BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002649
(896 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2IUJ|A Chain A, Crystal Structure Of Soybean Lipoxygenase-B
Length = 853
Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/865 (43%), Positives = 529/865 (61%), Gaps = 33/865 (3%)
Query: 50 FSPSINSIKAIFNLTAEKSTKVKAVITVKPIVSDPL--------AVEKLIGTLVLELVSA 101
F IK + + + ++ +V IV L V L ++ ++L+SA
Sbjct: 4 FGHKGQKIKGTMVVMQKNVLDINSITSVDGIVGTGLDFLGSALDTVTFLASSISIQLISA 63
Query: 102 -ELDPETGKEKPTIKSRAHRSLFTDDDGNLKYKTEFDVPSNFGEVGAILVEADQLTETFL 160
+ D GK R +L T Y +FD S+FG GA ++ E +L
Sbjct: 64 TKADGGKGKVGKATNLRGKITLPTIGAKEEAYDAQFDWDSDFGIPGAFYIKNYMQNEFYL 123
Query: 161 KDIALDGLRN-GPVNIACDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLARLRAEELNNL 219
K + L+ + N G ++ C+SW+ K RIFF N +YLPS+TP L + R EEL N+
Sbjct: 124 KSLILEDIPNHGTIHFICNSWVYNSKHYKTDRIFFANNTYLPSETPAPLVKYREEELKNV 183
Query: 220 QGDGQGERKIHERIYDYDVYNDLGMPDSILKSDLVRPVLGGKEHPYPRRCRTGHPKSSKD 279
+GDG GERK +RIYDYDVYNDLG PD K RPVLGG PYPRR RTG K+ KD
Sbjct: 184 RGDGTGERKEWDRIYDYDVYNDLGDPDKGEK--YARPVLGGSALPYPRRGRTGRGKTRKD 241
Query: 280 PASESWSLSVYVPRDEAFSLLKTAQFSATGVYSALHAVIP-----FVESILRIGKDKGFP 334
P SE VY+PRDEAF LK++ F A G+ S V+P F ++L + F
Sbjct: 242 PNSEKPGDFVYLPRDEAFGHLKSSDFLAYGIKSVAQDVLPVLTDAFDGNLLSLD----FD 297
Query: 335 SLEAIDKLFNEGVELPPEIEKLPSWLKILPNFFKSIANTGKDILRFETPETLKRDKLFWL 394
+ + KL+ GV LP + + I+ F++ G+ L++ P+ ++ DK W+
Sbjct: 298 NFAEVRKLYEGGVTLPTNFLSNITPIPIIKELFRT---DGEQFLKYPPPKVMQVDKSAWM 354
Query: 395 RDEEFGRETLAGLNPYGISLVADWPLKSTLDPETYGPTESAITKELIEKEIGGSMTVEEA 454
DEEF RET+AGLNP I ++ ++PL S LD + YG ITKE +E +GG +TVE+A
Sbjct: 355 TDEEFARETIAGLNPNVIKIIEEFPLSSKLDTQAYGDHTCIITKEHLEPNLGG-LTVEQA 413
Query: 455 IKQKKLFIIDYHDALLPYVEKVRQIKDTTLYGSRTVFFLNPDGTLRPLAIELTRPPMDGK 514
I+ KKLFI+D+HD L+PY+ K+ T Y +RT+FFL DGTL PLAIEL++P G+
Sbjct: 414 IQNKKLFILDHHDYLIPYLRKINA-NTTKTYATRTIFFLKNDGTLTPLAIELSKPHPQGE 472
Query: 515 PQW--KQVFTPSTGNSTESWLWRLAKAHVLAHDSGYHQLISHWLRTHCCVEPYVIATNRR 572
+V+ PS+ E+++W LAKA+V+ +D+ YHQ+ISHWL TH VEP+VIATNR
Sbjct: 473 EYGPVSEVYVPSS-EGVEAYIWLLAKAYVVVNDACYHQIISHWLNTHAVVEPFVIATNRH 531
Query: 573 LSAMHPINRLLKPHFRYTMEINALARKVLINADGIFETNFFPGKYCMEFSSVIYDKHWRF 632
LS +HPI +LL PH+R TM IN+LARK L+NADGI E F G+Y +E S+VIY K W F
Sbjct: 532 LSVVHPIYKLLFPHYRDTMNINSLARKSLVNADGIIEKTFLWGRYSLEMSAVIY-KDWVF 590
Query: 633 DNEGLPKDLIRRGIAVEDPKAPHGLKLNIEDYPYANDGLDLWDALKQWVTNYVNHYYPDP 692
++ LP DL++RG+AV+DP APHG++L IEDYPYA+DGL++WDA+K WV YV+ YY
Sbjct: 591 TDQALPNDLVKRGVAVKDPSAPHGVRLLIEDYPYASDGLEIWDAIKSWVEEYVSFYYKSD 650
Query: 693 SLVESDEELQAWWTEIRTVGHAEKKDEPWWPVLKTPQDLIEIITTIAWVASGHHAAVNFG 752
++ D ELQAWW E+ VGH + KD+PWW ++T ++L+E T+ W+AS HAAVNFG
Sbjct: 651 EELQKDPELQAWWKELVEVGHGDLKDKPWWQKMQTREELVEASATLIWIASALHAAVNFG 710
Query: 753 QYLYGGYFPNRPTVARTNLPNEDQTKEEWKSFLEKPEAALLRCFPAQFQALTVMLVIDLL 812
QY YGG NRPT++R +P ++ E+ + + PE L+ + + L + +I++L
Sbjct: 711 QYPYGGLILNRPTISRRFMP--EKGSPEYDALAKNPEKEFLKTITGKKETLIDLTIIEIL 768
Query: 813 STHSPDEEYLG-KEMEPAWGDDPVIKAAFEEFNLKMQELERIIDDRNSNENLKNRTGAAI 871
S H+ DE YLG ++ W D AF+ F ++E+E+ + ++N++E L+NR G A
Sbjct: 769 SRHASDEFYLGQRDGGDYWTSDAGPLEAFKRFGKNLEEIEKKLIEKNNDETLRNRYGPAK 828
Query: 872 VPYELLKPFSEPGATGKGVPYSISI 896
+PY LL P SE G T +G+P SISI
Sbjct: 829 MPYTLLYPSSEEGLTFRGIPNSISI 853
>pdb|1IK3|A Chain A, Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydroperoxy-
9(Z),11(E)-Octadecadienoic Acid
pdb|1HU9|A Chain A, Lipoxygenase-3 (Soybean) Complex With 4-Hydroperoxy-2-
Methoxy-Phenol
pdb|1JNQ|A Chain A, Lipoxygenase-3 (Soybean) Complex With Epigallocathechin
(Egc)
pdb|1N8Q|A Chain A, Lipoxygenase In Complex With Protocatechuic Acid
pdb|1NO3|A Chain A, Refined Structure Of Soybean Lipoxygenase-3 With
4-nitrocatechol At 2.15 Angstrom Resolution
pdb|1RRH|A Chain A, Soybean Lipoxygenase (Lox-3) At Ambient Temperatures At
2.0 A Resolution
pdb|1RRL|A Chain A, Soybean Lipoxygenase (Lox-3) At 93k At 2.0 A Resolution
pdb|1RRL|B Chain B, Soybean Lipoxygenase (Lox-3) At 93k At 2.0 A Resolution
pdb|1LNH|A Chain A, Lipoxygenase-3(Soybean) Non-Heme Fe(Ii) Metalloprotein
Length = 857
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/859 (43%), Positives = 519/859 (60%), Gaps = 28/859 (3%)
Query: 55 NSIKAIFNLTAEKSTKVKAVITVKPIVSDPL--------AVEKLIG-TLVLELVSAELDP 105
+ IK L + V +V +V I+ L + +G ++ L+L+SA
Sbjct: 10 HKIKGTVVLMRKNVLDVNSVTSVGGIIGQGLDLVGSTLDTLTAFLGRSVSLQLISATKAD 69
Query: 106 ETGKEK---PTIKSRAHRSLFTDDDGNLKYKTEFDVPSNFGEVGAILVEADQLTETFLKD 162
GK K T SL T G +K F+ G GA ++ TE FL
Sbjct: 70 ANGKGKLGKATFLEGIITSLPTLGAGQSAFKINFEWDDGSGIPGAFYIKNFMQTEFFLVS 129
Query: 163 IALDGLRN-GPVNIACDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLARLRAEELNNLQG 221
+ L+ + N G ++ C+SWI + K RIFF N++YLPS+TP L + R EEL+NL+G
Sbjct: 130 LTLEDIPNHGSIHFVCNSWIYNAKLFKSDRIFFANQTYLPSETPAPLVKYREEELHNLRG 189
Query: 222 DGQGERKIHERIYDYDVYNDLGMPDSILKSDLVRPVLGGKE-HPYPRRCRTGHPKSSKDP 280
DG GERK ERIYDYDVYNDLG PD + RPVLGG + PYPRR RTG + KDP
Sbjct: 190 DGTGERKEWERIYDYDVYNDLGDPDK--GENHARPVLGGNDTFPYPRRGRTGRKPTRKDP 247
Query: 281 ASESWSLSVYVPRDEAFSLLKTAQFSATGVYSALHAVIPFVESILRIG-KDKGFPSLEAI 339
SES S VY+PRDEAF LK++ F G+ S V+P ++S + + F S + +
Sbjct: 248 NSESRSNDVYLPRDEAFGHLKSSDFLTYGLKSVSQNVLPLLQSAFDLNFTPREFDSFDEV 307
Query: 340 DKLFNEGVELPPEIEKLPSWLKILPNFFKSIANTGKDILRFETPETLKRDKLFWLRDEEF 399
L++ G++LP +I S L +L F++ G+ L+F P+ ++ K W+ DEEF
Sbjct: 308 HGLYSGGIKLPTDIISKISPLPVLKEIFRT---DGEQALKFPPPKVIQVSKSAWMTDEEF 364
Query: 400 GRETLAGLNPYGISLVADWPLKSTLDPETYGPTESAITKELIEKEIGGSMTVEEAIKQKK 459
RE LAG+NP I + D+P +S LD + YG S ITKE +E + G +TV+EAI+ K+
Sbjct: 365 AREMLAGVNPNLIRCLKDFPPRSKLDSQVYGDHTSQITKEHLEPNLEG-LTVDEAIQNKR 423
Query: 460 LFIIDYHDALLPYVEKVRQIKDTTLYGSRTVFFLNPDGTLRPLAIELT--RPPMDGKPQW 517
LF++D+HD ++PY+ ++ T Y +RT+ FL DGTLRPLAIEL+ P D +
Sbjct: 424 LFLLDHHDPIMPYLRRINATS-TKAYATRTILFLKNDGTLRPLAIELSLPHPQGDQSGAF 482
Query: 518 KQVFTPSTGNSTESWLWRLAKAHVLAHDSGYHQLISHWLRTHCCVEPYVIATNRRLSAMH 577
QVF P+ ES +W LAKA+V+ +DS YHQL+SHWL TH VEP++IATNR LS +H
Sbjct: 483 SQVFLPAD-EGVESSIWLLAKAYVVVNDSCYHQLVSHWLNTHAVVEPFIIATNRHLSVVH 541
Query: 578 PINRLLKPHFRYTMEINALARKVLINADGIFETNFFPGKYCMEFSSVIYDKHWRFDNEGL 637
PI +LL PH+R TM IN LAR L+N G+ E F G+Y +E S+V+Y K W F ++ L
Sbjct: 542 PIYKLLHPHYRDTMNINGLARLSLVNDGGVIEQTFLWGRYSVEMSAVVY-KDWVFTDQAL 600
Query: 638 PKDLIRRGIAVEDPKAPHGLKLNIEDYPYANDGLDLWDALKQWVTNYVNHYYPDPSLVES 697
P DLI+RG+A+EDP PHG++L IEDYPY DGL++WDA+K WV YV YY +
Sbjct: 601 PADLIKRGMAIEDPSCPHGIRLVIEDYPYTVDGLEIWDAIKTWVHEYVFLYYKSDDTLRE 660
Query: 698 DEELQAWWTEIRTVGHAEKKDEPWWPVLKTPQDLIEIITTIAWVASGHHAAVNFGQYLYG 757
D ELQA W E+ VGH +KK+EPWWP ++T ++L+E I W AS HAAVNFGQY YG
Sbjct: 661 DPELQACWKELVEVGHGDKKNEPWWPKMQTREELVEACAIIIWTASALHAAVNFGQYPYG 720
Query: 758 GYFPNRPTVARTNLPNEDQTKEEWKSFLEKPEAALLRCFPAQFQALTVMLVIDLLSTHSP 817
G NRPT++R +P ++ E++ + P+ A L+ +FQ L + VI++LS H+
Sbjct: 721 GLILNRPTLSRRFMP--EKGSAEYEELRKNPQKAYLKTITPKFQTLIDLSVIEILSRHAS 778
Query: 818 DEEYLGKEMEPAWGDDPVIKAAFEEFNLKMQELERIIDDRNSNENLKNRTGAAIVPYELL 877
DE YLG+ P W D AF+ F K+ ++E + +RN++E L+NR G +PY LL
Sbjct: 779 DEVYLGERDNPNWTSDTRALEAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLL 838
Query: 878 KPFSEPGATGKGVPYSISI 896
P S+ G T +G+P SISI
Sbjct: 839 LPSSKEGLTFRGIPNSISI 857
>pdb|1ROV|A Chain A, Lipoxygenase-3 Treated With Cumene Hydroperoxide
Length = 857
Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/859 (43%), Positives = 516/859 (60%), Gaps = 28/859 (3%)
Query: 55 NSIKAIFNLTAEKSTKVKAVITVKPIVSDPL-AVEKLIGTLV--------LELVSAELDP 105
+ IK L + V +V +V I+ L V + TL L+L+SA
Sbjct: 10 HKIKGTVVLMRKNVLDVNSVTSVGGIIGQGLDLVGSTLDTLTAFLGRSVSLQLISATKAD 69
Query: 106 ETGKEK---PTIKSRAHRSLFTDDDGNLKYKTEFDVPSNFGEVGAILVEADQLTETFLKD 162
GK K T SL T G +K F+ G GA ++ TE FL
Sbjct: 70 ANGKGKLGKATFLEGIITSLPTLGAGQSAFKINFEWDDGSGIPGAFYIKNFMQTEFFLVS 129
Query: 163 IALDGLRN-GPVNIACDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLARLRAEELNNLQG 221
+ L+ + N G ++ C+SWI + K RIFF N++YLPS+TP L + R EEL+NL+G
Sbjct: 130 LTLEDIPNHGSIHFVCNSWIYNAKLFKSDRIFFANQTYLPSETPAPLVKYREEELHNLRG 189
Query: 222 DGQGERKIHERIYDYDVYNDLGMPDSILKSDLVRPVLGGKE-HPYPRRCRTGHPKSSKDP 280
DG GERK ERIYDYDVYNDLG PD + RPVLGG + PYPRR RTG + KDP
Sbjct: 190 DGTGERKEWERIYDYDVYNDLGDPDK--GENHARPVLGGNDTFPYPRRGRTGRKPTRKDP 247
Query: 281 ASESWSLSVYVPRDEAFSLLKTAQFSATGVYSALHAVIPFVESILRIG-KDKGFPSLEAI 339
SES S VY+PRDEAF LK++ F G+ S V+P ++S + + F S + +
Sbjct: 248 NSESRSNDVYLPRDEAFGHLKSSDFLTYGLKSVSQNVLPLLQSAFDLNFTPREFDSFDEV 307
Query: 340 DKLFNEGVELPPEIEKLPSWLKILPNFFKSIANTGKDILRFETPETLKRDKLFWLRDEEF 399
L++ G++LP +I S L +L F++ G+ L+F P+ ++ K W+ DEEF
Sbjct: 308 HGLYSGGIKLPTDIISKISPLPVLKEIFRT---DGEQALKFPPPKVIQVSKSAWMTDEEF 364
Query: 400 GRETLAGLNPYGISLVADWPLKSTLDPETYGPTESAITKELIEKEIGGSMTVEEAIKQKK 459
RE LAG+NP I + D+P +S LD + YG S ITKE +E + G +TV+EAI+ K+
Sbjct: 365 AREMLAGVNPNLIRCLKDFPPRSKLDSQVYGDHTSQITKEHLEPNLEG-LTVDEAIQNKR 423
Query: 460 LFIIDYHDALLPYVEKVRQIKDTTLYGSRTVFFLNPDGTLRPLAIELT--RPPMDGKPQW 517
LF++D+HD ++PY+ ++ T Y +RT+ FL DGTLRPLAIEL+ P D +
Sbjct: 424 LFLLDHHDPIMPYLRRINATS-TKAYATRTILFLKNDGTLRPLAIELSLPHPQGDQSGAF 482
Query: 518 KQVFTPSTGNSTESWLWRLAKAHVLAHDSGYHQLISHWLRTHCCVEPYVIATNRRLSAMH 577
QVF P+ ES +W LAKA+V+ +DS YHQL+SH L TH VEP++IATNR LS +H
Sbjct: 483 SQVFLPAD-EGVESSIWLLAKAYVVVNDSCYHQLVSHXLNTHAVVEPFIIATNRHLSVVH 541
Query: 578 PINRLLKPHFRYTMEINALARKVLINADGIFETNFFPGKYCMEFSSVIYDKHWRFDNEGL 637
PI +LL PH+R TM IN LAR +N G+ E F G+Y +E S+V+Y K W F ++ L
Sbjct: 542 PIYKLLHPHYRDTMNINGLARLSXVNDGGVIEQTFLWGRYSVEMSAVVY-KDWVFTDQAL 600
Query: 638 PKDLIRRGIAVEDPKAPHGLKLNIEDYPYANDGLDLWDALKQWVTNYVNHYYPDPSLVES 697
P DLI+RG+A+EDP PHG++L IEDYPY DGL++WDA+K WV YV YY +
Sbjct: 601 PADLIKRGMAIEDPSCPHGIRLVIEDYPYTVDGLEIWDAIKTWVHEYVFLYYKSDDTLRE 660
Query: 698 DEELQAWWTEIRTVGHAEKKDEPWWPVLKTPQDLIEIITTIAWVASGHHAAVNFGQYLYG 757
D ELQA W E+ VGH +KK+EPWWP ++T ++L+E I W AS HAAVNFGQY YG
Sbjct: 661 DPELQACWKELVEVGHGDKKNEPWWPKMQTREELVEACAIIIWTASALHAAVNFGQYPYG 720
Query: 758 GYFPNRPTVARTNLPNEDQTKEEWKSFLEKPEAALLRCFPAQFQALTVMLVIDLLSTHSP 817
G NRPT++R +P ++ E++ + P+ A L+ +FQ L + VI++LS H+
Sbjct: 721 GLILNRPTLSRRFMP--EKGSAEYEELRKNPQKAYLKTITPKFQTLIDLSVIEILSRHAS 778
Query: 818 DEEYLGKEMEPAWGDDPVIKAAFEEFNLKMQELERIIDDRNSNENLKNRTGAAIVPYELL 877
DE YLG+ P W D AF+ F K+ ++E + +RN++E L+NR G +PY LL
Sbjct: 779 DEVYLGERDNPNWTSDTRALEAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLL 838
Query: 878 KPFSEPGATGKGVPYSISI 896
P S+ G T +G+P SISI
Sbjct: 839 LPSSKEGLTFRGIPNSISI 857
>pdb|2IUK|A Chain A, Crystal Structure Of Soybean Lipoxygenase-D
pdb|2IUK|B Chain B, Crystal Structure Of Soybean Lipoxygenase-D
Length = 864
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/768 (47%), Positives = 483/768 (62%), Gaps = 21/768 (2%)
Query: 136 FDVPSNFGEVGAILVEADQLTETFLKDIALDGLRN-GPVNIACDSWIQPKIVDKQKRIFF 194
F+ ++FG GA ++ E FL + L+ + N G + C+SW+ K+ RIFF
Sbjct: 111 FEWDASFGIPGAFYIKNFMTDEFFLVSVKLEDIPNHGTIEFVCNSWVYNFRSYKKNRIFF 170
Query: 195 TNKSYLPSQTPNGLARLRAEELNNLQGDGQGERKIHERIYDYDVYNDLGMPDSILKSDLV 254
N +YLPS TP L + R EE L+GDG G+RK +RIYDYDVYNDLG PD
Sbjct: 171 VNDTYLPSATPAPLLKYRKEEFEVLRGDGTGKRKDFDRIYDYDVYNDLGNPDG----GDP 226
Query: 255 RPVLGGKE-HPYPRRCRTGHPKSSKDPASESWSLSVYVPRDEAFSLLKTAQFSATGVYSA 313
RP+LGG +PYP R RTG ++ DP SE VYVPRDE F LK++ F G+ S
Sbjct: 227 RPILGGCSIYPYPLRVRTGRERTRTDPNSEKPG-EVYVPRDENFGHLKSSDFLTYGIKSL 285
Query: 314 LHAVIPFVESI---LRIGKDKGFPSLEAIDKLFNEGVELPPEIEKLPSWLKILPNFFKSI 370
H VIP +S LR+ + F S E + L+ G++LP +I S L L F++
Sbjct: 286 SHDVIPLFKSAIFQLRVTSSE-FESFEDVRSLYEGGIKLPTDILSQISPLPALKEIFRT- 343
Query: 371 ANTGKDILRFETPETLKRDKLFWLRDEEFGRETLAGLNPYGISLVADWPLKSTLDPETYG 430
G+++L+F P K K + DEEF RE +AG+NP I + ++P KSTLDP YG
Sbjct: 344 --DGENVLQFPPPHVAKVSKSGVMTDEEFAREVIAGVNPNVIRRLQEFPPKSTLDPTLYG 401
Query: 431 PTESAITKELIEKEIGGSMTVEEAIKQKKLFIIDYHDALLPYVEKVRQIKDTTLYGSRTV 490
S ITKE +E +GG +TVEEA+ ++LFI+DY DA +PY+ ++ + Y +RT+
Sbjct: 402 DQTSTITKEQLEINMGG-VTVEEALSTQRLFILDYQDAFIPYLTRINSLPTAKAYATRTI 460
Query: 491 FFLNPDGTLRPLAIELTRPPMDGKPQWKQ--VFTPSTGNSTESWLWRLAKAHVLAHDSGY 548
FL DGTL+PLAIEL++P DG + V P+T +S +W LAKAHV+ +DSGY
Sbjct: 461 LFLKDDGTLKPLAIELSKPHPDGDNLGPESIVVLPAT-EGVDSTIWLLAKAHVIVNDSGY 519
Query: 549 HQLISHWLRTHCCVEPYVIATNRRLSAMHPINRLLKPHFRYTMEINALARKVLINADGIF 608
HQL+SHWL TH +EP+ IATNR LS +HPI +LL PH+R T+ IN LAR+ LINADGI
Sbjct: 520 HQLVSHWLNTHAVMEPFAIATNRHLSVLHPIYKLLYPHYRDTININGLARQSLINADGII 579
Query: 609 ETNFFPGKYCMEFSSVIYDKHWRFDNEGLPKDLIRRGIAVEDPKAPHGLKLNIEDYPYAN 668
E +F PGKY +E SS +Y K+W F ++ LP DL++RG+A+EDP APHGL+L IEDYPYA
Sbjct: 580 EKSFLPGKYSIEMSSSVY-KNWVFTHQALPADLVKRGLAIEDPSAPHGLRLVIEDYPYAV 638
Query: 669 DGLDLWDALKQWVTNYVNHYYPDPSLVESDEELQAWWTEIRTVGHAEKKDEPWWPVLKTP 728
DGL++WDA+K WV YV+ YYP + V+ D ELQAWW E GH + K++PWWP +T
Sbjct: 639 DGLEIWDAIKTWVHEYVSLYYPTDAAVQQDTELQAWWKEAVEKGHGDLKEKPWWPKKQTT 698
Query: 729 QDLIEIITTIAWVASGHHAAVNFGQYLYGGYFPNRPTVARTNLPNEDQTKEEWKSFLEKP 788
+DLI+ + I W AS HAAVNFGQY YGG NRPT+AR +P E E+ ++ P
Sbjct: 699 EDLIQSCSIIVWTASALHAAVNFGQYPYGGLILNRPTLARRFIPAEGT--PEYDEMVKNP 756
Query: 789 EAALLRCFPAQFQALTVMLVIDLLSTHSPDEEYLGKEMEPAWGDDPVIKAAFEEFNLKMQ 848
+ A LR +F+ L + VI++LS H+ DE YLG+ P W D AF+ F K+
Sbjct: 757 QKAYLRTITPKFETLIDLSVIEILSRHASDEIYLGERETPNWTTDKKALEAFKRFGSKLT 816
Query: 849 ELERIIDDRNSNENLKNRTGAAIVPYELLKPFSEPGATGKGVPYSISI 896
+E I+ RNS+ +L+NRTG +PY LL SE G T KG+P SISI
Sbjct: 817 GIEGKINARNSDPSLRNRTGPVQLPYTLLHRSSEEGLTFKGIPNSISI 864
>pdb|3BNB|A Chain A, Lipoxygenase-1 (Soybean) I553l Mutant
Length = 839
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/845 (42%), Positives = 497/845 (58%), Gaps = 30/845 (3%)
Query: 70 KVKAVITVKP-----IVSDPLAVEKLIG----TLVLELVSAELDPETGKEK---PTIKSR 117
K+K + + P + D AV+ L ++ L+L+SA GK K T
Sbjct: 7 KIKGTVVLMPKNELEVNPDGSAVDNLNAFLGRSVSLQLISATKADAHGKGKVGKDTFLEG 66
Query: 118 AHRSLFTDDDGNLKYKTEFDVPSNFGEVGAILVEADQLTETFLKDIALDGLRN-GPVNIA 176
+ SL T G + F+ + G GA ++ E FLK + L+ + N G +
Sbjct: 67 INTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFV 126
Query: 177 CDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLARLRAEELNNLQGDGQGERKIHERIYDY 236
C+SW+ + K RIFF N +Y+PS+TP L R EEL +L+G+G GERK ++RIYDY
Sbjct: 127 CNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDY 186
Query: 237 DVYNDLGMPDSILKSDLVRPVLGGKE-HPYPRRCRTGHPKSSKDPASESWSLSVYVPRDE 295
DVYNDLG PD K L RPVLGG PYPRR RTG + DP +E YVPRDE
Sbjct: 187 DVYNDLGNPDKSEK--LARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDE 244
Query: 296 AFSLLKTAQFSATGVYSALHAVIPFVESILRIGKDK-GFPSLEAIDKLFNEGVELPPEIE 354
LK+ G S V P ES + F S + + L+ G++LP ++
Sbjct: 245 NLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDVI 304
Query: 355 KLPSWLKILPNFFKSIANTGKDILRFETPETLKRDKLFWLRDEEFGRETLAGLNPYGISL 414
L ++ +++ G+ IL+F P ++ + W+ DEEF RE +AG+NP I
Sbjct: 305 STIIPLPVIKELYRT---DGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRG 361
Query: 415 VADWPLKSTLDPETYGPTESAITKELIEKEIGGSMTVEEAIKQKKLFIIDYHDALLPYVE 474
+ ++P KS LDP YG S IT + ++ + T++EA+ ++LF++DYHD +PYV
Sbjct: 362 LEEFPPKSNLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVR 418
Query: 475 KVRQIKDTTLYGSRTVFFLNPDGTLRPLAIELTRPPMDG--KPQWKQVFTPSTGNSTESW 532
++ Q+ Y +RT+ FL DGTL+P+AIEL+ P G QV P+ ES
Sbjct: 419 QINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAK-EGVEST 477
Query: 533 LWRLAKAHVLAHDSGYHQLISHWLRTHCCVEPYVIATNRRLSAMHPINRLLKPHFRYTME 592
+W LAKA+V+ +DS YHQL+SHWL TH +EP+VIAT+R LS +HPI +LL PH+R M
Sbjct: 478 IWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMN 537
Query: 593 INALARKVLINADGIFETNFFPGKYCMEFSSVIYDKHWRFDNEGLPKDLIRRGIAVEDPK 652
INALAR+ LINA+GI ET F P KY +E SS +Y K+W F ++ LP DLI+RG+A++DP
Sbjct: 538 INALARQSLINANGILETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPS 596
Query: 653 APHGLKLNIEDYPYANDGLDLWDALKQWVTNYVNHYYPDPSLVESDEELQAWWTEIRTVG 712
PHG++L IEDYPYA DGL++W A+K WV YV YY V++D ELQ WW E G
Sbjct: 597 TPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKG 656
Query: 713 HAEKKDEPWWPVLKTPQDLIEIITTIAWVASGHHAAVNFGQYLYGGYFPNRPTVARTNLP 772
H + KD+PWWP L+T +DL+E+ I W+AS HAAVNFGQY YGG NRPT +R LP
Sbjct: 657 HGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLP 716
Query: 773 NEDQTKEEWKSFLEKPEAALLRCFPAQFQALTVMLVIDLLSTHSPDEEYLGKEMEPAWGD 832
++ E++ + E A LR ++ L + VI++LSTH+ DE YLG+ P W
Sbjct: 717 --EKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTS 774
Query: 833 DPVIKAAFEEFNLKMQELERIIDDRNSNENLK-NRTGAAIVPYELLKPFSEPGATGKGVP 891
D AF++F K++E+E + RN++ +L+ NR G +PY LL P SE G T +G+P
Sbjct: 775 DSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIP 834
Query: 892 YSISI 896
SISI
Sbjct: 835 NSISI 839
>pdb|3PZW|A Chain A, Soybean Lipoxygenase-1 - Re-Refinement
Length = 839
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/845 (42%), Positives = 497/845 (58%), Gaps = 30/845 (3%)
Query: 70 KVKAVITVKP-----IVSDPLAVEKLIG----TLVLELVSAELDPETGKEK---PTIKSR 117
K+K + + P + D AV+ L ++ L+L+SA GK K T
Sbjct: 7 KIKGTVVLMPKNELEVNPDGSAVDNLNAFLGRSVSLQLISATKADAHGKGKVGKDTFLEG 66
Query: 118 AHRSLFTDDDGNLKYKTEFDVPSNFGEVGAILVEADQLTETFLKDIALDGLRN-GPVNIA 176
+ SL T G + F+ + G GA ++ E FLK + L+ + N G +
Sbjct: 67 INTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFV 126
Query: 177 CDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLARLRAEELNNLQGDGQGERKIHERIYDY 236
C+SW+ + K RIFF N +Y+PS+TP L R EEL +L+G+G GERK ++RIYDY
Sbjct: 127 CNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDY 186
Query: 237 DVYNDLGMPDSILKSDLVRPVLGGKE-HPYPRRCRTGHPKSSKDPASESWSLSVYVPRDE 295
DVYNDLG PD K L RPVLGG PYPRR RTG + DP +E YVPRDE
Sbjct: 187 DVYNDLGNPDKSEK--LARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDE 244
Query: 296 AFSLLKTAQFSATGVYSALHAVIPFVESILRIGKDK-GFPSLEAIDKLFNEGVELPPEIE 354
LK+ G S V P ES + F S + + L+ G++LP ++
Sbjct: 245 NLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDVI 304
Query: 355 KLPSWLKILPNFFKSIANTGKDILRFETPETLKRDKLFWLRDEEFGRETLAGLNPYGISL 414
L ++ +++ G+ IL+F P ++ + W+ DEEF RE +AG+NP I
Sbjct: 305 STIIPLPVIKELYRT---DGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRG 361
Query: 415 VADWPLKSTLDPETYGPTESAITKELIEKEIGGSMTVEEAIKQKKLFIIDYHDALLPYVE 474
+ ++P KS LDP YG S IT + ++ + T++EA+ ++LF++DYHD +PYV
Sbjct: 362 LEEFPPKSNLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVR 418
Query: 475 KVRQIKDTTLYGSRTVFFLNPDGTLRPLAIELTRPPMDG--KPQWKQVFTPSTGNSTESW 532
++ Q+ Y +RT+ FL DGTL+P+AIEL+ P G QV P+ ES
Sbjct: 419 QINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAK-EGVEST 477
Query: 533 LWRLAKAHVLAHDSGYHQLISHWLRTHCCVEPYVIATNRRLSAMHPINRLLKPHFRYTME 592
+W LAKA+V+ +DS YHQL+SHWL TH +EP+VIAT+R LS +HPI +LL PH+R M
Sbjct: 478 IWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMN 537
Query: 593 INALARKVLINADGIFETNFFPGKYCMEFSSVIYDKHWRFDNEGLPKDLIRRGIAVEDPK 652
INALAR+ LINA+GI ET F P KY +E SS +Y K+W F ++ LP DLI+RG+A++DP
Sbjct: 538 INALARQSLINANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPS 596
Query: 653 APHGLKLNIEDYPYANDGLDLWDALKQWVTNYVNHYYPDPSLVESDEELQAWWTEIRTVG 712
PHG++L IEDYPYA DGL++W A+K WV YV YY V++D ELQ WW E G
Sbjct: 597 TPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKG 656
Query: 713 HAEKKDEPWWPVLKTPQDLIEIITTIAWVASGHHAAVNFGQYLYGGYFPNRPTVARTNLP 772
H + KD+PWWP L+T +DL+E+ I W+AS HAAVNFGQY YGG NRPT +R LP
Sbjct: 657 HGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLP 716
Query: 773 NEDQTKEEWKSFLEKPEAALLRCFPAQFQALTVMLVIDLLSTHSPDEEYLGKEMEPAWGD 832
++ E++ + E A LR ++ L + VI++LSTH+ DE YLG+ P W
Sbjct: 717 --EKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTS 774
Query: 833 DPVIKAAFEEFNLKMQELERIIDDRNSNENLK-NRTGAAIVPYELLKPFSEPGATGKGVP 891
D AF++F K++E+E + RN++ +L+ NR G +PY LL P SE G T +G+P
Sbjct: 775 DSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIP 834
Query: 892 YSISI 896
SISI
Sbjct: 835 NSISI 839
>pdb|2SBL|B Chain B, The Three-Dimensional Structure Of An Arachidonic Acid 15-
Lipoxygenase
pdb|1F8N|A Chain A, Lipoxygenase-1 (Soybean) At 100k, New Refinement
pdb|1YGE|A Chain A, Lipoxygenase-1 (Soybean) At 100k
pdb|2SBL|A Chain A, The Three-Dimensional Structure Of An Arachidonic Acid 15-
Lipoxygenase
Length = 839
Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/845 (42%), Positives = 497/845 (58%), Gaps = 30/845 (3%)
Query: 70 KVKAVITVKP-----IVSDPLAVEKLIG----TLVLELVSAELDPETGKEK---PTIKSR 117
K+K + + P + D AV+ L ++ L+L+SA GK K T
Sbjct: 7 KIKGTVVLMPKNELEVNPDGSAVDNLNAFLGRSVSLQLISATKADAHGKGKVGKDTFLEG 66
Query: 118 AHRSLFTDDDGNLKYKTEFDVPSNFGEVGAILVEADQLTETFLKDIALDGLRN-GPVNIA 176
+ SL T G + F+ + G GA ++ E FLK + L+ + N G +
Sbjct: 67 INTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFV 126
Query: 177 CDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLARLRAEELNNLQGDGQGERKIHERIYDY 236
C+SW+ + K RIFF N +Y+PS+TP L R EEL +L+G+G GERK ++RIYDY
Sbjct: 127 CNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDY 186
Query: 237 DVYNDLGMPDSILKSDLVRPVLGGKE-HPYPRRCRTGHPKSSKDPASESWSLSVYVPRDE 295
DVYNDLG PD K L RPVLGG PYPRR RTG + DP +E YVPRDE
Sbjct: 187 DVYNDLGNPDKSEK--LARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDE 244
Query: 296 AFSLLKTAQFSATGVYSALHAVIPFVESILRIGKDK-GFPSLEAIDKLFNEGVELPPEIE 354
LK+ G S V P ES + F S + + L+ G++LP ++
Sbjct: 245 NLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDVI 304
Query: 355 KLPSWLKILPNFFKSIANTGKDILRFETPETLKRDKLFWLRDEEFGRETLAGLNPYGISL 414
L ++ +++ G+ IL+F P ++ + W+ DEEF RE +AG+NP I
Sbjct: 305 STIIPLPVIKELYRT---DGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRG 361
Query: 415 VADWPLKSTLDPETYGPTESAITKELIEKEIGGSMTVEEAIKQKKLFIIDYHDALLPYVE 474
+ ++P KS LDP YG S IT + ++ + T++EA+ ++LF++DYHD +PYV
Sbjct: 362 LEEFPPKSNLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVR 418
Query: 475 KVRQIKDTTLYGSRTVFFLNPDGTLRPLAIELTRPPMDG--KPQWKQVFTPSTGNSTESW 532
++ Q+ Y +RT+ FL DGTL+P+AIEL+ P G QV P+ ES
Sbjct: 419 QINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAK-EGVEST 477
Query: 533 LWRLAKAHVLAHDSGYHQLISHWLRTHCCVEPYVIATNRRLSAMHPINRLLKPHFRYTME 592
+W LAKA+V+ +DS YHQL+SHWL TH +EP+VIAT+R LS +HPI +LL PH+R M
Sbjct: 478 IWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMN 537
Query: 593 INALARKVLINADGIFETNFFPGKYCMEFSSVIYDKHWRFDNEGLPKDLIRRGIAVEDPK 652
INALAR+ LINA+GI ET F P KY +E SS +Y K+W F ++ LP DLI+RG+A++DP
Sbjct: 538 INALARQSLINANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPS 596
Query: 653 APHGLKLNIEDYPYANDGLDLWDALKQWVTNYVNHYYPDPSLVESDEELQAWWTEIRTVG 712
PHG++L IEDYPYA DGL++W A+K WV YV YY V++D ELQ WW E G
Sbjct: 597 TPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKG 656
Query: 713 HAEKKDEPWWPVLKTPQDLIEIITTIAWVASGHHAAVNFGQYLYGGYFPNRPTVARTNLP 772
H + KD+PWWP L+T +DL+E+ I W+AS HAAVNFGQY YGG NRPT +R LP
Sbjct: 657 HGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLP 716
Query: 773 NEDQTKEEWKSFLEKPEAALLRCFPAQFQALTVMLVIDLLSTHSPDEEYLGKEMEPAWGD 832
++ E++ + E A LR ++ L + VI++LSTH+ DE YLG+ P W
Sbjct: 717 --EKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTS 774
Query: 833 DPVIKAAFEEFNLKMQELERIIDDRNSNENLK-NRTGAAIVPYELLKPFSEPGATGKGVP 891
D AF++F K++E+E + RN++ +L+ NR G +PY LL P SE G T +G+P
Sbjct: 775 DSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIP 834
Query: 892 YSISI 896
SISI
Sbjct: 835 NSISI 839
>pdb|3BND|A Chain A, Lipoxygenase-1 (Soybean), I553v Mutant
Length = 839
Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/845 (42%), Positives = 497/845 (58%), Gaps = 30/845 (3%)
Query: 70 KVKAVITVKP-----IVSDPLAVEKLIG----TLVLELVSAELDPETGKEK---PTIKSR 117
K+K + + P + D AV+ L ++ L+L+SA GK K T
Sbjct: 7 KIKGTVVLMPKNELEVNPDGSAVDNLNAFLGRSVSLQLISATKADAHGKGKVGKDTFLEG 66
Query: 118 AHRSLFTDDDGNLKYKTEFDVPSNFGEVGAILVEADQLTETFLKDIALDGLRN-GPVNIA 176
+ SL T G + F+ + G GA ++ E FLK + L+ + N G +
Sbjct: 67 INTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFV 126
Query: 177 CDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLARLRAEELNNLQGDGQGERKIHERIYDY 236
C+SW+ + K RIFF N +Y+PS+TP L R EEL +L+G+G GERK ++RIYDY
Sbjct: 127 CNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDY 186
Query: 237 DVYNDLGMPDSILKSDLVRPVLGGKE-HPYPRRCRTGHPKSSKDPASESWSLSVYVPRDE 295
DVYNDLG PD K L RPVLGG PYPRR RTG + DP +E YVPRDE
Sbjct: 187 DVYNDLGNPDKSEK--LARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDE 244
Query: 296 AFSLLKTAQFSATGVYSALHAVIPFVESILRIGKDK-GFPSLEAIDKLFNEGVELPPEIE 354
LK+ G S V P ES + F S + + L+ G++LP ++
Sbjct: 245 NLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDVI 304
Query: 355 KLPSWLKILPNFFKSIANTGKDILRFETPETLKRDKLFWLRDEEFGRETLAGLNPYGISL 414
L ++ +++ G+ IL+F P ++ + W+ DEEF RE +AG+NP I
Sbjct: 305 STIIPLPVIKELYRT---DGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRG 361
Query: 415 VADWPLKSTLDPETYGPTESAITKELIEKEIGGSMTVEEAIKQKKLFIIDYHDALLPYVE 474
+ ++P KS LDP YG S IT + ++ + T++EA+ ++LF++DYHD +PYV
Sbjct: 362 LEEFPPKSNLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVR 418
Query: 475 KVRQIKDTTLYGSRTVFFLNPDGTLRPLAIELTRPPMDG--KPQWKQVFTPSTGNSTESW 532
++ Q+ Y +RT+ FL DGTL+P+AIEL+ P G QV P+ ES
Sbjct: 419 QINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAK-EGVEST 477
Query: 533 LWRLAKAHVLAHDSGYHQLISHWLRTHCCVEPYVIATNRRLSAMHPINRLLKPHFRYTME 592
+W LAKA+V+ +DS YHQL+SHWL TH +EP+VIAT+R LS +HPI +LL PH+R M
Sbjct: 478 IWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMN 537
Query: 593 INALARKVLINADGIFETNFFPGKYCMEFSSVIYDKHWRFDNEGLPKDLIRRGIAVEDPK 652
INALAR+ LINA+GI ET F P KY +E SS +Y K+W F ++ LP DLI+RG+A++DP
Sbjct: 538 INALARQSLINANGIVETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPS 596
Query: 653 APHGLKLNIEDYPYANDGLDLWDALKQWVTNYVNHYYPDPSLVESDEELQAWWTEIRTVG 712
PHG++L IEDYPYA DGL++W A+K WV YV YY V++D ELQ WW E G
Sbjct: 597 TPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKG 656
Query: 713 HAEKKDEPWWPVLKTPQDLIEIITTIAWVASGHHAAVNFGQYLYGGYFPNRPTVARTNLP 772
H + KD+PWWP L+T +DL+E+ I W+AS HAAVNFGQY YGG NRPT +R LP
Sbjct: 657 HGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLP 716
Query: 773 NEDQTKEEWKSFLEKPEAALLRCFPAQFQALTVMLVIDLLSTHSPDEEYLGKEMEPAWGD 832
++ E++ + E A LR ++ L + VI++LSTH+ DE YLG+ P W
Sbjct: 717 --EKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTS 774
Query: 833 DPVIKAAFEEFNLKMQELERIIDDRNSNENLK-NRTGAAIVPYELLKPFSEPGATGKGVP 891
D AF++F K++E+E + RN++ +L+ NR G +PY LL P SE G T +G+P
Sbjct: 775 DSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIP 834
Query: 892 YSISI 896
SISI
Sbjct: 835 NSISI 839
>pdb|3BNE|A Chain A, Lipoxygenase-1 (Soybean) I553a Mutant
Length = 839
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/845 (42%), Positives = 497/845 (58%), Gaps = 30/845 (3%)
Query: 70 KVKAVITVKP-----IVSDPLAVEKLIG----TLVLELVSAELDPETGKEK---PTIKSR 117
K+K + + P + D AV+ L ++ L+L+SA GK K T
Sbjct: 7 KIKGTVVLMPKNELEVNPDGSAVDNLNAFLGRSVSLQLISATKADAHGKGKVGKDTFLEG 66
Query: 118 AHRSLFTDDDGNLKYKTEFDVPSNFGEVGAILVEADQLTETFLKDIALDGLRN-GPVNIA 176
+ SL T G + F+ + G GA ++ E FLK + L+ + N G +
Sbjct: 67 INTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFV 126
Query: 177 CDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLARLRAEELNNLQGDGQGERKIHERIYDY 236
C+SW+ + K RIFF N +Y+PS+TP L R EEL +L+G+G GERK ++RIYDY
Sbjct: 127 CNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDY 186
Query: 237 DVYNDLGMPDSILKSDLVRPVLGGKE-HPYPRRCRTGHPKSSKDPASESWSLSVYVPRDE 295
DVYNDLG PD K L RPVLGG PYPRR RTG + DP +E YVPRDE
Sbjct: 187 DVYNDLGNPDKSEK--LARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDE 244
Query: 296 AFSLLKTAQFSATGVYSALHAVIPFVESILRIGKDK-GFPSLEAIDKLFNEGVELPPEIE 354
LK+ G S V P ES + F S + + L+ G++LP ++
Sbjct: 245 NLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDVI 304
Query: 355 KLPSWLKILPNFFKSIANTGKDILRFETPETLKRDKLFWLRDEEFGRETLAGLNPYGISL 414
L ++ +++ G+ IL+F P ++ + W+ DEEF RE +AG+NP I
Sbjct: 305 STIIPLPVIKELYRT---DGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRG 361
Query: 415 VADWPLKSTLDPETYGPTESAITKELIEKEIGGSMTVEEAIKQKKLFIIDYHDALLPYVE 474
+ ++P KS LDP YG S IT + ++ + T++EA+ ++LF++DYHD +PYV
Sbjct: 362 LEEFPPKSNLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVR 418
Query: 475 KVRQIKDTTLYGSRTVFFLNPDGTLRPLAIELTRPPMDG--KPQWKQVFTPSTGNSTESW 532
++ Q+ Y +RT+ FL DGTL+P+AIEL+ P G QV P+ ES
Sbjct: 419 QINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAK-EGVEST 477
Query: 533 LWRLAKAHVLAHDSGYHQLISHWLRTHCCVEPYVIATNRRLSAMHPINRLLKPHFRYTME 592
+W LAKA+V+ +DS YHQL+SHWL TH +EP+VIAT+R LS +HPI +LL PH+R M
Sbjct: 478 IWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMN 537
Query: 593 INALARKVLINADGIFETNFFPGKYCMEFSSVIYDKHWRFDNEGLPKDLIRRGIAVEDPK 652
INALAR+ LINA+GI ET F P KY +E SS +Y K+W F ++ LP DLI+RG+A++DP
Sbjct: 538 INALARQSLINANGIAETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPS 596
Query: 653 APHGLKLNIEDYPYANDGLDLWDALKQWVTNYVNHYYPDPSLVESDEELQAWWTEIRTVG 712
PHG++L IEDYPYA DGL++W A+K WV YV YY V++D ELQ WW E G
Sbjct: 597 TPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKG 656
Query: 713 HAEKKDEPWWPVLKTPQDLIEIITTIAWVASGHHAAVNFGQYLYGGYFPNRPTVARTNLP 772
H + KD+PWWP L+T +DL+E+ I W+AS HAAVNFGQY YGG NRPT +R LP
Sbjct: 657 HGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLP 716
Query: 773 NEDQTKEEWKSFLEKPEAALLRCFPAQFQALTVMLVIDLLSTHSPDEEYLGKEMEPAWGD 832
++ E++ + E A LR ++ L + VI++LSTH+ DE YLG+ P W
Sbjct: 717 --EKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTS 774
Query: 833 DPVIKAAFEEFNLKMQELERIIDDRNSNENLK-NRTGAAIVPYELLKPFSEPGATGKGVP 891
D AF++F K++E+E + RN++ +L+ NR G +PY LL P SE G T +G+P
Sbjct: 775 DSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIP 834
Query: 892 YSISI 896
SISI
Sbjct: 835 NSISI 839
>pdb|3BNC|A Chain A, Lipoxygenase-1 (Soybean) I553g Mutant
Length = 839
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/845 (42%), Positives = 497/845 (58%), Gaps = 30/845 (3%)
Query: 70 KVKAVITVKP-----IVSDPLAVEKLIG----TLVLELVSAELDPETGKEK---PTIKSR 117
K+K + + P + D AV+ L ++ L+L+SA GK K T
Sbjct: 7 KIKGTVVLMPKNELEVNPDGSAVDNLNAFLGRSVSLQLISATKADAHGKGKVGKDTFLEG 66
Query: 118 AHRSLFTDDDGNLKYKTEFDVPSNFGEVGAILVEADQLTETFLKDIALDGLRN-GPVNIA 176
+ SL T G + F+ + G GA ++ E FLK + L+ + N G +
Sbjct: 67 INTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFV 126
Query: 177 CDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLARLRAEELNNLQGDGQGERKIHERIYDY 236
C+SW+ + K RIFF N +Y+PS+TP L R EEL +L+G+G GERK ++RIYDY
Sbjct: 127 CNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDY 186
Query: 237 DVYNDLGMPDSILKSDLVRPVLGGKE-HPYPRRCRTGHPKSSKDPASESWSLSVYVPRDE 295
DVYNDLG PD K L RPVLGG PYPRR RTG + DP +E YVPRDE
Sbjct: 187 DVYNDLGNPDKSEK--LARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDE 244
Query: 296 AFSLLKTAQFSATGVYSALHAVIPFVESILRIGKDK-GFPSLEAIDKLFNEGVELPPEIE 354
LK+ G S V P ES + F S + + L+ G++LP ++
Sbjct: 245 NLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDVI 304
Query: 355 KLPSWLKILPNFFKSIANTGKDILRFETPETLKRDKLFWLRDEEFGRETLAGLNPYGISL 414
L ++ +++ G+ IL+F P ++ + W+ DEEF RE +AG+NP I
Sbjct: 305 STIIPLPVIKELYRT---DGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRG 361
Query: 415 VADWPLKSTLDPETYGPTESAITKELIEKEIGGSMTVEEAIKQKKLFIIDYHDALLPYVE 474
+ ++P KS LDP YG S IT + ++ + T++EA+ ++LF++DYHD +PYV
Sbjct: 362 LEEFPPKSNLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVR 418
Query: 475 KVRQIKDTTLYGSRTVFFLNPDGTLRPLAIELTRPPMDG--KPQWKQVFTPSTGNSTESW 532
++ Q+ Y +RT+ FL DGTL+P+AIEL+ P G QV P+ ES
Sbjct: 419 QINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAK-EGVEST 477
Query: 533 LWRLAKAHVLAHDSGYHQLISHWLRTHCCVEPYVIATNRRLSAMHPINRLLKPHFRYTME 592
+W LAKA+V+ +DS YHQL+SHWL TH +EP+VIAT+R LS +HPI +LL PH+R M
Sbjct: 478 IWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMN 537
Query: 593 INALARKVLINADGIFETNFFPGKYCMEFSSVIYDKHWRFDNEGLPKDLIRRGIAVEDPK 652
INALAR+ LINA+GI ET F P KY +E SS +Y K+W F ++ LP DLI+RG+A++DP
Sbjct: 538 INALARQSLINANGIGETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPS 596
Query: 653 APHGLKLNIEDYPYANDGLDLWDALKQWVTNYVNHYYPDPSLVESDEELQAWWTEIRTVG 712
PHG++L IEDYPYA DGL++W A+K WV YV YY V++D ELQ WW E G
Sbjct: 597 TPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKG 656
Query: 713 HAEKKDEPWWPVLKTPQDLIEIITTIAWVASGHHAAVNFGQYLYGGYFPNRPTVARTNLP 772
H + KD+PWWP L+T +DL+E+ I W+AS HAAVNFGQY YGG NRPT +R LP
Sbjct: 657 HGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLP 716
Query: 773 NEDQTKEEWKSFLEKPEAALLRCFPAQFQALTVMLVIDLLSTHSPDEEYLGKEMEPAWGD 832
++ E++ + E A LR ++ L + VI++LSTH+ DE YLG+ P W
Sbjct: 717 --EKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTS 774
Query: 833 DPVIKAAFEEFNLKMQELERIIDDRNSNENLK-NRTGAAIVPYELLKPFSEPGATGKGVP 891
D AF++F K++E+E + RN++ +L+ NR G +PY LL P SE G T +G+P
Sbjct: 775 DSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIP 834
Query: 892 YSISI 896
SISI
Sbjct: 835 NSISI 839
>pdb|1FGR|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant
Length = 839
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/845 (42%), Positives = 497/845 (58%), Gaps = 30/845 (3%)
Query: 70 KVKAVITVKP-----IVSDPLAVEKLIG----TLVLELVSAELDPETGKEK---PTIKSR 117
K+K + + P + D AV+ L ++ L+L+SA GK K T
Sbjct: 7 KIKGTVVLMPKNELEVNPDGSAVDNLNAFLGRSVSLQLISATKADAHGKGKVGKDTFLEG 66
Query: 118 AHRSLFTDDDGNLKYKTEFDVPSNFGEVGAILVEADQLTETFLKDIALDGLRN-GPVNIA 176
+ SL T G + F+ + G GA ++ E FLK + L+ + N G +
Sbjct: 67 INTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFV 126
Query: 177 CDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLARLRAEELNNLQGDGQGERKIHERIYDY 236
C+SW+ + K RIFF N +Y+PS+TP L R EEL +L+G+G GERK ++RIYDY
Sbjct: 127 CNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDY 186
Query: 237 DVYNDLGMPDSILKSDLVRPVLGGKE-HPYPRRCRTGHPKSSKDPASESWSLSVYVPRDE 295
DVYNDLG PD K L RPVLGG PYPRR RTG + DP +E YVPRDE
Sbjct: 187 DVYNDLGNPDKSEK--LARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDE 244
Query: 296 AFSLLKTAQFSATGVYSALHAVIPFVESILRIGKDK-GFPSLEAIDKLFNEGVELPPEIE 354
LK+ G S V P ES + F S + + L+ G++LP ++
Sbjct: 245 NLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDVI 304
Query: 355 KLPSWLKILPNFFKSIANTGKDILRFETPETLKRDKLFWLRDEEFGRETLAGLNPYGISL 414
L ++ +++ G+ IL+F P ++ + W+ DEEF RE +AG+NP I
Sbjct: 305 STIIPLPVIKELYRT---DGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRG 361
Query: 415 VADWPLKSTLDPETYGPTESAITKELIEKEIGGSMTVEEAIKQKKLFIIDYHDALLPYVE 474
+ ++P KS LDP YG S IT + ++ + T++EA+ ++LF++DYHD +PYV
Sbjct: 362 LEEFPPKSNLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVR 418
Query: 475 KVRQIKDTTLYGSRTVFFLNPDGTLRPLAIELTRPPMDG--KPQWKQVFTPSTGNSTESW 532
++ Q+ Y +RT+ FL DGTL+P+AIEL+ P G QV P+ ES
Sbjct: 419 QINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAK-EGVEST 477
Query: 533 LWRLAKAHVLAHDSGYHQLISHWLRTHCCVEPYVIATNRRLSAMHPINRLLKPHFRYTME 592
+W LAKA+V+ +DS YHQL+SHWL TH +EP+VIAT+R LS +HPI +LL PH+R M
Sbjct: 478 IWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMN 537
Query: 593 INALARKVLINADGIFETNFFPGKYCMEFSSVIYDKHWRFDNEGLPKDLIRRGIAVEDPK 652
INALAR+ LINA+GI ET F P KY +E SS +Y K+W F ++ LP DLI+RG+A++DP
Sbjct: 538 INALARQSLINANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPS 596
Query: 653 APHGLKLNIEDYPYANDGLDLWDALKQWVTNYVNHYYPDPSLVESDEELQAWWTEIRTVG 712
PHG++L IEDYPYA DGL++W A+K WV YV YY V++D ELQ WW E G
Sbjct: 597 TPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKG 656
Query: 713 HAEKKDEPWWPVLKTPQDLIEIITTIAWVASGHHAAVNFGQYLYGGYFPNRPTVARTNLP 772
H + KD+PWWP L+T +DL+E+ I W+AS HAAVNFG+Y YGG NRPT +R LP
Sbjct: 657 HGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGEYPYGGLIMNRPTASRRLLP 716
Query: 773 NEDQTKEEWKSFLEKPEAALLRCFPAQFQALTVMLVIDLLSTHSPDEEYLGKEMEPAWGD 832
++ E++ + E A LR ++ L + VI++LSTH+ DE YLG+ P W
Sbjct: 717 --EKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTS 774
Query: 833 DPVIKAAFEEFNLKMQELERIIDDRNSNENLK-NRTGAAIVPYELLKPFSEPGATGKGVP 891
D AF++F K++E+E + RN++ +L+ NR G +PY LL P SE G T +G+P
Sbjct: 775 DSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIP 834
Query: 892 YSISI 896
SISI
Sbjct: 835 NSISI 839
>pdb|1FGQ|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant
Length = 839
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/845 (42%), Positives = 497/845 (58%), Gaps = 30/845 (3%)
Query: 70 KVKAVITVKP-----IVSDPLAVEKLIG----TLVLELVSAELDPETGKEK---PTIKSR 117
K+K + + P + D AV+ L ++ L+L+SA GK K T
Sbjct: 7 KIKGTVVLMPKNELEVNPDGSAVDNLNAFLGRSVSLQLISATKADAHGKGKVGKDTFLEG 66
Query: 118 AHRSLFTDDDGNLKYKTEFDVPSNFGEVGAILVEADQLTETFLKDIALDGLRN-GPVNIA 176
+ SL T G + F+ + G GA ++ E FLK + L+ + N G +
Sbjct: 67 INTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFV 126
Query: 177 CDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLARLRAEELNNLQGDGQGERKIHERIYDY 236
C+SW+ + K RIFF N +Y+PS+TP L R EEL +L+G+G GERK ++RIYDY
Sbjct: 127 CNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDY 186
Query: 237 DVYNDLGMPDSILKSDLVRPVLGGKE-HPYPRRCRTGHPKSSKDPASESWSLSVYVPRDE 295
DVYNDLG PD K L RPVLGG PYPRR RTG + DP +E YVPRDE
Sbjct: 187 DVYNDLGNPDKSEK--LARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDE 244
Query: 296 AFSLLKTAQFSATGVYSALHAVIPFVESILRIGKDK-GFPSLEAIDKLFNEGVELPPEIE 354
LK+ G S V P ES + F S + + L+ G++LP ++
Sbjct: 245 NLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDVI 304
Query: 355 KLPSWLKILPNFFKSIANTGKDILRFETPETLKRDKLFWLRDEEFGRETLAGLNPYGISL 414
L ++ +++ G+ IL+F P ++ + W+ DEEF RE +AG+NP I
Sbjct: 305 STIIPLPVIKELYRT---DGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRG 361
Query: 415 VADWPLKSTLDPETYGPTESAITKELIEKEIGGSMTVEEAIKQKKLFIIDYHDALLPYVE 474
+ ++P KS LDP YG S IT + ++ + T++EA+ ++LF++DYHD +PYV
Sbjct: 362 LEEFPPKSNLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVR 418
Query: 475 KVRQIKDTTLYGSRTVFFLNPDGTLRPLAIELTRPPMDG--KPQWKQVFTPSTGNSTESW 532
++ Q+ Y +RT+ FL DGTL+P+AIEL+ P G QV P+ ES
Sbjct: 419 QINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAK-EGVEST 477
Query: 533 LWRLAKAHVLAHDSGYHQLISHWLRTHCCVEPYVIATNRRLSAMHPINRLLKPHFRYTME 592
+W LAKA+V+ +DS YH+L+SHWL TH +EP+VIAT+R LS +HPI +LL PH+R M
Sbjct: 478 IWLLAKAYVIVNDSCYHELMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMN 537
Query: 593 INALARKVLINADGIFETNFFPGKYCMEFSSVIYDKHWRFDNEGLPKDLIRRGIAVEDPK 652
INALAR+ LINA+GI ET F P KY +E SS +Y K+W F ++ LP DLI+RG+A++DP
Sbjct: 538 INALARQSLINANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPS 596
Query: 653 APHGLKLNIEDYPYANDGLDLWDALKQWVTNYVNHYYPDPSLVESDEELQAWWTEIRTVG 712
PHG++L IEDYPYA DGL++W A+K WV YV YY V++D ELQ WW E G
Sbjct: 597 TPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKG 656
Query: 713 HAEKKDEPWWPVLKTPQDLIEIITTIAWVASGHHAAVNFGQYLYGGYFPNRPTVARTNLP 772
H + KD+PWWP L+T +DL+E+ I W+AS HAAVNFGQY YGG NRPT +R LP
Sbjct: 657 HGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLP 716
Query: 773 NEDQTKEEWKSFLEKPEAALLRCFPAQFQALTVMLVIDLLSTHSPDEEYLGKEMEPAWGD 832
++ E++ + E A LR ++ L + VI++LSTH+ DE YLG+ P W
Sbjct: 717 --EKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTS 774
Query: 833 DPVIKAAFEEFNLKMQELERIIDDRNSNENLK-NRTGAAIVPYELLKPFSEPGATGKGVP 891
D AF++F K++E+E + RN++ +L+ NR G +PY LL P SE G T +G+P
Sbjct: 775 DSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIP 834
Query: 892 YSISI 896
SISI
Sbjct: 835 NSISI 839
>pdb|1FGM|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694h Mutant
Length = 839
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/845 (42%), Positives = 497/845 (58%), Gaps = 30/845 (3%)
Query: 70 KVKAVITVKP-----IVSDPLAVEKLIG----TLVLELVSAELDPETGKEK---PTIKSR 117
K+K + + P + D AV+ L ++ L+L+SA GK K T
Sbjct: 7 KIKGTVVLMPKNELEVNPDGSAVDNLNAFLGRSVSLQLISATKADAHGKGKVGKDTFLEG 66
Query: 118 AHRSLFTDDDGNLKYKTEFDVPSNFGEVGAILVEADQLTETFLKDIALDGLRN-GPVNIA 176
+ SL T G + F+ + G GA ++ E FLK + L+ + N G +
Sbjct: 67 INTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFV 126
Query: 177 CDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLARLRAEELNNLQGDGQGERKIHERIYDY 236
C+SW+ + K RIFF N +Y+PS+TP L R EEL +L+G+G GERK ++RIYDY
Sbjct: 127 CNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDY 186
Query: 237 DVYNDLGMPDSILKSDLVRPVLGGKE-HPYPRRCRTGHPKSSKDPASESWSLSVYVPRDE 295
DVYNDLG PD K L RPVLGG PYPRR RTG + DP +E YVPRDE
Sbjct: 187 DVYNDLGNPDKSEK--LARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDE 244
Query: 296 AFSLLKTAQFSATGVYSALHAVIPFVESILRIGKDK-GFPSLEAIDKLFNEGVELPPEIE 354
LK+ G S V P ES + F S + + L+ G++LP ++
Sbjct: 245 NLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDVI 304
Query: 355 KLPSWLKILPNFFKSIANTGKDILRFETPETLKRDKLFWLRDEEFGRETLAGLNPYGISL 414
L ++ +++ G+ IL+F P ++ + W+ DEEF RE +AG+NP I
Sbjct: 305 STIIPLPVIKELYRT---DGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRG 361
Query: 415 VADWPLKSTLDPETYGPTESAITKELIEKEIGGSMTVEEAIKQKKLFIIDYHDALLPYVE 474
+ ++P KS LDP YG S IT + ++ + T++EA+ ++LF++DYHD +PYV
Sbjct: 362 LEEFPPKSNLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVR 418
Query: 475 KVRQIKDTTLYGSRTVFFLNPDGTLRPLAIELTRPPMDG--KPQWKQVFTPSTGNSTESW 532
++ Q+ Y +RT+ FL DGTL+P+AIEL+ P G QV P+ ES
Sbjct: 419 QINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAK-EGVEST 477
Query: 533 LWRLAKAHVLAHDSGYHQLISHWLRTHCCVEPYVIATNRRLSAMHPINRLLKPHFRYTME 592
+W LAKA+V+ +DS YHQL+SHWL TH +EP+VIAT+R LS +HPI +LL PH+R M
Sbjct: 478 IWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMN 537
Query: 593 INALARKVLINADGIFETNFFPGKYCMEFSSVIYDKHWRFDNEGLPKDLIRRGIAVEDPK 652
INALAR+ LINA+GI ET F P KY +E SS +Y K+W F ++ LP DLI+RG+A++DP
Sbjct: 538 INALARQSLINANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPS 596
Query: 653 APHGLKLNIEDYPYANDGLDLWDALKQWVTNYVNHYYPDPSLVESDEELQAWWTEIRTVG 712
PHG++L IEDYPYA DGL++W A+K WV YV YY V++D ELQ WW E G
Sbjct: 597 TPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKG 656
Query: 713 HAEKKDEPWWPVLKTPQDLIEIITTIAWVASGHHAAVNFGQYLYGGYFPNRPTVARTNLP 772
H + KD+PWWP L+T +DL+E+ I W+AS HAAV+FGQY YGG NRPT +R LP
Sbjct: 657 HGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVHFGQYPYGGLIMNRPTASRRLLP 716
Query: 773 NEDQTKEEWKSFLEKPEAALLRCFPAQFQALTVMLVIDLLSTHSPDEEYLGKEMEPAWGD 832
++ E++ + E A LR ++ L + VI++LSTH+ DE YLG+ P W
Sbjct: 717 --EKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTS 774
Query: 833 DPVIKAAFEEFNLKMQELERIIDDRNSNENLK-NRTGAAIVPYELLKPFSEPGATGKGVP 891
D AF++F K++E+E + RN++ +L+ NR G +PY LL P SE G T +G+P
Sbjct: 775 DSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIP 834
Query: 892 YSISI 896
SISI
Sbjct: 835 NSISI 839
>pdb|1FGT|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant
Length = 839
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/845 (42%), Positives = 496/845 (58%), Gaps = 30/845 (3%)
Query: 70 KVKAVITVKP-----IVSDPLAVEKLIG----TLVLELVSAELDPETGKEK---PTIKSR 117
K+K + + P + D AV+ L ++ L+L+SA GK K T
Sbjct: 7 KIKGTVVLMPKNELEVNPDGSAVDNLNAFLGRSVSLQLISATKADAHGKGKVGKDTFLEG 66
Query: 118 AHRSLFTDDDGNLKYKTEFDVPSNFGEVGAILVEADQLTETFLKDIALDGLRN-GPVNIA 176
+ SL T G + F+ + G GA ++ E FLK + L+ + N G +
Sbjct: 67 INTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFV 126
Query: 177 CDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLARLRAEELNNLQGDGQGERKIHERIYDY 236
C+SW+ + K RIFF N +Y+PS+TP L R EEL +L+G+G GERK ++RIYDY
Sbjct: 127 CNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDY 186
Query: 237 DVYNDLGMPDSILKSDLVRPVLGGKE-HPYPRRCRTGHPKSSKDPASESWSLSVYVPRDE 295
DVYNDLG PD K L RPVLGG PYPRR RTG + DP +E YVPRDE
Sbjct: 187 DVYNDLGNPDKSEK--LARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDE 244
Query: 296 AFSLLKTAQFSATGVYSALHAVIPFVESILRIGKDK-GFPSLEAIDKLFNEGVELPPEIE 354
LK+ G S V P ES + F S + + L+ G++LP ++
Sbjct: 245 NLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDVI 304
Query: 355 KLPSWLKILPNFFKSIANTGKDILRFETPETLKRDKLFWLRDEEFGRETLAGLNPYGISL 414
L ++ +++ G+ IL+F P ++ + W+ DEEF RE +AG+NP I
Sbjct: 305 STIIPLPVIKELYRT---DGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRG 361
Query: 415 VADWPLKSTLDPETYGPTESAITKELIEKEIGGSMTVEEAIKQKKLFIIDYHDALLPYVE 474
+ ++P KS LDP YG S IT + ++ + T++EA+ ++LF++DYHD +PYV
Sbjct: 362 LEEFPPKSNLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVR 418
Query: 475 KVRQIKDTTLYGSRTVFFLNPDGTLRPLAIELTRPPMDG--KPQWKQVFTPSTGNSTESW 532
++ Q+ Y +RT+ FL DGTL+P+AIEL+ P G QV P+ ES
Sbjct: 419 QINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAK-EGVEST 477
Query: 533 LWRLAKAHVLAHDSGYHQLISHWLRTHCCVEPYVIATNRRLSAMHPINRLLKPHFRYTME 592
+W LAKA+V+ +DS YHQL+SHWL TH +EP+VIAT+R LS +HPI +LL PH+R M
Sbjct: 478 IWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMN 537
Query: 593 INALARKVLINADGIFETNFFPGKYCMEFSSVIYDKHWRFDNEGLPKDLIRRGIAVEDPK 652
INALAR+ LINA+GI ET F P KY +E SS +Y K+W F ++ LP DLI+RG+A++DP
Sbjct: 538 INALARQSLINANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPS 596
Query: 653 APHGLKLNIEDYPYANDGLDLWDALKQWVTNYVNHYYPDPSLVESDEELQAWWTEIRTVG 712
PHG++L IEDYPYA DGL++W A+K WV YV YY V++D ELQ WW E G
Sbjct: 597 TPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKG 656
Query: 713 HAEKKDEPWWPVLKTPQDLIEIITTIAWVASGHHAAVNFGQYLYGGYFPNRPTVARTNLP 772
H + KD+PWWP L+T +DL+E+ I W+AS HAAVNFG Y YGG NRPT +R LP
Sbjct: 657 HGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGNYPYGGLIMNRPTASRRLLP 716
Query: 773 NEDQTKEEWKSFLEKPEAALLRCFPAQFQALTVMLVIDLLSTHSPDEEYLGKEMEPAWGD 832
++ E++ + E A LR ++ L + VI++LSTH+ DE YLG+ P W
Sbjct: 717 --EKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTS 774
Query: 833 DPVIKAAFEEFNLKMQELERIIDDRNSNENLK-NRTGAAIVPYELLKPFSEPGATGKGVP 891
D AF++F K++E+E + RN++ +L+ NR G +PY LL P SE G T +G+P
Sbjct: 775 DSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIP 834
Query: 892 YSISI 896
SISI
Sbjct: 835 NSISI 839
>pdb|1FGO|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant
Length = 839
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/845 (42%), Positives = 496/845 (58%), Gaps = 30/845 (3%)
Query: 70 KVKAVITVKP-----IVSDPLAVEKLIG----TLVLELVSAELDPETGKEK---PTIKSR 117
K+K + + P + D AV+ L ++ L+L+SA GK K T
Sbjct: 7 KIKGTVVLMPKNELEVNPDGSAVDNLNAFLGRSVSLQLISATKADAHGKGKVGKDTFLEG 66
Query: 118 AHRSLFTDDDGNLKYKTEFDVPSNFGEVGAILVEADQLTETFLKDIALDGLRN-GPVNIA 176
+ SL T G + F+ + G GA ++ E FLK + L+ + N G +
Sbjct: 67 INTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFV 126
Query: 177 CDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLARLRAEELNNLQGDGQGERKIHERIYDY 236
C+SW+ + K RIFF N +Y+PS+TP L R EEL +L+G+G GERK ++RIYDY
Sbjct: 127 CNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDY 186
Query: 237 DVYNDLGMPDSILKSDLVRPVLGGKE-HPYPRRCRTGHPKSSKDPASESWSLSVYVPRDE 295
DVYNDLG PD K L RPVLGG PYPRR RTG + DP +E YVPRDE
Sbjct: 187 DVYNDLGNPDKSEK--LARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDE 244
Query: 296 AFSLLKTAQFSATGVYSALHAVIPFVESILRIGKDK-GFPSLEAIDKLFNEGVELPPEIE 354
LK+ G S V P ES + F S + + L+ G++LP ++
Sbjct: 245 NLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDVI 304
Query: 355 KLPSWLKILPNFFKSIANTGKDILRFETPETLKRDKLFWLRDEEFGRETLAGLNPYGISL 414
L ++ +++ G+ IL+F P ++ + W+ DEEF RE +AG+NP I
Sbjct: 305 STIIPLPVIKELYRT---DGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRG 361
Query: 415 VADWPLKSTLDPETYGPTESAITKELIEKEIGGSMTVEEAIKQKKLFIIDYHDALLPYVE 474
+ ++P KS LDP YG S IT + ++ + T++EA+ ++LF++DYHD +PYV
Sbjct: 362 LEEFPPKSNLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVR 418
Query: 475 KVRQIKDTTLYGSRTVFFLNPDGTLRPLAIELTRPPMDG--KPQWKQVFTPSTGNSTESW 532
++ Q+ Y +RT+ FL DGTL+P+AIEL+ P G QV P+ ES
Sbjct: 419 QINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAK-EGVEST 477
Query: 533 LWRLAKAHVLAHDSGYHQLISHWLRTHCCVEPYVIATNRRLSAMHPINRLLKPHFRYTME 592
+W LAKA+V+ +DS YH L+SHWL TH +EP+VIAT+R LS +HPI +LL PH+R M
Sbjct: 478 IWLLAKAYVIVNDSCYHALMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMN 537
Query: 593 INALARKVLINADGIFETNFFPGKYCMEFSSVIYDKHWRFDNEGLPKDLIRRGIAVEDPK 652
INALAR+ LINA+GI ET F P KY +E SS +Y K+W F ++ LP DLI+RG+A++DP
Sbjct: 538 INALARQSLINANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPS 596
Query: 653 APHGLKLNIEDYPYANDGLDLWDALKQWVTNYVNHYYPDPSLVESDEELQAWWTEIRTVG 712
PHG++L IEDYPYA DGL++W A+K WV YV YY V++D ELQ WW E G
Sbjct: 597 TPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKG 656
Query: 713 HAEKKDEPWWPVLKTPQDLIEIITTIAWVASGHHAAVNFGQYLYGGYFPNRPTVARTNLP 772
H + KD+PWWP L+T +DL+E+ I W+AS HAAVNFGQY YGG NRPT +R LP
Sbjct: 657 HGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLP 716
Query: 773 NEDQTKEEWKSFLEKPEAALLRCFPAQFQALTVMLVIDLLSTHSPDEEYLGKEMEPAWGD 832
++ E++ + E A LR ++ L + VI++LSTH+ DE YLG+ P W
Sbjct: 717 --EKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTS 774
Query: 833 DPVIKAAFEEFNLKMQELERIIDDRNSNENLK-NRTGAAIVPYELLKPFSEPGATGKGVP 891
D AF++F K++E+E + RN++ +L+ NR G +PY LL P SE G T +G+P
Sbjct: 775 DSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIP 834
Query: 892 YSISI 896
SISI
Sbjct: 835 NSISI 839
>pdb|1Y4K|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694g Mutant
Length = 839
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/845 (42%), Positives = 496/845 (58%), Gaps = 30/845 (3%)
Query: 70 KVKAVITVKP-----IVSDPLAVEKLIG----TLVLELVSAELDPETGKEK---PTIKSR 117
K+K + + P + D AV+ L ++ L+L+SA GK K T
Sbjct: 7 KIKGTVVLMPKNELEVNPDGSAVDNLNAFLGRSVSLQLISATKADAHGKGKVGKDTFLEG 66
Query: 118 AHRSLFTDDDGNLKYKTEFDVPSNFGEVGAILVEADQLTETFLKDIALDGLRN-GPVNIA 176
+ SL T G + F+ + G GA ++ E FLK + L+ + N G +
Sbjct: 67 INTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFV 126
Query: 177 CDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLARLRAEELNNLQGDGQGERKIHERIYDY 236
C+SW+ + K RIFF N +Y+PS+TP L R EEL +L+G+G GERK ++RIYDY
Sbjct: 127 CNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDY 186
Query: 237 DVYNDLGMPDSILKSDLVRPVLGGKE-HPYPRRCRTGHPKSSKDPASESWSLSVYVPRDE 295
DVYNDLG PD K L RPVLGG PYPRR RTG + DP +E YVPRDE
Sbjct: 187 DVYNDLGNPDKSEK--LARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDE 244
Query: 296 AFSLLKTAQFSATGVYSALHAVIPFVESILRIGKDK-GFPSLEAIDKLFNEGVELPPEIE 354
LK+ G S V P ES + F S + + L+ G++LP ++
Sbjct: 245 NLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDVI 304
Query: 355 KLPSWLKILPNFFKSIANTGKDILRFETPETLKRDKLFWLRDEEFGRETLAGLNPYGISL 414
L ++ +++ G+ IL+F P ++ + W+ DEEF RE +AG+NP I
Sbjct: 305 STIIPLPVIKELYRT---DGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRG 361
Query: 415 VADWPLKSTLDPETYGPTESAITKELIEKEIGGSMTVEEAIKQKKLFIIDYHDALLPYVE 474
+ ++P KS LDP YG S IT + ++ + T++EA+ ++LF++DYHD +PYV
Sbjct: 362 LEEFPPKSNLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVR 418
Query: 475 KVRQIKDTTLYGSRTVFFLNPDGTLRPLAIELTRPPMDG--KPQWKQVFTPSTGNSTESW 532
++ Q+ Y +RT+ FL DGTL+P+AIEL+ P G QV P+ ES
Sbjct: 419 QINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAK-EGVEST 477
Query: 533 LWRLAKAHVLAHDSGYHQLISHWLRTHCCVEPYVIATNRRLSAMHPINRLLKPHFRYTME 592
+W LAKA+V+ +DS YHQL+SHWL TH +EP+VIAT+R LS +HPI +LL PH+R M
Sbjct: 478 IWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMN 537
Query: 593 INALARKVLINADGIFETNFFPGKYCMEFSSVIYDKHWRFDNEGLPKDLIRRGIAVEDPK 652
INALAR+ LINA+GI ET F P KY +E SS +Y K+W F ++ LP DLI+RG+A++DP
Sbjct: 538 INALARQSLINANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPS 596
Query: 653 APHGLKLNIEDYPYANDGLDLWDALKQWVTNYVNHYYPDPSLVESDEELQAWWTEIRTVG 712
PHG++L IEDYPYA DGL++W A+K WV YV YY V++D ELQ WW E G
Sbjct: 597 TPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKG 656
Query: 713 HAEKKDEPWWPVLKTPQDLIEIITTIAWVASGHHAAVNFGQYLYGGYFPNRPTVARTNLP 772
H + KD+PWWP L+T +DL+E+ I W+AS HAAV FGQY YGG NRPT +R LP
Sbjct: 657 HGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVGFGQYPYGGLIMNRPTASRRLLP 716
Query: 773 NEDQTKEEWKSFLEKPEAALLRCFPAQFQALTVMLVIDLLSTHSPDEEYLGKEMEPAWGD 832
++ E++ + E A LR ++ L + VI++LSTH+ DE YLG+ P W
Sbjct: 717 --EKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTS 774
Query: 833 DPVIKAAFEEFNLKMQELERIIDDRNSNENLK-NRTGAAIVPYELLKPFSEPGATGKGVP 891
D AF++F K++E+E + RN++ +L+ NR G +PY LL P SE G T +G+P
Sbjct: 775 DSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIP 834
Query: 892 YSISI 896
SISI
Sbjct: 835 NSISI 839
>pdb|3VF1|A Chain A, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests
A Mechanism For Ca-Regulation
pdb|3VF1|B Chain B, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests
A Mechanism For Ca-Regulation
Length = 698
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 142/504 (28%), Positives = 233/504 (46%), Gaps = 68/504 (13%)
Query: 392 FWLRDEEFGRETLAGLNPYGISLVADWPLKSTLDPETYGPTESAITKELIEKEIGGSMTV 451
+W D FG + L G NP I + PE + + E++EK + T+
Sbjct: 250 YWRDDVWFGSQFLNGSNPEVIR-------RCDKLPENF-----PVKNEMVEKLLDRGYTL 297
Query: 452 EEAIKQKKLFIIDYHDALLPYVEKVRQIKD----TTLYGSRTVFFLNPDGTLRPLAIELT 507
E+A+K+ +FI DY +L + + +D TT G +F+L + + P+AI+L
Sbjct: 298 EKAMKEGLIFITDY--KILEGIPTMDTPEDKRYITTPLG---LFYLKNNDDIIPIAIQLY 352
Query: 508 RPPMDGKPQWKQVFTPSTGNSTESWLWRLAKAHVLAHDSGYHQLISHWLRTHCCVEPYVI 567
+ P + W TP TE W W +AK + D+ YHQ+I+H LR H +EP +
Sbjct: 353 QQPGENNSIW----TPL--KDTE-WDWIMAKLWLRCADTQYHQMITHLLRCHLMMEPTAV 405
Query: 568 ATNRRLSAMHPINRLLKPHFRYTMEINALARKVLINADGIFETNFFPGKYCMEFSSVIYD 627
++ R L ++HP+ +LL PH + M IN L R LI G + G +
Sbjct: 406 SSWRNLPSVHPVWKLLYPHTKGIMAINTLGRNDLIPTGGAADKVLSIGGGG---QVTLMQ 462
Query: 628 KHWR---FDNEGLPKDLIRRGIAVEDPKAPHGLKLNIEDYPYANDGLDLWDALKQWVTNY 684
KH+R FD+ L KDL +RG+ GL+ + Y +D L LW+ + Q+V +
Sbjct: 463 KHYRSVTFDSYDLVKDLRQRGV--------DGLR----KFYYKDDALLLWNVIHQFVQDI 510
Query: 685 VNHYYPDPSLVESDEELQAWWTEIRTVGH---AEKKDEPWWPVLKTPQDLIEIITTIAWV 741
+ YY D V+ D E+Q W ++ G+ ++ D+ + ++L+ +T + +
Sbjct: 511 IQIYYNDDDSVKKDNEIQDWIRDLHENGYPAGSDGTDKKVPKSFENREELVHFLTVVVFT 570
Query: 742 ASGHHAAVNFGQYLYGGYFPNRPTVARTNLPNEDQTKEEWKSFLEKPEAALLRCFPAQFQ 801
S HAAVNF Q G+ PN PT+ R P E + ++ + Q
Sbjct: 571 CSCQHAAVNFSQMATYGFHPNSPTLMRQPPPTEKG---------KSNHKVIMASLANKHQ 621
Query: 802 ALTVMLVIDLLSTHSPDEEYLGKEMEPAWGDDPVIKAAFEEFNLKMQELERIIDDRNSNE 861
A+T++ V++ L+T P E++LG + +G D AA +F + + + I +RN
Sbjct: 622 AVTMVSVVNALTTIYPTEKFLGDYADNLFG-DAAAHAAMAKFKSNLANITKQITERNQ-- 678
Query: 862 NLKNRTGAAIVPYELLKPFSEPGA 885
+ PY L P P +
Sbjct: 679 -------GMVSPYTWLIPGHVPNS 695
>pdb|3DY5|A Chain A, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura
Homomalla
pdb|3DY5|C Chain C, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura
Homomalla
Length = 1066
Score = 167 bits (423), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 137/515 (26%), Positives = 234/515 (45%), Gaps = 68/515 (13%)
Query: 393 WLRDEEFGRETLAGLNPYGISLVADWPLKSTLDPETYGPTESAITKELIEKEIGGSMTVE 452
W D FG + L G NP ++ P + +T E + + ++
Sbjct: 599 WHEDRWFGYQFLNGANPVILTRCDALP------------SNFPVTNEHVNASLDRGKNLD 646
Query: 453 EAIKQKKLFIIDY--------------HDALLPYVEKVRQIKDTTLYGSR--TVFFLNPD 496
E IK ++I+D+ D + ++ + Y + +F++N
Sbjct: 647 EEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVNKL 706
Query: 497 GTLRPLAIELTRPPMDGKPQWKQVFTPSTGNSTESWLWRLAKAHVLAHDSGYHQLISHWL 556
G L P+AI++ + P P W TP N + W +AK + +S +HQL +H L
Sbjct: 707 GHLMPIAIQINQEPGPENPIW----TPHEENEHD---WMMAKFWLGVAESNFHQLNTHLL 759
Query: 557 RTHCCVEPYVIATNRRLSAMHPINRLLKPHFRYTMEINALARKVLINADGIFETNF-FPG 615
RTH E + ++T R L++ HPI +LL+PH + I+ + RK LI + GI + + G
Sbjct: 760 RTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELIGSGGIVDQSLSLGG 819
Query: 616 KYCMEFSSVIYDKHWRFDNEGLPKDLIRRGIAVEDPKAPHGLKLNIEDYPYANDGLDLWD 675
+ F + K + LP L +RG V+DP G + Y +DGL LW+
Sbjct: 820 GGHVTFMEKCF-KEVNLQDYHLPNALKKRG--VDDPSKLPG-------FYYRDDGLALWE 869
Query: 676 ALKQWVTNYVNHYYPDPSLVESDEELQAWWTEIRTVG---HAEKKDEPWWPVLKTPQDLI 732
A++ ++ + +Y + V+ D E+Q+W ++ G + +D ++ + L
Sbjct: 870 AIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGVPASFESREQLK 929
Query: 733 EIITTIAWVASGHHAAVNFGQYLYGGYFPNRPTVARTNLPNEDQTKEEWKSFLEKPEAAL 792
E++T++ + S HAAVNF Q + G+ PN P + R P K++ ++ L+ ++
Sbjct: 930 EVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPP-----KKKGEATLQ----SI 980
Query: 793 LRCFPAQFQALTVMLVIDLLSTHSPDEEYLGKEMEPAWGDDPVIKAAFEEFNLKMQELER 852
L P++ QA + + +L+ S DE YLG AW D + A F K++++ +
Sbjct: 981 LSTLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAWEDKDALD-AINRFQDKLEDISK 1039
Query: 853 IIDDRNSNENLKNRTGAAIVPYELLKPFSEPGATG 887
I R NENL+ VPY L P P T
Sbjct: 1040 KIKQR--NENLE-------VPYIYLLPERIPNGTA 1065
>pdb|3FG1|A Chain A, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|B Chain B, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|C Chain C, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|D Chain D, Crystal Structure Of Delta413-417:gs Lox
Length = 696
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 137/515 (26%), Positives = 234/515 (45%), Gaps = 68/515 (13%)
Query: 393 WLRDEEFGRETLAGLNPYGISLVADWPLKSTLDPETYGPTESAITKELIEKEIGGSMTVE 452
W D FG + L G NP ++ P + +T E + + ++
Sbjct: 229 WHEDRWFGYQFLNGANPVILTRCDALP------------SNFPVTNEHVNASLDRGKNLD 276
Query: 453 EAIKQKKLFIIDY--------------HDALLPYVEKVRQIKDTTLYGSR--TVFFLNPD 496
E IK ++I+D+ D + ++ + Y + +F++N
Sbjct: 277 EEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVNKL 336
Query: 497 GTLRPLAIELTRPPMDGKPQWKQVFTPSTGNSTESWLWRLAKAHVLAHDSGYHQLISHWL 556
G L P+AI++ + P P W TP N + W +AK + +S +HQL +H L
Sbjct: 337 GHLMPIAIQINQEPGPENPIW----TPHEENEHD---WMMAKFWLGVAESNFHQLNTHLL 389
Query: 557 RTHCCVEPYVIATNRRLSAMHPINRLLKPHFRYTMEINALARKVLINADGIFETNF-FPG 615
RTH E + ++T R L++ HPI +LL+PH + I+ + RK LI + GI + + G
Sbjct: 390 RTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELIGSGGIVDQSLSLGG 449
Query: 616 KYCMEFSSVIYDKHWRFDNEGLPKDLIRRGIAVEDPKAPHGLKLNIEDYPYANDGLDLWD 675
+ F + K + LP L +RG V+DP G + Y +DGL LW+
Sbjct: 450 GGHVTFMEKCF-KEVNLQDYHLPNALKKRG--VDDPSKLPG-------FYYRDDGLALWE 499
Query: 676 ALKQWVTNYVNHYYPDPSLVESDEELQAWWTEIRTVG---HAEKKDEPWWPVLKTPQDLI 732
A++ ++ + +Y + V+ D E+Q+W ++ G + +D ++ + L
Sbjct: 500 AIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGVPASFESREQLK 559
Query: 733 EIITTIAWVASGHHAAVNFGQYLYGGYFPNRPTVARTNLPNEDQTKEEWKSFLEKPEAAL 792
E++T++ + S HAAVNF Q + G+ PN P + R P K++ ++ L+ ++
Sbjct: 560 EVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPP-----KKKGEATLQ----SI 610
Query: 793 LRCFPAQFQALTVMLVIDLLSTHSPDEEYLGKEMEPAWGDDPVIKAAFEEFNLKMQELER 852
L P++ QA + + +L+ S DE YLG AW D + A F K++++ +
Sbjct: 611 LSTLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAWEDKDALD-AINRFQDKLEDISK 669
Query: 853 IIDDRNSNENLKNRTGAAIVPYELLKPFSEPGATG 887
I R NENL+ VPY L P P T
Sbjct: 670 KIKQR--NENLE-------VPYIYLLPERIPNGTA 695
>pdb|2FNQ|A Chain A, Insights From The X-Ray Crystal Structure Of Coral 8r-
Lipoxygenase: Calcium Activation Via A C2-Like Domain
And A Structural Basis Of Product Chirality
pdb|2FNQ|B Chain B, Insights From The X-Ray Crystal Structure Of Coral 8r-
Lipoxygenase: Calcium Activation Via A C2-Like Domain
And A Structural Basis Of Product Chirality
Length = 699
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 137/515 (26%), Positives = 234/515 (45%), Gaps = 68/515 (13%)
Query: 393 WLRDEEFGRETLAGLNPYGISLVADWPLKSTLDPETYGPTESAITKELIEKEIGGSMTVE 452
W D FG + L G NP ++ P + +T E + + ++
Sbjct: 232 WHEDRWFGYQFLNGANPVILTRCDALP------------SNFPVTNEHVNASLDRGKNLD 279
Query: 453 EAIKQKKLFIIDY--------------HDALLPYVEKVRQIKDTTLYGSR--TVFFLNPD 496
E IK ++I+D+ D + ++ + Y + +F++N
Sbjct: 280 EEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVNKL 339
Query: 497 GTLRPLAIELTRPPMDGKPQWKQVFTPSTGNSTESWLWRLAKAHVLAHDSGYHQLISHWL 556
G L P+AI++ + P P W TP N + W +AK + +S +HQL +H L
Sbjct: 340 GHLMPIAIQINQEPGPENPIW----TPHEENEHD---WMMAKFWLGVAESNFHQLNTHLL 392
Query: 557 RTHCCVEPYVIATNRRLSAMHPINRLLKPHFRYTMEINALARKVLINADGIFETNF-FPG 615
RTH E + ++T R L++ HP+ +LL+PH + I+ + RK LI + GI + + G
Sbjct: 393 RTHLTTESFALSTWRNLASAHPVFKLLQPHIYGVLAIDTIGRKELIGSGGIVDQSLSLGG 452
Query: 616 KYCMEFSSVIYDKHWRFDNEGLPKDLIRRGIAVEDPKAPHGLKLNIEDYPYANDGLDLWD 675
+ F + K + LP L +RG V+DP G + Y +DGL LW+
Sbjct: 453 GGHVTFMEKCF-KEVNLQDYHLPNALKKRG--VDDPSKLPG-------FYYRDDGLALWE 502
Query: 676 ALKQWVTNYVNHYYPDPSLVESDEELQAWWTEIRTVG---HAEKKDEPWWPVLKTPQDLI 732
A++ ++ + +Y + V+ D E+Q+W ++ G + +D ++ + L
Sbjct: 503 AIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGVPASFESREQLK 562
Query: 733 EIITTIAWVASGHHAAVNFGQYLYGGYFPNRPTVARTNLPNEDQTKEEWKSFLEKPEAAL 792
E++T++ + S HAAVNF Q + G+ PN P V R P K++ ++ L+ ++
Sbjct: 563 EVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAVLRHPPP-----KKKGEATLQ----SI 613
Query: 793 LRCFPAQFQALTVMLVIDLLSTHSPDEEYLGKEMEPAWGDDPVIKAAFEEFNLKMQELER 852
L P++ QA + + +L+ S DE YLG AW D + A F K++++ +
Sbjct: 614 LSTLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAWEDKDALD-AINRFQDKLEDISK 672
Query: 853 IIDDRNSNENLKNRTGAAIVPYELLKPFSEPGATG 887
I R NENL+ VPY L P P T
Sbjct: 673 KIKQR--NENLE-------VPYIYLLPERIPNGTA 698
>pdb|3O8Y|A Chain A, Stable-5-Lipoxygenase
pdb|3O8Y|B Chain B, Stable-5-Lipoxygenase
Length = 691
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 139/499 (27%), Positives = 223/499 (44%), Gaps = 56/499 (11%)
Query: 393 WLRDEEFGRETLAGLNPYGISLVADWPLKSTLDPETYGPTESAITKELIEKEIGGSMTVE 452
W D FG + L G NP I + P K +T E++E + +++E
Sbjct: 244 WQEDLMFGYQFLNGANPVLIRRCTELPEKL------------PVTTEMVECSLERQLSLE 291
Query: 453 EAIKQKKLFIIDYHDALLPYVEKVRQIKDTTLYGSRTVFFL--NPDGTLRPLAIELTRPP 510
+ ++Q +FI+D+ LL ++ + T + + + L N + P+AI+L + P
Sbjct: 292 QEVQQGNIFIVDFE--LLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIP 349
Query: 511 MDGKPQWKQVFTPSTGNSTESWLWRLAKAHVLAHDSGYHQLISHWLRTHCCVEPYVIATN 570
D P +F PS + W LAK V + D HQ I+H LRTH E + IA
Sbjct: 350 GDENP----IFLPSDAK----YDWLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMY 401
Query: 571 RRLSAMHPINRLLKPHFRYTMEINALARKVLINADGIFETNFFPGKYCMEFSSVIYDKHW 630
R+L A+HPI +LL H R+T+ IN AR+ LI G+F+ G H
Sbjct: 402 RQLPAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGG----------GGHV 451
Query: 631 RFDNEGLPKDLIRRGIAVEDPKAPHGL--KLNIEDYPYANDGLDLWDALKQWVTNYVNHY 688
+ + KDL + + G+ K +I Y Y +DGL +W+A++ + V+ Y
Sbjct: 452 QMVQRAM-KDLTYASLCFPEAIKARGMESKEDIPYYFYRDDGLLVWEAIRTFTAEVVDIY 510
Query: 689 YPDPSLVESDEELQAWWTEIRTVGHAEKKDEPWWPVLKTPQDLIEIITTIAWVASGHHAA 748
Y +VE D ELQ + ++ G +K + +K+ + L E +T + + AS HAA
Sbjct: 511 YEGDQVVEEDPELQDFVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAA 570
Query: 749 VNFGQYLYGGYFPNRPTVARTNLPNEDQTKEEWKSFLEKPEAALLRCFPAQFQALTVMLV 808
VNFGQY + + PN P R P +E+ ++ P + ++ +
Sbjct: 571 VNFGQYDWASWIPNAPPTMRAPPPTAKGVVT-----IEQ----IVDTLPDRGRSCWHLGA 621
Query: 809 IDLLSTHSPDEEYLGKEMEPAWGDDPVIKAAFEEFNLKMQELERIIDDRNSNENLKNRTG 868
+ LS +E +LG E + + PV K A F ++ + +I +RN N L
Sbjct: 622 VWALSQFQENELFLGMYPEEHFIEKPV-KEAMARFRKNLEAIVSVIAERNENLQL----- 675
Query: 869 AAIVPYELLKPFSEPGATG 887
PY L P P +
Sbjct: 676 ----PYYYLSPDRIPNSVA 690
>pdb|3V92|B Chain B, S663a Stable-5-Lox
pdb|3V92|A Chain A, S663a Stable-5-Lox
Length = 691
Score = 166 bits (419), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 139/499 (27%), Positives = 223/499 (44%), Gaps = 56/499 (11%)
Query: 393 WLRDEEFGRETLAGLNPYGISLVADWPLKSTLDPETYGPTESAITKELIEKEIGGSMTVE 452
W D FG + L G NP I + P K +T E++E + +++E
Sbjct: 244 WQEDLMFGYQFLNGANPVLIRRCTELPEKL------------PVTTEMVECSLERQLSLE 291
Query: 453 EAIKQKKLFIIDYHDALLPYVEKVRQIKDTTLYGSRTVFFL--NPDGTLRPLAIELTRPP 510
+ ++Q +FI+D+ LL ++ + T + + + L N + P+AI+L + P
Sbjct: 292 QEVQQGNIFIVDFE--LLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIP 349
Query: 511 MDGKPQWKQVFTPSTGNSTESWLWRLAKAHVLAHDSGYHQLISHWLRTHCCVEPYVIATN 570
D P +F PS + W LAK V + D HQ I+H LRTH E + IA
Sbjct: 350 GDENP----IFLPSDAK----YDWLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMY 401
Query: 571 RRLSAMHPINRLLKPHFRYTMEINALARKVLINADGIFETNFFPGKYCMEFSSVIYDKHW 630
R+L A+HPI +LL H R+T+ IN AR+ LI G+F+ G H
Sbjct: 402 RQLPAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGG----------GGHV 451
Query: 631 RFDNEGLPKDLIRRGIAVEDPKAPHGL--KLNIEDYPYANDGLDLWDALKQWVTNYVNHY 688
+ + KDL + + G+ K +I Y Y +DGL +W+A++ + V+ Y
Sbjct: 452 QMVQRAM-KDLTYASLCFPEAIKARGMESKEDIPYYFYRDDGLLVWEAIRTFTAEVVDIY 510
Query: 689 YPDPSLVESDEELQAWWTEIRTVGHAEKKDEPWWPVLKTPQDLIEIITTIAWVASGHHAA 748
Y +VE D ELQ + ++ G +K + +K+ + L E +T + + AS HAA
Sbjct: 511 YEGDQVVEEDPELQDFVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAA 570
Query: 749 VNFGQYLYGGYFPNRPTVARTNLPNEDQTKEEWKSFLEKPEAALLRCFPAQFQALTVMLV 808
VNFGQY + + PN P R P +E+ ++ P + ++ +
Sbjct: 571 VNFGQYDWASWIPNAPPTMRAPPPTAKGVVT-----IEQ----IVDTLPDRGRSCWHLGA 621
Query: 809 IDLLSTHSPDEEYLGKEMEPAWGDDPVIKAAFEEFNLKMQELERIIDDRNSNENLKNRTG 868
+ LS +E +LG E + + PV K A F ++ + +I +RN N L
Sbjct: 622 VWALSQFQENELFLGMYPEEHFIEKPV-KEAMARFRKNLEAIVSVIAERNENLQL----- 675
Query: 869 AAIVPYELLKPFSEPGATG 887
PY L P P +
Sbjct: 676 ----PYYYLAPDRIPNSVA 690
>pdb|3V98|A Chain A, S663d Stable-5-Lox
pdb|3V98|B Chain B, S663d Stable-5-Lox
pdb|3V99|A Chain A, S663d Stable-5-Lox In Complex With Arachidonic Acid
pdb|3V99|B Chain B, S663d Stable-5-Lox In Complex With Arachidonic Acid
Length = 691
Score = 166 bits (419), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 139/499 (27%), Positives = 223/499 (44%), Gaps = 56/499 (11%)
Query: 393 WLRDEEFGRETLAGLNPYGISLVADWPLKSTLDPETYGPTESAITKELIEKEIGGSMTVE 452
W D FG + L G NP I + P K +T E++E + +++E
Sbjct: 244 WQEDLMFGYQFLNGANPVLIRRCTELPEKL------------PVTTEMVECSLERQLSLE 291
Query: 453 EAIKQKKLFIIDYHDALLPYVEKVRQIKDTTLYGSRTVFFL--NPDGTLRPLAIELTRPP 510
+ ++Q +FI+D+ LL ++ + T + + + L N + P+AI+L + P
Sbjct: 292 QEVQQGNIFIVDFE--LLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIP 349
Query: 511 MDGKPQWKQVFTPSTGNSTESWLWRLAKAHVLAHDSGYHQLISHWLRTHCCVEPYVIATN 570
D P +F PS + W LAK V + D HQ I+H LRTH E + IA
Sbjct: 350 GDENP----IFLPSDAK----YDWLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMY 401
Query: 571 RRLSAMHPINRLLKPHFRYTMEINALARKVLINADGIFETNFFPGKYCMEFSSVIYDKHW 630
R+L A+HPI +LL H R+T+ IN AR+ LI G+F+ G H
Sbjct: 402 RQLPAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGG----------GGHV 451
Query: 631 RFDNEGLPKDLIRRGIAVEDPKAPHGL--KLNIEDYPYANDGLDLWDALKQWVTNYVNHY 688
+ + KDL + + G+ K +I Y Y +DGL +W+A++ + V+ Y
Sbjct: 452 QMVQRAM-KDLTYASLCFPEAIKARGMESKEDIPYYFYRDDGLLVWEAIRTFTAEVVDIY 510
Query: 689 YPDPSLVESDEELQAWWTEIRTVGHAEKKDEPWWPVLKTPQDLIEIITTIAWVASGHHAA 748
Y +VE D ELQ + ++ G +K + +K+ + L E +T + + AS HAA
Sbjct: 511 YEGDQVVEEDPELQDFVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAA 570
Query: 749 VNFGQYLYGGYFPNRPTVARTNLPNEDQTKEEWKSFLEKPEAALLRCFPAQFQALTVMLV 808
VNFGQY + + PN P R P +E+ ++ P + ++ +
Sbjct: 571 VNFGQYDWASWIPNAPPTMRAPPPTAKGVVT-----IEQ----IVDTLPDRGRSCWHLGA 621
Query: 809 IDLLSTHSPDEEYLGKEMEPAWGDDPVIKAAFEEFNLKMQELERIIDDRNSNENLKNRTG 868
+ LS +E +LG E + + PV K A F ++ + +I +RN N L
Sbjct: 622 VWALSQFQENELFLGMYPEEHFIEKPV-KEAMARFRKNLEAIVSVIAERNENLQL----- 675
Query: 869 AAIVPYELLKPFSEPGATG 887
PY L P P +
Sbjct: 676 ----PYYYLDPDRIPNSVA 690
>pdb|3FG4|A Chain A, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|B Chain B, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|C Chain C, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|D Chain D, Crystal Structure Of Delta413-417:gs I805a Lox
Length = 696
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 136/515 (26%), Positives = 233/515 (45%), Gaps = 68/515 (13%)
Query: 393 WLRDEEFGRETLAGLNPYGISLVADWPLKSTLDPETYGPTESAITKELIEKEIGGSMTVE 452
W D FG + L G NP ++ P + +T E + + ++
Sbjct: 229 WHEDRWFGYQFLNGANPVILTRCDALP------------SNFPVTNEHVNASLDRGKNLD 276
Query: 453 EAIKQKKLFIIDY--------------HDALLPYVEKVRQIKDTTLYGSR--TVFFLNPD 496
E IK ++I+D+ D + ++ + Y + +F++N
Sbjct: 277 EEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVNKL 336
Query: 497 GTLRPLAIELTRPPMDGKPQWKQVFTPSTGNSTESWLWRLAKAHVLAHDSGYHQLISHWL 556
G L P+AI++ + P P W TP N + W +AK + +S +HQL +H L
Sbjct: 337 GHLMPIAIQINQEPGPENPIW----TPHEENEHD---WMMAKFWLGVAESNFHQLNTHLL 389
Query: 557 RTHCCVEPYVIATNRRLSAMHPINRLLKPHFRYTMEINALARKVLINADGIFETNF-FPG 615
RTH E + ++T R L++ HPI +LL+PH + I+ + RK L + GI + + G
Sbjct: 390 RTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELAGSGGIVDQSLSLGG 449
Query: 616 KYCMEFSSVIYDKHWRFDNEGLPKDLIRRGIAVEDPKAPHGLKLNIEDYPYANDGLDLWD 675
+ F + K + LP L +RG V+DP G + Y +DGL LW+
Sbjct: 450 GGHVTFMEKCF-KEVNLQDYHLPNALKKRG--VDDPSKLPG-------FYYRDDGLALWE 499
Query: 676 ALKQWVTNYVNHYYPDPSLVESDEELQAWWTEIRTVG---HAEKKDEPWWPVLKTPQDLI 732
A++ ++ + +Y + V+ D E+Q+W ++ G + +D ++ + L
Sbjct: 500 AIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGVPASFESREQLK 559
Query: 733 EIITTIAWVASGHHAAVNFGQYLYGGYFPNRPTVARTNLPNEDQTKEEWKSFLEKPEAAL 792
E++T++ + S HAAVNF Q + G+ PN P + R P K++ ++ L+ ++
Sbjct: 560 EVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPP-----KKKGEATLQ----SI 610
Query: 793 LRCFPAQFQALTVMLVIDLLSTHSPDEEYLGKEMEPAWGDDPVIKAAFEEFNLKMQELER 852
L P++ QA + + +L+ S DE YLG AW D + A F K++++ +
Sbjct: 611 LSTLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAWEDKDALD-AINRFQDKLEDISK 669
Query: 853 IIDDRNSNENLKNRTGAAIVPYELLKPFSEPGATG 887
I R NENL+ VPY L P P T
Sbjct: 670 KIKQR--NENLE-------VPYIYLLPERIPNGTA 695
>pdb|3FG3|A Chain A, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|B Chain B, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|C Chain C, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|D Chain D, Crystal Structure Of Delta413-417:gs I805w Lox
Length = 696
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 136/515 (26%), Positives = 233/515 (45%), Gaps = 68/515 (13%)
Query: 393 WLRDEEFGRETLAGLNPYGISLVADWPLKSTLDPETYGPTESAITKELIEKEIGGSMTVE 452
W D FG + L G NP ++ P + +T E + + ++
Sbjct: 229 WHEDRWFGYQFLNGANPVILTRCDALP------------SNFPVTNEHVNASLDRGKNLD 276
Query: 453 EAIKQKKLFIIDY--------------HDALLPYVEKVRQIKDTTLYGSR--TVFFLNPD 496
E IK ++I+D+ D + ++ + Y + +F++N
Sbjct: 277 EEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVNKL 336
Query: 497 GTLRPLAIELTRPPMDGKPQWKQVFTPSTGNSTESWLWRLAKAHVLAHDSGYHQLISHWL 556
G L P+AI++ + P P W TP N + W +AK + +S +HQL +H L
Sbjct: 337 GHLMPIAIQINQEPGPENPIW----TPHEENEHD---WMMAKFWLGVAESNFHQLNTHLL 389
Query: 557 RTHCCVEPYVIATNRRLSAMHPINRLLKPHFRYTMEINALARKVLINADGIFETNF-FPG 615
RTH E + ++T R L++ HPI +LL+PH + I+ + RK L + GI + + G
Sbjct: 390 RTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELWGSGGIVDQSLSLGG 449
Query: 616 KYCMEFSSVIYDKHWRFDNEGLPKDLIRRGIAVEDPKAPHGLKLNIEDYPYANDGLDLWD 675
+ F + K + LP L +RG V+DP G + Y +DGL LW+
Sbjct: 450 GGHVTFMEKCF-KEVNLQDYHLPNALKKRG--VDDPSKLPG-------FYYRDDGLALWE 499
Query: 676 ALKQWVTNYVNHYYPDPSLVESDEELQAWWTEIRTVG---HAEKKDEPWWPVLKTPQDLI 732
A++ ++ + +Y + V+ D E+Q+W ++ G + +D ++ + L
Sbjct: 500 AIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGVPASFESREQLK 559
Query: 733 EIITTIAWVASGHHAAVNFGQYLYGGYFPNRPTVARTNLPNEDQTKEEWKSFLEKPEAAL 792
E++T++ + S HAAVNF Q + G+ PN P + R P K++ ++ L+ ++
Sbjct: 560 EVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPP-----KKKGEATLQ----SI 610
Query: 793 LRCFPAQFQALTVMLVIDLLSTHSPDEEYLGKEMEPAWGDDPVIKAAFEEFNLKMQELER 852
L P++ QA + + +L+ S DE YLG AW D + A F K++++ +
Sbjct: 611 LSTLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAWEDKDALD-AINRFQDKLEDISK 669
Query: 853 IIDDRNSNENLKNRTGAAIVPYELLKPFSEPGATG 887
I R NENL+ VPY L P P T
Sbjct: 670 KIKQR--NENLE-------VPYIYLLPERIPNGTA 695
>pdb|3RDE|A Chain A, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|B Chain B, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|C Chain C, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|D Chain D, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
Length = 573
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 145/498 (29%), Positives = 213/498 (42%), Gaps = 77/498 (15%)
Query: 393 WLRDEEFGRETLAGLNPYGISLVADWPLKSTLDPETYGPTESAITKELIEKEIGGSMTVE 452
W D FG + L G NP + + P + P G E + +EKE+ G
Sbjct: 133 WKEDALFGYQFLNGTNPMLLRHSVELPARLKFPP---GMEE---LQAQLEKELQGG---- 182
Query: 453 EAIKQKKLFIIDYHDALLPYVEKVRQIKDTTLYGS--RTVFFLNPDGTLRPLAIELTRPP 510
LF D+ +LL + K I + Y + + L PDG L P+ I+L + P
Sbjct: 183 ------TLFEADF--SLLDGI-KANVILSSQQYLAVPLVMLKLQPDGKLLPMVIQL-QLP 232
Query: 511 MDGKPQWKQVFTPSTGNSTESWLWRLAKAHVLAHDSGYHQLISHWLRTHCCVEPYVIATN 570
+G P +F P+ +W LAK V + D H+L SH LR H E +AT
Sbjct: 233 REGSP-LPPLFLPTD----PPMVWLLAKCWVRSSDFQLHELHSHLLRGHLMAEVIAVATM 287
Query: 571 RRLSAMHPINRLLKPHFRYTMEINALARKVLINADGIFETNFFPGKYCMEFSSVIYDKHW 630
R L ++HPI +LL PHFRYTMEIN AR L++ GIF+ G
Sbjct: 288 RCLPSIHPIFKLLIPHFRYTMEINVRARNGLVSDLGIFDQVVSTGG-------------- 333
Query: 631 RFDNEGLPKDLIRRGIAV--------EDPKAPHGLKLNIEDYPYANDGLDLWDALKQWVT 682
G +L+RR A+ D A GL L +E YA D L LW+ + ++V
Sbjct: 334 -----GGHVELLRRAAALLTYSSFCPPDDLADRGL-LGVESSFYAQDALRLWEVISRYVE 387
Query: 683 NYVNHYYPDPSLVESDEELQAWWTEIRTVGHAEKKDEPWWPVLKTPQDLIEIITTIAWVA 742
V+ +Y V+ D ELQAW E +G +D + L++ + L +T +
Sbjct: 388 GIVSLHYKTDESVKEDFELQAWCREFTEIGLLGAQDRGFPVSLQSKEQLCHFVTMCIFTC 447
Query: 743 SGHHAAVNFGQYLYGGYFPNRPTVARTNLP-NEDQTKEEWKSFLEKPEAALLRCFPAQFQ 801
+G H++ + GQ + + PN P R P +D T E ++ P Q
Sbjct: 448 TGQHSSNHLGQLDWYTWVPNAPCTMRLPPPTTKDATLE-----------TVMATLPNFHQ 496
Query: 802 ALTVMLVIDLLSTHSPDEEYLGKEMEPAWGDDPVIKAAFEEFNLKMQELERIIDDRNSNE 861
A M + L P LG+ E + P KA +F ++ L++ I+ RN+
Sbjct: 497 ASLQMSITWQLGRCQPTMVALGQH-EEEYFSGPGPKAVLTKFREELAALDKDIEVRNAKL 555
Query: 862 NLKNRTGAAIVPYELLKP 879
L PYE L+P
Sbjct: 556 AL---------PYEYLRP 564
>pdb|3D3L|A Chain A, The 2.6 A Crystal Structure Of The Lipoxygenase Domain Of
Human Arachidonate 12-Lipoxygenase, 12s-Type (Casp
Target)
pdb|3D3L|B Chain B, The 2.6 A Crystal Structure Of The Lipoxygenase Domain Of
Human Arachidonate 12-Lipoxygenase, 12s-Type (Casp
Target)
Length = 541
Score = 145 bits (367), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 138/488 (28%), Positives = 203/488 (41%), Gaps = 56/488 (11%)
Query: 393 WLRDEEFGRETLAGLNPYGISLVADWPLKSTLDPETYGPTESAITKELIEKEIGGSMTVE 452
W DE F + L G NP + P + L P+ + +EKE+
Sbjct: 68 WQDDELFSYQFLNGANPMLLRRSTSLPSRLVL------PSGMEELRAQLEKEL------- 114
Query: 453 EAIKQKKLFIIDYHDALLPYV-EKVRQIKDTTLYGSRTVFFLNPDGTLRPLAIELTRPPM 511
+ LF D+ LL + V + + L + + P+G L+P+ I++ P
Sbjct: 115 ---QNGSLFEADF--ILLDGIPANVIRGEKQYLAAPLVMLKMEPNGKLQPMVIQIQPPNP 169
Query: 512 DGKPQWKQVFTPSTGNSTESWLWRLAKAHVLAHDSGYHQLISHWLRTHCCVEPYVIATNR 571
+F PS + +WL LAK+ V D H++ H L TH E +AT R
Sbjct: 170 SSPT--PTLFLPS--DPPLAWL--LAKSWVRNSDFQLHEIQYHLLNTHLVAEVIAVATMR 223
Query: 572 RLSAMHPINRLLKPHFRYTMEINALARKVLINADGIFETNFFPGKYCMEFSSVIYDKHWR 631
L +HPI + L PH RYTMEIN AR LI+ GIF+ G
Sbjct: 224 CLPGLHPIFKFLIPHIRYTMEINTRARTQLISDGGIFDKAVSTGGGGHVQLLRRAAAQLT 283
Query: 632 FDNEGLPKDLIRRGIAVEDPKAPHGLKLNIEDYPYANDGLDLWDALKQWVTNYVNHYYPD 691
+ + P DL RG+ L + YA+D L LW+ + ++V V+ +Y
Sbjct: 284 YCSLCPPDDLADRGL------------LGLPGALYAHDALRLWEIIARYVEGIVHLFYQR 331
Query: 692 PSLVESDEELQAWWTEIRTVGHAEKKDEPWWPVLKTPQDLIEIITTIAWVASGHHAAVNF 751
+V+ D ELQAW EI VG + +D + ++ L +T + + HAA+N
Sbjct: 332 DDIVKGDPELQAWCREITEVGLCQAQDRGFPVSFQSQSQLCHFLTMCVFTCTAQHAAINQ 391
Query: 752 GQYLYGGYFPNRPTVARTNLPNEDQTKEEWKSFLEKPEAALLRCFPAQFQALTVMLVIDL 811
GQ + + PN P R P TKE+ A ++ P QA M +
Sbjct: 392 GQLDWYAWVPNAPCTMRMPPPT---TKEDVTM------ATVMGSLPDVRQACLQMAISWH 442
Query: 812 LSTHSPDEEYLGKEMEPAWGDDPVIKAAFEEFNLKMQELERIIDDRNSNENLKNRTGAAI 871
LS PD LG E + P KA +F +++LE+ I RN +
Sbjct: 443 LSRRQPDMVPLGHHKE-KYFSGPKPKAVLNQFRTDLEKLEKEITARNEQLDW-------- 493
Query: 872 VPYELLKP 879
PYE LKP
Sbjct: 494 -PYEYLKP 500
>pdb|2P0M|A Chain A, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase
pdb|2P0M|B Chain B, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase
Length = 662
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 132/495 (26%), Positives = 207/495 (41%), Gaps = 59/495 (11%)
Query: 387 KRDKLFWLRDEEFGRETLAGLNPYGISLVADWPLKSTLDPETYGPTESAITKELIEKEIG 446
+R + W D FG + L G NP + P + P +EL
Sbjct: 216 RRVRDSWQEDSLFGYQFLNGANPMLLRRSVQLPARLVFPPGM---------EEL------ 260
Query: 447 GSMTVEEAIKQKKLFIIDYHDALLPYVE-KVRQIKDTTLYGSRTVFFLNPDGTLRPLAIE 505
+E+ +K LF D+ ALL ++ V L + L PDG L P+ I+
Sbjct: 261 -QAQLEKELKAGTLFEADF--ALLDNIKANVILYCQQYLAAPLVMLKLQPDGKLMPMVIQ 317
Query: 506 LTRPPMDGKPQWKQVFTPSTGNSTESWLWRLAKAHVLAHDSGYHQLISHWLRTHCCVEPY 565
L P + P +F P+ +W LAK V + D H+L SH LR H E +
Sbjct: 318 LHLPKIGSSP--PPLFLPTD----PPMVWLLAKCWVRSSDFQVHELNSHLLRGHLMAEVF 371
Query: 566 VIATNRRLSAMHPINRLLKPHFRYTMEINALARKVLINADGIFETNFFPGKYCMEFSSVI 625
+AT R L ++HP+ +L+ PH RYT+EIN AR L++ GIF+ G
Sbjct: 372 TVATMRCLPSIHPVFKLIVPHLRYTLEINVRARNGLVSDFGIFDQIMSTGG--------- 422
Query: 626 YDKHWRFDNEGLPKDLIRRGIAVEDPKAPHGLKLNIEDYPYANDGLDLWDALKQWVTNYV 685
H + + L R D A GL L +E YA D L LW+ + ++V +
Sbjct: 423 -GGHVQLLQQA-GAFLTYRSFCPPDDLADRGL-LGVESSFYAQDALRLWEIISRYVQGIM 479
Query: 686 NHYYPDPSLVESDEELQAWWTEIRTVGHAEKKDEPWWPVLKTPQDLIEIITTIAWVASGH 745
YY V D ELQ+W EI +G + + + L++ +T + +G
Sbjct: 480 GLYYKTDEAVRDDLELQSWCREITEIGLQGAQKQGFPTSLQSVAQACHFVTMCIFTCTGQ 539
Query: 746 HAAVNFGQYLYGGYFPNRPTVARTNLP-NEDQTKEEWKSFLEKPEAALLRCFPAQFQALT 804
H++++ GQ + + PN P R P +D T E ++ P Q+
Sbjct: 540 HSSIHLGQLDWFTWVPNAPCTMRLPPPTTKDATLE-----------TVMATLPNLHQSSL 588
Query: 805 VMLVIDLLSTHSPDEEYLGKEMEPAWGDDPVIKAAFEEFNLKMQELERIIDDRNSNENLK 864
M ++ L P LG+ E + P +A E+F ++ +++ I+ RN +
Sbjct: 589 QMSIVWQLGRDQPIMVPLGQHQE-EYFSGPEPRAVLEKFREELAIMDKEIEVRNEKLD-- 645
Query: 865 NRTGAAIVPYELLKP 879
+PYE L+P
Sbjct: 646 -------IPYEYLRP 653
>pdb|1LOX|A Chain A, Rabbit Reticulocyte 15-Lipoxygenase
Length = 662
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 132/495 (26%), Positives = 208/495 (42%), Gaps = 59/495 (11%)
Query: 387 KRDKLFWLRDEEFGRETLAGLNPYGISLVADWPLKSTLDPETYGPTESAITKELIEKEIG 446
+R + W D FG + L G NP + P + P +EL
Sbjct: 216 RRVRDSWQEDSLFGYQFLNGANPMLLRRSVQLPARLVFPPGM---------EEL------ 260
Query: 447 GSMTVEEAIKQKKLFIIDYHDALLPYVE-KVRQIKDTTLYGSRTVFFLNPDGTLRPLAIE 505
+E+ +K LF D+ ALL ++ V L + L PDG L P+ I+
Sbjct: 261 -QAQLEKELKAGTLFEADF--ALLDNIKANVILYCQQYLAAPLVMLKLQPDGKLMPMVIQ 317
Query: 506 LTRPPMDGKPQWKQVFTPSTGNSTESWLWRLAKAHVLAHDSGYHQLISHWLRTHCCVEPY 565
L P + P +F P+ +W LAK V + D H+L SH LR H E +
Sbjct: 318 LHLPKIGSSP--PPLFLPTD----PPMVWLLAKCWVRSSDFQVHELNSHLLRGHLMAEVF 371
Query: 566 VIATNRRLSAMHPINRLLKPHFRYTMEINALARKVLINADGIFETNFFPGKYCMEFSSVI 625
+AT R L ++HP+ +L+ PH RYT+EIN AR L++ GIF+ + S
Sbjct: 372 TVATMRCLPSIHPVFKLIVPHLRYTLEINVRARNGLVSDFGIFD----------QIMSTG 421
Query: 626 YDKHWRFDNEGLPKDLIRRGIAVEDPKAPHGLKLNIEDYPYANDGLDLWDALKQWVTNYV 685
H + + L R D A GL L +E YA D L LW+ + ++V +
Sbjct: 422 GGGHVQLLQQA-GAFLTYRSFCPPDDLADRGL-LGVESSFYAQDALRLWEIISRYVQGIM 479
Query: 686 NHYYPDPSLVESDEELQAWWTEIRTVGHAEKKDEPWWPVLKTPQDLIEIITTIAWVASGH 745
YY V D ELQ+W EI +G + + + L++ +T + +G
Sbjct: 480 GLYYKTDEAVRDDLELQSWCREITEIGLQGAQKQGFPTSLQSVAQACHFVTMCIFTCTGQ 539
Query: 746 HAAVNFGQYLYGGYFPNRPTVARTNLP-NEDQTKEEWKSFLEKPEAALLRCFPAQFQALT 804
H++++ GQ + + PN P R P +D T E ++ P Q+
Sbjct: 540 HSSIHLGQLDWFTWVPNAPCTMRLPPPTTKDATLE-----------TVMATLPNLKQSSL 588
Query: 805 VMLVIDLLSTHSPDEEYLGKEMEPAWGDDPVIKAAFEEFNLKMQELERIIDDRNSNENLK 864
M ++ L P LG+ E + P +A E+F ++ +++ I+ RN +
Sbjct: 589 QMSIVWQLGRDQPIMVPLGQHQE-EYFSGPEPRAVLEKFREELAIMDKEIEVRNEKLD-- 645
Query: 865 NRTGAAIVPYELLKP 879
+PYE L+P
Sbjct: 646 -------IPYEYLRP 653
>pdb|3DS0|A Chain A, Hiv-1 Capsid C-Terminal Domain Mutant (N183a) In Complex
With An Inhibitor Of Particle Assembly (Cai)
pdb|3DS5|A Chain A, Hiv-1 Capsid C-Terminal Domain Mutant (N183a)
pdb|3DS5|B Chain B, Hiv-1 Capsid C-Terminal Domain Mutant (N183a)
pdb|3DS5|C Chain C, Hiv-1 Capsid C-Terminal Domain Mutant (N183a)
pdb|3DS5|D Chain D, Hiv-1 Capsid C-Terminal Domain Mutant (N183a)
Length = 86
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 671 LDLWDALKQWVTNYVNHYYPDPSLVESDEELQAWWTEIRTVGHAEKKDEPWWPVLKTPQD 730
LD+ K+ +YV+ +Y ++ +E++AW TE V +A + L
Sbjct: 6 LDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKAWMTETLLVQNANPDCKTILKALGPGAT 65
Query: 731 LIEIITTIAWVAS-GHHAAV 749
L E++T V GH A V
Sbjct: 66 LEEMMTACQGVGGPGHKARV 85
>pdb|4DZH|A Chain A, Crystal Structure Of An Adenosine Deaminase From
Xanthomonas Campestris (Target Nysgrc-200456) With Bound
Zn
Length = 472
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 800 FQALTVMLVIDLLST-HSPDEEYLGK--EMEPAWGDDPVIKAAF 840
F+AL ++ID + S D+EY + E+ W DDP+I AF
Sbjct: 155 FRALVGAVIIDFPTAWASSDDEYFARAGELHDQWRDDPLISTAF 198
>pdb|2B8E|A Chain A, Copa Atp Binding Domain
pdb|2B8E|B Chain B, Copa Atp Binding Domain
pdb|2B8E|C Chain C, Copa Atp Binding Domain
Length = 273
Score = 30.0 bits (66), Expect = 6.6, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Query: 133 KTEFDVPSNFGEVGAILVEADQLTETF---LKDIALDGLRNGPVNIACDSWIQPKIVDKQ 189
KT V N G V I+ +D L E+ ++++ G++ G I D+W + + ++
Sbjct: 123 KTAVIVARN-GRVEGIIAVSDTLKESAKPAVQELKRXGIKVG--XITGDNWRSAEAISRE 179
Query: 190 KRIFFTNKSYLPSQTPNGLARLRAEELNNLQGDG 223
+ LP Q + +L+A+E+ GDG
Sbjct: 180 LNLDLVIAEVLPHQKSEEVKKLQAKEVVAFVGDG 213
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.136 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,197,295
Number of Sequences: 62578
Number of extensions: 1400831
Number of successful extensions: 3587
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 3397
Number of HSP's gapped (non-prelim): 43
length of query: 896
length of database: 14,973,337
effective HSP length: 108
effective length of query: 788
effective length of database: 8,214,913
effective search space: 6473351444
effective search space used: 6473351444
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)