCEEEEECCCSSSSCCCEEEEEEEEEEEEEEECSSBCEEEEECCSEEEEEEEEEEEEETTCBCCSTTCT
T ss_pred CCEECCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEEEEEECCCC
T ss_conf 85611220033434443322112100689869992899919998753676999876788888332189984499804571
Q ss_pred ----------------------------------------------------E
Q ss_conf ----------------------------------------------------8
Q 002647 518 ----------------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------------a 518 (897)
.
T Consensus 321 ~~~~~~~~~~~~~~~~~~Ni~i~~~~i~~~n~~~~~~~~~~~~g~~~~~~~~~ 373 (373)
T d1ogmx2 321 GESIIPAASGLTMGLAISAWTIGGQKVTMENFQANSLGQFNIDGSYWGEWQIS 373 (373)
T ss_dssp TCEEECCCTTCCEEEEEEEEEETTEECCTTTCSTTSSSCEEECGGGTTTCEEC
T ss_pred EEEEEECCCCCCCCEEEECEEEECEEEECCCCCCCCCCEEEECCCCCCCCCCC
T ss_conf 66875014687388578676991969864777777321678777504531229
|
| >d1qo0a_ c.93.1.1 (A:) Amide receptor/negative regulator of the amidase operon (AmiC) {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Periplasmic binding protein-like I superfamily: Periplasmic binding protein-like I family: L-arabinose binding protein-like domain: Amide receptor/negative regulator of the amidase operon (AmiC) species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=0 Score=28108.15 Aligned_cols=1 Identities=100% Similarity=0.403 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~pvIG~~~p~tG~~a~~G~~~~~g~~lAv~~iN~~GGi~Gr~i~l~~~D~~~~~~~a~~~a~~Li~~~~V~aiiG~~~S~ 80 (373)
T d1qo0a_ 1 RPLIGLLFSETGVTADIERSQRYGALLAVEQLNREGGVGGRPIETLSQDPGGDPDRYRLCAEDFIRNRGVRFLVGCYMSH 80 (373)
T ss_dssp CCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHTTCBTTBCCEEEEECCTTCHHHHHHHHHHHHHHSCCCEEEECCSHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECHHHH
T ss_conf 98899972886842655299999999999998850996886889999769999999999999999608966998041333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~av~~~~~~~~vp~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~~~~~vaii~~d~~~g~~~~~~~~~~~~~ 160 (373)
T d1qo0a_ 81 TRKAVMPVVERADALLCYPTPYEGFEYSPNIVYGGPAPNQNSAPLAAYLIRHYGERVVFIGSDYIYPRESNHVMRHLYRQ 160 (373)
T ss_dssp HHHHHHHHHHHHTCEEEECSCCCCCCCCTTEEECSCCGGGTHHHHHHHHHHHSCSEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHC
T ss_conf 24456899997199678223354345687336604671787777888987515742553467764037888653111220
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~G~~vv~~~~~~~~~~~~d~~~~~~~i~~~~pd~v~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (373)
T d1qo0a_ 161 HGGTVLEEIYIPLYPSDDDLQRAVERIYQARADVVFSTVVGTGTAELYRAIARRYGDGRRPPIASLTTSEAEVAKMESDV 240 (373)
T ss_dssp TTCEEEEEEEECSSCCHHHHHHHHHHHHHHTCSEEEEECCSTTHHHHHHHHHHHHCSSCCCCEEESSCCHHHHTTSCHHH
T ss_pred CCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 36733678971676442046799999875188732320235047779999998457656640125545248776444443
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~g~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~aY~a~~~~a~Ai~~ag~~d~~~i~~aL~~~~~~~~~G~ 320 (373)
T d1qo0a_ 241 AEGQVVVAPYFSSIDTPASRAFVQACHGFFPENATITAWAEAAYWQTLLLGRAAQAAGNWRVEDVQRHLYDIDIDAPQGP 320 (373)
T ss_dssp HTTCEEEESCCTTCCSHHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHSSCCEEETTEE
T ss_pred HCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEECCCEE
T ss_conf 05720102442000027789999999987398788770799999999999999998689999999999855953078365
Q ss_pred ----------------------------------------------------E
Q ss_conf ----------------------------------------------------8
Q 002647 518 ----------------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------------a 518 (897)
-
T Consensus 321 i~f~~~~~~~~~~~~i~q~~~dg~~~vv~~~~~~v~p~p~~~~~~~~~w~~~~ 373 (373)
T d1qo0a_ 321 VRVERQNNHSRLSSRIAEIDARGVFQVRWQSPEPIRPDPYVVVHNLDDWSASM 373 (373)
T ss_dssp EEECTTTSBEEBCCEEEEECTTSCEEEEEECSSCBCCCTTCCSCCGGGGGGGC
T ss_pred EEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99838998346866999993699589996069836799974888865455569
|
| >d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Plasmepsin (a hemoglobin-degrading enzyme) species: Plasmodium vivax [TaxId: 5855]
Probab=100.00 E-value=0 Score=28107.29 Aligned_cols=1 Identities=0% Similarity=0.338 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~~Y~~~I~iGtP~Q~~~v~~D 80 (373)
T d1miqa_ 1 HLTLAFKIERPYDKVLKTISKKNLKNYIKETFNFFKSGYMKQNYLGSENDVIELDDVANIMFYGEGEVGDNHQKFMLIFD 80 (373)
T ss_dssp CEEEEEEEECHHHHHHHHSCHHHHHHHHHHHHHHHTTSCTTCCCCCBTTBCCCGGGTBCEEEECCCEETTTTEECCEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCEEEEEEEE
T ss_conf 92233303582467787766666889887644331134232122256787687255169789999998799989999997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 TGSs~lWv~~~~C~~~~c~~~~~y~~~~SsT~~~~~~~~~~~y~~G~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~~~~~ 160 (373)
T d1miqa_ 81 TGSANLWVPSKKCNSSGCSIKNLYDSSKSKSYEKDGTKVDITYGSGTVKGFFSKDLVTLGHLSMPYKFIEVTDTDDLEPI 160 (373)
T ss_dssp TTCCCEEEEBTTCCSSGGGGSCCBCGGGCTTCEEEEEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEECGGGTTH
T ss_pred CCCHHEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCEEEEEEEEEEEEECCCCEEEEEEEEEECCCCCCC
T ss_conf 99625189879999743468982389889853388963899928817999999788897674267668999840356753
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~g~l~~Gg~d~~~~~g~~~~~pv~~~~~w~ 240 (373)
T d1miqa_ 161 YSSVEFDGILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNHDLYWQ 240 (373)
T ss_dssp HHHSCCCEEEECSSCCTTCSSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBSSSSSSE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCCEEEEEECCCCCCCCEEECCCCCCHHCCCEEEEEECCCCCEEE
T ss_conf 23566563566444433578854301124443225653278871367888715642677830114424687114552489
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 i~l~~~~~~~~~~~~~~iiDTGTs~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~P~itf~f~g~~~~l~p~~y~ 320 (373)
T d1miqa_ 241 IDLDVHFGKQTMEKANVIVDSGTTTITAPSEFLNKFFANLNVIKVPFLPFYVTTCDNKEMPTLEFKSANNTYTLEPEYYM 320 (373)
T ss_dssp EEEEEEETTEEEEEEEEEECTTBSSEEECHHHHHHHHHHHTCEECTTSSCEEEETTCTTCCCEEEECSSCEEEECGGGSE
T ss_pred EEEEEEECCEECCCCCEEECCCCCEECCCHHHHHHHHHHHCCEECCCCCEEEECCCCCCCCEEEEEECCEEEEECHHHEE
T ss_conf 99998778675487416862677213157899999999839755068970675344688863999999999998889906
Q ss_pred ----------------------------------------------------E
Q ss_conf ----------------------------------------------------8
Q 002647 518 ----------------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------------a 518 (897)
=
T Consensus 321 ~~~~~~~~~~C~~~~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~rIGfA~ak~ 373 (373)
T d1miqa_ 321 NPILEVDDTLCMITMLPVDIDSNTFILGDPFMRKYFTVFDYDKESVGFAIAKN 373 (373)
T ss_dssp EESSSSSCSEEEESEEECCSSSSEEEECHHHHHHEEEEEETTTTEEEEEEECC
T ss_pred EEEEECCCCEEEEEEEECCCCCCCEEECHHHHCCEEEEEECCCCEEEEEECCC
T ss_conf 88996799899999998888999899717943769999999999999998079
|
| >d1m0wa2 d.142.1.6 (A:6-210,A:324-491) Eukaryotic glutathione synthetase ATP-binding domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: Eukaryotic glutathione synthetase ATP-binding domain domain: Eukaryotic glutathione synthetase ATP-binding domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=28105.62 Aligned_cols=1 Identities=0% Similarity=-1.623 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~s~~~~~~l~~~~~dwa~~hGl~~~~~~~~~~~~~~~~aP~tL~Pspfpr~~F~~a~~vq~~~n~L~~~vS~D~~~~~~f 80 (373)
T d1m0wa2 1 PSKDQLNELIQEVNQWAITNGLSMYPPKFEENPSNASVSPVTIYPTPIPRKCFDEAVQIQPVFNELYARITQDMAQPDSY 80 (373)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCEECCTTGGGCTTEEEECCEESSCEEECHHHHHHHHHHHHHHHHHHHHHHHHHTCTTSH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_conf 98799999999999999971947436877789886145787952776888999999999999999999997240426899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 L~~~l~~~~~~D~~Ft~~L~~i~~~v~~~g~~~~q~i~Lgl~RSDYMld~~~~~~~~KQVE~NTIa~sfg~ls~~v~~lH 160 (373)
T d1m0wa2 81 LHKTTEALALSDSEFTGKLWSLYLATLKSAQYKKQNFRLGIFRSDYLIDKKKGTEQIKQVEFNTVSVSFAGLSEKVDRLH 160 (373)
T ss_dssp HHHHHHHHHHHTTTTHHHHHHHHHHHTSCCSSCCCCCEEEEEEEEEEEEEETTEEEEEEEEEECSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHCCCCCCCCHHHHEEEEEEEHHHHHHHHHHHHHH
T ss_conf 99998767405889999999999999854446243258744301321477666523441230020020121888999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~l~~~~~~d~~~~~~~d~~~~~~~~~~~le~~~a~~~~~~l~g~KKvQq~La~pgvLe~Fl~d~~~~~~lr~tF~~ly~ 240 (373)
T d1m0wa2 161 SYLNRANKYDPKGPIYNDQNMVISDSGYLLSKALAKAVESYKSQQKKIQQLLTDEGVLGKYISDAEKKSSLLKTFVKIYP 240 (373)
T ss_dssp HHHHHTTSSCTTSCSSCGGGBCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHTTSHHHHTTTCCCHHHHHHHHTTCCCEEE
T ss_pred HHHHHCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCCHHHHHHHHHHHCCCCC
T ss_conf 99985557788775016886545155189886666466776467652672103668898867988999999998504786
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 Ld~~~~g~~~~~~Al~~p~~~VLKPQrEGGGnniyg~dI~~~L~~l~~~e~~ayILMerI~Pp~~~~~~~~r~~~~~~~~ 320 (373)
T d1m0wa2 241 LDDTKLGREGKRLALSEPSKYVLKPQREGGGNNVYKENIPNFLKGIEERHWDAYILMELIEPELNENNIILRDNKSYNEP 320 (373)
T ss_dssp CSSSHHHHHHHHHHHHCGGGEEEEESSCSSCCCEEGGGHHHHHHTSCGGGGGGEEEEECCCCCCBCSCCEEETTEEECCC
T ss_pred CCCCHHHHHHHHHHHCCCHHEEECCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEECCCEEEECC
T ss_conf 78502128999998619153897455557665401479999987478444113307854179988875997299011277
Q ss_pred ----------------------------------------------------E
Q ss_conf ----------------------------------------------------8
Q 002647 518 ----------------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------------a 518 (897)
-
T Consensus 321 ~vSELGifG~~l~~~~~v~~N~~~G~LlRTK~~~~nEGGVaaG~g~lDS~~L~ 373 (373)
T d1m0wa2 321 IISELGIYGCVLFNDEQVLSNEFSGSLLRSKFNTSNEGGVAAGFGCLDSIILY 373 (373)
T ss_dssp BEEEEEEEEEEEECSSCEEEEEEEEEEEEEECCEEETTEEEECCEEECCEEEC
T ss_pred EEECCCCCEEEEECCCEEEEECCEEEEEECCCCCCCCCCEECCEEECCCHHCC
T ss_conf 32033041899978977997165028896279988876810354223422009
|
| >d1r5ya_ c.1.20.1 (A:) Queosine tRNA-guanine transglycosylase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: tRNA-guanine transglycosylase family: tRNA-guanine transglycosylase domain: Queosine tRNA-guanine transglycosylase species: Zymomonas mobilis [TaxId: 542]
Probab=100.00 E-value=0 Score=28037.18 Aligned_cols=1 Identities=100% Similarity=-0.162 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
|
T Consensus 1 ~~~~~Fei~~~d~~AR~G~L~~~~g~i~TP~fmpv~t~g~v~~ltpd~l~~~g~~~il~Ntyhl~~~pg~~~i~~~gglh 80 (372)
T d1r5ya_ 1 RPRFSFSIAAREGKARTGTIEMKRGVIRTPAFMPVGTAATVKALKPETVRATGADIILGNTYHLMLRPGAERIAKLGGLH 80 (372)
T ss_dssp CCSCEEEEEEEETTEEEEEEEETTEEEEESEEECBCTTSSCTTCCHHHHHHTTCSCEEEEHHHHHHTTCHHHHHHTTCHH
T ss_pred CCCEEEEEEECCCCEEEEEEEECCEEEECCEEEECCCCCCCCCCCHHHHHHCCCCEEECHHHHHHHCCCCHHHHHCCCHH
T ss_conf 99607999965585004899979977679978754778808847999999728988833188887587617877426513
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~f~~~~~~iltdsGg~q~~sl~~~~~~~~~gv~f~s~~~g~~~~ltpe~~i~~q~~ig~DI~~~Ldd~~~~~~~~~~~~~ 160 (372)
T d1r5ya_ 81 SFMGWDRPILTDSGGYQVMSLSSLTKQSEEGVTFKSHLDGSRHMLSPERSIEIQHLLGSDIVMAFDECTPYPATPSRAAS 160 (372)
T ss_dssp HHHTCCSCEEEECSHHHHC-CC-CCEEETTEEEC---------CBCHHHHHHHHHHHTCSEEECCCCCCCSSCCHHHHHH
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHH
T ss_conf 34204565200247654323223455577885353226872111000779999985088467522446653101678899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~rt~~w~~~~~~~~~~~~~~~~~~~lfgivqGg~~~dlR~~s~~~l~~~~~~G~aiGgl~~~~~~~~~~~~v~~~~~~ 240 (372)
T d1r5ya_ 161 SMERSMRWAKRSRDAFDSRKEQAENAALFGIQQGSVFENLRQQSADALAEIGFDGYAVGGLAVGEGQDEMFRVLDFSVPM 240 (372)
T ss_dssp HHHHHHHHHHHHHHHHHTSHHHHHHCEEEEEECCTTCHHHHHHHHHHHHHHCCSEEEECSCSSSSCHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHCCCC
T ss_conf 99999999999999875055667666321131541265688889999986213732122445675067788899850200
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 Lp~~kPr~l~Gvg~P~~il~~V~~GvD~FD~~~p~r~Ar~G~alt~~g~~~l~~~~~~~d~~Pl~~~C~C~~C~~~sraY 320 (372)
T d1r5ya_ 241 LPDDKPHYLMGVGKPDDIVGAVERGIDMFDCVLPTRSGRNGQAFTWDGPINIRNARFSEDLKPLDSECHCAVCQKWSRAY 320 (372)
T ss_dssp SCTTSCEEETTCCSHHHHHHHHTTTCCEEECSHHHHHHHTTEECCTTCCEETTSGGGTTCCSCSSSSCCSHHHHHCCHHH
T ss_pred CCCCCCEEECCCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCEEECCCCEEECCCCCCCCCCCCCCCCCCHHHCCCCHHH
T ss_conf 12011022047898789888360589954543113111136157259832321232335689869898992325159999
Q ss_pred ---------------------------------------------------E
Q ss_conf ---------------------------------------------------8
Q 002647 518 ---------------------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------------------a 518 (897)
-
T Consensus 321 l~HL~~~~E~l~~~Ll~iHNl~~~~~~~~~iR~aI~~g~f~~~~~~f~~~y~ 372 (372)
T d1r5ya_ 321 IHHLIRAGEILGAMLMTEHNIAFYQQLMQKIRDSISEGRFSQFAQDFRARYF 372 (372)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHC
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
T ss_conf 9877638836899999999999999999999999985999999999999649
|
| >d1c3pa_ c.42.1.2 (A:) HDAC homologue {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Arginase/deacetylase superfamily: Arginase/deacetylase family: Histone deacetylase, HDAC domain: HDAC homologue species: Aquifex aeolicus [TaxId: 63363]
Probab=100.00 E-value=0 Score=28036.40 Aligned_cols=1 Identities=0% Similarity=1.068 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
|
T Consensus 1 ~k~~li~~~d~~~~~~g~~HPe~p~Rl~~i~~~L~~~gl~~~~~~~~p~~At~e~L~~vHs~~Yi~~l~~~~~~~~~~~~ 80 (372)
T d1c3pa_ 1 KKVKLIGTLDYGKYRYPKNHPLKIPRVSLLLRFKDAMNLIDEKELIKSRPATKEELLLFHTEDYINTLMEAERCQCVPKG 80 (372)
T ss_dssp CCEEEEECGGGGGSCCCTTCGGGSCCHHHHHHHHHHTTCCCGGGEEECCCCCHHHHTTTSCHHHHHHHHHHHHHTSCCTT
T ss_pred CEEEEEECHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCC
T ss_conf 90899968201587897843959799999999999769987880771898999999871899999999974544467522
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~p~~~~~~~~a~~~~g~~~~a~~~~~~g~~a~~ppGG~HHA~~~~a~GFC~fNnvAiaa~~l~~~~~~R 160 (372)
T d1c3pa_ 81 AREKYNIGGYENPVSYAMFTGSSLATGSTVQAIEEFLKGNVAFNPAGGMHHAFKSRANGFCYINNPAVGIEYLRKKGFKR 160 (372)
T ss_dssp HHHHHCCSSSSSCSSTTTTHHHHHHHHHHHHHHHHHHTTCEEEETTCCCTTCBTTBCBTTBSSCHHHHHHHHHHHTTCCC
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCC
T ss_conf 31014688767878889999998753358897653224542241246534421024313640460999999998744674
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 V~ivD~DvHhGnGtq~if~~d~~V~~~SiH~~~~~~~p~~tG~~~e~G~~~g~g~~~NiPL~~g~~D~~y~~~~~~~l~p 240 (372)
T d1c3pa_ 161 ILYIDLDAHHCDGVQEAFYDTDQVFVLSLHQSPEYAFPFEKGFLEEIGEGKGKGYNLNIPLPKGLNDNEFLFALEKSLEI 240 (372)
T ss_dssp EEEEECSSSCCHHHHHHHTTCSSEEEEEEEECTTTSTTSSSCCTTCCCCGGGTTSEEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 47874345677762577761477543000257777788888772236787665412414488655628999999986799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~f~Pd~IvvsaG~D~~~~Dplg~l~lt~~~~~~~~~~~~~~~~~~~~vleGGY~~~~~a~~~~~~~~~l~g~~~~~~ 320 (372)
T d1c3pa_ 241 VKEVFEPEVYLLQLGTDPLLEDYLSKFNLSNVAFLKAFNIVREVFGEGVYLGGGGYHPYALARAWTLIWCELSGREVPEK 320 (372)
T ss_dssp HHHHCCCSEEEEECCSTTBTTCTTCSCCBCHHHHHHHHHHHHHHHCSCEEECCCCCCHHHHHHHHHHHHHHHHTCCCCSS
T ss_pred HHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99866976899978816677686568868888999999999985899699975878588999999999999829999845
Q ss_pred ---------------------------------------------------E
Q ss_conf ---------------------------------------------------8
Q 002647 518 ---------------------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------------------a 518 (897)
+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 372 (372)
T d1c3pa_ 321 LNNKAKELLKSIDFEEFDDEVDRSYMLETLKDPWRGGEVRKEVKDTLEKAKA 372 (372)
T ss_dssp CCHHHHHHHHHSCCCCSSTTCCCGGGGGCSSCCCCCCCCCHHHHHHHHHHHC
T ss_pred CCHHHHHHHCCCCHHHHCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 6877887631588777424467033200247855535778899999998509
|
| >d1j58a_ b.82.1.2 (A:) Oxalate decarboxylase OxdC (YvrK) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: RmlC-like cupins family: Germin/Seed storage 7S protein domain: Oxalate decarboxylase OxdC (YvrK) species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=0 Score=28035.30 Aligned_cols=1 Identities=0% Similarity=-1.389 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~g~~~~gp~~~~~~~~~~d~~~~~~td~g~~~~~~~~f~~~~~~~~~gg~~r~~~~~~lp~~~~~a~~~~~L~ 80 (372)
T d1j58a_ 1 PQPIRGDKGATVKIPRNIERDRQNPDMLVPPETDHGTVSNMKFSFSDTHNRLEKGGYAREVTVRELPISENLASVNMRLK 80 (372)
T ss_dssp CCSEETTEECCCCSCCCHHHHHHCHHHHSCCTTCBSCCCCCEECGGGSCCEEETTEEEEEECTTTCTTCSSCEEEEEEEC
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEHHHCHHHHHHHHEEEEEC
T ss_conf 98604899998889877666531864458997766755105642133544236797147864443800331100589988
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 pga~~~pH~H~~ae~~yVl~G~~~vt~Vd~~G~~~~~~l~~GDv~~~P~G~~H~i~n~~dg~e~l~vf~~~~~~~~~~f~ 160 (372)
T d1j58a_ 81 PGAIRELHWHKEAEWAYMIYGSARVTIVDEKGRSFIDDVGEGDLWYFPSGLPHSIQALEEGAEFLLVFDDGSFSENSTFQ 160 (372)
T ss_dssp TTCEEEEEEESSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEEEEEEEEEEEEESCTTCCGGGEEE
T ss_pred CCCCCCCCCCCCCCEEEEEECEEEEEEEECCCCEEEEEECCCCEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCEE
T ss_conf 99676873637643899995779999994899489988536988998999779997179995899997788866653043
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~p~evLa~af~v~~~~~~~i~~~e~~i~~~~~p~~~~~~~~~~~~g~~~~~~~~~l~~q~P~~~~gG~~~~~d 240 (372)
T d1j58a_ 161 LTDWLAHTPKEVIAANFGVTKEEISNLPGKEKYIFENQLPGSLKDDIVEGPNGEVPYPFTYRLLEQEPIESEGGKVYIAD 240 (372)
T ss_dssp HHHHHHTSCHHHHHHHHTCCTGGGTTSCSSCCSEECCCCCCCHHHHCCCCTTCCCSSCSEEEGGGSCCEECSSEEEEEES
T ss_pred ECCCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEC
T ss_conf 10121359878998761999899863431223312456887423454147788998763230224688415774679926
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~fp~~~~is~~~~~l~PG~~~~~H~Hp~a~E~~yvl~G~g~v~v~~~~g~~~t~~l~~GDv~~iP~g~~H~i~N~g~e 320 (372)
T d1j58a_ 241 STNFKVSKTIASALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFASDGHARTFNYQAGDVGYVPFAMGHYVENIGDE 320 (372)
T ss_dssp TTTSTTCCSCEEEEEEECTTCEEEEEECSSSCEEEEEEESEEEEEEEEETTEEEEEEEESSCEEEECTTCBEEEEECSSS
T ss_pred CCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEECEEEEEEECCCCCEEEEEECCCCEEEECCCCEEEEEECCCC
T ss_conf 33477667506999998899645887799972999999790999998579806899825985899899974999987999
Q ss_pred ---------------------------------------------------E
Q ss_conf ---------------------------------------------------8
Q 002647 518 ---------------------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------------------a 518 (897)
+
T Consensus 321 ~l~~l~vf~s~~~~~i~~~~~l~~~P~~vv~~~~~~~~e~~~~l~~~k~~vv 372 (372)
T d1j58a_ 321 PLVFLEIFKDDHYADVSLNQWLAMLPETFVQAHLDLGKDFTDVLSKEKHPVV 372 (372)
T ss_dssp CEEEEEEESSSSCCCEEHHHHHHTSCHHHHHHHHTCCHHHHTTCCSSCCSBC
T ss_pred CEEEEEEECCCCCCEEEHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCCCCCC
T ss_conf 8899999789996545687876549999999885969999998875687669
|
| >d1noya_ c.55.3.5 (A:) Exonuclease domain of family B DNA polymerases {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Ribonuclease H-like family: DnaQ-like 3'-5' exonuclease domain: Exonuclease domain of family B DNA polymerases species: Bacteriophage T4 [TaxId: 10665]
Probab=100.00 E-value=0 Score=28033.97 Aligned_cols=1 Identities=0% Similarity=-0.360 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~fytnv~~~gn~il~rg~~~~G~r~~~~~~f~Py~y~~~~~~~~~ksl~G~~v~~v~f~s~~~~r~~~~~~~~~~~~~~ 80 (372)
T d1noya_ 1 DEFYISIETVGNNIVERYIDENGKERTREVEYLPTMFRHCKEESKYKDIYGKNCAPQKFPSMKDARDWMKRMEDIGLEAL 80 (372)
T ss_dssp CCEEEEEEEETTEEEEEEECTTSCEEEEEEECCCSEECGGGGTCSSCTTTTCCCCCEECSSHHHHHHHHHHHHHHCTTCT
T ss_pred CCCCEEEEEECCEEEEEEEECCCEEEEEEECCEEEEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCEEE
T ss_conf 98661369999999999996599799999656058999858997858359908877857999999999997256663464
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~die~~~~~~~~~~~~~~~i~~I~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 160 (372)
T d1noya_ 81 GMNDFKLAYISDTYGSEIVYDRKFVRVANCDIEVTGDKFPDPMKAEYEIDAITHYDSIDDRFYVFDLLNSMYGSVSKWDA 160 (372)
T ss_dssp HHHHHHHHHHHHHTCSCCCCCGGGCCEEEEEEEECCSSCCCTTTCCSCEEEEEEEETTTTEEEEEEECCCSSCCCCCCCH
T ss_pred ECCCCCEEEHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHEEECCCCEEEEEEECCCCCCCCCCCCC
T ss_conf 02343413312316545556623225773022002346688631010000222144159879999962656566556555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~E~~lL~~F~~~~~~~dPDii~G~N~~~FD~pYL~~R~~~~~~~~~~~~~~~ 240 (372)
T d1noya_ 161 KLAAKLDCEGGDEVPQEILDRVIYMPFDNERDMLMEYINLWEQKRPAIFTGWNIEGFDVPYIMNRVKMILGERSMKRFSP 240 (372)
T ss_dssp HHHHSCGGGTCCCCCHHHHTTEEEEEESCHHHHHHHHHHHHHHSCCSEEECSSTTTTHHHHHHHHHHHHHHHHHHGGGST
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHH
T ss_conf 55433222346665545668759998099999999999999872888799970678616799999987456310111221
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~sy~L~~v~~~~l~~~K~~~~~~l~~~~~~d~~~l~~Yn 320 (372)
T d1noya_ 241 IGRVKSKLLQNMYGSKEIYSIDGVSILDYLDLYKKFAFTNLPSFSLESVAQHETKKGKLPYDGPINKLRETNHQRYISYN 320 (372)
T ss_dssp TSCEEEEECCGGGCSCEEEEETTSEECCHHHHHHHHTCCCCSCCSHHHHHHHHHSCCCCCCSSCGGGHHHHHHHHHHHHH
T ss_pred CCCCCCEEEECCCCCCEEEEECCCEEEEEEHHHEECCCCCCHHHHHHHHEEECCCCCCCCCCHHHHHHHHHCHHHHHEEC
T ss_conf 26521001101356522564033148975101200002330024344310001146777742249999874925702201
Q ss_pred ---------------------------------------------------E
Q ss_conf ---------------------------------------------------8
Q 002647 518 ---------------------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------------------a 518 (897)
-
T Consensus 321 i~D~~L~~~L~~kl~~i~~~~~la~~~gvp~~~v~~~~~~~~~~~~~~l~~~ 372 (372)
T d1noya_ 321 IIDVESVQAIDKIRGFIDLVLSMSYYAKMPFSGVMSPIKTWDAIIFNSLKGE 372 (372)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHHHTCCGGGGGCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHCC
T ss_conf 9988999999998757999999999989398993749999999999986259
|
| >d1qlpa_ e.1.1.1 (A:) Antitrypsin, alpha-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Serpins superfamily: Serpins family: Serpins domain: Antitrypsin, alpha-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28033.51 Aligned_cols=1 Identities=0% Similarity=-1.424 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~~Fa~~l~~~l~~~~~~~N~v~SP~si~~~La~l~~Ga~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~~~~ 80 (372)
T d1qlpa_ 1 FNKITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATAFAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRT 80 (372)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHCSSSCEEECHHHHHHHHHHHHTTCCHHHHHHHHHHTTCCTTTSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 93220769999999999986129798299878999999999998546799999999709998778689999999999987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~l~~~n~i~~~~~~~l~~~f~~~~~~~f~~~~~~~df~~~~~~~~~iN~wv~~~T~g~i~~~~~~~~~~t~l 160 (372)
T d1qlpa_ 81 LNQPDSQLQLTTGNGLFLSEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDTVF 160 (372)
T ss_dssp HSCSSCCCCEEEEEEEEEETTCCBCHHHHHHHHHTSCCEEEEECTTSHHHHHHHHHHHHHHHTTTSSCSCCCCCCTTCCE
T ss_pred HHCCCCCHHHHHHEEEEECCCCCCCHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
T ss_conf 53247614451010023316776478999999987275241455444699999999999998579875545678974155
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~lina~~f~~~W~~~F~~~~t~~~~F~~~~~~~~~V~mm~~~~~f~~~~~~~l~~~~~~lp~~~~~~~~il~~~~~~l~~ 240 (372)
T d1qlpa_ 161 ALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLGMFNIQHCKKLSSWVLLMKYLGNATAIFFLPDEGKLQH 240 (372)
T ss_dssp EEEEEEEECCCBSSCCCGGGCEEEEEESSSSCEEEEEEEEEEEEEEEEEETTTTEEEEEEEETTTEEEEEEEECTTCHHH
T ss_pred HHHHHHEEECCCCCCCCHHCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCCCCEEEEECCCCCCCEEEEEECCCCCHHH
T ss_conf 54323213043113566210445654036885489750000153111014667869995256777259999778679899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 l~~~L~~~~l~~~~~~~~~~~v~v~lPkF~i~~~~dl~~~L~~lGl~~~F~~~ad~~~i~~~~~l~vs~v~q~~~i~v~E 320 (372)
T d1qlpa_ 241 LENELTHDIITKFLENEDRRSASLHLPKLSITGTYDLKSVLGQLGITKVFSNGADLSGVTEEAPLKLSKAVHKAVLTIDE 320 (372)
T ss_dssp HHHHCCHHHHHHHHHCCCCEEEEEEEECEEEEEEEEHHHHTGGGTCCGGGSTTCCCTTTBSSSCCCCCEEEEEEEEEECS
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEECCHHHHHHHCCCHHHHCCHHHHCCCCCCCCCEEEEEEEEEEEEECC
T ss_conf 98764599999998735644789998789985211577877755946554225453176788981566378899999878
Q ss_pred ---------------------------------------------------E
Q ss_conf ---------------------------------------------------8
Q 002647 518 ---------------------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------------------a 518 (897)
-
T Consensus 321 ~Gteaaa~t~~~~~~~s~~~~f~~drPFlf~I~~~~t~~iLf~G~v~~Pt~~ 372 (372)
T d1qlpa_ 321 KGTEAAGAMFLEAIPMSIPPEVKFNKPFVFLMIEQNTKSPLFMGKVVNPTQK 372 (372)
T ss_dssp CSSSSCCCCCCCCCCSSCCCEEECCSCEEEEEEETTTCCEEEEEEESCTTCC
T ss_pred CCCCHHHHHEEECCCCCCCCEEEECCCEEEEEEECCCCCEEEEEEECCCCCC
T ss_conf 8400323210102357899759926998999999899939999992799899
|
| >d1vkpa_ d.126.1.6 (A:) Agmatine iminohydrolase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Pentein, beta/alpha-propeller superfamily: Pentein family: Porphyromonas-type peptidylarginine deiminase domain: Agmatine iminohydrolase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=0 Score=28032.73 Aligned_cols=1 Identities=100% Similarity=1.201 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~tp~~~gfrmPaEwe~~~~~~l~wP~~~~~w~~~~~~~~~~~~~i~~~Ia~~e~V~vl~~~~~~~~~~~~~~~nV~~~~ 80 (372)
T d1vkpa_ 1 RESPAEHGYYMPAEWDSHAQTWIGWPERQDNWRHNALPAQRVFAGVAKAISKFEPVTVCASPAQWENARKQLPEDIRVVE 80 (372)
T ss_dssp CCCGGGGTCBCCCTTSCEEEEEECCCCCTTTSTGGGHHHHHHHHHHHHHHHTTSCEEEEECTTTHHHHHHHSCTTSEEEE
T ss_pred CCCHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCEEEE
T ss_conf 97935549976898563615999868998621345556899999999997389849999797999999975746728999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~dD~W~RD~GPifv~~~~~~~~~~~~~~~~~vdf~FN~wG~k~~~~~~~~~~d~~~~~~ia~~~~~~~~~~~lvlEGG 160 (372)
T d1vkpa_ 81 MSMNDSWFRDSGPTFIVRKRPVKLSSLNRNIAGIDWNFNAWGGANDGCYNDWSHDLLVSRKILALERIPRFQHSMILEGG 160 (372)
T ss_dssp CCCSSCCHHHHSCEEEECCC-------CCSEEEEEEECCTTTHHHHSSBSCCTTHHHHHHHHHHHHTCCEEEEEEECCGG
T ss_pred CCCCCHHHHCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCC
T ss_conf 15898788614877998088642334678557860201366655555421345677999987412168744567166389
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~ie~dG~GtlltTe~clln~nRNP~~sk~~ie~~Lk~~lGv~~viwl~~g~~~~DdTdGHID~~arFi~~~til~~~~~d 240 (372)
T d1vkpa_ 161 SIHVDGEGTCLVTEECLLNKNRNPHMSKEQIEEELKKYLGVQSFIWLPRGLYGDEDTNGHIDNMCCFARPGVVLLSWTDD 240 (372)
T ss_dssp GEEECSSSEEEEEHHHHTCTTTCTTSCHHHHHHHHHHHHCCCEEEEESCCCTTCTTTTCCGGGTEEEEETTEEEEEECCC
T ss_pred CEEECCCCCEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHEEEECCCCEEEEEECCC
T ss_conf 77989996299756782077889998999999999986297559997670027988765500058971799079873288
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~y~~~~~~~~~L~~~~d~~g~~~~ii~lp~p~~~~~~~~~~~~~~~~~~~~~~~~g~~l~aSY~Nfli~N~~VivP 320 (372)
T d1vkpa_ 241 ETDPQYERSVEALSVLSNSIDARGRKIQVIKLYIPEPLYMTEEESSGITQDGEAIPRLAGTRLAASYVNFYIANGGIIAP 320 (372)
T ss_dssp TTSTHHHHHHHHHHHHHTCBCTTSCBCEEEEEECCSCCBCCHHHHHTSCCCSSBCCCCTTCBCCCCTTCCEEETTEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEC
T ss_conf 76855899999999999887505884317983034540003200145334666554568988655347999999999995
Q ss_pred ---------------------------------------------------E
Q ss_conf ---------------------------------------------------8
Q 002647 518 ---------------------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------------------a 518 (897)
.
T Consensus 321 ~ygd~~~D~~A~~~l~~~fP~r~Vi~Id~~~~i~~~gG~iHCiT~q~Pa~~~ 372 (372)
T d1vkpa_ 321 QFGDPIRDKEAIRVLSDTFPHHSVVGIENAREIVLAGGNIHCITQQQPAEPT 372 (372)
T ss_dssp CCSCHHHHHHHHHHHHHHCTTSEEEEETTTHHHHTTTCCTGGGEEEEECCCC
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCEEECCCCCCCCCC
T ss_conf 7989430799999999988898799827889998579853575777779999
|
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=0 Score=28029.17 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~p~~~a~I~g~g~~~P~~~v~n~e~~~~~~~~~~~~~~~~~~~ri~~~tGI~~R~~~~~~~~~~~~~~~~~~~~ 80 (372)
T d1teda_ 1 AQLPPAPPTTVAVIEGLATGTPRRVVNQSDAADRVAELFLDPGQRERIPRVYQKSRITTRRMAVDPLDAKFDVFRREPAT 80 (372)
T ss_dssp CCCCCCCCCCEEEEEEEEEECCSCEEEHHHHHHHHHTC----CCTTHHHHHHHTSCCSEEECSSCTTSTTHHHHTTCSSC
T ss_pred CCCCCCCCCCEEEEEEEEEECCCEEECHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHCCCC
T ss_conf 99897999844899988996799178399999999860678177899999998359863514516543461445414887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~r~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~a 160 (372)
T d1teda_ 81 IRDRMHLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNA 160 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHH
T ss_conf 88888877737999999999999997599988998899964689888668899876514687625766004674179999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 L~~A~~~l~sg~~~~~LVV~~E~~s~~~~~~d~~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (372)
T d1teda_ 161 LGTATNYVRAHPAMKALVVCIELCSVNAVFADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSSFSQLLDNTE 240 (372)
T ss_dssp HHHHHHHHHHSTTCEEEEEEEEECGGGCCCCSSHHHHHHHHHBCEEEEEEEEEEECTTSCCCTTCEEEEEEEEEECTTCT
T ss_pred HHHHHHHHHCCCCCCCEEEEEHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCC
T ss_conf 99999998559976521653112002104777613565655413632047750477645567750587035642168876
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~i~Hq~~~~i~~~i~~~Lgl~~ek~~~s~~~l 320 (372)
T d1teda_ 241 DGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKIIEQSVRSLGISAELAAQSWDVL 320 (372)
T ss_dssp TSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCCGGGCSCEEECCSCHHHHHHHHHHHTCCGGGGHHHHHHH
T ss_pred CCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 55456778776320014777999998889999987876399878742232247659999999998198978816568888
Q ss_pred ---------------------------------------------------E
Q ss_conf ---------------------------------------------------8
Q 002647 518 ---------------------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~GN~~sasip~~L~~~l~~g~~~~g~d~vll~~fG~G~s~~~~ll~~~~~ 372 (372)
T d1teda_ 321 ARFGNMLSVSLIFVLETMVQQAESAKAISTGVAFAFGPGVTVEGMLFDIIRR 372 (372)
T ss_dssp HHHCBCTHHHHHHHHHHHHHSCSSSSSSEEEEEEEEETTTEEEEEEEEECCC
T ss_pred HCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECHHHHHHHHHHEEECC
T ss_conf 4047748879999999999838878899889999995899589876325229
|
| >d1mkfa_ b.116.1.1 (A:) Viral chemokine binding protein m3 {Murid herpesvirus 4, MuHV-4 [TaxId: 33708]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Viral chemokine binding protein m3 superfamily: Viral chemokine binding protein m3 family: Viral chemokine binding protein m3 domain: Viral chemokine binding protein m3 species: Murid herpesvirus 4, MuHV-4 [TaxId: 33708]
Probab=100.00 E-value=0 Score=27963.39 Aligned_cols=1 Identities=0% Similarity=-0.261 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 hssgvstqsvdlsqikrgdeiqahcltpaetevtecagilkdvlsknlhelqglcnvknkmgvpwvsveelgqeiitgRL 80 (371)
T d1mkfa_ 1 HSSGVSTQSVDLSQIKRGDEIQAHCLTPAETEVTECAGILKDVLSKNLHELQGLCNVKNKMGVPWVSVEELGQEIITGRL 80 (371)
T ss_dssp CCSEEEECCCCTTTSTTHHHHHHHHSSSCCSSTHHHHHHHHHHHHHCTTGGGGGCSEEEEEEEECEEEGGGTEEEEEECC
T ss_pred CCCCCCCCCCCHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHCCCC
T ss_conf 98774343323888445425665207821003677778899987642887751430244468846569884125500676
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 P~Ps~~~~~~~~~vrVLV~AEs~tpee~P~~~~~A~~~m~T~~~~~~LsD~N~~F~s~~~~vW~i~i~k~~VD~~mLT~A 160 (371)
T d1mkfa_ 81 PFPSVGGTPVNDLVRVLVVAESNTPEETPEEEFYAYVELQTELYTFGLSDDNVVFTSDYMTVWMIDIPKSYVDVGMLTRA 160 (371)
T ss_dssp CCSSCCCCTTSCEEEEEEEEECCCCSSCCSSCCCEEEEEECSSCEEEECGGGEEEEETTEEEEEEEEEGGGSSTTCEEEE
T ss_pred CCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHEEEEEEEEEECCCCEEEEECCEEEEEEECCHHEECHHHHHHH
T ss_conf 77755787667648999995179987880788765441044554785024643787400279999646001122143355
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~FL~~~P~~k~T~mi~Y~~TFTWCGeigai~e~~~P~PS~~A~~PVC~~~~RY~~~kF~~~DGC~~Et~~~~~s~i~P~~ 240 (371)
T d1mkfa_ 161 TFLEQWPGAKVTVMIPYSSTFTWCGELGAISEESAPQPSLSARSPVCKNSARYSTSKFCEVDGCTAETGMEKMSLLTPFG 240 (371)
T ss_dssp EESSCCTTCEEEEEEEEETTEEEEEEEEEECTTSCCBCCSEEEEETTSSGGGGSSSTTTTTTTCCGGGTSCCEEECSCTT
T ss_pred HHHHHCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEECCCCCCCCCCCCCCEEECCCC
T ss_conf 67754767608998436565053403254368778997610038542004665347524136743000555640555578
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~P~~qa~mNTC~C~~KY~~~~L~~~~~i~i~~ia~~~~~~~P~YVm~~YF~St~~N~~~~s~~L~~C~~~mtsH~G~~~~ 320 (371)
T d1mkfa_ 241 GPPQQAKMNTCPCYYKYSVSPLPAMDHLILADLAGLDSLTSPVYVMAAYFDSTHENPVRPSSKLYHCALQMTSHDGVWTS 320 (371)
T ss_dssp SCSSCEEEESTHHHHHHCSSCCCCCSCEEEEEEECGGGCCSCEEEEEEEECCCCCCTTSCCCCEEEEEEEEEEETTEEEE
T ss_pred CCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCEEE
T ss_conf 98440303532058882476577334188876225233467406788750666667668898644899998743673013
Q ss_pred --------------------------------------------------E
Q ss_conf --------------------------------------------------8
Q 002647 518 --------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------a 518 (897)
-
T Consensus 321 ~~s~QCP~~~~~G~~q~VL~~~~~pt~~~~iVGvsi~~eGQq~Ri~Y~Gdh 371 (371)
T d1mkfa_ 321 TSSEQCPIRLVEGQSQNVLQVRVAPTSMPNLVGVSLMLEGQQYRLEYFGDH 371 (371)
T ss_dssp CCCSSCCEEEEECSSTTEEEEEECGGGGGGEEEEEEEETTEEEEEESSCCC
T ss_pred EECCCCCEEEEECCCEEEEEEEECCCCCCCEEEEEEEECCCEEEEECCCCC
T ss_conf 313557556730676068999982466764056999974700021012589
|
| >d1r53a_ d.258.1.1 (A:) Chorismate synthase, AroC {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Chorismate synthase, AroC superfamily: Chorismate synthase, AroC family: Chorismate synthase, AroC domain: Chorismate synthase, AroC species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=27962.38 Aligned_cols=1 Identities=0% Similarity=-0.426 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 MnsfG~~lr~ttfGESHG~alg~vidG~PaG~~i~~~~I~~~L~RR~pG~~~~~t~R~E~D~veilSGv~~G~TtGsPI~ 80 (371)
T d1r53a_ 1 MSTFGKLFRVTTYGESHCKSVGCIVDGVPPGMSLTEADIQPQLTRRRPGQSKLSTPRDEKDRVEIQSGTEFGKTLGTPIA 80 (371)
T ss_dssp CCEECSSSEEEEECCTTSSEEEEEEECCCTTCBCCGGGTHHHHHTTCC------------CCCEECSSEETTEECSSCEE
T ss_pred CCCCCCCEEEEEEECCCCCEEEEEEECCCCCCEECHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEECCCCEE
T ss_conf 98776534898415478884489980508588838999999996459999998866899984899243208978455207
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~I~N~d~~s~dy~~~~~~pRPGHAD~~~~~kyg~~d~~gggrsSaReTa~rvaaGaia~~~L~~~~gI~v~s~V~~IG~ 160 (371)
T d1r53a_ 81 MMIKNEDQRPHDYSDMDKFPRPSHADFTYSEKYGIKASSGGGRASARETIGRVASGAIAEKFLAQNSNVEIVAFVTQIGE 160 (371)
T ss_dssp EEEEC-----------------------------------------CCCHHHHHHHHHHHHHHHHTTCCEEEEEEEEETT
T ss_pred EEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECC
T ss_conf 88814532310010133324668741776764486533565415688899999999999999998489799999998611
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 i~~~~~~~d~~~~~~~~~~~~~~~~~~~~vrc~D~~~~~~m~~~I~~ak~~gDSlGGivev~~~gvP~GLG~p~fdkLda 240 (371)
T d1r53a_ 161 IKMNRDSFDPEFQHLLNTITREKVDSMGPIRCPDASVAGLMVKEIEKYRGNKDSIGGVVTCVVRNLPTGLGEPCFDKLEA 240 (371)
T ss_dssp EECCCCTTCHHHHHHHHHCCHHHHHHTCTTCCCCHHHHHHHHHHHHHHHHTTCCCCEEEEEEEESCCTTCSBTTTBCHHH
T ss_pred EECCCCCCCHHHHHCCCHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCH
T ss_conf 77154345612332214465655553196107886888999999999972599755089999970589877720044145
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~LA~A~mSIpAVKgVEfG~GF~~a~~~GSe~nD~~~~~~~~g~~~~~tN~aGGi~GGiSnG~pi~~rva~KP~sSi~~~q 320 (371)
T d1r53a_ 241 MLAHAMLSIPASKGFEIGSGFQGVSVPGSKHNDPFYFEKETNRLRTKTNNSGGVQGGISNGENIYFSVPFKSVATISQEQ 320 (371)
T ss_dssp HHHHHHHTSTTBCCCEETTTTGGGGSCHHHHHCSBC--------CBCCCCSCSEETTEECSSCEEEEEEECCC-------
T ss_pred HHHHHHHCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCC
T ss_conf 88887742410025650456117645562247762205788864245688777546764896069999857810046877
Q ss_pred --------------------------------------------------E
Q ss_conf --------------------------------------------------8
Q 002647 518 --------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------a 518 (897)
.
T Consensus 321 ~Tvd~~~~~~~~~~~gRhDpc~vpra~pV~Eam~alvlad~~L~~~~~d~~ 371 (371)
T d1r53a_ 321 KTATYDGEEGILAAKGRHDPAVTPRAIPIVEAMTALVLADALLIQKARDFS 371 (371)
T ss_dssp ----------------CCCSCHHHHTHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 547757978776106988981726548999999999999999998516789
|
| >d1to6a_ c.141.1.1 (A:) Glycerate kinase GlxK {Neisseria meningitidis, (serogroup A) [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Glycerate kinase I superfamily: Glycerate kinase I family: Glycerate kinase I domain: Glycerate kinase GlxK species: Neisseria meningitidis, (serogroup A) [TaxId: 487]
Probab=100.00 E-value=0 Score=27961.32 Aligned_cols=1 Identities=0% Similarity=-2.054 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 MkiliApDsFKgslsA~ea~~ai~~g~~~~~p~~~~~~~P~aDGGEGt~dal~~~~~g~~~~~~v~gplg~~v~a~~~~~ 80 (371)
T d1to6a_ 1 MKIVIAPDSFKESLTAQQVAEAIKRGFQQSIADVECLLCPVGDGGEGTVDAIRHSLDLEEKCLQVTGSFGQKEVMRYFQK 80 (371)
T ss_dssp CEEEECCCCBTTTBCHHHHHHHHHHHHHHHCTTCEEEECCCCSSSTTHHHHHHTTSCCEEEEEEEECTTSSEEEEEEEES
T ss_pred CEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHCCCEEEEEEEECCCCCCEEEEEECC
T ss_conf 90999943888862899999999999998599988999730648543999999863997999999899998157899637
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~tAvIE~A~asGL~l~~~~~r~p~~~tT~G~GelI~~Al~~G~~~iilglGGSAT~DgG~G~L~ALG~~f~D~~g~~l~ 160 (371)
T d1to6a_ 81 EQLALFEVADLVGLGKIPLEKRNPLQIQTRGIGELIRHLISQEIKEIYIGVGGTASNDGGIGIAAGLGYQFYDEDGNALP 160 (371)
T ss_dssp SSEEEEETHHHHBGGGSCTTSCCTTSCCCHHHHHHHHHHHHTTCCEEEEEECSBCCCSTTHHHHHTTTCEEECTTSCBCC
T ss_pred CCEEEEHHHHHCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCEECCCCCCCC
T ss_conf 87543016663676303887777112246119999999997699769997158636616789999614536888999888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~g~~L~~i~~id~~~~~~~l~~v~~~ia~DV~npL~G~~GAa~vfgpQKGa~~~~v~~le~~l~~~a~~~~~~~~~~~g 240 (371)
T d1to6a_ 161 ACGQSLLNLASVSTENRYKIPEDVHIRILADVVSPLCGHQGATYTFGKQKGLDSTMFEVVDQAIQDFYEKVSPATLKLKG 240 (371)
T ss_dssp SSGGGGGTCCEEECSSCCCCCTTCEEEEEESCCCCSSSTTSHHHHHSGGGTCCGGGHHHHHHHHHHHHHHHCGGGGGCTT
T ss_pred CCCHHHHHHHCCCCCCCCCHHHCCEEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCHHHCCCCC
T ss_conf 86153675002662368711342849999556765547878645650445887899999999999999984311015678
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~gaAGG~~~~l~~~l~a~~~~G~~~v~~~~~l~~~i~~aDlVITGEG~~D~QSl~GK~p~~va~~ak~~~pviai~G~v~ 320 (371)
T d1to6a_ 241 AGAGGGIAGGLCAFAQASIVSGIDTCLDLIDFDKKVSDVDLVIVGEGRLDRQSLAGKAPIGVAKRTPVGVPVVAICGSLV 320 (371)
T ss_dssp TTTTTTHHHHHHHHSCCEEEEHHHHHHHHTTHHHHTTTCSEEEECCSEECSTTTTTCHHHHHHTTSCTTCCEEEEESEEC
T ss_pred CCCHHHHHHHHHHHHCCEECCCHHHHHHHHCHHHHHCCCCEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCEEEEECCCC
T ss_conf 63102578999999588846509999988599978356998997887552321265767999999767998899977557
Q ss_pred --------------------------------------------------E
Q ss_conf --------------------------------------------------8
Q 002647 518 --------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~~~Gi~~~~si~~~~~~l~~a~~~a~~~L~~~a~~i~r~l~~~~~ 371 (371)
T d1to6a_ 321 EDLPSLPFENIQAAFSILEKSEPLEDSLKNASLYLEHTASNIGHLLNMPKI 371 (371)
T ss_dssp TTCCCSSBTTEEEEEECCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHSCCC
T ss_pred CCHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 886678754962999758899999999998999999999999999842379
|
| >d1aj8a_ a.103.1.1 (A:) Citrate synthase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Citrate synthase superfamily: Citrate synthase family: Citrate synthase domain: Citrate synthase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=100.00 E-value=0 Score=27959.49 Aligned_cols=1 Identities=0% Similarity=-1.058 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~rGL~gv~v~~T~Is~idg~~G~L~YRG~~i~dLa~~~sfEeVa~LL~~G~lP~~~el~~f~~~l~~~~~lp~~~~~~~ 80 (371)
T d1aj8a_ 1 LAKGLEDVYIDQTNICYIDGKEGKLYYRGYSVEELAELSTFEEVVYLLWWGKLPSLSELENFKKELAKSRGLPKEVIEIM 80 (371)
T ss_dssp CCGGGTTCEEEEESSEEEETTTTEEEETTEEHHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred CCCCCCCCEEEEEECCEEECCCCEEEECCEEHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 99777998162686712768988799988769998646999999999977979899999999999997168988999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~p~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~a~~~~i~~~~~~~~~~~~~~~p~~~~~~a~~~l~~~ 160 (371)
T d1aj8a_ 81 EALPKNTHPMGALRTIISYLGNIDDSGDIPVTPEEVYRIGISVTAKIPTIVANWYRIKNGLEYVPPKEKLSHAANFLYML 160 (371)
T ss_dssp HHSCTTCCHHHHHHHHHHHHHHHSTTTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTSCHHHHHHHHH
T ss_pred HHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 86114641267777776410110100124310146788899999999999999999837998879860056899987652
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~g~~~~~~~~~~l~~~Lvl~aDHg~n~Stfa~r~vaSt~~d~~~a~~ag~~al~G~~hgga~~~~~~~~~~~~~~~~~~~ 240 (371)
T d1aj8a_ 161 HGEEPPKEWEKAMDVALILYAEHEINASTLAVMTVGSTLSDYYSAILAGIGALKGPIHGGAVEEAIKQFMEIGSPEKVEE 240 (371)
T ss_dssp HSSCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHHHHHHHHHHHHCSGGGHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHH
T ss_conf 38878879999999999983677777620656654115775202888888871542011016799999985065420699
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~v~~~l~~~~~i~GfGH~vy~~~DPRa~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pNvd~~~~~l~~~lg~p 320 (371)
T d1aj8a_ 241 WFFKALQQKRKIMGAGHRVYKTYDPRARIFKKYASKLGDKKLFEIAERLERLVEEYLSKKGISINVDYWSGLVFYGMKIP 320 (371)
T ss_dssp HHHHHHHHTCCCTTBCCSSCSSCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTTTTCCBCTTTTHHHHHHTTTCC
T ss_pred HHHHHHHCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC
T ss_conf 99998624776544472211466606889999887630003568999999999987421798838188999999983998
Q ss_pred --------------------------------------------------E
Q ss_conf --------------------------------------------------8
Q 002647 518 --------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~lf~~~R~~G~~AH~~Eq~~~~~l~RP~~~YvG~~~~~~~~i~~r~ 371 (371)
T d1aj8a_ 321 IELYTTIFAMGRIAGWTAHLAEYVSHNRIIRPRLQYVGEIGKKYLPIELRR 371 (371)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHTTCCCCCCEEEECSCCCBCCCCGGGCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCHHHCC
T ss_conf 566669999999999999999998679973855401699899987767659
|
| >d1c8ba_ c.56.1.2 (A:) Germination protease {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphorylase/hydrolase-like superfamily: HybD-like family: Germination protease domain: Germination protease species: Bacillus megaterium [TaxId: 1404]
Probab=100.00 E-value=0 Score=27959.41 Aligned_cols=1 Identities=0% Similarity=-1.025 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 m~~~~~l~~y~iRTDLAlEa~E~~~e~~~~~~~~~ei~GV~~~e~~~~~ikiT~V~I~e~Ga~~mgKp~G~YiTiEap~l 80 (371)
T d1c8ba_ 1 MEKELDLSQYSVRTDLAVEAKDIALENQPKPNNQSEIKGVIVKEKEEQGVKISMVEITEEGAEAIGKKKGRYVTLESVGI 80 (371)
T ss_dssp CCCCCCCCCCCCCCCCTTHHHHHHHHHCCC---------CCCSEEEEEEEETTEEEEEEEECHHHHTTTTSCCEEEEEEE
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEEECCHHHHHHCCCCCCEEEEECCCC
T ss_conf 98655521143537878988998865320113467668769888862986899999782689985899851799846877
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~D~~~~~e~~~~v~a~~l~~l~~~~~~~~~~~vLVVGLGN~~VTPDALGP~vv~~l~VTRHL~~~~p~~~~~g~r~Vs 160 (371)
T d1c8ba_ 81 REQDTEKQEEAMEEVFAKELNFFIKSLNIPDDASCLVVGLGNLSVTPDALGPKAVDNLLITRHLFELQPESVQDGFRPVS 160 (371)
T ss_dssp CCCSSSSSSHHHHHHHHHHHHHHHHHTTCCTTCCEEEEECSCSSSGGGCHHHHHHTTCCCCHHHHHHSCCSSCSSCCCEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCHHEECCEEEEHHHHHHCCHHHCCCCCEEE
T ss_conf 75678899999999999999999863178988817999688877786563701113363343045547254507871256
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 aIaPGVmg~TGiET~EIIkgiVek~kPD~VIaIDALAaRs~~Rln~TIQIsDTGI~PGSGVGN~R~~l~~etLGVPVIAI 240 (371)
T d1c8ba_ 161 AIVPGVMGMTGIETSDIIFGVVKKVNPDFIIAIDALAARSIERVNATIQISDSGIHPGSGVGNKRKEISYETLGIPVIAI 240 (371)
T ss_dssp EECSGGGCCCSSCHHHHHHHHHHHHCCSEEEEEEEECCSSGGGSSSEEEEETTCBCSCSSSSCCCCBSSSCCC-------
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECHHHCCCHHHCCCEEEECCCCCCCCCCCCCCCCCCCHHHCCCCEEEE
T ss_conf 88587550344249999999987518989999601013752333564786677858887767555637987829988997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 GVPTVVdAatI~~Dtid~~~~~~~~~~~e~~~~s~~l~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ek~~Li 320 (371)
T d1c8ba_ 241 GIPTVVDAVSITSDTIDFILKHFGREMKEQGKPSKSLLPSGMTFGEKKKLTEDDLPNEEQRQTYLGMIGTLPDEEKRRLI 320 (371)
T ss_dssp --CCCEEEEEEECCEESCCCHHHHTTTTTCC---------------------------------CCCCSSCCCTTHHHHH
T ss_pred CCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 68806601998789999999987543201346531113332333422222222343112204688776246889999999
Q ss_pred --------------------------------------------------E
Q ss_conf --------------------------------------------------8
Q 002647 518 --------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------a 518 (897)
-
T Consensus 321 ~EvL~P~~~~l~VTPKeID~~I~~~s~iIs~giN~ALhp~i~~e~~~~y~~ 371 (371)
T d1c8ba_ 321 HEVLAPLGHNLMVTPKEVDMFIEDMANVVAGGLNAALHHEVDQENFGAYTH 371 (371)
T ss_dssp HHHTCSSCTTEEEEETTHHHHHHHHHHHHHHHHGGGGSCCCCSCCCCSSCC
T ss_pred HHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC
T ss_conf 997572479655675738999999999999898898677888778764339
|
| >d1n7oa1 a.102.3.2 (A:170-540) Hyaluronate lyase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Chondroitin AC/alginate lyase family: Hyaluronate lyase-like catalytic, N-terminal domain domain: Hyaluronate lyase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=0 Score=27958.95 Aligned_cols=1 Identities=0% Similarity=-0.991 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~d~y~~lr~~w~~~~~G~~~~~~~d~~~~~~~~~l~~~a~~~~~~~~~~~~~~~lw~dl~~~~~~~~~~~~~~rL~~mA 80 (371)
T d1n7oa1 1 VKDTYTDRLDDWNGIIAGNQYYDSKNDQMAKLNQELEGKVADSLSSISSQADRIYLWEKFSNYKTSANLTATYRKLEEMA 80 (371)
T ss_dssp CCSHHHHHHHHHHHHHTCGGGCCTTCHHHHHHHHHHHHHHHHHHHHSCCSSSCSSSCGGGCCTTSTHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 96489999999999863745677687899999999999999999872135677777789987775147999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~ay~~pgs~lY~d~~l~~~I~~al~~l~~~~y~~~~~~~gNWw~~~Ig~P~~l~~~lill~~~l~~~~~~~~~~~i~~~~ 160 (371)
T d1n7oa1 81 KQVTNPSSRYYQDETVVRTVRDSMEWMHKHVYNSEKSIVGNWWDYEIGTPRAINNTLSLMKEYFSDEEIKKYTDVIEKFV 160 (371)
T ss_dssp HHHTCTTSTTTTCHHHHHHHHHHHHHHHHHTSSTTCCCCSCHHHHHTHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHC
T ss_pred HHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
T ss_conf 99859998553699999999999999997089888888898303640758999999988311169999999999999867
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 p~p~~~~~~~~~~~~~TGaN~vd~a~~~i~~glL~~d~~~v~~a~~~i~~v~~~v~~gdG~~~DgSf~qH~~~~Y~G~YG 240 (371)
T d1n7oa1 161 PDPEHFRKTTDNPVKALGGNLVDMGRVKVIAGLLRKDDQEISSTIRSIEQVFKLVDQGEGFYQDGSYIDHTNVAYTGAYG 240 (371)
T ss_dssp CCTTEECTTSSSCEECCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGGSCCSSSSEECTTSCEEETTTEECTTTHH
T ss_pred CCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCCEECCCCEECCCCEECCCCCH
T ss_conf 88212035677866064116999899999999986799999999999887741102688440377601257622167513
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~l~~~~~~~~~l~gT~~~~~~~~~~~l~~~i~~g~~~~~~~G~~~d~v~GR~ISR~~~~~~~~g~~~~~~~~~l~~~~ 320 (371)
T d1n7oa1 241 NVLIDGLSQLLPVIQKTKNPIDKDKMQTMYHWIDKSFAPLLVNGELMDMSRGRSISRANSEGHVAAVEVLRGIHRIADMS 320 (371)
T ss_dssp HHHHHHHHHHHHHHTTSSSCCCHHHHTHHHHHHHHTTGGGEETTEECGGGSGGGGGCTTCCHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 99999999999997799888897899999999995433010555015557886225788666414899999999985149
Q ss_pred --------------------------------------------------E
Q ss_conf --------------------------------------------------8
Q 002647 518 --------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~~~~~iK~~i~~~~~~~~~~~~~~~~~~~~~~~ll~d~~i~~~p~ 371 (371)
T d1n7oa1 321 EGETKQRLQSLVKTIVQSDSYYDVFKNLKTYKDISLMQSLLSDAGVASVPR 371 (371)
T ss_dssp CHHHHHHHHHHHHHHHHHCSSSCGGGGCCSHHHHHHHHHHHHCTTSCCCCC
T ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
T ss_conf 999999999999999966875452225345789999999865898898998
|
| >d1f1sa1 a.102.3.2 (A:249-619) Hyaluronate lyase {Streptococcus agalactiae [TaxId: 1311]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Chondroitin AC/alginate lyase family: Hyaluronate lyase-like catalytic, N-terminal domain domain: Hyaluronate lyase species: Streptococcus agalactiae [TaxId: 1311]
Probab=100.00 E-value=0 Score=27958.07 Aligned_cols=1 Identities=0% Similarity=-0.394 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~d~y~~l~~~w~~~~~G~~~~d~~d~~~~~~~~~~~~~a~~~~~~~~~~~~~~~lw~dl~~~~~s~~~~~~~~rL~~mA~ 80 (371)
T d1f1sa1 1 EDNFTKLLDKWNDVTIGNYVYDTNDSNMQKLNQKLDETNAKNIEAIKLDSNRTFLWKDLDNLNNSAQLTATYRRLEDLAK 80 (371)
T ss_dssp CSHHHHHHHHHHHHHTCGGGCCTTCHHHHHHHHHHHHHHHHHHHHCCCCTTCSCSCGGGCCTTSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 97699999999998638766786677899999999999999998612676656667899977752589999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 aY~~pgs~ly~d~~l~~~I~~aL~~l~~~~y~~~~~~~~~~NWW~~eIg~P~~l~~~lill~d~l~~~~~~~~~~~i~~~ 160 (371)
T d1f1sa1 81 QITNPHSTIYKNEKAIRTVKESLAWLHQNFYNVNKDIEGSANWWDFEIGVPRSITGTLSLMNNYFTDAEIKTYTDPIEHF 160 (371)
T ss_dssp HHTCTTSTTTTCHHHHHHHHHHHHHHHHHTSSTTCCCCTTSCHHHHHTHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHH
T ss_pred HHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf 98499985547999999999999999983899876688989861123175799999998720015999999999999987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~p~p~~~~~~~~~~~~~TGaN~vd~a~~~i~~glL~~d~~~v~~a~~~i~~v~~~v~~gdG~~~DgSfiqH~~v~Y~G~Y 240 (371)
T d1f1sa1 161 VPDAEYFRKTLVNPFKALGGNLVDMGRVKIIEGLLRKDNTIIEKTSHSLKNLFTTATKAEGFYADGSYIDHTNVAYTGAY 240 (371)
T ss_dssp CCCTTEESTTSSCCEECCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGSCCBSSSSEEBTTSCEEETTTEECTTTH
T ss_pred CCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHCCCCEECCCCC
T ss_conf 78813322567886636522699999999999998289999999999876561103578723047661004670006762
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 G~~~l~~~~~~~~~l~gT~~~~~~~~~~~l~~~i~~g~~~~~~~g~~~~~v~GR~IsR~~~~~~~~g~~~~~~~~~l~~~ 320 (371)
T d1f1sa1 241 GNVLIDGLTQLLPIIQETDYKISNQELDMVYKWINQSFLPLIVKGELMDMSRGRSISREAASSHAAAVEVLRGFLRLANM 320 (371)
T ss_dssp HHHHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHHTTGGGEETTEECGGGSGGGGGCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 39999999999999767988888789999999999700456357643565677622478876632799999999987334
Q ss_pred --------------------------------------------------E
Q ss_conf --------------------------------------------------8
Q 002647 518 --------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~~~~~~vK~~i~~~~~~~~~~~~~~~~~~~~~~~ll~d~~I~~~p 371 (371)
T d1f1sa1 321 SNEERNLDLKSTIKTIITSNKFYNVFNNLKSYSDIANMNKLLNDSTVATKP 371 (371)
T ss_dssp CCSHHHHHHHHHHHHHHHHCCSSCGGGGCCSHHHHHHHHHHHHCTTSCCCC
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHHHHCCCCCCCCC
T ss_conf 989999999999999984587644100645599999999985578888898
|
| >d1eg1a_ b.29.1.10 (A:) Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) {Trichoderma reesei, Endoglucanase I [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Concanavalin A-like lectins/glucanases superfamily: Concanavalin A-like lectins/glucanases family: Glycosyl hydrolase family 7 catalytic core domain: Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) species: Trichoderma reesei, Endoglucanase I [TaxId: 51453]
Probab=100.00 E-value=0 Score=27954.26 Aligned_cols=1 Identities=0% Similarity=-0.227 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 QQ~Gt~t~E~HP~ltwq~CT~~ggCt~~~g~vV~Danwrw~H~~~~~~c~~gn~~~~~lCpd~~tCa~nC~ldgaDY~~~ 80 (371)
T d1eg1a_ 1 EQPGTSTPEVHPKLTTYKCTKSGGCVAQDTSVVLDWNYRWMHDANYNSCTVNGGVNTTLCPDEATCGKNCFIEGVDYAAS 80 (371)
T ss_dssp CEECSSSCCCCCBCCEEEEETTTEEEEECCEEEECGGGSCEECTTCCBSEETTEECTTTCSSSHHHHHHCEECCCCTTTT
T ss_pred CCCCCCCCCCCCCCEEEECCCCCCCEEECCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC
T ss_conf 98887767548851447515899827723569980573202006986543388655234887566776246557763675
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 GVttsG~sltL~~~~~~~~~~~~~vGsRvYLl~~d~~Yqmf~Llg~EftFdVD~S~lpCGlNgALYfveM~adGg~s~~n 160 (371)
T d1eg1a_ 81 GVTTSGSSLTMNQYMPSSSGGYSSVSPRLYLLDSDGEYVMLKLNGQELSFDVDLSALPCGENGSLYLSQMDENGGANQYN 160 (371)
T ss_dssp TEEECSSEEEEESCEECSSSSEECCCCEEEEECTTSSBCCBCCTTSEEEEEECTTSCCTTEEEEEEEECCCTTTTCCSSC
T ss_pred CEEECCCCEEEEEEEECCCCCCCEECCEEEEECCCCCEEEEEECCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCC
T ss_conf 26951884789999824766532023327997588837888726971688864478875223366665226568966667
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~aGA~YGtGYCDAQCp~~~w~~g~~~~g~~G~CC~EmDIwEANs~A~a~TpH~C~~~~CD~~GC~~NpYR~g~~~fyG~G 240 (371)
T d1eg1a_ 161 TAGANYGSGYCDAQCPVQTWRNGTLNTSHQGFCCNEMDILEGNSRANALTPHSCTATACDSAGCGFNPYGSGYKSYYGPG 240 (371)
T ss_dssp CCGGGGTCCCCCTTCCBCSEETTEECTTCCBCCCCEEEEEEECSSCBCBEEECBCSSCBCSSCCCBCTTTTTCTTTSSTT
T ss_pred CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 66663675323166873332136677578753035401015454134202434568741888867774555786211489
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~tVDT~k~fTVVTQF~t~~~t~~G~LtEIrR~YVQ~GkvI~n~~~~~~~~~~~~~~~~~ggl~~mg~al~rGmVLv~SlW 320 (371)
T d1eg1a_ 241 DTVDTSKTFTIITQFNTDNGSPSGNLVSITRKYQQNGVDIPSAQPGGDTISSCPSASAYGGLATMGKALSSGMVLVFSIW 320 (371)
T ss_dssp SSSCTTSCEEEEEEEEETTSSTTSCEEEEEEEEEETTEECCCSSTTCEEECCCSGGGGGTTTHHHHHHHHHCBEEEEEEE
T ss_pred CCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEEECCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEEE
T ss_conf 63026897389988665898664434477579997998902776566644454442336889999888608869999979
Q ss_pred --------------------------------------------------E
Q ss_conf --------------------------------------------------8
Q 002647 518 --------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------a 518 (897)
-
T Consensus 321 dd~~~~M~WLDs~~~GpC~~~~g~p~~ve~~~p~a~V~~SNIKfG~I~ST~ 371 (371)
T d1eg1a_ 321 NDNSQYMNWLDSGNAGPCSSTEGNPSNILANNPNTHVVFSNIRWGDIGSTT 371 (371)
T ss_dssp ECTTTTTHHHHBGGGCSBCTTTTCHHHHHHHCTTCEEEEEEEEEESTTTCC
T ss_pred ECCCCCCEEECCCCCCCCCCCCCCHHHHHHCCCCCEEEEEECEECCCCCCC
T ss_conf 279998523058988888888898668623289977998727583787889
|
| >d1r85a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Bacillus stearothermophilus, Xt6 [TaxId: 1422]
Probab=100.00 E-value=0 Score=27952.12 Aligned_cols=1 Identities=0% Similarity=0.537 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~~~~~~~p~l~~~~~~~f~~G~av~~~~l~~~~~~~~~~~~Fn~~t~eN~mKW~~iep~~G~~n~~~aD~~v~~a~~n 80 (371)
T d1r85a_ 1 KPHISALNAPQLDQRYKNEFTIGAAVEPYQLQNEKDVQMLKRHFNSIVAENVMKPISIQPEEGKFNFEQADRIVKFAKAN 80 (371)
T ss_dssp CCCCBGGGSCCHHHHHTTTCEEEEEECGGGGGCHHHHHHHHHHCSEEEESSTTSHHHHCSBTTBCCCHHHHHHHHHHHHT
T ss_pred CCCCCCCCCHHHHHHHHCCCEEEEECCHHHCCCHHHHHHHHHHCCEECCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 99664255664999860578387843755547988999999866900326467634124779925838899999999987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 gi~vrGH~LvW~~~~P~W~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~~I~~v~~rY~g~I~~WDVvNE~~~~~~~~r 160 (371)
T d1r85a_ 81 GMDIRFHTLVWHSQVPQWFFLDKEGKPMVNETDPVKREQNKQLLLKRLETHIKTIVERYKDDIKYWDVVNEVVGDDGKLR 160 (371)
T ss_dssp TCEEEEECSCCSTTCCGGGGBCTTSSBGGGCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEESCBCTTSSBC
T ss_pred CCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCC
T ss_conf 99787767786233354101256666444445422333699999999999999999974897528998731106998733
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~g~dyi~~af~~A~~~~~p~~~L~~Ndy~~~~~~k~~~~~~~v~~l~~~g~pidgIG~Q~H~~~~~~~~~~i~ 240 (371)
T d1r85a_ 161 NSPWYQIAGIDYIKVAFQAARKYGGDNIKLYMNDYNTEVEPKRTALYNLVKQLKEEGVPIDGIGHQSHIQIGWPSEAEIE 240 (371)
T ss_dssp CCHHHHHHTTHHHHHHHHHHHHHHCTTSEEEEEESCTTSTTHHHHHHHHHHHHHHTTCCCCEEEECCEECSSSSCHHHHH
T ss_pred CCCHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHH
T ss_conf 37522115858999999999986687546665145644440258999999999977997441433412367998889999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~l~~~a~~Gl~i~ITElDV~~~~~~~~~~~~~~~~~~e~~~~QA~~y~~~~~~~~~~~p~v~git~WG~~D~~sW~~~~ 320 (371)
T d1r85a_ 241 KTINMFAALGLDNQITELDVSMYGWPPRAYPTYDAIPKQKFLDQAARYDRLFKLYEKLSDKISNVTFWGIADNHTWLDSR 320 (371)
T ss_dssp HHHHHHHHTTCEEEEEEEEECSSCSSCCCCSSGGGSCHHHHHHHHHHHHHHHHHHHHTGGGEEEEEESSSSTTSCGGGGG
T ss_pred HHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCC
T ss_conf 99999997399237866674167776445766542328999999999999999999638974599986898797446788
Q ss_pred --------------------------------------------------E
Q ss_conf --------------------------------------------------8
Q 002647 518 --------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pLlfD~~~~pKpAy~ai~d~~ 371 (371)
T d1r85a_ 321 ADVYYDANGNVVVDPNAPYAKVEKGKGKDAPFVFGPDYKVKPAYWAIIDHK 371 (371)
T ss_dssp CCEEECTTSCEECCTTSCCSEEETTCSCCCCSSBCTTSBBCHHHHHHHSCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC
T ss_conf 865435545533222222222235677788734689988977999986349
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=0 Score=27950.57 Aligned_cols=1 Identities=0% Similarity=-1.290 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~ 80 (371)
T d1k8kc_ 1 AYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTL 80 (371)
T ss_dssp CEEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred CCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEEE
T ss_conf 95789998838999989999999994889899998889978999995588998889999799999999979993999862
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s 160 (371)
T d1k8kc_ 81 KGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGS 160 (371)
T ss_dssp ETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCC
T ss_conf 03321100122322110001111111211000002576302544203343311100101112221111111111100013
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~ 240 (371)
T d1k8kc_ 161 CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLA 240 (371)
T ss_dssp TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEE
T ss_pred CCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEE
T ss_conf 47679998401576431001221111111101124404766747898751233210000147860588641012100000
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~v~s~~fs~d~~~la~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (371)
T d1k8kc_ 241 SETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGL 320 (371)
T ss_dssp CSSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCC
T ss_pred CCCCCCEEEEECCCCCEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCEE
T ss_conf 14665203654699979999819926787760898628872020676542124622001685065205871245566141
Q ss_pred --------------------------------------------------E
Q ss_conf --------------------------------------------------8
Q 002647 518 --------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------a 518 (897)
.
T Consensus 321 ~~~H~~~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~~~~~~~~~~l~~~ 371 (371)
T d1k8kc_ 321 DSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLESALKDLKIV 371 (371)
T ss_dssp SSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHHHHCTTCCCC
T ss_pred CCCCCCCEEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCHHHHCCEECC
T ss_conf 255569889999948998656799999189939999698684653587639
|
| >d2fnua1 c.67.1.4 (A:2-372) Spore coat polysaccharide biosynthesis protein C {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Spore coat polysaccharide biosynthesis protein C species: Helicobacter pylori [TaxId: 210]
Probab=100.00 E-value=0 Score=27956.38 Aligned_cols=1 Identities=0% Similarity=-0.826 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
|
T Consensus 1 k~~~~~~p~~~~~~~~~v~~~l~~~~~~~G~~v~~fE~~~~~~~g~k~ai~~~Sgt~Al~~al~al~~~~~~~~eVi~p~ 80 (371)
T d2fnua1 1 KEFAYSEPCLDKEDKKAVLEVLNSKQLTQGKRSLLFEEALCEFLGVKHALVFNSATSALLTLYRNFSEFSADRNEIITTP 80 (371)
T ss_dssp CCEESCCCCCCHHHHHHHHHHHTSSCCSSSHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHSSCCCTTSCEEEECS
T ss_pred CEECCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHCCCCCCCCEEECCC
T ss_conf 92067899899999999999981898668977999999999997829399982689999999999544579977052013
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~t~~a~~~ai~~~G~~pv~vDi~~~~~~~~~~~~~~~~~~t~avi~vh~~G~~~~~~~i~~~~~~~~i~lIEDaaqa~Ga 160 (371)
T d2fnua1 81 ISFVATANMLLESGYTPVFAGIKNDGNIDELALEKLINERTKAIVSVDYAGKSVEVESVQKLCKKHSLSFLSDSSHALGS 160 (371)
T ss_dssp SSCTHHHHHHHHTTCEEEECCBCTTSSBCGGGSGGGCCTTEEEEEEECGGGCCCCHHHHHHHHHHHTCEEEEECTTCTTC
T ss_pred CCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHCCCC
T ss_conf 44332200022058632123332223221012333046200001123445653334532121102220011314441586
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~G~~g~~~~~Sf~~~K~l~~g~GG~i~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~G~n~r~sel~Aaigl~ 240 (371)
T d2fnua1 161 EYQNKKVGGFALASVFSFHAIKPITTAEGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLS 240 (371)
T ss_dssp EETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHHH
T ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 01030478643222335566534320154578762122200000012101122322222311256510033145555544
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 qL~~l~~~~~~R~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~L~~~gI~~~~~y~pl~~ 320 (371)
T d2fnua1 241 QLKKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKFFTCKKLILESLHKRGILAQVHYKPIYQ 320 (371)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGGGGGHHHHHHHHHHTTEECBCCCCCGGG
T ss_pred HHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCC
T ss_conf 43211210334443310001212223333332233333333333322222221067999999999879984144765112
Q ss_pred --------------------------------------------------E
Q ss_conf --------------------------------------------------8
Q 002647 518 --------------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------------a 518 (897)
=
T Consensus 321 ~~~~~~~~~~~~~pnae~~~~~~l~LP~~~~lt~~di~~I~~~i~~~~~~~ 371 (371)
T d2fnua1 321 YQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFESF 371 (371)
T ss_dssp SHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 898884266689989999984959896888889999999999999999748
|
| >d2dexx3 d.126.1.5 (X:294-663) Peptidylarginine deiminase Pad4, catalytic C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Pentein, beta/alpha-propeller superfamily: Pentein family: Peptidylarginine deiminase Pad4, catalytic C-terminal domain domain: Peptidylarginine deiminase Pad4, catalytic C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27883.93 Aligned_cols=1 Identities=0% Similarity=-0.726 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 APwimtpnt~~p~eV~v~~~~~n~~Fi~~v~~l~~~a~~~l~i~~~~~~~~DrW~QDe~E~GY~qaP~~~~pVvldspR~ 80 (370)
T d2dexx3 1 APWIMTPNTQPPQEVYACSIFENEDFLKSVTTLAMKAKCKLTICPEEENMDDQWMQDEMEIGYIQAPHKTLPVVFDSPRN 80 (370)
T ss_dssp CCCBCCCTTSCEEEEEECCCSSCHHHHHHHHHHHHHTTCEEEECCHHHHTTCCCTTTSEEEEEEEETTEEEEEEEECTTC
T ss_pred CCEEECCCCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEECCCCCCEEEECCCCCCCEEEECCCC
T ss_conf 98574689998648999861268999999999999729956746524578980300021130342689974558607220
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~gl~~fp~~~llg~dfG~~tr~~~~~~v~~lDSfGNLEvsPPvt~~Gk~YPlGRIliG~s~~~~~~gr~m~~~v~dFL~A 160 (370)
T d2dexx3 81 RGLKEFPIKRVMGPDFGYVTRGPQTGGISGLDSFGNLEVSPPVTVRGKEYPLGRILFGDSCYPSNDSRQMHQALQDFLSA 160 (370)
T ss_dssp SGGGGHHHHTTSBTTBEEEECSCSSSCCCGGGSGGGEEECCCEEETTEEETTCCEEEEECSSCCTTCCCCCHHHHHHHHH
T ss_pred CCCHHCHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 33011527774178753387348877642023567734479862588426777488547788876545330899999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 Q~VQ~Pv~L~sdWL~VGHVDEf~~FvPa~~~kgfrlLlAsP~a~~~Ll~~~q~~GhG~a~~f~g~~~~~~~tI~~iL~d~ 240 (370)
T d2dexx3 161 QQVQAPVKLYSDWLSVGHVDEFLSFVPAPDRKGFRLLLASPRSCYKLFQEQQNEGHGEALLFEGIKKKKQQKIKNILSNK 240 (370)
T ss_dssp SGGGCCEEEECTTBSSCCGGGTEEEEECSSGGGEEEEEEEHHHHHHHHHHHHHTTCTTCEETTTCTTSCCEEHHHHHHCH
T ss_pred HCCCCCCEECCCHHHCCCCCCEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHHCCH
T ss_conf 64599802305201057401017876369998538996388999999999987578646504655444221199986387
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~l~~~N~~~q~~Id~nr~iLKrELGLte~DIIdiP~LF~~~~~~~A~a~fP~mVNmlVlg~~L~iPkPfGP~inG~c~le 320 (370)
T d2dexx3 241 TLREHNSFVERCIDWNRELLKRELGLAESDIIDIPQLFKLKEFSKAEAFFPNMVNMLVLGKHLGIPKPFGPVINGRCCLE 320 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEECCEEECGGGCEEESSCCTTSCEEETTEEEEECCCCCEETTEEHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEHHH
T ss_conf 78999999998631789999987099867731253440545878621237641666874033067899788488630799
Q ss_pred -------------------------------------------------E
Q ss_conf -------------------------------------------------8
Q 002647 518 -------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------a 518 (897)
-
T Consensus 321 e~v~~lleplGl~c~FiDD~~sYh~~~GeVHcgTNv~R~pf~~kWW~~~p 370 (370)
T d2dexx3 321 EKVCSLLEPLGLQCTFINDFFTYHIRHGEVHAGTNVRRKPFSFKWWNMVP 370 (370)
T ss_dssp HHHHHHHGGGTCEEEEECCTTTTGGGTCCTTTTEEEEECCCSSCGGGCCC
T ss_pred HHHHHHHCCCCCEEEEECCCHHHHHCCCEEEECCCCCCCCCCCCCCCCCC
T ss_conf 99999745478758995473788861772540464441788866702689
|
| >d2hgsa4 d.142.1.6 (A:3-201,A:304-474) Eukaryotic glutathione synthetase ATP-binding domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: Eukaryotic glutathione synthetase ATP-binding domain domain: Eukaryotic glutathione synthetase ATP-binding domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27880.38 Aligned_cols=1 Identities=0% Similarity=-1.157 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~l~d~~~~~~l~~~a~dwa~~hGl~m~~~~~~~~~~~~~~aP~tL~Pspfpr~~F~~a~~vq~~~neL~~~vS~D 80 (370)
T d2hgsa4 1 TNWGSLLQDKQQLEELARQAVDRALAEGVLLRTSQEPTSSEVVSYAPFTLFPSLVPSALLEQAYAVQMDFNLLVDAVSQN 80 (370)
T ss_dssp CCSGGGGSCHHHHHHHHHHHHHHHHHTTCEEECSSCTTCCSSEEECCEESSCCEECHHHHHHHHHTHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99876588889999999999999997483654688888878345578685577687899999999999999999999737
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~fL~~~l~~~~~~D~Ft~~L~~i~~~v~~~g~~q~l~Lgl~RSDYMl~~~~~~~~~~KQVE~NTIS~sfggls~~v~~l 160 (370)
T d2hgsa4 81 AAFLEQTLSSTIKQDDFTARLFDIHKQVLKEGIAQTVFLGLNRSDYMFQRSADGSPALKQIEINTISASFGGLASRTPAV 160 (370)
T ss_dssp HHHHHHHHHTHHHHCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECSSSCEEEEEEEEECSSCCCHHHHHHSHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHCCCCCCCCCCEEEEEECEEEEECCHHHHHHHHH
T ss_conf 99999999877414799999999999999617866259988200654167777665424786112330002176648999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 Hr~l~~~~~~~~~~~~~p~n~~~~~la~gla~a~~~y~~~KKvQQ~La~pgvLe~Fl~~~~~~~~~lr~tFa~ly~LD~~ 240 (370)
T d2hgsa4 161 HRHVLSVLSKTKEAGKILSNNPSKGLALGIAKAWELYGSTKKVQQELSRPGMLEMLLPGQPEAVARLRATFAGLYSLDVG 240 (370)
T ss_dssp HHHHHHHTTCHHHHTTSCCCCHHHHHHHHHHHHHHHHCCSHHHHHHTTSTTHHHHHSTTCHHHHHHHHHTCCCEEECSSS
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999862555421348899717999999999999974466778987498779987089889999999962314506887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~g~~a~~~a~~~p~~~VLKPQrEGGGnniyg~dI~~~L~~l~~~~e~~ayILMerI~P~~~~~~~vr~g~~~~~~~~iS 320 (370)
T d2hgsa4 241 EEGDQAIAEALAAPSRFVLKPQREGGGNNLYGEEMVQALKQLKDSEERASYILMEKIEPEPFENCLLRPGSPARVVQCIS 320 (370)
T ss_dssp HHHHHHHHHHHHSGGGEEEEESCCSSSCCBCHHHHHHHHHHHTTSGGGGGEEEEECCCCCCEEEEEECTTSCCEEEEEEE
T ss_pred CCCHHHHHHHHHCCHHEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCEEECCCCC
T ss_conf 45269999767390227755632477651015488999997688676667899974378776865898896022056132
Q ss_pred -------------------------------------------------E
Q ss_conf -------------------------------------------------8
Q 002647 518 -------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------a 518 (897)
+
T Consensus 321 ElGifG~~l~~~~~~~~N~~~G~LlRTK~~~~~EGGVaaG~g~lDSpylv 370 (370)
T d2hgsa4 321 ELGIFGVYVRQEKTLVMNKHVGHLLRTKAIEHADGGVAAGVAVLDNPYPV 370 (370)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEEEETTCSSCCTTTTSCEEECCEEC
T ss_pred CCCCCEEEEECCCEEEEECCCEEEEECCCCCCCCCCEECCEECCCCCCCC
T ss_conf 22243799957987997165107886278988887810254206686649
|
| >d2gx8a1 c.135.1.1 (A:4-373) Nif3-related protein BC4286 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NIF3 (NGG1p interacting factor 3)-like superfamily: NIF3 (NGG1p interacting factor 3)-like family: NIF3 (NGG1p interacting factor 3)-like domain: Nif3-related protein BC4286 species: Bacillus cereus [TaxId: 1396]
Probab=100.00 E-value=0 Score=27880.35 Aligned_cols=1 Identities=0% Similarity=-1.888 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~p~~~eii~~le~~~P~~lAe~wDnvGL~vg~~~~~V~~I~valD~t~~vi~eAi~~~adlIItHHPl~f~~~k~l~~~~ 80 (370)
T d2gx8a1 1 IPNGHEIISLFESMYPKHLAMEGDKIGLQIGALNKPVRHVLIALDVTEEVVDEAIQLGANVIIAHHPLIFNPLKAIHTDK 80 (370)
T ss_dssp CCBHHHHHHHHHHHSCGGGSCTTCCCEEEESCSSSBCCEEEEESSCCHHHHHHHHHHTCCEEEESSCSCCSCCSCCCTTS
T ss_pred CCCHHHHHHHHHHHCCHHHCCCCCCCEEEECCCCCCCCEEEEEECCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCC
T ss_conf 99789999999986999671567987379689977649899997699999999997799999979987768964466788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~li~~~I~vys~HTnlD~~~~G~nd~La~~Lgl~~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~agag~ 160 (370)
T d2gx8a1 81 AYGKIIEKCIKNDIAIYAAHTNVDVAKGGVNDLLAEALGLQNTEVLAPTYAEEMKKVVVFVPVTHAEEVRKALGDAGAGH 160 (370)
T ss_dssp HHHHHHHHHHHTTCEEEECCHHHHHSTTSHHHHHHHHTTCEEEEEEEEEEEEEEEEEEEEECHHHHHHHHHHHHHTTTTC
T ss_pred CHHHHHHHHHHCCCEEEEECCCHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHCCHHCCCCC
T ss_conf 05699999997897699932402105775799999984897533335555555542389817256666653000037875
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ig~y~~~~~~~~g~G~~~~~~~~~P~ig~~~~~~~~~e~~~e~~~~~~~~~~v~~al~~ahpy~~~~~~~~~~~~~~~~~ 240 (370)
T d2gx8a1 161 IGNYSHCTFSSEGTGTFVPQEGTNPYIGETGQLERVEEVRIETIIPASLQRKVIKAMVTAHPYEEVAYDVYPLDNKGETL 240 (370)
T ss_dssp BTTEEEEEEEEEEEEEEEEC-----------CCEEEEEEEEEEEEEGGGHHHHHHHHHHHSSSSSCCEEEEEEEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHEEEECHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCC
T ss_conf 45632131013676541477788875676785664131430220427778889998887288610133421234655555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 G~Grig~l~~p~~l~~~~~~vk~~l~~~~vr~~g~~~~~I~~VAvc~GSG~s~i~~a~~~gaDv~ITGe~k~h~~~dA~~ 320 (370)
T d2gx8a1 241 GLGKIGYLQEEMTLGQFAEHVKQSLDVKGARVVGKLDDKVRKVAVLGGDGNKYINQAKFKGADVYVTGDMYYHVAHDAMM 320 (370)
T ss_dssp EEEEEEEEEEEEEHHHHHHHHHHHTTCSCCEEESCTTSEEEEEEEEEEECGGGHHHHHHTTCSEEEEECCCHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHH
T ss_conf 76459993786039999999998719982899588887423799973662789999987799899982886799999997
Q ss_pred -------------------------------------------------E
Q ss_conf -------------------------------------------------8
Q 002647 518 -------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------a 518 (897)
.
T Consensus 321 ~gi~lId~GH~sE~~~~~~l~~~L~~~~~~~~~~i~v~~S~~~~dP~~~i 370 (370)
T d2gx8a1 321 LGLNIVDPGHNVEKVMKQGVQKQLQEKVDAKKLNVHIHASQLHTDPFIFV 370 (370)
T ss_dssp HTCEEEECCGGGGGHHHHHHHHHHHHHHHHTTCCCEEEECCCCCCCCCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEC
T ss_conf 69979978832628999999999999750048856999954778976449
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27878.25 Aligned_cols=1 Identities=100% Similarity=1.400 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~i~f~~~~y~p~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (370)
T d2iw1a1 1 IVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGDCPKAFELIQVPVKSHTNHGRNAEYYAWVQNHLKEHPA 80 (370)
T ss_dssp CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEECSCCCTTCEEEECCCCCSSHHHHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 98999148899998999999999999977997999956787788886389986765544301158899999999986165
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 d~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (370)
T d2iw1a1 81 DRVVGFNKMPGLDVYFAADVCYAEKVAQEKGFLYRLTSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQTEPER 160 (370)
T ss_dssp SEEEESSCCTTCSEEECCSCCHHHHHHHHCCHHHHTSHHHHHHHHHHHHHHSTTCCCEEEESCHHHHHHHHHHHCCCGGG
T ss_pred CEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCHHCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCCCCCE
T ss_conf 52531036723789987622441046630474200040000067889999742157469982479999999860999642
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 i~vi~~gv~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~gr~~~~Kg~~~li~a~~~l~~~~~~~~~~ii~g~~~~~~ 240 (370)
T d2iw1a1 161 FQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKPRK 240 (370)
T ss_dssp EEECCCCCCGGGSGGGSCTTHHHHHHHHTTCCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSCCHH
T ss_pred EEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCEEEECCCCCCCCC
T ss_conf 89997402222112467656666654304888663699998514554203332011123323322100000112222223
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~v~ps~~E~~~~~~~EAma~G~PvI~s~~~g~~e~i~~~~~G~l~~~~ 320 (370)
T d2iw1a1 241 FEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEP 320 (370)
T ss_dssp HHHHHHHHTCGGGEEEESCCSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCHHHHHCCCCCEEEECCC
T ss_conf 22222222222222223323344422233334443222234331133214577039993899718885279836998699
Q ss_pred -------------------------------------------------E
Q ss_conf -------------------------------------------------8
Q 002647 518 -------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------a 518 (897)
|
T Consensus 321 ~d~~~la~~i~~ll~d~~~~~~~~~~ar~~~~~~~~~~~~~~~~~ii~g~ 370 (370)
T d2iw1a1 321 FSQEQLNEVLRKALTQSPLRMAWAENARHYADTQDLYSLPEKAADIITGG 370 (370)
T ss_dssp CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC
T ss_conf 99999999999997699999999999999999828547999999998485
|
| >d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Pepsin(ogen) species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=0 Score=27878.14 Aligned_cols=1 Identities=0% Similarity=-0.560 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~v~ipl~k~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~d~~Y~~~i~iGtP~Q~~~vi~DTGSs 80 (370)
T d3psga_ 1 LVKVPLVRKKSLRQNLIKDGKLKDFLKTHKHNPASKYFPEAAALIGDEPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSS 80 (370)
T ss_dssp CEEEEEEECCCHHHHHHHTTCHHHHHHHCCCCGGGGTCTTSCCSSCCCTTGGGTTCCEEEEEEETTTTEEEEEEEETTCC
T ss_pred CEEEECCCCCCHHHHHHHCCCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCCC
T ss_conf 98981510735889988728289998761146455305555576464033134687799999986898389999967989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~Wv~~~~C~~~~~~~~~~yd~~~Sst~~~~~~~~~~~Yg~Gs~~G~~~~d~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 160 (370)
T d3psga_ 81 NLWVPSVYCSSLACSDHNQFNPDDSSTFEATSQELSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYAP 160 (370)
T ss_dssp CEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEEEEEEEESSSCEEEEEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGCS
T ss_pred CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEEEEECEEEEEEEEEEEEECCCCEECCCC
T ss_conf 82897865787332566621787564423679718999578359999999778650101211389999603674021456
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~Gi~gl~~~~~~~~~~~~~~~~l~~~~~i~~~~fs~~l~~~~~~~g~l~~Gg~d~~~~~~~l~~~p~~~~~~w~v~~~~ 240 (370)
T d3psga_ 161 FDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSVEGYWQITLDS 240 (370)
T ss_dssp CSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSEETTEEEEECE
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCEEECCCCCCHHCCCCEEEEEECCCCEEEEEEEE
T ss_conf 66644545674345688763453554054442226888605888771386378583330341158864135537998724
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 i~v~g~~~~~~~~~~aiiDSGTs~~~lp~~~~~~i~~~l~~~~~~~~~~~~~C~~~~~~P~l~f~f~g~~~~l~~~~yi~ 320 (370)
T d3psga_ 241 ITMDGETIACSGGCQAIVDTGTSLLTGPTSAIANIQSDIGASENSDGEMVISCSSIDSLPDIVFTIDGVQYPLSPSAYIL 320 (370)
T ss_dssp EESSSSEEECTTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEECTTCCEECCGGGGGGCCCEEEEETTEEEEECHHHHEE
T ss_pred EEECCEEEECCCCCCEEEECCCCEEECCHHHHHHHHHHHCCEEECCCCEEEECCCCCCCCEEEEEECCEEEEECHHHEEE
T ss_conf 87299677048970179845886275789999999998587260389677744226778619999899999988599399
Q ss_pred -------------------------------------------------E
Q ss_conf -------------------------------------------------8
Q 002647 518 -------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------a 518 (897)
+
T Consensus 321 ~~~~~c~~~~~~~~~~~~~~~~~ILG~~flr~~y~vfD~~~~~IGfAp~a 370 (370)
T d3psga_ 321 QDDDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp ECSSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred ECCCEEEEEEEECCCCCCCCCCEEECHHHHCCEEEEEECCCCEEEEEECC
T ss_conf 82992899999744589889719998896667999998999999899649
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=100.00 E-value=0 Score=27876.96 Aligned_cols=1 Identities=100% Similarity=1.700 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pkkV~IIGaG~aGLsaA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~~~g~~ 80 (370)
T d2iida1 1 RNPLAECFQENDYEEFLEIARNGLKATSNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWY 80 (370)
T ss_dssp CCTTGGGGCCTTHHHHHHHHHHCSCCCSSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTTTEE
T ss_pred CCCHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCCE
T ss_conf 98557615881489999987647999999996999898889999999998789988999589988770678764877702
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~d~G~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (370)
T d2iida1 81 ANLGPMRLPEKHRIVREYIRKFDLRLNEFSQENDNAWYFIKNIRKKVGEVKKDPGLLKYPVKPSEAGKSAGQLYEESLGK 160 (370)
T ss_dssp EESSCCCEETTCHHHHHHHHHTTCCEEEECSCCTTSEEEETTEEEEHHHHHHCGGGGCCCCCGGGTTCCHHHHHHHHTHH
T ss_pred ECCCCEEECCCCHHHHHHHHHHCCCCCEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 32575563276489999999838763101025786279618852220233322455433320355543467777887877
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 240 (370)
T d2iida1 161 VVEELKRTNCSYILNKYDTYSTKEYLIKEGDLSPGAVDMIGDLLNEDSGYYVSFIESLKHDDIFAYEKRFDEIVDGMDKL 240 (370)
T ss_dssp HHHHHHHSCHHHHHHHHTTSBHHHHHHHTSCCCHHHHHHHHHHTTCGGGTTSBHHHHHHHHHHHTTCCCEEEETTCTTHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
T ss_conf 88988742125666530100179999873255577887752100121001467776421001212566655404569999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~l~~~~g~~i~~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~aD~VI~A~p~~~l~~i~~~p~l~~~~~~ai~~~~~~~ 320 (370)
T d2iida1 241 PTAMYRDIQDKVHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSRAVRLIKFNPPLLPKKAHALRSVFTPY 320 (370)
T ss_dssp HHHHHHHTGGGEESSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCHHHHTTSEEESCCCHHHHHHHHHCCCTT
T ss_pred HHHHHHHCCCCCCCCCEEEEEEEECCEEEEEEEECCCCEEEEEEEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHCCCCC
T ss_conf 99999864876336864789888099189999964898179990078853898999607048999899999998337863
Q ss_pred -------------------------------------------------E
Q ss_conf -------------------------------------------------8
Q 002647 518 -------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~~~~~~~g~v~~aGd~~~~~~~~~~~a~~sG~~aA~~i~~a~~~ 370 (370)
T d2iida1 321 QFQHFSDPLTASQGRIYFAGEYTAQAHGWIDSTIKSGLRAARDVNLASEN 370 (370)
T ss_dssp HHHHHHHHHHCCBTTEEECSGGGSSSSSCHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 10234504306668779963201378851099999999999999864249
|
| >d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Brevibacterium sterolicum [TaxId: 1702]
Probab=100.00 E-value=0 Score=27876.63 Aligned_cols=1 Identities=0% Similarity=-1.556 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~dvIVVGsG~aG~v~A~rLaeaG~~VlvLEaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (370)
T d3coxa1 1 TLADGDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSWDTPGSDGKIFCGMLNPDKRSMWLADKTDQPVSNFMGFG 80 (370)
T ss_dssp CCCTTCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCSCSCCTTSCSSCCSSSCCTTSBBSCSBCCCSSCSBTTBS
T ss_pred CCCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98888899799978478999999999878793999967899887654533221113455443334544445544543456
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vGG~S~~~~~~~~r~~~~df~~~~~~~~~~~~~~~~y~~~e~~lgv~~~~~~~ 160 (370)
T d3coxa1 81 INKSIDRYVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAVTPKRNYFEEILPSVDSNEMYNKYFPRANTGLGVNNIDQAW 160 (370)
T ss_dssp CCCBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHCTTSCHHHHHHTHHHHHHHHHTCBCCCHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 67656535664445578862156420356555015865524897885223556873788999999999750876444776
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~a~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~s~~~~~L~~a~~~g~~~i 240 (370)
T d3coxa1 161 FESTEWYKFARTGRKTAQRSGFTTAFVPNVYDFEYMKKEAAGQVTKSGLGGEVIYGNNAGKKSLDKTYLAQAAATGKLTI 240 (370)
T ss_dssp HHHCGGGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTSSCCSTTTTCSTTCCSSSBCCGGGTHHHHHHHTTCEEE
T ss_pred CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEE
T ss_conf 66788860889999999974986334664345565655444345531224522364443436837877899985898489
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~t~~~V~~I~~~~~~~~~V~v~~~~~~~~~~~~~~~~A~~VILaAGai~Tp~LLL~S~~~~~l~~~s~~vG~~~g~~~~~ 320 (370)
T d3coxa1 241 TTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKLLVSMKAQGHLPNLSSQVGEGWGVLLNK 320 (370)
T ss_dssp ECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHHHHHHHHTTSSTTSCTTTTCCBSSCTTT
T ss_pred EECCCEEEEEECCCCEEEEEEEEECCCCCEEEEEEEECCEEEEEECHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCC
T ss_conf 73673899998499718999999588662322899989999995078885999996789897998877667885664575
Q ss_pred -------------------------------------------------E
Q ss_conf -------------------------------------------------8
Q 002647 518 -------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------a 518 (897)
.
T Consensus 321 ~~~~~g~~~~~~~~~~~d~~~~pg~~~~np~~t~~a~a~~~~~~~~~~~~ 370 (370)
T d3coxa1 321 ATDNFGRLPEYPGLYVVDGSLVPGNVGVNPFVTITALAERNMDKIISSDI 370 (370)
T ss_dssp TSCTTSBCTTSTTEEECSGGGSCSCCSSCSHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 55666544687774576334366766768205379998878998875029
|
| >d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Tomato (Lycopersicon esculentum) [TaxId: 4081]
Probab=100.00 E-value=0 Score=27874.49 Aligned_cols=1 Identities=0% Similarity=0.238 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~v~~~g~~f~~nG~~~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~~k~~G~N~vR~~~~~~~~~~~~~~~~g~~~~~~ 80 (370)
T d1rh9a1 1 NNFVYTDGTHFALNGKSLYINGFNAYWLMYIAYDPSTRIKVTNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQM 80 (370)
T ss_dssp CCCCEEETTEEEETTEEECEEEEECTTHHHHHHSTTTTHHHHHHHHHHHHTTCCEEEEESSCSSSSSCSEEETTEECHHH
T ss_pred CCCEEEECCEEEECCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCHHH
T ss_conf 99679989999999999999999526675011588999999999999998799199979856766765678887546788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 l~~ld~~l~~a~~~Gi~vi~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~~~~~~~ 160 (370)
T d1rh9a1 81 FQGLDFVISEAKKYGIHLIMSLVNNWDAFGGKKQYVEWAVQRGQKLTSDDDFFTNPMVKGFYKNNVKVVLTRVNTITKVA 160 (370)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCBSSSSSSBHHHHHHHHHHTTCCCCCGGGGGTCHHHHHHHHHHHHHHHHCBCTTTCSB
T ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999986999999624443212687555410025777677521124899999999999999998641666765
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~v~~~~l~NEp~~~~~~~~~~~~~~~~~~~~~ir~~dp~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (370)
T d1rh9a1 161 YKDDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLKSIDSNHLLEIGLEGFYGNDMRQYNPNSYIFGTNFISNNQVQ 240 (370)
T ss_dssp GGGCTTEEEEESCBSCCCTTCTTSHHHHHHHHHHHHHHHHHCCSSEEECCCCCCCCGGGGGGSGGGCCCSCCHHHHHTST
T ss_pred HCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 16870365300036666677543688999999999999965899749984221456544656777444565110235688
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~D~~~~h~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kPv~i~EfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (370)
T d1rh9a1 241 GIDFTTIHMYPNQWLPGLTQEAQDKWASQWIQVHIDDSKMLKKPLLIAEFGKSTKTPGYTVAKRDNYFEKIYGTIFNCAK 320 (370)
T ss_dssp TCCCEEEECCHHHHSTTSCHHHHHHHHHHHHHHHHHHHHHHTSCEEEEECCCCTTSTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 66088753246765567760245667788999999999757975998453676789988889999999999999999998
Q ss_pred -------------------------------------------------E
Q ss_conf -------------------------------------------------8
Q 002647 518 -------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~G~~~W~~~~~~~~~~~dg~g~~~~d~~~t~~~~~~~~~~~~~~~ 370 (370)
T d1rh9a1 321 SGGPCGGGLFWQVLGQGMSSFDDGYQVVLQESPSTSRVILLQSLRLSKLS 370 (370)
T ss_dssp TTCSEEEEEESCBCCTTCGGGCCSCCBCGGGCHHHHHHHHHHHHHHTTCC
T ss_pred HCCCEEEEEEEEECCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCC
T ss_conf 58980899982154788767799845866897228999999999986249
|
| >d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Adenine nucleotide alpha hydrolase-like superfamily: Nucleotidylyl transferase family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain domain: Arginyl-tRNA synthetase (ArgRS) species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=27875.91 Aligned_cols=1 Identities=0% Similarity=-0.559 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 p~p~~~~~i~vEf~SpN~~kplHvGHlRs~iiGd~laril~~~G~~V~r~nyigD~G~Qi~~l~~~~~~~~~~~~~~~~~ 80 (370)
T d1iq0a2 1 PFPRRPGVVLVEHTSVNPNKELHVGHLRNIALGDAIARILAYAGREVLVLNYIDDTGRQAAETLFALRHYGLTWDGKEKY 80 (370)
T ss_dssp CCCCEEEEEEEECCCCCTTSCCBHHHHHHHHHHHHHHHHHHHTTEEEEEEEEECTTSHHHHHHHHHHHHTTCCCCSSSCH
T ss_pred CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCH
T ss_conf 99999986999863899998864311361799999999999769979899847976499999999999856153346544
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~y~~~~~~~~~~~~~~~~~e~~~~le~~~~~~~~~~~l~~~~~~l~~l~v~fD~~~~Es~l~~~~~~~~~i~~l 160 (370)
T d1iq0a2 81 DHFAGRAYVRLHQDPEYERLQPAIEEVLHALERGELREEVNRILLAQMATMHALNARYDLLVWESDIVRAGLLQKALALL 160 (370)
T ss_dssp HHHHHHHHHHHHHCTTTGGGHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHHTTCCCSEEEEHHHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECEEEEECCCCCCCCHHHHHHHH
T ss_conf 56644324666542788888899999999987666999999999888865411331101012202322364146667666
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~ga~~~d~~~~~~~~~~~~~vl~ksDG~~tY~t~DiAy~~~K~~~~~~~~~~~~~~~~~~~i~i~~ 240 (370)
T d1iq0a2 161 EQSPHVFRPREGKYAGALVMDASPVIPGLEDPFFVLLRSNGTATYYAKDIAFQFWKMGILEGLRFRPYENPYYPGLRTSA 240 (370)
T ss_dssp TTSTTEECCSSSTTTTCEEEECTTTSCSCSCCEEEEECTTSCBCHHHHHHHHHHHHTTSSCCCEEEECCCSSCTTCEEEE
T ss_pred HHCCCEEECCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEECCHHHHHHHHCCCCCCCCEECCCCCCCCEEEEEC
T ss_conf 52361441246665447983374355566674003685267725862079987601033222110024467663267632
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~d~~~~~~~~d~~iyVvd~~Q~~h~~~v~~~~~~~g~~~~~~~~~hv~~g~v~~~g~kMStR~G~~v~l~dll~ea~~~a 320 (370)
T d1iq0a2 241 PEGEAYTPKAEETINVVDVRQSHPQALVRAALALAGYPALAEKAHHLAYETVLLEGRQMSGRKGLAVSVDEVLEEATRRA 320 (370)
T ss_dssp EEEEECCCCCSEEEEEEESSSCCCHHHHHHHHHHTTCHHHHTTEEEEEECCEEETTBCSCC----CCBHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHCEEEEEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHH
T ss_conf 43443202356788887124047999999999981998034111257899983378534356887458999999999999
Q ss_pred -------------------------------------------------E
Q ss_conf -------------------------------------------------8
Q 002647 518 -------------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------------a 518 (897)
=
T Consensus 321 ~~~~~~r~~~~~~~~~~a~~vgi~avky~~L~~~~~~~~~Fd~d~~lsfe 370 (370)
T d1iq0a2 321 RAIVEEKNPDHPDKEEAARMVALGAIRFSMVKTEPKKQIDFRYQEALSFE 370 (370)
T ss_dssp HHHHHHHCTTCSCHHHHHHHHHHHHHHHHHHHSCTTSCEEECHHHHHCSS
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHEEHHHHHCCCCCCCEECHHHHCCCC
T ss_conf 99998508982008999987616632225864589998568789921479
|
| >d1itua_ c.1.9.7 (A:) Renal dipeptidase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Renal dipeptidase domain: Renal dipeptidase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27805.31 Aligned_cols=1 Identities=0% Similarity=0.039 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~e~A~~lh~~~pViD~H~D~~~~l~~~~~~~~~~~~~~~~~~~~ghvDlprlr~Ggv~~q~faifv~~~~~~~~~~~ 80 (369)
T d1itua_ 1 DFFRDEAERIMRDSPVIDGHNDLPWQLLDMFNNRLQDERANLTTLAGTHTNIPKLRAGFVGGQFWSVYTPCDTQNKDAVR 80 (369)
T ss_dssp CHHHHHHHHHHTTSCEEEEEECHHHHHHHHHTTCTTSGGGCTTTCCSSSCCHHHHHHTTEEEEEEEECCCGGGTTTTHHH
T ss_pred CHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCHHHHH
T ss_conf 94789999996489989834328999998733333444344355888865799999669987999998078777759999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~al~~id~~~~~~~~~~d~~~~~~s~~di~~a~~~gkiavil~iEg~~~l~~dl~~L~~~y~lGvR~i~Lt~n~~N~~a~ 160 (369)
T d1itua_ 81 RTLEQMDVVHRMCRMYPETFLYVTSSAGIRQAFREGKVASLIGVEGGHSIDSSLGVLRALYQLGMRYLTLTHSCNTPWAD 160 (369)
T ss_dssp HHHHHHHHHHHHHHHCTTTEEECCSHHHHHHHHHHTCEEEEEEEECGGGGTTCHHHHHHHHHTTEEEEESCSSSCCSSBC
T ss_pred HHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCC
T ss_conf 99999999999999688768973157899998743672788414345311256799999986495598722687887777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~g~~~~~~~GLt~~G~~~V~emn~lGmiiDlSH~s~~~~~dv~~~s~~PviaSHsn~ral~~h~RNl~De~l~aI 240 (369)
T d1itua_ 161 NWLVDTGDSEPQSQGLSPFGQRVVKELNRLGVLIDLAHVSVATMKATLQLSRAPVIFSHSSAYSVCASRRNVPDDVLRLV 240 (369)
T ss_dssp BGGGGGTSSCCSSSSBCHHHHHHHHHHHHHTCEEECTTBCHHHHHHHHHHCSSCCEESSCCBTTTSCCTTSBCHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHCCCCHHHHHHH
T ss_conf 75433577876678867678999998641481666487868899988612577456424026654033338998999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 a~~GGviGi~~~~~fl~~~~~~~~~~~~~hi~~~~~l~G~dhVgiGsDfdg~~~~p~gl~~~~~~p~l~~~L~~rG~se~ 320 (369)
T d1itua_ 241 KQTDSLVMVNFYNNYISCTNKANLSQVADHLDHIKEVAGARAVGFGGDFDGVPRVPEGLEDVSKYPDLIAELLRRNWTEA 320 (369)
T ss_dssp HHHTCEEEECCCHHHHTSSSCCBHHHHHHHHHHHHHHHCGGGEEECCCTTSCSCCCBTCSSTTCHHHHHHHHHHTTCCHH
T ss_pred HHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHH
T ss_conf 96597488850564212330236899999999999870952179865678999998777787788999999998699999
Q ss_pred ------------------------------------------------E
Q ss_conf ------------------------------------------------8
Q 002647 518 ------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------a 518 (897)
.
T Consensus 321 ~i~ki~g~N~lRv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (369)
T d1itua_ 321 EVKGALADNLLRVFEAVEQASNLTQAPEEEPIPLDQLGGSCRTHYGYSS 369 (369)
T ss_dssp HHHHHHTHHHHHHHHHHHHHCCSSSCCCCCCCCGGGCCSSSCCCTTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCC
T ss_conf 9999998869999999999998613876789984572765441578899
|
| >d1rwha1 a.102.3.2 (A:4-372) Chondroitinase AC {Arthrobacter aurescens [TaxId: 43663]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Chondroitin AC/alginate lyase family: Hyaluronate lyase-like catalytic, N-terminal domain domain: Chondroitinase AC species: Arthrobacter aurescens [TaxId: 43663]
Probab=100.00 E-value=0 Score=27803.82 Aligned_cols=1 Identities=0% Similarity=-0.559 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~d~~~lr~rw~~~l~g~~~~~~~d~~~~~~l~~l~~~a~~~~~~~~~~~~~~~lW~dl~~~~sa~~~~~~~rl~~mA 80 (369)
T d1rwha1 1 PGAAEFAALRNRWVDQITGRNVIQAGDPDFAKAITALNNKAADSLAKLDAAAGRTSVFTDLSLAKDAEMVTTYTRLSQLA 80 (369)
T ss_dssp CCHHHHHHHHHHHHHHHHCTTCCCTTCHHHHHHHHHHHHHHHHHHHTBCCCTTCSCSBTTCCTTSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 96679999999999997488766657878999999999999999997335677666688887886278999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~Ay~~pgs~~y~d~~l~~~I~~al~~l~~~~~~~~~~~~gNWW~~eIg~P~~l~~~liLl~d~l~~~~~~~~~~~i~~f~ 160 (369)
T d1rwha1 81 TAWATPTAAVFGDAAVLAAIKAGLADANTLCYNDRKEEVGNWWSWEIGVPRALADAMVLLHAELSAAERTAYCAAIDHFV 160 (369)
T ss_dssp HHHTSTTSTTTTCHHHHHHHHHHHHHHHHHTSSTTCCCCSCHHHHHTHHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHC
T ss_pred HHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
T ss_conf 99819999542699999999999999997188789999999101532858999999998502179899999999999866
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 pdp~~~~~~~~~~~~~tGaNrvd~a~~~i~~glL~~d~~~v~~a~~~i~~v~~~vt~gdGf~~DgSf~qH~~~~Y~G~YG 240 (369)
T d1rwha1 161 PDPWLQFPPKRGKITSVGANRVDLCQGIIIRSLAGEDPTKLNHAVAGLSQVWQYVTSGDGIFRDGSFIQHSTTPYTGSYG 240 (369)
T ss_dssp SCTTEESCGGGCCEECCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHGGGGGSCBSSSSEEBTTSCEEETTTEECTTTHH
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCEECCCCCH
T ss_conf 78643346667752252009999999999999980899999999998641122245897423477636304442166425
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~l~~~~~~~~~l~gT~~~~~~~~~~~l~~~i~~g~~~~i~~g~m~~~v~GR~ISR~~~~~~~~g~~~~~~~~~la~~~ 320 (369)
T d1rwha1 241 VVLLTGLSKLFSLLGGTAFEVSDPTRSIFFDAVEGSFAPVMINGAMADAVRGRSISREANTGYDLGASAIEAILLLARAM 320 (369)
T ss_dssp HHHHHHHHHHHHHHTTSTTCCCCGGGHHHHHHHHHTTGGGEETTEECGGGSGGGGGCTTSCHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 99999999999997799898887899999999995003462577116667887100788776168999999999998519
Q ss_pred ------------------------------------------------E
Q ss_conf ------------------------------------------------8
Q 002647 518 ------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~~~~~vk~~i~~d~~~~~~~~~~~~~~~~~~~l~~~~~~p~~~ 369 (369)
T d1rwha1 321 DPATAARWRGLCAGWIARDTYRPILNSASVPRTALVKQLEATGVAPVAE 369 (369)
T ss_dssp CHHHHHHHHHHHHHHHHTCCSSCTTTTCCHHHHHHHHHHHHHTCCCCCC
T ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
T ss_conf 9999999999999998718765544676522689999986067783889
|
| >d2ewoa1 d.126.1.6 (A:2-370) Agmatine iminohydrolase {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Pentein, beta/alpha-propeller superfamily: Pentein family: Porphyromonas-type peptidylarginine deiminase domain: Agmatine iminohydrolase species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=0 Score=27803.34 Aligned_cols=1 Identities=0% Similarity=-1.656 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~tp~~~g~rmPaEwep~~~~~l~wP~~~~~w~~~~~~~~~~~~~i~~~ia~~e~V~~~v~~~~~~~a~~~~~~~ 80 (369)
T d2ewoa1 1 AKRIKNTTPKQDGFRMPGEFEKQKQIWMLWPWRNDNWRLGAKPAQKAFLEVAEAISEFEPVSLCVPPLQYENALARVSEL 80 (369)
T ss_dssp CCEECSSCHHHHTCCCCCTTSCEEEEEECCCCCTTTSSGGGHHHHHHHHHHHHHHHTTSCEEEEECGGGHHHHHHHHHTT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHC
T ss_conf 98567899301387878872416069998789986303578999999999999985898699998938999999998536
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~i~~~~~~~dD~W~RD~GP~~v~~~~g~~~~vdf~FN~wG~k~~~~~~~~~~d~~~~~~ia~~~~~~~~~~~~lvlE 160 (369)
T d2ewoa1 81 GSHNIRIIEMTNDDAWIRDCGPTFLVNDKGDLRAVDWEFNAWGGLVDGLYFPWDQDALVARKVCEIEGVDSYKTKDFVLE 160 (369)
T ss_dssp TCCSEEEEECCCSSCCTTTSSCEEEECSSSCEEEEEEECCTTTTTTTCSSSCCTTHHHHHHHHHHTTTCCEEEEEEEECC
T ss_pred CCCCEEEEEECCCCHHHHCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEC
T ss_conf 77777999924797566134645898588988998533367765445545522457799999998736543466354875
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 GG~ie~dG~GtlltT~~cll~~nRNp~~s~~~ie~~L~~~LGv~~viwL~~g~~~DdTdGHID~~arFi~~~tvl~~~~~ 240 (369)
T d2ewoa1 161 GGSIHVDGEGTVLVTEMCLLHPSRNPHLTKEDIEDKLKDYLNCVKVLWVKDGIDPYETNGHIDDVACFIRPGEVACIYTD 240 (369)
T ss_dssp GGGEEEETTTEEEEEHHHHTSTTSCTTSCHHHHHHHHHHHHCCSEEEEECCCSCTTTTSSCSTTTEEEEETTEEEEBCCC
T ss_pred CCCEEECCCCCEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECC
T ss_conf 89789889985896445621667899989999999999985994799844766666667773206997289849997148
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 d~~~~~y~~~~~~~~~L~~~~d~~G~~~~i~~lp~p~~~~~~~~~~~~~~~~~~~~~~~g~~l~aSY~Nfli~N~~VivP 320 (369)
T d2ewoa1 241 DKEHPFYQEAKAAYDFLSQQTDAKGRPLKVHKMCVTKEPCYLQEAATIDYVEGSIPREEGEMAIASYLNFLIVNGGIILP 320 (369)
T ss_dssp CTTSTTHHHHHHHHHHHHTCBCSSSCBCEECCBCBCSSCEECCCGGGSCCCCC-------CEECCBTTCCEEETTEEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEE
T ss_conf 87786579999999999987875699753885368975443333455444467664568988654236789999999990
Q ss_pred ------------------------------------------------E
Q ss_conf ------------------------------------------------8
Q 002647 518 ------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------a 518 (897)
.
T Consensus 321 ~yg~~~D~~Al~~l~~~fP~r~Vv~i~~~~l~~~gG~iHCiT~q~Pa~~ 369 (369)
T d2ewoa1 321 QYGDENDQLAKQQVQEMFPDRKVVGVRTEEIAYGGGNIHCITQQQPATL 369 (369)
T ss_dssp CCSCTTHHHHHHHHHHHSTTSEEEEECTHHHHTTSCCTTTTCEEEECCC
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHCCCCCEECCCCCCCCC
T ss_conf 1798678999999998888997999844698864975247164536899
|
| >d2heka1 a.211.1.1 (A:1-369) Hypothetical protein aq_1910 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: HD-domain/PDEase-like superfamily: HD-domain/PDEase-like family: HD domain domain: Hypothetical protein aq 1910 species: Aquifex aeolicus [TaxId: 63363]
Probab=100.00 E-value=0 Score=27801.67 Aligned_cols=1 Identities=0% Similarity=-0.924 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~k~~~D~i~g~i~~~~~~~rii~s~~fqRL~~~~Ql~~~~~v~p~a~htR~~HSLgV~~lar~l~~~l~~~~~~~v~~A 80 (369)
T d2heka1 1 MIKEFSDPLYGFVRVGEAGLRLIDSFPFQRLRYVKQLGLAYLVFPSAQHTRFEHSLGVYHITERICESLKVKEKELVKLA 80 (369)
T ss_dssp CEEEEEETTTEEEEEEHHHHHHHTSHHHHGGGGSBTTTTGGGTSTTCCCBHHHHHHHHHHHHHHHHHHHTCTTHHHHHHH
T ss_pred CCEEEECCCCCCEECCHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf 95377359988886488999982997670345773478552338999566211998999999999999743328899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~LlHDiGh~PFsH~gE~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~d~ 160 (369)
T d2heka1 81 GLLHDLGHPPFSHTTEVLLPRERSHEDFTERVIKETEIYEILKQDYSHEDIERLVRITLGKPEDEEEKLLSEIITGEFGS 160 (369)
T ss_dssp HHTTTTTCCSSSSCHHHHSTTSSSCCCHHHHHHHHSHHHHHHHTTSCHHHHHHHHHHHHTCCSSHHHHHHHHHHHSTTCH
T ss_pred HHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCHH
T ss_conf 99860265022204666620345520468998740179999998521236999999863246675204588775265101
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 Drldyl~rd~~~~~~~~g~~~~~~l~~~~~~~~~~l~~~~~~~~~~e~~~~~R~~m~~~vy~h~~~~~~~~~l~~~~~~~ 240 (369)
T d2heka1 161 DRMDYLRRDAYFCGVSYGFFDYDRLISTLRVYENKVVVDESGLRALENFLISRYFMYVQVYFHKVVRILSIHLVEFLKKL 240 (369)
T ss_dssp HHHHHHHHHHHHHTCCSSCCCCHHHHHTEEEETTEEEEEGGGHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 03433344465506767730199998877653400013563499999999999999899955478899999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~d~~~~~~l~D~~i~~~L~~~~~~~~~~~~i~~R~l~K~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 320 (369)
T d2heka1 241 ISQEDFTDINNFLRLNDAFVISELFKRKAFREDFERIFQRKHFKTLLSTENYEKFSETKERLLEKFPQEKVRFDEVEKEV 320 (369)
T ss_dssp TSSCCCSSTHHHHTCCHHHHHHHHHHCSTTHHHHHHHHSSCCCEEEEEESCHHHHHHHHHHHHHHSCGGGEEEEEEEECS
T ss_pred HHCCCCCCHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 86589788999973369999999985802519999998340252020167788899999999987442144401343445
Q ss_pred ------------------------------------------------E
Q ss_conf ------------------------------------------------8
Q 002647 518 ------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~i~i~~~~~l~~l~~~S~lv~~L~~~~~~riy~~~~v~e~~~~~~~ 369 (369)
T d2heka1 321 YGGNIYVLSSEGLKKAHELSPLIASLKPIKLYRIYVDRQLWEKARSELK 369 (369)
T ss_dssp CCSCCEEEETTEEEEHHHHCHHHHHCCCEEEEEEEECTTTHHHHHHTTC
T ss_pred CCCCEEEECCCCEEEHHHHCHHHHHHHHHHHEEEECCHHHHHHHHHHHC
T ss_conf 6777489639855583563699998688666378889999999998629
|
| >d1ga6a_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Pseudomonas sp., sedolisin [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Serine-carboxyl proteinase, SCP domain: Serine-carboxyl proteinase, SCP species: Pseudomonas sp., sedolisin [TaxId: 306]
Probab=100.00 E-value=0 Score=27800.37 Aligned_cols=1 Identities=0% Similarity=-1.922 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~g~~P~~l~~~y~~~~~~tG~gvtVaIid~G~~~~~~~Dl~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 80 (369)
T d1ga6a_ 1 AGTAKGHNPTEFPTIYDASSAPTAANTTVGIITIGGVSQTLQDLQQFTSANGLASVNTQTIQTGSSNGDYSDDQQGQGEW 80 (369)
T ss_dssp CCBCCCBCGGGHHHHTTCTTSCCEEEEEEEEEEESBCHHHHHHHHHHHHHTTCCCCCEEEEECSCTTSCCCBCHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCEEE
T ss_conf 98887749899999739998889887489999617865678899999986599989977651799888888887721133
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~ld~~~~~gvAp~a~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~Vis~S~g~~~~~~~~~~~~~~~~~a~~~a~~~G 160 (369)
T d1ga6a_ 81 DLDSQSIVGSAGGAVQQLLFYMADQSASGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQG 160 (369)
T ss_dssp HHHHHHHHHHTTSCEEEEEEEEECTTSSTTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 24500001015686499999957999865699999999999758986244244322457886168999999999999789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 i~vv~AaGN~G~~~~~~~~~~~~~~~~~~~pa~~~~v~~vg~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ggg~s~~~ 240 (369)
T d1ga6a_ 161 QTFSVSSGDEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTLYTTSAGAYSNETVWNEGLDSNGKLWATGGGYSVYE 240 (369)
T ss_dssp CEEEEECCSBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEEEECTTSCEEEEEECEEEECTTSCEEECCCEEEEEE
T ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 78998179876557678898766543434665688402333100135777765442021356787755335789866656
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~P~~~~~~~~~~~~r~~pdv~~~~~~~~~~~~~~~~~~~~~~GTS~AaP~vAGvvALi~~a~~~~~G~~n~~ly~~~~~ 320 (369)
T d1ga6a_ 241 SKPSWQSVVSGTPGRRLLPDISFDAAQGTGALIYNYGQLQQIGGTSLASPIFVGLWARLQSANSNSLGFPAASFYSAISS 320 (369)
T ss_dssp ECCGGGGGSTTSCSEEEECSEEEECCGGGCEEEEETTEEEEECSHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCEECCEECCCCCCCCEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
T ss_conf 67543334422578852201102467875048726854666578753113899999999863567668768899998864
Q ss_pred ------------------------------------------------E
Q ss_conf ------------------------------------------------8
Q 002647 518 ------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~di~~g~n~~~~~~~~a~~G~d~~tG~G~~d~~~l~~~~~s~~~ 369 (369)
T d1ga6a_ 321 TPSLVHDVKSGNNGYGGYGYNAGTGWDYPTGWGSLDIAKLSAYIRSNGF 369 (369)
T ss_dssp CGGGEECCCSCBSSSTTCSCBCCSSSBTTTBTCEECHHHHHHHHHHHCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCHHHHHHHHHHCCC
T ss_conf 7665204445888888887678678988956724379999999986699
|
| >d1laxa_ c.94.1.1 (A:) D-maltodextrin-binding protein, MBP {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Periplasmic binding protein-like II superfamily: Periplasmic binding protein-like II family: Phosphate binding protein-like domain: D-maltodextrin-binding protein, MBP species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27798.15 Aligned_cols=1 Identities=0% Similarity=0.537 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
|
T Consensus 1 k~~eg~ltvW~~~~~~~~~~~~~~~~fe~~~gv~V~v~~~~~~~~kl~~~~~~g~~pDv~~~~~~~~~~~~~~g~l~~L~ 80 (369)
T d1laxa_ 1 KIEEGKLVIWINGDKGYNGLAEVGKKFEKDTDPKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEIT 80 (369)
T ss_dssp CCCTTSEEEECCTTSCHHHHHHHHHHHHHHHCCCEEEECCTTHHHHHHHHHTTTCSCSEEEEEGGGHHHHHHTTCBCCCC
T ss_pred CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCCCC
T ss_conf 98630899996798316999999999865219879999688799999999866999869998908899999879967588
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~dG~~ygiP~~~~~~~~~ynkd~~~~~p~Tw~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (369)
T d1laxa_ 81 PDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPL 160 (369)
T ss_dssp CCHHHHTTBCHHHHHHTEETTEECSEEEEEECCEEEEETTTCSSCCSBGGGHHHHHHHHHTTTCEEECCCCSSGGGTHHH
T ss_pred HHHHHHHHHHHHHHHHCEECCEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
T ss_conf 44533455468898653489999897510220135775000112110057899876442037875632577764004899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~f~~G~~a~~~~~~~~~~~~~~~~~ 240 (369)
T d1laxa_ 161 IAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKV 240 (369)
T ss_dssp HHHTTCEEEEECSSCEEEEEEESSSHHHHHHHHHHHHHHHTTSSCTTCCHHHHHHHHHTTSEEEEEECGGGHHHHHHHTC
T ss_pred HHHHCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEEEECCHHHHHHHHCCCC
T ss_conf 98717720002355544454455778999999999998752764444552677765515775687416577540011245
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~p~~~~~~~~~~~~~~~~~i~~~s~~~~~A~~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (369)
T d1laxa_ 241 NYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAAT 320 (369)
T ss_dssp CEEEECCCBBTTBCCCCEEEEEEEEEBTTCSCHHHHHHHHHHTTSSHHHHHHHHHHSCCCEESBHHHHHHHTTSHHHHHH
T ss_pred CCEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHH
T ss_conf 61376314555677655556435664057855899999999864899999999973898865133200444439489999
Q ss_pred ------------------------------------------------E
Q ss_conf ------------------------------------------------8
Q 002647 518 ------------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~G~~s~~eal~~~~~~it 369 (369)
T d1laxa_ 321 MENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALKDAQTRIT 369 (369)
T ss_dssp HHHHHHSEECCCSTTHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHC
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
T ss_conf 9999608007888568999999999999998399999999999998519
|
| >d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin motor Ncd (non-claret disjunctional) species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=100.00 E-value=0 Score=27727.18 Aligned_cols=1 Identities=0% Similarity=-1.390 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~gnIkV~vRvRP~~~~E~~~~~~~~~~~~~~~v~~~~ 80 (368)
T d2ncda_ 1 LRQRTEELLRCNEQQAAELETCKEQLFQSNMERKELHNTVMDLRGNIRVFCRIRPPLESEENRMCCTWTYHDESTVELQS 80 (368)
T ss_dssp CCSSSGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSEEEEEEECCCCGGGTTSCBCEEEEETTTEEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHCCCCCCEEEECCCCEEEECC
T ss_conf 91589999999999999999999999999999999874899756997999990789901027898579957998699706
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~F~FD~vf~~~~~Q~~Vy~~v~plv~~vl~G~n~ti~aYGqtGSGKT~Tm~G~~~~~Giipr~~~~Lf 160 (368)
T d2ncda_ 81 IDAQAKSKMGQQIFSFDQVFHPLSSQSDIFEMVSPLIQSALDGYNICIFAYGQTGSGKTYTMDGVPESVGVIPRTVDLLF 160 (368)
T ss_dssp SCHHHHTTTCCCEEECSEEECTTCCHHHHHTTTHHHHHHHHTTCEEEEEEECSTTSSHHHHHTEETTEECHHHHHHHHHH
T ss_pred CCCCCCCCCCCEEEECCEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHH
T ss_conf 88655677686466778587999986214999998898775036513773115787560671366644344667999876
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~v~vS~~EIyne~i~DLL~~~~~~~~~~~~~d~~~~~~v~g~~~~~v~~~~~~~~~l~~g~~~r~~~ 240 (368)
T d2ncda_ 161 DSIRGYRNLGWEYEIKATFLEIYNEVLYDLLSNEQKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATA 240 (368)
T ss_dssp HHHHHHHTTSCEEEEEEEEEEESSSCEEETTCSSCCCCCEEECTTCTTCEEETTCCCEEECSHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHCCCCCCCEEEEEEEEEECCEEECCCCCCCCCCCCEEECCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCC
T ss_conf 45443202455526899999886560201256421354311302666442334430220477788999999987511244
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~t~~n~~ssrSh~i~~i~v~~~~~~~~~~~~s~l~~VDLAGse~~~~~~~~~E~~~IN~SL~aL~~vi~aL~~~~~~iPy 320 (368)
T d2ncda_ 241 STAGNERSSRSHAVTKLELIGRHAEKQEISVGSINLVDLAGSESPKTSTRMTETKNINRSLSELTNVILALLQKQDHIPY 320 (368)
T ss_dssp SSSCTTTTTTCEEEEEEEEEEECTTSCCEEEEEEEEEECCCCCCC----------CTTHHHHHHHHHHHHHHTTCSCCCG
T ss_pred CCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEEEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 22146545554327899999976698856765444422010233102321024552026499999999998658998997
Q ss_pred -----------------------------------------------E
Q ss_conf -----------------------------------------------8
Q 002647 518 -----------------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------------a 518 (897)
+
T Consensus 321 R~SkLT~lL~dsLggns~t~mI~~isp~~~~~~eTl~TL~fa~rak~~ 368 (368)
T d2ncda_ 321 RNSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAASVNSC 368 (368)
T ss_dssp GGSHHHHHHGGGSSSSCEEEEEEEECCBGGGHHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 578889998985599870999999798735499999999999997569
|
| >d1r8ga_ d.128.1.3 (A:) Carboxylate-amine ligase YbdK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Glutamine synthetase/guanido kinase superfamily: Glutamine synthetase/guanido kinase family: Glutamate-cysteine ligase family 2 (GCS2) domain: Carboxylate-amine ligase YbdK species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27727.12 Aligned_cols=1 Identities=0% Similarity=-0.560 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~f~~~~~~tiGvE~E~~lvd~~~~~~~~~~~~ll~~~~~~~~~~~i~~El~~~qiEl~t~p~~~~~e~~~~l~~~~~~ 80 (368)
T d1r8ga_ 1 LPDFHVSEPFTLGIELEMQVVNPPGYDLSQDSSMLIDAVKNKITAGEVKHDITESMLELATDVCRDINQAAGQFSAMQKV 80 (368)
T ss_dssp CCCCCCCCTTCEEEEEEEEEEETTTTEECSCCHHHHTTTSSSCSSSEEEECSSSSEEEEECCSBSSHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHH
T ss_conf 99999999983489876543679987667757999997222246886310467766998077779999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~g~~P~~~~~~~~~~~~~ry~~~~~~~~~~~~~~~~~g~hv~~~~~d~~~~~~~~~~~~~~~p~l~ 160 (368)
T d1r8ga_ 81 VLQAATDHHLEICGGGTHPFQKWQRQEVCDNERYQRTLENFGYLIQQATVFGQHVHVGCASGDDAIYLLHGLSRFVPHFI 160 (368)
T ss_dssp HHHHHHHTTCEEECCSBCSSCCC----------------CCGGGGCSCCBCEEEEEEECSSHHHHHHHHHHHHTTHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99987655875244575212672215577508999998742707888764256031168999999999999999868998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 aL~anSP~~~G~~tg~~s~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vRp~~~~~~iEiR~~D 240 (368)
T d1r8ga_ 161 ALSAASPYMQGTDTRFASSRPNIFSAFPDNGPMPWVSNWQQFEALFRCLSYTTMIDSIKDLHWDIRPSPHFGTVEVRVMD 240 (368)
T ss_dssp HHHCCBCEETTEECSCSBCGGGGGTTSTTCSSCCCCSSHHHHHHHHHHHTTSSSCSSGGGCCCSEEEETTTTEEEEEEEE
T ss_pred HHHCCCHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCC
T ss_conf 88528663358677886775267750876565430001120799999998556445677056316876466742124789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~p~~~~~~~~aa~~~~l~~~l~~~~~~~~~~~~~~~~~~n~~~aar~Gl~~~l~~~~~~~~~~~~~~~~~Ll~~~~~~l 320 (368)
T d1r8ga_ 241 TPLTLSHAVNMAGLIQATAHWLLTERPFKHQEKDYLLYKFNRFQACRYGLEGVITDPHTGDRRPLTEDTLRLLEKIAPSA 320 (368)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHHHCCCCCCGGGGTTHHHHHHHHHHHGGGSEEECTTTCCEEEHHHHHHHHHHHSHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHH
T ss_conf 99988999997568887888998617877640448999999998876144411000689967689999999999999999
Q ss_pred -----------------------------------------------E
Q ss_conf -----------------------------------------------8
Q 002647 518 -----------------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------------a 518 (897)
|
T Consensus 321 ~~lg~~~~l~~l~~~v~~g~t~A~~lr~~~~~~gsl~~~v~~~~e~~~ 368 (368)
T d1r8ga_ 321 HKIGASSAIEALHRQVVSGLNEAQLMRDFVADGGSLIGLVKKHCEIWA 368 (368)
T ss_dssp HHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHTTCCHHHHHHHHHHHHC
T ss_pred HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHC
T ss_conf 978898999999999982999999999999818999999999998739
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=100.00 E-value=0 Score=27725.66 Aligned_cols=1 Identities=0% Similarity=0.304 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~g~a~~~~a~~~~~g~~~~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~~~~~~~~~~~~~~~~~a~spDg~~i~ 80 (368)
T d1mdah_ 1 EKSKVAGSAAAASAAAASDGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLSLAVAGHSGSDFA 80 (368)
T ss_dssp CCCCCCSHHHHHHHTTCCCCCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTCEEEECTTSSCEE
T ss_pred CCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCCCCEECCCCCEEE
T ss_conf 94121200000123445679866645589876126972045788621799708998377888578777513989998899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~ 160 (368)
T d1mdah_ 81 LASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQ 160 (368)
T ss_dssp EEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEE
T ss_pred EECCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCEECCCCCCCCEEECCCCCEEEEEECCCCEEEEEECCCCCEEE
T ss_conf 97556764010356786999989999383064378542102468864058878998999996899859999899893867
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~ 240 (368)
T d1mdah_ 161 LTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPA 240 (368)
T ss_dssp EEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBSSCCEEEECCS
T ss_pred EEECCCCCEECCCCCCEEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCEEECCCCCCCEEEEECCCCEEEEEECC
T ss_conf 86046752374699823999948998899982689626665303111356664660101558689993489779996069
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~a 320 (368)
T d1mdah_ 241 AGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAII 320 (368)
T ss_dssp SCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEE
T ss_pred CCEEEEEECCCCCCEEEEEEECCCCCEEEEECCCCCEEEEEECCCCCEEECCCCEEEEEECCCCCEEEEECCCCCEEEEE
T ss_conf 93699760246543045540127883568871799879998358973340588649999899994868955899651799
Q ss_pred -----------------------------------------------E
Q ss_conf -----------------------------------------------8
Q 002647 518 -----------------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------------a 518 (897)
+
T Consensus 321 ~spDG~~~ly~s~~~~~~v~v~D~~tgk~~~~i~~g~~P~~l~~~~~a 368 (368)
T d1mdah_ 321 AAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGPESLSVQNEA 368 (368)
T ss_dssp ECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSCCCEEECCCCC
T ss_pred ECCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCEEEEECCC
T ss_conf 998999899999489996999989999799998799998789973489
|
| >d2cu0a1 c.1.5.1 (A:3-96,A:207-480) Inosine monophosphate dehydrogenase (IMPDH) {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Inosine monophosphate dehydrogenase (IMPDH) family: Inosine monophosphate dehydrogenase (IMPDH) domain: Inosine monophosphate dehydrogenase (IMPDH) species: Pyrococcus horikoshii [TaxId: 53953]
Probab=100.00 E-value=0 Score=27725.26 Aligned_cols=1 Identities=0% Similarity=1.035 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~~~~~~~~k~ltfdDVlLvP~~sti~srdVdls~~~~~~~~l~iPIiss~MDtV~~~~mA~~la~~Gglgvlhr~~~~ 80 (368)
T d2cu0a1 1 KFVEKLEKAIKGYTFDDVLLIPQATEVEPKDVDVSTRITPNVKLNIPILSAAMDTVTEWEMAVAMAREGGLGVIHRNMGI 80 (368)
T ss_dssp CHHHHHHTCCCCCCGGGEEECCCCCSSCSTTCBCCEEEETTEEESSSEEECCCTTTCSHHHHHHHHHTTCEEEECSSSCH
T ss_pred CHHHHHHHHHHCCCCCCEEEECCCCCCCHHHCEEEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHCCCEEEECCCCCH
T ss_conf 96788998876288000898589776766563653796188314889895798776888999999978996575064898
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 e~~~~~v~~v~~~e~~~~~~~d~~~~~~v~~~~~~~~~~r~~~l~~aGvd~ivID~A~Gh~~~~i~~lK~ir~~~~~~vI 160 (368)
T d2cu0a1 81 EEQVEQVKRVKRAEKYKNAVRDENGELLVAAAVSPFDIKRAIELDKAGVDVIVVDTAHAHNLKAIKSMKEMRQKVDADFI 160 (368)
T ss_dssp HHHHHHHHHHHTCCCCTTCCBCTTSCBCCEEEECTTCHHHHHHHHHTTCSEEEEECSCCCCHHHHHHHHHHHHTCCSEEE
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEE
T ss_conf 99999887433444324101366763799932572778999999983998798437542012456666554121043132
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 aGNVaT~e~~~~l~gaD~VkVGIG~Gs~CTTr~~tGvG~Pq~sAi~e~~~~~~~~~~~iiADGGi~~~Gdi~KAla~GAd 240 (368)
T d2cu0a1 161 VGNIANPKAVDDLTFADAVKVGIGPGSICTTRIVAGVGVPQITAVAMVADRAQEYGLYVIADGGIRYSGDIVKAIAAGAD 240 (368)
T ss_dssp EEEECCHHHHTTCTTSSEEEECSSCSTTBCHHHHTCCCCCHHHHHHHHHHHHHHHTCEEEEESCCCSHHHHHHHHHTTCS
T ss_pred ECCCCCHHHHHHHHCCCCEEECCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHEEEEECCC
T ss_conf 21136799997652276214445675555332112423434789999999875249706845887867721135664132
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~VMlG~~lAg~~Espg~~~~~~g~~~k~~~Gm~S~~a~~~~~~~~~~~~~~~~~~~~~~EG~~~~v~~~G~~~~~l~~l~ 320 (368)
T d2cu0a1 241 AVMLGNLLAGTKEAPGKEVIINGRKYKQYRGMGSLGAMMKGGAERYYQGGYMKTRKFVPEGVEGVVPYRGTVSEVLYQLV 320 (368)
T ss_dssp EEEESTTTTTBTTCCSCEEEETTEEEEEEECTTSHHHHTC----------CCCCSCSSCCBCEEEEECCBCHHHHHHHHH
T ss_pred EEECCCHHCCCCCCCCCEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHH
T ss_conf 35305311142235773671599270135676642211357752223555333444378832885078888899999999
Q ss_pred -----------------------------------------------E
Q ss_conf -----------------------------------------------8
Q 002647 518 -----------------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------------a 518 (897)
-
T Consensus 321 gglrs~m~y~G~~~l~e~~~~~~f~~vt~a~~~E~~~h~~~~~~~~~~ 368 (368)
T d2cu0a1 321 GGLKAGMGYVGARNIRELKEKGEFVIITHAGIKESHPHDIIITNEAPN 368 (368)
T ss_dssp HHHHHHHHHTTCSBHHHHHHHCCEEECCHHHHHHHSCCSSCCSCCCCC
T ss_pred HHHHHHHHHCCCCCHHHHHHCCEEEEECCCCCCCCCCCCEEEECCCCC
T ss_conf 999999876286509998509789999954142467877366356899
|
| >d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Glutamine aminotransferase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=27722.62 Aligned_cols=1 Identities=0% Similarity=-1.655 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~la~~~~~I~ls~g~p~~~~p~~i~~al~~~l~~~~~Y~~~~G~~elr~aiA~~~~~~~~~ 80 (368)
T d1v2da_ 1 MRLHPRTEAAKESIFPRMSGLAQRLGAVNLGQGFPSNPPPPFLLEAVRRALGRQDQYAPPAGLPALREALAEEFAVEPES 80 (368)
T ss_dssp CCCCGGGGGC---CHHHHHHHHHHHTCEECCCCSCSSCCCHHHHHHHHHHTTTSCSCCCTTCCHHHHHHHHHHHTSCGGG
T ss_pred CCCCHHHHHCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCC
T ss_conf 97782345467879999999864399889459889998899999999998602568899867899999997525557741
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 Iiit~G~~~al~~~~~~l~~~~d~v~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~ 160 (368)
T d1v2da_ 81 VVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALTPRTRALLLNT 160 (368)
T ss_dssp EEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCCTTEEEEEEES
T ss_pred EEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHHHHHHHCCCCEEEEECC
T ss_conf 26515307888777650444456532358850134567875177320001354345444788999975335765999769
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 p~NPtG~~~~~~~l~~l~~~a~~~~i~ii~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sk~~~~~G~R~g~~~~~~~~ 240 (368)
T d1v2da_ 161 PMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKEF 240 (368)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEEECCTTT
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCEEEECHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98866666999999999999998498265223333220333333222223344503641455323454322211144223
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~p~g~~~~~~~l~~~~~~ 320 (368)
T d1v2da_ 241 MPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAMGLRVYVPEGTYFLMAELPGWDAF 320 (368)
T ss_dssp HHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTCCEECCSBSSEEEEECTTCCHH
T ss_pred CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEEECCCCHHH
T ss_conf 32002221012332233333222222333221025788999999865322456876694786688306999968950899
Q ss_pred -----------------------------------------------E
Q ss_conf -----------------------------------------------8
Q 002647 518 -----------------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------------a 518 (897)
.
T Consensus 321 ~ll~~~gI~v~pg~~F~~~~~~~~~iRis~~~~~e~i~~ai~rL~~~l 368 (368)
T d1v2da_ 321 RLVEEARVALIPASAFYLEDPPKDLFRFAFCKTEEELHLALERLGRVV 368 (368)
T ss_dssp HHHHHTCEECEEGGGGCSSSCCTTEEEEECCSCHHHHHHHHHHHHHHC
T ss_pred HHHHHCCEEEEECHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHC
T ss_conf 999969999996233078999899899996499999999999999869
|
| >d1pyya4 e.3.1.1 (A:264-631) Penicillin-binding protein 2x (pbp-2x), transpeptidase domain {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: Penicillin-binding protein 2x (pbp-2x), transpeptidase domain species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=0 Score=27722.75 Aligned_cols=1 Identities=0% Similarity=0.072 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 Tid~~lQ~~~e~~l~~~~~~~~~~~~~~vv~d~~TG~IlAmas~P~~dpn~~~~~~~~~~~~n~a~~~~~~PGStfKp~~ 80 (368)
T d1pyya4 1 TISSPLQSFMETQMDAFQEKVKGKYMTATLVSAKTGEILATTQRPTFDADTKEGITEDFVWRDILYQSNYEPGSAFKVMM 80 (368)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHCCSEEEEEEEETTTTEEEEEEEESCCCTTTCTTCCTTCCCCCHHHHCCBCCGGGGHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHH
T ss_conf 93979999999999999997089569999999999939999967988854236766103443265517668863054699
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~aaaLe~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vtl~~al~~S~N~~~~~l~~~lg~~~~~~~~~~~G~~~ 160 (368)
T d1pyya4 81 LAAAIDNNTFPGGEVFNSSELKIADATIRDWDVNEGLTGGRMMTFSQGFAHSSNVGMTLLEQKMGDATWLDYLNRFKFGV 160 (368)
T ss_dssp HHHHHHTTCCCTTCEEECCCEEETTEEECCEETTTEECCSCEEEHHHHHHTTCHHHHHHHHHHHCHHHHHHHHHHTTTTS
T ss_pred HHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCC
T ss_conf 99864023332222222101102444432345544334880456999997532454143210358244789998753487
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~e~~g~~p~~~~~~~~~~~~G~~~~~tplq~a~aya~iANgG~~~~P~~i~~i~d~~g~~~~~~~~~~~~~~i 240 (368)
T d1pyya4 161 PTRFGLTDEYAGQLPADNIVNIAQSSFGQGISVTQTQMIRAFTAIANDGVMLEPKFISAIYDPNDQTARKSQKEIVGNPV 240 (368)
T ss_dssp CCCCSCSSCCCCBCCCSSHHHHHHGGGTCSCBBCHHHHHHHHHHHHTTTCEECCBCEEEEEEGGGTEEEECCCCEEECCS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEECCCCCCCCCCCC
T ss_conf 42245433233467643320000222346655107888867789854876205579888866876410134432344443
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~m~~~v~~~~~~~~~~~gtg~~~~~~~g~~vaGKTGTaq~~~~~~~~~~~~~~~~~~~fvg~~P~~~P~~ 320 (368)
T d1pyya4 241 SKDAASLTRTNMVLVGTDPVYGTMYNHSTGKPTVTVPGQNVALKSGTAQIADEKNGGYLVGLTDYIFSAVSMSPAENPDF 320 (368)
T ss_dssp CHHHHHHHHHHHHHHHHCTTTCTTEETTTTEESSCCTTSCCEEEEEEEECBCSSSSSBCCSTTCEEEEEEEEESSSSCSE
T ss_pred CHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCE
T ss_conf 27899999999987531145542676046531213799506678822201477788501366565699999957589959
Q ss_pred -----------------------------------------------E
Q ss_conf -----------------------------------------------8
Q 002647 518 -----------------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------------a 518 (897)
+
T Consensus 321 ai~V~v~~p~~~~g~~gg~vAapi~~~i~~~~~~l~~~~~~~~~~~~~ 368 (368)
T d1pyya4 321 ILYVTVQQPEHYSGIQLGEFANPILERASAMKDSLNLQTTAKALEQVS 368 (368)
T ss_dssp EEEEEEESCSSCCHHHHHHHHHHHHHHHHHTTGGGCTTSCCSTTTTCC
T ss_pred EEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 999999778867887306899999999999997743589999724489
|
| >d1f52a2 d.128.1.1 (A:101-468) Glutamine synthetase, C-terminal domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Glutamine synthetase/guanido kinase superfamily: Glutamine synthetase/guanido kinase family: Glutamine synthetase catalytic domain domain: Glutamine synthetase, C-terminal domain species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=0 Score=27725.13 Aligned_cols=1 Identities=0% Similarity=-1.190 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~dPR~iLkr~~~~l~~~G~~~~~~~g~E~EF~Lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (368)
T d1f52a2 1 DRDPRSIAKRAEDYLRATGIADTVLFGPEPEFFLFDDIRFGASISGSHVAIDDIEGAWNSSTKYEGGNKGHRPGVKGGYF 80 (368)
T ss_dssp TTCHHHHHHHHHHHHHHHTSCSEEEEEEEEEEEEESEEEEEEETTEEEEEEECTTCGGGGGCCCTTCCCCCCCCTTCCSS
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEEEECEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
T ss_conf 98879999999999997699870378854288999421035576777565577322456887666887787655577615
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~~~E~~~~gq~Ei~~~~~~~l~aAD~~~~~k~~ik~iA~~~Gl~atFmpKP~ 160 (368)
T d1f52a2 81 PVPPVDSAQDIRSEMCLVMEQMGLVVEAHHHEVATAGQNEVATRFNTMTKKADEIQIYKYVVHNVAHRFGKTATFMPKPM 160 (368)
T ss_dssp BCTTSSCCHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHHHHHHHHHHHHHHHHHHHHHTTCEEECCSCSS
T ss_pred EEECCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCC
T ss_conf 53001107889999999888622570564223456784322078786577889999999999999997436334741568
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~GsG~HiH~Sl~~~~~n~~~~~~~~~lS~~~~~fiaGll~~~~~~~al~~PtvNSYkRl~~~~~aP~~~~Wg~~NR~ 240 (368)
T d1f52a2 161 FGDNGSGMHCHMSLAKNGTNLFSGDKYAGLSEQALYYIGGVIKHAKAINALANPTTNSYKRLVPGYEAPVMLAYSARNRS 240 (368)
T ss_dssp TTSCCCCEEEEEEEEETTEETTBCSSGGGBCHHHHHHHHHHHHTHHHHHHHHSCSGGGGGTSSSCSSCCCEEEEESSCTT
T ss_pred CCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCEEEECCCCCC
T ss_conf 89877532589874159985656555556489999999999986699899977996077652477768743452367655
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 a~iRi~~~~~~~~~riE~R~~da~aNPYL~lAa~laagl~Gi~~~l~~~~~~~~~~~~~~~~~~~~~~~lP~sl~eAl~a 320 (368)
T d1f52a2 241 ASIRIPVVASPKARRIEVRFPDPAANPYLCFAALLMAGLDGIKNKIHPGEPMDKNLYDLPPEEAKEIPQVAGSLEEALNA 320 (368)
T ss_dssp EEEECCCCSCGGGCCEEECCCCTTSCHHHHHHHHHHHHHHHHHTTCCCCSCCCSCCSSSCCSSTTCCCBCCSSHHHHHHH
T ss_pred CCEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHCHHCCCCCHHHHHHH
T ss_conf 31464025788662478447880177789999999976542421589999777872448976762320151379999999
Q ss_pred -----------------------------------------------E
Q ss_conf -----------------------------------------------8
Q 002647 518 -----------------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------------a 518 (897)
.
T Consensus 321 l~~d~~~~~a~~~lGe~~v~~y~~~K~~E~~~~~~~vt~wE~~~Yl~~ 368 (368)
T d1f52a2 321 LDLDREFLKAGGVFTDEAIDAYIALRREEDDRVRMTPHPVEFELYYSV 368 (368)
T ss_dssp HHHTCHHHHGGGSSCHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHTTC
T ss_pred HHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
T ss_conf 964978788765156999999999999999999679999999741689
|
| >d1qw9a2 c.1.8.3 (A:18-384) Alpha-L-arabinofuranosidase, catalytic domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Alpha-L-arabinofuranosidase, catalytic domain species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=0 Score=27645.03 Aligned_cols=1 Identities=0% Similarity=-0.194 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~i~~~i~g~f~E~lg~~i~~g~~~~~~~~~~~~G~R~dv~~~l~~l~~~~lR~PGG~~~~~y~W~~~iGp~~~Rp~~~~~ 80 (367)
T d1qw9a2 1 EIDKRIYGSFIEHLGRAVYGGIYEPGHPQADENGFRQDVIELVKELQVPIIRYPGGNFVSGYNWEDGVGPKEQRPRRLDL 80 (367)
T ss_dssp ECCGGGGEEECCSSTTSTBTTTBCTTCTTBCTTSBBHHHHHHHHHHTCCEEEESCSGGGGGCCGGGGSSCGGGCCCEEET
T ss_pred CCCHHHCCCHHHHCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHCCCCCCC
T ss_conf 98824424406543573207664799998887665999999999639987865886136705212365986778886588
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~w~~~~~~~~G~~Ef~~~~~~~gaep~~~vn~g~~~~~~a~d~vey~n~~~~t~~~~~R~~~G~~~P~~v~yweIGNE~~ 160 (367)
T d1qw9a2 81 AWKSVETNEIGLNEFMDWAKMVGAEVNMAVNLGTRGIDAARNLVEYCNHPSGSYYSDLRIAHGYKEPHKIKTWCLGNAMD 160 (367)
T ss_dssp TTTEEECCSSCHHHHHHHHHHHTCEEEEEECCSSCCHHHHHHHHHHHHCCSSSHHHHHHHHTTCCSCCCCCEEEESSCCC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCC
T ss_conf 88876767777899999999809838999837974099999999997068988889999871887888732899635111
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 g~~~~g~~~~~~Y~~~~~~f~~amk~~dP~i~lia~g~~~~~~~~~~~w~~~vl~~~~~~iD~is~H~Y~~~~~~~~~~~ 240 (367)
T d1qw9a2 161 GPWQIGHKTAVEYGRIACEAAKVMKWVDPTIELVVCGSSNRNMPTFAEWEATVLDHTYDHVDYISLHQYYGNRDNDTANY 240 (367)
T ss_dssp STTSTTCCCHHHHHHHHHHHHHHHHHHCTTCEEEECCCSCTTSTTTTHHHHHHHHHHGGGCSEEEEEEEECCTTCCHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 56555788999999999999998760299836999868877776555289999861311577022347778875512455
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~iavdEwn~wy~~~~~~~~~~~~~~~~~~l~~~~tl~~AL~~A~~L~~~ 320 (367)
T d1qw9a2 241 LALSLEMDDFIRSVVAIADYVKAKKRSKKTIHLSFDEWNVWYHSNEADKLIEPWTVAPPLLEDIYNFEDALLVGCMLITL 320 (367)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHTCSCCCEEEEEEEEECCTTHHHHTTCCTTBSSCCTTCCCCBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 55677799999999999999874046778851886224564454555555554233755312237699999999999999
Q ss_pred ----------------------------------------------E
Q ss_conf ----------------------------------------------8
Q 002647 518 ----------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------a 518 (897)
-
T Consensus 321 ~R~sD~V~mA~~A~lvNvl~~i~~~~~~~~~~~~~y~v~~~~s~~~r 367 (367)
T d1qw9a2 321 MKHADRVKIACLAQLVNVIAPIMTEKNGPAWKQTIYYPFMHASVYGR 367 (367)
T ss_dssp HHTTTTEEEEEEECSBSSSCSEEECTTSCEEECTTHHHHHHHHHHCC
T ss_pred HHCCCEEEEEEHHHHHHHHCCEEECCCCCEEECCCHHHHHHHHHHCC
T ss_conf 97259556540337664102148659998610751199999998529
|
| >d1ursa_ c.94.1.1 (A:) D-maltodextrin-binding protein, MBP {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Periplasmic binding protein-like II superfamily: Periplasmic binding protein-like II family: Phosphate binding protein-like domain: D-maltodextrin-binding protein, MBP species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=100.00 E-value=0 Score=27646.63 Aligned_cols=1 Identities=100% Similarity=2.696 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 qTIt~w~~~~~~~~~~~~~~~~~F~~~~p~~~v~~~~~~~~~~~~~l~~~~~ag~~pDi~~~~~~~~~~~~~~~g~l~~L 80 (367)
T d1ursa_ 1 QTITVWSWQTGPELQDVKQIAAQWAKAHGDKVIVVDQSSNPKGFQFYATAARTGKGPDVVFGMPHDNNGVFAEEGLMAPV 80 (367)
T ss_dssp CEEEEEESCCHHHHHHHHHHHHHHHHHHCCEEEEEECTTCTTCTTHHHHHHHTTCCCSEEEEEEGGGHHHHHHTTCBCCC
T ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCCCC
T ss_conf 97999827884579999999999999879989999848828999999999966999839998582789999987995400
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~dG~~y~iP~~~~~~~l~yNk~~~~~~p~T~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (367)
T d1ursa_ 81 PSGVLNTGLYAPNTIDAIKVNGTMYSVPVSVQVAAIYYNKKLVPQPPQTWAEFVKDANAHGFMYDQANLYFDYAIIGGYG 160 (367)
T ss_dssp CTTSCCGGGSCHHHHHTTEETTEECSEEEEEEECEEEEETTTCSSCCCSHHHHHHHHHHHCEECCTTCHHHHHHHHHHTT
T ss_pred HHHHHHHCCCCHHHHHHCEECCEEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
T ss_conf 24554411479778854638877876420354158887401023431008999999866303667777521068887541
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~f~~G~~a~~~~g~~~~~~~~~~~~~~~~ 240 (367)
T d1ursa_ 161 GYVFKDNNGTLDPNNIGLDTPGAVQAYTLMRDMVSKYHWMTPSTNGSIAKAEFLAGKIGMYVSGPWDTADIEKAKIDFGV 240 (367)
T ss_dssp CEEEEEETTEEEEEEEESSSHHHHHHHHHHHHHHHTSCSCCTTCCHHHHHHHHHTTCCSEEEECGGGHHHHHHTTCCEEE
T ss_pred HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEE
T ss_conf 02211588644543135588889999999999986136564222037788888527741103366665444441156326
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~P~~~~g~~~~~~~~~~~~~i~~~s~~~e~A~~fl~~l~s~e~q~~~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~~~ 320 (367)
T d1ursa_ 241 TPWPTLPNGKHATPFLGVITAFVNKESKTQAADWSLVQALTSAQAQQMYFRDSQQIPALLSVQRSSAVQSSPTFKAFVEQ 320 (367)
T ss_dssp ECCCCCTTSCCCCCEEEEEEEEEBTTCSCHHHHHHHHHHHTSHHHHHHHHHHHCCEESSHHHHTSHHHHTCHHHHHHHHH
T ss_pred EECCCCCCCCCCCEECCCCCCEECCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHCHHHHHCHHHHHHHHH
T ss_conf 63365788664310005654010210131688999999850699999999971988873767739553209389999999
Q ss_pred ----------------------------------------------E
Q ss_conf ----------------------------------------------8
Q 002647 518 ----------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------a 518 (897)
|
T Consensus 321 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~~t~~~al~~~~~~i~kg 367 (367)
T d1ursa_ 321 LRYAVPMPNIPQMQAVWQAMSILQNIIAGKVSPEQGAKDFVQNIQKG 367 (367)
T ss_dssp GGGCEECCCSTHHHHHHHHTTHHHHHHHTSSCHHHHHHHHHHHHHC-
T ss_pred HHHCEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
T ss_conf 95083178785489999999999999829899999999999998576
|
| >d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Streptomyces sp. [TaxId: 1931]
Probab=100.00 E-value=0 Score=27645.80 Aligned_cols=1 Identities=0% Similarity=-0.692 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~v~VIVVGsG~aG~v~A~rLaeaG~~VlvLEaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (367)
T d1n4wa1 1 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWNQPGPDGNIFCGMLNPDKRSSWFKNRTEAPLGSFLWLDVVNRN 80 (367)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCCCCCTTSSSSCCTTSCCGGGSBSCSBCCCCTTCHHHHGGGCCB
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 95709996769899999999977959199991689988766565422222344544333334433543321235677766
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~g~~~~~~~~~~~~~~g~~lGG~S~i~~~~~~r~~~~~f~~~~~~~~~~~~l~pyy~~ae~~l~~~~~~~~~~~~~ 160 (367)
T d1n4wa1 81 IDPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRSYFEEILPRVDSSEMYDRYFPRANSMLRVNHIDTKWFEDT 160 (367)
T ss_dssp CCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHCTTSCHHHHHHTHHHHHHHHHTCBCCCHHHHHHC
T ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCCCCEECCEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 66566740223688652135776378873224360006866742232245738899999999998829877888866667
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~k~s~~~~yl~~a~~~gn~~i~~~t 240 (367)
T d1n4wa1 161 EWYKFARVSREQAGKAGLGTVFVPNVYDFGYMQREAAGEVPKSALATEVIYGNNHGKQSLDKTYLAAALGTGKVTIQTLH 240 (367)
T ss_dssp GGGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTSSCCSGGGTCSTTCCSSSBCCTTTTHHHHHHHTTSEEEEESE
T ss_pred CCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCC
T ss_conf 78728899999998738642235323224875555655567631246433445654467667623789758980998787
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~V~~I~~~~~g~~~v~v~~~~~~~~~~~~~~i~Ak~VVLaAGai~Tp~LLl~S~~~g~l~~~s~~lG~~~~~~l~~~~~~ 320 (367)
T d1n4wa1 241 QVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTELLVRARDTGTLPNLNSEVGAGWGCVLGKATDD 320 (367)
T ss_dssp EEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHHHHHHHHHTTSSTTCCTTTTCCBSSCTTTTBCT
T ss_pred EEEEEEECCCCCEEEEEEEECCCCCCEEEEEEECCEEEEECCHHCCHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCC
T ss_conf 89998985899889999997777752049998648999906523079999847777999986676667865545644456
Q ss_pred ----------------------------------------------E
Q ss_conf ----------------------------------------------8
Q 002647 518 ----------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------a 518 (897)
.
T Consensus 321 ~g~~~~~~~~~~~~g~~i~~~~~~~p~~t~~ala~~~~~~~~~~~~~ 367 (367)
T d1n4wa1 321 YGRVAGYKNLYVTDGSLIPGSVGVNPFVTITALAERNVERIIKQDVT 367 (367)
T ss_dssp TSBBTTCSSEEECSGGGSCSCCSSCSHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 66435877730347743568687893340799998799999885459
|
| >d1o7xa_ a.103.1.1 (A:) Citrate synthase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Citrate synthase superfamily: Citrate synthase family: Citrate synthase domain: Citrate synthase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=100.00 E-value=0 Score=27649.57 Aligned_cols=1 Identities=0% Similarity=-0.991 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~GL~gv~~~eT~IS~id~~~G~L~YRG~~i~dLa~~~sFEEva~LL~~G~LPt~~el~~f~~~L~~~~~lp~~v~~~ 80 (367)
T d1o7xa_ 1 VVSKGLENVIIKVTNLTFIDGEKGILRYRGYNIEDLVNYGSYEETIYLMLYGKLPTKKELNDLKAKLNEEYEVPQEVLDT 80 (367)
T ss_dssp CBCGGGTTCEEEEESSEEEETTTTEEEETTEEHHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHTCCCCCHHHHHH
T ss_pred CCCCCCCCCEEEEEECEEEECCCCEEEECCEEHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 97977799837588680386898879998874999861599999999997798969999999999999863581999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 i~~~p~~~hpm~~l~~~vsal~~~d~~~~~~~~~~~~a~~l~A~~p~i~a~~~r~~~g~~~~~p~~~~s~~~~~~~~~~~ 160 (367)
T d1o7xa_ 81 IYLMPKEADAIGLLEVGTAALASIDKNFKWKENDKEKAISIIAKMATLVANVYRRKEGNKPRIPEPSDSFAKSFLLASFA 160 (367)
T ss_dssp HHHSCTTSCHHHHHHHHHHHHHHHCCCCCSSSSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCSCHHHHHHHHHHS
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 98601230146788888998765300234321110167789989999999999876489877885034468887654048
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~l~~~lvl~adHg~n~Stfa~r~~aSt~~d~~~~~~aa~~~l~Gplhgga~~~~~~~l~~~~~~~~~~~~~ 240 (367)
T d1o7xa_ 161 REPTTDEINAMDKALILYTDHEVPASTTAALVAASTLSDMYSSLTAALAALKGPLHGGAAEEAFKQFIEIGDPNRVQNWF 240 (367)
T ss_dssp SCCCHHHHHHHHHHHHHHSCCSCCHHHHHHHHHHHTTCCHHHHHHHHHHHHTSTTTTTHHHHHHHHHHHHCSGGGHHHHH
T ss_pred CCCCHHHHHHHHHHHEEECCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHH
T ss_conf 88506777776567400015788854300001451376422114667776045434673799999999633654237899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~i~GfGH~vy~~~DPR~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~pNvd~~~~~l~~~ 320 (367)
T d1o7xa_ 241 NDKVVNQKNRLMGFGHRVYKTYDPRAKIFKKLALTLIERNADARRYFEIAQKLEELGIKQFSSKGIYPNTDFYSGIVFYA 320 (367)
T ss_dssp HHHTTTTCCCCTTBCCSSCSSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTTTCCBCTTTTHHHHHHH
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
T ss_conf 99986147754167875343566228999999999865046512699999999999998534589986838999999998
Q ss_pred ----------------------------------------------E
Q ss_conf ----------------------------------------------8
Q 002647 518 ----------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------a 518 (897)
-
T Consensus 321 lG~p~~~~~~lf~~~R~~G~~AH~~Eq~~~~~~l~RP~~~Y~Gp~~~ 367 (367)
T d1o7xa_ 321 LGFPVYMFTALFALSRTLGWLAHIIEYVEEQHRLIRPRALYVGPEYQ 367 (367)
T ss_dssp HTCCGGGHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCEEEECSCSCC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCC
T ss_conf 09786778899999999999999999985789841866510098999
|
| >d1d3ga_ c.1.4.1 (A:) Dihydroorotate dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: FMN-linked oxidoreductases family: FMN-linked oxidoreductases domain: Dihydroorotate dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27649.50 Aligned_cols=1 Identities=0% Similarity=-0.891 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~~~l~~~~~~e~ah~~~~~~~~~~~~~~~~~~~~~~L~v~~~Gl~~~nPi~lAsG~~~~~~~i~~~~ 80 (367)
T d1d3ga_ 1 MATGDERFYAEHLMPTLQGLLDPESAHRLAVRFTSLGLLPRARFQDSDMLEVRVLGHKFRNPVGIAAGFDKHGEAVDGLY 80 (367)
T ss_dssp CCSCCHHHHHHTHHHHHHHHSCHHHHHHHHHHHHHTTCCC---CCCCGGGCEEETTEEESSSEEECTTSSTTSSSHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCEECCCCCEECCCCCCCHHHHHHHH
T ss_conf 97770899999999999865898999999999998337553236898777568899866998676848787899999986
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~G~G~vv~kTit~~~~~gn~~pr~~~~~~~~~~~n~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~pv~vsi~~~~~~~ 160 (367)
T d1d3ga_ 81 KMGFGFVEIGSVTPKPQEGNPRPRVFRLPEDQAVINRYGFNSHGLSVVEHRLRARQQKQAKLTEDGLPLGVNLGKNKTSV 160 (367)
T ss_dssp HHTCSEEEEEEECSSCBCCSCSCCEEEEGGGTEEEECCCCCBCCHHHHHHHHHTTHHHHHHHHHTTCCEEEEECCCTTCS
T ss_pred HCCCCEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCH
T ss_conf 35874786134246632457760322102111211224767754699998888875411343436863899834654507
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~ad~lelNiScPn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pv~vKlsP~~~~~~i~~~a 240 (367)
T d1d3ga_ 161 DAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIA 240 (367)
T ss_dssp CHHHHHHHHHHHHGGGCSEEEEESCCTTSTTC----CHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 88888877777765314400245000321122210111101257888887653202245776301247641000134467
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~g~~gi~~~nt~~~~~~~~~~~~~~~~gg~sG~~~~~i~l~~v~~v~~~~~~~ipIig~GGI~s~~Da~e~i~aG 320 (367)
T d1d3ga_ 241 SVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAG 320 (367)
T ss_dssp HHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHHT
T ss_pred HHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCC
T ss_conf 88876543102113332234454344211244321121110230889999999738995199988979999999999839
Q ss_pred ----------------------------------------------E
Q ss_conf ----------------------------------------------8
Q 002647 518 ----------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------a 518 (897)
-
T Consensus 321 As~VQi~Ta~~~~Gp~ii~~I~~~L~~~l~~~G~~si~dl~G~a~~~ 367 (367)
T d1d3ga_ 321 ASLVQLYTALTFWGPPVVGKVKRELEALLKEQGFGGVTDAIGADHRR 367 (367)
T ss_dssp CSEEEESHHHHHHCTHHHHHHHHHHHHHHHHTTCSSHHHHTTGGGGC
T ss_pred CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCHHCCC
T ss_conf 97887417788239079999999999999984999899962802269
|
| >d1b65a_ d.154.1.1 (A:) L-aminopeptidase D-Ala-esterase/amidase DmpA {Ochrobactrum anthropi [TaxId: 529]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: DmpA/ArgJ-like superfamily: DmpA/ArgJ-like family: DmpA-like domain: L-aminopeptidase D-Ala-esterase/amidase DmpA species: Ochrobactrum anthropi [TaxId: 529]
Probab=100.00 E-value=0 Score=27649.15 Aligned_cols=1 Identities=0% Similarity=1.068 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 r~r~R~lGi~~~~~pGp~N~ITDV~GV~VGH~T~~~g~~~~~~~~~~~TGvTvIlp~~g~~~~~~v~ag~~~~~g~~~~~ 80 (367)
T d1b65a_ 1 KPRARDLGLPFTGVTGPYNAITDVDGVGVGFQTIIENEPRPGRKRPARSGVTAILPHMQSETPVPVYAGVHRFNGNGEMT 80 (367)
T ss_dssp CCCGGGGTCCCCSCBCTTSSGGGSTTCEEEEEEEECSSCCTTCSSCCEEEEEEEETTTTCSSCCCEEEEEEEEEESSCBC
T ss_pred CCCHHHCCCCCCCCCCCCCCEECCCCCEECCEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCC
T ss_conf 97567539887888799875014798566223644687654679986711799971899756786055561368876678
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~v~e~g~~~~aIvLTggsa~Glaa~~~v~~~l~~~~~g~~~~~~~~vvPiV~~~~D~~l~d~~~~~~~~~~~~~A~~ 160 (367)
T d1b65a_ 81 GTHWIEDGGYFLGPVVITNTHGIGMAHHATVRWMVDRYASTYQTDDFLWIMPVVAETYDGALNDINGFPVTEADVRKALD 160 (367)
T ss_dssp SHHHHHHHCEECSCEEEEEGGGHHHHHHHHHHHHHHHTHHHHSSSSCCCCCCEEEEECCTTTSCGGGCCCCHHHHHHHHH
T ss_pred CHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCEEEEEECCCCCCCCCCCCHHHHHHHHH
T ss_conf 05653547753677987567248888789999999856888777885210451279980677876678988999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~A~~~~v~~G~VGAGtGa~~~~~KGGiGtASr~~~~~~~~~tVGaLV~~N~g~~~~~~~~g~p~g~~l~~~~~~~~~~~~ 240 (367)
T d1b65a_ 161 NVASGPVQEGNCGGGTGMITYGFKGGTGTASRVVEFGGRSFTIGALVQANHGQRDWLTIAGVPVGQHMRDGTPQSQLQER 240 (367)
T ss_dssp TCBSSCCCCBSCGGGTTCEETTEECEEEEEEEEEEETTEEEEEEEEEEECCCCGGGCCBTTBCHHHHCCTTCHHHHC---
T ss_pred HHHCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC
T ss_conf 75228877887573211321356787521267887178835999999744788500240775200131445777777889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 nTtI~VVATDApL~~~ql~RlA~~A~~GlARai~p~ht~dGD~vfA~STg~~~~~~~~~~~~~~~~~l~~~~l~~lf~Aa 320 (367)
T d1b65a_ 241 GSIIVVLATDLPLMPHQLKRLARRASIGIGRNGTPGGNNSGDIFIAFSTANQRPMQHRSAPFLDVEMVNDEPLDTVYLAA 320 (367)
T ss_dssp -CEEEEEEECSCCCHHHHHHHHHTHHHHHHTTTCCCCTTCEEEEEEEECCSCCCCGGGSCSEEEEEEECSGGGHHHHHHH
T ss_pred CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHCHHHHHH
T ss_conf 98899999598189999999999865315312677779984779994057867766556554441004720008899999
Q ss_pred ----------------------------------------------E
Q ss_conf ----------------------------------------------8
Q 002647 518 ----------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------a 518 (897)
+
T Consensus 321 aea~eeAI~nal~~A~t~~G~~~~~~~~~alp~d~~~~~~~~~~~l~ 367 (367)
T d1b65a_ 321 VDSVEEAVVNAMIAAEDMGGTPFDRLLVQAIDHERLRAVLRQYGRLA 367 (367)
T ss_dssp HHHHHHHHHHHHHHCCCEECSTTCSCEECCCCHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHHHHHHHCCCC
T ss_conf 99999999999974677657589987741799999999999846679
|
| >d1iuqa_ c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransferase {Cushaw squash (Cucurbita moschata) [TaxId: 3662]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Glycerol-3-phosphate (1)-acyltransferase superfamily: Glycerol-3-phosphate (1)-acyltransferase family: Glycerol-3-phosphate (1)-acyltransferase domain: Glycerol-3-phosphate (1)-acyltransferase species: Cushaw squash (Cucurbita moschata) [TaxId: 3662]
Probab=100.00 E-value=0 Score=27647.68 Aligned_cols=1 Identities=0% Similarity=-1.524 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~i~~~~e~~~lp~~~~~~~~~~~~~y~~a~~~s~~~~a~e~~~~~~~~~~~~~~~~~~~p~~ 80 (367)
T d1iuqa_ 1 ASHSRKFLDVRSEEELLSCIKKETEAGKLPPNVAAGMEELYQNYRNAVIESGNPKADEIVLSNMTVALDRILLDVEDPFV 80 (367)
T ss_dssp CCCCCGGGGCCSHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 98641322266589999999999855789857999999999999999973489995089999999999888741478743
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 f~~~h~~~~~~~~~~~~~~~~~~~li~~~~s~v~~~~~l~~~~Ekl~~g~nVIlvSNHqS~~D~~il~~ll~~~~~~l~r 160 (367)
T d1iuqa_ 81 FSSHHKAIREPFDYYIFGQNYIRPLIDFGNSFVGNLSLFKDIEEKLQQGHNVVLISNHQTEADPAIISLLLEKTNPYIAE 160 (367)
T ss_dssp CCSEECCCCSSSCHHHHHHHHHGGGBCGGGCEEECHHHHHHHHHHHHTTCEEEEEECCCCTTHHHHHHHHHTTTCHHHHH
T ss_pred CCCCCHHCCCCCCHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCC
T ss_conf 67521000578778999999999986478777815789999999860799779987885400389999998512656210
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~i~f~Ak~~l~~~Pl~~~f~~~~g~I~V~rk~~i~~~p~l~~~~~~~~~~al~~~~~lL~~Gg~~v~IfPEGTRsr~~~~ 240 (367)
T d1iuqa_ 161 NTIFVAGDRVLADPLCKPFSIGRNLICVYSKKHMFDIPELTETKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPS 240 (367)
T ss_dssp HCEEEECTHHHHCTTTHHHHHTSEEEECCCGGGTTSSGGGHHHHHHHHHHHHHHHHHHHHHCCCEEEECTTCSCCCBCTT
T ss_pred CEEEEEEHHHHCCHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC
T ss_conf 33898545562257789999748878995465444563101002233268899999986168759999456764676666
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 dg~l~p~~F~~~~~~~~~~LA~~sgvP~hV~Pvai~~~d~~pP~~~v~~~ige~R~~~~~~V~i~~G~pId~~~~~~~~~ 320 (367)
T d1iuqa_ 241 TGEWYPAPFDASSVDNMRRLIQHSDVPGHLFPLALLCHDIMPPPSQVEIEIGEKRVIAFNGAGLSVAPEISFEEIAATHK 320 (367)
T ss_dssp TCCBCCCCCCHHHHHHHHHHHHTSSSCEEEEEEEEECGGGSCCC----------CCCCCBCCEEEECCCCCHHHHHHTSS
T ss_pred CCCCCCCCCCCCCHHHHHHHHHCCCCCCEEECHHHHCCCCCCCCCCCCCCHHHCCCCCCCCEEEEECCCCCHHHHHHHCC
T ss_conf 66505665575505899999855799956856044133425887543320001036677861488679735666300022
Q ss_pred ----------------------------------------------E
Q ss_conf ----------------------------------------------8
Q 002647 518 ----------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------a 518 (897)
-
T Consensus 321 ~~~e~~ea~~k~l~d~v~eq~~~Lk~ai~gk~~~~~~~p~~~~~qp~ 367 (367)
T d1iuqa_ 321 NPEEVREAYSKALFDSVAMQYNVLKTAISGKQGLGASTADVSLSQPW 367 (367)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCGGGGCCSSCCEECCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 63889999999999999999999999985689822258888878999
|
| >d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cyp119 species: Archaeon Sulfolobus tokodaii [TaxId: 111955]
Probab=100.00 E-value=0 Score=27647.02 Aligned_cols=1 Identities=0% Similarity=-0.925 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~Y~~~~~lR~~~Pv~~~~~~w~vt~~~di~~vl~d~~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~~~R 80 (367)
T d1ue8a_ 1 MYDWFKQMRKESPVYYDGKVWNLFKYEDCKMVLNDHKRFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTSDPPLHDELR 80 (367)
T ss_dssp CHHHHHHHHHHCSEEECSSCEEECCHHHHHHHHTCTTTEECCCSSTTTTHHHHHTTCCCCCCGGGSSGGGCCTTHHHHHH
T ss_pred CCHHHHHHHHCCCEEEECCEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 90899999856998844998998799999999669853537765567542224466432224555552006867875667
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~f~~~~l~~~~i~~~~~~ll~~l~~~~d~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (367)
T d1ue8a_ 81 NLTADAFNPSNLPVDFVREVTVKLLSELDEEFDVIESFAIPLPILVISKMLGINPDVKKVKDWSDLVALRLGRADEIFSI 160 (367)
T ss_dssp HHHHGGGSGGGSCHHHHHHHHHHHHTTCCSEEEHHHHTTTHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTSSSSSTTTCC
T ss_pred HCCCCCCCHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 30133478665144999999999986303345316665543444210110464211026778888877620004799999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~~~~~~~ag~ett~~~l~~~~~~l~~~~~~~~~~~~~~ 240 (367)
T d1ue8a_ 161 GRKYLELISFSKKELDSRKGKEIVDLTGKIANSNLSELEKEGYFILLMIAGNETTTNLIGNAIEDFTLYNSWDYVREKGA 240 (367)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHCS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHCCCCCHHHHHHH
T ss_conf 99999999999999986423431012344441347777764133210010111222101023777633000111345556
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~ai~E~lR~~p~~~~~~r~~~~~~~l~g~~ip~G~~V~~~~~~~~rdp~~~~dP~~F~P~R~~~~~l~FG~G~r~C~G~ 320 (367)
T d1ue8a_ 241 LKAVEEALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDRTPNPHLSFGSGIHLCLGA 320 (367)
T ss_dssp HHHHHHHHHHSCSBCCEEEEESSCEEETTEEECSSCEEEECHHHHTTCTTTSSSTTSCCTTCCSCCCCTTCCSTTSCTTH
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 77877645205532334432344310221134048754433210035766689722018798999988779987188119
Q ss_pred ----------------------------------------------E
Q ss_conf ----------------------------------------------8
Q 002647 518 ----------------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------------a 518 (897)
+
T Consensus 321 ~lA~~e~~~~l~~Ll~rf~~~~~~~~~~~~~~~~~g~~~l~Vr~~r~ 367 (367)
T d1ue8a_ 321 PLARLEARIALEEFAKKFRVKEIVKKEKIDNEVLNGYRKLVVRVERT 367 (367)
T ss_dssp HHHHHHHHHHHHHHHHHEEEEEEEEEEECSCSSBCCEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
T ss_conf 99999999999999985896634898534587758975236999979
|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Transcription factor MalT domain III domain: Transcription factor MalT domain III species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27575.10 Aligned_cols=1 Identities=0% Similarity=0.271 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~~~ae~~~lrA~~~~~~g~~~~A~~~~~~aL~~~~~~~~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~ 80 (366)
T d1hz4a_ 1 EIKDIREDTMHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQM 80 (366)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 94430566213999999999999888999999999999854868996799999999999999879999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~a~~~~~~~~ 160 (366)
T d1hz4a_ 81 ARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGI 160 (366)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 87501148999999888788788888999998899999986750341256788899888789998145666689999988
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 240 (366)
T d1hz4a_ 161 EVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTA 240 (366)
T ss_dssp HHTTTSCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 87663002468999988888887646678888999999999987311572699999999999986044898999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~Al~l 320 (366)
T d1hz4a_ 241 KPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALKL 320 (366)
T ss_dssp CCCCTTCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 76224666777889999999987587999999999999887642667479999999999999878999999999999997
Q ss_pred ---------------------------------------------E
Q ss_conf ---------------------------------------------8
Q 002647 518 ---------------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~e~e~~~a~~ll~~in 366 (366)
T d1hz4a_ 321 ANRTGFISHFVIEGEAMAQQLRQLIQLNTLPELEQHRAQRILREIN 366 (366)
T ss_dssp HHHHCCCHHHHTTHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHC
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
T ss_conf 6531829999999999999999998659986999999999987559
|
| >d1moqa_ c.80.1.1 (A:) "Isomerase domain" of glucosamine 6-phosphate synthase (GLMS) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: SIS domain superfamily: SIS domain family: double-SIS domain domain: "Isomerase domain" of glucosamine 6-phosphate synthase (GLMS) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27572.08 Aligned_cols=1 Identities=0% Similarity=-0.592 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~m~kEI~eQP~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~I~~vG~GsS~~aa~~~~~~~~~~~~~~v 80 (366)
T d1moqa_ 1 GDKGIYRHYMQKEIYEQPNAIKNTLTGRISHGQVDLSELGPNADELLSKVEHIQILACGTSYNSGMVSRYWFESLAGIPC 80 (366)
T ss_dssp CCCTTCSSHHHHHHHTHHHHHHHHHTTSEETTEECCGGGCSSHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCE
T ss_conf 99999861788999889999999999876368620543103068887308889999822899999999999998439204
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~sef~~~~~~~~~~~lvI~iSqSG~s~~ti~a~~~a~~~g~~~ti~iT~~~~S~la~~ad~~i~~~~g~E~~~~~T 160 (366)
T d1moqa_ 81 DVEIASEFRYRKSAVRRNSLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMTNAGTEIGVAST 160 (366)
T ss_dssp EEEEHHHHHTSCCCCCTTEEEEEEESSSCCHHHHHHHHHHTTTTCSEEEEEESSTTCHHHHHSSEEEECCCCCCCSSSCS
T ss_pred EEEECCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCCEEECCCCCCCCHHH
T ss_conf 99965445244345699987998620589635899999999749973899989999978986074632356654220000
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 k~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~~~g~A~E~ 240 (366)
T d1moqa_ 161 KAFTTQLTVLLMLVAKLSRLKGLDASIEHDIVHGLQALPSRIEQMLSQDKRIEALAEDFSDKHHALFLGRGDQYPIALEG 240 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHTTCSEEEEEECGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHH
T ss_conf 57899999999999986442032026778779999998876889987777899899997367526996577758999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 aLKl~E~~~~~a~~~~~~Ef~HGP~~~i~~~~~vi~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i 320 (366)
T d1moqa_ 241 ALKLKEISYIHAEAYAAGELKHGPLALIDADMPVIVVAPNNELLEKLKSNIEEVRARGGQLYVFADQDAGFVSSDNMHII 320 (366)
T ss_dssp HHHHHHHHCCEEEEEEGGGGGGTGGGGCSTTSCEEEESCCHHHHHHHHHHHHHTGGGTCCEEEEEEGGGCCCCBTTEEEE
T ss_pred HHHHHHHHHHEEEEECHHHHHCCCHHEECCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEE
T ss_conf 99999887674785037776277430230796089846898177999999999997498299996687322445775699
Q ss_pred ---------------------------------------------E
Q ss_conf ---------------------------------------------8
Q 002647 518 ---------------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------------a 518 (897)
-
T Consensus 321 ~~p~~~~~l~pl~~~ip~Qlla~~~A~~~G~~PD~Pr~L~K~vtve 366 (366)
T d1moqa_ 321 EMPHVEEVIAPIFYTVPLQLLAYHVALIKGTDVDQPRNLAKSVTVE 366 (366)
T ss_dssp EECCCCGGGHHHHHHHHHHHHHHHHHHHHTCCSSSCTTCCSCCCCC
T ss_pred ECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEC
T ss_conf 6699756787999999999999999998198999999998785319
|
| >d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cyp119 species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=100.00 E-value=0 Score=27570.93 Aligned_cols=1 Identities=0% Similarity=-0.426 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~y~~~~~lR~~~Pv~~~~~~w~vt~~~~v~~vl~d~~~f~s~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~~~R 80 (366)
T d1io7a_ 1 MYDWFSEMRKKDPVYYDGNIWQVFSYRYTKEVLNNFSKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTSDPPLHDELR 80 (366)
T ss_dssp CHHHHHHHHHHCSEEECSSCEEECSHHHHHHHHHCTTTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGCCTTHHHHHH
T ss_pred CCHHHHHHHHCCCEEEECCEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHH
T ss_conf 90899999835998873998999689999999659400336764555554433355432235555550117857888987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~f~~~~l~~~~~~i~~~a~~ll~~~~~~~~D~~~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (366)
T d1io7a_ 81 SMSADIFSPQKLQTLETFIRETTRSLLDSIDPREDDIVKKLAVPLPIIVISKILGLPIEDKEKFKEWSDLVAFRLGKPGE 160 (366)
T ss_dssp GGGTTTTCHHHHHHHHHHHHHHHHHHHHTCCTTSEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHGGGCTTSCCCTTC
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf 76145565130677888899999999873135563210000000122011001687345799999999999764030146
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~~~~~l~aG~~tt~~~l~~~l~~l~~~~~~~~~~~~~l~ 240 (366)
T d1io7a_ 161 IFELGKKYLELIGYVKDHLNSGTEVVSRVVNSNLSDIEKLGYIILLLIAGNETTTNLISNSVIDFTRFNLWQRIREENLY 240 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSCHHHHHHHTSSCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTCHHHHHHHTCH
T ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHH
T ss_conf 78888889887665420222045665542014589999999999999714420377999999874313322233442001
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~ee~~r~~~~~~~~~R~~~~d~~i~g~~ip~G~~V~~~~~~~~rdp~~~~dP~~F~PeR~~~~~l~FG~G~r~C~G~ 320 (366)
T d1io7a_ 241 LKAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDRNPNPHLSFGSGIHLCLGA 320 (366)
T ss_dssp HHHHHHHHHHSCSBCCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCCSCCCCTTCCGGGSCTTH
T ss_pred HHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 00046553000234300010210024333436789777332010025611258665418898999988788986488369
Q ss_pred ---------------------------------------------E
Q ss_conf ---------------------------------------------8
Q 002647 518 ---------------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------------a 518 (897)
+
T Consensus 321 ~lA~~e~~~~l~~ll~rf~~~~~~~~~~~~~~~~~~~~~lpVrl~~ 366 (366)
T d1io7a_ 321 PLARLEARIAIEEFSKRFRHIEILDTEKVPNEVLNGYKRLVVRLKS 366 (366)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEEEEEECCCSSBCCEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEEEEC
T ss_conf 9999999999999999779882089865787764787554799969
|
| >d1h6za1 c.1.12.2 (A:538-903) Pyruvate phosphate dikinase, C-terminal domain {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Phosphoenolpyruvate/pyruvate domain family: Pyruvate phosphate dikinase, C-terminal domain domain: Pyruvate phosphate dikinase, C-terminal domain species: Trypanosoma brucei [TaxId: 5691]
Probab=100.00 E-value=0 Score=27569.09 Aligned_cols=1 Identities=100% Similarity=1.201 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~~~~~~~~~~~~w~d~~r~i~v~aNi~~~~d~~~a~~~GAdGIGL~RtEflfl~~~~~p~~~e~i~~~~~~~~~~~l~ 80 (366)
T d1h6za1 1 RSPDLKGSFQTILQWCQEMKRLGVRTNADTPADAAKARSFGAEGVGLCRTEHMFFEGSRINFIREMILADSASGRKAALD 80 (366)
T ss_dssp CCSCSTTHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHTTTCCSEEECBCSGGGSTTTHHHHHHHHHSCSSHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHCCCCEECHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHH
T ss_conf 98987458999999875378669997089999999999759984503887998618987882898763235577999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 k~~~~~~~~y~~i~~a~~~~pV~iRtlD~g~dk~~p~~~~~~~e~~~~~~~~~~~~~~~~~~~~E~NP~LG~RGiR~~L~ 160 (366)
T d1h6za1 81 KLLPIQRADFVGILRAMRGLPVTIRLLDPPLHEFVPHDAAAQFELAQKLGMPAEKVRNRVNALHELNPMLGHRGCRLGIT 160 (366)
T ss_dssp HHHHHHHHHHHHHHTTTSSSCEEEECCCSCGGGGCCSSCSSTTTTSCSSSCCHHHHHHHHHSSCCSSSTTSSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHCC
T ss_conf 87788999999999970899879996224322357850555543111003543555532025557884123456655414
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~p~lf~~QlrAilrA~~~~~~~g~~~~l~iMiP~v~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~iG~MiEvPsaal~~ 240 (366)
T d1h6za1 161 YPEIYNMQVRAIIEAAIAVSEEGSSVIPEIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIEVPRAAVTA 240 (366)
T ss_dssp STTHHHHHHHHHHHHHHHHHTTTCCCCEEEEECCCCSHHHHHHHHHHHHHHHHHHHHHSCSCCCCEEEEEECSHHHHHTH
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHH
T ss_conf 80667999999999999987528865401221206679999989999989999887504876441367641213899869
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 d~~a~~vDF~SIGTNDLtQy~la~dR~n~~v~~~~~~~~~~~~~~p~~~~~~~av~~lI~~a~~~~r~~~~~i~vsiCGE 320 (366)
T d1h6za1 241 DSIAQKADFFSFGTNDLTQMGCGFSRDDAGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGICGE 320 (366)
T ss_dssp HHHTTTCSEEEECTTHHHHHHHTCCGGGCHHHHTTTTTTCSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEECSG
T ss_pred HHHHHHCCEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 99863050899601046567765301551134567765200010556606699999999999998775189981997064
Q ss_pred ---------------------------------------------E
Q ss_conf ---------------------------------------------8
Q 002647 518 ---------------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------------a 518 (897)
-
T Consensus 321 ~a~dp~~~~~Li~lGi~~lSvsp~~ip~vk~a~a~~~~~~~r~~~~ 366 (366)
T d1h6za1 321 HGGDPATIGFCHKVGLDYVSCSPFRVPVAIVAAAHASIKDRRAAMK 366 (366)
T ss_dssp GGGCHHHHHHHHHHTCSEEEECGGGHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 0239999999998699979989277699999999854998787459
|
| >d2bvya2 c.1.8.3 (A:5-370) Mannanase A, ManA {Cellulomonas fimi [TaxId: 1708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Mannanase A, ManA species: Cellulomonas fimi [TaxId: 1708]
Probab=100.00 E-value=0 Score=27568.36 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 t~~lvd~~At~~t~~L~~~L~~~~g~~il~Gqq~~~~~g~~~~~~~~~~~~v~~~tG~yPAv~G~D~~~~~~~~~~~~~~ 80 (366)
T d2bvya2 1 TIAIVDADATAETRSLLSYLDGVRGEGILFGHQHTTSFGLTTGPTDGTTSDVKNVTGDFPAVFGWDTLIIEGNERPGLAE 80 (366)
T ss_dssp CBCCSSTTCCHHHHHHHHHHHHHTTTCEEEEEETTTTSCSSSCSCCSSCCHHHHHHSSCBSEEEEETTTTTTSSTTCCSS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCC
T ss_conf 96665888799999999999985489879986146444666687426799999976888776443114567874433223
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~Ggivt~~wH~~nP~~g~~~~~~~~~~~~~vlpg~~~~~~~~~~l~~ia~~a~~Lk~~~~~ 160 (366)
T d2bvya2 81 NTRDENIALFADYIRKADAIGGVNTVSAHVENFVTGGSFYDTSGDTLRAVLPGGSHHAELVAYLDDIAELADASRRDDGT 160 (366)
T ss_dssp SCHHHHHHHHHHHHHHHHHHTCEEEEECCCCCTTTSCCTTCCTTCHHHHHSTTSTTHHHHHHHHHHHHHHHHHCBCTTSC
T ss_pred CCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 67311489999999976306997899971377888986557741689873689970689999999999999998750478
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~VPVl~Rp~HE~nG~WfwWg~~~~~p~~y~~lwr~~~d~l~~~~g~~Nliwvwsp~~~~~~~~~~~~~~YPGDdyVDivG 240 (366)
T d2bvya2 161 LIPIVFRPWHENAGSWFWWGAAYGSPGEYQELYRFTVEYLRDVKGVSNFLYAWGPGGGFGGNRDVYLRTYPGDAFVDVLG 240 (366)
T ss_dssp BCCEEEECSTTTTSSSSTTSTTSSCHHHHHHHHHHHHHHHHHTSCCCSEEEEECCCSCCTTCHHHHGGGCCCTTTCSEEC
T ss_pred CCCEEEEECHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCEEEEEE
T ss_conf 86089831220379855057889998999999999999999725876169986168778865211665288987478988
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~D~Y~~~~~~~~~~~~~~~l~~~~~~a~~~~Kp~altE~G~~~~~~~~~~~~~~W~~~~l~~i~~~~~~~~~~y~~~W~n 320 (366)
T d2bvya2 241 LDTYDSTGSDAFLAGLVADLRMIAEIADEKGKVSAFTEFGVSGGVGTNGSSPAQWFTKVLAAIKADPVASRNAYMETWAN 320 (366)
T ss_dssp CEEEESSCCHHHHHHHHHHHHHHHHHHHHHTCEECBCEEEETTCSSTTSCCCTTHHHHHHHHHHHSTTTTCCSEEEECCC
T ss_pred EECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECC
T ss_conf 74457888752278999999999999873699579942002578644678742589999999873721001048988548
Q ss_pred ---------------------------------------------E
Q ss_conf ---------------------------------------------8
Q 002647 518 ---------------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~~p~~g~~s~~dF~~~~~dp~~~f~~~l~~~y~~~~~~~~ 366 (366)
T d2bvya2 321 FDAGQHFVPVPGDALLEDFQAYAADPFTLFASEVTGAFDRTVAAAP 366 (366)
T ss_dssp CSSSSCSSCCTTCTTHHHHHHHHHSTTEEBGGGCCSTTCCCCCBCC
T ss_pred CCCCCCCEECCCCCCHHHHHHHHCCCHHHHHHHCCHHHCCCCCCCC
T ss_conf 9988761236997469999999759566542227032147666797
|
| >d1u5ua_ e.5.1.2 (A:) Allene oxide synthase-lipoxygenase protein, N-terminal domain {Black sea rod (Plexaura homomalla) [TaxId: 47982]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Heme-dependent catalase-like superfamily: Heme-dependent catalase-like family: Allene oxide synthase domain: Allene oxide synthase-lipoxygenase protein, N-terminal domain species: Black sea rod (Plexaura homomalla) [TaxId: 47982]
Probab=100.00 E-value=0 Score=27567.73 Aligned_cols=1 Identities=0% Similarity=-1.620 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~HakG~ga~G~f~v~~d 80 (366)
T d1u5ua_ 1 WKNFGFEIFGEKYGQEELEKRIKDEHTPPPDSPVFGGLKLKLKKEKFKTLFTLGTTLKGFRRATHTVGTGGIGEITIVND 80 (366)
T ss_dssp CCCCHHHHHHHHHCHHHHHHHHHHHTSCCCCCTTTHHHHHHHHHHHHHHHHHHHHHHTTTSCSSSCSEEEEEEEEEECSS
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECC
T ss_conf 97620778877632577664000457899874223475431189999999865411468756654775645999998079
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~f~~G~~~Pv~vRfS~~~G~~D~~~d~RG~AiKf~~~~ge~~~D~v~~n~pvF~~rd~~~F~~~~~a~k~~p~ 160 (366)
T d1u5ua_ 81 PKFPEHEFFTAGRTFPARLRHANLKYPDDAGADARSFSIKFADSDSDGPLDIVMNTGEANIFWNSPSLEDFVPVEEGDAA 160 (366)
T ss_dssp CCSCCCSSSCTTCEEEEEEEEEBSSCSCTTSEECBEEEEESSSSSSCCSCEEEEEESSSCSCCSHHHHHHHTTCCTTHHH
T ss_pred CHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCHH
T ss_conf 01655876179975679999258888865567877369987658987325786337774304798886888860587637
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~f~~~~Pe~~~~~~~~~r~~P~s~~~~~y~s~~tf~fvn~~G~~~yvK~~~~P~~~~~~~~~e~~~~~~~~~~~~~~~~ 240 (366)
T d1u5ua_ 161 EEYVYKNPYYYYNLVEALRRAPDTFAHLYYYSQVTMPFKAKDGKVRYCRYRALPGDVDIKEEDESGRLTEEEQRKIWIFS 240 (366)
T ss_dssp HHHHTTCHHHHHHHHHHCEESCSCGGGCCEECCSCEEEECTTCCEEEEEEEEEESSSCCCGGGCTTCCCHHHHTTTTCCS
T ss_pred HHHHHCCHHHHHHHHHHCCCCCCCCCCCCEECCCCEEEECCCCCEEEEEEEEEECCCCCCCCHHHHHCCCHHHHHHHCCC
T ss_conf 89987098999999985577999834475002261787847898899999998457776642444323722344321246
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~d~Lr~dl~~~l~~g~~~~~l~vQl~~~~d~d~~~i~D~Tk~Wpe~~~P~~~vG~ltl~~~~~~~e~EqlaF 320 (366)
T d1u5ua_ 241 RHENEKRPDDYLRKEYVERLQKGPVNYRLQIQIHEASPDDTATIFHAGILWDKETHPWFDLAKVSIKTPLSPDVLEKTAF 320 (366)
T ss_dssp CCTTCCSCTTHHHHHHHHHHHHSCEEEEEEEEEEECCTTCCGGGGCTTSCCCTTTSCCEEEEEEEEEEECCHHHHHHCCC
T ss_pred CCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHCC
T ss_conf 54102576377899999998679954999999546354789998887516886567637879999799897057576524
Q ss_pred ---------------------------------------------E
Q ss_conf ---------------------------------------------8
Q 002647 518 ---------------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------------a 518 (897)
+
T Consensus 321 ~P~~~~pgi~~~~~~~~~d~~si~~~R~~vY~~s~~~R~~~~~~~~ 366 (366)
T d1u5ua_ 321 NIANQPASLGLLEAKSPEDYNSIGELRVAVYTWVQHLRKLKIGSLV 366 (366)
T ss_dssp CTTCCCTTSCCCCCSSSSSTTHHHHHHHHHHHHHHHHHHHTTTCCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 8755699837778522243442888999999999998754501569
|
| >d1jq5a_ e.22.1.2 (A:) Glycerol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Dehydroquinate synthase-like superfamily: Dehydroquinate synthase-like family: Iron-containing alcohol dehydrogenase domain: Glycerol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=0 Score=27567.40 Aligned_cols=1 Identities=0% Similarity=-0.559 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~f~~P~~~~~G~gal~~l~~~l~~~g~r~lvvtd~~~~~~~~~~l~~~L~~~~i~~~~~~~~~~p~~~~v~~~~~~ 80 (366)
T d1jq5a_ 1 AAERVFISPAKYVQGKNVITKIANYLEGIGNKTVVIADEIVWKIAGHTIVNELKKGNIAAEEVVFSGEASRNEVERIANI 80 (366)
T ss_dssp CCCBCCCCCSEEEEETTGGGGHHHHHTTTCSEEEEEECHHHHHHTHHHHHHHHHTTTCEEEEEECCSSCBHHHHHHHHHH
T ss_pred CCCCEEECCCEEEEECCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHH
T ss_conf 99858958963999039999999999974994899989857899999999999877996999981899999999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~D~IiavGGGs~iD~aK~iA~~~~~p~i~IPTT~gtgse~t~~avi~~~~~~~~~~~~~~~~P~~vi~Dp~l~~t 160 (366)
T d1jq5a_ 81 ARKAEAAIVIGVGGGKTLDTAKAVADELDAYIVIVPTAASTDAPTSALSVIYSDDGVFESYRFYKKNPDLVLVDTKIIAN 160 (366)
T ss_dssp HHHTTCSEEEEEESHHHHHHHHHHHHHHTCEEEEEESSCCSSCTTCSEEEEECTTSCEEEEEECSSCCSEEEEEHHHHHT
T ss_pred HHCCCCCEEEEECCCCCCCCHHEEEECCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCHHH
T ss_conf 62038868998168864422000120466535402434434320013212323567422110114557789998610432
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 lP~~~~~sg~~Dal~h~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (366)
T d1jq5a_ 161 APPRLLASGIADALATWVEARSVIKSGGKTMAGGIPTIAAEAIAEKCEQTLFKYGKLAYESVKAKVVTPALEAVVEANTL 240 (366)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHTCCCTTSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 32788898677788899999998860654323034479999999999999987468876667635658999999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~g~~~~~~~~~~~H~i~h~l~~~~g~~~~~~HG~~va~g~~~~~~l~~~~~~~~~~~~~l~~~lglP~~L~dlgi~~~~ 320 (366)
T d1jq5a_ 241 LSGLGFESGGLAAAHAIHNGFTALEGEIHHLTHGEKVAFGTLVQLALEEHSQQEIERYIELYLCLDLPVTLEDIKLKDAS 320 (366)
T ss_dssp HHHHHHHHHCCCHHHHHHHHGGGSCSGGGGSCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCCCSTTTTTCTTCC
T ss_pred HHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCC
T ss_conf 60433467876645211012676237764767633779999999998428899999999999986999999994989777
Q ss_pred ---------------------------------------------E
Q ss_conf ---------------------------------------------8
Q 002647 518 ---------------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------------a 518 (897)
-
T Consensus 321 ~~~l~~ia~~a~~~~~~~~nP~~~t~edi~~il~~a~~~~~~~~~~ 366 (366)
T d1jq5a_ 321 REDILKVAKAATAEGETIHNAFNVTADDVADAIFAADQYAKAYKEK 366 (366)
T ss_dssp HHHHHHHHHHHTSTTCGGGGTCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 9999999999840874147999999999999999999999987209
|
| >d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: SelA-like domain: Hypothetical protein MJ0158 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=100.00 E-value=0 Score=27566.39 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~r~~~~~~~~~~~i~~~g~~~i~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~a 80 (366)
T d2aeua1 1 LRLEKARKIILEILNEKGRDALYDLSGLSGGFLIDEKDKALLNTYIGSSYFAEKVNEYGLKHLGGDENDKCVGFNRTSSA 80 (366)
T ss_dssp CCCCHHHHHHHHHHHHTCGGGCEECSSCCCCCCCCHHHHHHHTSTTHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHH
T ss_pred CCHHHHHHHHHHHHCHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHH
T ss_conf 96366788899985633330275432688888864889999998438245689999999987068984479996889999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~l~al~~~~~vi~~~~~~~~~~~~~~~~l~g~~~v~~~d~e~l~~~i~~~tk~i~~~~p~n~~~~~~~~l~~i~~ia 160 (366)
T d2aeua1 81 ILATILALKPKKVIHYLPELPGHPSIERSCKIVNAKYFESDKVGEILNKIDKDTLVIITGSTMDLKVIELENFKKVINTA 160 (366)
T ss_dssp HHHHHHHHCCSEEEEECSSSSCCTHHHHHHHHTTCEEEEESCHHHHHTTCCTTEEEEEECBCTTSCBCCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCEEECCCCHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHH
T ss_conf 99999983899979994699862419988976288677799999999736877607999945888867879999999874
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~i~De~y~~~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~~G~i~~~~~~i~~~~~~~~~~g~~~~~~~~~a~~ 240 (366)
T d2aeua1 161 KNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLMEGPRGGLLAGKKELVDKIYIEGTKFGLEAQPPLLAGIY 240 (366)
T ss_dssp HHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSSSSCSCEEEEEEHHHHHHHHHHHHTTTCBCCHHHHHHHH
T ss_pred CCCCEEEEEECCCCCCCCCCCCCCCHHHCCCEEEEECCCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHH
T ss_conf 00817899956721432364468987662861787136444545521589706778999999972235568779899888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~aL~tl~~~r~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Ll~~~gV 320 (366)
T d2aeua1 241 RALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVYKDDTINIKKLIEIGFNLLKNYGI 320 (366)
T ss_dssp HHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEEESSHHHHHHHHHHHHHHHHHHHCE
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCEEECCCCHHHHHHHHHHHCCE
T ss_conf 89986049999999999999999988604111133566667543457630110477760102456879999999981988
Q ss_pred ---------------------------------------------E
Q ss_conf ---------------------------------------------8
Q 002647 518 ---------------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------------a 518 (897)
+
T Consensus 321 ~~ip~~~~p~~~~~lRis~~~~~~~~i~~d~l~~ai~~~lK~~~~~ 366 (366)
T d2aeua1 321 ITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIKMAFKS 366 (366)
T ss_dssp ECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHHHTCC
T ss_pred EEEECCCCCCCCCEEEEECCCCCHHHCCHHHHHHHHHHHHHHHHCC
T ss_conf 9997898889998799951655411089999999999999998459
|
| >d1fn9a_ d.196.1.1 (A:) Outer capsid protein sigma 3 {Reovirus [TaxId: 10891]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Outer capsid protein sigma 3 superfamily: Outer capsid protein sigma 3 family: Outer capsid protein sigma 3 domain: Outer capsid protein sigma 3 species: Reovirus [TaxId: 10891]
Probab=100.00 E-value=0 Score=27503.60 Aligned_cols=1 Identities=100% Similarity=1.633 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 MEVRlPNfHSvVE~I~nSYe~rp~~yst~egWd~~~f~~PDVIkVG~AYCCaQCCGVLGapp~~~~~FPHHrCHQq~~R~ 80 (365)
T d1fn9a_ 1 MEVCLPNGHQVVDLINNAFEGRVSIYSAQEGWDKTISAQPDMMVCGGAVVCMHCLGVVGSLQRKLKHLPHHRCNQQIRHQ 80 (365)
T ss_dssp CCCCCCCHHHHHHHHHHHTTTCCCEEBTTTBTCCSSCCCCSEEEETTEEEETTTTEEEEEGGGTCCSCCCCCCCCCCCHH
T ss_pred CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHC
T ss_conf 96446771149999998874577644520131454314876599867587400154336786678607613676776404
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 dtPLLrfvgRvTaH~KRgmLd~~a~~~~~i~D~~~e~~~rv~~egg~lvE~~~~~lD~~s~~~SI~sdWT~PLe~~~dlD 160 (365)
T d1fn9a_ 81 DYVDVQFADRVTAHWKRGMLSFVAQMHEMMNDVSPDDLDRVRTEGGSLVELNWLQVDPNSMFRSIHSSWTDPLQVVDDLD 160 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHCCEEEECCGGGSSTTSTTTCTTCCTTSCCCCCTTHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHCCCCCCHHCCCCCC
T ss_conf 75577655578887765279999999999873077776676636886331333421606653334304677201014420
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 tr~D~~~tal~~MIDsSdl~pnf~mrdpshafngvkl~gdarqt~fsrtf~~rsslewgvmvydysele~dp~kgr~yr~ 240 (365)
T d1fn9a_ 161 TKLDQYWTALNLMIDSSDLIPNFMMRDPSHAFNGVKLGGDARQTQFSRTFDSRSSLEWGVMVYDYSELEHDPSKGRAYRK 240 (365)
T ss_dssp HHHHHHHHHHHHHHHHTTCEESSEESCTHHHHTTSCBCGGGGGCCCCSSCCTTSCCCCCCEEECCHHHHHCGGGCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEEHHHHCCCCCCCCHHHH
T ss_conf 35789999888600165305332415833322662005740002000025776631444799765663368544502355
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 elvtpardfghfglshysrattp~lgkmpavfsgmltgnckmyp~i~gtak~kt~~kl~~avn~~wgvekirya~gpgg~ 320 (365)
T d1fn9a_ 241 ELVTPARDFGHFGLSHYSRATTPILGKMPAVFSGMLTGNCKMYPFIKGTAKLKTVRKLVEAVNHAWGVEKIRYALGPGGM 320 (365)
T ss_dssp HHTSTHHHHCCGGGCCCCEEECCCSTTCCEEECCGGGTSCCEEECCCHHHHHGGGHHHHHHHHHHSCHHHHHHHHCTTHH
T ss_pred HHCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCC
T ss_conf 53673021364441000223671002562565310147621431023620024378899987745403420221168863
Q ss_pred --------------------------------------------E
Q ss_conf --------------------------------------------8
Q 002647 518 --------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------a 518 (897)
|
T Consensus 321 tgwy~rtmqqapivltpa~ltmfpdt~kfgd~~~pvmigdpmi~g 365 (365)
T d1fn9a_ 321 TGWYNRTMQQAPIVLTPAALTMFPDTIKFGDLNYPVMIGDPMILG 365 (365)
T ss_dssp HHHHHHHHHHHHHHTSCGGGGCCCSSCSSCSSSSCEEECCCEEEC
T ss_pred CHHHHHHHHHCCEEECHHHHCCCCCCCCCCCCCCCEECCCCCCCC
T ss_conf 324443453088673468850277742135667863317864369
|
| >d1w85a_ c.36.1.11 (A:) Pyruvate dehydrogenase E1-alpha, PdhA {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiamin diphosphate-binding fold (THDP-binding) superfamily: Thiamin diphosphate-binding fold (THDP-binding) family: Branched-chain alpha-keto acid dehydrogenase PP module domain: Pyruvate dehydrogenase E1-alpha, PdhA species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=0 Score=27497.37 Aligned_cols=1 Identities=0% Similarity=-0.426 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~p~ls~e~l~~~yr~M~l~R~~e~~~~~l~~qG~ig~~h~~~GqEa 80 (365)
T d1w85a_ 1 TFQFPFAEQLEKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEA 80 (365)
T ss_dssp CCCCCHHHHHHHHHHTCCEECSBCTTSCBSCGGGCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSCCCCTTCHH
T ss_pred CCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
T ss_conf 98797433321022139769999999999885457999999999999999999999999999997799656008898699
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~vg~~~~l~~~D~i~~~yR~hg~~la~G~~~~~~~~~~~G~~~g~~~~~~~~~~~~~~ivG~~~p~AvG~A~a~k~~~~ 160 (365)
T d1w85a_ 81 SQIASHFALEKEDFILPGYRDVPQIIWHGLPLYQAFLFSRGHFHGNQIPEGVNVLPPQIIIGAQYIQAAGVALGLKMRGK 160 (365)
T ss_dssp HHHHHHHTCCTTCEEECCSSCHHHHHHTTCCHHHHHHHHHTCGGGGCCCTTCCBCCCCCSTTHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHCCCCCEEEECCCCHHEEEECCCCHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf 99999986797687631366112255569999999986279988667888755605533357666412567765643046
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~v~v~~~GDGa~~eG~f~EalN~A~~~~lPvlfv~eNN~~aist~~~~~~~~~~~~~r~~~~Gi~~~~vDG~D~~~v~~ 240 (365)
T d1w85a_ 161 KAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYA 240 (365)
T ss_dssp SCCEEEEEETGGGGSHHHHHHHHHHHHTTCCEEEEEEECSEETTEEGGGTCSCSCSGGGGGGTTCCEEEEETTCHHHHHH
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEECCHHHHHHH
T ss_conf 88146631677643126888887764336674379997024333322202133211111012357617981440687999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 a~~~A~~~~R~g~gP~lie~~tyR~~gHs~~dd~~~~YR~~eEi~~w~~~DPI~~~~~~L~~~g~~~~~el~~i~~e~~~ 320 (365)
T d1w85a_ 241 AVKAARERAINGEGPTLIETLCFRYGPHTMSGDDPTRYRSKELENEWAKKDPLVRFRKFLEAKGLWSEEEENNVIEQAKE 320 (365)
T ss_dssp HHHHHHHHHHTTSCCEEEEEECCCSSCSCSSCC------CHHHHHHHHTTCHHHHHHHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 99999997423796179974134356667868863124774789998848989999999998799999999999999999
Q ss_pred --------------------------------------------E
Q ss_conf --------------------------------------------8
Q 002647 518 --------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------a 518 (897)
-
T Consensus 321 eV~~A~~~A~~sP~P~~~~l~~~Vy~e~p~~l~eq~~~~~~~~~~ 365 (365)
T d1w85a_ 321 EIKEAIKKADETPKQKVTDLISIMFEELPFNLKEQYEIYKEKESK 365 (365)
T ss_dssp HHHHHHHHHHTSCCCCHHHHHHTSCSSCCHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
T ss_conf 999999999868998989998453238998899999999887469
|
| >d1zfja1 c.1.5.1 (A:2-94,A:221-492) Inosine monophosphate dehydrogenase (IMPDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Inosine monophosphate dehydrogenase (IMPDH) family: Inosine monophosphate dehydrogenase (IMPDH) domain: Inosine monophosphate dehydrogenase (IMPDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=100.00 E-value=0 Score=27497.11 Aligned_cols=1 Identities=0% Similarity=-1.157 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~k~~r~~l~fdDVllvP~~st~~s~~vdl~~~it~~~~~~iPIIsA~MDtV~~~~mA~~ls~~Gglgvlhr~~~~~ 80 (365)
T d1zfja1 1 SNWDTKFLKKGYTFDDVLLIPAESHVLPNEVDLKTKLADNLTLNIPIITAAMDTVTGSKMAIAIARAGGLGVIHKNMSIT 80 (365)
T ss_dssp CGGGGSSCCCCCCGGGEEECCCCCCSCGGGCCCCEEEETTEEESSSEEECCCTTTCSHHHHHHHHHTTCEEEECCSSCHH
T ss_pred CCCCHHHHHCCCCCCEEEEECCCCCCCHHHCEEEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEECCCCCHH
T ss_conf 97211223026880108985787776776726237964895268988978988768889999999779916974866789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 e~~~~~~~~~~~~~~~~v~aavGv~~~~~er~~~l~~agvd~ivID~A~G~s~~~~~~i~~ik~~~~~~~iIaGNV~T~e 160 (365)
T d1zfja1 81 EQAEEVRKVKRSEGRLLVAAAVGVTSDTFERAEALFEAGADAIVIDTAHGHSAGVLRKIAEIRAHFPNRTLIAGNIATAE 160 (365)
T ss_dssp HHHHHHHHHHHHTSCBCCEEEECSSTTHHHHHHHHHHHTCSEEEECCSCTTCHHHHHHHHHHHHHCSSSCEEEEEECSHH
T ss_pred HHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCHH
T ss_conf 98877665443037569999944681277899999986998899978865543214788999865887644411343489
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~a~~L~~aGaD~VkVGiG~Gs~CTTr~~tGvGvPq~sai~~~~~~~~~~~~~iIADGGi~~~GDi~KAla~GAd~VMlG~ 240 (365)
T d1zfja1 161 GARALYDAGVDVVKVGIGPGSICTTRVVAGVGVPQVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKALAAGGNAVMLGS 240 (365)
T ss_dssp HHHHHHHTTCSEEEECSSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEEST
T ss_pred HHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHCCCCEEEECC
T ss_conf 99999866976378640256445676301342242138999999997579569805884762066655321587898642
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~lAg~~EsPG~~~~~~g~~~k~~~Gm~s~~a~~~~~~~r~~~~~~~~~~~~~~eG~~~~v~~~G~~~~~~~~l~gglrs~ 320 (365)
T d1zfja1 241 MFAGTDEAPGETEIYQGRKYKTYRGMGSIAAMKKGSSDRYFQGSVNEANKLVPEGIEGRVAYKGAASDIVFQMLGGIRSG 320 (365)
T ss_dssp TTTTBSSCCCCEEEETTEEEEEEECTTSHHHHCC--------------CCCCCSBCEEEEECCBCHHHHHHHHHHHHHHH
T ss_pred HHCCCCCCCCCEEEECCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHH
T ss_conf 21046678974797778475552775557555456644434455443221224684478546787789999999999998
Q ss_pred --------------------------------------------E
Q ss_conf --------------------------------------------8
Q 002647 518 --------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------a 518 (897)
.
T Consensus 321 m~y~G~~~l~e~~~~~~fv~vt~~~~~E~~~h~~~~~~~~~~y~~ 365 (365)
T d1zfja1 321 MGYVGAGDIQELHENAQFVEMSGAGLIESHPHDVQITNEAPNYSV 365 (365)
T ss_dssp HHHTTCSSHHHHHHHCCEEECCHHHHHHHSCCSSCCSSCBTTBC-
T ss_pred HHHCCCCCHHHHHHCCEEEEECCCCCCCCCCCCEEEECCCCCCCC
T ss_conf 762487749999629889999922010258862577157899869
|
| >d1um0a_ d.258.1.1 (A:) Chorismate synthase, AroC {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Chorismate synthase, AroC superfamily: Chorismate synthase, AroC family: Chorismate synthase, AroC domain: Chorismate synthase, AroC species: Helicobacter pylori [TaxId: 210]
Probab=100.00 E-value=0 Score=27498.34 Aligned_cols=1 Identities=0% Similarity=-0.426 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 Mns~G~~~r~tt~GESHG~~ig~vIdG~PaGl~i~~e~I~~~L~RR~pG~~~~~t~R~E~D~veilSGv~~G~TtG~PI~ 80 (365)
T d1um0a_ 1 MNTLGRFLRLTTFGESHGDVIGGVLDGMPSGIKIDYALLENEMKRRQGGRNVFITPRKEDDKVEITSGVFEDFSTGTPIG 80 (365)
T ss_dssp CCEECSSSEEEECCSCCSSEEEEEEECCCBTCBCCHHHHHHHHHHHTTCCSSCCCHHHHSCEEEECSSEETTEECSSCEE
T ss_pred CCCCCCCEEEEEEECCCCCEEEEEEECCCCCCEECHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECEECCEECCCCCE
T ss_conf 98764422788515578884489992408688858999999986679999998766899982799027368826577405
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~I~N~d~~s~dy~~~~~~pRPGHAD~~~~~KYg~~D~RgggRsSaReTa~rVaaGaiAk~lL~~~gI~v~~~v~~IG~i 160 (365)
T d1um0a_ 81 FLIHNQRARSKDYDNIKNLFRPSHADFTYFHKYGIRDFRGGGRSSARESAIRVAAGAFAKMLLREIGIVCESGIIEIGGI 160 (365)
T ss_dssp EEEECCCSCCCCCCCCTTBCCTTSTHHHHHHHHCCCCCCCTTCSTHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEETTE
T ss_pred EEECCCCCCCCCHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC
T ss_conf 55414656751456664257777761111100785367888618899999999999999988875471589999944544
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~d~~~~~~m~~~I~~ak~~gDSvGG~ve~~~~gv~~~~g~P~GlG~P~f~kLda~LA~A~mSI 240 (365)
T d1um0a_ 161 KAKNYDFNHALKSEIFALDEEQEEAQKTAIQNAIKNHDSIGGVALIRARSIKTNQKLPIGLGQGLYAKLDAKIAEAMMGL 240 (365)
T ss_dssp ECSSCCHHHHHHSTTCBSCHHHHHHHHHHHHHHHHTTCCBCEEEEEEEEESSTTCCCCSCCSBTTTBCHHHHHHHHHHTS
T ss_pred CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
T ss_conf 45431011202444036872667888999999985188768668999855643444786557876421236999877425
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 pAvKgVE~G~Gf~~a~~~GSe~nD~~~~~~~~tN~aGGi~GGiSnG~pI~~rva~KP~sSI~~pq~Tvd~~~~e~~~~~~ 320 (365)
T d1um0a_ 241 NGVKAVEIGKGVESSLLKGSEYNDLMDQKGFLSNRSGGVLGGMSNGEEIIVRVHFKPTPSIFQPQRTIDINGNECECLLK 320 (365)
T ss_dssp TTEEEEEETTGGGGGGSBHHHHCCCEETTEESCCTTTTEETTEECSSCEEEEEEECCCSCCSSCEEEEBTTSCEEEECCC
T ss_pred CCEEEEEECCCHHHHHCCHHHHCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEEECCCCCCCCCCCCEECCCCEEEEEEC
T ss_conf 33235641454666652576506732478874567785105767887669999957875567755435779987776016
Q ss_pred --------------------------------------------E
Q ss_conf --------------------------------------------8
Q 002647 518 --------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------a 518 (897)
-
T Consensus 321 gRhDpCivprA~~V~EAm~alvlaD~~L~~~~~~~~~~k~~~~~~ 365 (365)
T d1um0a_ 321 GRHDPCIAIRGSVVCESLLALVLADMVLLNLTSKIEYLKTIYNEN 365 (365)
T ss_dssp SCCCSCTHHHHHHHHHHHHHHHHHHHHHHGGGSBHHHHHHHHTTC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 988970726528999999999999999997563599999874179
|
| >d2pnwa1 b.52.1.4 (A:5-369) Membrane-bound lytic murein transglycosylase A, MLTA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double psi beta-barrel superfamily: Barwin-like endoglucanases family: MLTA-like domain: Membrane-bound lytic murein transglycosylase A, MLTA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=0 Score=27497.14 Aligned_cols=1 Identities=0% Similarity=-1.390 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 f~l~pvsf~~LPGW~~Dd~~~al~Af~~SC~~l~~~~~~~~~~~~~t~~~~~~~c~~a~~~~~~~~~~aR~Ffe~~F~py 80 (365)
T d2pnwa1 1 FSIDEVSFRDLPGWGQDDPRKLFPAMATILSHLRNAKPYRTGALGITAAELVSLLELAERGQVNSPEQARQFFETNSVPF 80 (365)
T ss_dssp CEEEECCGGGSTTGGGCCCTTHHHHHHHHHHHHTSSCCCCCCTTCCCHHHHHHHHHHHHHCCCCSHHHHHHHHHHHEEEE
T ss_pred CCCEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCEEE
T ss_conf 96337188778894112499999999999998721785545666778999999999998535699899999999718899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~v~~~~~~~Gl~TGYYEP~l~gS~~~~~~y~~PlY~~P~dLv~vdl~~f~~~l~~~~~~gR~~~~~~~py~~R~~I~~g~ 160 (365)
T d2pnwa1 81 RISPAQGKSGFVTAFYEPELEVSATPDDVWRYPIYRRPPELVDIDNDNRPDGFDPSYAFGKADEEGISYFPDRRAIDEGC 160 (365)
T ss_dssp EEEC----CEEEEEEEECEEEEESSCCSSSCEEEEBCCTTEEECCTTTCCTTCCTTCCEEEEETTEEECCCCHHHHHTTT
T ss_pred EECCCCCCCEEEEEEEEEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCC
T ss_conf 94048987536898667767000378988987744689531006622255434665302443168766777445554465
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 l~~~g~elaw~~d~vd~fflqIQGSgrv~l~dG~~~rv~yag~NG~pY~sigr~Li~~G~i~~~~~sm~~ir~wl~~nP~ 240 (365)
T d2pnwa1 161 LRGRGLEIAWARSKVDLFFVHVQGAARLVFPDGAIKRITYAAKAGHVFSPIGRLLLDRGELDPKTISMQTIRQWLADHPD 240 (365)
T ss_dssp TTTSSCEEEEESCHHHHHHHHHHTEEEEECTTSCEEEEEEEEECSCCCCCHHHHHHHTTCSCTTTCCHHHHHHHHHHCGG
T ss_pred CCCCCCEEEEECCHHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCHHHCCHHHHHHHHHHCHH
T ss_conf 46778623673685777886303617999089998999871678986505679998768878210799999999997969
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~ll~~N~syvFFr~~~~~~~~~Gp~Ga~gvpLtp~rSiAvD~~~~plG~p~~l~~~~~~~~~~~~~~~rl~~aqDTG 320 (365)
T d2pnwa1 241 EVDGVLWHNRSYIFFREADVAGLDMGPIAAAKVPLVAGRALAVDRLIHTFGLPFFIHAPTLTHLDDGKPFARLMLALDTG 320 (365)
T ss_dssp GHHHHHTTCCCCEEEEEC-------CCBCTTSSBCCTTTEEECCTTTCCTTCEEEEEETTCCTTTTTSCEEEEEEEEECC
T ss_pred HHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEECCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECC
T ss_conf 99999860997599887788776789756137120125035405542578865999656777689987100669997446
Q ss_pred --------------------------------------------E
Q ss_conf --------------------------------------------8
Q 002647 518 --------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------a 518 (897)
-
T Consensus 321 gAIkG~~R~D~f~G~G~~A~~~Ag~~~~~g~~~~Llpk~~~~r~~ 365 (365)
T d2pnwa1 321 SAIVGPARGDIFTGSGFEAGELAGTVRNEADFYILLPRIAAERYR 365 (365)
T ss_dssp TTCCSTTEEEEEEEESHHHHHHHHTCEEEEEEEEEEEHHHHGGGC
T ss_pred CCCCCCCCEEEEEECCHHHHHHHHCCCCCEEEEEEEECCHHHHCC
T ss_conf 523689726997408889998860768744799998734354439
|
| >d1zkda1 c.66.1.52 (A:2-366) Hypothetical protein RPA4359 {Rhodopseudomonas palustris [TaxId: 1076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: RPA4359-like domain: Hypothetical protein RPA4359 species: Rhodopseudomonas palustris [TaxId: 1076]
Probab=100.00 E-value=0 Score=27494.14 Aligned_cols=1 Identities=0% Similarity=-0.759 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~L~~~i~~~i~~~G~i~f~~fM~~~LY~p~~GYY~~~~~iG~~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~~~~ 80 (365)
T d1zkda1 1 IDQTALATEIKRLIKAAGPMPVWRYMELCLGHPEHGYYVTRDPLGREGDFTTSPEISQMFGELLGLWSASVWKAADEPQT 80 (365)
T ss_dssp CCSSHHHHHHHHHHHHHCSEEHHHHHHHHHHCTTTCTTTCC--------CCSHHHHCHHHHHHHHHHHHHHHHHTTCCSS
T ss_pred CCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 97207899999999956985599999997079986344789978899886788734799999999999999997177766
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~ivE~GaG~G~La~dil~~l~~~~~~~~~~~~~~vE~s~~L~~~Q~~~l~~~~~i~w~~~~~~~~~~~g~iiaNE~fDA 160 (365)
T d1zkda1 81 LRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGIRNIHWHDSFEDVPEGPAVILANEYFDV 160 (365)
T ss_dssp EEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTCSSEEEESSGGGSCCSSEEEEEESSGGG
T ss_pred CEEEECCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCEECCCHHHCCCCCEEEEECCCCCC
T ss_conf 16995188611788866554123311355405898435456778898874166540111474243558759993255755
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 lPv~~~~~~~~~~~E~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~G~~l~i 240 (365)
T d1zkda1 161 LPIHQAIKRETGWHERVIEIGASGELVFGVAADPIPGFEALLPPLARLSPPGAVFEWRPDTEILKIASRVRDQGGAALII 240 (365)
T ss_dssp SCCEEEEEETTEEEEEEEEECTTSCEEEEECSSCCTTCGGGSCGGGGGCCTTCEEEECCSHHHHHHHHHHHHHCEEEEEE
T ss_pred CCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 00128997475421322232255204776310212467763033443147886323565899998765666405653433
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 DYG~~~~~~~~~l~~~~~h~~~d~l~~pG~~DIT~~VnFs~L~~~~~~~g~~~~~~~tQ~~FL~~~GI~~~~~~l~~~~~ 320 (365)
T d1zkda1 241 DYGHLRSDVGDTFQAIASHSYADPLQHPGRADLTAHVDFDALGRAAESIGARAHGPVTQGAFLKRLGIETRALSLMAKAT 320 (365)
T ss_dssp EEEESSCCBCCCCEEECSSSEECTTSSTTSSEEECCEEHHHHHHHHHHTTCEEEEEEEHHHHHHHTTHHHHHHHHHHTSC
T ss_pred CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEECHHHHHHHHHHCCCCEECCCCHHHHHHHCCHHHHHHHHHCCCC
T ss_conf 10045554444203344443366213898753265118899999987458615234358999997889999999975399
Q ss_pred --------------------------------------------E
Q ss_conf --------------------------------------------8
Q 002647 518 --------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~~~~~~~Li~p~~~~MGe~FKVl~~~~~~~~~~~gf~~~ 365 (365)
T d1zkda1 321 PQVSEDIAGALQRLTGEGRGAMGSMFKVIGVSDPKIETLVALSDD 365 (365)
T ss_dssp HHHHHHHHHHHHHHHCEETTEETTTEEEEEEECTTCCCCTTTTCC
T ss_pred HHHHHHHHHHHHHHCCCCCHHCCHHEEEEEEECCCCCCCCCCCCC
T ss_conf 889999999999726988100211279999817999988898999
|
| >d3c8ya1 c.96.1.1 (A:210-574) Fe-only hydrogenase, catalytic domain {Clostridium pasteurianum [TaxId: 1501]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Fe-only hydrogenase superfamily: Fe-only hydrogenase family: Fe-only hydrogenase domain: Fe-only hydrogenase, catalytic domain species: Clostridium pasteurianum [TaxId: 1501]
Probab=100.00 E-value=0 Score=27491.82 Aligned_cols=1 Identities=0% Similarity=-0.161 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~i~~v~~~l~~~~k~vV~siaP~~r~sla~~f~l~~~~~~~~kl~~~lk~LGF~~V~dt~~gad~~~~e~~~E~~~r~~~ 80 (365)
T d3c8ya1 1 HMDRVKNALNAPEKHVIVAMAPSVRASIGELFNMGFGVDVTGKIYTALRQLGFDKIFDINFGADMTIMEEATELVQRIEN 80 (365)
T ss_dssp CHHHHHHHHHCTTCEEEEEECGGGGGTGGGGGTCCSSCCCHHHHHHHHHHHTCSEEEEHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHC
T ss_conf 97899999968995899998927899999984899430028999999998699999983788899999999999999865
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~P~isS~CPg~V~yiEk~~PeLip~ls~v~SP~~~~g~liK~~~~~~~~~~~~~i~~V~I~PC~aKK~Ea~r~e~~~ 160 (365)
T d3c8ya1 81 NGPFPMFTSCCPGWVRQAENYYPELLNNLSSAKSPQQIFGTASKTYYPSISGLDPKNVFTVTVMPCTSKKFEADRPQMEK 160 (365)
T ss_dssp TCSCCEECCCCHHHHHHHHHHCGGGGGGBCCBCCHHHHHHHHHTTHHHHTTCCCGGGEEEEEEESCSHHHHHHTCTTSEE
T ss_pred CCCCCEEEECCHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHCCCCCCC
T ss_conf 89987598479899999999675653325678888999999999987876099911289999834643224542821245
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~dVD~VLT~~El~~~l~~~~i~~~~l~~~~~~~~~~~~s~~g~~~~~sGG~~~~~~~~~~~~~~~~~~~~~~~~~~r 240 (365)
T d3c8ya1 161 DGLRDIDAVITTRELAKMIKDAKIPFAKLEDSEADPAMGEYSGAGAIFGATGGVMEAALRSAKDFAENAELEDIEYKQVR 240 (365)
T ss_dssp TTEESCSEEEEHHHHHHHHHHTTCCGGGCCCCCCCGGGTCCCHHHHTTTSTTHHHHHHHHHHHHHHHTCCCSCCCCGGGC
T ss_pred CCCCCCCEEEEHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEECC
T ss_conf 78987488953999999999759992238886668766777866512123663999999998774368865552024306
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 g~~~i~~~~~~~~~~~~~~~~v~G~~n~~~~l~~~k~~~~~~~fvEvmACpgGCinGgGq~~~~~~~~~~~~~~~~r~~~ 320 (365)
T d3c8ya1 241 GLNGIKEAEVEINNNKYNVAVINGASNLFKFMKSGMINEKQYHFIEVMACHGGCVNGGGQPHVNPKDLEKVDIKKVRASV 320 (365)
T ss_dssp SSCSEEEEEEEETTEEEEEEEEESHHHHHHHHHTSGGGSSCCCEEEEESSTTSGGGCTTSCCCCHHHHHHSCHHHHHHHH
T ss_pred CCCCEEEEEEEECCCEEEEEEEHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 87751899997089178999960299999999987459999728998068998707998688896013268999999998
Q ss_pred --------------------------------------------E
Q ss_conf --------------------------------------------8
Q 002647 518 --------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------a 518 (897)
-
T Consensus 321 l~~~d~~~~~r~~~en~~~~~ly~~~l~~p~~~~~~~lLHT~y~~ 365 (365)
T d3c8ya1 321 LYNQDEHLSKRKSHENTALVKMYQNYFGKPGEGRAHEILHFKYKK 365 (365)
T ss_dssp HHHHHHHCSCCSGGGCHHHHHHHHHTTCSTTSHHHHHHSBCCCCC
T ss_pred HHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCC
T ss_conf 875430377788855999999999986799838999972687029
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=100.00 E-value=0 Score=27489.16 Aligned_cols=1 Identities=0% Similarity=-0.260 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~l~vGtyt~~~~i~~~~fd~~~~~l~~~~~~~~~~~~~~s~la~s~d~~~ly~~~~~~~~~~~i~~~~~~~~~~~~~ 80 (365)
T d1jofa_ 1 PLHHLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEASHP 80 (365)
T ss_dssp CEEEEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBTEEEEEEEEETTEEEEEEEEE
T ss_pred CCEEEEEEEECCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCEEEECCCCCEEEEEECCCEEEEEEECCCCEEEEEEEC
T ss_conf 91199999314999899999858889389845445168999777999489899999938947899990899769876412
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~ 160 (365)
T d1jofa_ 81 IGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLY 160 (365)
T ss_dssp CCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEE
T ss_pred CCCCCEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCCCEEEEEEECCEECCCCCCCCCCCCCCCEEEEECCCCCEEE
T ss_conf 89986789987899879999932799789986745788742068664033004764675568898115978889999899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~ 240 (365)
T d1jofa_ 161 SADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIP 240 (365)
T ss_dssp EEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSC
T ss_pred EEECCCCEEEEEECCCCCCEEECCCEEECCCCCCEEEEEECCCCCEEEEECCCCCEEEEEEECCCCCEEEEEEEEECCCC
T ss_conf 82079987999970688716652511112788740899988998669995158998999995598753778731240245
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~ 320 (365)
T d1jofa_ 241 PGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWS 320 (365)
T ss_dssp TTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTC
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCEEEEEEEECCCCCEEEEEEEEEEECCCCCCCEEEECCCC
T ss_conf 56556665444435776316998999978997135787542279999856887144676766777679986478964899
Q ss_pred --------------------------------------------E
Q ss_conf --------------------------------------------8
Q 002647 518 --------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------a 518 (897)
-
T Consensus 321 G~~l~va~~~s~~v~v~~~~~~~l~~~~~~~vp~p~~~~~~~w~~ 365 (365)
T d1jofa_ 321 DEWMAITDDQEGWLEIYRWKDEFLHRVARVRIPEPGFGMNAIWYD 365 (365)
T ss_dssp TTEEEEECSSSCEEEEEEEETTEEEEEEEEECCSTTEEEEEEEEC
T ss_pred CCEEEEEECCCCEEEEEEEECCCCCEEEEEECCCCCCCEEEEECC
T ss_conf 999999967999499999828867278999889999976879639
|
| >d1u1ha2 c.1.22.2 (A:396-760) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: UROD/MetE-like family: Cobalamin-independent methionine synthase domain: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=0 Score=27494.65 Aligned_cols=1 Identities=0% Similarity=-0.194 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~lpTT~VGS~PRp~eLk~a~e~~~~G~is~eel~~~~~~ai~~~v 80 (365)
T d1u1ha2 1 EGVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTVELRRVRREYKAKKVSEEDYVKAIKEEIKKVV 80 (365)
T ss_dssp THHHHHTTTTSSCCCSSSCCHHHHHHHHHHHSCCCSSCBBCCSBCCCCSCCC-------------CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 96899988089865267983789999999847999986232477889989999999976699999999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~Q~~aGidiItDGE~~r~d~~~~f~~~l~G~~~~~~~~~~~~~~~~~~~p~~~g~i~~~~~~~~~~~~~~~~~~~~~~k 160 (365)
T d1u1ha2 81 DLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPVIYGDVSRPKAMTVFWSAMAQSMTSRPMK 160 (365)
T ss_dssp HHHHTTCCSBBCCBCTTCSCTTHHHHTTSTTEECCSSCCEEEETTEEECCCEECSCCCCCSCSSHHHHHHHTTSCSSCBE
T ss_pred HHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEECCCEEEECCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCC
T ss_conf 99998479967639813035999999752670000464157469711066041475446676408999998850122234
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~i~gp~~l~~~~~~~~y~~~~e~~~dLa~ay~~el~~L~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~n~~~ 240 (365)
T d1u1ha2 161 GMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKGGIGVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITN 240 (365)
T ss_dssp EEEECHHHHHHTSEECSSSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECTTTTTTCCSSGGGHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 45550368853126668899899999999999999999996699389957628764321242159999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~v~~~~~~g~~~~~~~~l~~l~vd~l~le~~~~~~~~l~~~~~~~p~~K~l~~GVVd~r~~~~E~~e~v~~ri 320 (365)
T d1u1ha2 241 CGVQDSTQIHTHMCYSHFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSSEEIADRV 320 (365)
T ss_dssp TTSCTTSEEEEEESCSCCTTTHHHHHTTCCSEEEECCSSSCGGGGGGTSSSSCCCSEEEECCSCTTSSSCCCHHHHHHHH
T ss_pred HCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHH
T ss_conf 43566655899732655412478885477420001103586278887775288998899888827999879999999999
Q ss_pred --------------------------------------------E
Q ss_conf --------------------------------------------8
Q 002647 518 --------------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------------a 518 (897)
=
T Consensus 321 ~~a~~~v~~erl~lspdCGf~~l~~~~a~~KL~~lv~~a~~vr~e 365 (365)
T d1u1ha2 321 NKMLAVLEQNILWVNPDCGLKTRKYTEVKPALKNMVDAAKLIRSQ 365 (365)
T ss_dssp HHHHTTSCTTTBCBCCSSCCTTSCHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHCCHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999973885539981888999799899999999999999999659
|
| >d1w0pa3 b.68.1.1 (A:217-346,A:544-777) Vibrio cholerae sialidase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Vibrio cholerae sialidase species: Vibrio cholerae [TaxId: 666]
Probab=100.00 E-value=0 Score=27414.40 Aligned_cols=1 Identities=0% Similarity=-1.024 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~ripsl~~~~~~~g~~~a~~~~r~~~~~~~~~~~~~di~~~RS~DgGkTWs~~~~i~~~~~~~~~~~~~~p~~~ 80 (364)
T d1w0pa3 1 VIFRGPDRIPSIVASSVTPGVVTAFAEKRVGGGDPGALSNTNDIITRTSRDGGITWDTELNLTEQINVSDEFDFSDPRPI 80 (364)
T ss_dssp EEECTTCEEEEEEECSSSTTCEEEEEEEEETCSSTTCTTCEEEEEEEEESSSSSSCCCCEESSGGGCTTSCEEEEEEEEE
T ss_pred CCCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCEEE
T ss_conf 93468973547989807899899999623378998655896459999937897589998883158877786534577699
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~d~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~d~g~tw~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 160 (364)
T d1w0pa3 81 YDPSSNTVLVSYARWPTDAAQNGDRIKPWMPNGIFYSVYDVASGNWQAPIVNPGPGHGITLTRQQNISGSQNGRLIYPAI 160 (364)
T ss_dssp EETTTTEEEEEEEEEETTCCSGGGCCCTTSCCEEEEEEEETTTTEECCCEEECCSSCCEECCCCTTSTTCCTTCEEEEEE
T ss_pred EECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEE
T ss_conf 97999969999975178877566455355448579986579998512352146420003505797120351992999788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~s~d~g~tw~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~l~~~~R~~~~~~~~~~~~~~~~~~ 240 (364)
T d1w0pa3 161 VLDRFFLNVMSIYSDDGGSNWQTGSTLPIPFRWKSSSILETLEPSEADMVELQNGDLLLTARLDFNQIVNGVNYSPRQQF 240 (364)
T ss_dssp EESSSCEEEEEEEESSSSSSCEECCCCCCCEEESSSSCEEECEEEEEEEEECTTSCEEEEEEEESCCEETTEECCSEEEE
T ss_pred EECCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCEEEE
T ss_conf 50578885037885168857886455676665334544345788722699965865678998157865577688975999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~S~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~gR~~~~l~~S~D~G~TW~~~~~l 320 (364)
T d1w0pa3 241 LSKDGGITWSLLEANNANVFSNISTGTVDASITRFEQSDGSHFLLFTNPQGNPAGTNGRQNLGLWFSFDEGVTWKGPIQL 320 (364)
T ss_dssp EESSSSSSCEEEEEEEGGGSTTCCSSCCCCEEEEEECTTSCEEEEEEEECTTTTTSSSSBSEEEEEESSTTSCCEEEEEC
T ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEE
T ss_conf 97589842235546753335776788632014776057896389996787876577860125999984799679997497
Q ss_pred -------------------------------------------E
Q ss_conf -------------------------------------------8
Q 002647 518 -------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------a 518 (897)
-
T Consensus 321 ~~g~~~Ys~~~~~~~g~~~~~ye~~~~~i~~~~~~~~~l~~~~~ 364 (364)
T d1w0pa3 321 VNGASAYSDIYQLDSENAIVIVETDNSNMRILRMPITLLKQKLT 364 (364)
T ss_dssp CSSBCCSEEEEECSSSEEEEEEECGGGCEEEEEEEHHHHGGGTC
T ss_pred CCCCCCCCCEEECCCCEEEEEEECCCCCEEEEEEEHHHHHCCCC
T ss_conf 28997787327928998999999499838999987999521059
|
| >d1t64a_ c.42.1.2 (A:) Histone deacetylase 8, HDAC8 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Arginase/deacetylase superfamily: Arginase/deacetylase family: Histone deacetylase, HDAC domain: Histone deacetylase 8, HDAC8 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27419.29 Aligned_cols=1 Identities=0% Similarity=-1.822 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~pvyiy~~~~~~~~~~hP~~P~R~~~~~~ll~~~gl~~~~~~v~p~~At~~el~~vHs~~Yi~~l~~~~~~~~~~~~~~ 80 (364)
T d1t64a_ 1 LVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDS 80 (364)
T ss_dssp CCCEEECCHHHHHHHTCSSSSCCHHHHHHHHHHHTTGGGGSEEECCCCCCHHHHTTTSCHHHHHHHHHHHHHCSSCCTTT
T ss_pred CCCEEEECHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCHH
T ss_conf 98869969888416799898829999999999974996688896889799899998299999999998604026444112
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~l~~d~p~~~~~~~~~~~~aG~~l~A~~~~~~g~~~~a~~~~gg~HHA~~~~a~GFC~~NdvaiA~~~~~~~~~RV~ 160 (364)
T d1t64a_ 81 IEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERIL 160 (364)
T ss_dssp TTTTCBTTBCCCTTHHHHHHHHHHHHHHHHHHHHTTSCSEEEETTCCCTTCBTTBCBTTBSSCHHHHHHHHHTTTCSCEE
T ss_pred EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCEEE
T ss_conf 01067888887703999999985028999999875986500345754464333444454555689999999985103079
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 iiD~DvHhGnGtq~iF~~d~~V~~~SiH~~~~~~~Pgtg~~~e~G~g~g~~~~~NvPL~~g~~d~~y~~~~~~~i~~~~~ 240 (364)
T d1t64a_ 161 YVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQ 240 (364)
T ss_dssp EEECSSSCCHHHHHHHTTCSSEEEEEEEECCTTCTTCCCCTTCCCCGGGTTCEEEEEECTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 98523577776044420687544533345567778898873105876445632334125565738999999976678862
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~f~Pd~IvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~~~p~~~~~~GGY~~~~~ar~w~~~~~~l~g~~~~~~~P~ 320 (364)
T d1t64a_ 241 AFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPD 320 (364)
T ss_dssp HHCCSEEEEECCSTTBTTCTTCCCCBCHHHHHHHHHHHHTTCCEEEEECCCCCSHHHHHHHHHHHHHHHHTCCCCSBCCC
T ss_pred CCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 57998899989714778997778727998999999999835998799979888878999999999999859988866898
Q ss_pred -------------------------------------------E
Q ss_conf -------------------------------------------8
Q 002647 518 -------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------a 518 (897)
.
T Consensus 321 ~~~~~~~~p~~~~~~~~~~~~~~n~~~~~~~i~~~i~~~l~~~~ 364 (364)
T d1t64a_ 321 HEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHVV 364 (364)
T ss_dssp CTTGGGGTTTCBSCCCCCSCCCCCCHHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 50155409973136686656566999999999999999987429
|
| >d2jera1 d.126.1.6 (A:2-365) Agmatine iminohydrolase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Pentein, beta/alpha-propeller superfamily: Pentein family: Porphyromonas-type peptidylarginine deiminase domain: Agmatine iminohydrolase species: Enterococcus faecalis [TaxId: 1351]
Probab=100.00 E-value=0 Score=27417.58 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~tP~~~g~rmPaEwep~~~~~l~wP~~~~~w~~~~~~~~~~~~~i~~~ia~~e~V~v~~~~~~~~~~~~~~~~~ 80 (364)
T d2jera1 1 AKRIVGSTPKQDGFRMPGEFEPQEKVWMIWPERPDNWRDGGKPVQEAFTNVAKAISQFTPMNVVVSQQQFQNCRRQLPPE 80 (364)
T ss_dssp CCBCCSCCHHHHTCBCCCTTSCEEEEEEECCCCTTTSGGGGHHHHHHHHHHHHHHHTTSCEEEEECTTTHHHHHHHSCTT
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCC
T ss_conf 98456899111387748995500328997689985204677999999999999985887399997928999999757566
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 v~~~~~~~dD~W~RD~GPi~v~~~~g~~~~vdf~FN~wG~k~~~~~~~~~~D~~~~~~ia~~~~~~~~~~~~lvlEGG~i 160 (364)
T d2jera1 81 ITVYEMSNNDAWVRDCGPSFVINDHGEIRGVDWTFNAWGGLVDGLYFPWDQDDLVAQKICEIEHVDSYRTDDFVLEGGSF 160 (364)
T ss_dssp SEEEECCCSSSCHHHHSCEEEECTTSCEEEEEEECCTTTHHHHCSSSCCTTGGGHHHHHHHHHTCCEEEEEEEECCGGGE
T ss_pred EEEEECCCCCHHHHCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCE
T ss_conf 49999368875764551389991677567633664687655555555410278999999998366544665737748966
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~dG~GtlltTe~~ll~~nRNp~ls~~~ie~~Lk~~LGv~~viwl~~gl~~DdTdGHID~~arFi~~~~il~~~~~d~~~ 240 (364)
T d2jera1 161 HVDGQGTVLTTEMCLLSEGRNPQLSKEAIEQKLCDYLNVEKVLWLGDGIDPEETNGHVDDVACFIAPGEVACIYTEDQNS 240 (364)
T ss_dssp EECSSSEEEEEHHHHTSTTTCTTSCHHHHHHHHHHHHTCSEEEEECCCSCTTTTSSCGGGTEEEEETTEEEEECCCCTTS
T ss_pred EECCCCEEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCC
T ss_conf 97799639975455514578999899999999999869863677658755677777754448994799569984388878
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~L~~~~da~G~~~~i~~lp~P~~~~~~~~~~~~~~~~~~~~~~~g~~l~aSY~Nfli~N~~VivP~fg~ 320 (364)
T d2jera1 241 PFYEAAQDAYQRLLKMTDAKGRQLKVHKLCCPVKNVTIKGSFKIDFVEGTMPREDGDICIASYMNFLITNDGVIVPQYGD 320 (364)
T ss_dssp TTHHHHHHHHHHHHTCBCTTCCBCEEEEECCCSSCEECCTTSCCCCCTTSCCCCTTCEECCCTTCCEEETTEEEEEECSC
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCEEEEECCCC
T ss_conf 35799999999997656534898558862689742333333344534575435689886202578999999999902798
Q ss_pred -------------------------------------------E
Q ss_conf -------------------------------------------8
Q 002647 518 -------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------a 518 (897)
-
T Consensus 321 ~~D~~Al~~l~~~fP~r~Vv~I~~~~i~~~gG~iHCiT~q~P~~ 364 (364)
T d2jera1 321 ENDRLALEQVQTMFPDKKIVGVNTVEVVYGGGNIHXITQQEPKR 364 (364)
T ss_dssp TTHHHHHHHHHHHSTTSEEEEEECHHHHTTTCCTGGGCEEEECC
T ss_pred HHHHHHHHHHHHHCCCCEEEEEECHHHHHCCCCCCHHHHCCCCC
T ss_conf 77899999999888899799971089875698014463127999
|
| >d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Extended AAA-ATPase domain domain: ClpX species: Helicobacter pylori [TaxId: 210]
Probab=100.00 E-value=0 Score=27417.30 Aligned_cols=1 Identities=0% Similarity=-0.560 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~~~~tP~ei~~~L~~~ViGQd~Akkava~Avrn~~rR~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~niLfiGPTGvG 80 (364)
T d1um8a_ 1 LLSYIPAPKELKAVLDNYVIGQEQAKKVFSVAVYNHYKRLSFKEKLKKQDNQDSNVELEHLEEVELSKSNILLIGPTGSG 80 (364)
T ss_dssp CCSCCCCHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHTTCCCCCEEEECCTTSS
T ss_pred CCCCCCCHHHHHHHHCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC
T ss_conf 97779887999999589623808999999999998998887788764044443311112233456787532441899863
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 KTElAk~LA~~~~~~~ir~D~s~~~e~gyvg~dv~~~i~~l~~~~~~~v~~~~~~iv~lDEieK~~~~s~~~~~~~d~a~ 160 (364)
T d1um8a_ 81 KTLMAQTLAKHLDIPIAISDATSLTEAGYVGEDVENILTRLLQASDWNVQKAQKGIVFIDEIDKISRLSENRSITRDVSG 160 (364)
T ss_dssp HHHHHHHHHHHTTCCEEEEEGGGCC--------CTHHHHHHHHHTTTCHHHHTTSEEEEETGGGC--------------C
T ss_pred HHHHHHHHHHHCCCCEEEHHHHHCCCCHHHHHHHCCCHHHHHHHCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 78999999864435331112220144316676312103445420245899865463010166653134544555512214
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~V~~~lLqild~~~~~~~~~~gr~~~~~~~i~i~t~~i~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (364)
T d1um8a_ 161 EGVQQALLKIVEGSLVNIPPKGGRKHPEGNFIQIDTSDILFICAGAFDGLAEIIKKRTTQNVLGFTQEKMSKKEQEAILH 240 (364)
T ss_dssp HHHHHHHHHHHHCCEEC---------------CEECTTCEEEEEECCTTHHHHTTTSCSSCCCSCCCSSCCTTTTTTSGG
T ss_pred HHHHHHHHHHHCCCEECCCCCCCCCCCCCEEEEEEEHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHC
T ss_conf 38898645540586122587778767764168996113455411131014566543014454310001100124666530
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~f~PEf~gRi~~iv~f~~L~~~~l~~Il~~~~~~l~kq~~~~l~~~gi~L~~td~a~~~la~~g~d~~~G 320 (364)
T d1um8a_ 241 LVQTHDLVTYGLIPELIGRLPVLSTLDSISLEAMVDILQKPKNALIKQYQQLFKMDEVDLIFEEEAIKEIAQLALERKTG 320 (364)
T ss_dssp GCCHHHHHHTTCCHHHHTTCCEEEECCCCCHHHHHHHHHSSTTCHHHHHHHHHHTTTCEEEECHHHHHHHHHHHHHTTCT
T ss_pred CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHCCCCCCC
T ss_conf 24578776530079999872301557402099999999879999999999998757927999899999999956587778
Q ss_pred -------------------------------------------E
Q ss_conf -------------------------------------------8
Q 002647 518 -------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------a 518 (897)
+
T Consensus 321 AR~L~riie~~l~~~~f~~p~~~~~~v~I~~~~V~~~~~~~~i~ 364 (364)
T d1um8a_ 321 ARGLRAIIEDFCLDIMFDLPKLKGSEVRITKDCVLKQAEPLIIA 364 (364)
T ss_dssp GGGHHHHHHHHHHHHHHTGGGGTTSEEEECHHHHTTSSCCEEEC
T ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHCCCCCCEEEC
T ss_conf 36789999999999855587789999997778867998881439
|
| >d1icpa_ c.1.4.1 (A:) 12-oxophytodienoate reductase (OPR, OYE homolog) {Tomato (Lycopersicon esculentum), OPR1 [TaxId: 4081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: FMN-linked oxidoreductases family: FMN-linked oxidoreductases domain: 12-oxophytodienoate reductase (OPR, OYE homolog) species: Tomato (Lycopersicon esculentum), OPR1 [TaxId: 4081]
Probab=100.00 E-value=0 Score=27416.93 Aligned_cols=1 Identities=0% Similarity=0.238 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~~~pLFsP~~ig~~~LkNRiv~apm~~~~a~~g~p~~~~~~~y~~rA~gGgliite~~~V~~~g~~~~~~~~l~~d~~ 80 (364)
T d1icpa_ 1 QVDKIPLMSPCKMGKFELCHRVVLAPLTRQRSYGYIPQPHAILHYSQRSTNGGLLIGEATVISETGIGYKDVPGIWTKEQ 80 (364)
T ss_dssp CCCCCGGGSCEEETTEEESCSEEECCCCCCCCGGGSCCHHHHHHHHHTCCTTCEEECCCEECSGGGCCSTTCCBCSSHHH
T ss_pred CCCCCCCCCCCEECCEEECCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCEEECCCCCCCCCCCEECHHHH
T ss_conf 99898899972489999678427524489858999797999999999983964999710788873357999853134344
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 i~~~k~l~~~ih~~g~~~~~QL~H~Gr~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~ii~~f 160 (364)
T d1icpa_ 81 VEAWKPIVDAVHAKGGIFFCQIWHVGRVSNKDFQPNGEDPISCTDRGLTPQIMSNGIDIAHFTRPRRLTTDEIPQIVNEF 160 (364)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECCTTSSCTTTSGGGCCCEESSSCCCCCEECTTSSCEECCCCCEECCTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 45677888886237882577640477554554445788875323456531112346565678887311066799999988
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~aA~rA~~AGfDgVeIH~ahGyLl~QFlSp~tN~RtDeYGGsleNR~Rf~~Eii~aIr~~~g~~~i~~r~s~~~~~~~~ 240 (364)
T d1icpa_ 161 RVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYNEA 240 (364)
T ss_dssp HHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTC
T ss_pred HHHHHHHHHHCCCEEEEECCCCCHHHCEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCC
T ss_conf 99999999839986898305762131200110077675444204320167898765420124886466886043224677
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 g~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~vi~~g~~~~~~ae~~l~~g~aD~V~~ 320 (364)
T d1icpa_ 241 GDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAYKGTFIVAGGYDREDGNRALIEDRADLVAY 320 (364)
T ss_dssp CCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHCCSCEEEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCEEHH
T ss_conf 67516777889987752032245665158655455455447889999986478789978989999999998699765056
Q ss_pred -------------------------------------------E
Q ss_conf -------------------------------------------8
Q 002647 518 -------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------a 518 (897)
-
T Consensus 321 gR~~iadPd~~~k~~~g~pi~~~~~~~~~~~~~~~g~~~~p~~~ 364 (364)
T d1icpa_ 321 GRLFISNPDLPKRFELNAPLNKYNRDTFYTSDPIVGYTDYPFLE 364 (364)
T ss_dssp SHHHHHCTTHHHHHHHTCCCCCCCGGGSSCCCSSTTTTCSCCCC
T ss_pred HHHHHHCCCHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCC
T ss_conf 79999790499999709998988611342799998848798889
|
| >d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin heavy chain-like protein species: Potato (Solanum tuberosum) [TaxId: 4113]
Probab=100.00 E-value=0 Score=27416.78 Aligned_cols=1 Identities=0% Similarity=0.636 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 rIkV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~f~FD~vf~~~~~q~~vy~~v~~lv~~~l~G~n~~i~a 80 (364)
T d1sdma_ 1 KIRVYCRLRPLCEKEIIAKERNAIRSVDEFTVEHLWKDDKAKQHMYDRVFDGNATQDDVFEDTKYLVQSAVDGYNVCIFA 80 (364)
T ss_dssp CCEEEEEECCCCHHHHHTTCCBCEEECSTTEEEEECSSSSEEEEECSEEECTTCCHHHHHHTTTHHHHHHHTTCEEEEEE
T ss_pred CEEEEEECCCCCHHHCCCCCCCEEEECCCCEEEECCCCCCCEEEECCEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 96999992789936622589875996799758735789985477788564999998999998999999996698503552
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 YGqTGSGKTyTm~G~~~~~Giipr~~~~lf~~i~~~~~~~~~~v~~S~~EIyne~i~DLL~~~~~~~~~l~~~~~~~~~~ 160 (364)
T d1sdma_ 81 YGQTGSGKTFTIYGADSNPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQAKRLKLDIKKDSKGMV 160 (364)
T ss_dssp ECSTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEESSSCEEETTSCTTSCCCCCEEEECTTSCE
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCC
T ss_conf 23478776201656766551367899998865531034655369999888723632233576545554433133146760
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~v~~l~~~~v~s~~~~~~~l~~g~~~R~~~~t~~n~~ssRsH~i~~i~v~~~~~~~~~~~~~kl~~vDLAGsEr~~~~~~ 240 (364)
T d1sdma_ 161 SVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQTQAIARGKLSFVDLAGSERVKKSGS 240 (364)
T ss_dssp EEETCCCEEECSHHHHHHHHHHHHHHHCCCSSCTTCHHHHSEEEEEEEEEEEETTTCCEEEEEEEEEECCCCSCCCC---
T ss_pred CCCCCEEEEECCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEEEEEECHHHCCCCCCCCC
T ss_conf 20353000117788978986406600044534354103336359999999703676503567998404100352001466
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~g~~~~E~~~iN~SL~~L~~vi~aL~~~~~~ipyR~SkLT~lL~d~Lggns~t~~I~~isp~~~~~~eTl~TL~fa~~ak 320 (364)
T d1sdma_ 241 AGNQLKEAQSINKSLSALGDVISALSSGNQHIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLDETHNSLTYASRVR 320 (364)
T ss_dssp ------CCCTTCHHHHHHHHHHHHHHHTCSCCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHT
T ss_pred CCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHH
T ss_conf 67502332335643206899999997499757730112138878634999509999996987001899999999999984
Q ss_pred -------------------------------------------E
Q ss_conf -------------------------------------------8
Q 002647 518 -------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------a 518 (897)
-
T Consensus 321 ~i~n~p~~n~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~l~~e 364 (364)
T d1sdma_ 321 SIVNDPSKNVSSKEVARLKKLVSYWKEQAGRKGDDEELEEIQDE 364 (364)
T ss_dssp TCCCCCCCCEECHHHHHHHTTTTCC-----------CCEECCCC
T ss_pred HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
T ss_conf 20667835579899999999999999998744027799997559
|
| >d1kbla1 c.1.12.2 (A:510-873) Pyruvate phosphate dikinase, C-terminal domain {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Phosphoenolpyruvate/pyruvate domain family: Pyruvate phosphate dikinase, C-terminal domain domain: Pyruvate phosphate dikinase, C-terminal domain species: Clostridium symbiosum [TaxId: 1512]
Probab=100.00 E-value=0 Score=27415.07 Aligned_cols=1 Identities=0% Similarity=-0.659 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~waD~~r~~~v~aN~~~~~d~~~A~~~GAdGIGL~RTEflfl~~~~~p~~~~~~~~~~~e~~~~ 80 (364)
T d1kbla1 1 IETQEASVSGSFERIMVWADKFRTLKVRTNADTPEDTLNAVKLGAEGIGLCRTEHMFFEADRIMKIRKMILSDSVEAREE 80 (364)
T ss_dssp CCEECCCCCHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHTTCCSEEEECCTHHHHSHHHHHHHHHHHHCCSHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHH
T ss_conf 99768887448999999877467107998289999999999769971548888998727876540566663367266799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~q~~~y~~i~~~~~g~pvtiRtlD~g~dk~~p~~~~~~~~~~~~lg~~~~~~~~~~~~~~E~NP~LG~RGiR~ 160 (364)
T d1kbla1 81 ALNELIPFQKGDFKAMYKALEGRPMTVRYLDPPLHEFVPHTEEEQAELAKNMGLTLAEVKAKVDELHEFNPMMGHRGCRL 160 (364)
T ss_dssp HHHTTHHHHHHHHHHHHHHHTTCCEEEECCCSCGGGGSCCSHHHHHHHHHHHTCCHHHHHHHHHHHCCSCGGGSSCTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 99998887877899999860898679851568864467873156899998739987887665424455784224433213
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~l~~p~lf~~QlrAilrA~~~~~~~~g~~~~~~Im~Pmv~~~~E~~~~k~~i~~~~~~l~~~~~~~~~~~iG~MiE~Psa 240 (364)
T d1kbla1 161 AVTYPEIAKMQTRAVMEAAIEVKEETGIDIVPEIMIPLVGEKKELKFVKDVVVEVAEQVKKEKGSDMQYHIGTMIEIPRA 240 (364)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHH
T ss_pred EEECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHH
T ss_conf 42665236888999999999978843875431441131304999999998888899997530387766148775011599
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 al~~d~~~~~vDF~SIGTNDLtQy~la~dRd~~~~~l~~y~~~~i~~~dP~~~~~~~av~~lI~~~~~~~~~~~~~i~vs 320 (364)
T d1kbla1 241 ALTADAIAEEAEFFSFGTNDLTQMTFGFSRDDAGKFLDSYYKAKIYESDPFARLDQTGVGQLVEMAVKKGRQTRPGLKCG 320 (364)
T ss_dssp HHTHHHHTTTCSEEEECHHHHHHHHHTCCHHHHHHHHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHCTTCEEE
T ss_pred HHHHHHHHHHCCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 97189987327679963306878887433253255665554420022375104406999999999999999737998699
Q ss_pred -------------------------------------------E
Q ss_conf -------------------------------------------8
Q 002647 518 -------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------a 518 (897)
-
T Consensus 321 iCGE~asdp~~~~~L~~lGi~~lS~sp~~vp~~r~a~aqa~~~~ 364 (364)
T d1kbla1 321 ICGEHGGDPSSVEFCHKVGLNYVSCSPFRVPIARLAAAQAALNN 364 (364)
T ss_dssp ECSGGGGSHHHHHHHHHTTCSEEEECGGGHHHHHHHHHHHHHHC
T ss_pred EECCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHCC
T ss_conf 71731159999999998699989978046699999999987439
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=0 Score=27414.13 Aligned_cols=1 Identities=0% Similarity=-1.191 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 lslddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~ 80 (364)
T d1omwa3 1 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD 80 (364)
T ss_dssp CCSTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS
T ss_pred CCHHHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECC
T ss_conf 97776851018842889099999999999799999984587542667999999999999985089985889999999899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~ 160 (364)
T d1omwa3 81 KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK 160 (364)
T ss_dssp EEEEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEECSSS
T ss_pred EEEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEECCCCCEEEEEECEEEECCCC
T ss_conf 88999991489838999873255327899999999999999999779622044422167858896798220102333788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li 240 (364)
T d1omwa3 161 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLL 240 (364)
T ss_dssp CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSCCCCCCSSSCHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
T ss_conf 64331134554216876038999844104677899999985999888899899999998604688878877899999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i~~~~~~~~~~~~p~~p~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 320 (364)
T d1omwa3 241 EGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIKLLDSDQEL 320 (364)
T ss_dssp HHHTCSSTTTSTTTSSSTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCC--------------------CCCCSSSSGG
T ss_pred HHHCCCCHHHHCCCCCCCHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHH
T ss_conf 99856698880887435799997491023789879962889959379988888687454665881011379889757899
Q ss_pred -------------------------------------------E
Q ss_conf -------------------------------------------8
Q 002647 518 -------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~q~~~ 364 (364)
T d1omwa3 321 YRNFPLTISERWQQEVAETVFDTINAETDRLEARKKTKNKQLGH 364 (364)
T ss_dssp GTTCCEECHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC
T ss_conf 84687657637788888876644526578888642271633389
|
| >d1kq3a_ e.22.1.2 (A:) Glycerol dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Dehydroquinate synthase-like superfamily: Dehydroquinate synthase-like family: Iron-containing alcohol dehydrogenase domain: Glycerol dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=27414.10 Aligned_cols=1 Identities=0% Similarity=-1.257 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~m~~~~~~P~rii~G~gal~~l~~~l~~~g~r~lvVt~~~~~~~~~~~~v~~~L~~~~i~~~v~~~~~~~~~i~~~~~~~ 80 (364)
T d1kq3a_ 1 HMITTTIFPGRYVQGAGAINILEEELSRFGERAFVVIDDFVDKNVLGENFFSSFTKVRVNKQIFGGECSDEEIERLSGLV 80 (364)
T ss_dssp CCCBCCCCCSEEEEETTGGGGHHHHHHTTCSEEEEEECHHHHHHTTCTTGGGGCSSSEEEEEECCSSCBHHHHHHHHTTC
T ss_pred CCCCCEECCCCEEEECCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHH
T ss_conf 99755778978798059999999999973993899989865564799999998886698699618989807999999975
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~D~IIavGGGs~~D~aK~ia~~~~~P~I~IPTTa~tgse~t~~avi~~~~~~~k~~~~~~~~P~~viiDp~l~~t~P 160 (364)
T d1kq3a_ 81 EEETDVVVGIGGGKTLDTAKAVAYKLKKPVVIVPTIASTDAPCSALSVIYTPNGEFKRYLFLPRNPDVVLVDTEIVAKAP 160 (364)
T ss_dssp CTTCCEEEEEESHHHHHHHHHHHHHTTCCEEEEESSCCCSCTTSSEEEEECTTSCEEEEEECSSCCSEEEEEHHHHHHSC
T ss_pred HCCCCEEEEECCCCCCEEECCCCCCCCCCCEEECCCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCEEEECCHHHHHHH
T ss_conf 20576899813675410101223334210124225433332446513786326775311200244533887716666435
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~Dal~h~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 240 (364)
T d1kq3a_ 161 ARFLVAGMGDALATWFEAESCKQKYAPNMTGRLGSMTAYALARLCYETLLEYGVLAKRSVEEKSVTPALEKIVEANTLLS 240 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCBCTTSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88886217888653777765554214001015555568999999999999988887777640337999999999877875
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 g~~~~~~~~~~~H~~~~~~~~~~~~~~~~HG~~va~~~~~~~~~~~~~~~~~~~i~~l~~~lglP~~L~elGi~~~~~~~ 320 (364)
T d1kq3a_ 241 GLGFESGGLAAAHAIHNGLTVLENTHKYLHGEKVAIGVLASLFLTDKPRKMIEEVYSFCEEVGLPTTLAEIGLDGVSDED 320 (364)
T ss_dssp HHHHHHHCCCHHHHHHHHHTTSGGGTTSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHTCCCSGGGGTCTTCCHHH
T ss_pred HCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHH
T ss_conf 34213445566520002254523764202107899889999875406799999999999985999989992999998999
Q ss_pred -------------------------------------------E
Q ss_conf -------------------------------------------8
Q 002647 518 -------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------a 518 (897)
-
T Consensus 321 l~~ia~~a~~~~~~~~~~P~~~t~edi~~il~~A~~~~~~~~~~ 364 (364)
T d1kq3a_ 321 LMKVAEKACDKNETIHNEPQPVTSKDVFFALKAADRYGRMRKNL 364 (364)
T ss_dssp HHHHHHHHTCTTSGGGGSSSCCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999998727775658996899999999999999998875579
|
| >d1oc7a_ c.6.1.1 (A:) Cellobiohydrolase II (Cel6) {Humicola insolens, Cel6a [TaxId: 34413]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: 7-stranded beta/alpha barrel superfamily: Glycosyl hydrolases family 6, cellulases family: Glycosyl hydrolases family 6, cellulases domain: Cellobiohydrolase II (Cel6) species: Humicola insolens, Cel6a [TaxId: 34413]
Probab=100.00 E-value=0 Score=27412.43 Aligned_cols=1 Identities=0% Similarity=-1.922 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~p~~gNPf~g~~~yvnP~~~~~v~~~a~~~~~d~~~~a~~~~va~~Pta~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 80 (364)
T d1oc7a_ 1 APYNGNPFEGVQLWANNYYRSEVHTLAIPQITDPALRAAASAVAEVPSFQWLDRNVTVDTLLVQTLSEIREANQAGANPQ 80 (364)
T ss_dssp CCCCSCTTTTCEECCCHHHHHHHHHTTGGGCCCHHHHHHHHHHTTSCCCEEECSGGGTTTHHHHHHHHHHHHHHTTCSSC
T ss_pred CCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 99789988898332474077899999873468988999999985378279711477777522778999999987214788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~lVvY~iP~RDC~a~as~Ge~~~~~~g~~~y~~Yid~I~~~~~~~~~~~~vvIlEPDsL~nlvt~~~~~~c~~~~~~ 160 (364)
T d1oc7a_ 81 YAAQIVVYDLPDRDCAAAASNGEWAIANNGVNNYKAYINRIREILISFSDVRTILVIEPDSLANMVTNMNVPKCSGAAST 160 (364)
T ss_dssp EEEEEEECCCTTCSTTSSSCCCCCCGGGTHHHHHHHHHHHHHHHHHHTTTSCEEEEECTTSTHHHHHCTTSHHHHHHHHH
T ss_pred CEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHCCCCCHHHHHHHHH
T ss_conf 51389994799987320004897545766468899999999999975688634999777622223306880666778999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~i~yAi~~l~~pnv~vYlDaGhsgWLgw~~n~~~~a~~~a~~l~~ag~~~~vrGFatNvsNy~~~~~~~~~~~~~~n 240 (364)
T d1oc7a_ 161 YRELTIYALKQLDLPHVAMYMDAGHAGWLGWPANIQPAAELFAKIYEDAGKPRAVRGLATNVANYNAWSVSSPPPYTSPN 240 (364)
T ss_dssp HHHHHHHHHHHTCCTTEEEEEECCCTTTTTSHHHHHHHHHHHHHHHHHTTCCTTEEEEEESTTCCCCSSCSSCCGGGTTC
T ss_pred HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC
T ss_conf 99999999997169973899978877666760001268999999998647864343378704477666667887544578
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~dE~~y~~~l~~~l~~~G~~~~fvIDTsRNG~gp~~~~~~g~WCN~~GaglG~rPt~~t~~~~vDA~lWIKpPGESDG 320 (364)
T d1oc7a_ 241 PNYDEKHYIEAFRPLLEARGFPAQFIVDQGRSGKQPTGQKEWGHWCNAIGTGFGMRPTANTGHQYVDAFVWVKPGGECNG 320 (364)
T ss_dssp SCCSHHHHHHHHHHHHHHTTCCCEEEEECTTCSSSSCSCSSTTCCSSBSSCCCCSCCBSCCCCTTEEEEECCSCTTBCSC
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC
T ss_conf 76259999999999997458887448870467889877778888779999826889978999877677887588847788
Q ss_pred -------------------------------------------E
Q ss_conf -------------------------------------------8
Q 002647 518 -------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~~~D~~C~~~~a~~~aP~AG~Wf~~~f~~Lv~NA~P~f 364 (364)
T d1oc7a_ 321 TSDTTAARYDYHCGLEDALKPAPEAGQWFNEYFIQLLRNANPPF 364 (364)
T ss_dssp CCCTTSTTCCGGGGSTTBCSSCCSTTSBCHHHHHHHHHTCSSCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf 88876666676667655789998677752999999997268999
|
| >d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase 10c species: Cellvibrio japonicus [TaxId: 155077]
Probab=100.00 E-value=0 Score=27412.27 Aligned_cols=1 Identities=0% Similarity=-0.660 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~l~~~~~~~f~~G~av~~~~~~~~~~~~~~~~~~~~~~~fn~~t~eN~mKW~~iep~~G~~nf~~~D~~v~~a 80 (364)
T d1us3a2 1 AYSANVDHLRDLAPSDFPIGVAVSNTDSATYNLLTNSREQAVVKKHFNHLTAGNIMKMSYMQPTEGNFNFTNADAFVDWA 80 (364)
T ss_dssp CCCCCCSCGGGGCSSSCCEEEEEBCTTCTTTBTTTCHHHHHHHHHHCSEEEESSTTSHHHHCSBTTBCCCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 97564358999703689478885276555422246778999999768823165467768855889836838999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~gi~v~GH~lvW~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~vv~ry~~~G~I~~WDVvNEp~~~~~~~~~~~~~~~~ 160 (364)
T d1us3a2 81 TENNMTVHGHALVWHSDYQVPNFMKNWAGSAEDFLAALDTHITTIVDHYEAKGNLVSWDVVNEAIDDNSPANFRTTDSAF 160 (364)
T ss_dssp HHTTCEEEEEEEEECCGGGSCHHHHTCCSCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCBCSSSSCCBCCTTCHH
T ss_pred HHCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCHH
T ss_conf 98889899950687865578643235786579999999999999987524688357999860444578876556666437
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~g~~~~~i~~Af~~Ar~~~p~a~l~~ndy~~~~~~~~~~~~~~~v~~l~~~g~~idgiG~Q~H~~~~~p~~~~i~~~ 240 (364)
T d1us3a2 161 YVKSGNSSVYIERAFQTARAADPAVILYYNDYNIEQNNAKTTKMVDMVKDFQARSIPIDGVGFQMHVCMNYPSIANISAA 240 (364)
T ss_dssp HHHTTSCSHHHHHHHHHHHHHCTTSEEEEEESSTTSCSHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHH
T ss_conf 77708833999999999998640343211565334663134678999999986899655532410025799998999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 l~~~~~~g~~I~iTEldi~~~~~~~~~~~~~~~~~~~~~~~~~QA~~~~~~~~~~~~~~~~~~~~~vt~Wg~~D~~sW~~ 320 (364)
T d1us3a2 241 MKKVVDLGLLVKITELDVAVNQPHCDAYPANKINPLTEAAQLAQKKRYCDVVKAYLDTVPVNQRGGISVWGTTDANTWLD 320 (364)
T ss_dssp HHHHHTTTCEEEEEEEEEESSCTTSTTTTTTCCCSCCHHHHHHHHHHHHHHHHHHHHHSCGGGEEEEEESCSBGGGCHHH
T ss_pred HHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCC
T ss_conf 99998549905887404741467665444444688875899999999999999998455623455699815874876556
Q ss_pred -------------------------------------------E
Q ss_conf -------------------------------------------8
Q 002647 518 -------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~~~~~~~~~lL~d~d~~pKPAy~av~~~L~g~~~~~~~ 364 (364)
T d1us3a2 321 GLYREQFEDEKISWPLLFDNNYNDKPALRGFADALIGTQCTNTH 364 (364)
T ss_dssp HHTTTTTTTCCCCCCSSBCTTSCBCHHHHHHHHHHHTCCCCSCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
T ss_conf 87777666666687866889989988999999997799887889
|
| >d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: SepSecS-like domain: Selenocysteinyl-tRNA synthase (SepSecS) species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=100.00 E-value=0 Score=27410.85 Aligned_cols=1 Identities=0% Similarity=0.039 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~n~~~~~~~~~l~~~a~~a~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~A~~~g~e~~~~t~g~t~a~~~~~~ 80 (364)
T d2e7ja1 1 DFINIDPLQTGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGCDVARVTNGAREAKFAVMH 80 (364)
T ss_dssp CCEECCHHHHTCCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTSSEEEEESSHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHH
T ss_conf 97566841027968999999999984477510034666411135708999999999998695979997969999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 al~~~gd~Vi~~~~~h~s~~~~~~~~g~~v~~v~~~~~~~~~i~~~~l~~~i~~~~k~~~~~lv~i~~~~n~tG~~~~l~ 160 (364)
T d2e7ja1 81 SLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPDVK 160 (364)
T ss_dssp HHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCCHH
T ss_pred HHHCCCCEEEEECCCCCCCCHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEECCH
T ss_conf 98679967974046431110688851211798630356433257999976655410467716999605779984552311
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~I~~ia~~~~i~livD~a~~~g~~~~~~~~~g~D~~~~S~~K~~~~~g~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (364)
T d2e7ja1 161 KIAKVCSEYDVPLLVNGAYAIGRMPVSLKEIGADFIVGSGHKSMAASGPIGVMGMKEEWAEIVLRRSEKYKNKEVELLGC 240 (364)
T ss_dssp HHHHHHHTTTCCEEEECTTTBTTBCCCHHHHTCSEEEEEHHHHSSCCSSCEEEEECTTTTTTTTCBCSSCTTSBGGGTTC
T ss_pred HHEECCCCCCCHHHCCCCCHHHHHHHCCCCCCCCEEEECCCCCCCCCCCEEEEEECHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 00000023321111144323444320133332213530331012788888999988799999985156657663333310
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (364)
T d2e7ja1 241 TARGATIITLMASFPHVRERIKRWDEEVEKARRFAAEMEKLGIKQLGDNPHNHDLMFFHAEVLYEISKKAKGGRFFLYRE 320 (364)
T ss_dssp CCCSHHHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHTTCEEESSSSCCSSEEEEECHHHHHHHHHSSSGGGHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEEECCCHHHHHHHHHCCCHHHHHH
T ss_conf 03235799999999988999999987777788999999975986457888876559983541477789753256677988
Q ss_pred -------------------------------------------E
Q ss_conf -------------------------------------------8
Q 002647 518 -------------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------------a 518 (897)
-
T Consensus 321 l~~~~~~~~~~g~~~~~~~~~~~~t~edid~~~~~l~ei~~~ys 364 (364)
T d2e7ja1 321 LKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEKYS 364 (364)
T ss_dssp HHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHHCC
T ss_pred HHHCCCCEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 87658713457876269980567999999999999999999759
|
| >d1m7va_ d.174.1.1 (A:) Nitric oxide (NO) synthase oxygenase domain {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Nitric oxide (NO) synthase oxygenase domain superfamily: Nitric oxide (NO) synthase oxygenase domain family: Nitric oxide (NO) synthase oxygenase domain domain: Nitric oxide (NO) synthase oxygenase domain species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=0 Score=27347.73 Aligned_cols=1 Identities=0% Similarity=-0.592 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~s~~e~l~~eA~~Fi~~~y~e~~~~~~~~~Rl~ev~~eI~~tGtY~~T~eEL~~GAk~AWRNs~RCIGRl~W~~L~V~D~ 80 (363)
T d1m7va_ 1 GSHMEILWNEAKAFIAECYQELGKEEEVKDRLDSIKSEIDRTGSYVHTKEELEHGAKMAWRNSNRCIGRLFWNSLNVIDR 80 (363)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHHHHHHTSSCCCCHHHHHHHHHHHHHTCTTCSCGGGGGGCEEEEC
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEC
T ss_conf 97678999999999999998648632489999999999974177438999998878998714552323002275725656
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 R~v~t~~~m~eal~~Hl~~AtN~G~Ir~~ITVF~p~~~~~~~~RIwN~QLirYAGY~~dg~iiGDP~~vefT~~c~~lGW 160 (363)
T d1m7va_ 81 RDVRTKEDVRDALFHHIETATNNGKIRPSITIFPPEEKGEKQVEIWNHQLIRYAGYESDGERIGDPASRSLTAACEQLGW 160 (363)
T ss_dssp TTCCSHHHHHHHHHHHHHHHHGGGSCCCEEEECCCCSSSCCSEEECCSBSSCBCEEC--CCCEECGGGHHHHHHHHTTTC
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEECHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf 68999899999999999997079987623898078778999865644888866175889983689526899999997599
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~t~FDvLPlviq~~g~~~P~~feiP~~lvlEV~i~HP~~~~f~~LgLkWyavP~iS~M~L~iGGi~y~aaPFNGWYM 240 (363)
T d1m7va_ 161 RGERTDFDLLPLIFRMRGDEQPVWYELPRSLVIEVPITHPDIEAFSDLELKWYGVPIISDMKLEVGGIHYNAAPFNGWYM 240 (363)
T ss_dssp CCCCCTTCBCCEEEEETTCSSCEEECCCTTTCCEEECCCSSCGGGGGGCCEEESCCEECSCEEEETTEEESCCCEECCEE
T ss_pred CCCCCCCCEEEEEEEECCCCCCEEECCCHHHEEEECCCCCCCHHHHHCCCCEEECHHHCCCHHHCCCEEECCCCCCCCEE
T ss_conf 99899888403899967999981331887783675157989755776698632032332240310888542456343422
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~TEIgaRnl~D~~RYn~L~~VA~~mGlDt~~~~sLWkDrAlvElN~AVLhSF~~~gVtivDHHtas~~F~~f~~~E~~~~ 320 (363)
T d1m7va_ 241 GTEIGARNLADEKRYDKLKKVASVIGISTNYNTDLWKDQALVELNKAVLYSYKKQGVSIVDHHTAASQFKRFEEQEEEAG 320 (363)
T ss_dssp HHHHHTTTTTCTTTTCCHHHHHHHTTCCCSCGGGTHHHHHHHHHHHHHHHHHHHHTCCEECHHHHHHHHHHHHHHHHHTT
T ss_pred EHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHC
T ss_conf 00230244555777774799999948888997215778899999999999999879647052788999999999999818
Q ss_pred ------------------------------------------E
Q ss_conf ------------------------------------------8
Q 002647 518 ------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------a 518 (897)
-
T Consensus 321 r~~~gdW~WlvPP~S~s~tpvfH~~~~~~~~~Pnf~yq~~pw~ 363 (363)
T d1m7va_ 321 RKLTGDWTWLIPPISPAATHIFHRSYDNSIVKPNYFYQDKPYE 363 (363)
T ss_dssp CCCBCCHHHHSCSSSGGGSGGGGSCCBCCCCSSEEECCCCTTC
T ss_pred CCCCCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 9999984377788864344277776544445887502788899
|
| >d1zaia1 c.1.10.1 (A:1-363) Fructose-1,6-bisphosphate aldolase {Rabbit (Oryctolagus cuniculus), muscle isozyme [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Aldolase family: Class I aldolase domain: Fructose-1,6-bisphosphate aldolase species: Rabbit (Oryctolagus cuniculus), muscle isozyme [TaxId: 9986]
Probab=100.00 E-value=0 Score=27344.37 Aligned_cols=1 Identities=0% Similarity=-1.623 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~e~~~eL~~~a~~~~~~GKGilAADeS~gT~~Krl~~igventeenr~~yR~~lftsp~f~~~~IsGvILfe 80 (363)
T d1zaia1 1 PHSHPALTPEQKKELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFH 80 (363)
T ss_dssp CCCCCSSCHHHHHHHHHHHHHHTCTTCEEEEECCCHHHHHHHHHTTTCCCCHHHHHHHHHHHHTCCGGGTTTEEEEEECH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHCCEEEEECCH
T ss_conf 99877689999999999999980589869982689983777898769999778999999987148512205446897648
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 eTl~q~~~~g~~~~~ll~~kGIvPgIKVDkGl~~l~~~~ge~~t~gLd~L~~rl~~y~~~Ga~faKwRsVi~i~~~~ps~ 160 (363)
T d1zaia1 81 ETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSA 160 (363)
T ss_dssp HHHTCBCTTSCBHHHHHHHTTCEEEEECCCCEEECTTSSSCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCSSSCSCH
T ss_pred HHHHHHCCCCCCCCHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCC
T ss_conf 87511225998622566515854467347653336788644135662239999999986686513112102235677740
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~I~~na~~laryA~i~q~~GLVPIVEPEVlidg~h~~e~~~~vt~~vl~~v~~~l~~~~V~leg~lLKpnMv~~g~~~~ 240 (363)
T d1zaia1 161 LAIMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTLLKPNMVTPGHACT 240 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCCCCCCCTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 24899899999999999865842002353442476315788999999999999876412323467501355666754355
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~va~~Tv~~l~~~vp~~VpgIvfLSGGqS~eeAt~~LnamNk~~~~~pW~lsfSfgRALQ~~~lk~W~g~~~n~ 320 (363)
T d1zaia1 241 QKYSHEEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENL 320 (363)
T ss_dssp SCCCHHHHHHHHHHHHHTTSCTTSCEEEECCTTCCHHHHHHHHHHHHHCSSCCCSEEEEEESHHHHHHHHHHHTTCGGGH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCH
T ss_conf 54886675566555654058977772110578765889999999986036899976999751766489999847882258
Q ss_pred ------------------------------------------E
Q ss_conf ------------------------------------------8
Q 002647 518 ------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------a 518 (897)
-
T Consensus 321 ~aaQ~~~~~ra~~Ns~A~~G~y~~~~e~~~~~~~~l~v~~~~y 363 (363)
T d1zaia1 321 KAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFISNHAY 363 (363)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCCSSSCCCCCCCCCCSCCGGGC
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9999999999985468765850787776754455520067659
|
| >d1khba1 c.91.1.1 (A:260-622) Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PEP carboxykinase-like superfamily: PEP carboxykinase-like family: PEP carboxykinase C-terminal domain domain: Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27343.73 Aligned_cols=1 Identities=0% Similarity=-1.688 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 WLAEHMlIlgvt~P~g~~~yvaaAFPSaCGKTnlAMl~p~~pGwkv~~vGDDiawi~~~~dG~l~AiNPE~G~FGVapgt 80 (363)
T d1khba1 1 WLAEHMLVLGITNPEGEKKYLAAAFPSACGKTNLAMMNPSLPGWKVECVGDDIAWMKFDAQGHLRAINPENGFFGVAPGT 80 (363)
T ss_dssp CEEESCEEEEEECTTSCEEEEEEECCTTSCHHHHHTCCCCSTTCEEEEEESSCEEEEECTTSBEEEECCCSEEEEECTTC
T ss_pred CHHHHHHHHEECCCCCCEEEEEEECCCCCCCHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCEEEECCCCCCCCCCCCC
T ss_conf 92352343032489997799987567443421088718899996778941746777787889678536655753447898
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~tnp~am~~l~~~~IFTNValt~DG~vwWeG~~~~~~~~~~~~~w~g~~~~~~~~~paaHpNsRFt~p~~qcp~id~~ 160 (363)
T d1khba1 81 SVKTNPNAIKTIQKNTIFTNVAETSDGGVYWEGIDEPLASGVTITSWKNKEWSSEDGEPCAHPNSRFCTPASQCPIIDAA 160 (363)
T ss_dssp CTTTCHHHHHHTTBSCEEESCEEETTSCEECTTCCCCCCTTCCEECTTSSEECTTSSSCSSCTTCEEEEEGGGCTTBCTT
T ss_pred CCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC
T ss_conf 98889999997536852443567789974678898889877524678899888888997778875202137669866843
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 wedP~GVpIsaiiFGGRr~~t~PlV~ea~~W~hGV~~GAtm~SE~TAAa~g~~g~vrrdPmAMlpF~gyn~gdY~~hWL~ 240 (363)
T d1khba1 161 WESPEGVPIEGIIFGGRRPAGVPLVYEALSWQHGVFVGAAMRSEATAAAEHKGKIIMHDPFAMRPFFGYNFGKYLAHWLS 240 (363)
T ss_dssp TTCTTCEEEEEEEEECCCSSSCCSEEECSSHHHHHHHHHTCEEEC--------CCEEECGGGCTTTCSSCHHHHHHHHHH
T ss_pred CCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCEEEEEEEECHHHHHHHHCCCCCEECCCHHHHHHCCCCHHHHHHHHHH
T ss_conf 35987514778997565688887248731466607873210104567764146864318066543328898999999876
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~g~~~~~k~PkIF~VNWFrKd~~GkFLWPGfGeN~RVLkWI~~Rv~G~~~A~eTPIG~vP~~~dLd~~GL~~~~~~el~~ 320 (363)
T d1khba1 241 MAQHPAAKLPKIFHVNWFRKDKEGKFLWPGFGENSRVLEWMFNRIDGKASTKLTPIGYIPKEDALNLKGLGHINMMELFS 320 (363)
T ss_dssp GGGSTTCBCCEEEEECSCCBCTTSCBSSCCGGGGHHHHHHHHHHHTC--CEEEETTEEEECTTCSCCTTCCCCCHHHHTC
T ss_pred HHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHC
T ss_conf 51246567984799976534588886578863156999999998649755201676312683446866788666999838
Q ss_pred ------------------------------------------E
Q ss_conf ------------------------------------------8
Q 002647 518 ------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------a 518 (897)
-
T Consensus 321 vd~~~w~~E~~~i~~~f~~~~g~~LP~el~~eL~~Lk~RL~~m 363 (363)
T d1khba1 321 ISKEFWDKEVEDIEKYLVDQVNADLPCEIEREILALKQRISQM 363 (363)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 7999999999999999998733305099999999999999649
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=0 Score=27341.63 Aligned_cols=1 Identities=100% Similarity=2.131 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (363)
T d2c5aa1 1 TYKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGV 80 (363)
T ss_dssp CCTTCCCCCSCTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTC
T ss_pred CHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHCCCCCEEEEECHHHHHHHHHHHCC
T ss_conf 92231356737878987999788878999999999978298999968985211342356727993515589899876148
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~ 160 (363)
T d2c5aa1 81 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQD 160 (363)
T ss_dssp SEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSS
T ss_pred CEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 76731023322222222222222222221246777767751752202446654235554456554554346677689888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~ 240 (363)
T d2c5aa1 161 AFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECV 240 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHH
T ss_conf 78999999999999999984997899982157616876432222221100000113345543438998578874002778
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~i~~~~~~~~~~~~~~d~ska~~~LGw~p~~sleegi~~t 320 (363)
T d2c5aa1 241 EGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEGVRGRNSDNNLIKEKLGWAPNMRLKEGLRIT 320 (363)
T ss_dssp HHHHHHHHSSCCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCCCCCSBCEECCHHHHHHHSCCCCCCHHHHHHHH
T ss_pred HHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHH
T ss_conf 99999985788882797168765389999999998689875476899998641455889999986999788999999999
Q ss_pred ------------------------------------------E
Q ss_conf ------------------------------------------8
Q 002647 518 ------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------a 518 (897)
|
T Consensus 321 i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (363)
T d2c5aa1 321 YFWIKEQIEKEKAKGSDVSLYGSSKVVGTQAPVQLGSLRAADG 363 (363)
T ss_dssp HHHHHHHHHHHHHHTCCGGGGGSCCCCCCCCCCCTTCCCCSCC
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCC
T ss_conf 9999998876541454432145331110105312476233789
|
| >d1zq1a2 c.88.1.1 (A:76-438) Glutamyl-tRNA(Gln) amidotransferase subunit D, GatD {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Glutaminase/Asparaginase superfamily: Glutaminase/Asparaginase family: Glutaminase/Asparaginase domain: Glutamyl-tRNA(Gln) amidotransferase subunit D, GatD species: Pyrococcus abyssi [TaxId: 29292]
Probab=100.00 E-value=0 Score=27340.63 Aligned_cols=1 Identities=0% Similarity=0.570 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~~~~~~~~~~~~~lPkI~ii~TGGTIa~~~~~~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~~~~~~dS~~~~~~~~~ 80 (363)
T d1zq1a2 1 KPEVHFEALIEGKPGLPEVTIIGTGGTIASRIDYETGAVYPAFTAEELAKALPEIFEVANVKPKLLFNIFSEDMKPKHWV 80 (363)
T ss_dssp CCCCCCCSSCCCCTTCCEEEEEECSCCCCEEEETTTTEEEECCCHHHHHHHCGGGGGTSEEEEEECCCCCGGGCCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHCCEEEEEEECCCCCHHCCHHHHH
T ss_conf 98644345688999999799997787314046687783378799999998575455125267999633896247999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~l~~~i~~~~~~~d~G~VvtHGTDTl~eTA~~L~~~l~~~~kPVVlTGa~~P~~~~~sDg~~NL~~Al~~A~~~~~~v~v 160 (363)
T d1zq1a2 81 KIAHEVAKALNSGDYGVVVAHGTDTMGYTAAALSFMLRNLGKPVVLVGAQRSSDRPSSDAAMNLICSVRMATSEVAEVMV 160 (363)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCSSSHHHHHHHHHHHEESCCSCEEEECCSSCTTSTTCSHHHHHHHHHHHHTSSBCSEEE
T ss_pred HHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEE
T ss_conf 99999998632777737983587739999999999724899638996334135677751077899999998565666326
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~i~~a~~v~K~~t~~~~aF~sp~~~pLg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~il~~~pG 240 (363)
T d1zq1a2 161 VMHGETGDTYCLAHRGTKVRKMHTSRRDAFRSINDVPIAKIWPNGEIEFLRKDYRKRSDEEVEVDDKIEEKVALVKVYPG 240 (363)
T ss_dssp EEESSSSSSCEEEEETTSEEECBSSCSTTEEECSSCCSEEECTTSCEEESCSCCCBCCCCCCEECCCCCCCEEEEECCTT
T ss_pred EEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
T ss_conf 75200143145532131012345655444468776744899738879862454468887534554245785799993699
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~l~~~~~~g~~GiVl~g~G~Gnvp~~~~~~l~~a~~~gi~VV~~Sqc~~G~v~~~~Y~~g~~l~~~GvI~~gdlt~ 320 (363)
T d1zq1a2 241 ISSEIIDFLVDKGYKGIVIEGTGLGHTPNDIIPSIERAVEEGVAVCMTSQCIYGRVNLNVYSTGRKLLKAGVIPCEDMLP 320 (363)
T ss_dssp CCTHHHHHHHHTTCSEEEEEEBTTTBCCGGGHHHHHHHHHTTCEEEEEESSSBSCCCCSSSHHHHHHHHTTCEECTTCCH
T ss_pred CCHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHCCEEECCCCCH
T ss_conf 99999999985798369998555888856788999999747926999368787885777654437788699898899899
Q ss_pred ------------------------------------------E
Q ss_conf ------------------------------------------8
Q 002647 518 ------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------a 518 (897)
-
T Consensus 321 ekArikLm~lL~~~~~~~eI~~~f~~nl~GE~t~~~~~~~~~~ 363 (363)
T d1zq1a2 321 ETAYVKLMWVLGHTQNLEEVRKMMLTNYAGEITPYTRFDTYLR 363 (363)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHHHSCSSTTSCSSCBTTCSCC
T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 9999999999859999999999971366853688766666569
|
| >d1cnza_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Isocitrate/Isopropylmalate dehydrogenase-like superfamily: Isocitrate/Isopropylmalate dehydrogenase-like family: Dimeric isocitrate & isopropylmalate dehydrogenases domain: 3-isopropylmalate dehydrogenase, IPMDH species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=0 Score=27339.28 Aligned_cols=1 Identities=0% Similarity=-1.655 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 M~~~~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~i~~~~~~~G~~~~~~~g~~lp~~t~e~i~~~dail~Gaig~P~ 80 (363)
T d1cnza_ 1 MSKNYHIAVLPGDGIGPEVMAQALKVMDAVRSRFDMRITTSHYDVGGIAIDNHGHPLPKATVEGCEQADAILFGSVGGPK 80 (363)
T ss_dssp CCCCEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTCCEEEEECCCTHHHHHHHSSSSCHHHHHHHHTSSEEEEEECCCGG
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEECHHHHHHHHCCCCCHHHHHHHHHCCCEEEECCCCCC
T ss_conf 99986699989888559999999999999866619706999996428799974996889999999850413772257878
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~s~~~~LR~~ldlyanvRPv~~~~g~~~~~~~~~~~~~~~iD~vivREnteg~Y~g~~~~~~~~~~~~~ 160 (363)
T d1cnza_ 81 WENLPPESQPERGALLPLRKHFKLFSNLRPAKLYQGLEAFCPLRADIAANGFDILCVRELTGGIYFGQPKGREGSGQYEK 160 (363)
T ss_dssp GTTSCGGGSTTHHHHHHHHHHHTCCEEEEEEECCTTCGGGCSBCHHHHHHCCEEEEEEECSSGGGTCSSCEEECCGGGCE
T ss_pred CCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEECCCCCCEE
T ss_conf 65543456644006799999738825777776125655323576554679842899874135433576531316885203
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~t~~~~~ri~r~Af~~A~~r~~kVt~v~KaNv~k~~~lf~~~~~eva~~yp~I~~~~~~vD~~~~~lv~~P~~f 240 (363)
T d1cnza_ 161 AFDTEVYHRFEIERIARIAFESARKRRRKVTSIDKANVLQSSILWREIVNDVAKTYPDVELAHMYIDNATMQLIKDPSQF 240 (363)
T ss_dssp EEEEEEEEHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCHHHHHHHHHHHHHHTTCTTSEEEEEEHHHHHHHHHHCGGGC
T ss_pred ECCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCC
T ss_conf 32237764899999999999999966995689813753304487899999986228874975176658999986455777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 dViv~~Nl~GDIlSDl~a~l~GglG~~~s~ni~~~~~a~fEp~HGsapdiaGk~~aNP~a~Ils~ammL~~~lg~~~~A~ 320 (363)
T d1cnza_ 241 DVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDANDAAT 320 (363)
T ss_dssp SEEEECHHHHHHHHHHHHHHHTCGGGCEEEEECTTSCEEEEESSCCCGGGTTTTCSCCHHHHHHHHHHHHHHSSCHHHHH
T ss_pred CEEEEHHHHHHHHHHHHHHHHCCCCCCHHEEEECCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 66642357777678899887504542111034036407851677765334798864909999999999984189879999
Q ss_pred ------------------------------------------E
Q ss_conf ------------------------------------------8
Q 002647 518 ------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------a 518 (897)
.
T Consensus 321 ~i~~Av~~~l~~g~~T~Dl~~~~~~~~T~e~~dai~~~l~~~~ 363 (363)
T d1cnza_ 321 AIEQAINRALEEGVRTGDLARGAAAVSTDEMGDIIARYVAEGV 363 (363)
T ss_dssp HHHHHHHHHHHTTCCCGGGTTTTTCCCHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 9999999999769967564689974899999999999987019
|
| >d1vyra_ c.1.4.1 (A:) Pentaerythritol tetranirate reductase {Enterobacter cloacae [TaxId: 550]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: FMN-linked oxidoreductases family: FMN-linked oxidoreductases domain: Pentaerythritol tetranirate reductase species: Enterobacter cloacae [TaxId: 550]
Probab=100.00 E-value=0 Score=27339.17 Aligned_cols=1 Identities=0% Similarity=-1.656 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~e~LF~P~~ig~~~lkNRiv~apm~~~~a~~~g~~~~~~~~~yy~~ra~~Glii~e~~~V~~~~~~~~~~~~l~~d~~i~ 80 (363)
T d1vyra_ 1 AEKLFTPLKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRASAGLIISEATQISAQAKGYAGAPGLHSPEQIA 80 (363)
T ss_dssp CCSTTSCEEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHHTTTSSEEEEEEEESSSTTCCSTTCCBSSSHHHHH
T ss_pred CCCCCCCCCCCCEEECCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCHHHCC
T ss_conf 95047983689989788738763468767798998989999999997086979981268885335799987437735503
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~k~l~~~vh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~ii~ 160 (363)
T d1vyra_ 81 AWKKITAGVHAEDGRIAVQLWHTGRISHSSIQPGGQAPVSASALNANTRTSLRDENGNAIRVDTTTPRALELDEIPGIVN 160 (363)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCTTSSCGGGSGGGCCCEESSSCCCCSEEEEECTTSCEEEEECCCCEECCGGGHHHHHH
T ss_pred CCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 20033445652697046644126765454436787630101223555555344766664557877764566777999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~f~~AA~rA~~aGfDgVEIH~ahGYLl~qFlSp~~N~RtDeYGGs~eNR~Rf~~Eii~aIr~~~g~d~i~~r~s~~~~~~ 240 (363)
T d1vyra_ 161 DFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQ 240 (363)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBT
T ss_pred HHHHHHHHHHHHCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCC
T ss_conf 99999999997513403451467103111446766566654464033444767888765553047887412311323311
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~gg~~~~e~~~~~~~l~~~gvd~i~vs~~~~~~~~~~~~~~~~~~~~~~~~~vi~~G~~t~~~ae~~l~~G~~DlV~ 320 (363)
T d1vyra_ 241 NVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERFHGVIIGAGAYTAEKAEDLIGKGLIDAVA 320 (363)
T ss_dssp TBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEE
T ss_pred CHHHCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCCCEEH
T ss_conf 10001330688999999877429806620347766786532888999898658539966899999999999879965115
Q ss_pred ------------------------------------------E
Q ss_conf ------------------------------------------8
Q 002647 518 ------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------a 518 (897)
.
T Consensus 321 ~gR~liadP~~~~K~~~g~~~~~~~~~~~~~~~~~~y~~y~~~ 363 (363)
T d1vyra_ 321 FGRDYIANPDLVARLQKKAELNPQRPESFYGGGAEGYTDYPSL 363 (363)
T ss_dssp ESHHHHHCTTHHHHHHHTCCCCCCCGGGSSSSSSTTTTCSCCC
T ss_pred HHHHHHHCCCHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCC
T ss_conf 5499987921999998389999998754237999985789898
|
| >d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: Hypothetical protein YteR domain: Hypothetical protein YteR species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=0 Score=27337.77 Aligned_cols=1 Identities=0% Similarity=0.537 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~~~~~~~~a~~~~~~~~~~~~~p~~~W~W~~G~~~~gl~~lye~Tgd~~y~~~a~~~~~~~~~~~g~~~~~~~~~d~~ 80 (363)
T d1nc5a_ 1 KSPLTYAEALANTIMNTYTVEELPPANRWHYHQGVFLCGVLRLWEATGEKRYFEYAKAYADLLIDDNGNLLFRRDELDAI 80 (363)
T ss_dssp CCHHHHHHHHHHHHHHHCCTTTSSSTTCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHBCTTCCBCCCTTCGGGT
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
T ss_conf 97579999999999973665348999982775649999999999883999999999999999844478745778987415
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~l~~ly~~Tgd~~y~~~a~~~~~~l~~~~~~~~g~~~~~~~~~~~~wiD~l~M~~p~l~~~~~~tgd~~y~d~a~~ 160 (363)
T d1nc5a_ 81 QAGLILFPLYEQTKDERYVKAAKRLRSLYGTLNRTSEGGFWHKDGYPYQMWLDGLYMGGPFALKYANLKQETELFDQVVL 160 (363)
T ss_dssp GGGGGHHHHHHHHCCHHHHHHHHHHHGGGGTSCBCTTSCBCSCTTSTTEEETHHHHHHHHHHHHHHHHHTCTHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 88999999998728688999999999862137878878631367887773642067748999999998698789999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~l~d~~~gL~~h~~~~~~~~~~~~~~~~~~~~~WsRGngW~~~gl~~~l~~lp~~~~~~~~~~~~~~~~~~~~ 240 (363)
T d1nc5a_ 161 QESLMRKHTKDAKTGLFYHAWDEAKKMPWANEETGCSPEFWARSIGWYVMSLADMIEELPKKHPNRHVWKNTLQDMIKSI 240 (363)
T ss_dssp HHHHHHHHHBCTTTSCBCSEEETTCCSTTSCTTTCBCSCCBHHHHHHHHHHHHHHGGGSCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99999997515889986525455676677788888786501100019999879999867777800999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~q~~d~G~w~~~~d~p~~~~~~~etSata~~~y~l~~g~~~g~l~~~y~~~~~ka~~~l~~~~~~~~~~g~~~v~~~~ 320 (363)
T d1nc5a_ 241 CRYQDKETGLWYQIVDKGDRSDNWLESSGSCLYMYAIAKGINKGYLDRAYETTLLKAYQGLIQHKTETSEDGAFLVKDIC 320 (363)
T ss_dssp HTTSCTTTSCCBSBTTCTTSTTCCBCHHHHHHHHHHHHHHHHHTSSCGGGHHHHHHHHHHHHHHHEEECTTSCEEECCEE
T ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
T ss_conf 84558878662310567777898633589999999999998758444999999999999999987403899874650357
Q ss_pred ------------------------------------------E
Q ss_conf ------------------------------------------8
Q 002647 518 ------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------a 518 (897)
-
T Consensus 321 ~g~~~~~~~~y~~~~~~~~~~~G~g~fllA~~e~~~l~~~~~~ 363 (363)
T d1nc5a_ 321 VGTSAGFYDYYVSRERSTNDLHGAGAFILAMTELEPLFRSAGK 363 (363)
T ss_dssp CSCCSCCHHHHHTSCEESSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 7899998200126787578757799999999999999984289
|
| >d1onha_ e.3.1.1 (A:) AMPC beta-Lactamase, class C {Enterobacter cloacae, P99, cephalosporinase [TaxId: 550]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: AMPC beta-Lactamase, class C species: Enterobacter cloacae, P99, cephalosporinase [TaxId: 550]
Probab=100.00 E-value=0 Score=27337.74 Aligned_cols=1 Identities=0% Similarity=-0.626 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 p~~~~~l~~~v~~~i~~~~~~~~~pG~~v~V~~~g~~~~~~~G~~~~~~~~p~~~dT~f~iaSitK~~ta~~i~~L~e~G 80 (363)
T d1onha_ 1 PVSEKQLAEVVANTVTPLMKAQSVPGMAVAVIYQGKPHYYTFGKADIAANKPVTPQTLFELGSISKTFTGVLGGDAIARG 80 (363)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTCSEEEEEEEETTEEEEEEEEEEETTTTEECCTTCBEECGGGHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEEEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCC
T ss_conf 98979999999999999998389986999999999999995876006779889999978720559999999999998669
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~l~lddpv~~ylp~~~~~~~~~ITi~~LL~HtSGl~~~~~~~~~~~~~~~~~~~~~~~~~~~PG~~~~Ysn~~~~llg~i 160 (363)
T d1onha_ 81 EISLDDPVTRYWPQLTGKQWQGIRMLDLATYTAGGLPLQVPDEVTDNASLLRFYQNWQPQWKPGTTRLYANASIGLFGAL 160 (363)
T ss_dssp SCCTTSBGGGTCTTCCCGGGTTCBHHHHHHTCSSCCCSSCCTTCCSHHHHHHHHHHCCCSSCTTSEECCCHHHHHHHHHH
T ss_pred CCEEEECCCHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCEEHHHHH
T ss_conf 62242021011100244434555065676530467544586455788999999987554148740231256410013555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ie~~tg~~~~~~~~e~i~~PLgm~~t~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~aggl~st~~Dla~~~~~~l 240 (363)
T d1onha_ 161 AVKPSGMPYEQAMTTRVLKPLKLDHTWINVPKAEEAHYAWGYRDGKAVRAVRVSPGMLDAQAYGVKTNVQDMANWVMANM 240 (363)
T ss_dssp HTGGGTSCHHHHHHHHTTTTTTCTTEESSCCGGGGGGBCCEEETTEEECCCCCCSSTTHHHHHCCEECHHHHHHHHHHHH
T ss_pred HHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCEEECHHHHHHHHHHHH
T ss_conf 56404997004457888861696421446870014652136665974541011024445656614417999999999860
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~G~ 320 (363)
T d1onha_ 241 APENVADASLKQGIALAQSRYWRIGSMYQGLGWEMLNWPVEANTVVEGSDSKVALAPLPVAEVNPPAPPVKASWVHKTGS 320 (363)
T ss_dssp CGGGCCSHHHHHHHHHHTSEEEEETTEEECSSCEEEESSCCHHHHHHHHSHHHHTSCEECEEEEEEECCCSSEEEEEEEE
T ss_pred CCCCCCCHHHHHHHHHHHCEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
T ss_conf 68877716788888775321045787566655020366655554445777542113444445677777778747972365
Q ss_pred ------------------------------------------E
Q ss_conf ------------------------------------------8
Q 002647 518 ------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------a 518 (897)
-
T Consensus 321 ~~G~~s~~~~~P~~~~~ivvl~N~~~~~~~~~~~a~~i~~al~ 363 (363)
T d1onha_ 321 TGGFGSYVAFIPEKQIGIVMLANTSYPNPARVEAAYHILEALQ 363 (363)
T ss_dssp CSSCEEEEEEEGGGTEEEEEEESBCCCHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 7875299999977997999997489998899999999999639
|
| >d2a1ha1 e.17.1.1 (A:3-365) Branched-chain aminoacid aminotransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily: D-aminoacid aminotransferase-like PLP-dependent enzymes family: D-aminoacid aminotransferase-like PLP-dependent enzymes domain: Branched-chain aminoacid aminotransferase species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=0 Score=27335.96 Aligned_cols=1 Identities=0% Similarity=-1.157 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~d~m~~~~~~~~~W~ng~ivp~~~~~isp~~~~l~YG~gvFEgiR~y~ 80 (363)
T d2a1ha1 1 SSFKAADLQLEMTQKPHKKPGPGEPLVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFK 80 (363)
T ss_dssp CCCCGGGCEECCCSSCCCCCCTTSCCCTTCSCCSEEEEEEEETTEECCCEEEESCCEEECTTBHHHHSCCEEECCEEEEE
T ss_pred CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEECCEEEECCCCEECCCHHHCCCCCEEEEEEEEEE
T ss_conf 97542115999767998898972237777755651799992288300887868412610720111304424353689998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~g~i~lFrld~Hl~RL~~Sa~~l~~~~~~~~~~~~~i~~~v~~n~~~v~~~~~~~~yiR~~v~~~~~~~~~~~~~~~~ 160 (363)
T d2a1ha1 81 GKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGVSQPRRAL 160 (363)
T ss_dssp CTTSCEEEESHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCCSTTCEEEEEEEEEECCBCCSCSCCSEEE
T ss_pred CCCCCEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC
T ss_conf 79997899735788777888889757999876899999999998777526654465379997622677644566776662
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~k~~~ny~~~~la~~eA~~~G~de~l~L~~~dg~v~E~~~sN 240 (363)
T d2a1ha1 161 LFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGNYGPTVLVQQEALKRGCEQVLWLYGPDHQLTEVGTMN 240 (363)
T ss_dssp EEEEEEEECCSSSSSSCCCEEEEECTTCCSCCTTSSTTSCBGGGTTTHHHHHHHHHHTTCSEEEEEETTTTEEEEETTEE
T ss_pred EEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCEEEECCCEE
T ss_conf 14897603456750013644689751011467545534214556422226888761489501100013451489616607
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 iF~v~~~kdG~~~l~tppl~~~ILpGITR~~Viela~~~g~i~V~Er~i~~~eL~~A~~~~~~dEvF~tgTa~~I~PV~~ 320 (363)
T d2a1ha1 241 IFVYWTHEDGVLELVTPPLNGVILPGVVRQSLLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHR 320 (363)
T ss_dssp EEEEEECTTSCEEEEECCCSSSSCCCHHHHHHHHHHHHHTSSEEEECCCBHHHHHHHHHTTCEEEEEEEETTTEEEEEEE
T ss_pred EEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHCCCCCEEEECCCCCEEEEEEE
T ss_conf 99998358885799723654334674489999999997399820664779999996765599618998478858999999
Q ss_pred ------------------------------------------E
Q ss_conf ------------------------------------------8
Q 002647 518 ------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------a 518 (897)
+
T Consensus 321 I~~~~~~~~i~~g~~g~~it~~L~~~l~~iq~G~~~~~W~~~v 363 (363)
T d2a1ha1 321 ILYKDRNLHIPTMENGPELILRFQKELKEIQYGIRAHEWMFPV 363 (363)
T ss_dssp EEETTEEEECTTGGGTTHHHHHHHHHHHHHHTTSSCCTTEEEC
T ss_pred EEECCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEC
T ss_conf 9867964893899808899999999999976788899973579
|
| >d1kwfa_ a.102.1.2 (A:) CelA cellulase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: Cellulases catalytic domain domain: CelA cellulase species: Clostridium thermocellum [TaxId: 1515]
Probab=100.00 E-value=0 Score=27335.94 Aligned_cols=1 Identities=0% Similarity=-1.656 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~p~~~~~~~~~~~~~~~qa~~~~~~~~~w~~~k~~~~~~~~~~~~~rv~d~~~~~~~t~SEGQgYGMl~Av~~~d~~~ 80 (363)
T d1kwfa_ 1 AGVPFNTKYPYGPTSIADNQSEVTAMLKAEWEDWKSKRITSNGAGGYKRVQRDASTNYDTVSQGMGYGLLLAVCFNEQAL 80 (363)
T ss_dssp CCSSCCCCCSSSCSCSSSCHHHHHHHHHHHHHHHHHHHEECTTSTTSCEECCCGGGTTCEEHHHHHHHHHHHHHTTCHHH
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHH
T ss_conf 99887788888766778757899999999999999998066798872488717988987312789999999998499999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 Fd~l~~wt~~~l~~~~L~aW~~~~~~~~~~~~~d~n~AtDgDl~iA~ALl~A~~~Wg~~~~~~Y~~~A~~ii~~i~~~~v 160 (363)
T d1kwfa_ 81 FDDLYRYVKSHFNGNGLMHWHIDANNNVTSHDGGDGAATDADEDIALALIFADKLWGSSGAINYGQEARTLINNLYNHCV 160 (363)
T ss_dssp HHHHHHHHHTTBCTTSSBCSEECTTSCBCTTTTTTSCBHHHHHHHHHHHHHHHHHHCSSSSSCHHHHHHHHHHHHHHHHB
T ss_pred HHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999974566888536778999877677888989768999999999999774874088999999999999998510
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~l~pg~~~~~~~~~npSY~~p~~~~~fa~~~~~~~W~~v~~~s~~ll~~~~~~~~~tGL~pDw~~~~~~p~~~~~ 240 (363)
T d1kwfa_ 161 EHGSYVLKPGDRWGGSSVTNPSYFAPAWYKVYAQYTGDTRWNQVADKCYQIVEEVKKYNNGTGLVPDWCTASGTPASGQS 240 (363)
T ss_dssp CTTTCCBCSBSSSCBTTBBCGGGCCHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHTTTSTTSCCCCSSBCTTSSCCTTSC
T ss_pred CCCCCEECCCCCCCCCCEECHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 78984553676568988558032359999999963687338999999999999976405888888400046888588898
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~ydA~Rvp~~ia~d~~~~g~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~G~~~~~~~~~~f~A~~~~~~~~~~~~~~ 320 (363)
T d1kwfa_ 241 YDYKYDATRYGWRTAVDYSWFGDQRAKANCDMLTKFFARDGAKGIVDGYTIQGSKISNNHNASFIGPVAAASMTGYDLNF 320 (363)
T ss_dssp CSBSTTGGGHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCGGGCCSCBCTTSCBCCCCCCTTTHHHHHHHHTTSSCHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHH
T ss_conf 87565599999999998750157145899999999998459888750481698446888979899999999873588589
Q ss_pred ------------------------------------------E
Q ss_conf ------------------------------------------8
Q 002647 518 ------------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~~~~~~~~~~~~YY~~~L~Ll~ll~~sG~~~~p~~~~ 363 (363)
T d1kwfa_ 321 AKELYRETVAVKDSEYYGYYGNSLRLLTLLYITGNFPNPLSDL 363 (363)
T ss_dssp HHHHHHHHHHCCCCGGGTTHHHHHHHHHHHHHTTCCCCTTSCC
T ss_pred HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 9999987522467777887899999999999749989887679
|
| >d1umga_ d.280.1.1 (A:) ST0318 {Archaeon Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Sulfolobus fructose-1,6-bisphosphatase-like superfamily: Sulfolobus fructose-1,6-bisphosphatase-like family: Sulfolobus fructose-1,6-bisphosphatase-like domain: ST0318 species: Archaeon Sulfolobus tokodaii [TaxId: 111955]
Probab=100.00 E-value=0 Score=27272.36 Aligned_cols=1 Identities=0% Similarity=0.537 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
|
T Consensus 1 k~TvSvIKADVGg~~GHt~~hp~ll~~a~~~l~~a~~~glliD~~v~~~GDDi~limTH~~G~d~~eiH~lAW~aF~~~t 80 (362)
T d1umga_ 1 KTTISVIKADIGSLAGHHIVHPDTMAAANKVLASAKEQGIILDYYITHVGDDLQLIMTHTRGELDTKVHETAWNAFKEAA 80 (362)
T ss_dssp CEEEEEEEECCCBBTTTTBCCHHHHHHHHHHHHHHHHTTSCSEEEEEEETTEEEEEEEESSCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHH
T ss_conf 94699997236787777768989999999999861138868877667643742578754689894899999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~vAK~l~LYGAGQDLL~DaFSGNvkGmGPgvAEmEf~ERpsEp~~vF~aDKTePGAfNlPlY~~FaDPfnt~GLvidp~m 160 (362)
T d1umga_ 81 KVAKDLGLYAAGQDLLSDSFSGNVRGLGPGVAEMEIEERASEPIAIFMADKTEPGAYNLPLYKMFADPFNTPGLVIDPTM 160 (362)
T ss_dssp HHHHHTTCBTTTTTTCTTSSSSSCCCCCCEEEEEEECCCSSCEEEEEEEESBCGGGGHHHHHHHHHCTTTCTHHHHCGGG
T ss_pred HHHHHHCCCCCCCHHHCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCEECCCC
T ss_conf 99887256556621211346765257787437887225789857999853888760120689984284578750317101
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 h~Gf~FeV~Dv~~~k~i~l~~Pee~Ydllalig~~~RyvI~~V~~k~~~eiaav~St~RL~~iAG~YvGKDDPV~iVR~Q 240 (362)
T d1umga_ 161 HGGFKFEVLDVYQGEAVMLSAPQEIYDLLALIGTPARYVIRRVYRNEDNLLAAVVSIERLNLIAGKYVGKDDPVMIVRLQ 240 (362)
T ss_dssp TTCEEEEEEETTTTEEEEEETTTTHHHHHHHHTSTTTEEEEEEEETTTCCEEEEECCCCCBCC---CBCCCSCEEEEECS
T ss_pred CCCEEEEEEEECCCEEEEECCCHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEEHHHHHHHHCEECCCCCCEEEEEEC
T ss_conf 36705899970257178851806877899983898735899998668997789976678776406120688866999846
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~gfPA~gEvlepFa~phlVaGwmRGSH~gPlMPV~~~da~~trFdgpPrV~alGFql~~GkL~GP~DlFddpafD~~R~~ 320 (362)
T d1umga_ 241 HGLPALGEALEAFAFPHLVPGWMRGSHYGPLMPVSQRDAKATRFDGPPRLLGLGFNVKNGRLVGPTDLFDDPAFDETRRL 320 (362)
T ss_dssp SSSCCHHHHHHTTSSCCEEEETGGGCEEEECEEECSTTCSCCGGGCSCEEEEEEEEEETTEEEEEEESSCSGGGHHHHHH
T ss_pred CCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCEECCCCCCCCCCCHHHHHHH
T ss_conf 88996465542244652114434566678743201456887567899768888888627887376324577430689999
Q ss_pred -----------------------------------------E
Q ss_conf -----------------------------------------8
Q 002647 518 -----------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------a 518 (897)
-
T Consensus 321 a~~~A~~mR~~Gpf~PhrLp~~emEYttlp~vl~kL~~rf~~ 362 (362)
T d1umga_ 321 ANIVADYMRRHGPFMPHRLEPTEMEYTTLPLILEKLKDRFKK 362 (362)
T ss_dssp HHHHHHHHHTTTTCTTTBCCGGGCSSCCHHHHHHHTTTTCCC
T ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHCC
T ss_conf 999999998549987655897880211388999999887519
|
| >d1gqea_ e.38.1.1 (A:) Polypeptide chain release factor 2 (RF2) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Release factor superfamily: Release factor family: Release factor domain: Polypeptide chain release factor 2 (RF2) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27270.86 Aligned_cols=1 Identities=0% Similarity=-2.254 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~l~~~i~eL~~rl~~Lr~~fDld~kk~Rl~ELE~~lsdP~fW~D~~kAqkl~KE~s~L~~iVe~~~~l~~~leDl~eL 80 (362)
T d1gqea_ 1 INPVNNRIQDLTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGL 80 (362)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHSGGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 91689999999999999997769798999999999986397144499999999999999999999999999999988877
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~Ela~ee~deel~~e~~~~l~~l~~~l~~le~~ll~~~~~D~~nailEIrAGaGG~EA~dfA~~L~RMY~r~ae~~gwk~ 160 (362)
T d1gqea_ 81 LELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLRWAESRGFKT 160 (362)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHHHHHHGGGGGCCSTTTTSCEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_conf 87764110588888899999998622467787521367545454379998257606688999999999999999759858
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 eiid~~~~e~gG~K~v~~~I~G~~ayg~Lk~EsGvHRvqRvp~~es~gr~hTS~a~V~v~P~~~~~~~~~i~~~dl~i~~ 240 (362)
T d1gqea_ 161 EIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDV 240 (362)
T ss_dssp EEEEEEECSSSSEEEEEEEEESTTHHHHHGGGCEEEEEEEECTTSSSCCEEEEEEEEEEEECCBTTBCCCCCGGGEEEEE
T ss_pred EEECCCCCCCCCEEEEEEEEECCCHHHHHHHHCCCEEEEEECCCCCCCEEEEEEEEEEEEECCCCCCCEECCHHHEEEEE
T ss_conf 99414567766546999999776688999872375048884046777347998778899624787631111767827997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~rs~g~GGQ~vN~t~savri~H~ptgi~v~~q~ersq~~Nk~~A~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~i 320 (362)
T d1gqea_ 241 YRASGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYEVEMQKKNAEKQAMEDNKSDIGWGSQI 320 (362)
T ss_dssp ECCCCSSCCSTTSSCCEEEEEETTTCCEEEECSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSTTCCCCCSCSEE
T ss_pred EECCCCCCCCHHHHHCEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 52699886512033141688744733677764221014789999999999999999999999999887423127576984
Q ss_pred -----------------------------------------E
Q ss_conf -----------------------------------------8
Q 002647 518 -----------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------a 518 (897)
.
T Consensus 321 RtY~~~~~rv~DhR~~~~~~~~~~vl~G~ld~~i~a~l~~~~ 362 (362)
T d1gqea_ 321 RSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 362 (362)
T ss_dssp EEEEGGGTEEEETTTCCEESCHHHHHTTCCHHHHHHHHHTTC
T ss_pred CCCCCCCCCCCCCCCCCEECCHHHHHCCCHHHHHHHHHHCCC
T ss_conf 676589981500053972578468758877999999987779
|
| >d1umda_ c.36.1.11 (A:) Branched-chain alpha-keto acid dehydrogenase, PP module {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiamin diphosphate-binding fold (THDP-binding) superfamily: Thiamin diphosphate-binding fold (THDP-binding) family: Branched-chain alpha-keto acid dehydrogenase PP module domain: Branched-chain alpha-keto acid dehydrogenase, PP module species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=27268.34 Aligned_cols=1 Identities=0% Similarity=-1.257 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~~~r~l~~~g~~~~~~~~~ls~e~l~~~yr~M~~~R~~ee~~~~l~~~g~~~~~~~~~GqEA~~vg~~~al~ 80 (362)
T d1umda_ 1 HRFETFTEEPIRLIGEEGEWLGDFPLDLEGEKLRRLYRDMLAARMLDERYTILIRTGKTSFIAPAAGHEAAQVAIAHAIR 80 (362)
T ss_dssp CCCCSSCSSCBCCBCTTSCBCCSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSCCCCCTTCHHHHHHHHHHSC
T ss_pred CCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCC
T ss_conf 99877886764777899989987899979999999999999999999999999977996022278978999999999758
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~D~~~~~yR~h~~~la~G~~~~~~~ae~~gk~~g~~~Grggs~H~~~~~~~~~~~~~ivg~~~p~a~G~A~a~k~~~~ 160 (362)
T d1umda_ 81 PGFDWVFPYYRDHGLALALGIPLKELLGQMLATKADPNKGRQMPEHPGSKALNFFTVASPIASHVPPAAGAAISMKLLRT 160 (362)
T ss_dssp TTTSEEECCTTTHHHHHHHTCCHHHHHHHHHTBTTCTTTTCSCSSCCCBTTTTBCCCCSSTTTTHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
T ss_conf 78786873134189999987439999999845568986543542124212367444444223230077777876530344
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~v~v~~~GDGa~~eG~f~Ealn~A~~~~lPvifv~eNN~~aist~~~~~~~~~~~~~~a~~~gi~~~~vDGnDv~~v~~ 240 (362)
T d1umda_ 161 GQVAVCTFGDGATSEGDWYAGINFAAVQGAPAVFIAENNFYAISVDYRHQTHSPTIADKAHAFGIPGYLVDGMDVLASYY 240 (362)
T ss_dssp CCCEEEEEETGGGGSHHHHHHHHHHHHTTCSEEEEEEECSEETTEEHHHHCSSSCSGGGGGGTTSCEEEEETTCHHHHHH
T ss_pred CCEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHEEEEEEECCCHHHHHHH
T ss_conf 42356522688656773499997764336870366520366644321011145344422232100026744505889999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 a~~~Ai~~~R~g~gP~lIE~~tyR~~gHs~~Dd~~~YR~~~Ei~~w~~~DPi~~~~~~L~~~g~~se~e~~~i~~ei~~~ 320 (362)
T d1umda_ 241 VVKEAVERARRGEGPSLVELRVYRYGPHSSADDDSRYRPKEEVAFWRKKDPIPRFRRFLEARGLWNEEWEEDVREEIRAE 320 (362)
T ss_dssp HHHHHHHHHHTTCCCEEEEEECCCCSCSSTTCCGGGTSCHHHHHHHHTTCHHHHHHHHHHTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf 99999999985689789971334335787655202220014667773299899999999987999999999999999999
Q ss_pred -----------------------------------------E
Q ss_conf -----------------------------------------8
Q 002647 518 -----------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------a 518 (897)
.
T Consensus 321 V~~a~~~A~~~p~P~~~~l~~~VY~~~~~~l~~q~~~~~~~~ 362 (362)
T d1umda_ 321 LERGLKEAEEAGPVPPEWMFEDVFAEKPWHLLRQEALLKEEL 362 (362)
T ss_dssp HHHHHHHHHHTCBCCGGGGGTTSSSSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHC
T ss_conf 999999998679989899971315799963999999999559
|
| >d3thia_ c.94.1.1 (A:) Thiaminase I {Paenibacillus thiaminolyticus [TaxId: 49283]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Periplasmic binding protein-like II superfamily: Periplasmic binding protein-like II family: Phosphate binding protein-like domain: Thiaminase I species: Paenibacillus thiaminolyticus [TaxId: 49283]
Probab=100.00 E-value=0 Score=27265.53 Aligned_cols=1 Identities=100% Similarity=1.400 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~tl~~~~~~~~p~~~~~~~~~~~~F~~~~P~V~v~~~~~~~~~~~~~~~pDv~~~~~~~~~~~~~~g~l~~L~~~~~~~~ 80 (362)
T d3thia_ 1 ITLKVAIYPYVPDPARFQAAVLDQWQRQEPGVKLEFTDWDSYSADPPDDLDVFVLDSIFLSHFVDAGYLLPFGSQDIDQA 80 (362)
T ss_dssp CEEEEECCSCSSCHHHHHHHHHHHHHHHCTTSEEEECCCCTTTCCCCTTCCEEEEEGGGHHHHHHTTCEECBCGGGCTTG
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHCCCCCCEEEEECHHHHHHHHHCCCCCCCCHHHHHCC
T ss_conf 98999966788867999999999999988193899996652544489989699989088999998898233871011110
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~dG~~y~vP~~~~~~~~~ynkd~~~~aG~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (362)
T d3thia_ 81 EDVLPFALQGAKRNGEVYGLPQILCTNLLFYRKGDLKIGQVDNIYELYKKIGTSHSEQIPPPQNKGLLINMAGGTTKASM 160 (362)
T ss_dssp GGBCHHHHHHTEETTEECCEEEEEECEEEEEETTCHHHHTCCBHHHHHHHHCCCCCCCSSCCEEEEEEECCCSHHHHHHH
T ss_pred CHHHHHHHHCEEECCEEEEEEEECCCEEEEECHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHH
T ss_conf 01113344311569979997651210799961468997389999973789999999751257887246305877526889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~G~~a~~~~~~~~~~~~~~ 240 (362)
T d3thia_ 161 YLEALIDVTGQYTEYDLLPPLDPLNDKVIRGLRLLINMAGEKPSQYVPEDGDAYVRASWFAQGSGRAFIGYSESMMRMGD 240 (362)
T ss_dssp HHHHHHHHHTCCCCCSSCCCSSSCCHHHHHHHHHHHHHHCHHHHHCCCTTCCTTHHHHHHHHTBEEEEEEETTHHHHHGG
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEECHHHHHHHHH
T ss_conf 99999861885113677633443679999999999997304775334466770122111005818999916587655543
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~P~~~~~~~~~~~~~~~~i~~~s~~~e~A~~fi~fl~s~e~~~~~~~~~g~~~~~~~~~pa~~~~~e~~~~ 320 (362)
T d3thia_ 241 YAEQVRFKPISSSAGQDIPLFYSDVVSVNSKTAHPELAKKLANVMASADTVEQALRPQADGQYPQYLLPARHQVYEALMQ 320 (362)
T ss_dssp GGGTEEEECCBSCSSCCCCEEEEEEEEEETTCSCHHHHHHHHHHHHSHHHHHHHHSCCSTTCCCCCCEESBHHHHHHHTT
T ss_pred CCCCCCEEECCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHC
T ss_conf 06766546415787789875450231101676479999999999719999999998468876742445057999863310
Q ss_pred -----------------------------------------E
Q ss_conf -----------------------------------------8
Q 002647 518 -----------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------a 518 (897)
|
T Consensus 321 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~e~lg 362 (362)
T d3thia_ 321 DYPIYSELAQIVNKPSNRVFRLGPEVRTWLKDAKQVLPEALG 362 (362)
T ss_dssp TCTHHHHHHHHHTCTTCEECCCCTTHHHHHHHHTTTHHHHHC
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 398699999999987688761799999999999999998609
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=100.00 E-value=0 Score=27264.11 Aligned_cols=1 Identities=0% Similarity=-0.194 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~~~~~~~f~le~G~~l~~~~l~Y~t~G~ln~~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG~g~~ 80 (362)
T d2pl5a1 1 GSIGIIETKYAEFKELILNNGSVLSPVVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKS 80 (362)
T ss_dssp CCCCBCCCEEEEESCEECTTSCEESSEEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSS
T ss_pred CCCCCEEEEEEECCCEECCCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCCCCHHCCCCCCCCCCCCCHHHHHCCCCCC
T ss_conf 97673666688518756689887689569999630338889988998788776321155677667883358884599976
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 lDt~~yfVI~~n~lG~~~~ss~~~s~~p~~~~~yg~~fP~~t~~D~v~~~~~ll~~LGI~~l~~viG~SmGGmqAl~wA~ 160 (362)
T d2pl5a1 81 FDTNQYFIICSNVIGGCKGSSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSI 160 (362)
T ss_dssp EETTTCEEEEECCTTCSSSSSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHH
T ss_conf 47553579962335676666675420012345557677520168899999999997186726777403577889999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~yPd~v~~~v~ia~sa~~s~~~~~~~~~~~~aI~~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~~ 240 (362)
T d2pl5a1 161 AYPNSLSNCIVMASTAEHSAMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPR 240 (362)
T ss_dssp HSTTSEEEEEEESCCSBCCHHHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCS
T ss_pred HCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC
T ss_conf 48367664001346533677799999999999844974236875667836799999999999870926666563333444
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~ve~yl~~~g~k~~~rfDan~yl~l~~a~~~~Di~~~~~l~~aL~~I~AkvLvi~~~sD~lFpp~~~~~~a~ 320 (362)
T d2pl5a1 241 GNILSTDFAVGSYLIYQGESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVK 320 (362)
T ss_dssp SCTTTTTTTSCGGGGSTTCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHH
T ss_conf 55442067799999998988874078778999986311146333225999996189988999857552759999999999
Q ss_pred -----------------------------------------E
Q ss_conf -----------------------------------------8
Q 002647 518 -----------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------a 518 (897)
-
T Consensus 321 ~l~~a~~~v~~~eI~S~~GHdaFL~e~~~~~~~I~~FL~~p~ 362 (362)
T d2pl5a1 321 SLEAADKRVFYVELQSGEGHDSFLLKNPKQIEILKGFLENPN 362 (362)
T ss_dssp HHHHTTCCEEEEEECCCBSSGGGGSCCHHHHHHHHHHHHCCC
T ss_pred HHHHCCCCEEEEEECCCCCCCHHCCCHHHHHHHHHHHHCCCC
T ss_conf 997579976999948999742105488999999999973999
|
| >d1pvna1 c.1.5.1 (A:2-99,A:231-494) Inosine monophosphate dehydrogenase (IMPDH) {Tritrichomonas foetus [TaxId: 5724]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Inosine monophosphate dehydrogenase (IMPDH) family: Inosine monophosphate dehydrogenase (IMPDH) domain: Inosine monophosphate dehydrogenase (IMPDH) species: Tritrichomonas foetus [TaxId: 5724]
Probab=100.00 E-value=0 Score=27262.79 Aligned_cols=1 Identities=0% Similarity=-0.559 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~e~~ltFdDVlLvP~~Sti~s~r~dVdl~~~l~~~~~~~~~~i~l~iPIIsAnMDTVt~~~mA~~la~~Gglgvih 80 (362)
T d1pvna1 1 AKYYNEPCHTFNEYLLIPGLSTVDCIPSNVNLSTPLVKFQKGQQSEINLKIPLVSAIMQSVSGEKMAIALAREGGISFIF 80 (362)
T ss_dssp CEECSSCBCCGGGEEECCCCBCTTCCGGGCBCCEECSCEETTSCCSCEESSSEEECSCTTTCSHHHHHHHHHTTCEEEEC
T ss_pred CCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCEEEEE
T ss_conf 95456788785566983798767777101360268774024556663569847846888768999999999888977995
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 R~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ag~d~i~IDvAhG~~~~v~~~i~~ir~~~~~~~~IiAGNV 160 (362)
T d1pvna1 81 GSQSIESQAAMVHAVKNFRYLVGAGINTRDFRERVPALVEAGADVLCIDSSDGFSEWQKITIGWIREKYGDKVKVGAGNI 160 (362)
T ss_dssp CSSCHHHHHHHHHHHHTCCCCCEEEECSSSHHHHHHHHHHHTCSEEEECCSCCCBHHHHHHHHHHHHHHGGGSCEEEEEE
T ss_pred ECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECHHCCCHHHHHHHHHHHHHHHCCCEEEECCCC
T ss_conf 05999999998642332023221211013567777777641854775300001015788999999886533103421244
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 aT~e~~~~L~~aGaD~vkVGIG~Gs~CTTr~~tGvG~Pq~sAv~e~a~~~~~~~~~~~~~v~iiaDGGi~~~gdi~KAla 240 (362)
T d1pvna1 161 VDGEGFRYLADAGADFIKIGIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYHMTLALA 240 (362)
T ss_dssp CSHHHHHHHHHHTCSEEEECSSCSTTBCHHHHTCBCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEE
T ss_conf 67889999997297579844303434343655503771677999999999875332036875353323474662357888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~GAd~VM~G~~lAg~~Espg~~~~~~g~~~k~~~Gm~S~~a~~~~~~~~~~~~~~~~~eG~~~~v~~~g~~~~~~~~l~g 320 (362)
T d1pvna1 241 MGADFIMLGRYFARFEESPTRKVTINGSVMKEYWGEGSSRARNWQRYDLGGKQKLSFEEGVDSYVPYAGKLKDNVEASLN 320 (362)
T ss_dssp TTCSEEEESHHHHTBTTSSSCEEEETTEEEEEEECTTSTTTCCGGGGCSSSCSSCSSCCBCEEEEECCBCHHHHHHHHHH
T ss_pred EECCCEEEHHHHHCCCCCCCCCEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHH
T ss_conf 71340021115405565577310103513666622531213322212446521036899737996268777889999999
Q ss_pred -----------------------------------------E
Q ss_conf -----------------------------------------8
Q 002647 518 -----------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------a 518 (897)
-
T Consensus 321 glrs~~~y~G~~~l~~~~~~~~f~~~t~~~~~E~~~H~~~~~ 362 (362)
T d1pvna1 321 KVKSTMCNCGALTIPQLQSKAKITLVSSVSIVEGGAHDVIVK 362 (362)
T ss_dssp HHHHHHHHTTCSBHHHHHHHCEEEEBCHHHHHHHSCCSSEEC
T ss_pred HHHHHHHHCCCCCHHHHHHCCEEEEECCCCCCCCCCCCEEEC
T ss_conf 999987532767599997488999988210211568826739
|
| >d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin species: Mouse (Mus musculus), kif2c [TaxId: 10090]
Probab=100.00 E-value=0 Score=27262.39 Aligned_cols=1 Identities=0% Similarity=-0.160 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~V~vRvRPl~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (362)
T d1v8ka_ 1 PNWEFARMIKEFRVTMECSPLTVTDPIEEHRICVCVRKRPLNKQELAKKEIDVISVPSKCLLLVHEPKLKVDLTKYLENQ 80 (362)
T ss_dssp CCHHHHHHHHHHHHHHTCCTTTTTCTTSCCCEEEEEEECCCCHHHHHTTCCBCEECCSSSEEEEEEEEECTTCCEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCE
T ss_conf 96689999999986413489877888888888999980899968863799469998899189981886444655676860
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~f~FD~vf~~~~~Q~~Vy~~~~~plv~~~l~G~n~tifaYGqTGSGKTyTm~G~~~~~~~~~~~Giipr~~~~lf~~~~~ 160 (362)
T d1v8ka_ 81 AFCFDFAFDETASNEVVYRFTARPLVQTIFEGGKATCFAYGQTGSGKTHTMGGDLSGKSQNASKGIYAMASRDVFLLKNQ 160 (362)
T ss_dssp EEECSEEECTTCCHHHHHHHTTHHHHHHHHTTCEEEEEEEESTTSSHHHHHHCBC----CBGGGSHHHHHHHHHHHHHTS
T ss_pred EEECCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEHHHHHHHHHHC
T ss_conf 67678661999998999999999999998741681388632578888603330577876555687133115567777630
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~v~vS~~EIyne~i~DLL~~~~~~~~~~~~~~~~~v~gl~e~~v~s~~e~~~~l~~g~~~R~~~~T~~N~~S 240 (362)
T d1v8ka_ 161 PRYRNLNLEVYVTFFEIYNGKVFDLLNKKAKLRVLEDSRQQVQVVGLQEYLVTCADDVIKMINMGSACRTSGQTFANSNS 240 (362)
T ss_dssp HHHHTTCCEEEEEEEEEETTEEEETTTTTEEEEEEECSSCCEEEETCCCEEESSHHHHHHHHHHHHHTCC--------CC
T ss_pred CCCCCCCHHHEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 12346323311021463277487634577544322124577465898899946889989987414545430245674567
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 SRSH~i~~i~i~~~~~~~~~l~~VDLAGsEr~~~~~~~~~~~~~E~~~IN~SL~~L~~vi~aL~~~~~hiPyR~SkLT~l 320 (362)
T d1v8ka_ 241 SRSHACFQILLRTKGRLHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQV 320 (362)
T ss_dssp CSSEEEEEEEEESSSSEEEEEEEEECCCCCC------------TTHHHHHHHHHHHHHHHHHHTC------CCCCHHHHH
T ss_pred CCEEEEEEEEEEECCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHH
T ss_conf 51005799999855600136765202566554444453156553332211107789999999856999688746888886
Q ss_pred -----------------------------------------E
Q ss_conf -----------------------------------------8
Q 002647 518 -----------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------a 518 (897)
.
T Consensus 321 LkdsllGgns~t~~i~~vsp~~~~~~eTl~TL~fa~rak~It 362 (362)
T d1v8ka_ 321 LRDSFIGENSRTCMIAMISPGISSCEYTLNTLRYADRVKELS 362 (362)
T ss_dssp TTHHHHSSSEEEEEEEEECCBGGGHHHHHHHHHHHHHHHTTC
T ss_pred HHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 133047998619999996987010899999999999974379
|
| >d1nqka_ c.1.16.4 (A:) Alkanesulfonate monooxygenase SsuD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Bacterial luciferase-like family: Ssud-like monoxygenases domain: Alkanesulfonate monooxygenase SsuD species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27262.33 Aligned_cols=1 Identities=0% Similarity=-2.021 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~AE~lGfd~~w~~eh~~~~dp~~~la~la~~T~rI~lgt~V~~ 80 (362)
T d1nqka_ 1 MSLNMFWFLPTHGDGHYLGTEEGSRPVDHGYLQQIAQAADRLGYTGVLIPTGRSCEDAWLVAASMIPVTQRLKFLVALRP 80 (362)
T ss_dssp CCBEEEEECCTTCEESSTTSSTTEECCCHHHHHHHHHHHHHHTCSEEEECCSTTSCCHHHHHHTTSTTCSSCEEEEEECT
T ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCEEEEEEEECC
T ss_conf 92479997456899887888888788999999999999998499999968888888899999999997490699999739
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~P~~~A~~~AtLd~lS~GR~~lGlG~G~~~~e~~~~g~~~~~~~~~~~~~E~~~ilr~l~~~e~v~~~G~~~~~~~~ 160 (362)
T d1nqka_ 81 SVTSPTVAARQAATLDRLSNGRALFNLVTGSDPQELAGDGVFLDHSERYEASAEFTQVWRRLLQRETVDFNGKHIHVRGA 160 (362)
T ss_dssp TTSCHHHHHHHHHHHHHHTTSCEEEEECCCCCHHHHHHHTCCCCTTHHHHHHHHHHHHHHHHTTTCCEEEECSSCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCC
T ss_conf 98986999999999999749985268863666888852122220245566678989999875025664554124652587
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~p~~~p~ppi~~a~~~p~~~~~Aa~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Gr~~~~~~~~~~~~~~~~~~~~ 240 (362)
T d1nqka_ 161 KLLFPAIQQPYPPLYFGGSSDVAQELAAEQVDLYLTWGEPPELVKEKIEQVRAKAAAHGRKIRFGIRLHVIVRETNDEAW 240 (362)
T ss_dssp CCSSCCSSSSSSCEEEECSSHHHHHHHHHHCSEEEEECCCHHHHHHHHHHHHHHHHTTTCCCEEEEEEEEEEESSHHHHH
T ss_pred CCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCHHHHH
T ss_conf 54234478997016874265789998874265512458999999999999999999709975242343699944689999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGtpe~V~e~L~~~~ 320 (362)
T d1nqka_ 241 QAAERLISHLDDETIAKAQAAFARTDSVGQQRMAALHNGKRDNLEISPNLWAGVGLVRGGAGTALVGDGPTVAARINEYA 320 (362)
T ss_dssp HHHHHHTTTSCHHHHHHHHHHSCC-----------------CTTEEETTEEGGGGSSSSSCSCEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHH
T ss_conf 98765665430889999986542012100466776530340144433467767777506888708858999999999999
Q ss_pred -----------------------------------------E
Q ss_conf -----------------------------------------8
Q 002647 518 -----------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------a 518 (897)
-
T Consensus 321 ~~G~d~~~l~~~~~~~~l~~f~eeV~P~l~~~~~~~~~~~~~ 362 (362)
T d1nqka_ 321 ALGIDSFVLSGYPHLEEAYRVGELLFPLLDVAIPEIPQPQPL 362 (362)
T ss_dssp TTTCCEEEEECSSHHHHHHHHHHHTGGGSCBCCCCCCCCCCC
T ss_pred HCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 729998999489998999999998999870135067899998
|
| >d1vlca_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Isocitrate/Isopropylmalate dehydrogenase-like superfamily: Isocitrate/Isopropylmalate dehydrogenase-like family: Dimeric isocitrate & isopropylmalate dehydrogenases domain: 3-isopropylmalate dehydrogenase, IPMDH species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=27262.27 Aligned_cols=1 Identities=0% Similarity=-0.428 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
|
T Consensus 1 ~~~~~~~~~kI~vipGDGIGpEV~~~~~~Vl~a~~~~~~~~~e~~~~~~G~~~~~~~G~~lp~et~e~~~~~dail~Gai 80 (362)
T d1vlca_ 1 KIHHHHHHMKIAVLPGDGIGPEVVREALKVLEVVEKKTGKTFEKVFGHIGGDAIDRFGEPLPEETKKICLEADAIFLGSV 80 (362)
T ss_dssp CCCCCCSEEEEEEEEESTHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCTHHHHHHHSSSSCHHHHHHHHHSSEEEEEEC
T ss_pred CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 97768985799998988667999999999999998762997899998457899997789787899999999789871577
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 g~p~~~~~~~~~~~~~~~~~~lR~~ldlyanvRP~r~~~~~~~~~~~~~~~~~~~iD~vivREnteg~Y~g~~~~~~~~~ 160 (362)
T d1vlca_ 81 GGPKWDDLPPEKRPEIGGLLALRKMLNLYANIRPIKVYRSLVHVSPLKEKVIGSGVDLVTVRELSYGVYYGQPRGLDEEK 160 (362)
T ss_dssp CCGGGTTSCSTTSHHHHTHHHHHHHTTCCEEEEEEECCGGGGGGSSSCHHHHTTCCEEEEEEECSSGGGTEEEEEECSSC
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCE
T ss_conf 79986543213477665578899974433220026753034566666555667772379850124675557777788856
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~t~~~~~Riar~Af~~A~~~~k~Vt~v~K~Nv~~~~~lf~~~~~eva~~yp~I~~~~~~vD~~~~~lv~~P~~f 240 (362)
T d1vlca_ 161 GFDTMIYDRKTVERIARTAFEIAKNRRKKVTSVDKANVLYSSMLWRKVVNEVAREYPDVELTHIYVDNAAMQLILKPSQF 240 (362)
T ss_dssp EEEECCCCHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCHHHHHHHHHHHHHHTTCTTSEEEEEEHHHHHHHHHHCGGGC
T ss_pred EEEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHCCCCC
T ss_conf 99989943478789999999998618980799943775201589999999999667986999730989999998665777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 dViv~~Nl~GDIlSDl~a~l~GglGl~ps~nig~~~~fE~~HGSApdiaGk~iaNP~a~ils~ammL~~~lg~~~~A~~i 320 (362)
T d1vlca_ 241 DVILTTNMFGDILSDESAALPGSLGLLPSASFGDKNLYEPAGGSAPDIAGKNIANPIAQILSLAMMLEHSFGMVEEARKI 320 (362)
T ss_dssp SEEEECHHHHHHHHHHHTTSSSCGGGCEEEEESSSEEEEESSCCCTTTTTTTCSCCHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred CEEEECCHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 58985306666777899998513332101210422323125686201058986480999999999987346986999999
Q ss_pred -----------------------------------------E
Q ss_conf -----------------------------------------8
Q 002647 518 -----------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------a 518 (897)
-
T Consensus 321 ~~Av~~~l~~G~~T~Dlg~~~~~~~~T~e~~dav~~~l~~l~ 362 (362)
T d1vlca_ 321 ERAVELVIEEGYRTRDIAEDPEKAVSTSQMGDLICKKLEEIW 362 (362)
T ss_dssp HHHHHHHHHTTCCCGGGCSSGGGCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 999999998599570004699997769999999999999759
|
| >d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Extended AAA-ATPase domain domain: Papillomavirus large T antigen helicase domain species: Simian virus 40 [TaxId: 10633]
Probab=100.00 E-value=0 Score=27261.28 Aligned_cols=1 Identities=0% Similarity=0.936 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~q~~~~~l~e~a~~~~~~d~~lll~~y~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~nA~~fl~~~~Q~k~~k~~~~~v~ 80 (362)
T d1svma_ 1 KQVSWKLVTEYAMETKCDDVLLLLGMYLEFQYSFEMCLKCIKKEQPSHYKYHEKHYANAAIFADSKNQKTICQQAVDTVL 80 (362)
T ss_dssp CCCCHHHHHHHHHHTTCCCHHHHHHHHHGGGSCSTTCHHHHTTCCHHHHTTHHHHHHHHHHHTTCSCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 97428888988987589739999999998712518889999877789999999860669999873106899999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~kr~~~~~ms~~e~i~~~~~~~~~~~p~~~~~~~~~d~~~~~~il~~l~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~ 160 (362)
T d1svma_ 81 AKKRVDSLQLTREQMLTNRFNDLLDRMDIMFGSTGSADIEEWMAGVAWLHCLLPKMDSVVYDFLKCMVYNIPKKRYWLFK 160 (362)
T ss_dssp HHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTSTTCCCCHHHHHHHHHHHTTTSTTHHHHHHHHHHHHHHCCTTCCEEEEE
T ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf 99997312699899999999999853863334544467888999999998644325899999999998289976769998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 g~~~~gk~~~~~~~~~~~~~~~i~in~s~~rs~~~l~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~DeiD~l~~~~dg~~ 240 (362)
T d1svma_ 161 GPIDSGKTTLAAALLELCGGKALNVNLPLDRLNFELGVAIDQFLVVFEDVKGTGGESRDLPSGQGINNLDNLRDYLDGSV 240 (362)
T ss_dssp CSTTSSHHHHHHHHHHHHCCEEECCSSCTTTHHHHHGGGTTCSCEEETTCCCSTTTTTTCCCCSHHHHHHTTHHHHHCSS
T ss_pred CCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCCCCCCCC
T ss_conf 99998889999999998599789997742011888875777799899999876541068997288750731134568860
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~p~i~ttN~~~~~~~r~~Rf~~~i~~~~~~~~~~~~~~l~~i~~~~~l~~~~~~L~~li~~~s~ 320 (362)
T d1svma_ 241 KVNLEKKHLNKRTQIFPPGIVTMNEYSVPKTLQARFVKQIDFRPKDYLKHCLERSEFLLEKRIIQSGIALLLMLIWYRPV 320 (362)
T ss_dssp CEEECCSSSCCEEECCCCEEEEECSCCCCHHHHTTEEEEEECCCCHHHHHHHHTCTHHHHTTCTTCHHHHHHHHHHHSCG
T ss_pred HHHHHHHHHCHHHHCCCCCEEECCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCH
T ss_conf 13444210024553167724650654300122466736886268974789999999984035788888999987368987
Q ss_pred -----------------------------------------E
Q ss_conf -----------------------------------------8
Q 002647 518 -----------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------a 518 (897)
-
T Consensus 321 ~D~~~~i~~~~~~~~~~l~~ei~~~~~~~~k~~I~~Gk~ile 362 (362)
T d1svma_ 321 AEFAQSIQSRIVEWKERLDKEFSLSVYQKMKFNVAMGIGVLD 362 (362)
T ss_dssp GGSCGGGHHHHHHHHHHHHHHCCHHHHHHHHHHHHHTSCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC
T ss_conf 999999999999999987524149999999999976997779
|
| >d2drwa1 e.3.1.1 (A:2-363) D-Amino acid amidase DaaA {Ochrobactrum anthropi [TaxId: 529]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: D-Amino acid amidase DaaA species: Ochrobactrum anthropi [TaxId: 529]
Probab=100.00 E-value=0 Score=27261.03 Aligned_cols=1 Identities=0% Similarity=0.072 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~i~~~~~~~~~~g~~g~~v~v~~~g~~v~~~~~G~ad~~~~~p~t~dt~f~i~SvsK~~ta~~i~~lve~G~l~l 80 (362)
T d2drwa1 1 SDLNNAIQGILDDHVARGVVGVSLALCLPGEETSLYQSGYADKFNKMPMTGDHLFRIASCTKSFIATGLHLLVQDGTVDL 80 (362)
T ss_dssp CHHHHHHHHHHHHHHTTTCCEEEEEEECTTSCEEEEEEEEEETTTTEECCTTCBEECGGGHHHHHHHHHHHHHHTTSCCT
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEEEEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCC
T ss_conf 95789999999999775997289999999999999857882056698799998697115689999999999997699877
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 dd~v~~ylp~~~~~~~iTi~~LL~htSGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~Ysn~~~~llg~ii 160 (362)
T d2drwa1 81 DEPITRWFPDLPKAAQMPVRILLNHRSGLPDFETSMPMISDKSWTAQEIVDFSFRHGVQKEPWHGMEYSNTGYVLAGMII 160 (362)
T ss_dssp TSBGGGTCTTSTTGGGCBGGGGTTTCSCCCCCTTTSBSSCCCCCCHHHHHHHHHHHSCCCCTTSSCCCCSHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCEECCCCHH
T ss_conf 76664420354434332335555326899764332223332321026777766406766532201102454311043022
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 e~~tg~~~~~~~~e~i~~PLgm~~T~~~~~~~~~~~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (362)
T d2drwa1 161 AHETGKPYSDHLRSRIFAPLGMKDTWVGTHETFPIEREARGYMHAAADDENPQWDVSGAGDPVDGVWDSTEWFPLSGANA 240 (362)
T ss_dssp HHHHTSCHHHHHHHHTHHHHTCCSCEETTTCCCCGGGBCCCEEECBTTCCSCSSBCTTCCCCBTTEEECTTTSCHHHHGG
T ss_pred HHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 32057526666678888502876523357311454533310211556555643233345676566334621134445566
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 aGgl~sta~Dla~~~~~ll~~~~l~~~~~~~~~~~~~~~~~~~~~~~~yG~G~~~~~~~~~~~~gH~G~~~G~~s~~~~~ 320 (362)
T d2drwa1 241 AGDMVSTPRDIVKFLNALFDGRILDQKRLWEMKDNIKPAFFPGSNTVANGHGLLLMRYGSSELKGHLGQIPGHTSIMGRD 320 (362)
T ss_dssp GTCEEECHHHHHHHHHHHHTTSSSCHHHHHHHHTSCEECCCTTSCEEEECSSCEEEEETTEEEEEEEEEETTEEEEEEEC
T ss_pred CCCEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCEEEEEEE
T ss_conf 57527189999999999847997899999999974256535799888704369998459941898246578823999999
Q ss_pred -----------------------------------------E
Q ss_conf -----------------------------------------8
Q 002647 518 -----------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------a 518 (897)
-
T Consensus 321 p~~~~~iv~l~N~~~~~~~~~~~~~~~~~~~~il~ai~~~~~ 362 (362)
T d2drwa1 321 EETGAALMLIQNSGAGDFESFYLKGVNEPVDRVLEAIKNSRS 362 (362)
T ss_dssp TTTCCEEEEEESEECSSTTSHHHHTTHHHHHHHHHHHHHHTC
T ss_pred ECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 879989999994999556899999999999999999975649
|
| >d2gjxa1 c.1.8.6 (A:167-528) beta-hexosaminidase A {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-N-acetylhexosaminidase catalytic domain domain: beta-hexosaminidase A species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27260.31 Aligned_cols=1 Identities=0% Similarity=-1.391 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 f~~RG~mlD~aR~~~~~~~lk~~id~ma~~K~N~lhlHltD~~~~r~e~~~~p~l~~~ga~~~~~~~yT~~d~~elv~yA 80 (362)
T d2gjxa1 1 FPHRGLLLDTSRHYLPLSSILDTLDVMAYNKLNVFHWHLVDDPSFPYESFTFPELMRKGSYNPVTHIYTAQDVKEVIEYA 80 (362)
T ss_dssp CSEEEEEEETTTSCCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCBCCSSCTHHHHHHSSCTTTSCBCHHHHHHHHHHH
T ss_pred CCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 98558677638888089999999999998299389999874787600147873144337868878863899999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~rgI~vIPEiD~PGH~~a~~~~~p~l~~~~~~~~~~~~~~~~l~~~~~~t~~f~~~v~~E~~~lF~~~~iHiGgDE~~~ 160 (362)
T d2gjxa1 81 RLRGIRVLAEFDTPGHTLSWGPGIPGLLTPCYSGSEPSGTFGPVNPSLNNTYEFMSTFFLEVSSVFPDFYLHLGGDEVDF 160 (362)
T ss_dssp HHTTCEEEEECCCSSSCTTTTTTSTTCEEEEESSSSEEEEEEEECTTCHHHHHHHHHHHHHHHHHCCSSEEECCCCSCCS
T ss_pred HHCCCEEEECCCCCCHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC
T ss_conf 97598798536665046899874833137665788877755665777377899899999999885146537740540124
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~w~~~p~~~~~~~~~g~~~~~~~l~~~f~~~~~~~l~~~gk~~i~W~d~~~~~~~l~~d~ii~~W~~~~~~~~~~~~~~ 240 (362)
T d2gjxa1 161 TCWKSNPEIQDFMRKKGFGEDFKQLESFYIQTLLDIVSSYGKGYVVWQEVFDNKVKIQPDTIIQVWREDIPVNYMKELEL 240 (362)
T ss_dssp HHHHHCHHHHHHHHHHTCTTCSHHHHHHHHHHHHHHHHTTTCEEEEEHHHHHTTCCCCTTCEEEECCSSSSSCHHHHHHH
T ss_pred CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHH
T ss_conf 43336878899998617788999999999999999999739706744410256777899872564314543668989999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~G~~~i~s~~~yl~~~~~g~~w~~~y~~~p~~~~~~~~~~~~ilG~e~~lW~E~i~~~~l~~~~~PRl~A~AE~~Ws 320 (362)
T d2gjxa1 241 VTKAGFRALLSAPWYLNRISYGPDWKDFYVVEPLAFEGTPEQKALVIGGEACMWGEYVDNTNLVPRLWPRAGAVAERLWS 320 (362)
T ss_dssp HHHTTCEEEECTTCCTTSCBSSCTHHHHHHCCTTCSSCCHHHHTTEEEEEEEECTTSCSTTTHHHHHTTHHHHHHHHHHS
T ss_pred HHHCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 97579859981674256567777656545531036766865650550347770107778510688899799999999859
Q ss_pred -----------------------------------------E
Q ss_conf -----------------------------------------8
Q 002647 518 -----------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~d~~~f~~Rl~~~~~rL~~~Gi~~~p~~~~~c~~~~~~ 362 (362)
T d2gjxa1 321 NKLTSDLTFAYERLSHFRCELLRRGVQAQPLNVGFCEQEFEQ 362 (362)
T ss_dssp CTTCCCHHHHHHHHHHHHHHHHHTTCCCCCSSSCCCSSCCCC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCC
T ss_conf 987889999999999999999977998769998645420329
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=27260.03 Aligned_cols=1 Identities=0% Similarity=-0.925 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~p~~~g~~~~~~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~ 80 (362)
T d1q8ya_ 1 YHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGAN 80 (362)
T ss_dssp CCCCCTTCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHT
T ss_pred CCCCCCCCCCCCCCEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCC
T ss_conf 97888888844785799899750778189999999999799999983431336899999999998401455555422767
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~ 160 (362)
T d1q8ya_ 81 HILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLME 160 (362)
T ss_dssp TBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEE
T ss_pred CEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEE
T ss_conf 64789987631256520234320003542000001223467868999999999999988876405864656770570563
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~ 240 (362)
T d1q8ya_ 161 IVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 240 (362)
T ss_dssp EEETTTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CH
T ss_pred CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCH
T ss_conf 05765644305675314421234454223665210571321466777643201237899999878899898755432102
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rp 320 (362)
T d1q8ya_ 241 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA 320 (362)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCB
T ss_pred HHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCC
T ss_conf 68999999983799878862453220001320122024323577644421000156743589999999998779945790
Q ss_pred -----------------------------------------E
Q ss_conf -----------------------------------------8
Q 002647 518 -----------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------a 518 (897)
-
T Consensus 321 ta~e~L~Hp~f~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 362 (362)
T d1q8ya_ 321 DAGGLVNHPWLKDTLGMEEIRVPDRELYGSGSDIPGWFEEVR 362 (362)
T ss_dssp CHHHHHTCGGGTTCTTCTTCCCTTSCTTCBSTTSTTSSSCCC
T ss_pred CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC
T ss_conf 899996693407898744477998666788899984354409
|
| >d1qjwa_ c.6.1.1 (A:) Cellobiohydrolase II (Cel6) {Trichoderma reesei, Cel6a [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: 7-stranded beta/alpha barrel superfamily: Glycosyl hydrolases family 6, cellulases family: Glycosyl hydrolases family 6, cellulases domain: Cellobiohydrolase II (Cel6) species: Trichoderma reesei, Cel6a [TaxId: 51453]
Probab=100.00 E-value=0 Score=27259.42 Aligned_cols=1 Identities=0% Similarity=-1.656 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~gNPf~g~~~yvnP~y~a~v~~~a~~~~~~~~~~~~~~ia~~Pta~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 80 (362)
T d1qjwa_ 1 ATYSGNPFVGVTPWANAYYASEVSSLAIPSLTGAMATAAAAVAKVPSFMWLDTLDKTPLMEQTLADIRTANKNGGNYAGQ 80 (362)
T ss_dssp CCCSSCTTTTSEECCCHHHHHHHHHHTGGGCCHHHHHHHHHHTTSCCCEEECSGGGHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEE
T ss_conf 97678998897331473058899998751368788999999846780698237788740689999999998726887228
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 lV~Y~iP~RDC~a~ss~G~~~~~~~g~~~Yk~Yid~Ia~~~~~~~~~~~vvIlEPDsL~nlvt~~~~~~c~~~~~~~~~~ 160 (362)
T d1qjwa_ 81 FVVFDLPDRDCAALASNGEYSIADGGVAKYKNYIDTIRQIVVEYSDIRTLLVIEPDSLANLVTNLGTPKCANAQSAYLEC 160 (362)
T ss_dssp EEECCCTTCSTTCSTTCCSCCGGGTHHHHHHHHHHHHHHHHHHTTTSCEEEEECSSSHHHHHHCTTSHHHHTTHHHHHHH
T ss_pred EEEECCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 99936999971444249986656554688999999999999856897439997776066654057844457789999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 l~yAv~~L~~pnv~vYlDaGhsgWlgw~~n~~~~a~~~a~~l~~ag~~~~~rGFatNVSNy~~~~~~~~~~~t~~n~~~~ 240 (362)
T d1qjwa_ 161 INYAVTQLNLPNVAMYLDAGHAGWLGWPANQDPAAQLFANVYKNASSPRALRGLATNVANYNGWNITSPPSYTQGNAVYN 240 (362)
T ss_dssp HHHHHHHTCCTTEEEEEECCCTTTTCSHHHHHHHHHHHHHHHHHTTCCTTEEEEEESTTSCCCSSCSSCCGGGTTCSCCS
T ss_pred HHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999970899748999788776678743214789999999984667542327898556887766677765445675514
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 e~~Y~~~l~~~l~~~G~~~~~fVIDTsRNG~gp~~~~~~g~WCNp~G~glG~~Pt~~t~~~~vDA~lWIK~PGESDG~~~ 320 (362)
T d1qjwa_ 241 EKLYIHAIGPLLANHGWSNAFFITDQGRSGKQPTGQQQWGDWCNVIGTGFGIRPSANTGDSLLDSFVWVKPGGECDGTSD 320 (362)
T ss_dssp HHHHHHHHHHHHHHTTCCSCEEEEECTTCSSSSCSCSSTTCCSSBSSCCCCSCCBSCCCCTTEEEEECCSCTTBCSCCCC
T ss_pred HHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCC
T ss_conf 89999999999985368899989857888999988767888879999847899988999876016898578826777888
Q ss_pred -----------------------------------------E
Q ss_conf -----------------------------------------8
Q 002647 518 -----------------------------------------G 518 (897)
Q Consensus 518 -----------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~D~~c~~~~a~~~aP~AG~Wf~~~f~~Lv~nA~P~~~ 362 (362)
T d1qjwa_ 321 SSAPRFDSHCALPDALQPAPQAGAWFQAYFVQLLTNANPSFL 362 (362)
T ss_dssp TTSTTCCGGGGSTTBCSSCCSTTSBCHHHHHHHHHTCSSCCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
T ss_conf 888777766676567899897777479999999972689779
|
| >d2ozla1 c.36.1.11 (A:1-361) E1-beta subunit of pyruvate dehydrogenase (PP module) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiamin diphosphate-binding fold (THDP-binding) superfamily: Thiamin diphosphate-binding fold (THDP-binding) family: Branched-chain alpha-keto acid dehydrogenase PP module domain: E1-beta subunit of pyruvate dehydrogenase (PP module) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27190.29 Aligned_cols=1 Identities=0% Similarity=-0.925 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~~~lske~ll~~yr~M~~~R~~e~~~~~l~~~g~i~g~~h~~~GqEa~~vg~~~~l~ 80 (361)
T d2ozla1 1 FANDATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGIN 80 (361)
T ss_dssp CCSEEEEECCCCEEESCSCCSCSEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSCCCCCTTCHHHHHHHHHTSC
T ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC
T ss_conf 98876565353302015779988788899999999999999999999999999779875065687877999999998679
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~D~~~~~yR~~~~~la~G~~~~~~~ae~~gk~~g~~~G~~~~~h~~~~~~~~~~~ivg~~~p~A~G~A~a~k~~~~~~v 160 (361)
T d2ozla1 81 PTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSMHMYAKNFYGGNGIVGAQVPLGAGIALACKYNGKDEV 160 (361)
T ss_dssp TTSEEECCSCCHHHHHHTTCCHHHHHHHHTTCTTSTTTTSSCTTCCCBTTBCCCCCSTTTHHHHHHHHHHHHHHHTCCCC
T ss_pred CCCEECCCCCCHHEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCE
T ss_conf 55785144444210223104610223312687565566554400123466667645445655157899997654058976
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~GDGa~~eG~f~Ealn~A~~~~lPvifv~eNN~yaist~~~~~~~~~~~~~~~~~~~~~~vdGnD~~av~~a~~~A 240 (361)
T d2ozla1 161 CLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREATRFA 240 (361)
T ss_dssp EEEEEETTGGGCHHHHHHHHHHHHTTCCEEEEEEECSEETTEEHHHHCSCCCGGGTTTTSCEEEEETTCHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHH
T ss_conf 99972688766763236555554326765899986786667770110354220001365415996267705799999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~R~g~gP~liE~~TyR~~gHs~~D~~~~YR~~~Ei~~~~~k~DPi~~~~~~Li~~g~~se~e~~~i~~ei~~~V~~A 320 (361)
T d2ozla1 241 AAYCRSGKGPILMELQTYRYHGHEMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDA 320 (361)
T ss_dssp HHHHHTTCCCEEEEEECCCSSCSSTTCCSCSSSCHHHHHHHHHHHCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99986069888999865568887666652124777888744413899999999999879999999999999999999999
Q ss_pred ----------------------------------------E
Q ss_conf ----------------------------------------8
Q 002647 518 ----------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------a 518 (897)
.
T Consensus 321 ~~~A~~sp~P~~~~l~~~VYa~~~p~~~~~~~~~~~~~~~~ 361 (361)
T d2ozla1 321 AQFATADPEPPLEELGYHIYSSDPPFEVRGANQWIKFKSVS 361 (361)
T ss_dssp HHHHHHSCCCCGGGTTCSSSSSCCCEEEECSBTTCEEEECC
T ss_pred HHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 99998588969899973216899807877689996116789
|
| >d1x1ia1 a.102.3.2 (A:26-386) Xanthan lyase {Bacillus sp. gl1 [TaxId: 84635]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Chondroitin AC/alginate lyase family: Hyaluronate lyase-like catalytic, N-terminal domain domain: Xanthan lyase species: Bacillus sp. gl1 [TaxId: 84635]
Probab=100.00 E-value=0 Score=27190.05 Aligned_cols=1 Identities=0% Similarity=0.105 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 sdd~~~lr~rw~~~l~g~~~~d~~d~~~~~~l~~l~~~A~~~~~~~~~~~~~~~lW~~l~~~~~~~~l~~~~~rl~~mA~ 80 (361)
T d1x1ia1 1 SDEFDALRIKWATLLTGGPALDPADSDIAARTDKLAQDANDYWEDMDLSSSRTYIWYALRGNGTSDNVNAVYERLRTMAL 80 (361)
T ss_dssp CCHHHHHHHHHHHHHHCCTTCCTTCHHHHHHHHHHHHHHHHHHHHCCCCTTCSCSSGGGCCTTCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 91899999999999708876786768999999999999997787458887766767888766630479999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 Ay~~pgs~ly~d~~l~~~I~~al~~~~~~~y~~~~~~~~~NWW~~eIg~P~~l~~~liLl~d~l~~~~~~~~~~~i~~f~ 160 (361)
T d1x1ia1 81 AATTVGSSLYGNADLKEDILDALDWLYVNSYNSTRSRSAYNWWHWQLGIPMSLNDIAVLLYDDISAARMATYMDTIDYFT 160 (361)
T ss_dssp HHHSTTCTTTTCHHHHHHHHHHHHHHHHHTSSTTSCTTSSSHHHHHTHHHHHHHHHHHHTGGGCCHHHHHHHHHHHHHHC
T ss_pred HHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
T ss_conf 98299985538999999999999999971888888998999125551757999999998514169999999998999857
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 p~~~~TGaN~~d~a~~~~~rglL~~d~~~~~~a~~~i~~~~~~~~v~~gdG~~~DgSf~qH~~~~Y~G~YG~~~l~~~~~ 240 (361)
T d1x1ia1 161 PSIGLTGAARAWQAIVVGVRAVIVKDAVKLAAARNGLSGTGIFPYATGGDGFYADGSFVQHTTFAYTGGYGSSVLETTAN 240 (361)
T ss_dssp CSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTTSTTSSSCCSSSSEECTTSCEEETTTEECTTTHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCCCCEECCCCEECCCCEECCCCCHHHHHHHHHH
T ss_conf 89886530788789999999998469999999999976401305526888651478634257710167533999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~l~gT~~~~~~~~~~~l~~~i~~g~~~~i~~g~~~~~v~GR~ISR~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~ 320 (361)
T d1x1ia1 241 LMYLLSGSTWSVSDPNQSNVWQWIYEAYRPLLYKGAMMDMVRGREISRSYAQDHAVGHGIVASIVRLAQFAPAPHAAAFK 320 (361)
T ss_dssp HHHHHTTSTTCCCCGGGGHHHHHHHHTTGGGEETTEECGGGSGGGGGCTTCCHHHHHHHHHHHHHHHTTTCCTTHHHHHH
T ss_pred HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 99997799887887899999999996002574377016657764014788654457999999999987229999999999
Q ss_pred ----------------------------------------E
Q ss_conf ----------------------------------------8
Q 002647 518 ----------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------a 518 (897)
+
T Consensus 321 ~~~k~~~~~d~~~~~~~~~~~~~~~~~~~ll~d~~i~~~~~ 361 (361)
T d1x1ia1 321 QIAKRVIQEDTFSSFYGDVSTDTIRLAKAIVDDPSIAPAAA 361 (361)
T ss_dssp HHHHHHHHHCCSSCGGGGSCHHHHHHHHHHHTCTTCCCCCC
T ss_pred HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
T ss_conf 99999986076654235887889999999856898897879
|
| >d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Phosphoserine aminotransferase, PSAT species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]
Probab=100.00 E-value=0 Score=27189.90 Aligned_cols=1 Identities=100% Similarity=2.131 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~F~pGP~~vp~~V~eam~~~~~~~~~~~~~~~~~sHRs~ef~~~~~~~r~~l~~l~~~~~~~~i~~~~gs~t~~~ 80 (361)
T d2c0ra1 1 SERAYNFNAGPAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQF 80 (361)
T ss_dssp CCCCEECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHH
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHH
T ss_conf 99873357988188899999999987632146865434576898999999999999999968999878999788725999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ea~~~~l~~~~~~~l~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~tg~~~~~~~i~~ 160 (361)
T d2c0ra1 81 AMIPMNFLKEGQTANYVMTGSWASKALKEAKLIGDTHVAASSEASNYMTLPKLQEIQLQDNAAYLHLTSNETIEGAQFKA 160 (361)
T ss_dssp HHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHSCEEEEEECGGGTTCSCCCGGGCCCCTTEEEEEEESEETTTTEECSS
T ss_pred HHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCEECCEEEE
T ss_conf 99985255689823898404111125555430374012102343333415555542046761489972464125115777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~al~~vDavss~g~~~id~~~~di~~~s~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (361)
T d2c0ra1 161 FPDTGSVPLIGDMSSDILSRPFDLNQFGLVYAGAQKNLGPSGVTVVIVREDLVAESPKHLPTMLRYDTYVKNNSLYNTPP 240 (361)
T ss_dssp CCCCTTSCEEEECTTTTTSSCCCGGGCSEEEEETTTTTCCSSCEEEEEEGGGSSSCCTTSCGGGCHHHHHHTTTCSSCCC
T ss_pred EECCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 30468841899860333320234334325897413345245673799876876627443223324120003331014664
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rS~~~~~~~~~~~~~~~~~~~~L~~~G 320 (361)
T d2c0ra1 241 SFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLASEELEKEFVKASEQEG 320 (361)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSCHHHHHHHHHHHHHTT
T ss_pred CEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 20230115677766502424777789999998756665404654345777431454399997898546999999999788
Q ss_pred ----------------------------------------E
Q ss_conf ----------------------------------------8
Q 002647 518 ----------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------a 518 (897)
|
T Consensus 321 I~~~~G~~~~g~~RIs~~~~~~~edv~~Lv~~l~~~~~~~~ 361 (361)
T d2c0ra1 321 FVGLKGHRSVGGLRASIYNAVPYESCEALVQFMEHFKRSRG 361 (361)
T ss_dssp EESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHHC
T ss_pred CEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 88736988678698870688999999999999999999659
|
| >d1dhsa_ c.31.1.1 (A:) Deoxyhypusine synthase, DHS {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: DHS-like NAD/FAD-binding domain superfamily: DHS-like NAD/FAD-binding domain family: Deoxyhypusine synthase, DHS domain: Deoxyhypusine synthase, DHS species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27188.71 Aligned_cols=1 Identities=0% Similarity=-0.161 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~p~~a~~~v~~~s~~~p~~~~~V~g~df~~~~~~~~ll~~~~~~GFqA~~Lg~A~~i~~~Mi~~~~~~~~~~~~~~~~~~ 80 (361)
T d1dhsa_ 1 APAGALAAVLKHSSTLPPESTQVRGYDFNRGVNYRALLEAFGTTGFQATNFGRAVQQVNAMIEKKLEPLSQDEDQHADLT 80 (361)
T ss_dssp CCHHHHHHHSCCCCCCCTTCCCCCCCCGGGCCCHHHHHHGGGGTCHHHHHHHHHHHHHHHHHHHHTCCC-----------
T ss_pred CCHHHHHCCEECCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 95045424341678899999744178778998999999999873930788999999999998752257765422222234
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~ctIfLt~agam~saGlr~~i~~LIr~g~Vd~IVtTga~lehDi~~~~g~~y~g~f~~dd~~Lr~~ginRIgd 160 (361)
T d1dhsa_ 81 QSRRPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLVTTAGGVEEDLIKCLAPTYLGEFSLRGKELRENGINRIGN 160 (361)
T ss_dssp ------CSSEEEEEECTHHHHSTHHHHHHHHHHTTCCSEEEECHHHHHHHHHTTTSCCEECCTTCCHHHHHHTTEEEETT
T ss_pred CHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCC
T ss_conf 00125666438986144411465799999999859977898068850399999808641076568848876437651220
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 v~Ipee~~~~~e~~i~~il~~~~~e~~~~~~~~~~~e~i~~lg~~i~~~~Sil~~A~~~~vPVf~Pa~~DssiG~~l~~~ 240 (361)
T d1dhsa_ 161 LLVPNENYCKFEDWLMPILDQMVMEQNTEGVKWTPSKMIARLGKEINNPESVYYWAQKNHIPVFSPALTDGSLGDMIFFH 240 (361)
T ss_dssp EEEETHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHCCTTCHHHHHHHTTCCEECTTTTSSHHHHHHHHH
T ss_pred EEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCEECCCCCHHHHHHHHHHH
T ss_conf 63177999999999999999999985404776464999999974268952499999982997654776516699999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~iD~~~D~~~l~~~~~~~~~~G~i~iGGGvpKh~i~~~~l~r~g~dyavqItta~~~dGslSGA~p~EaiSWG 320 (361)
T d1dhsa_ 241 SYKNPGLVLDIVEDLRLINTQAIFAKCTGMIILGGGVVKHHIANANLMRNGADYAVYINTAQEFDGSDSGARPDEAVSWG 320 (361)
T ss_dssp HHHSTTCCCCSHHHHHHHHHHHHTCSSEEEEEESCTHHHHHHHHHHHTTTSBSEEEEECCCCSTTCCSTTCCHHHHHHHT
T ss_pred HHCCCCCEEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 96189953559999999999987466762699959826378776455317998799970799986766689833013057
Q ss_pred ----------------------------------------E
Q ss_conf ----------------------------------------8
Q 002647 518 ----------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------a 518 (897)
-
T Consensus 321 Ki~~~a~~v~V~~DATIv~PLl~a~~~~k~~~~~~~~~~~~ 361 (361)
T d1dhsa_ 321 KIRVDAQPVKVYADASLVFPLLVAETFAQKMDAFMHEKNED 361 (361)
T ss_dssp SBCTTCCCEEECSCHHHHHHHHHHHTGGGGHHHHHHHTTCC
T ss_pred CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 61789883799960779999999999975401124322489
|
| >d1m32a_ c.67.1.3 (A:) 2-aminoethylphosphonate transaminase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: 2-aminoethylphosphonate transaminase species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=0 Score=27187.18 Aligned_cols=1 Identities=0% Similarity=-0.959 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~l~~pGP~~~~~~V~~A~~~~~~~~~~~~~~~~~~~~r~~l~~l~~~~~~~~~i~~t~s~T~~~~~~~~~l~~~~~~~~ 80 (361)
T d1m32a_ 1 YLLLTPGPLTTSRTVKEAMLFDSCTWDDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVL 80 (361)
T ss_dssp CEECSSSSCCCCHHHHHTTCCCCCTTSHHHHTTTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSCCTTCCEE
T ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 95036999877799999851544698868999999999999999829899988999889789999999998654224653
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tG~~~~i~~i~~~~~~~g~~~ 160 (361)
T d1m32a_ 81 IVSNGAYGARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTY 160 (361)
T ss_dssp EEESSHHHHHHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHHTCEE
T ss_pred EEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEE
T ss_conf 01101223457777655301233222234678640256899874247662699843002342011234442211452146
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~vDa~qs~G~~~~d~~~~~~D~~~~s~~K~l~gp~G~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 240 (361)
T d1m32a_ 161 IVDAMSSFGGIPMDIAALHIDYLISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSP 240 (361)
T ss_dssp EEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSSEEEEEEEHHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCC
T ss_pred EEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC
T ss_conf 75200256745532233445268763034533799866789625554100024566432200111011234566678777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~rs~~v~~~~~p~~~~~~~~~~~~~l~~~g 320 (361)
T d1m32a_ 241 THTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALGFNTLLDDELHSPIITAFYSPEDPQYRFSEFYRRLKEQG 320 (361)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCCCTTCCHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCC
T ss_conf 10446899999999985003566788899887777777622875467856649967999899988779999999999889
Q ss_pred ----------------------------------------E
Q ss_conf ----------------------------------------8
Q 002647 518 ----------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------a 518 (897)
.
T Consensus 321 i~i~~G~~~~~~~~Ris~~g~~~~~di~~lv~al~~~L~~~ 361 (361)
T d1m32a_ 321 FVIYPGKVSQSDCFRIGNIGEVYAADITALLTAIRTAMYWT 361 (361)
T ss_dssp EECEECCCSSSCEEEEECCSSCCHHHHHHHHHHHHHHCTTC
T ss_pred CEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 28978986889989984788899999999999999975999
|
| >d1lt7a_ c.1.26.1 (A:) Betaine-homocysteine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Homocysteine S-methyltransferase family: Homocysteine S-methyltransferase domain: Betaine-homocysteine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27183.79 Aligned_cols=1 Identities=0% Similarity=0.936 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
|
T Consensus 1 ~~llerL~~~~ililDGgmGteL~~rG~~~~~~Ws~~~~l~~Pe~V~~iH~~yi~AGAdiI~TNTy~a~~~~l~~~g~~~ 80 (361)
T d1lt7a_ 1 KGILERLNAGEIVIGDGGFVFALEKRGYVKAGPWTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYASEDKLENRGNYV 80 (361)
T ss_dssp CCHHHHHHTTCCEECCTTHHHHHHHHTC-------------CHHHHHHHHHHHHHHTCSEEEEEC---------------
T ss_pred CHHHHHHCCCCEEEEECHHHHHHHHCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHCHHH
T ss_conf 95889862699799978889999977999899988688852959999999999996799998278857879998613266
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~aa~~~a~~~~~~~~~~VaGsigp~~~~~~~~~~~~~~~~~~~q~~~l~~~gvD~il~ETm~~~~Ea~~a 160 (361)
T d1lt7a_ 81 LEKISGQEVNEAAADIARQVADEGDALVAGGVSQTPSYLSAKSETEVKKVFLQQLEVFMKKNVDFLIAEYFEHVEEAVWA 160 (361)
T ss_dssp --------CHHHHHHHHHHHHHTTTCEEEEEECCCHHHHTTCCHHHHHHHHHHHHHHHHHTTCSEEEECCCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 78899999999999998510244321010256678631121104788999999899887504322336777568999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~a~~~~~~Pv~~s~t~~~~g~l~~g~~~e~~~~~~~~~~~~~g~nc~~~p~~~~~~i~~l~~~~~~~~~~~~~~~~p~~ 240 (361)
T d1lt7a_ 161 VETLIASGKPVAATMAIGPEGDLHGVPPGEAAVRLVKAGASIIGVNCHFDPTISLKTVKLMKEGLEAAQLKAHLMSQPLA 240 (361)
T ss_dssp HHHHGGGSSCEEEEECCBTTBSTTSCCHHHHHHHHHHTTCSEEEEESSSCHHHHHHHHHHHHHHHHHTTCCCEEEEECCS
T ss_pred HHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCC
T ss_conf 99986036608898787178863677849999988730620555214554676899999999765541455135404652
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~pn~~~~~~~~~p~~~~~~~~~~~~~~~~~~~a~~~~~~Ga~iIGGCCGttP~HI~~la~~l~~~~~~~~p~~~~~~~ 320 (361)
T d1lt7a_ 241 YHTPDANKQGFIDLPEFPFGLEPRVATRWDIQKYAREAYNLGVRYIGGCCGFEPYHIRAIAEELAPERGFLPPASEKHGS 320 (361)
T ss_dssp BCCTTCCTTCGGGSTTTTTSCGGGBCCHHHHHHHHHHHHHHTCCEECCCTTCCHHHHHHHHHHTHHHHSSCCC-------
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 33778776566789887687665647999999999999987990999898798999999999985145899998888877
Q ss_pred ----------------------------------------E
Q ss_conf ----------------------------------------8
Q 002647 518 ----------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 361 (361)
T d1lt7a_ 321 WGSGLDMHTKPWVRARARKEYWENLRIASGRPYNPSMSKPD 361 (361)
T ss_dssp -------------CTTSCHHHHHHCCCCCSCTTSCSCCCCC
T ss_pred CCCCEECCCCCEECHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 36776426875015446599998626678998881024898
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=0 Score=27181.61 Aligned_cols=1 Identities=0% Similarity=-0.892 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl 80 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL 80 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEC
T ss_conf 97999888767999999999977997899984798644277787653168847998657898999999975799999989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 Aa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~ 160 (361)
T d1kewa_ 81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA 160 (361)
T ss_dssp CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC
T ss_pred CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 60166666775999999999999999999999841222101468549999344101177866775434567887566889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~a 240 (361)
T d1kewa_ 161 YAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240 (361)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEECCCCCCCCHHHHHHHHHHCCCCCEEECCCCEEEECEEHHHHH
T ss_conf 99999899999999999999999968989999138568929985769999999997499817947999689078899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~ai~~~~~~~~~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~P~ 320 (361)
T d1kewa_ 241 RALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISRELGWKPL 320 (361)
T ss_dssp HHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCCHHHHHHHCCCCS
T ss_pred HHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCEEEECHHHHHHHHCCCCC
T ss_conf 99999985698899699899997534777767653001233445676543255689999875531578999998799889
Q ss_pred ----------------------------------------E
Q ss_conf ----------------------------------------8
Q 002647 518 ----------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------a 518 (897)
-
T Consensus 321 ~~l~e~i~~ti~w~~~n~~~~~~~k~~~~~~~~~~~y~~~~ 361 (361)
T d1kewa_ 321 ETFESGIRKTVEWYLANTQWVNNVKSGAYQSWIEQNYEGRQ 361 (361)
T ss_dssp CCHHHHHHHHHHHHHHCHHHHHHSCCHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 89999999999999986998887661778999998515699
|
| >d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Modulator in mal gene expression, MalY species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27181.10 Aligned_cols=1 Identities=0% Similarity=-1.058 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~df~~p~~i~eal~~~~~~~~~~Y~~~~g~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~~l~~~~~~l~~ 80 (361)
T d1d2fa_ 1 LLPFTISDMDFATAPCIIEALNQRLMHGVFGYSRWKNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSE 80 (361)
T ss_dssp CEECCSSSCSSCCCHHHHHHHHHHHTTCCCCCCCSCCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHHSSC
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCC
T ss_conf 92738789799998999999999985788899899898999999999999838999802599908889999987653111
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~~~~~~~~~~~~~i~l~~p~NPTG~~~s~~~~~~i~~ 160 (361)
T d1d2fa_ 81 TGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMAD 160 (361)
T ss_dssp TTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHHHHHHH
T ss_pred CCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHH
T ss_conf 23223233334520368998503437861133332223322211021003677416873044432233320234343200
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~v~~~s~SK~~~~~g~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (361)
T d1d2fa_ 161 LCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSP 240 (361)
T ss_dssp HHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEEEECSHHHHTCGGGCCEEEEECSHHHHHHHHHHHHTTSCCCSC
T ss_pred HHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCC
T ss_conf 11332200010234332323333456532222233333334454444445420034132267888876510223466510
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~gg~~~~~~l~~~~~~~~~~~~~Ll~~~gv~ 320 (361)
T d1d2fa_ 241 SVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDNALQKALIEQEKVA 320 (361)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCCSBCSEEEEECGGGCCCHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCEE
T ss_conf 01247889987503411210133322036778888765310223355567415999983589999999999999869999
Q ss_pred ----------------------------------------E
Q ss_conf ----------------------------------------8
Q 002647 518 ----------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------a 518 (897)
-
T Consensus 321 v~pG~~F~~~~~~~vRis~~~~~e~l~~al~rl~~~l~~lr 361 (361)
T d1d2fa_ 321 IMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINAIRAVR 361 (361)
T ss_dssp CEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHHC
T ss_pred EEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCC
T ss_conf 98360018899987999971899999999999999999619
|
| >d1pe9a_ b.80.1.1 (A:) Pectate lyase {Erwinia chrysanthemi, type A [TaxId: 556]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Single-stranded right-handed beta-helix superfamily: Pectin lyase-like family: Pectate lyase-like domain: Pectate lyase species: Erwinia chrysanthemi, type A [TaxId: 556]
Probab=100.00 E-value=0 Score=27179.31 Aligned_cols=1 Identities=0% Similarity=-1.656 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~s~~~~G~a~~~ggttGG~gg~~g~v~~Vt~l~dL~~al~~~~~p~iI~v~G~I~~~~~~~~~~~~~~~~~ 80 (361)
T d1pe9a_ 1 AELVSDKALESAPTVGWASQNGFTTGGAAATSDNIYIVTNISEFTSALSAGAEAKIIQIKGTIDISGGTPYTDFADQKAR 80 (361)
T ss_dssp CCCCCTTTTCCCCSSSGGGSSSCCCTTTTCCGGGEEEECSHHHHHHHHTTTTSCEEEEECSEEETTTTCCCCSHHHHHHH
T ss_pred CCCCCCCHHHCCCCCCEEECCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCCCCC
T ss_conf 95212111322477634351799876888848779996999999998747997089998549978887443332220223
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~i~v~sn~TI~G~g~~~~i~~~gl~i~~~~~~~NVIiRnl~ir~~~~~~~~~~~~~~~~~~~Dai~i~~~s~~VwIDH~ 160 (361)
T d1pe9a_ 81 SQINIPANTTVIGLGTDAKFINGSLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHV 160 (361)
T ss_dssp SEEECCSSEEEEECTTCCEEESSEEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESC
T ss_pred CEEEECCCCEEEEECCCEEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECC
T ss_conf 15871898579870688489621699850366426999827865575577765668775667873687517743999852
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 s~s~~~~~~~~~~~~~~~~~~~~Dg~~di~~~s~~vTiS~~~f~~h~~~~l~G~~d~~~~~d~g~~~vT~hhN~~~~~~~ 240 (361)
T d1pe9a_ 161 TISDGNFTDDMYTTKDGETYVQHDGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNNVFNRVTE 240 (361)
T ss_dssp EEECTTSCGGGCCEETTEECCCCCCSEEECTTCEEEEEESCEEEEEEECEEESCCTTCHHHHTTCCEEEEESCEEEEEEE
T ss_pred EECCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEECCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEECCCCCCCCC
T ss_conf 74058766533345567630541025875057431373387546877623735677776555786259997854268757
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 R~P~~r~G~~Hv~NNy~~n~~~~~~~~~~y~~~~~~~a~il~E~NyF~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~ 320 (361)
T d1pe9a_ 241 RAPRVRYGSIHSFNNVFKGDAKDPVYRYQYSFGIGTSGSVLSEGNSFTIANLSASKACKVVKKFNGSIFSDNGSVLNGSA 320 (361)
T ss_dssp CSSEESSCEEEEESCEEEEETTCSSSCCCCSEEECTTCEEEEESCEEEEETCCGGGGGGGEEESSCCEEEEESCEETTEE
T ss_pred CCCCEECCEEEEECCEEECCCCCCCCCCCEEEECCCCCEEEEECEEEECCCCCCCCCCCEEECCCCCEEECCCEEECCCC
T ss_conf 68873076489989665368676430001565057887799985088899987553220012178877955882520741
Q ss_pred ----------------------------------------E
Q ss_conf ----------------------------------------8
Q 002647 518 ----------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~~~~~~~~~py~y~~~~~a~~v~~~V~~~AGaGkl 361 (361)
T d1pe9a_ 321 VDLSGCGFSAYTSKIPYIYDVQPMTTELAQSITDNAGSGKL 361 (361)
T ss_dssp CCCTTSSCBCCCSCCCSCCCCCCCCHHHHHHHHHHCSTTCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
T ss_conf 23368765555667875210456257788988744798879
|
| >d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Archaeon Pyrococcus woesei [TaxId: 2262]
Probab=100.00 E-value=0 Score=27178.37 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~q~f~w~~~~~~~~~~gi~~kLdylk~LGv~~Iwl~Pv~~~~~~~~~~gY~~~dy~~~~~~~~~~~vd 80 (361)
T d1mxga2 1 AKYLELEEGGVIMQAFYWDVPGGGIWWDHIRSKIPEWYEAGISAIWLPPPSKGMSGGYSMGYDPYDYFDLGEYYQKGTVE 80 (361)
T ss_dssp CCSSCGGGTCCEEECCCTTCCCSSCHHHHHHHHHHHHHHHTCCEEECCCCSEETTGGGCCSSSEEETTCSSCSCBTTBSS
T ss_pred CCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 93124455887999452687887855999999789999649998996957407999889998865665567543456778
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~Gt~~d~~~LV~~aH~~GikVIlD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (361)
T d1mxga2 81 TRFGSKEELVRLIQTAHAYGIKVIADVVINHRAGGDLEWNPFVGDYTWTDFSKVASGKYTANYLDFHPNELHCCDEGTFG 160 (361)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEECCSBCCCCEEEEETTTTEEEEEECTTCTTCCSCCCGGGBSSSSSCSCCSCCCT
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 78899999999999999779979998603255577656577666556545665567888766555676666554223456
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~giDGfR~Daa~~v~~~f~~~~~~~~~~~~~gE~~~~~~~~~~~~~~~~~~ 240 (361)
T d1mxga2 161 GFPDICHHKEWDQYWLWKSNESYAAYLRSIGFDGWRFDYVKGYGAWVVRDWLNWWGGWAVGEYWDTNVDALLSWAYESGA 240 (361)
T ss_dssp TSCBBCTTSHHHHHHHTSSTTSHHHHHHHTTCCEEEETTGGGSCHHHHHHHHHHHCCCEEECCCCSCHHHHHHHHHHHTS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHCCHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHCCCC
T ss_conf 76423677605689999999987655441687604505421199999987775168733256346788998655532688
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~df~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fl~NHD~~R~~~~~~a~a~llt~pGiP~iyYGd~~~~ 320 (361)
T d1mxga2 241 KVFDFPLYYKMDEAFDNNNIPALVYALQNGQTVVSRDPFKAVTFVANHDTDIIWNKYPAYAFILTYEGQPVIFYRDFEEW 320 (361)
T ss_dssp EEECHHHHHHHHHHHTTTCHHHHHHHHHTTCSSTTTCTTTEEEESCCSSCCCCSCHHHHHHHHHHSSSEEEEEHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHEEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCC
T ss_conf 43041589999999944983789999862521025798781336736678010158999999982899017885897566
Q ss_pred ----------------------------------------E
Q ss_conf ----------------------------------------8
Q 002647 518 ----------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~~l~~~~~~~~~g~~~~~~~~~d~~~f~R~gd~~~ 361 (361)
T d1mxga2 321 LNKDKLINLIWIHDHLAGGSTTIVYYDNDELIFVRNGDSRR 361 (361)
T ss_dssp SCHHHHHHHHHHHHHTCCSCEEEEEECSSEEEEEECCCSSC
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCC
T ss_conf 77079999999999716798478987799899996788889
|
| >d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Adenine nucleotide alpha hydrolase-like superfamily: Nucleotidylyl transferase family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain domain: Methionyl-tRNA synthetase (MetRS) species: Pyrococcus abyssi [TaxId: 29292]
Probab=100.00 E-value=0 Score=27184.75 Aligned_cols=1 Identities=0% Similarity=-2.021 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~v~~~~P~p~G~lHiGH~~~~~i~~Dil~R~~r~~G~~V~~v~g~D~~g~~i~~~A~~~g~~~~~~~~~~~~~~~~ 80 (361)
T d1rqga2 1 MVRYMVTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEDVVFICGTDEHGTPISFRALKEGRSPREIVDEFHEQIKI 80 (361)
T ss_dssp CCEEEEEECCCBTTSCCBHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEEBCCSHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCC
T ss_conf 96599944898889873456445629999999999981599267158537650999999998299999999999986000
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~f~~~~~~ 160 (361)
T d1rqga2 81 TFQRAKISFDFFGRTELPIHYKLSQEFFLKAYENGHLVKKVTKQAYCEHDKMFLPDRFAICGRPISFRDSAHYYIKMQDF 160 (361)
T ss_dssp HHHHHTCCCSEEEETTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEBTTTTBCCCGGGTTTCCBCEEEEEEEEEECGGGT
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCEECCCCCCCCCCCCCCCCCCEEEEECCHH
T ss_conf 00001222233544566002344553443101368533124664100022011033213589954310263478750113
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~d~~isr~~~wg~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 240 (361)
T d1rqga2 161 AERLKRWIEKQPWKPNVKNMVLSWIEEGLEERAITRDLNWGIPVPLDEEDMKGKVLYVWFEAPIGYISITIEHFKRIGKP 240 (361)
T ss_dssp HHHHHHHHHSSCCCHHHHHHHHHHHTTCCCCEECEECCSSSCBCSCCCSSSTTCEECHHHHGGGHHHHHHHHHHHHTTCT
T ss_pred HHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCH
T ss_conf 54432101335433210345542002023333333346435667654346788278750345546564566676667733
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~G~KMSKSlGN~I~~ 320 (361)
T d1rqga2 241 NEWKKYWLNIDGQTRVIHFIGKDNIPFHAIFWPAFLMAYGKYKDEEVEAEWNLPYDIPANEYLTLEGKKFSTSRNWAIWV 320 (361)
T ss_dssp TTTHHHHBCSSCCEEEEEEEEGGGHHHHHTHHHHHHHTTCCBCSSSCCBCBCCCSBCCEECCEEETTEECBTTTTBSCBH
T ss_pred HHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCEECCCCCCCCCCH
T ss_conf 57777654016886348734655533100148999998632565542014778978897023975898668779988788
Q ss_pred ----------------------------------------E
Q ss_conf ----------------------------------------8
Q 002647 518 ----------------------------------------G 518 (897)
Q Consensus 518 ----------------------------------------a 518 (897)
-
T Consensus 321 ~d~i~~yg~D~lR~~l~~~~p~~~d~dfs~~~~~~~~n~~~ 361 (361)
T d1rqga2 321 HEFLDVFPADYLRYYLTTIMPETRDSDFSFSDFKVRINEEL 361 (361)
T ss_dssp HHHTTTSCHHHHHHHHHHTCCSSSCEEECHHHHHHHHHHTT
T ss_pred HHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCC
T ss_conf 99998868089999999608888999889999999864589
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=100.00 E-value=0 Score=27107.86 Aligned_cols=1 Identities=0% Similarity=-1.157 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~fSP~dG~~~a~~~~g~v~v~d~~~~~~~~~~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~~ 80 (360)
T d1k32a3 1 SIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEK 80 (360)
T ss_dssp ECGGGGEEEEEECGGGCEEEEETTEEEEECTTSSBEEECSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred CCCHHHCCCCCCCCCCEEEEEECCEEEEEECCCCCEEECCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEE
T ss_conf 98601005146889999999989969999899994899169998888999899999999992899899999899994887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~ 160 (360)
T d1k32a3 81 FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQA 160 (360)
T ss_dssp CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEE
T ss_pred EECCCCEEEEEEECCCCCCCCEECCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHCCCEEEEEEECCCCCCCEEECCCCC
T ss_conf 50897127741211454321000111110000012221000000135520230121322566521233121100025654
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 240 (360)
T d1k32a3 161 IHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSM 240 (360)
T ss_dssp EEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGG
T ss_pred EEEECCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEECCCCCCCCEEECCCCCEEEEECCCCCCCCCEECCCCC
T ss_conf 26630455713530354322110012577999999959985575333544023203641179852469601206877767
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~v~~~ 320 (360)
T d1k32a3 241 TSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVKNNLTDL 320 (360)
T ss_dssp SCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEEEEEEEEEE
T ss_pred CCCCCCEEECCCCCCEEECCCCCCCEEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEE
T ss_conf 15531136526654001012476752675413898569999735997069996489987999979997498864886879
Q ss_pred ---------------------------------------E
Q ss_conf ---------------------------------------8
Q 002647 518 ---------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------a 518 (897)
+
T Consensus 321 ~~SpDG~~l~~~~~Dg~i~v~d~~~~~~~~~~~~d~~~~~ 360 (360)
T d1k32a3 321 RLSADRKTVMVRKDDGKIYTFPLEKPEDERTVETDKRPLV 360 (360)
T ss_dssp EECTTSCEEEEEETTSCEEEEESSCTTSCEECCCCSSCEE
T ss_pred EECCCCCEEEEEECCCEEEEEECCCCCCCEEEEECCCCCC
T ss_conf 9999898999997899499999999985459984162259
|
| >d1sq1a_ d.258.1.1 (A:) Chorismate synthase, AroC {Campylobacter jejuni [TaxId: 197]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Chorismate synthase, AroC superfamily: Chorismate synthase, AroC family: Chorismate synthase, AroC domain: Chorismate synthase, AroC species: Campylobacter jejuni [TaxId: 197]
Probab=100.00 E-value=0 Score=27116.89 Aligned_cols=1 Identities=100% Similarity=1.633 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 mntfG~~~r~tt~GESHG~~lg~vidG~PaGl~i~~e~I~~~L~RR~pg~~~~t~R~E~D~veilSGv~~G~TtG~PI~~ 80 (360)
T d1sq1a_ 1 MNTFGTRLKFTSFGESHGVAVGCIIDGMPAGVKFDEEFLQNELDKRKGGSKFATPRKESDKAQVLSGVFEGYTTGHPIAI 80 (360)
T ss_dssp CCEECSSSEEEEECCGGGSCEEEEEECCCSSCBCCHHHHHHHHHHTTC-----------CCEEECSSEETTEECSSCEEE
T ss_pred CCCCCCCEEEEEEECCCCCEEEEEEECCCCCCEECHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCEECCCEEEE
T ss_conf 98775523898525578884489993409588609999999996179999889867888717992263689876750078
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~I~N~d~~s~dy~~~~~~pRPGHAD~~~~~KYg~~D~RgggRsSaReTa~rVaaGaiAk~lL~~~gI~v~s~v~~IG~~~ 160 (360)
T d1sq1a_ 81 VVFNENAHSKDYDNLKDLFRPAHADFTYFYKYGIRDHRGGGRSSARESVARVAGGAVAAMLLREFDICVQSGVFGVGTFV 160 (360)
T ss_dssp EEC----------------------------------------CCCTHHHHHHHHHHHHHHHHTTTCEEEEEEEEETTEE
T ss_pred EEECCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEEEEEE
T ss_conf 88716787310466623678750777876553985776887515999999999999999999862100666788996661
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~s~vrc~d~~~~~~m~~~I~~ak~~gDSvGG~ve~~~~gvP~GLG~p~fdkLda~LA~A~mSIpAv 240 (360)
T d1sq1a_ 161 SNLKEEEFDFEFAKKSEIFCLDPKLESDFKNEILNARNSKDSVGAAVFTKVSGMLIGLGEVLYDKLDSKLAHALMGINAV 240 (360)
T ss_dssp CCSCGGGSCHHHHHHSTTCBSCTTTHHHHHHHHHHHHHTTCCCCEEEEEEEESCCBSCSBTTTBCHHHHHHHHHHTSTTE
T ss_pred CCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCEECCCCCHHHHHHHHCCCCC
T ss_conf 47776646877732573347546778999999999854578763189999846997648601365135888777336310
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 KGVE~G~Gf~~a~~~GSe~nD~~~~~~~~tN~~GGi~GGiSnG~pi~~rva~KP~sSi~k~q~TVd~~~~~~~~~~~gRh 320 (360)
T d1sq1a_ 241 KAVEIGEGINASKMRGSCNNDALKDGKFLSNHSGGILGGISNGENLILKTYFKPTPSIFAKQESIDKFGNNLKFELKGRH 320 (360)
T ss_dssp EEEEETTGGGGGGSCHHHHCCCCSSSSCSCCTTCSEETTEEBSSCEEEEEEECCCC---------------------CCS
T ss_pred EEEEECCCHHHHHHHHHHCCCHHHCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCC
T ss_conf 01530565565420066462222136644456786000235888628999978875567753222178988788557877
Q ss_pred ---------------------------------------E
Q ss_conf ---------------------------------------8
Q 002647 518 ---------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------a 518 (897)
|
T Consensus 321 Dpc~vprA~~V~Eam~a~vlad~~L~~~~~~~~~~~~~~g 360 (360)
T d1sq1a_ 321 DPCVGVRGSVVASAMVRLVLADCLLLNASANLNNLKNAYG 360 (360)
T ss_dssp CSCTHHHHHHHHHHHHHHHHHHHHHHTGGGSHHHHHHHTC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
T ss_conf 8707165049999999999999999845779999875449
|
| >d1qo5a_ c.1.10.1 (A:) Fructose-1,6-bisphosphate aldolase {Human (Homo sapiens), liver isozyme [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Aldolase family: Class I aldolase domain: Fructose-1,6-bisphosphate aldolase species: Human (Homo sapiens), liver isozyme [TaxId: 9606]
Probab=100.00 E-value=0 Score=27115.99 Aligned_cols=1 Identities=0% Similarity=-0.858 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~e~~~eL~~~a~~~~~~GKGiLAaDeS~gT~~Krl~~igventeenr~~yR~~l~tt~~~~~~~IsGvILfe 80 (360)
T d1qo5a_ 1 AHRFPALTQEQKKELSEIAQSIVANGKGILAADESVGTMGNRLQRIKVENTEENRRQFREILFSVDSSINQSIGGVILFH 80 (360)
T ss_dssp CCSSCSSCHHHHHHHHHHHHHHSTTSCEEEEECCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTSCGGGGGTEEEEEECT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHCCEEEEECCH
T ss_conf 99877689999999999999981489879982689983777898769999779999998888518703435656898369
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 eTl~q~~~~g~~~~~ll~~kGIvPgIKVDkGl~~l~~~~ge~~t~gLdgL~~Rl~~y~~~Ga~faKwRaVi~i~~~~ps~ 160 (360)
T d1qo5a_ 81 ETLYQKDSQGKLFRNILKEKGIVVGIKLDQGGAPLAGTNKETTIQGLDGLSERCAQYKKDGVDFGKWRAVLRIADQCPSS 160 (360)
T ss_dssp TGGGCBCTTSCBHHHHHHHTTCEEEEECCCCEEECTTSSSCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCBTTBSCH
T ss_pred HHHHHHCCCCCCHHHHHHHCCCEEEEECCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCH
T ss_conf 99841423677466899865963578348750007667765335662018899999986474445212200245577745
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~I~~na~~laryA~i~q~~GLVPIVEPEVlidg~h~~e~~~~vt~~vl~~l~~~l~~~~V~LeG~lLKpnMv~pG~~~~ 240 (360)
T d1qo5a_ 161 LAIQENANALARYASICQQNGLVPIVEPEVIPDGDHDLEHCQYVTEKVLAAVYKALNDHHVYLEGTLLKPNMVTAGHACT 240 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCBCCCCCTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf 88999999999999999971976431433245788746889999999999999887652134678742001025511055
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~va~~Tv~~l~~~vp~~VpgIvfLSGGqS~eeAt~~LnamN~~~~~~pW~lsfSygRALQ~s~Lk~W~g~~~n~ 320 (360)
T d1qo5a_ 241 KKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAANK 320 (360)
T ss_dssp CCCCHHHHHHHHHHHHHHHSCTTCCEEEEBCTTCCHHHHHHHHHHHHHCSSCCCSEEEEEESGGGTHHHHHHHTTCGGGH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCHHH
T ss_conf 55787888899887764303667871001688744888999999986157899976899643756189999857881428
Q ss_pred ---------------------------------------E
Q ss_conf ---------------------------------------8
Q 002647 518 ---------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------a 518 (897)
+
T Consensus 321 ~~aQ~~~~~ra~~Ns~A~~G~y~~~~~~~~~~~~~lfva~ 360 (360)
T d1qo5a_ 321 EATQEAFMKRAMANCQAAKGQYVHTGSSGAASTQSLFTAC 360 (360)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCCCCSCCCHHHHSCCSSCC
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCC
T ss_conf 9999999999986068756740788887865443003139
|
| >d1bjna_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Phosphoserine aminotransferase, PSAT species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27113.34 Aligned_cols=1 Identities=100% Similarity=2.696 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~nF~pGP~~~p~~Vl~a~~~~~~~~~~~~~~~~~~sHRs~ef~~l~~~~r~~l~~l~~~~~~~~v~~~~gs~t~~~~a 80 (360)
T d1bjna_ 1 QIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAA 80 (360)
T ss_dssp CCEECCSSSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHH
T ss_pred CEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHH
T ss_conf 93774798858899999999998751024686543457678899999999999999996899997799978826888863
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~t~~~~~~~~i 160 (360)
T d1bjna_ 81 VPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIAIDET 160 (360)
T ss_dssp HHHHHCTTCCEEEEEESSHHHHHHHHHHTTTSEEEEEECEEEETTEEEECCGGGCCCCSSCSCEEECSEETTTTEECCCC
T ss_pred HHHCCCCCCCCCCEECCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCE
T ss_conf 00102566543330035630344687776417632121012477764035666412577604999655555457652100
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~v~vDa~~~~~~~~vd~~~~dv~~~ss~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (360)
T d1bjna_ 161 PDFGADVVVAADFSSTILSRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNGSMFNTPP 240 (360)
T ss_dssp CCCCTTCCEEEECTTTTTSSCCCGGGCSEEEEETTTTTSSTTCEEEEEEGGGCSCCCTTSCGGGCHHHHHHTTTCSSCCC
T ss_pred ECCCCCCEEEEEEECCCCCEEEEECCCEEEEEECCCCCCCCCCCEEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 01244522565662352424436513305999726665447776267641012211446774112678876532024444
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rs~~v~~f~~~~~~~~~~~~~~l~~~Gi 320 (360)
T d1bjna_ 241 TFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSDFYRNDVAKRNRSRMNVPFQLADSALDKLFLEESFAAGL 320 (360)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEECCBCGGGBCSSEEEEEESSGGGHHHHHHHHHHTTE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCC
T ss_conf 30278889999988641068999999999999988755335430125774344523999875885249999999997898
Q ss_pred ---------------------------------------E
Q ss_conf ---------------------------------------8
Q 002647 518 ---------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------a 518 (897)
|
T Consensus 321 ~~~~G~~~~g~~Ris~~~~~t~edV~~li~~l~e~~~~~~ 360 (360)
T d1bjna_ 321 HALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRHG 360 (360)
T ss_dssp ECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHHC
T ss_pred EEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 7634877567388983488999999999999999999739
|
| >d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Bacillus alcalophilus [TaxId: 1445]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Phosphoserine aminotransferase, PSAT species: Bacillus alcalophilus [TaxId: 1445]
Probab=100.00 E-value=0 Score=27112.82 Aligned_cols=1 Identities=0% Similarity=-0.493 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~nF~pGP~~~p~~V~~a~~~~~~~~~~~~~~~~~~sHRs~~~~~~~~~~r~~l~~l~~~~~~~~i~~~~gt~~~~~ 80 (360)
T d1w23a_ 1 VKQVFNFNAGPSALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQF 80 (360)
T ss_dssp CCCCEECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHH
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHH
T ss_conf 98436707988488999999999998753046865434576788999999999999999968999878999478489999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~~~~~i~~ 160 (360)
T d1w23a_ 81 TMLPMNLLTKGTIGNYVLTGSWSEKALKEAKLLGETHIAASTKANSYQSIPDFSEFQLNENDAYLHITSNNTIYGTQYQN 160 (360)
T ss_dssp HHHHHHHCCTTCEEEEEECSHHHHHHHHHHHTTSEEEEEEECGGGTSCSCCCGGGCCCCTTEEEEEEESEETTTTEECSS
T ss_pred HHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHCCCCCCCCEEEECCCCCCCCEEEEE
T ss_conf 99876411467654155324123334788777640201202444453201112200335553213754881665104432
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~g~l~ivDavqs~g~~~id~~~~~vd~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (360)
T d1w23a_ 161 FPEINHAPLIADMSSDILSRPLKVNQFGMIYAGAQKNLGPSGVTVVIVKKDLLNTKVEQVPTMLQYATHIKSDSLYNTPP 240 (360)
T ss_dssp CCCCCSSCEEEECTTTTTSSCCCGGGCSEEEEETTTTTSCTTCEEEEEEHHHHCSCCTTCCGGGCHHHHHHTTTCSSCCC
T ss_pred CCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECHHHHCCCCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 21463036986113453432243565542488504434457765046703434313445774200124543100013331
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rS~~vvsf~i~~~~~~~~~~~~l~~~G 320 (360)
T d1w23a_ 241 TFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRNEELNQQFLAKAKEQG 320 (360)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEEECSSHHHHHHHHHHHHHTT
T ss_pred CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCEEEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 20120015778777641004899999999999888887633520036888201640699998599735999999999789
Q ss_pred ---------------------------------------E
Q ss_conf ---------------------------------------8
Q 002647 518 ---------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------a 518 (897)
|
T Consensus 321 I~~~~G~~~~ggiRiS~~~~~t~e~V~~Li~~~~~~~~~~ 360 (360)
T d1w23a_ 321 FVGLNGHRSVGGCRASIYNAVPIDACIALRELMIQFKENA 360 (360)
T ss_dssp EESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHC
T ss_pred CEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCC
T ss_conf 8665077766717899508999999999999999998559
|
| >d1jdwa_ d.126.1.2 (A:) L-arginine: glycine amidinotransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Pentein, beta/alpha-propeller superfamily: Pentein family: Amidinotransferase domain: L-arginine: glycine amidinotransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27110.92 Aligned_cols=1 Identities=0% Similarity=-0.692 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~vn~~sE~~~Lk~VivGr~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ea~ee~d~l~~~Le~~GV~V~r 80 (360)
T d1jdwa_ 1 CPVSSYNEWDPLEEVIVGRAENACVPPFTIEVKANTYEKYWPFYQKQGGHYFPKDHLKKAVAEIEEMCNILKTEGVTVRR 80 (360)
T ss_dssp CCCBBCBSSSCEEEEEECBCTTCBCCCCCHHHHTTSCGGGHHHHHHHTTSBSCHHHHHHHHHHHHHHHHHHHHTTCEEEC
T ss_pred CCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 99722767463739999517767799976221347856665542332146455999999999999999999876967861
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 p~~~~~~~~~~~~~~~~~~~~~~~~RD~~~~ig~~~i~~~~~~~~r~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (360)
T d1jdwa_ 81 PDPIDWSLKYKTPDFESTGLYSAMPRDILIVVGNEIIEAPMAWRSRFFEYRAYRSIIKDYFHRGAKWTTAPKPTMADELY 160 (360)
T ss_dssp CCCCCTTCEEECSSCEEECCCBCCHHHHEEEEBTEEEECCBSCGGGTTGGGGTHHHHHHHHHTTCEEEECCCCCCCGGGB
T ss_pred CCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCC
T ss_conf 46233310101000003675545476202663794233333456553524454157887514675304435543345333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~H 240 (360)
T d1jdwa_ 161 NQDYPIHSVEDRHKLAAQGKFVTTEFEPCFDAADFIRAGRDIFAQRSQVTNYLGIEWMRRHLAPDYRVHIISFKDPNPMH 240 (360)
T ss_dssp CTTCCCSSHHHHHHHHHHTCCSBCSSSCCBCGGGEEEETTEEEECCCSSCCHHHHHHHHHHHTTTCEEEECCBSSCCSSC
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEECCCEEECCCCEEECCCCEEECCCCCCCHHHHHHHHHHCCCCCCEEECCCCCHHHCC
T ss_conf 45544544454321112463254055125425420111652120234422135899998644665311102336733327
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 lD~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~N~LsI~p~~Vi~~~~n~~~~~~L 320 (360)
T d1jdwa_ 241 IDATFNIIGPGIVLSNPDRPCHQIDLFKKAGWTIITPPTPIIPDDHPLWMSSKWLSMNVLMLDEKRVMVDANEVPIQKMF 320 (360)
T ss_dssp STTTEEEEETTEEEECTTSCBTTHHHHHHTTCEEECCCCCCCCTTSCCSSSCGGGGGCCEEEETTEEEEETTCHHHHHHH
T ss_pred CCCEEEEECCCCEEEECCCCCHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHCCEEEEEEECCCEEEECCCCHHHHHHH
T ss_conf 66226871587189951336355531332585358535223454542153453051589997699999908889999999
Q ss_pred ---------------------------------------E
Q ss_conf ---------------------------------------8
Q 002647 518 ---------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------a 518 (897)
-
T Consensus 321 ~~~Gi~vi~i~~~e~~~~~GG~~CmT~pl~Reg~~e~y~~ 360 (360)
T d1jdwa_ 321 EKLGITTIKVNIRNANSLGGGFHCWTCDVRRRGTLQSYLD 360 (360)
T ss_dssp HHTTCEEEEECCHHHHTTTCCTTTTEEEEEESCCCCCSCC
T ss_pred HHCCCEEEEECHHHHHCCCCCCEEECCCEEECCCCCCCCC
T ss_conf 9888989992626543159997384725087786554669
|
| >d1xfia_ e.50.1.1 (A:) Hypothetical protein At2g17340 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: AF1104-like superfamily: AF1104-like family: AF1104-like domain: Hypothetical protein At2g17340 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=0 Score=27110.66 Aligned_cols=1 Identities=0% Similarity=-0.958 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~v~~pll~~~~~~~y~~~tv~~~~~~~~~~~~~~~~~~Wl~~f~~~i~~~~~~A~s~~~~~da~~Ra~~f~~~y~~~L~ 80 (360)
T d1xfia_ 1 EMVPFPQLPMPIENNYRACTIPYRFPSDDPKKATPNEISWINVFANSIPSFKKRAESDITVPDAPARAEKFAERYAGILE 80 (360)
T ss_dssp CCBCCTTSCSCCTTTCCSBCSCCCCTTSCTTSCCHHHHHHHHHHHTTHHHHHHHHHTCTTSTTHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 97566466774213766887788887555221526677999999977889999985089999889999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~l~~~p~~~g~~~~~~ll~~~re~~Lr~~Gf~DpY~~~K~~eN~~Al~~lp~~~~~id~i~d~~~~l~~~vr~aiAGNif 160 (360)
T d1xfia_ 81 DLKKDPESHGGPPDGILLCRLREQVLRELGFRDIFKKVKDEENAKAISLFPQVVSLSDAIEDDGKRLENLVRGIFAGNIF 160 (360)
T ss_dssp HHHHCTTGGGCSCCHHHHHHHHHHHHHHTTCSCTTHHHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHC
T ss_pred HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99848765576017889999999999976999800999999999999987999999753016079999999999987764
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 D~Ga~~~~~~~~~~~~~~~~~~~~~~~rp~~vDd~d~~~~rl~~~~~k~vly~~DNaGe~Vfd~lL~~~rell~~g~~V~ 240 (360)
T d1xfia_ 161 DLGSAQLAEVFSRDGMSFLASCQNLVPRPWVIDDLENFQAKWINKSWKKAVIFVDNSGADIILGILPFARELLRRGAQVV 240 (360)
T ss_dssp ---------------CCHHHHTTCSCCSSCSEECHHHHHHHHTTTCCCEEEEECCBTTHHHHHTHHHHHHHHHHTTCEEE
T ss_pred HCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 30220021444046426999999854589753669999998735775407999358734999887899999965898499
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 l~v~~~PilNDvT~~El~~~~~~~~~~~~~~~gld~~~~~Vv~sG~~~Pg~dL~~~s~E~~~~~~~aDLVI~KGMGr~~~ 320 (360)
T d1xfia_ 241 LAANELPSINDITCTELTEILSQLKDENGQLLGVDTSKLLIANSGNDLPVIDLSRVSQELAYLSSDADLVIVEGMGRGIE 320 (360)
T ss_dssp EEEBSSCCTTBCBHHHHHHHHHHHC--CCEETTEECTTEEEEECCCCSSSCCTTSBCHHHHHHHTTCSEEEEESHHHHTT
T ss_pred EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHCCHHHHHHHHCCCEEEECCCCCHHH
T ss_conf 99888752336249999999998751205765202135189657999887185768999999983699999828751132
Q ss_pred ---------------------------------------E
Q ss_conf ---------------------------------------8
Q 002647 518 ---------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------a 518 (897)
+
T Consensus 321 tN~~a~f~c~~lkL~~vK~~~vA~~lGg~~~d~V~k~~~~ 360 (360)
T d1xfia_ 321 TNLYAQFKCDSLKIGMVKHLEVAEFLGGRLYDCVFKFNEV 360 (360)
T ss_dssp BSTTCCCSSEEEEEEECCCHHHHHHHTCCTTCEEEEEECC
T ss_pred CCCHHHCCCCEEHHHHHCCHHHHHHHCCCCCCEEEEECCC
T ss_conf 0101322788103334258999999499611279982479
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=100.00 E-value=0 Score=27106.03 Aligned_cols=1 Identities=0% Similarity=0.437 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~W~~~w~~~a~~~~~~a~~~~~~g~~~~A~~~~~~A~~~~~~a~~~~~ 80 (360)
T d2jbwa1 1 KPEDEMDNWGRLILDGVSYSDMVGARDRPKEITWFDYWMSLANEYEQEAERKVALGHDLSAGELLMSAALCAQYAQFLWF 80 (360)
T ss_dssp CHHHHHCCHHHHHHHTCCHHHHHHHHTCCTTSCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 92658888776761797589998630689942799999999999999999999769987899999999999997356557
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~v~ip~dg~~l~g~l~~P~~~~~~P~Vi~~hG~~~~~e~~~~~~~~l~~~G~~ 160 (360)
T d2jbwa1 81 DERRQKGQARKVELYQKAAPLLSPPAERHELVVDGIPMPVYVRIPEGPGPHPAVIMLGGLESTKEESFQMENLVLDRGMA 160 (360)
T ss_dssp STHHHHHHHHHHHHHHHHGGGSSSCEEEEEEEETTEEEEEEEECCSSSCCEEEEEEECCSSCCTTTTHHHHHHHHHTTCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCE
T ss_conf 93677899999999999986479873996357677666239993699999529999379876477899999999966998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 vl~~D~~G~G~s~~~~~~~~~~~~~~~~v~d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~~pri~a~V~~~~~~~~~~ 240 (360)
T d2jbwa1 161 TATFDGPGQGEMFEYKRIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEPRLAACISWGGFSDLDY 240 (360)
T ss_dssp EEEECCTTSGGGTTTCCSCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCTTCCEEEEESCCSCSTT
T ss_pred EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCHHH
T ss_conf 99971642223576555656699999999999996600155553423331050999987515987554999746555777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~vp~~~~~~l~~~~~~~~~~l~~~~~g 320 (360)
T d2jbwa1 241 WDLETPLTKESWKYVSKVDTLEEARLHVHAALETRDVLSQIACPTYILHGVHDEVPLSFVDTVLELVPAEHLNLVVEKDG 320 (360)
T ss_dssp GGGSCHHHHHHHHHHTTCSSHHHHHHHHHHHTCCTTTGGGCCSCEEEEEETTSSSCTHHHHHHHHHSCGGGEEEEEETTC
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf 75433456677777506873577889877406645467527999899972999928999999999657998599997999
Q ss_pred ---------------------------------------E
Q ss_conf ---------------------------------------8
Q 002647 518 ---------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------a 518 (897)
-
T Consensus 321 ~H~~~~~~~~~~~~i~dWl~~~L~~g~~~apt~~~~p~~~ 360 (360)
T d2jbwa1 321 DHCCHNLGIRPRLEMADWLYDVLVAGKKVAPTMKGWPLEH 360 (360)
T ss_dssp CGGGGGGTTHHHHHHHHHHHHHHTSSCCCCCCEESCSCC-
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 9677767579999999999998314897899877788889
|
| >d1oxwa_ c.19.1.3 (A:) Patatin {Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FabD/lysophospholipase-like superfamily: FabD/lysophospholipase-like family: Patatin domain: Patatin species: Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]
Probab=100.00 E-value=0 Score=27108.29 Aligned_cols=1 Identities=0% Similarity=-0.560 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~v~iLsldGGG~rG~~~~~vL~~L~~~~~~~~~~~~~~~~d~fD~i~GTS~Gaiia~~la~g~~~~~~~~~~~~~~~ 80 (360)
T d1oxwa_ 1 LGEMVTVLSIDGGGIRGIIPATILEFLEGQLQEMDNNADARLADYFDVIGGTSTGGLLTAMISTPNENNRPFAAAKEIVP 80 (360)
T ss_dssp CCSCEEEEEECCCGGGGHHHHHHHHHHHHHHHHHTTCTTCCHHHHCSEEEECTHHHHHHHHHHSBCTTSSBSSCGGGHHH
T ss_pred CCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCEEEEECHHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf 99700899989878999999999999997497234667997142099999963999999999869970318999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~f~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~ 160 (360)
T d1oxwa_ 81 FYFEHGPQIFNPSGQILGPKYDGKYLMQVLQEKLGETRVHQALTEVVISSFDIKTNKPVIFTKSNLANSPELDAKMYDIS 160 (360)
T ss_dssp HHHHHHHHHTCCCCCSSSCSCCCHHHHHHHHHHHTTCBGGGCSSEEEEEEEETTTTEEEEEESSSTTTCGGGCCBHHHHH
T ss_pred HHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHH
T ss_conf 99861210100123346764546999999999958701332167532673015888748973644356886322698861
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~ASsA~P~~F~p~~~~~~~~~~~~~~~~~~Dgg~~~~nnp~~~a~~e~~~l~~~~~~~~~~~~~~~~~~~~~s~gtg~~~ 240 (360)
T d1oxwa_ 161 YSTAAAPTYFPPHYFVTNTSNGDEYEFNLVDGAVATVADPALLSISVATRLAQKDPAFASIRSLNYKKMLLLSLGTGTTS 240 (360)
T ss_dssp HHHHCCTTTSCCEEEEEECTTSCEEEEEEEEGGGGTCSSCHHHHHHHHHHHTTTCGGGTTSTTCCGGGEEEEEECCCCBC
T ss_pred HHHHCCCCCCCCEEEECCCCCCCCEEEEECCCCHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCC
T ss_conf 15513887778779732247787326774033542256726778999987624675322245677663155314666664
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~R~~~~~~~~~~~~lDd~s~~~l~~l~~ 320 (360)
T d1oxwa_ 241 EFDKTYTAKEAATWTAVHWMLVIQKMTDAASSYMTDYYLSTAFQALDSKNNYLRVQENALTGTTTEMDDASEANMELLVQ 320 (360)
T ss_dssp TTSSCCCHHHHTTCCHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTTCGGGEEEECCCCBCGGGGCTTCCCHHHHHHHHH
T ss_pred CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 33333212442001167689999999876559999999999987447988479974886656541146899999999999
Q ss_pred ---------------------------------------E
Q ss_conf ---------------------------------------8
Q 002647 518 ---------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------a 518 (897)
|
T Consensus 321 ~g~~~~~~~~~~~~~~~~~~~L~~~~~~L~~er~~r~~~~ 360 (360)
T d1oxwa_ 321 VGENLLKKPVSEDNPETYEEALKRFAKLLSDRKKLRANKA 360 (360)
T ss_dssp HHHHHHTSBSSSSCCCBHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999996330343066799999999999999998763059
|
| >d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Phenol hydroxylase species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]
Probab=100.00 E-value=0 Score=27108.30 Aligned_cols=1 Identities=0% Similarity=-0.327 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~yDV~IvGaG~aGl~lA~~La~~~~~~~G~~v~vlEr~~~~~~~~r~~~l~~~~~~~L~~lGl~~~i~~~~~~~ 80 (360)
T d1pn0a1 1 TKYSESYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEANDM 80 (360)
T ss_dssp CCEEEEEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTCBCC
T ss_pred CCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCEEEEECHHHHHHHHHCCCHHHHHHHCCCC
T ss_conf 99888788989989598999999998705332489868998689998868859998989999999869838999626776
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~dg~~s 160 (360)
T d1pn0a1 81 STIALYNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAY 160 (360)
T ss_dssp CEEEEEEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCC
T ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHEEECHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEEEEECCCC
T ss_conf 31599722667741112455543333344320253188999999999986165411356732563688638999605776
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (360)
T d1pn0a1 161 PVTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTLGFEMI 240 (360)
T ss_dssp CEEEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHHTCCCE
T ss_pred CEEEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCC
T ss_conf 35999998404566542331113787058866327765512456865302368888777631754332001011221110
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~grv~LvGDAAH~~~P~~GqG~n~al~Da~~La~~l~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~~~ 320 (360)
T d1pn0a1 241 VTEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLTGRAKRDILKTYEEERQPFAQALIDFDHQFSRL 320 (360)
T ss_dssp ECSCSEETTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHHTTCBCGGGGHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHEEECCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 14444646928983675432050457887520889999999888876589738999999999999999999999999998
Q ss_pred ---------------------------------------E
Q ss_conf ---------------------------------------8
Q 002647 518 ---------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~G~~~~y~~ 360 (360)
T d1pn0a1 321 FSGRPAKDVADEMGVSMDVFKEAFVKGNEFASGTAINYDE 360 (360)
T ss_dssp HHSCBCSSTTCTTSBCHHHHHHHHHHHHHHHTTCCCCCCS
T ss_pred HCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCCCCC
T ss_conf 7799368888860335587899999865554330766688
|
| >d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain species: Fungus (Phanerochaete chrysosporium) [TaxId: 5306]
Probab=100.00 E-value=0 Score=27104.27 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 t~YD~IIVGsG~aG~v~A~rLae~g~~VlvLEaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (360)
T d1kdga1 1 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDIPGLFESLFTDSNPFWWCKDI 80 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCCSGGGTCCCCCGGGGGGTCCTTTCGGGGGGGGTCSCCTTBCTTB
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 95778998968899999999801879699998168987666543454422215764246763212211488755478655
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~G~~lGGsS~in~~~~~r~~~~D~~~~~gwp~~~~~l~py~~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g 160 (360)
T d1kdga1 81 TVFAGCLVGGGTSVNGALYWYPNDGDFSSSVGWPSSWTNHAPYTSKLSSRLPSTDHPSTDGQRYLEQSFNVVSQLLKGQG 160 (360)
T ss_dssp SSCCBCSTTGGGGTSCCBCCCCCGGGGCGGGTCCGGGSCCHHHHHHHHHHSCCBSCCSTTSCCCSCHHHHHHHHHHHTTT
T ss_pred CCCCEEEECCHHCCCCCCCCCCCHHHHEECCCCCCCCCCHHHHHHHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 43101220111011333112244022100246653333013444333202332110037886344422589999999853
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~g~~~~~~~~G~R~s~~~~yl~~a~~r~nl~i~t~~~V~rI~~d~~ra~GV~~~~~~~~~~~~~ 240 (360)
T d1kdga1 161 YNQATINDNPNYKDHVFGYSAFDFLNGKRAGPVATYLQTALARPNFTFKTNVMVSNVVRNGSQILGVQTNDPTLGPNGFI 240 (360)
T ss_dssp CEECCGGGSTTCCTTEEEECCBCEETTEECHHHHTHHHHHHTCTTEEEECSCCEEEEEEETTEEEEEEESCTTSSGGGEE
T ss_pred CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEEECCEEEEEEEEECCCCCCEEE
T ss_conf 16787455788544321000120135322322211356664266300104867999997299899999985236762489
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~v~a~~eVILsAGai~SP~LLl~SGIGp~~~L~~~gi~p~v~~~l~~~~~~~~~p~g~~~~~~~~~~~v~~~~~~~~g~~ 320 (360)
T d1kdga1 241 PVTPKGRVILSAGAFGTSRILFQSGIGPTDMIQTVQSNPTAAAALPPQNQWINLPVGMTTIGSSPQSAVVDSNVKVFGTN 320 (360)
T ss_dssp EEEEEEEEEECSHHHHHHHHHHHTTBSCHHHHHHHHTSHHHHHHSCCGGGCBCCCTTTTCBCSCTTTCSBCTTCBBTTCS
T ss_pred EEEECCEEEEECHHHHCHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCEEEECCCCCCCCEECCCCEEECCC
T ss_conf 99979999993656747299986589955666775328643445546453133663200017897562777531463368
Q ss_pred ---------------------------------------E
Q ss_conf ---------------------------------------8
Q 002647 518 ---------------------------------------G 518 (897)
Q Consensus 518 ---------------------------------------a 518 (897)
-
T Consensus 321 ~l~~~~a~~~p~~~~~~~~~~~~~~ae~aa~~il~~~~~~ 360 (360)
T d1kdga1 321 NLFIVDAGIIPHLPTGNPQGTLMSAAEQAAAKILALAGGP 360 (360)
T ss_dssp SEEECSGGGCSSCCSSCSHHHHHHHHHHHHHHHHHSTTCC
T ss_pred CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 8368854036545789977556588999998875204899
|
| >d4bcla_ b.75.1.1 (A:) Bacteriochlorophyll A protein {Prosthecochloris aestuarii, strain 2k [TaxId: 1102]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Bacteriochlorophyll A protein superfamily: Bacteriochlorophyll A protein family: Bacteriochlorophyll A protein domain: Bacteriochlorophyll A protein species: Prosthecochloris aestuarii, strain 2k [TaxId: 1102]
Probab=100.00 E-value=0 Score=27041.72 Aligned_cols=1 Identities=0% Similarity=-0.394 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 tTtA~~Dyeiileggssswg~vk~rakvNVP~a~pllp~dc~iKi~~Kpl~~~kgvVR~t~~ieSiVDstknkl~vE~DI 80 (359)
T d4bcla_ 1 TTTAHSDYEIILEGGSSSWGQVKGRAKVNVPAAIPLLPTDCNIRIDAKPLDAQKGVVRFTTKIESVVDSVKNTLNVEVDI 80 (359)
T ss_dssp CCEEEEEEEEEECCTTCCCEEEEEEEEECSCCCCSSCCEEEEEEEEEEECC---CCEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEHHHHHHHCCEEEEEEEE
T ss_conf 94212334789707876531023567603898777766666227620205776786999864045776401404899862
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ANEtkdrRiavGEG~vsVGdFSH~FsfEGsVvnl~YyRsdavrrNvpnp~ymqGrqfHDi~mkVPldn~dlIdTWe~~~~ 160 (359)
T d4bcla_ 81 ANETKDRRIAVGEGSLSVGDFSHSFSFEGSVVNMYYYRSDAVRRNIPNPIYMQGRQFHDILMKVPLDNNDLVDTWEGFQQ 160 (359)
T ss_dssp EESSSSEEEEEEEEEEEETTEEEEEEEEEEEEEEESCCCHHHHTTCSSCCCCCEEEEEEEEEEEECCSHHHHHHHHHHHH
T ss_pred CCCCCCCEEEECCCEEEECCCEEEEEEEEEEEEEEEECCHHHHHCCCCCEEECCCCHHHEEEECCCCCHHHHHHHHHHHH
T ss_conf 35787640673243387602224578620488999950146763599865552731100478558995568899999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 a~~~~~~nF~dwIrdfWfIGPa~~al~egGQ~is~I~v~~~~~e~g~k~pvgv~rwrfsh~gsgivdsisrw~elfp~d~ 240 (359)
T d4bcla_ 161 SISGGGANFGDWIREFWFIGPAFAAINEGGQRISPIVVNSSNVEGGEKGPVGVTRWKFSHAGSGVVDSISRWTELFPVEQ 240 (359)
T ss_dssp HC---CCSHHHHHHHHHSTTTHHHHHHHTTEEECCCEEEEEEEECC---CEEEEEEEEEEEESSCCHHHHTTTTTCCGGG
T ss_pred HHHCCCCCHHHHHHHHEEECHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCHHH
T ss_conf 87538974566556514522778888752730330799741025688787553267863787510226777887477634
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 l~~pa~ieg~frsdsqgievkvdg~lpgvsvdaggg~rrilnhpliplvHHGmvgk~n~f~vd~q~kv~lPkGyK~ryaA 320 (359)
T d4bcla_ 241 LNKPASIEGGFRSDSQGIEVKVDGNLPGVSRDAGGGLRRILNHPLIPLVHHGMVGKFNDFTVDTQLKIVLPKGYKIRYAA 320 (359)
T ss_dssp CSSCEEEEEEEEECSSCEEEEEEEEETTSEEEEETTEEEECCCCHHHHHHHTTTTTSSCCEEEEEEEEECCTTCEEEEEE
T ss_pred CCCCCEECCCCCCCCCCEEEEEECCCCCEEECCCCCCHHHHCCCCCCEEECCCEECCCCCCEEEEEEEECCCCCEEEECC
T ss_conf 39850441454456774489982456860442788722441688620031230312577613368999726871676516
Q ss_pred --------------------------------------E
Q ss_conf --------------------------------------8
Q 002647 518 --------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------a 518 (897)
-
T Consensus 321 pqf~sqn~eey~wsGG~Ya~W~EhvCKGg~gqF~ilyaq 359 (359)
T d4bcla_ 321 PQFRSQNLEEYRWSGGAYARWVEHVCKGGTGQFEVLYAQ 359 (359)
T ss_dssp SCCSEEETTEEEEESHHHHHHHHHHHTTCCCCCEEEEEC
T ss_pred CHHHHCCHHHEEECCCHHHHHHHHHHCCCCCCEEEEECC
T ss_conf 301001254368637147888875414887754788429
|
| >d1goxa_ c.1.4.1 (A:) Glycolate oxidase {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: FMN-linked oxidoreductases family: FMN-linked oxidoreductases domain: Glycolate oxidase species: Spinach (Spinacia oleracea) [TaxId: 3562]
Probab=100.00 E-value=0 Score=27037.61 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~i~d~~~~A~~~lp~~~~~y~~gga~~~~t~~~N~~~Fd~i~l~pr~L~d~~~iDlst~~lG~~~~~P~~IspMtg 80 (359)
T d1goxa_ 1 MEITNVNEYEAIAKQKLPKMVYDYYASGAEDQWTLAENRNAFSRILFRPRILIDVTNIDMTTTILGFKISMPIMIAPTAM 80 (359)
T ss_dssp CCCCSTTHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGEEECCCCSCCCSCCBCCEEETTEEESSSEEECCCSC
T ss_pred CCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCEECCCCCCCCCCCCCEEECCCCCCCCEEECCCCC
T ss_conf 95467999999999868888889870567741999999999984626331246887798755678835578615265323
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 g~~~~~~~e~~lA~aA~~~gi~~~~~s~s~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~vd~~~ 160 (359)
T d1goxa_ 81 QKMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPR 160 (359)
T ss_dssp GGGTCTTHHHHHHHHHHHTTCCEEECTTCSSCHHHHHTTCCCCEEEEECCBSSHHHHHHHHHHHHHTTCCEEEEECSCSS
T ss_pred CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
T ss_conf 46677864787656688629722334554565023677469984112222106778999999888754033442224102
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~kg~~~~~da~~ 240 (359)
T d1goxa_ 161 LGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLSWKDVAWLQTITSLPILVKGVITAEDARL 240 (359)
T ss_dssp CCCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHHHHHHTBCTTCCHHHHHHHHHHCCSCEEEECCCSHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHH
T ss_conf 22344412442357853314566553036676556411799998513788999999999861566532200244688899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 a~~~g~~~~~vsnhggr~ld~~~~~~~~l~~i~~~~~~~~~iiadGGIR~G~Di~KALaLGAd~vgigrp~L~~la~~g~ 320 (359)
T d1goxa_ 241 AVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAEGE 320 (359)
T ss_dssp HHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHHHHHHH
T ss_pred HHHCCCCCEECCCCCCCCCCCCCCHHHHCHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHCCH
T ss_conf 98706653220321110000000025445566503478621465057575778999998489989876899999984349
Q ss_pred --------------------------------------E
Q ss_conf --------------------------------------8
Q 002647 518 --------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------a 518 (897)
-
T Consensus 321 ~gv~~~i~~l~~EL~~~M~l~G~~~i~~L~~~~l~~~~~ 359 (359)
T d1goxa_ 321 AGVKKVLQMMRDEFELTMALSGCRSLKEISRSHIAADWD 359 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCSBTTTCCGGGEEETTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHCCCCCC
T ss_conf 999999999999999999985899978959954657899
|
| >d1o2da_ e.22.1.2 (A:) Alcohol dehydrogenase TM0920 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Dehydroquinate synthase-like superfamily: Dehydroquinate synthase-like family: Iron-containing alcohol dehydrogenase domain: Alcohol dehydrogenase TM0920 species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=27031.74 Aligned_cols=1 Identities=0% Similarity=-1.755 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~f~f~~P~~i~fG~g~l~~l~~~~~~~g~k~liV~~~~~~~~~g~~~~v~~~L~~~~i~~~~f~~v~~~p~~~~v~~~~~ 80 (359)
T d1o2da_ 1 VWEFYMPTDVFFGEKILEKRGNIIDLLGKRALVVTGKSSSKKNGSLDDLKKLLDETEISYEIFDEVEENPSFDNVMKAVE 80 (359)
T ss_dssp CCCCCCCCEEEESTTHHHHHGGGGGGTCSEEEEEEESSGGGTSSHHHHHHHHHHHTTCEEEEEEEECSSCBHHHHHHHHH
T ss_pred CEECCCCCEEEEECCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHH
T ss_conf 93737999899948999999999997599589998586888740999999999876984999757468979899987642
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~D~IIavGGGs~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTt~gtgse~t~~avi~~~~~~~k~~ 160 (359)
T d1o2da_ 81 RYRNDSFDFVVGLGGGSPMDFAKAVAVLLKEKDLSVEDLYDREKVKHWLPVVEIPTTAGTGSEVTPYSILTDPEGNKRGC 160 (359)
T ss_dssp HHTTSCCSEEEEEESHHHHHHHHHHHHHTTSTTCCSGGGGCGGGCCCCCCEEEEECSSCCCGGGCCEEEEECTTSCEEEE
T ss_pred HCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCEEEECCCCCCCHHCCCHHHHHHHHHCCCCC
T ss_conf 00135775688516642001899999998489971331167534457787588426455422114214545675500102
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~P~~~i~Dp~l~~~~P~~~~~~~~~Dal~h~~E~~~s~~~~~~~~~~a~~ai~~~~~~l~~~~~~~~~a~~~l~~as 240 (359)
T d1o2da_ 161 TLMFPVYAFLDPRYTYSMSDELTLSTGVDALSHAVEGYLSRKSTPPSDALAIEAMKIIHRNLPKAIEGNREARKKMFVAS 240 (359)
T ss_dssp ECCCCSEEEECGGGGGGCCHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 35778768860754058534445665317999988876400255156688999999999876532104699999877899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~g~a~~~~g~g~~Hai~h~l~~~~~i~HG~~~ai~lp~v~~~~~~~~~ek~~~ia~~lg~~~~~~~~~lglp~~lg~~ 320 (359)
T d1o2da_ 241 CLAGMVIAQTGTTLAHALGYPLTTEKGIKHGKATGMVLPFVMEVMKEEIPEKVDTVNHIFGGSLLKFLKELGLYEKVAVS 320 (359)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHTTTCHHHHHHHTTCCCCCCCC
T ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 99987551678644410245213303877412578879999999998759999999999889999999985991005979
Q ss_pred --------------------------------------E
Q ss_conf --------------------------------------8
Q 002647 518 --------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------a 518 (897)
.
T Consensus 321 ~~~i~~~~~~a~~~~~~~~np~~~t~e~i~~il~~alg~ 359 (359)
T d1o2da_ 321 SEELEKWVEKGSRAKHLKNTPGTFTPEKIRNIYREALGV 359 (359)
T ss_dssp HHHHHHHHHHHTTCGGGGGSSSCCCHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHCCC
T ss_conf 999999999987385021899468999999999987669
|
| >d1x74a1 c.123.1.1 (A:2-360) 2-methylacyl-CoA racemase Mcr {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-transferase family III (CaiB/BaiF) superfamily: CoA-transferase family III (CaiB/BaiF) family: CoA-transferase family III (CaiB/BaiF) domain: 2-methylacyl-CoA racemase Mcr species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=0 Score=27036.10 Aligned_cols=1 Identities=100% Similarity=1.998 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~gPL~girVld~~~~~agp~~~~~lad~GA~VikvE~p~~~~~~~~~~~nr~K~si~lDl~~~~g~~~~~~Lv~~aDv~i 80 (359)
T d1x74a1 1 AGPLSGLRVVELAGIGPGPHAAMILGDLGADVVRIDRPSSVDGISRDAMLRNRRIVTADLKSDQGLELALKLIAKADVLI 80 (359)
T ss_dssp CCTTTTCEEEEECCSTHHHHHHHHHHHTTCEEEEEECC-----CCCCGGGCSCEEEECCTTSHHHHHHHHHHHTTCSEEE
T ss_pred CCCCCCCEEEECCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCEEE
T ss_conf 98999989998278308999999999839979998999999813456651898599972859899999999986689988
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~n~~pg~~~~lgl~~~~l~~~nP~lI~~sisgfG~~Gp~~~~~~~D~~~qA~sG~~~~~g~~~~~P~~~~~~~~d~~~g~ 160 (359)
T d1x74a1 81 EGYRPGVTERLGLGPEECAKVNDRLIYARMTGWGQTGPRSQQAGHDINYISLNGILHAIGRGDERPVPPLNLVGDFGGGS 160 (359)
T ss_dssp ECSCTTHHHHHTCSHHHHHHHCTTCEEEEEESSCSSSTTTTSCCCHHHHHHHTSTGGGSSCTTSCCCCCTTCCCCCCTTH
T ss_pred ECCCCCCHHHCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEHHHHHHHH
T ss_conf 66888736541898788776347816999968988898666565654455556622212789999878732189876799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 l~aa~ailaAL~~R~~tG~Gq~VdvSl~ea~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~y~t~DG~~i~~~~~~ 240 (359)
T d1x74a1 161 MFLLVGILAALWERQSSGKGQVVDAAMVDGSSVLIQMMWAMRATGMWTDTRGANMLDGGAPYYDTYECADGRYVAVGAIE 240 (359)
T ss_dssp HHHHHHHHHHHHHHHHHSCCEEEEEEHHHHHHHHTHHHHHHHHTTSCCSSTTCSTTTTCSTTEEEEECTTSCEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEECC
T ss_conf 99999999999999856997486311167788877799999980798865688867666765476254788368996277
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~l~~d~~~~~~~~~~~~~~el~~~l~~~~~~~t~~e~~~~l~~~gvp~~pV~~~~ev~~dpq~~~r~~~~~ 320 (359)
T d1x74a1 241 PQFYAAMLAGLGLDAAELPPQNDRARWPELRALLTEAFASHDRDHWGAVFANSDACVTPVLAFGEVHNEPHIIERNTFYE 320 (359)
T ss_dssp HHHHHHHHHHHTCCGGGSCCTTCGGGHHHHHHHHHHHHHTSCHHHHHHHTSSSSSCEEECCCHHHHTTCHHHHHTTCEEE
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHCHHHHHHCCEEE
T ss_conf 78777654121201344321101444688899998776666489999999767970895289999874978897199998
Q ss_pred --------------------------------------E
Q ss_conf --------------------------------------8
Q 002647 518 --------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------a 518 (897)
|
T Consensus 321 ~~~~~~~~~~p~~s~tp~~~~~~P~lGeht~eIL~e~lG 359 (359)
T d1x74a1 321 ANGGWQPMPAPRFSRTASSQPRPPAATIDIEAVLTDWDG 359 (359)
T ss_dssp CSSSEEECCSSEESSSCCCCCCCCCCCCCHHHHHHHHTC
T ss_pred ECCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
T ss_conf 689114578878899998899999999789999997279
|
| >d1m6ex_ c.66.1.35 (X:) Salicylic acid carboxyl methyltransferase (SAMT) {Clarkia breweri [TaxId: 36903]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Salicylic acid carboxyl methyltransferase (SAMT) domain: Salicylic acid carboxyl methyltransferase (SAMT) species: Clarkia breweri [TaxId: 36903]
Probab=100.00 E-value=0 Score=27034.68 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 m~~~~~l~M~gG~G~~SYa~NS~~Q~~~i~~~kp~leeai~~~~~~~~~~~~~~IADlGCS~G~Ntl~~v~~iI~~i~~~ 80 (359)
T d1m6ex_ 1 MDVRQVLHMKGGAGENSYAMNSFIQRQVISITKPITEAAITALYSGDTVTTRLAIADLGCSSGPNALFAVTELIKTVEEL 80 (359)
T ss_dssp CCCHHHHCCCCCTTSTTTTSSCHHHHHHHHHTHHHHHHHHHHHHSSSSSSSEECCEEESCCSSTTTTTGGGTTHHHHHHH
T ss_pred CCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH
T ss_conf 98417603379998533999999999999998999999999624677899865999727899965799999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~pe~qvf~nDLP~NDFNtLF~~L~~~~~~~~~~f~~gvpGSFY~rLfP~~Slh~~~Ss~alHWLS~vP~~l~ 160 (359)
T d1m6ex_ 81 RKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIE 160 (359)
T ss_dssp HHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCC
T ss_pred HHHCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHCCCCCCEEEEEEHHHHHHHHCCCCCCC
T ss_conf 98638999972899847888526799998463012678875898657722320178874577642003344303885445
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~n~~~i~~~~~~~~~v~~ay~~Qf~~D~~~FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~~~~~~~~~~l~~al~dmv~eG 240 (359)
T d1m6ex_ 161 SNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDRASTECCLIWQLLAMALNQMVSEG 240 (359)
T ss_dssp CCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEECSSSSSSSTTTSTTTHHHHHHHHHHHHTT
T ss_pred CCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 78886797479998999999999999999999999998357857999985567898888863518999999999999859
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 lI~eek~dsfn~P~Y~ps~eEv~~~ie~~gsF~i~~~e~~~~~~~~~~~~~~~~~d~~~~~~~~a~~~RA~~e~~l~~hf 320 (359)
T d1m6ex_ 241 LIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSSCTKDGDGGGSVEEEGYNVARCMRAVAEPLLLDHF 320 (359)
T ss_dssp CSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEEEEEEETTCCSSCTTCCSSTTTTTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 98899997316842668889999885148975655447654154201223444565889999999999999999999985
Q ss_pred --------------------------------------E
Q ss_conf --------------------------------------8
Q 002647 518 --------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------a 518 (897)
-
T Consensus 321 g~~i~D~lF~r~~~~v~~~~~~~~~~~~~~~~sL~rK~~ 359 (359)
T d1m6ex_ 321 GEAIIEDVFHRYKLLIIERMSKEKTKFINVIVSLIRKSD 359 (359)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSSCCEEEEEEEEEEBCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCC
T ss_conf 828899999999999996076549953999999996689
|
| >d1yvra1 a.118.25.1 (A:5-363) 60-kda SS-aARo ribonucleoprotein {African clawed frog (Xenopus laevis) [TaxId: 8355]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TROVE domain-like family: TROVE domain-like domain: 60-kda SS-aARo ribonucleoprotein species: African clawed frog (Xenopus laevis) [TaxId: 8355]
Probab=100.00 E-value=0 Score=27033.80 Aligned_cols=1 Identities=0% Similarity=-2.021 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~q~~p~~~~qv~N~aGg~a~~~~~~~~L~rfl~~Gt~~~tyY~~~~~l~~e~~~~l~~l~~~~~~~~~v~~l~~~~~~g 80 (359)
T d1yvra1 1 MDQTQPLNEKQVPNSEGCYVWQVSDMNRLRRFLCFGSEGGTYYIEEKKLGQENAEALLRLIEDGKGCEVVQEIKTFSQEG 80 (359)
T ss_dssp CCTTSCSSTTCEECTTSCEEEECCHHHHHHHHHHHCCTTCCSSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
T ss_conf 98777698211556667720369989999999961368986745826526889999999997278278999999998437
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~r~~p~l~aLal~a~~~d~~~r~~a~~~~~~v~r~~~~L~~fv~~~~~~~~~~~~~~~gr~lrkav~~Wy~~~~~~~L 160 (359)
T d1yvra1 81 RAAKQEPTLFALAVCSQCSDIKTKQAAFRAVPEVCRIPTHLFTFIQFKKDLKEGMKCGMWGRALRKAVSDWYNTKDALNL 160 (359)
T ss_dssp CSSCSHHHHHHHHHHHTSSCHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHC--------CCHHHHHHHHHHHHTSCHHHH
T ss_pred CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHH
T ss_conf 88784269999999986898889999999999996682189999999998536768786258999999999864998999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 A~~~~Ky~~r~gwShkDlLrl~Hpkp~~~~~~~l~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 240 (359)
T d1yvra1 161 AMAVTKYKQRNGWSHKDLLRLSHIKPANEGLTMVAKYVSKGWKEVQEAYKEKELSPETEKVLKYLEATERVKRTKDELEI 240 (359)
T ss_dssp HHHHTSCCCSSSCCHHHHHHHTTCCCSSHHHHHHHHHHHTCHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHTCCCHHHH
T ss_pred HHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 99998517778997999999808999847899999999638511111134433660379999999999998715878889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~lI~~~~Lt~E~~p~~~~~~~~vWeaLi~~mp~~ALLRNL~~l~~~gvl~~~~~~~~~V~~rL~D~~~l~~arihP~~~ 320 (359)
T d1yvra1 241 IHLIDEYRLVREHLLTIHLKSKEIWKSLLQDMPLTALLRNLGKMTADSVLAPASSEVSSVCERLTNEKLLKKARIHPFHI 320 (359)
T ss_dssp HHHHHHHCCCGGGSCTTGGGCHHHHHHHHHTCCHHHHHHHHHHHHHTTTTCTTCHHHHHHHHHHTCHHHHHHTTCCHHHH
T ss_pred HHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCHHHH
T ss_conf 99999728989870144316899999998718899999978877452567877278999999847999999725582999
Q ss_pred --------------------------------------E
Q ss_conf --------------------------------------8
Q 002647 518 --------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------a 518 (897)
.
T Consensus 321 L~A~~~Y~~g~~~~~~~~w~p~~~i~~AL~~A~~~sf~~ 359 (359)
T d1yvra1 321 LVALETYKKGHGNRGKLRWIPDTSIVEALDNAFYKSFKL 359 (359)
T ss_dssp HHHHHHHHHCC-----CCCCCCHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 999999984478666677788599999999999987079
|
| >d2hrca1 c.92.1.1 (A:65-423) Ferrochelatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Chelatase-like superfamily: Chelatase family: Ferrochelatase domain: Ferrochelatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27031.22 Aligned_cols=1 Identities=100% Similarity=0.105 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~K~K~aVLl~n~G~P~s~~dv~~yL~~~~~d~~vi~~P~~~~l~~~i~~~r~~~~~~~Y~~igg~SPL~~~t~~q~~~l~ 80 (359)
T d2hrca1 1 RKPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPIQNKLAPFIAKRLTPKIQEQYRRIGGGSPIKIWTSKQGEGMV 80 (359)
T ss_dssp CCCCEEEEEEECCCCSSGGGHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHHHHTTSSCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
T ss_conf 99966999974799999789999999974799721163488888887411008899999863899922999999999988
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~L~~~~~~~~~~~v~~amry~~P~i~~~l~~l~~~G~~~iv~lPLyPqyS~sTtgs~~~~~~k~l~~~~~~~~~~~~~i 160 (359)
T d2hrca1 81 KLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTI 160 (359)
T ss_dssp HHHHHHCGGGCSEEEEEEESSSSSBHHHHHHHHHHTTCSEEEEEESCSSCCTTTHHHHHHHHHHHHHHHTSCCSSEEEEE
T ss_pred HHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCHHCCHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 89876347665437998514355305889999985587440010155423412003226899999998541013566434
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~p~yi~a~a~~i~~~~~~~~~~~~~~~~llfS~HglP~~~~~~gdpY~~q~~~t~~~i~~~l~~~~~~~~~fQSr 240 (359)
T d2hrca1 161 DRWPTHHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYCNPYRLVWQSK 240 (359)
T ss_dssp CCCTTCHHHHHHHHHHHHHHHTTSCGGGTTTCEEEEEEECCBHHHHTTTCSHHHHHHHHHHHHHHHTTTCSCEEEEEECC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHEEEECC
T ss_conf 67788188999999999999972553357772699961123131454189517889999999998734430333244447
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~g~~~Wl~P~~~~~l~~l~~~G~k~v~v~p~gFvsD~lETl~Eidie~~e~~~~~~G~~~~~~vp~lN~~p~fi~~la~l 320 (359)
T d2hrca1 241 VGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAKECGVENIRRAESLNGNPLFSKALADL 320 (359)
T ss_dssp CSSSCBSSSBHHHHHHHHHHTTCCEEEEEECSCSSCCHHHHTTTTTHHHHHSCSSSCCSEEEECCCSTTCHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHH
T ss_conf 79976679858999999997499739998986566534679988899999999975996489827999998999999999
Q ss_pred --------------------------------------E
Q ss_conf --------------------------------------8
Q 002647 518 --------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------a 518 (897)
-
T Consensus 321 v~~~l~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~ 359 (359)
T d2hrca1 321 VHSHIQSNELCSKQLTLSCPLCVNPVCRETKSFFTSQQL 359 (359)
T ss_dssp HHHHHHHTCSSCGGGGSCCTTCCCHHHHHHHHHHHTCCC
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCC
T ss_conf 999864788777556888999887103888850053779
|
| >d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Tandem AAA-ATPase domain domain: Exodeoxyribonuclease V alpha chain (RecD) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27031.19 Aligned_cols=1 Identities=0% Similarity=0.570 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~~~l~~~~~~~~~r~~d~~fa~~~~~~~~~~~~l~~al~s~~~~~Gh~cl~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 80 (359)
T d1w36d1 1 KLQKQLLEAVEHKQLRPLDVQFALTVAGDEHPAVTLAAALLSHDAGEGHVCLPLSRLENNEASHPLLATCVSEIGELQNW 80 (359)
T ss_dssp CTHHHHHHHHHTTSSCHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHTTCSEEETTTTTTGGGGSSSCCCCSSCCTTCSTH
T ss_pred CHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCCHHHCCCCCHHHH
T ss_conf 96899999998183568999999998558985899999999999839997627999751200244430222155558999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~l~~~~~v~~~~~~~p~vl~~~~lyl~~~~~~E~~ia~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~A~~~a 160 (359)
T d1w36d1 81 EECLLASQAVSRGDEPTPMILCGDRLYLNRMWCNERTVARFFNEVNHAIEVDEALLAQTLDKLFPVSDEINWQKVAAAVA 160 (359)
T ss_dssp HHHHHHSTTEESSSSCCSEEECSSEEEEHHHHHHHHHHHHHHTSCCBCCCCCHHHHHHHHHTTCCCTTSCCHHHHHHHHH
T ss_pred HHHHHHCCCCCCCCCCCCEEEECCEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH
T ss_conf 99987276656777888658778884047899999999999998637799983789999997465765663899999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 l~~~~~vI~G~pGTGKTt~i~~~l~~l~~~~~~~~~~I~l~ApTgkAA~~L~e~~~~~~~~~~~~~~~~~~~~~~~~t~~ 240 (359)
T d1w36d1 161 LTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPEDASTLH 240 (359)
T ss_dssp HTBSEEEEECCTTSTHHHHHHHHHHHHHHTCSSCCCCEEEEBSSHHHHHHHHHHHTHHHHHSSCCSCCCCSCSCCCBTTT
T ss_pred HCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 70885999768988752169999999999875269828984375999999998887777645810445542013455789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~ll~~~~~~~~~~~~~~~~l~~d~lIIDEaSmv~~~l~~~ll~~~~~~~~lILvGD~~QLppV~~G~vl~dl~~~~~~~~ 320 (359)
T d1w36d1 241 RLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPDHARVIFLGDRDQLASVEAGAVLGDICAYANAGF 320 (359)
T ss_dssp SCC-----------CTTSCCSCSEEEECSGGGCBHHHHHHHHHTCCTTCEEEEEECTTSGGGTSTTBCHHHHGGGGTTCC
T ss_pred HHHHHHHCCHHHHHHHHCCCCCCEEEEHHHHCCCHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCHHHHHHHHHHCCC
T ss_conf 98763100067777543666541346533214489999999987259998999777221668788818999999773477
Q ss_pred --------------------------------------E
Q ss_conf --------------------------------------8
Q 002647 518 --------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------a 518 (897)
=
T Consensus 321 ~~~~~~~l~r~~~~~~~~~~~~~~~~i~d~l~~L~knyR 359 (359)
T d1w36d1 321 TAERARQLSRLTGTHVPAGTGTEAASLRDSLCLLQKSYR 359 (359)
T ss_dssp CHHHHHHHHHHSSSCCCCCSTTTTHHHHTTEEECCCCCC
T ss_pred CHHHHHHHHHHHCCCCCCCCCCCCCHHCCHHHCCCCCCC
T ss_conf 899999999985410001333334202172112545789
|
| >d1idka_ b.80.1.2 (A:) Pectin lyase {Aspergillus niger, type A [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Single-stranded right-handed beta-helix superfamily: Pectin lyase-like family: Pectin lyase domain: Pectin lyase species: Aspergillus niger, type A [TaxId: 5061]
Probab=100.00 E-value=0 Score=27029.21 Aligned_cols=1 Identities=0% Similarity=-2.121 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~v~~~a~Gfa~~ttGG~~g~~~~Vtt~~eL~~al~~~~PriI~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (359)
T d1idka_ 1 VGVSGSAEGFAKGVTGGGSATPVYPDTIDELVSYLGDDEARVIVLTKTFDFTDSEGTTTGTGCAPWGTASACQVAIDQDD 80 (359)
T ss_dssp CCCCSCCCGGGTTCCTTTTCCCBCCCSHHHHHHHHHSSSCEEEEECSEEECTTTTCEEEEEEECTTCSSTTBCEEECGGG
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 97565574144578788897379938999999986289974999863480356644112333234565431101114443
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~i~v~sn~TI~G~g~~~~i~g~g~~i~~~~~NVIiRNl~i~~~~~~~~~~~DaI~i~~ 160 (359)
T d1idka_ 81 WCENYEPDAPSVSVEYYNAGTLGITVTSNKSLIGEGSSGAIKGKGLRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDD 160 (359)
T ss_dssp HHHHHSCCSCEEEEEEESSTTSCEEECSSEEEEECTTTCEEESCCEEECTTCEEEEEESCEEEEECTTEETSCCSEEECS
T ss_pred CCCCCCCCCCCCEEEEECCCCCCEEECCCCEEEECCCCEEEECCCEEEEECCCEEEEECCEEECCCCCCCCCCCEEEEEC
T ss_conf 22235556763014532167770572799608861588499657468874682199979599568777787887588517
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 s~nVwIDH~s~s~~~d~~~~~~~~~s~~vTis~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~vT~hhN~f~~~~~R~P~~ 240 (359)
T d1idka_ 161 CDLVWIDHVTTARIGRQHYVLGTSADNRVSLTNNYIDGVSDYSATCDGYHYWAIYLDGDADLVTMKGNYIYHTSGRSPKV 240 (359)
T ss_dssp CEEEEEESCEEEEESSCSEEECCCTTCEEEEESCEEECBCSCBTTSSSBBSCCEEECCSSCEEEEESCEEESBCSCTTEE
T ss_pred CCCEEEEEEEECCCCCCCEEEECCCCCCEEEECEEEECCCCCCCCCCCCCCCCCEECCCCCCEEEEEEEECCCCCCCCEE
T ss_conf 86489980060357788635610578726620406523312234566556687332289862899924981577888401
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 r~g~~~hv~NN~~~n~~~~~i~~~~~~~i~~e~N~F~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~ 320 (359)
T d1idka_ 241 QDNTLLHAVNNYWYDISGHAFEIGEGGYVLAEGNVFQNVDTVLETYEGEAFTVPSSTAGEVCSTYLGRDCVINGFGSSGT 320 (359)
T ss_dssp CTTCEEEEESCEEEEEEEEEEEECTTCEEEEESCEEEEEEEEEEEESSEEECCSSTTGGGGGHHHHSSCCCCCEEESSCC
T ss_pred CCCCEEEEECCEEECCCCEEEECCCCEEEEEECEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 34305999876997762557835775158996618867767754467723733567777421244476443113354664
Q ss_pred --------------------------------------E
Q ss_conf --------------------------------------8
Q 002647 518 --------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------a 518 (897)
.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~a~~v~~~V~~nAG~Gkl 359 (359)
T d1idka_ 321 FSEDSTSFLSDFEGKNIASASAYTSVASRVVANAGQGNL 359 (359)
T ss_dssp CCCBCCTTGGGGTTSCCCCCCCGGGHHHHHHHHCSTTCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
T ss_conf 366776521355665545768878977766434898879
|
| >d1qcxa_ b.80.1.2 (A:) Pectin lyase {Aspergillus niger, type B [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Single-stranded right-handed beta-helix superfamily: Pectin lyase-like family: Pectin lyase domain: Pectin lyase species: Aspergillus niger, type B [TaxId: 5061]
Probab=100.00 E-value=0 Score=27028.46 Aligned_cols=1 Identities=0% Similarity=-0.559 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 a~v~g~a~Gfa~~ttGG~~g~v~~Vtt~~eL~~al~~~~PriI~~~gtid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (359)
T d1qcxa_ 1 AGVVGAAEGFAHGVTGGGSASPVYPTTTDELVSYLGDNEPRVIILDQTFDFTGTEGTETTTGCAPWGTASQCQVAINLHS 80 (359)
T ss_dssp CCCCSCCCGGGTTCCTTTTCCCBCCCSHHHHHHHHHSSSCEEEEECSEEECTTTTCEEEEEEECTTCSSTTBCEEECGGG
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCEEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98776676055688788897489938999999986289974999886681344556322334245554322222325332
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~i~v~sn~TI~G~g~~~~i~g~g~~~~~~~~NVIirnl~ir~~~~~~~~~~Dai~i~~ 160 (359)
T d1qcxa_ 81 WCDNYQASAPKVSVTYDKAGILPITVNSNKSIVGQGTKGVIKGKGLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDD 160 (359)
T ss_dssp HHHHHCTTSCEEEEEEEGGGTSCEECCSSEEEEECTTCCEEESCCEEEETTCCCEEEESCEEEEECTTEETSCCSEEEES
T ss_pred CCCCCCCCCCCEEEEEECCCCCEEEECCCCEEEECCCCEEEECCCEEEEECCCCEEEECEEEECCCCCCCCCCCEEEEEC
T ss_conf 22344556762035530267650784798749851588189746568886784489969098558777787897478617
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 s~nvwIDH~s~s~~~d~~~~~~~~~s~~vTvs~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~vT~hhN~~~~~~~R~P~~ 240 (359)
T d1qcxa_ 161 SDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGRSDYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNLSGRMPKV 240 (359)
T ss_dssp CCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEECBCSSBTTSSSBBSCCEEECCSSEEEEEESCEEESBCSCTTEE
T ss_pred CCCEEEEEEECCCCCCCCEEEECCCCCCEEEECCEECCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEECCCCCCCCCCC
T ss_conf 88789982564456887537602677756865307616754101256567787400279861999925615887778606
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 r~g~~~hv~NN~~~n~~~~~~~~~~~~~v~~e~N~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~n~~~~~~ 320 (359)
T d1qcxa_ 241 QGNTLLHAVNNLFHNFDGHAFEIGTGGYVLAEGNVFQDVNVVVETPISGQLFSSPDANTNQQCASVFGRSCQLNAFGNSG 320 (359)
T ss_dssp CSSEEEEEESCEEEEEEEEEEEECTTEEEEEESCEEEEEEEEECSSCSSEEECCCSHHHHGGGHHHHSSCCCCCEEESCC
T ss_pred CCCCEEEEEEEEEECCCCEEEECCCCEEEEEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 07844899941796767778824775189998158889887665564320304687554531245556400011335676
Q ss_pred --------------------------------------E
Q ss_conf --------------------------------------8
Q 002647 518 --------------------------------------G 518 (897)
Q Consensus 518 --------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~~~~~~~~~~~~~t~~~a~~v~~~V~~~AG~GK 359 (359)
T d1qcxa_ 321 SMSGSDTSIISKFAGKTIAAAHPPGAIAQWTMKNAGQGK 359 (359)
T ss_dssp CCCCBCGGGGGGGTTSCCCCCCCGGGHHHHHHHHSSTTC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
T ss_conf 314688530046677663576899999987775289999
|
| >d2hdsa1 e.3.1.1 (A:4-361) AMPC beta-Lactamase, class C {Escherichia coli, cephalosporinase [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: AMPC beta-Lactamase, class C species: Escherichia coli, cephalosporinase [TaxId: 562]
Probab=100.00 E-value=0 Score=26953.34 Aligned_cols=1 Identities=0% Similarity=-0.527 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~p~~~~~~v~~~i~~~~~~~~ipG~~v~v~~~g~~~~~~~G~~~~~~~~~~~~dt~f~iaS~tK~~ta~~i~~lv~~G~l 80 (358)
T d2hdsa1 1 APQQINDIVHRTITPLIEQQKIPGMAVAVIYQGKPYYFTWGYADIAKKQPVTQQTLFELGSVSKTFTGVLGGDAIARGEI 80 (358)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSEEEEEEEETTEEEEEEEEEEETTTTEECCTTCBEECGGGHHHHHHHHHHHHHHTTSC
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEEEEEECCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCC
T ss_conf 96789999999999999838998699999999999999688602566988999997863045999999999999755986
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~ld~~v~~ylp~~~~~~~~~iTir~LLshtsG~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~Ysn~~~~llg~iie 160 (358)
T d2hdsa1 81 KLSDPTTKYWPELTAKQWNGITLLHLATYTAGGLPLQVPDEVKSSSDLLRFYQNWQPAWAPGTQRLYANSSIGLFGALAV 160 (358)
T ss_dssp CTTSBHHHHCTTCCCGGGTTCBHHHHHHTCSSCCCSSCCTTCCSHHHHHHHHHHCCCSSCTTSEECCCHHHHHHHHHHHT
T ss_pred CCCHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHH
T ss_conf 42300010000002321101455665026768980430121222089999876175335898426743541110013231
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~tg~~~~~~~~~~i~~PLgm~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aggl~st~~Dla~f~~~~l~~~~~ 240 (358)
T d2hdsa1 161 KPSGLSFEQAMQTRVFQPLKLNHTWINVPPAEEKNYAWGYREGKAVHVSPGALDAEAYGVKSTIEDMARWVQSNLKPLDI 240 (358)
T ss_dssp GGGTSCHHHHHHHHTTTTTTCTTEESSCCGGGGGGBCCEEETTEEECCCCCTTHHHHTCCEECHHHHHHHHHHHHCGGGC
T ss_pred CCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHCCCCC
T ss_conf 13699821202667775059642527898467315102433686412344545578764623899999999998589987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~G~~~G~~ 320 (358)
T d2hdsa1 241 NEKTLQQGIQLAQSRYWQTGDMYQGLGWEMLDWPVNPDSIINGSDNKIALAARPVKAITPPTPAVRASWVHKTGATGGFG 320 (358)
T ss_dssp SSHHHHHHHHHHTSEEEEETTEEECSSCEEEESSCCTHHHHTSTTSSSSCCCEECEEEEEEECCCSSEEEEEEEEETTEE
T ss_pred CHHHHHHHHHHHHCEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHH
T ss_conf 86888888877632302368766555402035667753234676655211234444556777777850797345267425
Q ss_pred -------------------------------------E
Q ss_conf -------------------------------------8
Q 002647 518 -------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------a 518 (897)
-
T Consensus 321 s~~~~~Pe~~~~ivvltN~~~~~~~~~~~~~~il~al~ 358 (358)
T d2hdsa1 321 SYVAFIPEKELGIVMLANKNYPNPARVDAAWQILNALQ 358 (358)
T ss_dssp EEEEEEGGGTEEEEEEESBCCCHHHHHHHHHHHHHHHC
T ss_pred EEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 89999987997999997799998789999999999759
|
| >d1m7ja3 c.1.9.11 (A:62-419) N-acyl-D-aminoacid amidohydrolase, catalytic domain {Alcaligenes faecalis [TaxId: 511]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: D-aminoacylase, catalytic domain domain: N-acyl-D-aminoacid amidohydrolase, catalytic domain species: Alcaligenes faecalis [TaxId: 511]
Probab=100.00 E-value=0 Score=26956.40 Aligned_cols=1 Identities=100% Similarity=1.866 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 GFID~HtH~D~~~~~~p~~~~~~~~GVTT~v~GncG~s~aP~~~~~~~~~~~~l~~g~~~~w~t~~eyl~~le~~~~~~N 80 (358)
T d1m7ja3 1 GFIDSHTHDDNYLLKHRDMTPKISQGVTTVVTGNCGISLAPLAHANPPAPLDLLDEGGSFRFARFSDYLEALRAAPPAVN 80 (358)
T ss_dssp CEEESSCCCTTHHHHCTTCHHHHTTTEEEEEESCTTCCSCSEECSSCCTTGGGGCSSSCCEESSHHHHHHHHHHSCCSSE
T ss_pred CCEECCCCCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCC
T ss_conf 92522788845532597986414699764888177777145775442005778504777686789999999973587654
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 va~~vgH~~lR~~vmg~~~~~at~~ei~~M~~ll~eal~~GA~G~Stgl~y~P~~~A~~~El~~lak~~~~~g~~~~~h~ 160 (358)
T d1m7ja3 81 AACMVGHSTLRAAVMPDLRREATADEIQAMQALADDALASGAIGISTGAFYPPAAHASTEEIIEVCRPLITHGGVYATHM 160 (358)
T ss_dssp EEEEEEHHHHHHHHCSCCSSCCCHHHHHHHHHHHHHHHHHTCCEEEEETTSGGGTTCCHHHHHHHHTHHHHHTCEEEEEC
T ss_pred EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 03541455554415583023578899999999999999658765235775441035898999999988886098346653
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 r~~~~~~~~~~~e~~~~a~~~g~~~~ish~~~~~~~~~~~~~~~~~~~~~a~~G~~i~~d~yPy~ag~t~l~~~~~~~~~ 240 (358)
T d1m7ja3 161 RDEGEHIVQALEETFRIGRELDVPVVISHHKVMGKLNFGRSKETLALIEAAMASQDVSLDAYPYVAGSTMLKQDRVLLAG 240 (358)
T ss_dssp SCSSTTHHHHHHHHHHHHHHHTSCEEECSCCCCSGGGTTTHHHHHHHHHHHHHHSCEEEEECSCSCEEEECCCCTTTTSS
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHCC
T ss_conf 25663178888999999997298657513345777652568999999999863798641215854134522234444133
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~G~~l~eiA~~~g~~p~d~~~dl~~~~~~~~~~~e~~v~~~l~~p~~~igSDgga~~~~~hpr~~gt 320 (358)
T d1m7ja3 241 RTLITWCKPYPELSGRDLEEIAAERGKSKYDVVPELQPAGAIYFMMDEPDVQRILAFGPTMIGSDGLPHDERPHPRLWGT 320 (358)
T ss_dssp CEEEEEESSCGGGTTCBHHHHHHHTTSCHHHHHHHHCSEEEEECCCCHHHHHHHHHSTTEEECCCCCTTCSSCCTHHHHH
T ss_pred CHHHHCCCCCHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCHHHCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCC
T ss_conf 30110266676542574999998839987887888742210010589999999983999228767665789958888661
Q ss_pred -------------------------------------E
Q ss_conf -------------------------------------8
Q 002647 518 -------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------a 518 (897)
|
T Consensus 321 f~r~L~~~vRe~~~lsLeeAI~k~T~~pA~~~Gl~dRG 358 (358)
T d1m7ja3 321 FPRVLGHYSRDLGLFPLETAVWKMTGLTAAKFGLAERG 358 (358)
T ss_dssp HHHHHCCCCCCTCSSCHHHHHHTTTHHHHHHHTCTTCS
T ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 89999999567881789999999987999983987899
|
| >d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase E1 species: Acidothermus cellulolyticus [TaxId: 28049]
Probab=100.00 E-value=0 Score=26952.81 Aligned_cols=1 Identities=0% Similarity=-1.290 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~g~l~~~G~~~~d~~G~~~~l~GvN~~g~~~~~~~~~~~~~~~~~~~~~~i~~~G~N~VRlpv~~~~~~~~~~~~~~~ 80 (358)
T d1ecea_ 1 AGGGYWHTSGREILDANNVPVRIAGINWFGFETCNYVVHGLWSRDYRSMLDQIKSLGYNTIRLPYSDDILKPGTMPNSIN 80 (358)
T ss_dssp CCCSCCEEETTEEECTTSCEECCEEEECCCBTTTTCSCTTTTTSCHHHHHHHHHHTTCCEEEEEEEGGGGSTTCCCCSCC
T ss_pred CCCCEEEEECCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCHHHCCCCCCCCCCC
T ss_conf 99970996099799999989999987667411345666667724799999999976998899347688746877777755
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~ld~~v~~a~~~Gl~Vildlh~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~v~~~el~ 160 (358)
T d1ecea_ 81 FYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHRPDCSGQSALWYTSSVSEATWISDLQALAQRYKGNPTVVGFDLH 160 (358)
T ss_dssp CSSSCTTTTTCCHHHHHHHHHHHHHHTTCEEEEEEEESBTTBCCSSSCCSSSCHHHHHHHHHHHHHHTTTCTTEEEEECS
T ss_pred CCCCCHHHHCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
T ss_conf 33368111011699999999999997899066401356666888655688277999999999998864476536755320
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 NEP~~~~~~~~~~~~~~~~~~~~~~~~~Ir~~d~~~~v~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~H~Y 240 (358)
T d1ecea_ 161 NEPHDPACWGCGDPSIDWRLAAERAGNAVLSVNPNLLIFVEGVQSYNGDSYWWGGNLQGAGQYPVVLNVPNRLVYSAHDY 240 (358)
T ss_dssp SCCCTTCBSSCCCTTTBHHHHHHHHHHHHHHHCTTSEEEEECBSEETTEECSTTTBCTTTTTSCCCCSSSSCEEEEEECC
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEEEC
T ss_conf 33456776775413455899999999999850899589996546676665322566430432776678667658986414
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pv~igEfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gw~~W~ 320 (358)
T d1ecea_ 241 ATSVYPQTWFSDPTFPNNMPGIWNKNWGYLFNQNIAPVWLGEFGTTLQSTTDQTWLKTLVQYLRPTAQYGADSFQWTFWS 320 (358)
T ss_dssp CTTTCCCGGGSCTTTTTTHHHHHHHHTHHHHHTTSSCEEEEECCCCCCSHHHHHHHHHHHHHTCCHHHHTTSSCEEEESC
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
T ss_conf 78767753456630356677788889999998459709992678888999869999999999999998540181699973
Q ss_pred -------------------------------------E
Q ss_conf -------------------------------------8
Q 002647 518 -------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------a 518 (897)
.
T Consensus 321 ~k~~~~~~~G~~~~dw~~~~~~~~~~i~~~~~~~~~~~ 358 (358)
T d1ecea_ 321 WNPDSGDTGGILKDDWQTVDTVKDGYLAPIKSSIFDPV 358 (358)
T ss_dssp SCSCCTTTCCSBCTTSSSBCHHHHHHHGGGCCCCCCCC
T ss_pred CCCCCCCCCCEECCCCCCCCHHHHHHCCCCCCCCCCCC
T ss_conf 77777887640169888878366532030213568989
|
| >d1dosa_ c.1.10.2 (A:) Fructose-bisphosphate aldolase (FBP aldolase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Aldolase family: Class II FBP aldolase domain: Fructose-bisphosphate aldolase (FBP aldolase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=26952.26 Aligned_cols=1 Identities=0% Similarity=-1.523 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~v~t~~nlk~~L~~A~~~~yAV~AfNv~n~e~~~Aii~AAee~~sPvIlq~s~g~~~y~gg~~~~~~~~~~ 80 (358)
T d1dosa_ 1 SKIFDFVKPGVITGDDVQKVFQVAKENNFALPAVNCVGTDSINAVLETAAKVKAPVIVQFSNGGASFIAGKGVKSDVPQG 80 (358)
T ss_dssp CCGGGTCCSEECCTHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHHHTCCEEEEECHHHHHHHHCTTSCCCSTTH
T ss_pred CCHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCHHHHHHHH
T ss_conf 94663346776757999999999998795699878698999999999999968998999061688770764156668767
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~a~~v~~~a~~~~VPV~lHLDHg~~~~~~~i~~~idag~~~~~~~~~~gfsSVMiDgS~l~~eeNi~~Tk~v 160 (358)
T d1dosa_ 81 AAILGAISGAHHVHQMAEHYGVPVILHTDHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMIDLSEESLQENIEICSKY 160 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGHHHHHHHHHHHHHHHHHHSSCSCSEEEECCTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 88888898999999999837997899657652146778887788899999982777776556778857789999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ve~Ah~~gv~VEaElG~igg~Edg~~~~~~~~~~~~T~peea~~~~~ef~~~tgvD~LAvaiGt~HG~Yk~~~~~l~p~l 240 (358)
T d1dosa_ 161 LERMSKIGMTLEIELGCTGGEEDGVDNSHMDASALYTQPEDVDYAYTELSKISPRFTIAASFGNVHGVYKAGNVVLTPTI 240 (358)
T ss_dssp HHHHHHTTCEEEEECCCCCCCCCCCSCCCCCCCCCSCCHHHHHHHHHHHHTTCSCEEEECCSSCCCSSCCCSCCCCCTHH
T ss_pred HHHHHHHCCEEEEEEEEEECCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHCCCCCCCCCCHH
T ss_conf 99985537768984336404567753210102330599899999999876467651565432614553478876677014
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~i~~~~~vp~~~~~LVlHGgSGip~e~i~~ai~~GV~KiNi~Tdlr~a~~~~ir~~~~~n~~~~~~~~~~~~~~ 320 (358)
T d1dosa_ 241 LRDSQEYVSKKHNLPHNSLNFVFHGGSGSTAQEIKDSVSYGVVKMNIDTDTQWATWEGVLNYYKANEAYLQGQLGNPKGE 320 (358)
T ss_dssp HHHHHHHHHHHHTCCTTCSCEEECSCTTCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHHGGGSSSSEEETTEE
T ss_pred HHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCC
T ss_conf 69999999987289986534120588897688999999819848961719999999999999984846541113675444
Q ss_pred -------------------------------------E
Q ss_conf -------------------------------------8
Q 002647 518 -------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------a 518 (897)
-
T Consensus 321 ~~~~k~~fDPrk~l~~a~~am~~~v~~~~~~fgs~nkl 358 (358)
T d1dosa_ 321 DQPNKKYYDPRVWLRAGQTSMIARLEKAFQELNAIDVL 358 (358)
T ss_dssp EEECHHHHCHHHHHHHHHHHHHHHHHHHHHHTTCSSCC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 57777767908889999999999999999982897779
|
| >d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: (Uracil-5-)-methyltransferase domain: rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=26955.97 Aligned_cols=1 Identities=0% Similarity=-0.958 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 dRv~P~C~~f~~CGGC~~qh~~y~~Ql~~K~~~l~~~~~~~~~~v~~~~p~~YR~r~~~~v~~~~~~~~~~~Gf~~~~s~ 80 (358)
T d1uwva2 1 ERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHDVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSS 80 (358)
T ss_dssp TBCCCSCTTTTTBTTCSCTTBCHHHHHHHHHHHHHHHHTSCCCEEECCCSSSCBSEEEEEEEEETTTTEEEEEEEBTTSS
T ss_pred CCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEECCCC
T ss_conf 98898999999485861008999999999999999862765676657888777415999845765889569989735884
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~iV~i~~C~i~~~~i~~~l~~lr~~l~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 160 (358)
T d1uwva2 81 DIVDVKQCPILAPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAP 160 (358)
T ss_dssp CEEECSCCTTBCHHHHHHHHHHHHHHTTCGGGGGEEEEEEEEETTEEEEEEEESSCCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEE
T ss_conf 06614125145577999999988754033445520399999831880899995266677789999975311363899940
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~g~~~~~~~~g~~~~i~p~sFfQ~N~~~~e~l~~~v~~~~~~~~~~~vlDLycG~G~fsl~La~~~~~V~gv 240 (358)
T d1uwva2 161 DSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGV 240 (358)
T ss_dssp SSSCCEEEECCCCEEEETTEEEECCSSSCCCSBHHHHHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTTSSEEEEE
T ss_pred CCEEEEEECCCCEEEECCCEEEEECCCHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHCCCCCCEEEEC
T ss_conf 43367762487248960888999877133003303446779889875246788449995366665521003565279822
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 E~~~~ai~~A~~na~~n~i~n~~~~~~~~~~~~~~~~~~~~~~d~vilDPPR~G~~~~~~~l~~~~~~~ivYVSCnp~Tl 320 (358)
T d1uwva2 241 EGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATL 320 (358)
T ss_dssp ESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEECCCTTCCHHHHHHHHHHCCSEEEEEESCHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCHHHH
T ss_conf 47499999999848755324621342204543234455404675599679973479999999974999899992898998
Q ss_pred -------------------------------------E
Q ss_conf -------------------------------------8
Q 002647 518 -------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------a 518 (897)
.
T Consensus 321 aRDl~~l~~~gy~l~~i~~~D~FP~T~HvE~v~~l~Rv 358 (358)
T d1uwva2 321 ARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRV 358 (358)
T ss_dssp HHHHHHHHHTTCEEEEEEEECCSTTSSCCEEEEEEEC-
T ss_pred HHHHHHHHHCCCEEEEEEEEECCCCCCCEEEEEEEEEC
T ss_conf 87799998779767599997359998618999999969
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=100.00 E-value=0 Score=26951.12 Aligned_cols=1 Identities=0% Similarity=-0.625 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~~~~~dpr~dP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~ 80 (358)
T d1jkma_ 1 PGRLGDESSGPRTDPRFSPAMVEALATFGLDAVAAAPPVSASDDLPTVLAAVGASHDGFQAVYDSIALDLPTDRDDVETS 80 (358)
T ss_dssp CHHHHCTTCCTTTCTTSCHHHHHHHHTTTTTSCCCCCSSCTTSCHHHHHHHHHHHHHHHHHHHHHSCCCCTTCCCCEEEE
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
T ss_conf 99888987786779998999999997536665677998783315599999987647999988755454269988885079
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~i~~~dg~~i~~~iy~P~~~~~~~Pviv~~HGGG~~~gs~~~~~~~~~~~~la~~g~~VvsvdYRla~~~~pe~~~p~ 160 (358)
T d1jkma_ 81 TETILGVDGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEGHHPFPS 160 (358)
T ss_dssp EEEEECTTSCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTEECCTTH
T ss_pred EEEEECCCCCEEEEEEEECCCCCCCCCEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCH
T ss_conf 99996789988899999417888898749996387104066542221067888875100133000001246565677733
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~l~D~~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 240 (358)
T d1jkma_ 161 GVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYAWDHERRLTELPSL 240 (358)
T ss_dssp HHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTTSCHHHHHHHCTHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCHHHCCCCCCH
T ss_conf 56777888889987232468754034444672679999999976527876542223455211366576411110234210
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~a~~~~~~~lPp~li~~g~~D~l~~e~~~~~~~L~~aGv~v~~~~ 320 (358)
T d1jkma_ 241 VENDGYFIENGGMALLVRAYDPTGEHAEDPIAWPYFASEDELRGLPPFVVAVNELDPLRDEGIAFARRLARAGVDVAARV 320 (358)
T ss_dssp HHTTTSSSCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHHHTTCCCEEEEEETTCTTHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 00234445516666677642775577457300234530110258999899987887787999999999998799589999
Q ss_pred -------------------------------------E
Q ss_conf -------------------------------------8
Q 002647 518 -------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------a 518 (897)
-
T Consensus 321 ~~g~~Hgf~~~~~~~~~~~~~~~~~~i~~Fl~~~~~~~ 358 (358)
T d1jkma_ 321 NIGLVHGADVIFRHWLPAALESTVRDVAGFAADRARLR 358 (358)
T ss_dssp ETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ECCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 79896463542466697899999999999999897569
|
| >d1edqa2 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalytic domain {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Type II chitinase domain: Chitinase A, catalytic domain species: Serratia marcescens [TaxId: 615]
Probab=100.00 E-value=0 Score=26949.54 Aligned_cols=1 Identities=0% Similarity=-0.394 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~p~~~~~~~~~~~~~~~~~~~v~~Yy~~W~~y~~~~~~~~I~~~~~THi~YAFa~v~~~~~~~~~~~~~~~~~~ 80 (358)
T d1edqa2 1 TDGSHLAPLKEPLLEKNKPYKQNSGKVVGSYFVEWGVYGRNFTVDKIPAQNLTHLLYGFIPICGGNGINDSLKEIEGSFQ 80 (358)
T ss_dssp TTCTTSCCCCCCCCTTCCCBCCCSSCEEEEEEEGGGGSTTCCCGGGSCGGGCSEEEEEEECBCCCTTTSGGGGGSTTHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHCCHHHCCEEEEEEEEECCCCCCCCCCCCCCCCCC
T ss_conf 99754688779778889888789998999995952023899992469986797699950772698874654222333222
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~LK~~~p~lKvllSiGGw~~s~~~~~~a~~~~R~~ 160 (358)
T d1edqa2 81 ALQRSCQGREDFKVSIHDPFAALQKAQKGVTAWDDPYKGNFGQLMALKQAHPDLKILPSIGGWTLSDPFFFMGDKVKRDR 160 (358)
T ss_dssp HHHHHTTTCCTTSBCCSCHHHHHTSCBTTBCSTTCSSCHHHHHHHHHHHHCTTCEEEEEEECSSSCGGGGGTTSHHHHHH
T ss_pred CCCCCCCCCCCCCEEECCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHH
T ss_conf 22224466777615612714432033467664344344289999999974899769999989987888602358789999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 Fi~svv~~l~~y~~fDGIDIDWEyP~~~g~~~~~~~~~D~~nf~~Ll~eLR~~l~~~~~~~~~~~~ls~a~~~~~~~~~~ 240 (358)
T d1edqa2 161 FVGSVKEFLQTWKFFDGVDIDWEFPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSVETGRKYELTSAISAGKDKIDK 240 (358)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECSCTTSCSSCTTCCCTTHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECSHHHHTT
T ss_pred HHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHH
T ss_conf 99999999998353786131124323345778778978998999999999999887643317742025650476445413
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~l~~~vD~inlMtYD~~G~w~~~~~g~~t~l~~~~~~~~~~~~v~~~v~~~~~~Gvp~~KlvlGip~YGRs~~~K~ 320 (358)
T d1edqa2 241 VAYNVAQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNGVNALLAQGVKPGKIVVGTAMDARSVQAKG 320 (358)
T ss_dssp SCHHHHGGGCSEEEEECCCSSCTTCSSSCCCSSCSSCCTTCTTCSCCHHHHHHHHHHHTCCGGGEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHEEEEECCCHHHHHHHH
T ss_conf 21777863378898860245577787887877888887667877652999999999878998896999685479999887
Q ss_pred -------------------------------------E
Q ss_conf -------------------------------------8
Q 002647 518 -------------------------------------G 518 (897)
Q Consensus 518 -------------------------------------a 518 (897)
-
T Consensus 321 ~y~~~~~lgG~~~W~~~~D~g~ll~a~~~~l~~~~~~~ 358 (358)
T d1edqa2 321 KYVLDKQLGGLFSWEIDADNGDILNSMNASLGNSAGVQ 358 (358)
T ss_dssp HHHHHHTCCEEEEECGGGCCSHHHHHHHHHTTCCBSCC
T ss_pred HHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCC
T ss_conf 78862897439887156786289999998647854679
|
| >d2qapa1 c.1.10.1 (A:1-357) Fructose-1,6-bisphosphate aldolase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Aldolase family: Class I aldolase domain: Fructose-1,6-bisphosphate aldolase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=100.00 E-value=0 Score=26881.81 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~el~~~a~~~~~~GKGilAADeS~gT~~Krl~~iGventEenr~~~R~~l~tsp~~~~ 80 (357)
T d2qapa1 1 MSRVTVLQSQLPAYNRLKTPYESELIATVKKLTTPGKGLLAADESIGSCTKRFQPIGLSNTEEHRRQYRALMLEAEGFEQ 80 (357)
T ss_dssp CCEEEEEGGGSGGGCSCCCTTHHHHHHHHHHHTCTTCEEEEECCCTTTHHHHHGGGTCCCCHHHHHHHHHHHHTCTTGGG
T ss_pred CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHH
T ss_conf 96121111037775445847899999999998079986998358998277789876999978999999998847987555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~IsGvILfeeTm~q~~~~g~~~~~ll~~kGIVPgIKVDkGl~~~~~G~~~ek~t~gLD~L~~R~~ey~~~Ga~faKwRsV 160 (357)
T d2qapa1 81 YISGVILHDETVGQKASNGQTFPEYLTARGVVPGIKTDMGLCPLLEGAEGEQMTEGLDGYVKRASAYYKKGCRFCKWRNV 160 (357)
T ss_dssp TEEEEEECHHHHTCBCTTSSBHHHHHHHTTCEEEEECCCCEEECSSSSTTCEEECCCTTHHHHHHHHHHTTCCEEEEEEE
T ss_pred CEEEEEECHHHHHHHCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEECCCCHHC
T ss_conf 44689812898732302799779999847981544247751478789974642625677999877754233300310100
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 i~i~~~~ps~~~I~~na~~laryA~i~q~~GLVPIVEPEVlidg~h~~e~~~~vte~vl~~~~~~l~~~~V~Leg~lLKp 240 (357)
T d2qapa1 161 YKIQNGTVSESAVRFNAETLARYAILSQMSGLVPIVEPEVMIDGKHDIDTCQRVSEHVWREVVAALQRHGVIWEGCLLKP 240 (357)
T ss_dssp ECCBTTBCCHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCGGGCEECC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 43666775044466568999999999997497631051233224564688899999999999998875314445776543
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 nMv~~G~~~~~~~~~e~va~~tv~~l~~tvP~~VpgIvfLSGGqS~eeAt~~LnaiN~~~~~~pw~lsfSfsRALQ~s~L 320 (357)
T d2qapa1 241 NMVVPGAESGKTAAPEQVAHYTVMTLARTMPAMLPGVMFLSGGLSEVQASEYLNAINNSPLPRPYFLSFSYARALQSSAL 320 (357)
T ss_dssp CCCCCCTTSSCCCCHHHHHHHHHHHHHHHSBTTCCEEEECCTTCCHHHHHHHHHHHTTCCSCCCSEEEEEESHHHHHHHH
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHH
T ss_conf 42224543345688556302356665214797787113147886789999999997424578998589863397608999
Q ss_pred ------------------------------------E
Q ss_conf ------------------------------------8
Q 002647 518 ------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------a 518 (897)
-
T Consensus 321 k~W~g~~env~~aQ~~~~~Ra~~ns~A~~G~y~~~~e 357 (357)
T d2qapa1 321 KAWGGKESGLAAGRRAFLHRARMNSMAQLGKYKRSDD 357 (357)
T ss_dssp HHHTTSGGGHHHHHHHHHHHHHHHHHHHTTCCCGGGC
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 9857974639999999999999868986688687789
|
| >d1taza_ a.211.1.2 (A:) Catalytic domain of cyclic nucleotide phosphodiesterase 1b, PDE1B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: HD-domain/PDEase-like superfamily: HD-domain/PDEase-like family: PDEase domain: Catalytic domain of cyclic nucleotide phosphodiesterase 1b, PDE1B species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=26881.58 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~w~Fd~f~l~~~~~~~~L~~~~~~if~~~~l~~~f~i~~~~l~~Fl~~v~~~Y~~~~nPYHN~ 80 (357)
T d1taza_ 1 VGPTYSTAVLNCLKNLDLWCFDVFSLNQAADDHALRTIVFELLTRHNLISRFKIPTVFLMSFLDALETGYGKYKNPYHNQ 80 (357)
T ss_dssp CCCCCCHHHHHHHTTTTSTTCCHHHHHHHTTSCHHHHHHHHHHHHTTHHHHTTCCHHHHHHHHHHHHHHHTTTCCSSSSH
T ss_pred CCCCCCHHHHHHHHCCCCCCCCCHHCCHHCCCCHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCH
T ss_conf 99889899999986455699980130101389829999999999878376439899999999999998457789875359
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~HA~dV~q~~~~lL~~~~~~~~l~~~E~~alliAal~HD~~HpG~~N~flv~s~~~LA~lYnd~SvLEnhH~~~~~~lL~ 160 (357)
T d1taza_ 81 IHAADVTQTVHCFLLRTGMVHCLSEIELLAIIFAAAIHDYEHTGTTNSFHIQTKSECAIVYNDRSVLENHHISSVFRLMQ 160 (357)
T ss_dssp HHHHHHHHHHHHHHHHHSGGGGSCHHHHHHHHHHHHHTTTTCCSSCHHHHHHHTCHHHHHHTTSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHC
T ss_conf 99999999999999635632338999999999999988248899635799863887888639987789999999999980
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~i~~~l~~~~~~~~r~~ii~~ILaTDm~~H~~~l~~~~~~~~~~~~~~r~~~~~~lik~ADis~~~rp~~~~~~W~ 240 (357)
T d1taza_ 161 DDEMNIFINLTKDEFVELRALVIEMVLATDMSCHFQQVKTMKTALQQLERIDKPKALSLLLHAADISHPTKQWLVHSRWT 240 (357)
T ss_dssp SGGGCTTTTSCHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHTCGGGSCHHHHHHHH
T ss_pred CCCHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
T ss_conf 61000103899899999999999998222267689999999999974114109999999998623554236779999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~l~~Ef~~Qgd~E~~~gl~~sp~~dr~~~~~~~~QigFi~~iv~Plf~~l~~~~p~~~~p~~~~~~~n~~~~~~~~~~~ 320 (357)
T d1taza_ 241 KALMEEFFRQGDKEAELGLPFSPLCDRTSTLVAQSQIGFIDFIVEPTFSVLTDVAEKSVQPLADEDSKSKNQPSFQWRQP 320 (357)
T ss_dssp HHHHHHHHHHHHHHHHHTCC------CCHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHC--------------------
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999998899845999987668754320788999999999999999998770653688899999999899987641
Q ss_pred ------------------------------------E
Q ss_conf ------------------------------------8
Q 002647 518 ------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------a 518 (897)
.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~en~~~~~~~~a~ 357 (357)
T d1taza_ 321 SLDVEVGDPNPDVVSFRSTWVKRIQENKQKWKERAAS 357 (357)
T ss_dssp -------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 2234557876234321314556545438999987439
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=100.00 E-value=0 Score=26879.03 Aligned_cols=1 Identities=0% Similarity=0.072 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~f~~~~f~l~~G~~l~~~~laY~t~G~ln~~~~NaVlv~h~~tg~~~~~~~~~~~gWW~~liG~g~alDt~kyf 80 (357)
T d2b61a1 1 SVQNVVLFDTQPLTLMLGGKLSYINVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYF 80 (357)
T ss_dssp CCEEEEESSSSCEECTTSCEECSEEEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCE
T ss_pred CCCEEEEEECCCEECCCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEE
T ss_conf 97428998479825689986589569999623337889988998488776653335678887588712799766777518
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 VI~~n~lG~~~gSs~p~s~~p~tg~~~g~~FP~iti~D~v~aq~~Ll~~LGI~~l~~viG~SmGGmqAl~wa~~~Pd~v~ 160 (357)
T d2b61a1 81 FISSNVLGGCKGTTGPSSINPQTGKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMD 160 (357)
T ss_dssp EEEECCTTCSSSSSCTTSBCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTTSEE
T ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
T ss_conf 99855667766667767889888997776422110689999999999871866488884040788899999874267774
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~i~i~~~a~~s~~~~~~~~~~~~aI~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r~~~~~~~~~~ 240 (357)
T d2b61a1 161 NIVNLCSSIYFSAEAIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWG 240 (357)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTS
T ss_pred HHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCC
T ss_conf 33244456433235788878899999828777788755688830689999999886404789999874522234433236
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~vesyL~~~g~kf~~rfDan~yl~l~~a~~~~D~~~~~~~l~~aL~~I~a~vLvi~~~sD~lFpp~~~~~~a~~l~~ 320 (357)
T d2b61a1 241 DYFQVESYLSYQGKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQ 320 (357)
T ss_dssp CCBHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHH
T ss_conf 53569999999889887607999999999986632654333338999862699889998477506598999999999986
Q ss_pred ------------------------------------E
Q ss_conf ------------------------------------8
Q 002647 518 ------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------a 518 (897)
-
T Consensus 321 ~~~~v~~~~I~S~~GHdafL~e~~~~~~~I~~fL~~~ 357 (357)
T d2b61a1 321 SGVDLHFYEFPSDYGHDAFLVDYDQFEKRIRDGLAGN 357 (357)
T ss_dssp TTCEEEEEEECCTTGGGHHHHCHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 6998699997999875554769899999999997359
|
| >d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme-dependent peroxidases superfamily: Heme-dependent peroxidases family: CCP-like domain: Fungal peroxidase (ligninase) species: Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]
Probab=100.00 E-value=0 Score=26876.90 Aligned_cols=1 Identities=0% Similarity=-0.028 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 a~c~~g~~~~na~cc~~~~v~~dlq~~~~~~~c~~~A~~~lRL~FHDcfv~~~~~g~~~~gGcDgSill~~~~E~~~~~N 80 (357)
T d1yyda1 1 AVCPDGTRVSHAACCAFIPLAQDLQETIFQNECGEDAHEVIRLTFHDAIAISRSQGPKAGGGADGSMLLFPTVEPNFSAN 80 (357)
T ss_dssp CBCTTSCBCSCGGGTTHHHHHHHHHHHTTTTSSSHHHHHHHHHHHHHHHCCCTTTCGGGCCSSSCHHHHSTTTGGGSGGG
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC
T ss_conf 92899753677435467999999999985587507899999999824105103567678999781302178644678665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~Gld~i~~~~~~~~~~~~~VScADiialAardAV~~~~GGP~~~v~~GR~Da~~a~~~~~LP~p~~~~~~l~~~Fa~~~G 160 (357)
T d1yyda1 81 NGIDDSVNNLIPFMQKHNTISAADLVQFAGAVALSNCPGAPRLEFLAGRPNKTIAAVDGLIPEPQDSVTKILQRFEDAGG 160 (357)
T ss_dssp TTTHHHHHHHHHHHHHSTTSCHHHHHHHHHHHHHHTSTTCCCCCCEECCCSCCCCCCTTCSCCTTCCHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 88799999999999637998999999999999997306897204248888642234446789864569999999766512
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 lt~~dmVaLsGAHTIG~ah~~~~~~~~~~~~~tp~~fDn~~f~~ll~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~L~ 240 (357)
T d1yyda1 161 FTPFEVVSLLASHSVARADKVDQTIDAAPFDSTPFTFDTQVFLEVLLKGVGFPGSANNTGEVASPLPLGSGSDTGEMRLQ 240 (357)
T ss_dssp CCHHHHHHHGGGGGGCEESSSSTTCSCEESSSCTTSCSSHHHHHHTBCCCBCSSCSCCTTEECBSCCCCBTTBCCCCEEH
T ss_pred CCHHHHHEEECCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 88377611323331000245677754333466656301799999986368988888887601377744440102466248
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 SD~~L~~D~~T~~~V~~yA~n~~~F~~~Fa~AmvKms~lG~~~~~l~dcs~v~p~~~~~~~~~~~~p~~~~~~d~~~~~~ 320 (357)
T d1yyda1 241 SDFALAHDPRTACIWQGFVNEQAFMAASFRAAMSKLAVLGHNRNSLIDCSDVVPVPKPATGQPAMFPASTGPQDLELSCP 320 (357)
T ss_dssp HHHHHHHSTTTHHHHHHTTTCHHHHHHHHHHHHHHHTTTTSCGGGSEECGGGSCCCCCCCCCCCCBCTTCCGGGBCCCCT
T ss_pred HHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC
T ss_conf 99988419889999999965999999999999999997699953144577657899887788876789998676553055
Q ss_pred ------------------------------------E
Q ss_conf ------------------------------------8
Q 002647 518 ------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------a 518 (897)
+
T Consensus 321 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (357)
T d1yyda1 321 SERFPTLTTQPGASQSLIAHCPDGSMSCPGVQFNGPA 357 (357)
T ss_dssp TSCCCCCCBCSCSSCCCCCSSTTSCSCCCCCCCCCCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 8999887789985334457899877689756678999
|
| >d1a05a_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH {Thiobacillus ferrooxidans [TaxId: 920]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Isocitrate/Isopropylmalate dehydrogenase-like superfamily: Isocitrate/Isopropylmalate dehydrogenase-like family: Dimeric isocitrate & isopropylmalate dehydrogenases domain: 3-isopropylmalate dehydrogenase, IPMDH species: Thiobacillus ferrooxidans [TaxId: 920]
Probab=100.00 E-value=0 Score=26876.85 Aligned_cols=1 Identities=0% Similarity=-0.924 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 M~kI~vipGDGIGpEV~~~~~~Vl~a~~~~~~~~i~~~~~~~G~~~~~~~g~~lp~~t~~~~~~~dail~Gai~~p~~~~ 80 (357)
T d1a05a_ 1 MKKIAIFAGDGIGPEIVAAARQVLDAVDQAAHLGLRCTEGLVGGAALDASDDPLPAASLQLAMAADAVILGAVGGPRWDA 80 (357)
T ss_dssp CCEEEEEEESTTHHHHHHHHHHHHHHHHHHHTCCCEEEECCCHHHHHHHHSSSSCHHHHHHHHHCSEEEEEECCCGGGTT
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCEEHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 97899977678669999999999999987708985999997552425441994899999999973065406656887567
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~lR~~ldlyanvRP~k~~pg~~~~~pl~~~~~~~vD~vivREnteg~Y~g~~~~~~~~~~~~~a~~~~ 160 (357)
T d1a05a_ 81 YPPAKRPEQGLLRLRKGLDLYANLRPAQIFPQLLDASPLRPELVRDVDILVVRELTGDIYFGQPRGLEVIDGKRRGFNTM 160 (357)
T ss_dssp SCGGGSHHHHHHHHHHHHTCCEEEEEEECCTTSGGGCSBCHHHHTTCEEEEEEECSSSTTTCSSCEEEEETTEEEEEEEE
T ss_pred CCCCCCCCCHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEECCCCCEEEEEEE
T ss_conf 78555666477889975695588777640367666789886667761399987455643357753221267764899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~t~~~~~ri~~~Af~~a~~r~k~vt~v~K~ni~~~~~lf~~~~~eva~~yp~i~~~~~~vD~~~~~lv~~P~~fdViv~ 240 (357)
T d1a05a_ 161 VYDEDEIRRIAHVAFRAAQGRRKQLCSVDKANVLETTRLWREVVTEVARDYPDVRLSHMYVDNAAMQLIRAPAQFDVLLT 240 (357)
T ss_dssp EEEHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCHHHHHHHHHHHHHGGGCTTSEEEEEEHHHHHHHHHHCGGGCSEEEE
T ss_pred EEEHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCCCCEEEC
T ss_conf 96289999999999988645786488885366411368999999999865898278751799999998745456567851
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~Nl~GDIlSDl~a~l~GglGl~ps~nig~~~a~fE~~HGsapdiaGk~~aNP~a~ils~ammL~~~lg~~~~A~~i~~Av 320 (357)
T d1a05a_ 241 GNMFGDILSDEASQLTGSIGMLPSASLGEGRAMYEPIHGSAPDIAGQDKANPLATILSVAMMLRHSLNAEPWAQRVEAAV 320 (357)
T ss_dssp CHHHHHHHHHHHHHTTSCGGGCEEEEECSSCEEEEESSCCCGGGTTTTCSCCHHHHHHHHHHHHHTSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 17888878899988735765410300068730102456878000589865949999999999972089879999999999
Q ss_pred ------------------------------------E
Q ss_conf ------------------------------------8
Q 002647 518 ------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------a 518 (897)
-
T Consensus 321 ~~~i~~g~~T~Dlgg~~t~~~~T~e~~daV~~~l~~~ 357 (357)
T d1a05a_ 321 QRVLDQGLRTADIAAPGTPVIGTKAMGAAVVNALNLK 357 (357)
T ss_dssp HHHHHTTCCCGGGCCTTSCCCCHHHHHHHHHHTTTCC
T ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 9999769967566999998768999999999987469
|
| >d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) species: Pseudomonas stutzeri [TaxId: 316]
Probab=100.00 E-value=0 Score=26875.74 Aligned_cols=1 Identities=0% Similarity=-1.190 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~g~~~~~~~f~w~~~~~~~~~~~~~i~~kl~yl~~lGv~aIwl~P~~~~~~~~~~~~~~~~~hgY~~ 80 (357)
T d1gcya2 1 DQAGKSPNAVRYHGGDEIILQGFHWNVVREAPNDWYNILRQQAATIAADGFSAIWMPVPWRDFSSWSDGSKSGGGEGYFW 80 (357)
T ss_dssp CCCCCCTTCCCCGGGCCCEEECCCTTHHHHSTTTHHHHHHHHHHHHHHTTCSEEEECCCSCCCCCBC---CCBCCSSTTC
T ss_pred CCCCCCCCCEEECCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCEECCCCCCCCCCCCCCCCCCH
T ss_conf 95556898605358987788624468788777747999999789999739999996947547866777777888788470
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~dy~vd~~~Gt~~df~~LV~~aH~~GI~VIlD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (357)
T d1gcya2 81 HDFNKNGRYGSDAQLRQAASALGGAGVKVLYDVVPNHMNRGYPDKEINLPAGQGFWRNDCADPGNYPNDCDDGDRFIGGD 160 (357)
T ss_dssp SSSCSCSSSCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTCSSCSCCCCSSSSCBGGGSCCCSSSCBTTBSSCCSTTST
T ss_pred HHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 30656866799999999999999638737898700354788875100465688765456677778888878555445665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~dln~~np~v~~~~~~~~~~~~~~~giDGfR~Daa~~i~~~~~~~~~~~~~~~~~~~gE~~~~~~~~~~~~~~~~~~~~~ 240 (357)
T d1gcya2 161 ADLNTGHPQVYGMFRDEFTNLRSQYGAGGFRFDFVRGYAPERVNSWMTDSADNSFCVGELWKGPSEYPNWDWRNTASWQQ 240 (357)
T ss_dssp TBBCTTSHHHHHHHHHHHHHHHHHSCEEEEEESCGGGSCHHHHHHHHHHHCTTSEEEECCCCCGGGSCTTSGGGGSCHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCCCHHHH
T ss_conf 54477987999999999998777528987999515308999999998501788234543225763011011210110456
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fl~NHD~~r~~~~~~~~~~~~~~~~~~~la~a 320 (357)
T d1gcya2 241 IIKDWSDRAKCPVFDFALKERMQNGSIADWKHGLNGNPDPRWREVAVTFVDNHDTGYSPGQNGGQHHWALQDGLIRQAYA 320 (357)
T ss_dssp HHHHHHHHHTSCEECHHHHHHHHHSCGGGGGGSGGGCSSHHHHTTEEECSCCTTTSBCSSGGGBCCSSCCCGGGHHHHHH
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 66767640344310035554300456999999985076656645257740477755424457864334287999999999
Q ss_pred ------------------------------------E
Q ss_conf ------------------------------------8
Q 002647 518 ------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------a 518 (897)
.
T Consensus 321 lllt~pGiP~IyyGde~d~g~~d~i~~li~iRk~~~i 357 (357)
T d1gcya2 321 YILTSPGTPVVYWDHMYDWGYGDFIRQLIQVRRAAGV 357 (357)
T ss_dssp HHHHSSSEEEEEHHHHHTSSCHHHHHHHHHHHHHHTC
T ss_pred HHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 9995799127970785467886999999999976879
|
| >d1t1ga_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Bacillus novosp. MN-32, kumamolisin [TaxId: 198803]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Serine-carboxyl proteinase, SCP domain: Serine-carboxyl proteinase, SCP species: Bacillus novosp. MN-32, kumamolisin [TaxId: 198803]
Probab=100.00 E-value=0 Score=26875.65 Aligned_cols=1 Identities=0% Similarity=-0.726 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~p~~~~~~y~~~~G~tG~Gv~VaViDtGvd~~H~dl~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~ 80 (357)
T d1t1ga_ 1 AAPTAYTPLDVAQAYQFPEGLDGQGQCIAIIALGGGYDETSLAQYFASLGVSAPQVVSVSVDGATNQPTGDPNGPDGEVE 80 (357)
T ss_dssp CCCEEECHHHHHHHTTCCTTCCCTTCEEEEEESSCCCCHHHHHHHHHHTTCCCCCEEEEESTTCCCCCCSCTTSTHHHHH
T ss_pred CCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 99874789999998787889898897899997688778688987775058878998633799999887876556443005
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~d~~~~~GvAp~A~i~~~~~~~~~~~~~~~i~~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~g~~vv~ 160 (357)
T d1t1ga_ 81 LDIEVAGALAPGAKIAVYFAPNTDAGFLNAITTAVHDPTHKPSIVSISWGGPEDSWAPASIAAMNRAFLDAAALGVTVLA 160 (357)
T ss_dssp HHHHHHHHHSTTSEEEEEECCSSHHHHHHHHHHHHHCTTTCCSEEEECCCEEGGGSCHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCCCEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEE
T ss_conf 77643125414676998741247884589999998741149808965666576766543489998766532157867999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 aagn~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~p~~~~~~~~~~~~ 240 (357)
T d1t1ga_ 161 AAGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRLVASAGRIERETVWNDGPDGGSTGGGVSRIFPLPSWQERANVPPSA 240 (357)
T ss_dssp ECCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEEEECSSCEEEEEECBCHHHHCBCCCEECSSSCCCGGGTTSCCCCCS
T ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 84168743211344544201135776236654023678775445201266666433447744121367523354234556
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~pd~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VaG~~ALl~q~~~~~~g~~np~l~~~~~~~~~dit~g 320 (357)
T d1t1ga_ 241 NPGAGSGRGVPDVAGNADPATGYEVVIDGETTVIGGTSAVAPLFAALVARINQKLGKPVGYLNPTLYQLPPEVFHDITEG 320 (357)
T ss_dssp STTCCCCCEECSEEEECCTTEEEEEEETTEEEEECSGGGHHHHHHHHHHHHHHHHSSCCCCCHHHHTTSCGGGEECCCSC
T ss_pred CCCCCCCCEECCEECCCCCCCCEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEECCCCC
T ss_conf 67777773313321135787742774699666168831687999999999976405886765999986260133124326
Q ss_pred ------------------------------------E
Q ss_conf ------------------------------------8
Q 002647 518 ------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------a 518 (897)
=
T Consensus 321 ~~~~~~~~~~~~a~~G~d~~tG~G~~n~~~~~~~l~p 357 (357)
T d1t1ga_ 321 NNDIANRARIYQAGPGWDPCTGLGSPIGIRLLQALLP 357 (357)
T ss_dssp BCCCSSSSCCSBCCSSSBTTTBTCEECHHHHHHHHCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
T ss_conf 7788888776567668988846741549999874088
|
| >d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Pepsin species: Mucor pusillus [TaxId: 4840]
Probab=100.00 E-value=0 Score=26873.12 Aligned_cols=1 Identities=0% Similarity=-0.293 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~~~~~~~Y~~~i~iGtP~Q~~~~ivDTGSs~~wv~~~~C~~~~~c~~~~~f~~~~SsT~~~~~~~~~~~y~~ 80 (357)
T d1mppa_ 1 GSVDTPGLYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGKRFFDPSSSSTFKETDYNLNITYGT 80 (357)
T ss_dssp CCEEEEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSSCCBCGGGCTTCEEEEEEEEEECSS
T ss_pred CCCCCCCEECCCCCEEEEEEEECCCCEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
T ss_conf 95445525458798899999982899599999948975428714899998553589878874587622679445886588
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 g~~~G~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~~i 160 (357)
T d1mppa_ 81 GGANGIYFRDSITVGGATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLI 160 (357)
T ss_dssp CEEEEEEEEEEEEETTEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHHHHHSCCCCCHHHHHHHTTSS
T ss_pred CCEEEEEEEEECCCCCCEECCEEEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCC
T ss_conf 71789998350212660488688999994045423215655433211235545776422244688788789999861565
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~fs~~l~~~~~~G~l~~Gg~d~~~~~~~~~~~pi~~~~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~ilDSGts~~~ 240 (357)
T d1mppa_ 161 SSPVFSVYMNTNDGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVKIDGSDAVSFDGAQAFTIDTGTNFFI 240 (357)
T ss_dssp SSSEEEEECCCSSSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTCCSEE
T ss_pred CCCEEEEEECCCCCCCEEECCCCCHHHCCCCEEEEEECCCCCCCEEEEEEEEEEEECCEEEEECCCCCCEEEECCCCCCC
T ss_conf 55169998336899963987531766727730578721477874368998706998875765328973148613674236
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 lp~~~~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~c~~~~~~~~ 320 (357)
T d1mppa_ 241 APSSFAEKVVKAALPDATESQQGYTVPCSKYQDSKTTFSLVLQKSGSSSDTIDVSVPISKMLLPVDKSGETCMFIVLPDG 320 (357)
T ss_dssp EEHHHHHHHHHHHCTTCEEETTEEEEEHHHHTTCCCEEEEEEECTTCSSCEEEEEEEGGGGEEECSSSSCEEEESEEEES
T ss_pred CCHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCEEEEECHHHEEEEECCCCCEEEEEECCCC
T ss_conf 98999999999856775346885102420144568507999811565356679998659928996589988999984799
Q ss_pred ------------------------------------E
Q ss_conf ------------------------------------8
Q 002647 518 ------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------a 518 (897)
-
T Consensus 321 ~~~~ILG~~fl~~~yvvfD~~~~~iGfA~~~~~~~~~ 357 (357)
T d1mppa_ 321 GNQFIVGNLFLRFFVNVYDFGKNRIGFAPLASGYEND 357 (357)
T ss_dssp SSCCEEEHHHHTTEEEEEETTTTEEEEEEBCTTTCCC
T ss_pred CCCEEECHHHHCCEEEEEECCCCEEEEEECCCCCCCC
T ss_conf 9999945697397999998999999999998678998
|
| >d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Alkaline cellulase K catalytic domain species: Bacillus sp. [TaxId: 1409]
Probab=100.00 E-value=0 Score=26872.43 Aligned_cols=1 Identities=0% Similarity=-0.659 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~p~~a~~~~~l~~~G~~~l~d~~G~~v~lrGv~~~~~~w~~~~~~~~~~~~l~~~~G~N~VRlp~~~~~~~~ 80 (357)
T d1g01a_ 1 PAGMQAVKSPSEAGALQLVELNGQLTLAGEDGTPVQLRGMSTHGLQWFGEIVNENAFVALSNDWGSNMIRLAMYIGENGY 80 (357)
T ss_dssp CTTCTTCCCHHHHCSCEEEEETTEEEEECTTSCBCCCEEEEESCHHHHGGGCSHHHHHHHHTTSCCSEEEEEEESSSSST
T ss_pred CCCCCCCCCCCCCCCCCEEEECCEEEEECCCCCEEEEEEEECCCCHHCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCC
T ss_conf 98544567965346788599738589999999999999885676200465568999999998649977988636557887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~ld~~V~~a~~~GiyVIlD~H~~~~~~~~~~~~~~~~~~W~~iA~ry~~~~~~~~v~~el~NEP~~~~~~~~ 160 (357)
T d1g01a_ 81 ATNPEVKDLVYEGIELAFEHDMYVIVDWHVHAPGDPRADVYSGAYDFFEEIADHYKDHPKNHYIIWELANEPSPNNNGGP 160 (357)
T ss_dssp TTCTTHHHHHHHHHHHHHHTTCEEEEEEECCSSSCTTSGGGTTHHHHHHHHHHHHTTCTTGGGEEEECCSCCCSCCTTSC
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC
T ss_conf 44989999999999999978988998613268888880355666779999999975476237999987516353567654
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~IR~~~~~~iiv~~~~w~~~~~~~~~~~~~~~nvvys~H~Y~~~~~~~~~~~~~~~~~~ 240 (357)
T d1g01a_ 161 GLTNDEKGWEAVKEYAEPIVEMLREKGDNMILVGNPNWSQRPDLSADNPIDAENIMYSVHFYTGSHGASHIGYPEGTPSS 240 (357)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHTCHHHHHHSCCSSSSEEEEEEEETTTSCCCCCCCCTTCCGG
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHH
T ss_conf 56676136899999999999999853993499804876665200013557999779998872675677667777566447
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~g~Pv~vgEfG~~~~~~~~~~~~~~~~~~~~~~~~~~isw~~W~~~~~~~~~~~~~~~~~~~~~~~ 320 (357)
T d1g01a_ 241 ERSNVMANVRYALDNGVAVFATEWGTSQANGDGGPYFDEADVWLNFLNKHNISWANWSLTNKNEISGAFTPFELGRTDAT 320 (357)
T ss_dssp GCCCHHHHHHHHHHTTCCEEEEEEESSBTTTBSCCCHHHHHHHHHHHHHTTCCEEEEEECCSSSTTCSBCCCCTTSCCCC
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 78999999999997699889983377678887876789999999999974993589957588776433067665566754
Q ss_pred ------------------------------------E
Q ss_conf ------------------------------------8
Q 002647 518 ------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~~~w~~~~l~~sG~~v~~~l~g~~~~~~~~~ 357 (357)
T d1g01a_ 321 DLDPGANQVWAPEELSLSGEYVRARIKGIEYTPIDRT 357 (357)
T ss_dssp CSSCCTTCCCCGGGBCHHHHHHHHHHHTCCCCCCCCC
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
T ss_conf 5566667888765615467999998536778885789
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=26871.67 Aligned_cols=1 Identities=0% Similarity=0.072 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (357)
T d1db3a_ 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD 80 (357)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCCC
T ss_conf 98899968886899999999997869899997897555556688887403303897599982067979988887525987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK 160 (357)
T d1db3a_ 81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK 160 (357)
T ss_dssp EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHH
T ss_pred EEEEEECCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 89985203553446559999999999999999999998489988689999845651889888958999999988699999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~ 240 (357)
T d1db3a_ 161 LYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMML 240 (357)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCEEECCEEECHHHHHHHHHH
T ss_conf 99999999999996997899996454599877677714789999999838972699799980444443044878999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 320 (357)
T d1db3a_ 241 QQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLL 320 (357)
T ss_dssp SSSSCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCCCC-CCCC
T ss_pred HCCCCCEEEECCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCC
T ss_conf 27899759978998164599999999983976321455331000233211222433566760376155357886446404
Q ss_pred ------------------------------------E
Q ss_conf ------------------------------------8
Q 002647 518 ------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------a 518 (897)
-
T Consensus 321 ~d~skakk~LGw~P~~sl~egI~~~I~~~l~~~kk~~ 357 (357)
T d1db3a_ 321 GDPTKAHEKLGWKPEITLREMVSEMVANDLEAAKKHS 357 (357)
T ss_dssp BCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 4889999997998689899999999999999970129
|
| >d2amxa1 c.1.9.1 (A:20-376) Adenosine deaminase (ADA) {Plasmodium yoelii [TaxId: 5861]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Adenosine/AMP deaminase domain: Adenosine deaminase (ADA) species: Plasmodium yoelii [TaxId: 5861]
Probab=100.00 E-value=0 Score=26876.63 Aligned_cols=1 Identities=0% Similarity=-1.590 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~lPK~eLH~HL~Gsi~~~~l~~la~~~~i~~~~~~~~~~~~~~~~~~~~~l~ 80 (357)
T d2amxa1 1 EIKFLKKEDVQNIDLNGMSKKERYEIWRRIPKVELHCHLDLTFSAEFFLKWARKYNLQPNMSDDEILDHYLFTKEGKSLA 80 (357)
T ss_dssp SCCCCCHHHHTTCCGGGCCHHHHHHHHHHSCEEECCBBGGGCCCHHHHHHHHHHTTCCTTSCHHHHHHHHCCCSTTCCHH
T ss_pred CCCHHHHCCCCCCCHHCCCCHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHH
T ss_conf 93455522555687000470789999983908898667878999999999999729799999499999874567626599
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~f~~~~~~~~~l~~~~e~~~~~~~~~~~~~~~~~v~y~Elr~~p~~~~~~~g~~~~~v~~~i~~g~~~a~~~~~~~~~~~ 160 (357)
T d2amxa1 81 EFIRKAISVSDLYRDYDFIEDLAKWAVIEKYKEGVVLMEFRYSPTFVSSSYGLDVELIHKAFIKGIKNATELLNNKIHVA 160 (357)
T ss_dssp HHHHHHHHHGGGCCSHHHHHHHHHHHHHHHHHTTEEEEEEEECHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTSSEEE
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 99999878778733899999999999999998415161133454324545676457799999999999987439845898
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 l~~~~~~~~~~~~~~~~~~~a~~~~~~vvGidl~g~e~~~~~~~~~f~~ar~~gl~it~HaGE~~~~~~~~~i~~ai~~l 240 (357)
T d2amxa1 161 LICISDTGHAAASIKHSGDFAIKHKHDFVGFDHGGREIDLKDHKDVYHSVRDHGLHLTVHAGEDATLPNLNTLYTAINIL 240 (357)
T ss_dssp EEEECCCCCSHHHHHTTTHHHHHTTTTEEEEECCSSCCCCGGGHHHHHHHHHTTCEEEEEESCCTTCSSSHHHHHHHHTS
T ss_pred EEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCC
T ss_conf 63210266125557999999996388657312467766623469999999831876443455458999747899999704
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~RIgHGv~~~~d~~l~~~l~~~~I~leiCPtSN~~~~~~~~~~~HP~~~l~~~Gv~v~l~TDDp~~f~t~ls~ey~~~ 320 (357)
T d2amxa1 241 NVERIGHGIRVSESDELIELVKKKDILLEVCPISNLLLNNVKSMDTHPIRKLYDAGVKVSVNSDDPGMFLSNINDNYEKL 320 (357)
T ss_dssp CCSEEEECGGGGGCHHHHHHHHHHTCEEEECHHHHHHTTSSSCSTTCTHHHHHHTTCEEEECCBCHHHHTCCHHHHHHHH
T ss_pred CCCCCCCCHHEECCHHHHHHHHHHCCEEEECCCCHHHHCCCCCCCCCHHHHHHHCCCEEEEECCCCHHHCCCHHHHHHHH
T ss_conf 97313652430058788998887185389887500242358970028999999889959995899412178879999999
Q ss_pred ------------------------------------E
Q ss_conf ------------------------------------8
Q 002647 518 ------------------------------------G 518 (897)
Q Consensus 518 ------------------------------------a 518 (897)
-
T Consensus 321 ~~~~~ls~~el~~l~~nsi~~sF~~~~~K~~l~~~~~ 357 (357)
T d2amxa1 321 YIHLNFTLEEFMIMNNWAFEKSFVSDDVKSELKALYF 357 (357)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHC
T ss_pred HHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
T ss_conf 9981989999999999999986899999999998659
|
| >d16vpa_ d.180.1.1 (A:) Conserved core of transcriptional regulatory protein vp16 {Herpes simplex virus type 1 [TaxId: 10298]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Conserved core of transcriptional regulatory protein vp16 superfamily: Conserved core of transcriptional regulatory protein vp16 family: Conserved core of transcriptional regulatory protein vp16 domain: Conserved core of transcriptional regulatory protein vp16 species: Herpes simplex virus type 1 [TaxId: 10298]
Probab=100.00 E-value=0 Score=26810.44 Aligned_cols=1 Identities=0% Similarity=-1.523 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~r~psPp~~~sp~~Ly~rLl~eL~F~eGp~Lls~le~wNeDLFSclP~n~dLY~~~~~LSt~~~eVi~~~~~~~p~~~~i 80 (356)
T d16vpa_ 1 SRMPSPPMPVPPAALFNRLLDDLGFSAGPALCTMLDTWNEDLFSALPTNADLYRECKFLSTLPSDVVEWGDAYVPERTQI 80 (356)
T ss_dssp CCSCCCCCCCCHHHHHHHHHHHHTCTTHHHHHHHHHHCCCCCSTTSCCCGGGGTTCGGGCSCHHHHHHHHHHCCCCCSSC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCC
T ss_conf 99998988789799999999873998517899999984205550377874676531055389899999876179987750
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 dL~ahG~~~~P~~Pa~~eeLP~Yv~avq~fF~sELrAREe~Y~~Ll~~YC~AL~~yLr~sa~~~~r~~~~~~~~~~~~~~ 160 (356)
T d16vpa_ 81 DIRAHGDVAFPTLPATRDGLGLYYEALSRFFHAELRAREESYRTVLANFCSALYRYLRASVRQLHRQAHMRGRDRDLGEM 160 (356)
T ss_dssp CTTCCCSSCCCCCCSSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHH
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
T ss_conf 01478998899999882353899999999999999998999999999999999999999887751310344541679999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~rq~i~~rYYRE~arLArllylHLYls~tRevswrl~A~Q~~~q~vF~~L~y~W~q~RQf~ClFhPvlfnhGvV~leg~p 240 (356)
T d16vpa_ 161 LRATIADRYYRETARLARVLFLHLYLFLTREILWAAYAEQMMRPDLFDCLCCDLESWRQLAGLFQPFMFVNGALTVRGVP 240 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHTTEEEEESCSHHHHSSCCSCSBCCSEEEETTEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCEEEEECCCEEEECCEEEECCCC
T ss_conf 99999999999999999999999999999999999999986132634605740113432367535335417635667987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 L~a~~Lr~~Ny~R~eLGLPlvR~~lvEE~~~pL~~~P~fs~~~pRssGyl~~~IraKmeaYS~~hp~~~~~~~~dH~YaR 320 (356)
T d16vpa_ 241 IEARRLRELNHIREHLNLPLVRSAATEEPGAPLTTPPTLHGNQARASGYFMVLIRAKLDSYSSFTTSPSEAVMREHAYSR 320 (356)
T ss_dssp CCHHHHHHHHHHHHHTTCCCCBCTTTSCTTSCSCCCCCCCTTSCCHHHHHHHHHHHHHTSTTC-----------------
T ss_pred CCHHHHHHHHHHHHHCCCCEEEHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 88899988889998718840110100468987425886556785305689999999864420368888875444576447
Q ss_pred -----------------------------------E
Q ss_conf -----------------------------------8
Q 002647 518 -----------------------------------G 518 (897)
Q Consensus 518 -----------------------------------a 518 (897)
-
T Consensus 321 ~~~~~nYGst~eaml~~~~~~~p~~~~~~~~r~~~~ 356 (356)
T d16vpa_ 321 APTKNNYGSTIEGLLDLPDDDAPEEAGLAAPRLSFL 356 (356)
T ss_dssp ----------------------------CCCEEEEC
T ss_pred CCCCCCCCCCHHHCCCCCCCCCHHHHCCCCCCCCCC
T ss_conf 888888773232101699999635532234321359
|
| >d1r3sa_ c.1.22.1 (A:) Uroporphyrinogen decarboxylase, UROD {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: UROD/MetE-like family: Uroporphyrinogen decarboxylase, UROD domain: Uroporphyrinogen decarboxylase, UROD species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=26802.86 Aligned_cols=1 Identities=0% Similarity=-1.391 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~ne~~l~al~g~~~dr~PVw~MrqAGRylpey~~~r~~~~f~e~~~~pe~~ae~tl~p~~~~~~DaaiifsDil~~ 80 (356)
T d1r3sa_ 1 FPELKNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAAQDFFSTCRSPEACCELTLQPLRRFPLDAAIIFSGILVV 80 (356)
T ss_dssp CCCCSCCHHHHHHHTCCCSSCCBCCTTSSSTTSHHHHHHHHTSCHHHHHTCHHHHHHHHHHHHHHSCCSCEECCCCTTHH
T ss_pred CCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCHH
T ss_conf 99764489999975998999998888445425889999871289999855999999998448986795425622442101
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~ealG~~v~f~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~l~~v~eai~~~~~~l~~~~pliGf~ggP~Tla~yli~~~~ 160 (356)
T d1r3sa_ 81 PQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGYVFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGG 160 (356)
T ss_dssp HHHTTCCCEEETTTEEECSSCCCSGGGGGGSCCGGGHHHHTHHHHHHHHHHHHHHTTSSCEEEEEECHHHHHHHHHHSSC
T ss_pred HHHCCCEEEECCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHCCC
T ss_conf 34228635644889866776433202332101100002144899999999998735565663032031888999872134
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~pe~~~~ll~~lt~~~~~~~~~qi~aGad~i~ifDs~a~~l~~~~~~~~~~~~~~~i~~~i~~~~~~ 240 (356)
T d1r3sa_ 161 SSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLRE 240 (356)
T ss_dssp CSSCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 21378898876303577889999999988999999860566540203520121357888888899999999999875101
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~i~~~~~~~~~l~~~~~~g~d~is~D~~~~l~~~~~~~~~~i~lqGNldP~~L~~~~e~i~~~~~~~l~~~~~ 320 (356)
T d1r3sa_ 241 AGLAPVPMIIFAKDGHFALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEIGQLVKQMLDDFGP 320 (356)
T ss_dssp TTCCCCCEEEEETTCGGGHHHHTTSSCSEEECCTTSCHHHHHHHHCSSSEEEEEECGGGGGSCHHHHHHHHHHHHHHHCS
T ss_pred CCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHHCC
T ss_conf 24777302101044787888874248561254235799999998489832882888899859999999999999998189
Q ss_pred -----------------------------------E
Q ss_conf -----------------------------------8
Q 002647 518 -----------------------------------G 518 (897)
Q Consensus 518 -----------------------------------a 518 (897)
-
T Consensus 321 ~~~I~nlGhGI~p~tp~env~a~v~~vr~~~k~~~~ 356 (356)
T d1r3sa_ 321 HRYIANLGHGLYPDMDPEHVGAFVDAVHKHSRLLRQ 356 (356)
T ss_dssp SSEEEEESSCCCTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEECCCCCCCCCCHHHHHHHHHHHHHHCHHHCC
T ss_conf 994896999759899999999999999996887459
|
| >d1lbqa_ c.92.1.1 (A:) Ferrochelatase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Chelatase-like superfamily: Chelatase family: Ferrochelatase domain: Ferrochelatase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=26799.73 Aligned_cols=1 Identities=100% Similarity=1.301 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
|
T Consensus 1 k~~tgVLL~nlGtP~s~~~V~~yL~~fl~D~~vi~~p~~~~~~l~~~I~~~R~~k~a~~Y~~IgggSPL~~~t~~qa~~l 80 (356)
T d1lbqa_ 1 RSPTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKYQKTIAKYIAKFRTPKIEKQYREIGGGSPIRKWSEYQATEV 80 (356)
T ss_dssp CCCEEEEEEECCCCSSGGGHHHHHHHHTTCCSSSCCCSSSHHHHHHHHHHHHHHHHHHHHHHTTSSCSHHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 99659999878899986899999999758986446878899998656475687999999998189881089999989999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~L~~~~~~~~~~~V~~amry~~P~i~~~l~~l~~~G~~~ilvlPlyPqyS~sTt~s~~~~v~~~l~~~~~~~~~~~~~ 160 (356)
T d1lbqa_ 81 CKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLKDGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSV 160 (356)
T ss_dssp HHHHHHHCGGGCCEEEEEEESSSSSCHHHHHHHHHTTTCCEEEEEESCSSCCTTTHHHHHHHHHHHHHHHCTTCCSEEEE
T ss_pred HHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 98850233435772168873146320888999998579864378844234427888899999999988750102566426
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 I~~~~~~p~yI~a~a~~i~~~l~~~~~~~~~~~~LlfS~HgiP~~~~~~gdpY~~q~~~t~~~v~~~l~~~~~~~~~fQS 240 (356)
T d1lbqa_ 161 IDRWPTNEGLIKAFSENITKKLQEFPQPVRDKVVLLFSAHSLPMDVVNTGDAYPAEVAATVYNIMQKLKFKNPYRLVWQS 240 (356)
T ss_dssp ECCCTTCHHHHHHHHHHHHHHHHTSCSTTGGGCEEEEEEECCBHHHHTTTCSHHHHHHHHHHHHHHHTTTCSCEEEEEEC
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEC
T ss_conf 44644312279999999999999767544567379995477653333327874689999999876430566645777640
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 r~g~~~WL~P~t~~~le~l~~g~k~v~v~p~gFvsD~lETL~Eidie~~~~~~gg~~f~~vp~lN~~p~fi~~La~lV~~ 320 (356)
T d1lbqa_ 241 QVGPKPWLGAQTAEIAEFLGPKVDGLMFIPIAFTSDHIETLHEIDLGVIGESEYKDKFKRCESLNGNQTFIEGMADLVKS 320 (356)
T ss_dssp CCSSSCBCSCBHHHHHHHHGGGCSCEEEECTTCSSCCHHHHTCCCCCCCTTCTTGGGEEECCCCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHH
T ss_conf 45677777875599999840489748998885242234449887777999971887499868998998999999999999
Q ss_pred -----------------------------------E
Q ss_conf -----------------------------------8
Q 002647 518 -----------------------------------G 518 (897)
Q Consensus 518 -----------------------------------a 518 (897)
-
T Consensus 321 ~l~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (356)
T d1lbqa_ 321 HLQSNQLYSNQLPLDFALGKSNDPVKDLSLVFGNHE 356 (356)
T ss_dssp HHHHCCSSCTTHHHHHHHCCCSSCCSCHHHHSBCCC
T ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC
T ss_conf 865685567446644334768871118698616899
|
| >d1l0wa3 d.104.1.1 (A:105-294,A:415-580) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-1 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Aspartyl-tRNA synthetase (AspRS) species: Thermus thermophilus, AspRS-1 [TaxId: 274]
Probab=100.00 E-value=0 Score=26799.57 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~p~~~~~~~~~~~~~~~~~Rl~~R~LdLR~~~~~~ilr~Rs~i~~~iR~ff~~~gfiEV~TP~L~~~~~eg~~~~~~ 80 (356)
T d1l0wa3 1 TPPFPVDAGWRGEEEKEASEELRLKYRYLDLRRRRMQENLRLRHRVIKAIWDFLDREGFVQVETPFLTKSTPEGARDFLV 80 (356)
T ss_dssp CCSSCCSSGGGTCCCCCCCHHHHHHTHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTTCEECCCCSSBCCCSSSSCCCEE
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHH
T ss_conf 96962685445654456698887413365117887999999999999999999988898999898124677764432002
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~yL~~Spel~lk~ll~~g~~~Vf~i~~~FRaE~~~t~H~~EFtmLE~e~~~~~~~~~m~~~E~li~~v~~~ 160 (356)
T d1l0wa3 81 PYRHEPGLFYALPQSPQLFKQMLMVAGLDRYFQIARCFRDEDLRADRQPDFTQLDLEMSFVEVEDVLELNERLMAHVFRE 160 (356)
T ss_dssp ECTTSTTEEEECCSCSHHHHHHHHHTTCSEEEEEEEEECCCCCCSSCCSEEEEEEEEEESCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 22113201117772856777775232368679982123522268754045668877666788878999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~f~r~~~~~a~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~f~~~~p~~~~~~~~~~~~~~ 240 (356)
T d1l0wa3 161 ALGVELPLPFPRLSYEEAMERYGSDKPDLRREGFRFLWVVDFPLLEWDEEEEAWTYMHHPFTSPHPEDLPLLEKDPGRVR 240 (356)
T ss_dssp HTCCCCCSSCCEEEHHHHHHHHSSSSCCCSCCSCCEEEEECCBSBCCCTTTSCCCBSSCTTBCBCSTTTTHHHHCGGGCB
T ss_pred HHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHCCEEEEECCCCCCCHHHHCHHHCCCCCCE
T ss_conf 72877778977511776677870474767777566542036653113110012233437743687665100103888620
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 a~~FdL~~~G~ElanG~~r~~d~~~~~~r~~~~~~~~~~~~~~~~~yl~a~~~G~PP~~G~glGldRLlm~l~g~~~Ird 320 (356)
T d1l0wa3 241 ALAYDLVLNGVEVGGGSIRIHDPRLQARVFRLLGIGEEEQREKFGFFLEALEYGAPPHGGIAWGLDRLLALMTGSPSIRE 320 (356)
T ss_dssp BSEEEEEETTEEEEEEEEBCCCHHHHHHHHHHHTCCTTTHHHHTHHHHHHTTBTCCCEEEEEEEHHHHHHHHHTCSSGGG
T ss_pred EEEEECCCCCEEEECCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHCCCCCHHH
T ss_conf 21230233878862107871748999999999767832357789999999667989962377709999999809995885
Q ss_pred -----------------------------------E
Q ss_conf -----------------------------------8
Q 002647 518 -----------------------------------G 518 (897)
Q Consensus 518 -----------------------------------a 518 (897)
-
T Consensus 321 vi~FPR~~~r~~p~~~~~~~~~~~~~~~~~~~~~~~ 356 (356)
T d1l0wa3 321 VIAFPKNKEGKDPLTGAPSPVPEEQLRELGLMVVRP 356 (356)
T ss_dssp GSSSCCCTTSCBTTTTBSEECCHHHHHHHTEEECCC
T ss_pred EECCCCCCCCCCCCCCCCCCCCHHHHHHCCEEECCC
T ss_conf 346899999998667899989999998668462185
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=100.00 E-value=0 Score=26799.20 Aligned_cols=1 Identities=0% Similarity=-1.158 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~ 80 (356)
T d1rkxa_ 1 INNSFWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQP 80 (356)
T ss_dssp CCHHHHTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCHH
T ss_conf 97344188989997888779999999999779989999789986177776640146876998405685760023430202
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k 160 (356)
T d1rkxa_ 81 EIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSK 160 (356)
T ss_dssp SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 44444421565653246775353322334035666643045543222222212234565433322234568988432432
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~a 240 (356)
T d1rkxa_ 161 GCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSG 240 (356)
T ss_dssp HHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHH
T ss_pred CCCHHHHHHHHHHCCCCHHCCCCCCEEEECCCCCEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCH
T ss_conf 33204566776521342010355733774267776488855143799999999718996688621342122123342200
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~skak~~LGw~P~~~ 320 (356)
T d1rkxa_ 241 YLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEAHYLKLDCSKAKMQLGWHPRWN 320 (356)
T ss_dssp HHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-------CCCCCCBCCHHHHHHHCCCCCCC
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEECHHHHHHHHCCCCCCC
T ss_conf 23455540345654444332222223322110245666787489862797179999875765686999999879986888
Q ss_pred -----------------------------------E
Q ss_conf -----------------------------------8
Q 002647 518 -----------------------------------G 518 (897)
Q Consensus 518 -----------------------------------a 518 (897)
-
T Consensus 321 l~egi~~ti~wyk~~~~~~~~~~~~~~~~~~~~~~~ 356 (356)
T d1rkxa_ 321 LNTTLEYIVGWHKNWLSGTDMHEYSITEINNYMNTK 356 (356)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
T ss_conf 999999999999998748998998999999971589
|
| >d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Adenylylsulfate reductase A subunit species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=100.00 E-value=0 Score=26798.97 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~e~~e~DVlIIG~G~AGl~AA~~aa~~~~~~G~~V~vieK~~~~gg~s~~~g~~~~~~~~~~~~ 80 (356)
T d1jnra2 1 VYYPKKYELYKADEVPTEVVETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERSGAVAQGLSAINTYIDLTG 80 (356)
T ss_dssp CCCCSSCCCCCGGGSCEEEEECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTTTCSTTTTCEEEESCCCCSSS
T ss_pred CCCCCCHHHHCCCCCCCEEEECCEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCC
T ss_conf 97775033213556776687649899898889999999999978867697999967889997359877899974233323
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~Ds~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (356)
T d1jnra2 81 RSERQNTLEDYVRYVTLDMMGLAREDLVADYARHVDGTVHLFEKWGLPIWKTPDGKYVREGQWQIMIHGESYKPIIAEAA 160 (356)
T ss_dssp SBSCCCCHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCBCBCTTSCBCBSSSSCEEEEETTHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHH
T ss_conf 56766899999999998606876188999988741123556876097742013323322333100246640788999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~i~~~~~~~~l~~~~~~~~~v~~~~~~~~~~G~~~~i~Ak~VILATGG~~~~~~~~~~~~~~~~~~~~~~~tG 240 (356)
T d1jnra2 161 KMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATLLFRPRSTGEAAGRTWYAIFDTG 240 (356)
T ss_dssp HHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSSSCCSCCSGGGGCCSSCTTCBS
T ss_pred HHHHCCEEEEEEEEEEEEEEECCCCCCEEEEEEEEEECCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 86304517899999887653024665214568877404837984078799917875331357777644564447987577
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 dG~~ma~~aGa~l~~~~~~q~~p~~~~~~~~~~~~~~~~~~~~~~~gl~~~g~~~~~~g~rf~~~~~~~g~~a~~~~~~~ 320 (356)
T d1jnra2 241 SGYYMGLKAGAMLTQAGFWVCGPEDLMPEEYAKLFPLKYNRMTTVKGLFAIGDCAGANPHKFSSGSFTEGRIAAKAAVRF 320 (356)
T ss_dssp HHHHHHHHHTCCEESCEECCCCCTTTCCHHHHTTCSSCCTTBCSSBTEEECGGGBCSCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 09999998534524787247616645782432456567664004352121420017766557355655412328999999
Q ss_pred -----------------------------------E
Q ss_conf -----------------------------------8
Q 002647 518 -----------------------------------G 518 (897)
Q Consensus 518 -----------------------------------a 518 (897)
-
T Consensus 321 i~~~~~~~~~~~~~~~~~~~~i~~p~~~~~~~~~~~ 356 (356)
T d1jnra2 321 ILEQKPNPEIDDAVVEELKKKAYAPMERFMQYKDLS 356 (356)
T ss_dssp HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHGGGC
T ss_pred HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 972899887788999999988776899998507999
|
| >d1v53a1 c.77.1.1 (A:1-356) 3-isopropylmalate dehydrogenase, IPMDH {Bacillus coagulans [TaxId: 1398]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Isocitrate/Isopropylmalate dehydrogenase-like superfamily: Isocitrate/Isopropylmalate dehydrogenase-like family: Dimeric isocitrate & isopropylmalate dehydrogenases domain: 3-isopropylmalate dehydrogenase, IPMDH species: Bacillus coagulans [TaxId: 1398]
Probab=100.00 E-value=0 Score=26798.94 Aligned_cols=1 Identities=0% Similarity=-0.426 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 m~~rI~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~i~~~~~~~G~~~~~~~g~~lp~et~e~i~~~dail~Gav~~p~~~ 80 (356)
T d1v53a1 1 MKMKLAVLPGDGIGPEVMDAAIRVLKTVLDNDGHEAVFENALIGGAAIDEAGTPLPEETLDICRRSDAILLGAVGGPKWD 80 (356)
T ss_dssp CCEEEEEEEESTTHHHHHHHHHHHHHHHHTTSSCCEEEEECCCTHHHHHHHSSSSCHHHHHHHHTSSEEEEEECCCGGGS
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCCCCHHHHHHHHHCCCEEEECCCCCCCC
T ss_conf 97079998878765999999999999998624997499999556899997499288999999986082799256798867
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~lR~~ldlyanvRPv~~~~gi~~~~p~~~~~~~~vD~vivREnteg~Y~g~~~~~~~~~~~~~~~~~ 160 (356)
T d1v53a1 81 HNPASLRPEKGLLGLRKEMGLFANLRPVKAYATLLNASPLKRERVENVDLVIVRELTGGLYFGRPSERRGPGENEVVDTL 160 (356)
T ss_dssp SSCGGGCHHHHHHHHHHHHTCCEEEEEEECCGGGTTTSSBCHHHHTTCEEEEEEECSSBTTTCSCEEEESSTTCEEEEEE
T ss_pred CCCCCCCCCHHHHHHHHHHCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCEECCCCCCCCCCCC
T ss_conf 78988583021689998708725566665430344579977667788239996046766065305330224652002200
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~t~~~~~ri~r~af~~A~~r~kkVt~v~K~nv~~~~~~~~~~~~eva~eyp~I~~~~~~vD~~~~~lv~~P~~fdViv~ 240 (356)
T d1v53a1 161 AYTREEIERIIEKAFQLAQIRRKKLASVDKANVLESSRMWREIAEETAKKYPDVELSHMLVDSTSMQLIANPGQFDVIVT 240 (356)
T ss_dssp EEEHHHHHHHHHHHHHHHHHTTSEEEEEECTTTCHHHHHHHHHHHHHHTTCTTSEEEEEEHHHHHHHHHHCGGGCSEEEE
T ss_pred EEEEEEEEEHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHCCCCCCEEEC
T ss_conf 02321430034577767874598465775254102450586999999836898699998836678898722344664532
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~Nl~GDIlSDl~a~l~GglGl~~s~ni~~d~~a~fEp~HGsapdiaGk~~aNP~a~ils~ammL~~~lg~~~~A~~i~~A 320 (356)
T d1v53a1 241 ENMFGDILSDEASVITGSLGMLPSASLRSDRFGMYEPVHGSAPDIAGQGKANPLGTVLSAALMLRYSFGLEKEAAAIEKA 320 (356)
T ss_dssp CHHHHHHHHHHHTTTTSCTTSCEEEEECSSSCEEEEESSCCCGGGTTSSCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 67888888899988736763111200268731463378887234448996592999999999998637987999999999
Q ss_pred -----------------------------------E
Q ss_conf -----------------------------------8
Q 002647 518 -----------------------------------G 518 (897)
Q Consensus 518 -----------------------------------a 518 (897)
-
T Consensus 321 v~~~l~~g~~T~Dl~~~~gg~~~T~e~~dav~~~L~ 356 (356)
T d1v53a1 321 VDDVLQDGYCTGDLQVANGKVVSTIELTDRLIEKLN 356 (356)
T ss_dssp HHHHHHTTEESSSSCCTTCEECCHHHHHHHHHHHCC
T ss_pred HHHHHHCCCCCCCCCCCCCCEECHHHHHHHHHHHCC
T ss_conf 999998599473556679970379999999998429
|
| >d2ebsa2 b.69.13.1 (A:431-786) Oligoxyloglucan reducing end-specific cellobiohydrolase {Yeast (Geotrichum sp. M128) [TaxId: 203496]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Oligoxyloglucan reducing end-specific cellobiohydrolase family: Oligoxyloglucan reducing end-specific cellobiohydrolase domain: Oligoxyloglucan reducing end-specific cellobiohydrolase species: Yeast (Geotrichum sp. M128) [TaxId: 203496]
Probab=100.00 E-value=0 Score=26798.70 Aligned_cols=1 Identities=0% Similarity=-1.853 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~w~~~~~g~ee~~~~~l~spp~g~~l~s~~gd~~gf~~~dl~~p~~~~~~p~~~~~~~id~a~~~p~~ivr~G~~~~ 80 (356)
T d2ebsa2 1 WAPSWYLQIDGIEENAILSLRSPKSGAALLSGIGNISGMKHDDLTKPQKMFGAPQFSNLDSIDAAGNFPNVVVRAGSSGH 80 (356)
T ss_dssp CCCCEEECCTTCBCCBEEEEECCSSSSSEEEEESSSBCBEESCTTSCCCBCCSSCCSEEEEEEECSSCTTCEEEEEECCC
T ss_pred CCCCCEECCCCEEHHHEEEEECCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCHHEEEHHHCCCEEEEEECCCC
T ss_conf 99854576578010000015758999810688864785597458887535268885640120104118956999967788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~StDgG~TW~~~~~~~~g~~~~~~~~g~ia~s~dg~~ivw~~~~~~~~~gv~~StD~G~TW~~~~~~~~~ 160 (356)
T d2ebsa2 81 EYDSACARGAYATDGGDAWTIFPTCPPGMNASHYQGSTIAVDASGSQIVWSTKLDEQASGPWYSHDYGKTWSVPAGDLKA 160 (356)
T ss_dssp CBTTBCTTEEEESSSSSSEEECSCCCTTCSTTCCSCCEEEECTTSCCEEEECCCTTCCSCCEEESSTTSCCBCCEESCCS
T ss_pred CCCCCCCCEEEEECCHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCEEEECCCCCCEEECCCCCCC
T ss_conf 78888872799840522442787688886566446646999458993078731467886449970797113876777888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~i~~d~~~~~~~Ya~~~g~ly~StDgG~TW~~~~~~~~~~~~~~~~v~p~~~g~v~v~~~~~Gl~~StDgG~TWt~i 240 (356)
T d2ebsa2 161 QTANVLSDKVQDGTFYATDGGKFFVSTDGGKSYAAKGAGLVTGTSLMPAVNPWVAGDVWVPVPEGGLFHSTDFGASFTRV 240 (356)
T ss_dssp CCSCEEECSSSTTCEEEEETTEEEEESSTTSEEEECCBTCCCCCCCCCEECTTSTTCEEEEETTTEEEEESSTTSBCEEE
T ss_pred CCCEEEEECCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEECCCCCCEEEECCCCCEEEEC
T ss_conf 73189996767965785046319994787654532256775454036888741699502112445259922776348981
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~g~~~~~~~~GvyrS~D~G~TW~~Ind~~~~~g~~~~i~~Dp~~~grvYv 320 (356)
T d2ebsa2 241 GTANATLVSVGAPKSKSDGKKASAPSAVFIWGTDKPGSDIGLYRSDDNGSTWTRVNDQEHNYSGPTMIEADPKVYGRVYL 320 (356)
T ss_dssp SSCEEEEEEEEEEC---------CCEEEEEEEESSTTSCSEEEEESSTTSSCEECCCTTSCTTCEEEEEECTTSTTCEEE
T ss_pred CCCCCCCCEECCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCEECCCCCCCCCCEEEEECCCCCCCEEEE
T ss_conf 47888764013333566454678875599999864798076999969997934995997777752289718976998999
Q ss_pred -----------------------------------E
Q ss_conf -----------------------------------8
Q 002647 518 -----------------------------------G 518 (897)
Q Consensus 518 -----------------------------------a 518 (897)
-
T Consensus 321 gT~GrGi~y~~~~~~~s~~~~~~~~~~~~~~~~~~~ 356 (356)
T d2ebsa2 321 GTNGRGIVYADLTNKKSNEEKSTAKCANGQKGTHCY 356 (356)
T ss_dssp EEBSSCEEEEECCC----CCCCEEEETTCCSSSCCC
T ss_pred EECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 968876799967788577887420127888887679
|
| >d1jaka1 c.1.8.6 (A:151-506) beta-N-acetylhexosaminidase {Streptomyces plicatus [TaxId: 1922]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-N-acetylhexosaminidase catalytic domain domain: beta-N-acetylhexosaminidase species: Streptomyces plicatus [TaxId: 1922]
Probab=100.00 E-value=0 Score=26798.57 Aligned_cols=1 Identities=0% Similarity=-0.959 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 f~~RG~mlD~aR~f~~~~~i~~~id~ma~~K~N~lh~Hl~D~~~~r~e~~~~p~l~~~ga~~~~~~~~~~~yT~~di~~i 80 (356)
T d1jaka1 1 YAWRSAMLDVSRHFFGVDEVKRYIDRVARYKYNKLHLHLSDDQGWRIAIDSWPRLATYGGSTEVGGGPGGYYTKAEYKEI 80 (356)
T ss_dssp CSEEEEEEECSSSCCCHHHHHHHHHHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTSCCTTSSCCCCBCHHHHHHH
T ss_pred CCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEECCCCHHHHCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 98438678767998599999999999998299079999864887610016873465436756667788885289999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 v~ya~~rgI~viPEid~PgH~~~~~~~~pel~~~~~~~~~~~~~~~~~~~l~~~~~~t~~f~~~v~~E~~~lfp~~~~Hi 160 (356)
T d1jaka1 81 VRYAASRHLEVVPEIDMPGHTNAALASYAELNCDGVAPPLYTGTKVGFSSLCVDKDVTYDFVDDVIGELAALTPGRYLHI 160 (356)
T ss_dssp HHHHHHTTCEEEEECCCSSSCHHHHHHCGGGSTTSCCCCCCCSCCCSCCCCCTTCHHHHHHHHHHHHHHHHTCCSSEEEC
T ss_pred HHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 99999729868644777304679987584002568998644466778865566856789999999999987515507986
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 GgDE~~~~~~~~~~~f~~~~~~~v~~~gk~~~~W~e~~~~~~~~~~vV~~W~~~~~~~~~~~~~~~~~~~G~~vI~s~~~ 240 (356)
T d1jaka1 161 GGDEAHSTPKADFVAFMKRVQPIVAKYGKTVVGWHQLAGAEPVEGALVQYWGLDRTGDAEKAEVAEAARNGTGLILSPAD 240 (356)
T ss_dssp CCCCCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEGGGGGSCCCTTCEEEECCCTTSCHHHHHHHHHHHHTTCEEEECCTT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCEEECCCC
T ss_conf 00244444078999999999999998599458740013678988867887730356763267999999809969977870
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~Yld~~~~~~~~~~~~w~~~~~~~~~y~~~P~~~~~~~~~~~ilG~e~~lWtE~i~~~~~~~~~~~PR~~AlAEr~Ws~ 320 (356)
T d1jaka1 241 RTYLDMKYTKDTPLGLSWAGYVEVQRSYDWDPAGYLPGAPADAVRGVEAPLWTETLSDPDQLDYMAFPRLPGVAELGWSP 320 (356)
T ss_dssp TTCTTBCSSTTCSSSBCTTCCCCHHHHHSCCGGGSSTTCCGGGEEEEEEEECCTTCCSHHHHHHHHTTHHHHHHHHHHSC
T ss_pred HHEECCCCCCCCCCCCCCCCEEEHHHEEECCCCCCCCCCCHHCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 12020366789987753345122311450366567874521056478855054777998999988775599999998688
Q ss_pred -----------------------------------E
Q ss_conf -----------------------------------8
Q 002647 518 -----------------------------------G 518 (897)
Q Consensus 518 -----------------------------------a 518 (897)
.
T Consensus 321 ~~~~d~~~f~~RL~~~~~~l~~~Gv~y~r~p~~pw~ 356 (356)
T d1jaka1 321 ASTHDWDTYKVRLAAQAPYWEAAGIDFYRSPQVPWT 356 (356)
T ss_dssp GGGCCHHHHHHHHHTTHHHHHHHTCCCCCCTTSCCC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 867999999999999999999779980679999999
|
| >d1w8oa3 b.68.1.1 (A:47-402) Micromonospora sialidase, N-terminal domain {Micromonospora viridifaciens [TaxId: 1881]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Micromonospora sialidase, N-terminal domain species: Micromonospora viridifaciens [TaxId: 1881]
Probab=100.00 E-value=0 Score=26803.38 Aligned_cols=1 Identities=100% Similarity=1.866 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~~~~~g~~g~~~~RiPslv~~~~G~lla~~~~r~~~~~d~~~~~i~~~rS~D~G~TWs~~~~v~~~~~~~~~ 80 (356)
T d1w8oa3 1 GEPLYTEQDLAVNGREGFPNYRIPALTVTPDGDLLASYDGRPTGIGAPGPNSILQRRSTDGGRTWGEQQVVSAGQTTAPI 80 (356)
T ss_dssp CCCCEEEEEEEETTSTTCSCEEEEEEEECTTSCEEEEEEECTTSCSTTSCCEEEEEEESSTTSSCCCCEEEECCBCSSSC
T ss_pred CCCCCCEEECCCCCCCCCEEEEECEEEEECCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCC
T ss_conf 99741200110057688383670789998999999999646489988887329999906899787788873238887764
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~v~~~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~~~~~~~~~~~~~~~~~~~~~ 160 (356)
T d1w8oa3 81 KGFSDPSYLVDRETGTIFNFHVYSQRQGFAGSRPGTDPADPNVLHANVATSTDGGLTWSHRTITADITPDPGWRSRFAAS 160 (356)
T ss_dssp BEEEEEEEEECTTTCCEEEEEEEESSCCTTTCCSCCCTTCTTSCEEEEEEESSTTSSCEEEECGGGSCCSTTCCEEEECS
T ss_pred CCCCCCEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 34466248996899839999964035774443336787787479999983687652104652056655434432123466
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 240 (356)
T d1w8oa3 161 GEGIQLRYGPHAGRLIQQYTIINAAGAFQAVSVYSDDHGRTWRAGEAVGVGMDENKTVELSDGRVLLNSRDSARSGYRKV 240 (356)
T ss_dssp EECEECCSSTTTTCEEEEEEEECTTSCEEEEEEEESSTTSSCEECCCBCSSCCSEEEEECTTSCEEEEECCTTCCSEEEE
T ss_pred CCCEEEEECCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCEEE
T ss_conf 32046000244664045553012236632577752688752001446675543316899257620255642555540577
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~S~D~G~tw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~~S~D~G~tW~~~~~i~~~ 320 (356)
T d1w8oa3 241 AVSTDGGHSYGPVTIDRDLPDPTNNASIIRAFPDAPAGSARAKVLLFSNAASQTSRSQGTIRMSCDDGQTWPVSKVFQPG 320 (356)
T ss_dssp EEESSTTSCCCCCEEEEEEECSSCCCEEEESSTTCCTTCSGGGCEEEEEECCSSSSEEEEEEEESSTTSCCCEEEEEEEE
T ss_pred EEECCCCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCEECCCCCEECCC
T ss_conf 88426887543022014335788787326743665346789809999799998897316999990799155886081799
Q ss_pred -----------------------------------E
Q ss_conf -----------------------------------8
Q 002647 518 -----------------------------------G 518 (897)
Q Consensus 518 -----------------------------------a 518 (897)
|
T Consensus 321 ~~~Ys~~~~~~dg~i~~~ye~g~~~~~~~~~l~~~~ 356 (356)
T d1w8oa3 321 SMSYSTLTALPDGTYGLLYEPGTGIRYANFNLAWLG 356 (356)
T ss_dssp ECCCEEEEECTTSCEEEEECCSSEEEEEEECHHHHT
T ss_pred CCCCCEEEECCCCEEEEEEECCCCCEEEEEEHHHCC
T ss_conf 976863689589989999988997389996289979
|
| >d1vbga1 c.1.12.2 (A:521-876) Pyruvate phosphate dikinase, C-terminal domain {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Phosphoenolpyruvate/pyruvate domain family: Pyruvate phosphate dikinase, C-terminal domain domain: Pyruvate phosphate dikinase, C-terminal domain species: Maize (Zea mays) [TaxId: 4577]
Probab=100.00 E-value=0 Score=26798.93 Aligned_cols=1 Identities=0% Similarity=-1.157 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~~~~~ad~~r~i~i~aNi~~~~e~~~a~~~gadGVGL~RtEflfl~~~~~~~~~~~~i~~p~~ee~~~~~~~~~~ 80 (356)
T d1vbga1 1 SGDLGTFMAWVDDVRKLKVLANADTPDDALTARNNGAQGIGLCRTEHMFFASDERIKAVRQMIMAPTLELRQQALDRLLP 80 (356)
T ss_dssp SCHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCCSEEEEEHHHHHTTCHHHHHHHHHHHHCSSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHCCCCEEEHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 93488999987537764899858999999999847997171777888741886304678987629999999999998788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~q~~~y~~i~~~~~g~pvtiRtlD~~~dk~lp~~~~~~~~~~l~~~~g~dk~~~~~~~~~~~E~NP~LG~RGiR~~l~~p 160 (356)
T d1vbga1 81 YQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGNIEDIVSELCAETGANQEDALARIEKLSEVNPMLGFRGCRLGISYP 160 (356)
T ss_dssp HHHHHHHHHHHHTTTSEEEEECCCSCGGGGSCCSCHHHHHHHHHHHHCCCHHHHHHHHHHHCCSCGGGSSCTHHHHHHSH
T ss_pred HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHCEEEEECHHHH
T ss_conf 78999999999748996699984278776676630567999999871998024554321334688432020455010211
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~f~~ql~Ail~A~~~~~~~~~~~~~~IMiPmV~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~iGiMiEvPsaal~~d~ 240 (356)
T d1vbga1 161 ELTEMQARAIFEAAIAMTNQGVQVFPEIMVPLVGTPQELGHQVTLIRQVAEKVFANVGKTIGYKVGTMIEIPRAALVADE 240 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCCEEEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHH
T ss_conf 21357899999898744545756536550058763999999998887757888873066667435552357289997999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~DF~SIGTNDLtQytla~DRdn~~~~~~~y~~~~~~~~dp~~pav~~~i~~lI~~a~~~~k~~~~~i~vsiCGE~a 320 (356)
T d1vbga1 241 IAEQAEFFSFGTNDLTQMTFGYSRDDVGKFIPVYLAQGILQHDPFEVLDQRGVGELVKFATERGRKARPNLKVGICGEHG 320 (356)
T ss_dssp HTTTCSEEEECHHHHHHHHHTCCTTTGGGTHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEEESGGG
T ss_pred HHHEEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
T ss_conf 96567899953038999999861310000026888630122587547789999999999999988507999699706434
Q ss_pred -----------------------------------E
Q ss_conf -----------------------------------8
Q 002647 518 -----------------------------------G 518 (897)
Q Consensus 518 -----------------------------------a 518 (897)
.
T Consensus 321 sdp~~~~~L~~lGi~~iS~sp~~ip~~k~a~aq~~~ 356 (356)
T d1vbga1 321 GEPSSVAFFAKAGLDYVSCSPFRVPIARLAAAQVLV 356 (356)
T ss_dssp GSHHHHHHHHHTTCSEEEECGGGHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHCC
T ss_conf 799999999987999899890778999999977509
|
| >d1goia2 c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic domain {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Type II chitinase domain: Chitinase B, catalytic domain species: Serratia marcescens [TaxId: 615]
Probab=100.00 E-value=0 Score=26799.21 Aligned_cols=1 Identities=100% Similarity=2.131 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~yy~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~lTHi~yaFa~i~~~g~~~~~~~~~~~~~~~~~~~~~~lK 80 (356)
T d1goia2 1 TRKAVIGYYFIPTNQINNYTETDTSVVPFPVSNITPAKAKQLTHINFSFLDINSNLECAWDPATNDAKARDVVNRLTALK 80 (356)
T ss_dssp CCCEEEEEEECCHHHHHTCCSSCTTTCSSCGGGSCHHHHHHCSEEEEEEEEECTTSSEECCTTCCHHHHHHHHHHHHHGG
T ss_pred CCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHCCEEEEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 98579999867745767624467766776720088404752994999879977996488258765267788999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~p~lKvllSiGGW~~s~~~~~~~~~fs~~~~~~~~R~~Fi~siv~~l~~ygfDGIDIDWE~P~~~~~~~~~~l~~el~ 160 (356)
T d1goia2 81 AHNPSLRIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVNIDWEYPQAAEVDGFIAALQEIR 160 (356)
T ss_dssp GGCTTCEEEEEEECHHHHSTTSTTHHHHHHHTSSHHHHHHHHHHHHHHHHHHTCSEEEEECSCCCHHHHHHHHHHHHHHH
T ss_pred HHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHH
T ss_conf 87889869999837767788765543067885899999999999999999829982446420135444455336899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~ls~a~~~~~~~~~~~~~d~~~l~~~vD~invMtYD~~g~w~~~tg~~spLy~~~~~p~~~~~ 240 (356)
T d1goia2 161 TLLNQQTITDGRQALPYQLTIAGAGGAFFLSRYYSKLAQIVAPLDYINLMTYDLAGPWEKVTNHQAALFGDAAGPTFYNA 240 (356)
T ss_dssp HHHHHHHHHTTCTTSCCEEEEEEESSHHHHTTTGGGHHHHHTTCSEEEEECCCSSCTTSSSCCCTTCSSBCTTSCCBCCG
T ss_pred HHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCC
T ss_conf 98778888746545543058840577777752104799863215746787302367888887887745477889733212
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~vsydd~~Si~~K~~y~~~~~LgGv~iW~l~~Dd~ 320 (356)
T d1goia2 241 LREANLGWSWEELTRAFPSPFSLTVDAAVQQHLMMEGVPSAKIVMGVPFDDAESFKYKAKYIKQQQLGGVMFWHLGQDNR 320 (356)
T ss_dssp GGGSSCCCCHHHHHHHCCSSBCCCHHHHHHHHHTSTTCCGGGEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECGGGSCT
T ss_pred CCCCCCCCCHHHCCCCCCCCCCEECCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCC
T ss_conf 55444566765456566887522225899977986599843405882149999999999999957998999981488899
Q ss_pred -----------------------------------E
Q ss_conf -----------------------------------8
Q 002647 518 -----------------------------------G 518 (897)
Q Consensus 518 -----------------------------------a 518 (897)
+
T Consensus 321 ~gsLl~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (356)
T d1goia2 321 NGDLLAALDRYFNAADYDDSQLDMGTGLRYTGVGPG 356 (356)
T ss_dssp TCHHHHHHHHHHHCTTCCCTTCCCCSCBCCCCCCTT
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCC
T ss_conf 967999987762687899653506788154178999
|
| >d3bu7a1 b.82.1.23 (A:19-373) Gentisate 1,2-dioxygenase {Silicibacter pomeroyi [TaxId: 89184]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: RmlC-like cupins family: Gentisate 1,2-dioxygenase-like domain: Gentisate 1,2-dioxygenase species: Silicibacter pomeroyi [TaxId: 89184]
Probab=100.00 E-value=0 Score=26728.87 Aligned_cols=1 Identities=100% Similarity=1.733 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~plw~~~~~~~p~~p~~~~~p~~w~~~~~~~~l~~~~~~~~~~~~~rr~~~l~np~~~~~~~ 80 (355)
T d3bu7a1 1 RDTPELEAYYDDLAKIETGALWTVANDIEPWEPTPKSAPVHWKWSDLRREVLRAIDLVRPEDAGRRVVYLRNPQRKDVSA 80 (355)
T ss_dssp CCCHHHHHHHHHHHHTTCCCGGGSCGGGSCSSCCCSSCCCEECHHHHHHHHHHHHHHSCSSCSSCCCEECCCGGGGGGTC
T ss_pred CCCHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCHHHCCEEEEEEECCCCCCCCC
T ss_conf 98578999999998768945110046778999998862216009999999998741168311770599960798778777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~t~~l~~~~q~l~PGe~~~~HrH~~~~~~~vi~G~g~~t~v~ge~~~~~~GD~~~~P~~~~H~h~n~~~~~~~~~l~~~D 160 (355)
T d3bu7a1 81 ACGWLFSGIQTMKAGERAGAHRHAASALRFIMEGSGAYTIVDGHKVELGANDFVLTPNGTWHEHGILESGTECIWQDGLD 160 (355)
T ss_dssp SBTTBEEEEEEECTTCBCCCEEESSCEEEEEEECSCEEEEETTEEEEECTTCEEEECTTCCEEEEECTTCCCEEEEEEEC
T ss_pred CCCHHHHHEEEECCCCCCCCCCCCCCEEEEEEECCCEEEEECCEEEEEECCCEEEECCCCEEEEECCCCCCCEEEEEECC
T ss_conf 67204532076689983730115442048999898079989998877667999995899528622478997489998125
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~Pl~~~l~~~f~e~~p~~~~~~~~~~~~s~~~~~~~~~~p~~~~~~~~~sp~~~ypw~~~~~al~~~~~~~~~~~~~g~~ 240 (355)
T d3bu7a1 161 IPLTNCLEANFYEVHPNDYQTTDIPLNDSPLTYGGPALLPQLDKWDKPYSPLLKYSWEPTYEALLNYAKASDGSPYDGLI 240 (355)
T ss_dssp HHHHHHTTCCCEEECTTSSCCCCCCTTHHHHHHCSTTEEESSCCCCCSSCSCCEECHHHHHHHHHHHHTTCCCBTTTBEE
T ss_pred HHHHHHCCCEECCCCCHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEE
T ss_conf 67876326300125840014555787602455344565443456776668533366442167789898547888778559
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 l~y~nP~tg~~~~~ti~~~~~~l~pG~~~~~hrH~~~~v~~v~~G~g~~~i~g~~~~~~~GDv~~vP~~~~h~~~N~s~~ 320 (355)
T d3bu7a1 241 LRYTNPQTGGHPMLTMGASMQMLRPGEHTKAHRHTGNVIYNVAKGQGYSIVGGKRFDWSEHDIFCVPAWTWHEHCNTQER 320 (355)
T ss_dssp EEECCTTTSSCSSSSCEEEEEEECTTCBCCCEEESSCEEEEEEECCEEEEETTEEEEECTTCEEEECTTCCEEEEECCSS
T ss_pred EEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCEEEEECCEEEEEECCCEEEECCCCCEEEECCCCC
T ss_conf 99646655577752016789997899705883735707999997849999999998862899899499984785558998
Q ss_pred ----------------------------------E
Q ss_conf ----------------------------------8
Q 002647 518 ----------------------------------G 518 (897)
Q Consensus 518 ----------------------------------a 518 (897)
+
T Consensus 321 e~~~Lf~~~D~P~~~~Lg~~~e~~~~~~~~~q~~~ 355 (355)
T d3bu7a1 321 DDACLFSFNDFPVMEKLGFWAEQALEDNGGHQIVA 355 (355)
T ss_dssp CCEEEEEEESHHHHHHTTCCCEEECCSTTTCCCCC
T ss_pred CCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 86899995475999876167775411047976569
|
| >d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Cystathionine beta-synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=26724.02 Aligned_cols=1 Identities=0% Similarity=-1.986 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~i~~~IG~TPLv~l~~ls~~~G~~~~i~~K~E~~nptGSfKdRg 80 (355)
T d1jbqa_ 1 WIRPDAPSRCTWQLGRPASESPHHHTAPAKSPKILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRI 80 (355)
T ss_dssp CCCTTSCCCCCCCTTSCGGGCCSCCCCCCCCCSEESSGGGGSSCCCEEECCSHHHHTTCCSEEEEEEGGGSTTSBTHHHH
T ss_pred CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEECCCHHHHHCCCCEEEEEECCCCCCCCHHHHH
T ss_conf 98899998865548986888997666776556410318775489973788643277599977999977889755979999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 a~~~i~~a~~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~ 160 (355)
T d1jbqa_ 81 SLRMIEDAERDGTLKPGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPES 160 (355)
T ss_dssp HHHHHHHHHHHTCSCTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CC
T ss_pred HHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCEEEEECCCCCCHHHHH
T ss_conf 99999999972886667669972555400488999986257708996123168899999844976999216643101555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~kii~vep 240 (355)
T d1jbqa_ 161 HVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDP 240 (355)
T ss_dssp HHHHHHHHHHHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 34699999973356513444576532001005650034441389998568622587037788888752487536986325
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~gs~~~~~~~~~~~~~~~~~i~gi~~~~~~~~~~~~~~~~~~~v~D~ea~~~~~~L~~~eGi~vepSsaa~laa~l~~~~ 320 (355)
T d1jbqa_ 241 EGSILAEPEELNQTEQTTYEVEGIGYDFIPTVLDRTVVDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVKAAQ 320 (355)
T ss_dssp TTCSCSSSGGGGCCSCCCCSCCSCCCSSCCTTCCGGGCCEEEEECHHHHHHHHHHHHHHSCCCBCHHHHHHHHHHHHHGG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHH
T ss_conf 67720133333322334522355456620111100120220358989999999999998095982899999999999977
Q ss_pred ----------------------------------E
Q ss_conf ----------------------------------8
Q 002647 518 ----------------------------------G 518 (897)
Q Consensus 518 ----------------------------------a 518 (897)
-
T Consensus 321 ~~~~g~~VVvvlcd~G~kY~s~~~~d~~~~~~~~~ 355 (355)
T d1jbqa_ 321 ELQEGQRCVVILPDSVRNYMTKFLSDRWMLQKGFL 355 (355)
T ss_dssp GCCTTCEEEEEECBBGGGGTTTTTCHHHHHHTTCC
T ss_pred HCCCCCEEEEEECCCCCCCCCCCCCHHHHHHCCCC
T ss_conf 60896989999777976235642689999877899
|
| >d1luca_ c.1.16.1 (A:) Bacterial luciferase alpha chain, LuxA {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Bacterial luciferase-like family: Bacterial luciferase (alkanal monooxygenase) domain: Bacterial luciferase alpha chain, LuxA species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=0 Score=26723.92 Aligned_cols=1 Identities=0% Similarity=-0.892 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 M~fg~f~~~~~~~~~~~~~~~~~~~~~a~~ae~~Gf~~~~~~ehh~~~~~~~~~p~~~~a~~a~~T~~I~lgt~v~~~~~ 80 (355)
T d1luca_ 1 MKFGNFLLTYQPPELSQTEVMKRLVNLGKASEGCGFDTVWLLEHHFTEFGLLGNPYVAAAHLLGATETLNVGTAAIVLPT 80 (355)
T ss_dssp CEEEEEECCCCCTTCCHHHHHHHHHHHHHHTGGGTCSEEEECCCCSBTTBCCSCHHHHHHHHHHHCSSCEEEEEEEEGGG
T ss_pred CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCC
T ss_conf 91357668879999799999999999999999879989996235788877767999999999996791068542367887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~P~~~A~~~atLd~ls~GR~~lGig~G~~~~~~~~~G~~~~~~~~~~~E~~~il~~l~~~~~~~~~G~~~~~~~~~~~P 160 (355)
T d1luca_ 81 AHPVRQAEDVNLLDQMSKGRFRFGICRGLYDKDFRVFGTDMDNSRALMDCWYDLMKEGFNEGYIAADNEHIKFPKIQLNP 160 (355)
T ss_dssp SCHHHHHHHHHHHHHHHTSCEEEEEECCCCHHHHHHHTCCGGGHHHHHHHHHHHHHHHHHHSEEEEESSSCEEEEEECSS
T ss_pred CHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 65999999998887626997146542034300343210121001101578888887520243322222344444322366
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~p~q~~~~Pi~~a~~sp~~~~~Aa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gr~~~~~~~~~~~~~~v~~~~e~A~ 240 (355)
T d1luca_ 161 SAYTQGGAPVYVVAESASTTEWAAERGLPMILSWIINTHEKKAQLDLYNEVATEHGYDVTKIDHCLSYITSVDHDSNRAK 240 (355)
T ss_dssp CCSSTTSSCEEECCCSHHHHHHHHHTTCCBEECSSSCHHHHHHHHHHHHHHHHHTTCCGGGCCCEEEEECEECSSHHHHH
T ss_pred CCCCCCCCCCCHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 43567888620120322789999985067644354203331127899999887622454333210010011467799999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGtpe~v~~~l~~~~e~~Gv 320 (355)
T d1luca_ 241 DICRNFLGHWYDSYVNATKIFDDSDQTKGYDFNKGQWRDFVLKGHKDTNRRIDYSYEINPVGTPEECIAIIQQDIDATGI 320 (355)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC-----------------------------CCSGGGGGSSEESHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHCC
T ss_conf 99999999999986421013576132125421102344555403501678887427741564899999999999997599
Q ss_pred ----------------------------------E
Q ss_conf ----------------------------------8
Q 002647 518 ----------------------------------G 518 (897)
Q Consensus 518 ----------------------------------a 518 (897)
-
T Consensus 321 d~~~l~~~~~~~~~~~~~sl~lfae~V~P~lr~~~ 355 (355)
T d1luca_ 321 DNICCGFEANGSEEEIIASMKLFQSDVMPYLKEKQ 355 (355)
T ss_dssp CEEEEECGGGCSHHHHHHHHHHHHHHTGGGCCCCC
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 97999788999999999999999984101124899
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=100.00 E-value=0 Score=26723.81 Aligned_cols=1 Identities=100% Similarity=2.098 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~p~~~~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v 80 (355)
T d2bbkh_ 1 DEPRILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYV 80 (355)
T ss_dssp CCCCBCCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEE
T ss_pred CCCCEEEEECCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEECCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCEE
T ss_conf 99717476589999999982664777671999999999499999899998569948999999996777642015899989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (355)
T d2bbkh_ 81 EVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDT 160 (355)
T ss_dssp EEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTE
T ss_pred EEEECCCCCEEEEEECCCCCEEECCCCCCEEEEECCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCEEEECCCCC
T ss_conf 99999999798898058864031179873499933887157732798820454305788376677058740473069963
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 240 (355)
T d2bbkh_ 161 FFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEA 240 (355)
T ss_dssp EEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHH
T ss_pred EEEECCCCCEEEEEECCCCEEEEEECCCCCCEECCEEEECCCCCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCCCC
T ss_conf 69993899989998347873799962433300011061021538997388746998299996589907998445784412
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~~~~~~~~~a~spDG~~~l~v~~~ 320 (355)
T d2bbkh_ 241 ERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALST 320 (355)
T ss_dssp HHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEET
T ss_pred EEEEEEECCCEEEEEEECCCCEEEEEECCCCCEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEEEC
T ss_conf 68543303510899980799767887406871265179975999867888498996689987799992899969999978
Q ss_pred ----------------------------------E
Q ss_conf ----------------------------------8
Q 002647 518 ----------------------------------G 518 (897)
Q Consensus 518 ----------------------------------a 518 (897)
|
T Consensus 321 ~d~~i~v~D~~tg~~~~~i~~~G~~p~~i~~~d~~ 355 (355)
T d2bbkh_ 321 GDKTLYIHDAESGEELRSVNQLGHGPQVITTADMG 355 (355)
T ss_dssp TTTEEEEEETTTCCEEEEECCCCSSCCEEECCCCC
T ss_pred CCCEEEEEECCCCCEEEEEECCCCCCCEEEECCCC
T ss_conf 99989999999998999992869796589969999
|
| >d1fuia2 c.85.1.1 (A:1-355) L-fucose isomerase, N-terminal and second domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FucI/AraA N-terminal and middle domains superfamily: FucI/AraA N-terminal and middle domains family: L-fucose isomerase, N-terminal and second domains domain: L-fucose isomerase, N-terminal and second domains species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=26726.19 Aligned_cols=1 Identities=0% Similarity=-0.925 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~pkiGirp~~Dgr~~~~re~le~~t~~~ak~~a~~l~~~l~~~~g~~ve~V~~d~~i~~~~eA~~~aekf~~~~v 80 (355)
T d1fuia2 1 MKKISLPKIGIRPVIDGRRMGVRESLEEQTMNMAKATAALLTEKLRHACGAAVECVISDTCIAGMAEAAACEEKFSSQNV 80 (355)
T ss_dssp CCSCSCCEEEEEEBCCCCTTTHHHHHHHHHHHHHHHHHHHHHHHCBCTTSCBCCEEECSSCBCSHHHHHHHHHHHHTTTE
T ss_pred CCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 98678980677853356504432038999999999999999987412689976999467516886999999999866598
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 d~~i~v~p~w~~~~~~~~~~~~~p~~vw~fn~~erpG~vgl~a~~aa~~q~Gip~~~iyg~~vqd~~d~~~p~dv~ekll 160 (355)
T d1fuia2 81 GLTITVTPCWCYGSETIDMDPTRPKAIWGFNGTERPGAVYLAAALAAHSQKGIPAFSIYGHDVQDADDTSIPADVEEKLL 160 (355)
T ss_dssp EEEEEEESSCCCHHHHSCCCSSSCEEEEECBCSSSBHHHHHHHHHHHHHHTTCCCEEEECSSCCCTTCCCCCHHHHHHHH
T ss_pred CEEEEEECCCCCHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHH
T ss_conf 77999825546615545314799866882689999868999999999986598734760776668754226699999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~faRAa~av~~Lrg~~ig~iG~~~mGm~~~~~d~~~l~~~fGi~ve~iDm~El~rr~e~~i~D~eEv~~Al~w~k~~~~~ 240 (355)
T d1fuia2 161 RFARAGLAVASMKGKSYLSLGGVSMGIAGSIVDHNFFESWLGMKVQAVDMTELRRRIDQKIYDEAELEMALAWADKNFRY 240 (355)
T ss_dssp HHHHHHHHHHHHTTCEEEEESSCSTTCGGGSCCHHHHHHHHCCEEEEECTHHHHHHHHTTCSCHHHHHHHHHHHHHHCEE
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 99999999998658927887785677441257999999983995278759999999974689999999999999973302
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 g~d~n~~~~~~~~~~~~e~~e~~vkm~~~~rdlm~~n~~l~~~~~~ee~~g~~aia~gfqgqr~wtd~~p~~d~~ea~LN 320 (355)
T d1fuia2 241 GEDENNKQYQRNAEQSRAVLRESLLMAMCIRDMMQGNSKLADIGRVEESLGYNAIAAGFQGQRHWTDQYPNGDTAEAILN 320 (355)
T ss_dssp CCCCSCGGGCCCHHHHHHHHHHHHHHHHHHHHHHHCCTHHHHTTCHHHHTCCCEEEEEECCTTTTTTTSCCSHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHCCCCCEEEEECCCCHHHCCCCCCHHHHHHHC
T ss_conf 41357512477776759899999999999999985081034414157656888425531245202103655107899857
Q ss_pred ----------------------------------E
Q ss_conf ----------------------------------8
Q 002647 518 ----------------------------------G 518 (897)
Q Consensus 518 ----------------------------------a 518 (897)
-
T Consensus 321 s~~dwnG~rep~~~AtE~D~~~altMl~~~lLTgt 355 (355)
T d1fuia2 321 SSFDWNGVREPFVVATENDSLNGVAMLMGHQLTGT 355 (355)
T ss_dssp SSEETTEECCCCCEEETTCHHHHHHHHHHHHHHCS
T ss_pred CCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCC
T ss_conf 84444787686336633340108999999875089
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=26722.61 Aligned_cols=1 Identities=0% Similarity=0.238 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~~~~~~~~~~~f~i~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~ 80 (355)
T d2b1pa1 1 NQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 80 (355)
T ss_dssp CCEEEEEETTEEEEEETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCEEEEECCCCEEECCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCHHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 99879995894045337759988962175859999999999989999998823369799999999999998648987648
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl 160 (355)
T d2b1pa1 81 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 160 (355)
T ss_dssp CSEEECSCCSTTTCCEEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEE
T ss_pred EEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 99897025643457626999841446778765038999999999999999998865221124567763211365443132
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~ 240 (355)
T d2b1pa1 161 LDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 240 (355)
T ss_dssp CCCCC---------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHH
T ss_pred ECHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHH
T ss_conf 01023211466655332214655558133147777877433356625789865989988897788999999720589879
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~~~~ 320 (355)
T d2b1pa1 241 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDP 320 (355)
T ss_dssp HHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGCCH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCCCCCCCCCC
T ss_conf 99876566777764175435666421264333543210133379999999999876994579089999669420878881
Q ss_pred ----------------------------------E
Q ss_conf ----------------------------------8
Q 002647 518 ----------------------------------G 518 (897)
Q Consensus 518 ----------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (355)
T d2b1pa1 321 AEVEAPPPQIYDKQLDEREHTIEEWKELIYKEVMN 355 (355)
T ss_dssp HHHTCCCC-------CCCCCCHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCC
T ss_conf 00458999877702332415999999999998629
|
| >d1pcla_ b.80.1.1 (A:) Pectate lyase {Erwinia chrysanthemi, type E [TaxId: 556]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Single-stranded right-handed beta-helix superfamily: Pectin lyase-like family: Pectate lyase-like domain: Pectate lyase species: Erwinia chrysanthemi, type E [TaxId: 556]
Probab=100.00 E-value=0 Score=26720.30 Aligned_cols=1 Identities=0% Similarity=-1.656 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
.
T Consensus 1 ~~~~~~a~~G~a~~~g~~t~GG~gg~v~~Vt~l~dL~~al~~~~~~~~vi~v~G~I~~~~~~~~~~~~~~~~~~~i~v~s 80 (355)
T d1pcla_ 1 AVETDAATTGWATQNGGTTGGAKAAKAVEVKNISDFKKALNGTDSSAKIIKVTGPIDISGGKAYTSFDDQKARSQISIPS 80 (355)
T ss_pred CCCCCCCCCCEECCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCEEEEEECEEEECCCCCCEECCCCCCCCCEEECCC
T ss_conf 95456788741512798775789963999289999999873769942999987399767762010033212230376079
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 n~TI~G~G~~~~i~g~gl~i~~a~NVIirnl~ir~~~~~~~~~~~g~~~~~~~D~i~~~~~~~vwIDHcs~s~~~d~~~~ 160 (355)
T d1pcla_ 81 NTTIIGVGSNGKFTNGSLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVIDNSTNVWVDHVTISDGSFTDDK 160 (355)
T ss_pred CCEEEECCCCEEEECCEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCCCCC
T ss_conf 97698535753995578999736548997348625756687546687767667638842885089977552467656544
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~~~~~~~~~~dg~~d~~~~s~~vTiS~~~~~~~~~~~l~G~~~~~~~~~~~~~~vT~hhNl~~~~~~R~P~~r~G~~h 240 (355)
T d1pcla_ 161 YTTKDGEKYVQHDGALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNVFDRVTERAPRVRFGSIH 240 (355)
T ss_pred CCCCCCCCCCCCCCEEEECCCEEEEEEEEEECCCCCCCEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEE
T ss_conf 33435653103561466024601489842123775420133677788655677615889534435776659851255798
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 v~NN~~~n~~~~~~~~~~y~~~~~~~~~v~~e~NyF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 320 (355)
T d1pcla_ 241 AYNNVYLGDVKHSVYPYLYSFGLGTSGSILSESNSFTLSNLKSIDGKNPECSIVKQFNSKVFSDKGSLVNGSTTTKLDTC 320 (355)
T ss_pred EECCEEECCCCCCCCCCEEEECCCCCCEEEEECCEEECCCCCCCCCCCCCCCCEECCCCCEEECCCCCCCCCCCCCCCCC
T ss_conf 98848888777534420055136767469986978878998654225777550440588577457533068623435776
Q ss_pred ----------------------------------E
Q ss_conf ----------------------------------8
Q 002647 518 ----------------------------------G 518 (897)
Q Consensus 518 ----------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~~~~p~~~~~~~~a~~v~~~V~~~AGAGkl 355 (355)
T d1pcla_ 321 GLTAYKPTLPYKYSAQTMTSSLATSINNNAGYGKL 355 (355)
T ss_pred CCCCCCCCCCCCCEECCHHHHHHHHHHHCCCCCCC
T ss_conf 55312457875242128578777877626788859
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=26720.92 Aligned_cols=1 Identities=0% Similarity=-0.925 Sum_probs=0.0
Q ss_pred E-------------------------------------------------------------------------------
Q ss_conf 9-------------------------------------------------------------------------------
Q 002647 517 R------------------------------------------------------------------------------- 517 (897)
Q Consensus 517 k------------------------------------------------------------------------------- 517 (897)
-
T Consensus 1 ~~p~~~tL~GH~~~vitc~~~~~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~~~l~s~s~D~~i~iw~ 80 (355)
T d1nexb2 1 FVPQRTTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWD 80 (355)
T ss_dssp CCCEEEEEECCSSSCEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEETTTEEEEEETTCCEEEEE
T ss_pred CCCCCEEECCCCCCCEEEEEECCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCCC
T ss_conf 98875888983788699999889999999189909999899993999997899988999986999999996452443211
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (355)
T d1nexb2 81 IKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGH 160 (355)
T ss_dssp TTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCEECCCCCCCEECCCEECCCCCCCEEEEEEEC
T ss_conf 11111111110011111111111112322045543888689998567730012465200010000011234012101100
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 161 ~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~ 240 (355)
T d1nexb2 161 MASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQ 240 (355)
T ss_dssp SSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred CCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCC
T ss_conf 22210000256334421144204443013110001100012332111111210021012456368763012211111111
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 002647 518 -------------------------------------------------------------------------------- 517 (897)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (897)
T Consensus 241 ~h~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~d~~i~vwd~~tg~~~~~~~ 320 (355)
T d1nexb2 241 GHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANI 320 (355)
T ss_dssp CCSSCCCEEEECSSEEEEECTTSEEEEEETTTCCEEEEEECTTCCCCCEEEECSSEEEEEETTEEEEEETTTCCBCCSCT
T ss_pred CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCCEEEEEECCEEEEEECCCCCEEEEEE
T ss_conf 11111111123210033320111111111111110001246882299998499989999809979999999997988884
Q ss_pred ----------------------------------E
Q ss_conf ----------------------------------8
Q 002647 518 ----------------------------------G 518 (897)
Q Consensus 518 ----------------------------------a 518 (897)
-
T Consensus 321 ~~~~~~V~~v~~~~~~~~~~~s~dg~~~l~~~dfs 355 (355)
T d1nexb2 321 LKDADQIWSVNFKGKTLVAAVEKDGQSFLEILDFS 355 (355)
T ss_dssp TTTCSEEEEEEEETTEEEEEEESSSCEEEEEEECC
T ss_pred CCCCCCEEEEEECCCEEEEEEECCCCEEEEEEECC
T ss_conf 58999899999839919999989890999999588
|