Query 002649
Match_columns 896
No_of_seqs 294 out of 677
Neff 5.2
Searched_HMMs 46136
Date Fri Mar 29 04:17:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002649.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002649hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02305 lipoxygenase 100.0 1E-265 3E-270 2289.8 72.1 825 56-896 83-918 (918)
2 PLN02264 lipoxygenase 100.0 2E-263 5E-268 2271.4 69.1 825 55-896 85-919 (919)
3 PLN02337 lipoxygenase 100.0 2E-259 5E-264 2245.7 70.8 825 56-896 20-866 (866)
4 PF00305 Lipoxygenase: Lipoxyg 100.0 1E-204 2E-209 1782.4 34.5 663 205-880 1-667 (667)
5 cd01751 PLAT_LH2 PLAT/ LH2 dom 100.0 1.4E-35 3.1E-40 288.3 13.6 130 56-196 2-137 (137)
6 smart00308 LH2 Lipoxygenase ho 99.2 1.7E-10 3.6E-15 107.3 10.5 82 93-183 20-104 (105)
7 PF01477 PLAT: PLAT/LH2 domain 98.8 1.7E-08 3.7E-13 94.2 7.9 64 131-194 46-113 (113)
8 cd00113 PLAT PLAT (Polycystin- 98.5 2.7E-07 5.9E-12 87.2 8.4 64 131-194 49-116 (116)
9 cd02899 PLAT_SR Scavenger rece 98.3 3.6E-06 7.9E-11 80.0 9.0 77 93-183 20-98 (109)
10 cd01753 PLAT_LOX PLAT domain o 97.8 0.00011 2.3E-09 70.4 9.8 83 93-185 20-106 (113)
11 cd01757 PLAT_RAB6IP1 PLAT/LH2 97.8 7.1E-05 1.5E-09 71.8 8.0 47 140-186 50-100 (114)
12 cd01756 PLAT_repeat PLAT/LH2 d 97.8 0.00025 5.5E-09 68.1 11.7 94 93-194 20-118 (120)
13 cd01752 PLAT_polycystin PLAT/L 97.6 0.00048 1E-08 66.3 10.6 85 93-185 20-108 (120)
14 cd01754 PLAT_plant_stress PLAT 97.3 0.0008 1.7E-08 66.0 8.1 55 130-186 58-119 (129)
15 cd01755 PLAT_lipase PLAT/ LH2 45.8 86 0.0019 30.4 7.6 50 130-179 46-105 (120)
16 KOG2080 Uncharacterized conser 40.5 14 0.00029 46.3 1.4 52 133-185 1014-1069(1295)
17 PF07157 DNA_circ_N: DNA circu 31.1 14 0.00031 34.7 -0.4 69 644-725 11-89 (93)
18 PF10474 DUF2451: Protein of u 25.8 43 0.00093 36.4 2.1 24 678-707 178-201 (234)
19 PF10281 Ish1: Putative stress 24.7 1.1E+02 0.0025 23.7 3.7 31 697-736 5-35 (38)
20 PF12588 PSDC: Phophatidylseri 20.6 1.5E+02 0.0033 30.0 4.6 49 693-742 10-59 (141)
No 1
>PLN02305 lipoxygenase
Probab=100.00 E-value=1.3e-265 Score=2289.83 Aligned_cols=825 Identities=49% Similarity=0.914 Sum_probs=788.6
Q ss_pred ceeeEEEEeecceeEeeeeEeeccccCCchhhhhccc-cEEEEEEecccCCCCCCcc---cccccccccCCCCCCCCcee
Q 002649 56 SIKAIFNLTAEKSTKVKAVITVKPIVSDPLAVEKLIG-TLVLELVSAELDPETGKEK---PTIKSRAHRSLFTDDDGNLK 131 (896)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g-~~~l~lvs~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 131 (896)
++||+|++|++++++++++.+ ++ +|+++|++| +|+|||||++++|+||+|| ++|++|+++. ...+++ ++
T Consensus 83 ~i~~~v~~~~~~~~~~~~~~~---~~--~d~~~~~~g~~v~lqLvS~~~~~~~g~gk~~~~~l~~~~~~~-~~~~~~-~~ 155 (918)
T PLN02305 83 DVRAVITIRKKIKEKITEKFE---DQ--WEYFMNGIGQGILIQLVSEEIDPVTGSGKSVESSVRGWLPKP-SNDPHI-VE 155 (918)
T ss_pred eEEEEEEEEeecccchhhccc---ch--hhHHHHhhCCeEEEEEEeccccCCCCCcccccchhhccccCC-CCCCCc-eE
Confidence 599999999999999988665 44 899999999 9999999999999999655 8999999873 332444 69
Q ss_pred EEEEEecCCCCCceeEEEEEeCCCCCeeEeEEEEeccCCCcEEEecCCcccCCCCCCcceEEeeCcccccCCCChHhHHH
Q 002649 132 YKTEFDVPSNFGEVGAILVEADQLTETFLKDIALDGLRNGPVNIACDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLARL 211 (896)
Q Consensus 132 y~v~f~~~~~~G~pgai~v~n~~~~e~fl~~i~l~~~p~g~~~F~c~sWv~~~~~~~~~riff~n~~yLp~~tp~~L~~~ 211 (896)
|+++|+|+++||+||||+|+|.|++||||++|+|+++|+|+|||+||||||+.++|+.+||||+||+|||++||++|++|
T Consensus 156 ~~~~f~~~~~fG~pGA~~v~N~h~~ef~l~~i~l~~~p~g~v~f~cnSWv~~~~~~~~~RiFF~nk~ylP~~tP~~l~~~ 235 (918)
T PLN02305 156 YAADFTVPFDFGKPGAVLVTNLHGKEFYLMEIVIHGFDDGPIFFPANTWIHSRKDNPESRIIFRNQAYLPSQTPPGIKDL 235 (918)
T ss_pred EEEEEeeccccCCcceEEEEeCCCceEEEEEEEEecCCCCeEEEeccCccccCCCCCCCceEecCCCcCcccCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhCCCCCcccccCeeeecccccCCCCCCccCCCCCccccCCCCCCCCCCccCCCCCCCCCCCCCCCccC---C
Q 002649 212 RAEELNNLQGDGQGERKIHERIYDYDVYNDLGMPDSILKSDLVRPVLGGKEHPYPRRCRTGHPKSSKDPASESWSL---S 288 (896)
Q Consensus 212 R~~EL~~lrg~g~g~r~~~driYdy~~yndlG~Pd~~~~~~~~rpvlgg~~~pyprr~rtgr~~~~~dp~~e~~~~---~ 288 (896)
||+||++|||||+||||+||||||||||||||+||+ +++++||||||++|||||||||||+||++||.+|||.. .
T Consensus 236 Re~eL~~lRGdg~Gerk~~dRiYdYd~YNDLG~Pd~--~~~~~RpvLGG~~~PYPRR~RTGR~~t~~Dp~~Esr~~~~~~ 313 (918)
T PLN02305 236 RREDLLSLRGNGKGERKPHDRIYDYAPYNDLGNPDK--DEDLARPVLGGEEWPYPRRCRTGRPPTKKDPLCESRIEKPHP 313 (918)
T ss_pred HHHHHHHhcCCCCCcCCccccccchhhhccCCCCCC--CccccCcccCCCCCCCCCcCcCCCCCCCCCCcccccccCCCC
Confidence 999999999999999999999999999999999999 99999999999779999999999999999999999954 4
Q ss_pred CccCCCCCCChhhhcchhhchhHHHHhhhhhhHHHHhhcCCCCCCCCHHHHHHHhccCCCCCCccccccccccc-ch-hh
Q 002649 289 VYVPRDEAFSLLKTAQFSATGVYSALHAVIPFVESILRIGKDKGFPSLEAIDKLFNEGVELPPEIEKLPSWLKI-LP-NF 366 (896)
Q Consensus 289 ~yvPrDe~f~~~K~~~f~~~~~~~~~~~~~p~l~~~~~~~~~~~f~sf~di~~ly~~~~~~~~~~~~~~~~~~~-~~-~~ 366 (896)
+||||||+|+++|++||+++++||++|.++|.|+++++ .+.++|++|+||++||++|+++| .... +.++.+ +| .+
T Consensus 314 ~YvPrDE~f~~~K~~~f~~~~lk~~~~~~~p~~~~~~~-~~~~~F~~f~~i~~Ly~~g~~l~-~~~~-~~~~~~p~~~~~ 390 (918)
T PLN02305 314 VYVPRDETFEEIKRNTFSAGRLKALLHNLIPSIAAALS-SSDIPFTCFSDIDKLYNDGILLK-TEEP-KDIGLNPFLGNF 390 (918)
T ss_pred cCCCCCCCcccchhhhHHHHHHHHHHHhhhhHHHHhcC-CCCCCCCCHHHHHHHhccCCcCC-chhh-hhhhcCCchHHH
Confidence 79999999999999999999999999999999999998 78999999999999999999999 3211 222233 43 45
Q ss_pred hhhhcccCcccccccCchhcccccccccccHHHHHHHhhCCCccccccccCCCCCCCCCCCCCCCCCccccHHHHHHhhC
Q 002649 367 FKSIANTGKDILRFETPETLKRDKLFWLRDEEFGRETLAGLNPYGISLVADWPLKSTLDPETYGPTESAITKELIEKEIG 446 (896)
Q Consensus 367 ~~~~~~~~~~~l~fp~P~~~~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~s~ld~~~yg~~~s~IT~e~i~~~l~ 446 (896)
.+.++++++.+||||+|+||++|+++|++|+|||||+|||+||++|+||++||++|+|||++||+++|+||+|||+..|+
T Consensus 391 ~~~i~~~~~~~lkf~~P~vi~~d~~~W~~DeeFaRQ~LaGvNP~~I~rl~efP~~skldp~~yG~~~s~iT~e~ve~~L~ 470 (918)
T PLN02305 391 MKQVLSVSERLLKYDIPAVIKRDRFAWLRDNEFARQALAGVNPVNIEILKEFPILSKLDPAVYGPPESALTEELIERELE 470 (918)
T ss_pred HHHhhhcccccccCCCcceeecccccccChHHHHHHHHcCCCChheeeccccCCccccCccccCCcCCCcCHHHHHhhcC
Confidence 55558889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccHHHHHhcCcEEEeecccccccchhcccCCCCccccccceEEeeCCCCceeeEEEEecCCCCCCCCCCceeeeCCCC
Q 002649 447 GSMTVEEAIKQKKLFIIDYHDALLPYVEKVRQIKDTTLYGSRTVFFLNPDGTLRPLAIELTRPPMDGKPQWKQVFTPSTG 526 (896)
Q Consensus 447 g~~tl~~al~~grLFi~Dy~d~~lp~l~~in~~~g~~~yA~~~Lffl~~dG~L~PlAIqL~~p~~~~~~~~~~VfTP~d~ 526 (896)
| +||+|||++|||||+||||++|||+.++|.++++++|||+||||++++|+|+||||||+++++++++.+++||||++
T Consensus 471 G-~TleeAl~~~rLFIlDy~dl~lp~l~~in~l~~~~~YAprtLffL~~dG~L~PlAIqL~~~p~~~~p~~~~VftP~~- 548 (918)
T PLN02305 471 G-MTVEKAIEEKRLFILDYHDMLLPFIEKMNSLPERKAYASRTVFFYSKAGALRPIAIELSLPPTPSSPGNKFVYTHGH- 548 (918)
T ss_pred C-CcHHHHHHcCCEEEEechhhhCcccccccccCCcccccceeEEEECCCCCEeeEEEEeeCCCCCCCCCcceeeCCCC-
Confidence 8 99999999999999999999999999999999999999999999999999999999999998877777789999987
Q ss_pred CCCCchHHHHHHHHHHhhhhhhhHHHHhhhhcccchhhHHHHHhcccCCcCchhhhcccchhhhccchHHHHhcccCCCc
Q 002649 527 NSTESWLWRLAKAHVLAHDSGYHQLISHWLRTHCCVEPYVIATNRRLSAMHPINRLLKPHFRYTMEINALARKVLINADG 606 (896)
Q Consensus 527 ~~~~~~~W~LAK~~v~~aD~~~HqlvsHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~~gG 606 (896)
+++++|.|+||||||++||++|||+|+||++||+||||||||||||||.+|||||||+||||+||+||++||++|||+||
T Consensus 549 d~~~~w~W~LAK~~V~~aD~~~HQlisHlLrTHlv~EpfiIAT~RqLs~~HPI~kLL~PHfr~TL~INalAR~~LIn~gG 628 (918)
T PLN02305 549 DATTHWIWKLAKAHVCSNDAGVHQLVNHWLRTHACMEPYIIATHRQLSAMHPIYKLLHPHMRYTLEINALARQSLINGGG 628 (918)
T ss_pred CCCCchHHHHHHHHHHhccHHHHHHHHHHhhHHHHHHHHHHHHhccCCccCCHHHHHHHHHHHHHHHHHHHHHhccCCCC
Confidence 67789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCchHHHHHHHHHHhccCCCCCCCCchHHHhcCCCCCCCCCCCccccCcCCCCcchhhHHHHHHHHHHHHHhcc
Q 002649 607 IFETNFFPGKYCMEFSSVIYDKHWRFDNEGLPKDLIRRGIAVEDPKAPHGLKLNIEDYPYANDGLDLWDALKQWVTNYVN 686 (896)
Q Consensus 607 iie~~f~~G~~~~elss~~Y~~~w~F~~~~LP~DL~~RGva~~D~~~~hgl~l~l~dYpYrdDGL~IW~AI~~~V~~yv~ 686 (896)
++|++|++|+|+|||++++|++.|+|++++||+||++|||+++|+++|||++|.|||||||+|||+||+||++||++||+
T Consensus 629 iie~~fspg~~~~elss~aYk~~w~Fd~~~LP~DL~kRGva~~D~~~p~gl~l~ipdYPYrdDGL~IW~AIk~wV~~yV~ 708 (918)
T PLN02305 629 IIEACFSPGKYAMELSSAAYKSMWRFDMEALPADLIRRGMAEEDPSMPCGVRLVIEDYPYAADGLLIWSAIKEWVESYVD 708 (918)
T ss_pred ceeeeeccchhHHHHHHHHHHhcCcCccccCHHHHHHcCCCccCCCCcccccccCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccCcHHHHHHHHHHHhcccCCCCCCCCCCCCCChhHHHHHHhhhhccccccccccccccceeccccCCcccc
Q 002649 687 HYYPDPSLVESDEELQAWWTEIRTVGHAEKKDEPWWPVLKTPQDLIEIITTIAWVASGHHAAVNFGQYLYGGYFPNRPTV 766 (896)
Q Consensus 687 ~YY~~D~~V~~D~ELQaW~~Ei~~~G~~d~kd~p~~P~l~T~~~Li~~lT~iI~~aSaqHAAVNfgQy~y~gfvPN~P~~ 766 (896)
+||++|++|++|.|||+||+||+++||+|+++.+|||+|+|+++||++||+|||+|||||||||||||+|+||+||+|++
T Consensus 709 ~YY~~D~~V~~D~ELQaW~~Ei~~~Gh~d~kd~~~~p~l~T~~eLi~~lT~IIwtaSaqHAAVNFgQydy~gfvPN~P~~ 788 (918)
T PLN02305 709 HFYSEPNSITSDLELQAWWDEIKNKGHYDKRNEPWWPKLNTKEDLSGILTTMIWIASGQHAAINFGQYPFGGYVPNRPTL 788 (918)
T ss_pred hhCCChhhhccCHHHHHHHHHHHhcCCCCCCCCCCCcCCcCHHHHHHHHHhhhhhcchhhhhhhcCCcccccccCCCchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCChhHHHhhhhchHHHHHhcCCChHHHHHHHHHHHHhcCCCCCCccccCCCCC--CCCCcHHHHHHHHHHH
Q 002649 767 ARTNLPNEDQTKEEWKSFLEKPEAALLRCFPAQFQALTVMLVIDLLSTHSPDEEYLGKEMEP--AWGDDPVIKAAFEEFN 844 (896)
Q Consensus 767 ~r~p~P~~kkg~~e~~~~~~~pe~~~L~tlP~~~qa~~~m~~~~~LS~h~~de~yLG~~~~~--~~~~d~~~~~a~~~F~ 844 (896)
||++||++ +..+|++|+.+||++||++||++.||+.+|+++++||+|++||+|||++.++ .|+.|+++++||++|+
T Consensus 789 ~Rrp~P~~--~~~~~~~l~~~pe~~~L~tLP~~~qa~~~mav~~iLS~hs~de~yLG~~~~~~~~w~~D~~~~~A~~rF~ 866 (918)
T PLN02305 789 MRKLIPQE--NDPDYEKFIRNPQYTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGELRHLHSHWINDHEVVKLFNKFS 866 (918)
T ss_pred hcCCCCCC--CCchHHHhhhChHHHHHHHCCcHHHHHHHHHHHHHhccCCCCcccccCCCCcccccccCHHHHHHHHHHH
Confidence 99999988 6778999999999999999999999999999999999999999999999876 7999999999999999
Q ss_pred HHHHHHHHHHHhhcCCccccccCCCccCCceeecCCCCCCCCcCCCCccccC
Q 002649 845 LKMQELERIIDDRNSNENLKNRTGAAIVPYELLKPFSEPGATGKGVPYSISI 896 (896)
Q Consensus 845 ~~L~~Ie~~I~~RN~~~~lknr~g~~~~PY~~L~Pss~~g~t~~gIPnSIsI 896 (896)
++|++||++|++||++++||||+||+++||+||+|+++||||||||||||||
T Consensus 867 ~~L~eIE~~I~~RN~~~~lkNR~G~~~~PY~lL~P~s~~G~T~rgIPNSISI 918 (918)
T PLN02305 867 ARLEEIEKTINERNKDIRLKNRNGAGIPPYELLLPTSGPGVTGRGIPNSISI 918 (918)
T ss_pred HHHHHHHHHHHHHhCCccccccCCCCCCCccccCCCCCCCCCcCCCCCcccC
Confidence 9999999999999999999999999999999999999999999999999998
No 2
>PLN02264 lipoxygenase
Probab=100.00 E-value=2.1e-263 Score=2271.36 Aligned_cols=825 Identities=47% Similarity=0.887 Sum_probs=786.2
Q ss_pred CceeeEEEEeecceeEeeeeEeeccccCCchhhhhccc-cEEEEEEecccCCCCCCcc----cccccccccCCCCCCCCc
Q 002649 55 NSIKAIFNLTAEKSTKVKAVITVKPIVSDPLAVEKLIG-TLVLELVSAELDPETGKEK----PTIKSRAHRSLFTDDDGN 129 (896)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g-~~~l~lvs~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 129 (896)
.+++|+|++|++++++++++.+ ++ +|+++|++| +|+|||||++++|+||+|+ ++|++|+++ ....+++
T Consensus 85 ~~i~~~v~~~~~~~~~~~~~~~---~~--~D~~~~~~G~~v~lqLVSs~~~~~tg~~~~~~~a~l~~~~~~-~~~~~~~- 157 (919)
T PLN02264 85 FKVRAVVTVRNKNKEDLKETLV---KH--LDAFTDKIGRNVVLELISTQVDPKTKEPKKSKAAVLKDWSKK-SNIKAER- 157 (919)
T ss_pred EEEEEEEEEEeccccchhhccc---ch--hhHHHHHhCCeEEEEEEeccccCCCCCccCCCcchhcccccC-CCCCCCc-
Confidence 3589999999999998888665 44 899999999 9999999999999998433 999999987 3334555
Q ss_pred eeEEEEEecCCCCCceeEEEEEeCCCCCeeEeEEEEeccCCCcEEEecCCcccCCCCCCcceEEeeCcccccCCCChHhH
Q 002649 130 LKYKTEFDVPSNFGEVGAILVEADQLTETFLKDIALDGLRNGPVNIACDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLA 209 (896)
Q Consensus 130 ~~y~v~f~~~~~~G~pgai~v~n~~~~e~fl~~i~l~~~p~g~~~F~c~sWv~~~~~~~~~riff~n~~yLp~~tp~~L~ 209 (896)
++|+++|+|+++||+||||+|+|+|++||||++|+|+++|+|+|||+|||||||+++|+++||||+||+|||++||++|+
T Consensus 158 ~~y~~~F~~~~~fG~pGAi~V~N~h~~EffL~~itle~~p~g~v~F~cnSWV~p~~~~~~~RiFF~Nk~YLP~~tP~~l~ 237 (919)
T PLN02264 158 VHYTAEFTVDSAFGSPGAITVTNKHQKEFFLESITIEGFACGPVHFPCNSWVQSQKDHPGKRIFFTNQPYLPSETPAGLR 237 (919)
T ss_pred eEEEEEEEeccccCCcceEEEEeCCCceEEEEEEEeccCCCCcEEEecCCccccCcCCCCCceEecCCCcCcccCCHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhCCCCCcccccCeeeecccccCCCCCCccCCCCCccccCCCCCCCCCCccCCCCCCCCCCCCCCCccC--
Q 002649 210 RLRAEELNNLQGDGQGERKIHERIYDYDVYNDLGMPDSILKSDLVRPVLGGKEHPYPRRCRTGHPKSSKDPASESWSL-- 287 (896)
Q Consensus 210 ~~R~~EL~~lrg~g~g~r~~~driYdy~~yndlG~Pd~~~~~~~~rpvlgg~~~pyprr~rtgr~~~~~dp~~e~~~~-- 287 (896)
+|||+||++|||||+||||+||||||||||||||+||+ +++++||||||++|||||||||||+||++||.+|||..
T Consensus 238 ~~Re~eL~~lRGdg~Gerk~~dRiYdYd~YNDLG~Pd~--~~~~~RpvLGG~~~PYPRR~RTGR~~t~~dp~~Esr~~~~ 315 (919)
T PLN02264 238 ALREKELRNLRGDGKGVRKLSDRIYDFDVYNDLGNPDK--SRELARPTLGGKKIPYPRRCRTGRLPTDSDMMAESRVEKP 315 (919)
T ss_pred HHHHHHHHHhcCCCCCcCCcccchhhhhhhccCCCCCC--CccccCcccCCCCCCCCCCCcCCCCCCCCCCcccccccCC
Confidence 99999999999999999999999999999999999999 99999999999779999999999999999999999954
Q ss_pred -CCccCCCCCCChhhhcchhhchhHHHHhhhhhhHHHHhhcCCCCCCCCHHHHHHHhccCCCCCCccccccccccc-chh
Q 002649 288 -SVYVPRDEAFSLLKTAQFSATGVYSALHAVIPFVESILRIGKDKGFPSLEAIDKLFNEGVELPPEIEKLPSWLKI-LPN 365 (896)
Q Consensus 288 -~~yvPrDe~f~~~K~~~f~~~~~~~~~~~~~p~l~~~~~~~~~~~f~sf~di~~ly~~~~~~~~~~~~~~~~~~~-~~~ 365 (896)
.+||||||+|+++|+++|+++++||++|.++|.|+++++ .+ +|+||+||++||++|+++| ....++.++.+ +|.
T Consensus 316 ~~iYvPrDE~f~~~K~~~f~~~~lk~~~~~~~p~~~~~~~-~~--~F~~f~~i~~Ly~~g~~l~-~~~~~~~~~~~p~~~ 391 (919)
T PLN02264 316 LPMYVPRDEQFEESKQDTFAAGRLKAVLHNLIPSLKASIL-AE--DFANFGEIDSLYKEGLLLK-LGFQDDIFKKFPLPK 391 (919)
T ss_pred CceeCCCCCCcccchhhhHHHHHHHHHHHHhhhhhhhhcC-CC--CCCCHHHHHHHHhcCCcCC-cchhhhHhhcCChHH
Confidence 479999999999999999999999999999999999988 44 9999999999999999998 32112233344 445
Q ss_pred hhhhhcccCcccccccCchhcccccccccccHHHHHHHhhCCCccccccccCCCCCCCCCCCCCCCCCccccHHHHHHhh
Q 002649 366 FFKSIANTGKDILRFETPETLKRDKLFWLRDEEFGRETLAGLNPYGISLVADWPLKSTLDPETYGPTESAITKELIEKEI 445 (896)
Q Consensus 366 ~~~~~~~~~~~~l~fp~P~~~~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~s~ld~~~yg~~~s~IT~e~i~~~l 445 (896)
+.+.++++++.+||||+|++|++|+++|++|+|||||+|||+||++|+||++||++|+|||+.||+++|+||++||+..|
T Consensus 392 ~~~~~~~~~~~~lkf~~P~vi~~d~~~W~~DeeFarQ~LaGvNP~~I~rl~e~P~~s~ld~~~yg~~~s~it~e~v~~~L 471 (919)
T PLN02264 392 VVTTLQESSEGLLKYDTPKILSKDKFAWLRDDEFARQAIAGINPVNIERVKVFPPVSNLDPEIYGPQHSALTEDHIIGHL 471 (919)
T ss_pred HHHHhhhcccccccCCCCceeecChhhccCHHHHHHHHHcCCCchhhhhhhhcCCCCCCCHhhcCCccchhhHHHHhhcc
Confidence 66666888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccHHHHHhcCcEEEeecccccccchhcccCCCCccccccceEEeeCCCCceeeEEEEecCCCCCCCCCCceeeeCCC
Q 002649 446 GGSMTVEEAIKQKKLFIIDYHDALLPYVEKVRQIKDTTLYGSRTVFFLNPDGTLRPLAIELTRPPMDGKPQWKQVFTPST 525 (896)
Q Consensus 446 ~g~~tl~~al~~grLFi~Dy~d~~lp~l~~in~~~g~~~yA~~~Lffl~~dG~L~PlAIqL~~p~~~~~~~~~~VfTP~d 525 (896)
+| +||+|||++|||||+||||++|||++++|.+++++.|||+||||++++|+|+||||||+++++++++++++||||++
T Consensus 472 ~G-~Tl~eAl~~~rLFilDy~d~~lp~l~~in~~~g~~~YAprtLFfL~~dG~L~PlAIqL~~p~~~~~~~~~~VftP~~ 550 (919)
T PLN02264 472 DG-LSVQQALEENRLFMVDYHDIYLPFLDRINALDGRKAYATRTIFFLTRLGTLKPIAIELSLPPSGPNSRSKRVVTPPV 550 (919)
T ss_pred CC-CcHHHHHHcCCEEEEeChhhhhhhhhhhccCCCcEeEcceEEEEECCCCCEeeEEEEecCCCCCCCcCcceeECCCC
Confidence 98 99999999999999999999999999999999999999999999999999999999999998766666789999977
Q ss_pred CCCCCchHHHHHHHHHHhhhhhhhHHHHhhhhcccchhhHHHHHhcccCCcCchhhhcccchhhhccchHHHHhcccCCC
Q 002649 526 GNSTESWLWRLAKAHVLAHDSGYHQLISHWLRTHCCVEPYVIATNRRLSAMHPINRLLKPHFRYTMEINALARKVLINAD 605 (896)
Q Consensus 526 ~~~~~~~~W~LAK~~v~~aD~~~HqlvsHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~~g 605 (896)
+++++|.|+||||||++||++|||+|+||++||++||||||||+||||.+|||||||.||||+||+||++||++|||+|
T Consensus 551 -d~~~~w~W~LAK~~V~~aD~~~HQlisHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~TL~INalAR~~LIn~g 629 (919)
T PLN02264 551 -DATSNWMWQLAKAHVCSNDAGVHQLVNHWLRTHACLEPFILAAHRQLSAMHPIFKLLDPHMRYTLEINALARQTLISAD 629 (919)
T ss_pred -CCCCchHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhhhhcccCCccCcHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 6678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCchHHHHHHHHHHhccCCCCCCCCchHHHhcCCCCCCCCCCCccccCcCCCCcchhhHHHHHHHHHHHHHhc
Q 002649 606 GIFETNFFPGKYCMEFSSVIYDKHWRFDNEGLPKDLIRRGIAVEDPKAPHGLKLNIEDYPYANDGLDLWDALKQWVTNYV 685 (896)
Q Consensus 606 Giie~~f~~G~~~~elss~~Y~~~w~F~~~~LP~DL~~RGva~~D~~~~hgl~l~l~dYpYrdDGL~IW~AI~~~V~~yv 685 (896)
|++|++|++|+|+|||++.+|++.|+|++++||+||++|||+++|+++|||+++.|||||||+|||+||+||++||++||
T Consensus 630 Giid~~f~pg~~~~elss~aYk~~W~F~~~~LP~DL~~RGv~~~D~~~phgl~l~ipdYPYrdDGL~iW~AIk~~V~~yv 709 (919)
T PLN02264 630 GVIESCFTAGQYGMEISAAAYKNSWRFDMEGLPADLIRRGMAVPDPTQPHGLKLLIEDYPYANDGLLLWSAIQTWVRTYV 709 (919)
T ss_pred ceEEEeeccchhHHHHHHHHHHhccCCccccCHHHHHHcCCCCCCcccccchhhccCCCcchhhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999997799999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccCcHHHHHHHHHHHhcccCCCCCCCCCCCCCChhHHHHHHhhhhccccccccccccccceeccccCCccc
Q 002649 686 NHYYPDPSLVESDEELQAWWTEIRTVGHAEKKDEPWWPVLKTPQDLIEIITTIAWVASGHHAAVNFGQYLYGGYFPNRPT 765 (896)
Q Consensus 686 ~~YY~~D~~V~~D~ELQaW~~Ei~~~G~~d~kd~p~~P~l~T~~~Li~~lT~iI~~aSaqHAAVNfgQy~y~gfvPN~P~ 765 (896)
++||++|++|++|.|||+||+||++.||+|+++++|||+|+|+++||++||+|||+|||||||||||||+|+||+||+|+
T Consensus 710 ~~YY~~D~~V~~D~ELQaW~~Ei~~~Gh~d~~d~~~~p~l~T~~eLi~~lT~IIf~aSaqHAAVNFgQydy~gfvPN~P~ 789 (919)
T PLN02264 710 ERYYPDPSLICTDKELQAWYSESINVGHADLRDADWWPKLSTVDDLVSILTTLIWLASAQHAALNFGQYPYGGYVPNRPP 789 (919)
T ss_pred HHhCCChhhhcCCHHHHHHHHHHHhccCCCCcCCCCCCCCCCHHHHHHHHHHHHHhhhhhhhhhhcCcccccccCCCCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCChhHHHhhhhchHHHHHhcCCChHHHHHHHHHHHHhcCCCCCCccccCCCCC-CCCCcHHHHHHHHHHH
Q 002649 766 VARTNLPNEDQTKEEWKSFLEKPEAALLRCFPAQFQALTVMLVIDLLSTHSPDEEYLGKEMEP-AWGDDPVIKAAFEEFN 844 (896)
Q Consensus 766 ~~r~p~P~~kkg~~e~~~~~~~pe~~~L~tlP~~~qa~~~m~~~~~LS~h~~de~yLG~~~~~-~~~~d~~~~~a~~~F~ 844 (896)
+||+|||++ ++++|++|+.+|+++||++||++.||+.+|+++++||+|++||+|||++..+ .|+.|+++++||++|+
T Consensus 790 ~~rrp~P~~--~~~e~~~~~~~pe~~~L~tlP~~~qt~~~ms~~~iLS~hs~dE~yLG~~~~~~~w~~D~~~~~af~rF~ 867 (919)
T PLN02264 790 LMRRLIPDE--SDPEYASFLADPQKYYFSSMPSLLQTTKFMAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVEAFYGFS 867 (919)
T ss_pred HhcCCCCCC--CChhhhhhhcChHHHHHHHCCCHHHHHHHHHHHHHHhhcCCCceeccCCCCccccccCHHHHHHHHHHH
Confidence 999999988 6689999999999999999999999999999999999999999999998765 7999999999999999
Q ss_pred HHHHHHHHHHHhhcCCccccccCCCccCCceeecCCCCCCCCcCCCCccccC
Q 002649 845 LKMQELERIIDDRNSNENLKNRTGAAIVPYELLKPFSEPGATGKGVPYSISI 896 (896)
Q Consensus 845 ~~L~~Ie~~I~~RN~~~~lknr~g~~~~PY~~L~Pss~~g~t~~gIPnSIsI 896 (896)
++|++||++|++||++++||||+||+++||+||+|+++||||||||||||||
T Consensus 868 ~~L~eIe~~I~~RN~~~~~knR~G~~~~PY~lL~P~s~~G~T~~gIPNSISI 919 (919)
T PLN02264 868 AEIGRIEKEIEKRNADPSRRNRCGAGVLPYELLAPSSEPGVTCRGVPNSVSI 919 (919)
T ss_pred HHHHHHHHHHHHHcCCccccccCCCCCCCceeeCCCCCCCCCcCCCCCcccC
Confidence 9999999999999999999999999999999999999999999999999998
No 3
>PLN02337 lipoxygenase
Probab=100.00 E-value=2.5e-259 Score=2245.72 Aligned_cols=825 Identities=46% Similarity=0.821 Sum_probs=784.2
Q ss_pred ceeeEEEEeecceeEeeeeEeeccccCCchhhhhccc-cEEEEEEecccCC-CCC-Ccc----cccccccccCCCCCCCC
Q 002649 56 SIKAIFNLTAEKSTKVKAVITVKPIVSDPLAVEKLIG-TLVLELVSAELDP-ETG-KEK----PTIKSRAHRSLFTDDDG 128 (896)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g-~~~l~lvs~~~~~-~~~-~~~----~~~~~~~~~~~~~~~~~ 128 (896)
++||+|++|+|++++++++.+ ++ +|+++|++| +|+|||||++++| +|| +|| ++|++|+++.....+++
T Consensus 20 ~~~~~v~l~~k~~ld~~~~~~---~~--lD~~~~l~G~~v~lqLvS~~~~~p~~g~~gk~~k~a~l~~w~~~~~~~~~~~ 94 (866)
T PLN02337 20 KIKGTVVLMKKNVLDFNDFNA---SV--LDRVHELLGKGVSLQLISSTVVDPENGLRGKLGKEAYLEKWITTITSLTAGE 94 (866)
T ss_pred eEEEEEEEEEecccchhhccc---ch--hhhHHHhcCCeEEEEEEeccccccccCCccccCCccchhhhccCCCCCCCCc
Confidence 599999999999999998765 45 899999999 9999999999998 677 443 99999998755545555
Q ss_pred ceeEEEEEecCCCCCceeEEEEEeCCCCCeeEeEEEEeccCC-CcEEEecCCcccCCCCCCcceEEeeCcccccCCCChH
Q 002649 129 NLKYKTEFDVPSNFGEVGAILVEADQLTETFLKDIALDGLRN-GPVNIACDSWIQPKIVDKQKRIFFTNKSYLPSQTPNG 207 (896)
Q Consensus 129 ~~~y~v~f~~~~~~G~pgai~v~n~~~~e~fl~~i~l~~~p~-g~~~F~c~sWv~~~~~~~~~riff~n~~yLp~~tp~~ 207 (896)
++|+|+|+|+++||+||||+|+|.|++||||++|+|+++|+ |+|||+|||||||+++|+++||||+||+|||++||++
T Consensus 95 -~~y~~~F~~~~~fG~pGAi~V~N~h~~EffL~sitle~~p~~g~v~f~cnSWV~~~~~~~~~RiFF~nk~ylp~~tP~~ 173 (866)
T PLN02337 95 -SAFKVTFDWDEKIGVPGAFIIKNNHHSEFYLKTVTLEDVPGHGRVHFVCNSWIYPAKRYRYDRVFFSNKTYLPSQTPAP 173 (866)
T ss_pred -eEEEEEEEecccCCCcceEEEEecCCceEEEEEEEEecCCCCCcEEEecCCccccCCCCCCCceEecCCCcCcccccHH
Confidence 69999999999999999999999999999999999999995 8999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhhhCCCCCcccccCeeeecccccCCCCCCccCCCCCccccCCC-CCCCCCCccCCCCCCCCCCCCCCCcc
Q 002649 208 LARLRAEELNNLQGDGQGERKIHERIYDYDVYNDLGMPDSILKSDLVRPVLGG-KEHPYPRRCRTGHPKSSKDPASESWS 286 (896)
Q Consensus 208 L~~~R~~EL~~lrg~g~g~r~~~driYdy~~yndlG~Pd~~~~~~~~rpvlgg-~~~pyprr~rtgr~~~~~dp~~e~~~ 286 (896)
|++|||+||++|||||+||||+||||||||||||||+||+ +++++|||||| ++|||||||||||+||++||.+|||.
T Consensus 174 l~~~R~~eL~~lrG~g~gerk~~dRiYdyd~YnDlg~pd~--~~~~~RpvLGg~~~~pyPRR~rTgr~~t~~dp~~esr~ 251 (866)
T PLN02337 174 LRPYREEELVNLRGDGKGELKEWDRVYDYDYYNDLGDPDK--GNPYARPVLGGSQEYPYPRRGRTGRKPTKTDPNSESRL 251 (866)
T ss_pred HHHHHHHHHHHhcCCCCCCCCcccchhhhhhhccCCCCCC--CccccCccCCCCCCCCCCCcccCCCCCCCCCCcccccc
Confidence 9999999999999999999999999999999999999999 99999999999 57999999999999999999999994
Q ss_pred C----CCccCCCCCCChhhhcchhhchhHHHHhhhhhhHHHHhhcCCCCCCCCHHHHHHHhccCCCCCCccccccccccc
Q 002649 287 L----SVYVPRDEAFSLLKTAQFSATGVYSALHAVIPFVESILRIGKDKGFPSLEAIDKLFNEGVELPPEIEKLPSWLKI 362 (896)
Q Consensus 287 ~----~~yvPrDe~f~~~K~~~f~~~~~~~~~~~~~p~l~~~~~~~~~~~f~sf~di~~ly~~~~~~~~~~~~~~~~~~~ 362 (896)
. .+||||||+|+++|++||+++++||++|.++|.|+++++ .+..+|++|+||++||++|+++| ..+.-+.+++.
T Consensus 252 ~~~~~~~yvPrDE~f~~~k~~~f~~~~l~~~~~~~~p~~~~~~~-~~~~~f~~f~~i~~ly~~g~~lp-~~~~~~~~~~~ 329 (866)
T PLN02337 252 PLLSLNIYVPRDERFGHLKMSDFLAYALKAIAQVLVPELEALFD-KTPNEFDSFEDVLKLYEGGIKLP-NGPLLEELRKN 329 (866)
T ss_pred ccCCCCcccCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHhhcCCCCC-CchHHHHhhhc
Confidence 3 479999999999999999999999999999999999998 78999999999999999999999 32111223333
Q ss_pred --chhhhhhhcccCcccccccCchhcccccccccccHHHHHHHhhCCCccccccccCCCCCCCCCCCCCCCCCccccHHH
Q 002649 363 --LPNFFKSIANTGKDILRFETPETLKRDKLFWLRDEEFGRETLAGLNPYGISLVADWPLKSTLDPETYGPTESAITKEL 440 (896)
Q Consensus 363 --~~~~~~~~~~~~~~~l~fp~P~~~~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~s~ld~~~yg~~~s~IT~e~ 440 (896)
++.++++++++++.+||||+|+||++|+++|++|+|||||+|||+||++|+||++||++|+|||++||+++|+||++|
T Consensus 330 ~p~~~~~~~~~~~~~~~l~fp~P~vi~~d~~~W~~DeeFarQ~LaG~NP~~I~rl~~~P~~~~ld~~~yg~~~s~iT~e~ 409 (866)
T PLN02337 330 IPLEMLKELLRTDGEYLLKFPMPQVIKEDKSAWRTDEEFAREMLAGVNPVVIRRLTEFPPKSKLDPKKYGDQNSSITEEH 409 (866)
T ss_pred ChHHHHHHHHhhcccccccCCCCceeecccccccCHHHHHHHHhcCCCChheeecccCCCcccCChhhcCCccCccCHHH
Confidence 345677778889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCCCccHHHHHhcCcEEEeecccccccchhcccCCCCccccccceEEeeCCCCceeeEEEEecCCCCCCC--CCCc
Q 002649 441 IEKEIGGSMTVEEAIKQKKLFIIDYHDALLPYVEKVRQIKDTTLYGSRTVFFLNPDGTLRPLAIELTRPPMDGK--PQWK 518 (896)
Q Consensus 441 i~~~l~g~~tl~~al~~grLFi~Dy~d~~lp~l~~in~~~g~~~yA~~~Lffl~~dG~L~PlAIqL~~p~~~~~--~~~~ 518 (896)
|++.|+| +||+|||++|||||+||||++|||+.++|...++ .|||+||||++++|+|+||||||++|+..++ ++.+
T Consensus 410 v~~~L~g-~Tl~eAl~~~rLfi~Dy~d~~lp~l~~in~~~~k-~yA~~tLffl~~dG~L~PlAIqL~~p~~~~~~~g~~~ 487 (866)
T PLN02337 410 IEKNLEG-LTVQEALEKNRLFILDHHDALMPYLRRINSTSTK-TYATRTLLFLKDDGTLKPLAIELSLPHPQGDKFGAVS 487 (866)
T ss_pred HHhccCC-ccHHHHHHcCCEEEEecchhcCcccccccCCCCc-cccceeEEEECCCCCEeEEEEEeccCCCCcccCCCCC
Confidence 9999998 9999999999999999999999999999986554 9999999999999999999999998865433 4579
Q ss_pred eeeeCCCCCCCCchHHHHHHHHHHhhhhhhhHHHHhhhhcccchhhHHHHHhcccCCcCchhhhcccchhhhccchHHHH
Q 002649 519 QVFTPSTGNSTESWLWRLAKAHVLAHDSGYHQLISHWLRTHCCVEPYVIATNRRLSAMHPINRLLKPHFRYTMEINALAR 598 (896)
Q Consensus 519 ~VfTP~d~~~~~~~~W~LAK~~v~~aD~~~HqlvsHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR 598 (896)
+||||++ +++++|.|+|||+||++||+++||+|+||++||+++|||||||+||||.+|||||||+||||+||+||++||
T Consensus 488 ~VfTP~~-~~~~~~~W~lAK~~v~~aD~~~HqlisHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~~AR 566 (866)
T PLN02337 488 KVYTPAE-DGVEGSVWQLAKAYVAVNDSGYHQLISHWLNTHAVIEPFVIATNRQLSVLHPIHKLLHPHFRDTMNINALAR 566 (866)
T ss_pred CeECCCC-CCCCcchHHHHHHHHHHhhHHHHHHHHHHhhhhhhHHHHHHHHhccCCCcCcHHHHHHHHHHHHHHHHHHHH
Confidence 9999998 677799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCcccccccCCchHHHHHHHHHHhccCCCCCCCCchHHHhcCCCCCCCCCCCccccCcCCCCcchhhHHHHHHHH
Q 002649 599 KVLINADGIFETNFFPGKYCMEFSSVIYDKHWRFDNEGLPKDLIRRGIAVEDPKAPHGLKLNIEDYPYANDGLDLWDALK 678 (896)
Q Consensus 599 ~~LI~~gGiie~~f~~G~~~~elss~~Y~~~w~F~~~~LP~DL~~RGva~~D~~~~hgl~l~l~dYpYrdDGL~IW~AI~ 678 (896)
++||++||++|+++++|+|+|||++++|++ |+|++++||+||++|||+++|+++|||+++.|||||||+|||+||+||+
T Consensus 567 ~~LI~~gGiid~~~~~g~~~~els~~~yk~-w~F~~~~LP~DL~~RGv~~~D~~~p~g~~l~i~dYPYrdDGL~iW~AI~ 645 (866)
T PLN02337 567 QILINAGGILESTVFPGKYALEMSSVVYKN-WNFTEQALPADLIKRGVAVEDPSSPHGVRLLIEDYPYAVDGLEIWSAIE 645 (866)
T ss_pred HheeCCCCeeeeeeccchhHHHHHHHHHhc-CCcccccCHHHHHHcCCCccccccccccccccCCCcchhhHHHHHHHHH
Confidence 999999999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccccccccccccCcHHHHHHHHHHHhcccCCCCCCCCCCCCCChhHHHHHHhhhhccccccccccccccceecc
Q 002649 679 QWVTNYVNHYYPDPSLVESDEELQAWWTEIRTVGHAEKKDEPWWPVLKTPQDLIEIITTIAWVASGHHAAVNFGQYLYGG 758 (896)
Q Consensus 679 ~~V~~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~G~~d~kd~p~~P~l~T~~~Li~~lT~iI~~aSaqHAAVNfgQy~y~g 758 (896)
+||++||++||++|++|++|.|||+||+||+++||+++++++|||+|+|+++||++||+|||+|||||||||||||+|+|
T Consensus 646 ~~V~~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~G~gd~k~~~~~p~l~T~~eLv~~lT~iIf~aSaqHAAVNfgQy~y~g 725 (866)
T PLN02337 646 TWVKEYCAFYYPTDDMVQGDTELQSWWKEVREEGHGDLKDEPWWPKMQTVAELIESCTIIIWIASALHAAVNFGQYPYAG 725 (866)
T ss_pred HHHHHHHHhhCCchHhhccCHHHHHHHHHHHhcCCCCccCCCCCCccCCHHHHHHHHHhhhhhcchhhhhhhcCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcccccCCCCCCCCCChhHHHhhhhchHHHHHhcCCChHHHHHHHHHHHHhcCCCCCCccccCCCCCCCCCcHHHHH
Q 002649 759 YFPNRPTVARTNLPNEDQTKEEWKSFLEKPEAALLRCFPAQFQALTVMLVIDLLSTHSPDEEYLGKEMEPAWGDDPVIKA 838 (896)
Q Consensus 759 fvPN~P~~~r~p~P~~kkg~~e~~~~~~~pe~~~L~tlP~~~qa~~~m~~~~~LS~h~~de~yLG~~~~~~~~~d~~~~~ 838 (896)
|+||+|++||++||++ |+.+|.+|..+||+++|++||++.||+.+|+++++||+|++||+|||+|.++.|+.|+++++
T Consensus 726 fvPN~P~~~r~~~P~~--~~~e~~~l~~~~e~~~L~tlp~~~qt~~~~~l~~lLS~~s~de~yLG~~~~~~w~~d~~~~~ 803 (866)
T PLN02337 726 YLPNRPTVSRRFMPEP--GTPEYEELEKNPDKAFLKTITAQLQTLLGISLIEILSRHSSDEVYLGQRDTPEWTSDAEPLE 803 (866)
T ss_pred ccCCCchhhcCCCCCC--CchhhhhhccCcHHHHHHhCCCHHHHHHHHHHHHHhccCCCCceeccCcCCcccccCHHHHH
Confidence 9999999999999976 78899999999999999999999999999999999999999999999999889999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCccccccCCCccCCceeecCCC-----CCCCCcCCCCccccC
Q 002649 839 AFEEFNLKMQELERIIDDRNSNENLKNRTGAAIVPYELLKPFS-----EPGATGKGVPYSISI 896 (896)
Q Consensus 839 a~~~F~~~L~~Ie~~I~~RN~~~~lknr~g~~~~PY~~L~Pss-----~~g~t~~gIPnSIsI 896 (896)
|+++|+++|++||++|++||++++||||+||+++||+||+|++ +||||||||||||||
T Consensus 804 a~~~F~~~L~eIe~~I~~RN~~~~~knr~G~~~~PY~lL~P~~~~~~~~~g~t~~gIPNSISI 866 (866)
T PLN02337 804 AFKRFGERLVEIENRIVDMNKDPRLKNRVGPVKMPYTLLYPNTSDYTGEGGLTGKGIPNSVSI 866 (866)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhhcccCCCCCCceeeCCCCccccCCCCcccCCCCCcccC
Confidence 9999999999999999999999999999999999999999999 999999999999998
No 4
>PF00305 Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Lipoxygenases (1.13.11.- from EC) are a class of iron-containing dioxygenases which catalyses the hydroperoxidation of lipids, containing a cis,cis-1,4-pentadiene structure. They are common in plants where they may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. In mammals a number of lipoxygenases isozymes are involved in the metabolism of prostaglandins and leukotrienes []. Sequence data is available for the following lipoxygenases: Plant lipoxygenases (1.13.11.12 from EC, IPR001246 from INTERPRO). Plants express a variety of cytosolic isozymes as well as what seems to be a chloroplast isozyme []. Mammalian arachidonate 5-lipoxygenase (1.13.11.34 from EC, IPR001885 from INTERPRO). Mammalian arachidonate 12-lipoxygenase (1.13.11.31 from EC, IPR001885 from INTERPRO). Mammalian erythroid cell-specific 15-lipoxygenase (1.13.11.33 from EC, IPR001885 from INTERPRO). The iron atom in lipoxygenases is bound by four ligands, three of which are histidine residues []. Six histidines are conserved in all lipoxygenase sequences, five of them are found clustered in a stretch of 40 amino acids. This region contains two of the three iron-ligands; the other histidines have been shown [] to be important for the activity of lipoxygenases. This entry represents the C-terminal region of these proteins.; GO: 0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 3FG3_D 3FG1_C 3FG4_D 3DY5_A 2FNQ_B 2P0M_A 3RDE_B 2IUJ_A 1RRL_B 1JNQ_A ....
Probab=100.00 E-value=1.1e-204 Score=1782.38 Aligned_cols=663 Identities=54% Similarity=0.955 Sum_probs=577.8
Q ss_pred ChHhHHHHHHHHHhhhCCCCCcccccCeeeecccccCCCCCCccCCCCCccccCCC-CCCCCCCccCCCCCCCCCCCCCC
Q 002649 205 PNGLARLRAEELNNLQGDGQGERKIHERIYDYDVYNDLGMPDSILKSDLVRPVLGG-KEHPYPRRCRTGHPKSSKDPASE 283 (896)
Q Consensus 205 p~~L~~~R~~EL~~lrg~g~g~r~~~driYdy~~yndlG~Pd~~~~~~~~rpvlgg-~~~pyprr~rtgr~~~~~dp~~e 283 (896)
|.+|+++|++||++|||||+||||+||||||||||||||+||+ +++++|||||| ++|||||||||||+|+++||.+|
T Consensus 1 ~~~l~~~R~~eL~~lrG~g~gerk~~dRiYdYd~YnDLG~pd~--~~~~~RpvlGgs~~~PYPRR~RTGr~~~~~Dp~sE 78 (667)
T PF00305_consen 1 PAGLKKLREEELKNLRGDGTGERKEWDRIYDYDVYNDLGNPDK--GPELARPVLGGSKEFPYPRRCRTGRPPTKTDPKSE 78 (667)
T ss_dssp SGGGHHHHHHHHHHHHTTS-S---TT-----EE-B-SSSBGGG--TGCG----BSSSSSS----EE----SBESSCTTSB
T ss_pred ChHHHHHHHHHHHHhcCCCCCccccccceeeeecccCCCCCCC--CCcCCCCCCCCCCCCCCCccCCCCCCCCCCCcccc
Confidence 7899999999999999999999999999999999999999999 99999999999 79999999999999999999999
Q ss_pred CccCCCccCCCCCCChhhhcchhhchhHHHHhhhhhhHHHHhhcCCCCCCCCHHHHHHHhccCCCCCCccccccccccc-
Q 002649 284 SWSLSVYVPRDEAFSLLKTAQFSATGVYSALHAVIPFVESILRIGKDKGFPSLEAIDKLFNEGVELPPEIEKLPSWLKI- 362 (896)
Q Consensus 284 ~~~~~~yvPrDe~f~~~K~~~f~~~~~~~~~~~~~p~l~~~~~~~~~~~f~sf~di~~ly~~~~~~~~~~~~~~~~~~~- 362 (896)
+|..++||||||+|++.|+++|.++++||++|.++|.|++++. .+..+|+||+||++||++|+++| .. .+.+.+
T Consensus 79 sr~~~~YVPRDE~F~~~K~~dF~~~~lks~~~~llP~L~~~~~-~~~~eF~sF~dId~LY~~g~~l~-~~---~~~~~~~ 153 (667)
T PF00305_consen 79 SRSGDIYVPRDERFSEVKQSDFLANALKSLLHALLPALKSLFD-DTPNEFDSFEDIDDLYEEGIKLP-TD---LLKKLIP 153 (667)
T ss_dssp GC-SSGGS-GGGS-SCSSGGGHHHHHHHHHHHTHHHHHHHHTT-SSTSSCSSHHHHHHHHTTTEE---HH---HHCCHTT
T ss_pred CccccccCCccccccchhHHHHHHHHHHHHHHhHHHHHHHHhc-ccCcccCCHHHHHHHHhccccch-hh---HhhhcCc
Confidence 9988999999999999999999999999999999999999977 78899999999999999999888 32 122222
Q ss_pred chhhhhhhcccCcccccccCchhcccccccccccHHHHHHHhhCCCccccccccCCCCCCCCCCCCCCCCCccccHHHHH
Q 002649 363 LPNFFKSIANTGKDILRFETPETLKRDKLFWLRDEEFGRETLAGLNPYGISLVADWPLKSTLDPETYGPTESAITKELIE 442 (896)
Q Consensus 363 ~~~~~~~~~~~~~~~l~fp~P~~~~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~s~ld~~~yg~~~s~IT~e~i~ 442 (896)
++.+.+.+.++++.++|||+|+|++.++++|++|+|||||+|||+||++|+||++||++|+|||++||+++++||++||+
T Consensus 154 ~~~~~~~~~~~~~~~~kf~~p~v~~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~~~ld~~~yg~~~s~it~e~i~ 233 (667)
T PF00305_consen 154 LELLKELFRTDGENILKFPTPQVIERDRFAWRTDEEFARQRLAGVNPVVIRRLTEFPPKSKLDPAIYGDQESPITDEHIE 233 (667)
T ss_dssp STTCCTTSBETSSSEEB----HHHHCHHHHTTSHHHHHHHHHHSSSTTSEEE-SSSSTTS-SSHHCCTSSB-STTHHHHH
T ss_pred HHHHHHHHhhcccceeeCCCCccchhhhhccCChHHHHHHHHcCCCchHhhccccCCccccccHhhcCCccCCchHHHhh
Confidence 44577778888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhCCCccHHHHHhcCcEEEeecccccccchhcccCCCCccccccceEEeeCCCCceeeEEEEecCCCCCCCCCCceeee
Q 002649 443 KEIGGSMTVEEAIKQKKLFIIDYHDALLPYVEKVRQIKDTTLYGSRTVFFLNPDGTLRPLAIELTRPPMDGKPQWKQVFT 522 (896)
Q Consensus 443 ~~l~g~~tl~~al~~grLFi~Dy~d~~lp~l~~in~~~g~~~yA~~~Lffl~~dG~L~PlAIqL~~p~~~~~~~~~~VfT 522 (896)
..|+| +||++||++|||||+|||++++|+++++|. .+++.|||+||||++++|+|+||||||++|+..+.++.++|||
T Consensus 234 ~~l~g-~tl~~al~~~rLfi~Dy~~~~~~~~~~i~~-~~~~~~A~~~Lf~l~~~g~L~PlAIqL~~p~~~~~~~~~~v~t 311 (667)
T PF00305_consen 234 PQLEG-LTLEEALKDGRLFILDYHDLFGPYLNKINE-KGRYAYAPRALFFLNPDGTLKPLAIQLSQPGPEGPPQFNPVFT 311 (667)
T ss_dssp HHCHC-S-HHHHHHTT-EEEEEEGGGTTHHHHHHTT-CCGBG-EEEEEEEEETTSEEEEEEEECSECBTTCS-EEEEEE-
T ss_pred hccCC-CcHHHHHhcCCeEEEeehhhcccccccccc-CCcEeccceeEEEEcCCCCEeeeEEeccCCCCcccCccceeee
Confidence 99999 999999999999999999999999999998 7899999999999999999999999998886555456789999
Q ss_pred CCCCCCCCchHHHHHHHHHHhhhhhhhHHHHhhhhcccchhhHHHHHhcccCCcCchhhhcccchhhhccchHHHHhccc
Q 002649 523 PSTGNSTESWLWRLAKAHVLAHDSGYHQLISHWLRTHCCVEPYVIATNRRLSAMHPINRLLKPHFRYTMEINALARKVLI 602 (896)
Q Consensus 523 P~d~~~~~~~~W~LAK~~v~~aD~~~HqlvsHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI 602 (896)
|++ +++.+|.|+|||+||++||+++||+|+||++||+|||||||||+||||.+|||||||.||||+||+||++||++||
T Consensus 312 P~~-d~~~~~~W~lAK~~v~~aD~~~HqlisHll~THlv~Ep~~vAt~R~Ls~~HPi~kLL~PH~r~tl~IN~~Ar~~Li 390 (667)
T PF00305_consen 312 PSD-DGTEDWLWLLAKAHVQVADANYHQLISHLLRTHLVMEPFIVATHRQLSEMHPIYKLLHPHFRYTLAINALARQSLI 390 (667)
T ss_dssp TTS-SSHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHS-TTSHHHHHHGGGGTTHHHHHHHHHHHTS
T ss_pred cCC-CCccchHHHHHHHHHHhhhHHHHHHHhhhhhhhhhhHHHHHHHhcCCCCCCCceeeccceeecchhhhHHHHHHhh
Confidence 996 5566799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccccCCchHHHHHHHHHHhccCCCCCCCCchHHHhcCCCCCCCCCCCccccCcCCCCcchhhHHHHHHHHHHHH
Q 002649 603 NADGIFETNFFPGKYCMEFSSVIYDKHWRFDNEGLPKDLIRRGIAVEDPKAPHGLKLNIEDYPYANDGLDLWDALKQWVT 682 (896)
Q Consensus 603 ~~gGiie~~f~~G~~~~elss~~Y~~~w~F~~~~LP~DL~~RGva~~D~~~~hgl~l~l~dYpYrdDGL~IW~AI~~~V~ 682 (896)
++||+||++|++|+++++|++.+|++ |+|++++||+||++|||+++|++++||+++.|||||||+|||+||+||++||+
T Consensus 391 ~~gG~id~~~~~g~~~~~l~~~~y~~-~~f~~~~lP~dL~~RG~~~~D~~~~~g~~~~l~~YpY~dDgl~iW~aI~~~V~ 469 (667)
T PF00305_consen 391 NAGGIIDKTFSPGKYGMELSSRAYKN-WRFDDQALPADLKKRGMAVDDPSSPHGLRLVLPDYPYRDDGLLIWDAIKKFVS 469 (667)
T ss_dssp STTSHHHHHSTTTTTHHHHHHHHHTT---GGGGSHHHHHHHTTSEEE-TTSTTSEETTSTT-HHHHHHHHHHHHHHHHHH
T ss_pred ccCcccccccchhhHHHHHHHHHHhh-CCcccccCHHHHHhhcccccccccccccccccccCChhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred HhccccccccccccCcHHHHHHHHHHHhcccCCCCCCCCCCCCCChhHHHHHHhhhhccccccccccccccceeccccCC
Q 002649 683 NYVNHYYPDPSLVESDEELQAWWTEIRTVGHAEKKDEPWWPVLKTPQDLIEIITTIAWVASGHHAAVNFGQYLYGGYFPN 762 (896)
Q Consensus 683 ~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~G~~d~kd~p~~P~l~T~~~Li~~lT~iI~~aSaqHAAVNfgQy~y~gfvPN 762 (896)
+||++||++|++|++|.|||+||+||+++||+|+++.+||++|+|+++||++||+|||+|||||||||||||+|+||+||
T Consensus 470 ~~v~~yY~~d~~V~~D~ELQaW~~Ei~~~G~~~~~~~~~~~~i~t~~~Li~~lT~iI~~~S~qHaAVNfgQ~~y~g~~PN 549 (667)
T PF00305_consen 470 DYVNLYYKSDEAVANDTELQAWWNEIRTVGHGDKKDEGFPPKIKTRDELIDILTTIIFTASAQHAAVNFGQYDYYGFVPN 549 (667)
T ss_dssp HHHHHHSSSHHHHHT-HHHHHHHHHHHHTTTTGGTTGTTSSSSSSHHHHHHHHHHHHHHHTHHHHHHHTTHHHHHSSGGG
T ss_pred HhhhhhcCCcceeCcCHHHHHHHHHHhcccccCcCcCCCCCCCCCHHHHHHHHHHHeeecchhhhhhcccccceeeecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCChhH--HHhhhhchHHHHHhcCCChHHHHHHHHHHHHhcCCCCCCccccCCCCCCCCCcHHHHHHH
Q 002649 763 RPTVARTNLPNEDQTKEE--WKSFLEKPEAALLRCFPAQFQALTVMLVIDLLSTHSPDEEYLGKEMEPAWGDDPVIKAAF 840 (896)
Q Consensus 763 ~P~~~r~p~P~~kkg~~e--~~~~~~~pe~~~L~tlP~~~qa~~~m~~~~~LS~h~~de~yLG~~~~~~~~~d~~~~~a~ 840 (896)
+|++||+++|.+ +..+ |++|+++||+++|++||++.||+.+|+++++||+|++||+|||+|++..|+.|+++++|+
T Consensus 550 ~P~~~r~~~P~~--~~~~~~~~~l~~~~e~~~l~~LP~~~~a~~~~~~~~~LS~~~~de~~Lg~~~~~~w~~d~~~~~a~ 627 (667)
T PF00305_consen 550 RPTALRRPMPPP--TTKEVTYEELLKDPEKDFLSTLPSKQQALLQMAVLELLSRHSPDEEYLGQYPEPHWFSDPEAKAAF 627 (667)
T ss_dssp S-S-BSSSS--T--SSSH--HHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHTCB-TT--BTTT-SSTTSSSSHHHHHHH
T ss_pred CChhhcccCCCC--CcchhhhhhhccChHHHHHHhcCCHHHHHHHHHHHHHhccCCCCcccccCcCcccccccHHHHHHH
Confidence 999999999987 5555 999999999999999999999999999999999999999999999988899999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCccccccCCCccCCceeecCC
Q 002649 841 EEFNLKMQELERIIDDRNSNENLKNRTGAAIVPYELLKPF 880 (896)
Q Consensus 841 ~~F~~~L~~Ie~~I~~RN~~~~lknr~g~~~~PY~~L~Ps 880 (896)
++|+++|++||++|++||+++++|||+|||++||+||+||
T Consensus 628 ~~F~~~L~~ie~~I~~RN~~~~~~nr~g~~~~PY~~L~Ps 667 (667)
T PF00305_consen 628 ERFQEELKEIEEEIDERNKDRKLKNRNGPGKVPYTYLLPS 667 (667)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSSGGGTTTTT----TTSST
T ss_pred HHHHHHHHHHHHHHHHHhCCccccccCCCCCCCccccCCC
Confidence 9999999999999999999999999999999999999996
No 5
>cd01751 PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase related proteins. Lipoxygenases are nonheme, nonsulfur iron dioxygenases that act on lipid substrates containing one or more (Z,Z)-1,4-pentadiene moieties. In plants, the immediate products are involved in defense mechanisms against pathogens and may be precursors of metabolic regulators. The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.
Probab=100.00 E-value=1.4e-35 Score=288.28 Aligned_cols=130 Identities=37% Similarity=0.648 Sum_probs=118.7
Q ss_pred ceeeEEEEeecceeEeeeeEeeccccCCchhhhhccc-cEEEEEEecccCCCCCCcc----cccccccccCCCCCCCCce
Q 002649 56 SIKAIFNLTAEKSTKVKAVITVKPIVSDPLAVEKLIG-TLVLELVSAELDPETGKEK----PTIKSRAHRSLFTDDDGNL 130 (896)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g-~~~l~lvs~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 130 (896)
++||+|++|+++.+++++.. +. +|++.|++| +|+|||||+++||+||+|| ++|++|.++. +++ +
T Consensus 2 ~vka~V~v~~k~~~~~~~~~----~~--~D~~~~llGk~v~lqLVSs~~d~~tg~~k~~~~~~l~~~~~~~----~~e-~ 70 (137)
T cd01751 2 KVKATVTVMKKNKLDLNDDG----SG--LDDLDDLLGRSLLLELVSSELDPKTGKGKKGKAAFLEGWGKSL----AGE-S 70 (137)
T ss_pred EEEEEEEEEEeecccccccc----ch--hhhHHHhhCCeEEEEEEEeeecCCCCCcccccceeeecccccC----Ccc-e
Confidence 48999999999998888755 23 899999999 9999999999999999655 8999998654 344 6
Q ss_pred eEEEEEecCCCCCceeEEEEEeCCCCCeeEeEEEEeccCC-CcEEEecCCcccCCCCCCcceEEeeC
Q 002649 131 KYKTEFDVPSNFGEVGAILVEADQLTETFLKDIALDGLRN-GPVNIACDSWIQPKIVDKQKRIFFTN 196 (896)
Q Consensus 131 ~y~v~f~~~~~~G~pgai~v~n~~~~e~fl~~i~l~~~p~-g~~~F~c~sWv~~~~~~~~~riff~n 196 (896)
+|+++|+||++||+||||+|+|+|++||||++|+|+++|+ |+|||+|||||||+++|+++||||+|
T Consensus 71 ~y~~~F~v~~~fG~pGAi~V~N~h~~EffLksitLe~~p~~g~v~F~CNSWVyp~~~~~~~RiFFsN 137 (137)
T cd01751 71 AYEAEFEVPASFGPPGAVLVKNEHHSEFFLKSITLEGFGGSGTITFVCNSWVYPKKDYPDKRIFFPN 137 (137)
T ss_pred EEEEEEEeecccCCccEEEEEECCCceEEEEEEEEeCCCCCccEEEEccccCccCCCCCCCCEEccC
Confidence 9999999999999999999999999999999999999995 89999999999999999999999997
No 6
>smart00308 LH2 Lipoxygenase homology 2 (beta barrel) domain.
Probab=99.16 E-value=1.7e-10 Score=107.26 Aligned_cols=82 Identities=32% Similarity=0.564 Sum_probs=63.8
Q ss_pred cEEEEEEecccCCCCCCc-ccccccccccCCCCCCCCceeEEEEEecCCCCCceeEEEEEeCC-CCCeeEeEEEEeccCC
Q 002649 93 TLVLELVSAELDPETGKE-KPTIKSRAHRSLFTDDDGNLKYKTEFDVPSNFGEVGAILVEADQ-LTETFLKDIALDGLRN 170 (896)
Q Consensus 93 ~~~l~lvs~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~y~v~f~~~~~~G~pgai~v~n~~-~~e~fl~~i~l~~~p~ 170 (896)
+|.|+|++++.+ +|.. ...++.|. ...+ ..|+..|.++.++|++++|+|++++ ..+|||++|+|++.++
T Consensus 20 ~V~l~L~g~~~~--s~~~~~~~~~~~~-----f~~g--~~~~f~v~~~~~lG~l~~v~v~~d~~~~~w~l~~V~V~~~~~ 90 (105)
T smart00308 20 SVSLSLVGAEGD--GKESKLDYLFKGI-----FARG--STYEFTFDVDEDFGELGAVKIKNEHRHPEWFLKSITVKDLPT 90 (105)
T ss_pred eEEEEEEeCCCC--CcceeccccCCcc-----ccCC--ceEEEEEecccCCCCcEEEEEEeCCCCCCeEEEEEEEEECCC
Confidence 799999998765 3321 13344442 2334 3677777899999999999999999 8999999999987665
Q ss_pred C-cEEEecCCcccC
Q 002649 171 G-PVNIACDSWIQP 183 (896)
Q Consensus 171 g-~~~F~c~sWv~~ 183 (896)
| .++|+||+||++
T Consensus 91 ~~~~~F~c~~Wl~~ 104 (105)
T smart00308 91 GGKYHFPCNSWVYP 104 (105)
T ss_pred CCEEEEEcCceeCC
Confidence 5 899999999986
No 7
>PF01477 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxygenases (1.13.11.- from EC) are a class of iron-containing dioxygenases which catalyses the hydroperoxidation of lipids, containing a cis,cis-1,4-pentadiene structure. They are common in plants where they may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. In mammals a number of lipoxygenases isozymes are involved in the metabolism of prostaglandins and leukotrienes []. Sequence data is available for the following lipoxygenases: Plant lipoxygenases (1.13.11.12 from EC, IPR001246 from INTERPRO). Plants express a variety of cytosolic isozymes as well as what seems to be a chloroplast isozyme []. Mammalian arachidonate 5-lipoxygenase (1.13.11.34 from EC, IPR001885 from INTERPRO). Mammalian arachidonate 12-lipoxygenase (1.13.11.31 from EC, IPR001885 from INTERPRO). Mammalian erythroid cell-specific 15-lipoxygenase (1.13.11.33 from EC, IPR001885 from INTERPRO). The iron atom in lipoxygenases is bound by four ligands, three of which are histidine residues []. Six histidines are conserved in all lipoxygenase sequences, five of them are found clustered in a stretch of 40 amino acids. This region contains two of the three iron-ligands; the other histidines have been shown [] to be important for the activity of lipoxygenases. This entry represents a domain found in lipoxygenases and other enzymes. It is known as the PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology) domain, is found in a variety of membrane or lipid associated proteins. Structurally, this domain forms a beta-sandwich composed of two sheets of four strands each [, , ]. The most highly conserved regions coincide with the beta-strands, with most of the highly conserved residues being buried within the protein. An exception to this is a surface lysine or arginine that occurs on the surface of the fifth beta-strand of the eukaryotic domains. In pancreatic lipase, the lysine in this position forms a salt bridge with the procolipase protein. The conservation of a charged surface residue may indicate the location of a conserved ligand-binding site. It is thought that this domain may mediate membrane attachment via other protein binding partners.; GO: 0005515 protein binding; PDB: 3FG3_D 3FG1_C 3FG4_D 3DY5_A 2FNQ_B 3O8Y_B 3V99_B 3V92_A 3V98_B 1HPL_A ....
Probab=98.77 E-value=1.7e-08 Score=94.16 Aligned_cols=64 Identities=22% Similarity=0.515 Sum_probs=56.2
Q ss_pred eEEEEEecCCCCCceeEEEEEeC---CCCCeeEeEEEEeccCCC-cEEEecCCcccCCCCCCcceEEe
Q 002649 131 KYKTEFDVPSNFGEVGAILVEAD---QLTETFLKDIALDGLRNG-PVNIACDSWIQPKIVDKQKRIFF 194 (896)
Q Consensus 131 ~y~v~f~~~~~~G~pgai~v~n~---~~~e~fl~~i~l~~~p~g-~~~F~c~sWv~~~~~~~~~riff 194 (896)
..+..|.++.++|+|.+|.|.++ ....|||++|+|...+.| .+.|+||+||....+++.+||||
T Consensus 46 ~d~F~i~~~~~lG~i~~i~i~~~~~~~~~~W~l~~V~V~~~~~~~~~~F~~~~Wl~~~~~~~~~rvf~ 113 (113)
T PF01477_consen 46 TDTFTIETPEDLGEIQKIRIWHDGSGPSPSWYLDSVVVTDGETGRTYTFPCNRWLDPDKDYKTERVFF 113 (113)
T ss_dssp EEEEEEEESSCGCSEEEEEEEEESSSSSSEEEEEEEEEEETTTSEEEEEEEEEEESTTEGCSSEEEEE
T ss_pred eEEeeeeecccCCCCcEEEEEEccCCCccceEEEEEEEEeCCCCcEEEEEcCCEECCCCCCCCccEEC
Confidence 44445567789999999999999 679999999999876666 89999999999999999999998
No 8
>cd00113 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates.
Probab=98.53 E-value=2.7e-07 Score=87.18 Aligned_cols=64 Identities=11% Similarity=0.204 Sum_probs=54.1
Q ss_pred eEEEEEecCCCCCceeEEEEEeCCCC---CeeEeEEEEeccCCC-cEEEecCCcccCCCCCCcceEEe
Q 002649 131 KYKTEFDVPSNFGEVGAILVEADQLT---ETFLKDIALDGLRNG-PVNIACDSWIQPKIVDKQKRIFF 194 (896)
Q Consensus 131 ~y~v~f~~~~~~G~pgai~v~n~~~~---e~fl~~i~l~~~p~g-~~~F~c~sWv~~~~~~~~~riff 194 (896)
.++..|.++.++|++.+|.|++++.. +|||++|+|.+...| .++|+||+||.....++.+|+|.
T Consensus 49 ~~~f~v~~~~~lG~i~~v~l~~d~~g~~~~W~l~~V~V~~~~~~~~~~F~~~~Wl~~~~~~~~~r~~~ 116 (116)
T cd00113 49 TDTFQIDLKLDIGDITKVYLRRDGSGLSDGWYCESITVQALGTKKVYTFPVNRWVLGGKWYTSVRSLK 116 (116)
T ss_pred ceEEEEeccCCCcCeEEEEEEECCCCCCCCEEEeEEEEEeCCCCCEEEEEeCCCcccCCCCCceeecC
Confidence 44445567789999999999999875 999999999876665 89999999999988888888863
No 9
>cd02899 PLAT_SR Scavenger receptor protein. A subfamily of PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates. This subfamily contains Toxoplasma gondii Scavenger protein TgSR1.
Probab=98.27 E-value=3.6e-06 Score=80.04 Aligned_cols=77 Identities=12% Similarity=0.229 Sum_probs=55.8
Q ss_pred cEEEEEEecccCCCCCCcccccccccccCCCCCCCCceeEEEEEecCCCCCceeEEEEEeCC-CCCeeEeEEEEeccCCC
Q 002649 93 TLVLELVSAELDPETGKEKPTIKSRAHRSLFTDDDGNLKYKTEFDVPSNFGEVGAILVEADQ-LTETFLKDIALDGLRNG 171 (896)
Q Consensus 93 ~~~l~lvs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~f~~~~~~G~pgai~v~n~~-~~e~fl~~i~l~~~p~g 171 (896)
+|.|+||-++- .++ +..|.+ ....|...+|.| . +.++|++-.|+|.|.. .+.|||+.|+|++ |.|
T Consensus 20 ~V~i~L~G~~g--~S~--~~~L~~------~F~~G~~d~F~v--~-~~dLG~l~~i~l~n~g~~~~Wf~~~V~V~~-~~g 85 (109)
T cd02899 20 TIEITLLGSSG--RSN--PKTLSQ------GFYPGSLKRIRF--R-AADVGDINAIILSNTALNDPWYCDYVRIKS-EDG 85 (109)
T ss_pred eEEEEEEECCC--CcC--CEEccC------ccCCCceEEEEE--C-ccccCceEEEEEECCCCCCCceeeEEEEEC-CCC
Confidence 69999996643 222 222322 122332247766 4 7999999999998877 5899999999986 866
Q ss_pred -cEEEecCCcccC
Q 002649 172 -PVNIACDSWIQP 183 (896)
Q Consensus 172 -~~~F~c~sWv~~ 183 (896)
.++||||+|+..
T Consensus 86 ~~~~Fpc~rWla~ 98 (109)
T cd02899 86 KVFAFNVKRWIGY 98 (109)
T ss_pred CEEEEEcceeeCC
Confidence 888999999975
No 10
>cd01753 PLAT_LOX PLAT domain of 12/15-lipoxygenase. As a unique subfamily of the mammalian lipoxygenases, they catalyze enzymatic lipid peroxidation in complex biological structures via direct dioxygenation of phospholipids and cholesterol esters of biomembranes and plasma lipoproteins. Both types of enzymes are cytosolic but need this domain to access their sequestered membrane or micelle bound substrates.
Probab=97.83 E-value=0.00011 Score=70.37 Aligned_cols=83 Identities=20% Similarity=0.341 Sum_probs=57.4
Q ss_pred cEEEEEEecccCCCCCCcccccccccccCCCCCCCCceeEEEEEecCCCCCceeEEEEEeCC---CCCeeEeEEEEeccC
Q 002649 93 TLVLELVSAELDPETGKEKPTIKSRAHRSLFTDDDGNLKYKTEFDVPSNFGEVGAILVEADQ---LTETFLKDIALDGLR 169 (896)
Q Consensus 93 ~~~l~lvs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~f~~~~~~G~pgai~v~n~~---~~e~fl~~i~l~~~p 169 (896)
+|.|+|+-++-+ ++ .-.|..... . ...+...+|.+ .++.++|++-.|.|..+. ...|||+.|+|++ +
T Consensus 20 ~V~i~l~G~~g~--S~--~~~L~~~~~--~-FerG~~d~F~v--~~~~~lG~l~~i~i~~d~~g~~~~W~l~~V~V~~-~ 89 (113)
T cd01753 20 YIYLTLVGTAGE--SE--KQLLDRPGY--D-FERGAVDEYKV--KVPEDLGELLLVRLRKRKYLLFDAWFCNYITVTG-P 89 (113)
T ss_pred EEEEEEEECCCc--cc--CEEcCCCCC--c-cCCCCeeEEEE--ecccCCCCcEEEEEEECCCCCCCCeeecEEEEEc-C
Confidence 688999865542 22 222332111 1 23333235655 578899999999999987 4899999999986 4
Q ss_pred CC-cEEEecCCcccCCC
Q 002649 170 NG-PVNIACDSWIQPKI 185 (896)
Q Consensus 170 ~g-~~~F~c~sWv~~~~ 185 (896)
.| .++||||+|+....
T Consensus 90 ~~~~~~F~c~rWl~~~~ 106 (113)
T cd01753 90 GGDEYHFPCYRWIEGYG 106 (113)
T ss_pred CCCEEEEEhHHeECCCC
Confidence 36 89999999998754
No 11
>cd01757 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 interacting protein 1 (Rab6IP1)_like family. PLAT/LH2 domains consists of an eight stranded beta-barrel. In RabIP1 this domain may participate in lipid-mediated modulation of Rab6IP1's function via it's generally proposed function of mediating interaction with lipids or membrane bound proteins.
Probab=97.79 E-value=7.1e-05 Score=71.85 Aligned_cols=47 Identities=15% Similarity=0.436 Sum_probs=41.7
Q ss_pred CCCCceeEEEEEeCC---CCCeeEeEEEEeccCCC-cEEEecCCcccCCCC
Q 002649 140 SNFGEVGAILVEADQ---LTETFLKDIALDGLRNG-PVNIACDSWIQPKIV 186 (896)
Q Consensus 140 ~~~G~pgai~v~n~~---~~e~fl~~i~l~~~p~g-~~~F~c~sWv~~~~~ 186 (896)
.++|++-.|+|..+. ...|||+.|.|++.+.| .++||||+|+...+.
T Consensus 50 ~~LG~L~~irIwHDnsG~~~~Wfl~~V~V~d~~t~~~~~FpC~rWLa~~~~ 100 (114)
T cd01757 50 QNLGKLTTVQIGHDNSGLLAKWLVEYVMVRNEITGHTYKFPCGRWLGEGVD 100 (114)
T ss_pred CCcCCcEEEEEEECCCCCCCCeeeeEEEEEeCCCCCEEEEecCceecCCCC
Confidence 999999999999987 48999999999987766 899999999987653
No 12
>cd01756 PLAT_repeat PLAT/LH2 domain repeats of family of proteins with unknown function. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=97.78 E-value=0.00025 Score=68.15 Aligned_cols=94 Identities=15% Similarity=0.302 Sum_probs=61.7
Q ss_pred cEEEEEEecccCCCCCCcccccccccccCCCCCCCCceeEEEEEecCCCCCceeEEEEEeCCC---CCeeEeEEEEeccC
Q 002649 93 TLVLELVSAELDPETGKEKPTIKSRAHRSLFTDDDGNLKYKTEFDVPSNFGEVGAILVEADQL---TETFLKDIALDGLR 169 (896)
Q Consensus 93 ~~~l~lvs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~f~~~~~~G~pgai~v~n~~~---~e~fl~~i~l~~~p 169 (896)
.|.|+|+-+.- . .++-.|..+. .......+...+|.++ . .++|++-.|.|..+.. ..|||+.|+|.+..
T Consensus 20 ~V~i~L~G~~g--~--s~~~~L~~~~-~~~~FerGs~d~F~i~--~-~~lG~l~~i~i~~d~~g~~~~W~~~~V~V~~~~ 91 (120)
T cd01756 20 NVFITLYGENG--D--TGKRKLKKSN-NKNKFERGQTDKFTVE--A-VDLGKLKKIRIGHDNSGLGAGWFLDKVEIREPG 91 (120)
T ss_pred EEEEEEEeCCC--c--cccEEccCCC-cCCcccCCCeEEEEEE--e-cCCCCeEEEEEEECCCCCCCCcEEeEEEEEECC
Confidence 68888885332 1 2234455431 1122333432467664 5 7999999999999874 79999999998655
Q ss_pred CC-cEEEecCCcccCCCC-CCcceEEe
Q 002649 170 NG-PVNIACDSWIQPKIV-DKQKRIFF 194 (896)
Q Consensus 170 ~g-~~~F~c~sWv~~~~~-~~~~riff 194 (896)
.| ..+||||+|+...+. ..-.|++.
T Consensus 92 ~~~~~~F~~~~Wl~~~~~dg~~~r~~~ 118 (120)
T cd01756 92 TGDEYTFPCNRWLDKDEDDGQIVRELY 118 (120)
T ss_pred CceEEEEEeCCccCCCCCCCEEEEEEE
Confidence 56 899999999987653 22245554
No 13
>cd01752 PLAT_polycystin PLAT/LH2 domain of polycystin-1 like proteins. Polycystins are a large family of membrane proteins composed of multiple domains, present in fish, invertebrates, mammals, and humans that are widely expressed in various cell types and whose biological functions remain poorly defined. In human, mutations in polycystin-1 (PKD1) and polycystin-2 (PKD2) have been shown to be the cause for autosomal dominant polycystic kidney disease (ADPKD). The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.
Probab=97.60 E-value=0.00048 Score=66.31 Aligned_cols=85 Identities=16% Similarity=0.302 Sum_probs=57.0
Q ss_pred cEEEEEEecccCCCCCCcccccccccccCCCCCCCCceeEEEEEecCCCCCceeEEEEEeCC---CCCeeEeEEEEeccC
Q 002649 93 TLVLELVSAELDPETGKEKPTIKSRAHRSLFTDDDGNLKYKTEFDVPSNFGEVGAILVEADQ---LTETFLKDIALDGLR 169 (896)
Q Consensus 93 ~~~l~lvs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~f~~~~~~G~pgai~v~n~~---~~e~fl~~i~l~~~p 169 (896)
+|.|+|+.+.-+ + ++-.|..... .....+. .++..+..+.++|++-.|.|..+. ...|||++|+|.+..
T Consensus 20 ~V~i~L~G~~g~--s--~~~~L~~~~~--~~F~rG~--~~~f~i~~~~dlG~l~~i~l~hd~~g~~~~W~l~~V~V~~~~ 91 (120)
T cd01752 20 KVTITLYGAEGE--S--EPHHLRDPEK--PIFERGS--VDSFLLTTPFPLGELQSIRLWHDNSGLSPSWYLSRVIVRDLQ 91 (120)
T ss_pred EEEEEEEeCCCC--c--ccEEcCCCCc--cceeCCC--eeEEEecCccCCCCccEEEEEECCCCCCCCeEEEEEEEEECC
Confidence 688888865532 2 1223332211 1233333 333344567899999999998876 489999999998644
Q ss_pred CC-cEEEecCCcccCCC
Q 002649 170 NG-PVNIACDSWIQPKI 185 (896)
Q Consensus 170 ~g-~~~F~c~sWv~~~~ 185 (896)
.| ...||||+|+...+
T Consensus 92 t~~~~~F~~~rWl~~~~ 108 (120)
T cd01752 92 TGKKWFFLCNDWLSVEE 108 (120)
T ss_pred CCcEEEEEeCcEECCcC
Confidence 45 88999999998764
No 14
>cd01754 PLAT_plant_stress PLAT/LH2 domain of plant-specific single domain protein family with unknown function. Many of its members are stress induced. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=97.30 E-value=0.0008 Score=66.03 Aligned_cols=55 Identities=7% Similarity=0.083 Sum_probs=45.1
Q ss_pred eeEEEEEecCCCCCceeEEEEEeCC---CCCeeEeEEEEeccCC---C-cEEEecCCcccCCCC
Q 002649 130 LKYKTEFDVPSNFGEVGAILVEADQ---LTETFLKDIALDGLRN---G-PVNIACDSWIQPKIV 186 (896)
Q Consensus 130 ~~y~v~f~~~~~~G~pgai~v~n~~---~~e~fl~~i~l~~~p~---g-~~~F~c~sWv~~~~~ 186 (896)
.+|.|+ .+.++|++-.|+|..+. ...|||+.|+|++... + .++||||+|+...+.
T Consensus 58 d~F~v~--~~~~lG~l~~irI~HDn~G~~p~W~l~~V~V~d~~~~~~~~~~~F~c~rWLa~d~~ 119 (129)
T cd01754 58 DRFSGR--GPCLPSPPCWMNLTSDGTGNHPGWYVNYVEVTQAGQHAPCMQHLFAVEQWLATDES 119 (129)
T ss_pred cEEEEE--eccCCCCeEEEEEEECCCCCCCCcccCEEEEEeCCCCCcCcEEEEEecEeccCCCC
Confidence 478774 67889999999999877 4899999999986543 2 799999999976653
No 15
>cd01755 PLAT_lipase PLAT/ LH2 domain present in connection with a lipase domain. This family contains two major subgroups, the lipoprotein lipase (LPL) and the pancreatic triglyceride lipase. LPL is a key enzyme in catabolism of plasma lipoprotein triglycerides (TGs). The central role of triglyceride lipases is in energy production. In general, PLAT/LH2 domain's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=45.79 E-value=86 Score=30.42 Aligned_cols=50 Identities=10% Similarity=0.109 Sum_probs=40.1
Q ss_pred eeEEEEEecCCCCCceeEEEEEeCCC----------CCeeEeEEEEeccCCCcEEEecCC
Q 002649 130 LKYKTEFDVPSNFGEVGAILVEADQL----------TETFLKDIALDGLRNGPVNIACDS 179 (896)
Q Consensus 130 ~~y~v~f~~~~~~G~pgai~v~n~~~----------~e~fl~~i~l~~~p~g~~~F~c~s 179 (896)
..|+.-+..+.++|++-.|.++-+.. ..||++.|+|++..++.-..-|.+
T Consensus 46 ~~~sfli~t~~~lG~l~~v~~~~dn~~~~~~~~~~~p~~~~~~I~Vq~get~~~~~FC~~ 105 (120)
T cd01755 46 KTYSFLIDTEVDIGDLLKVKFKWENNVINSNSGETLPKLGARKIRVKSGETQKKFTFCSQ 105 (120)
T ss_pred CEEEEEEEcCCCccceEEEEEEEcCCCcccccccCCCcEEEEEEEEEECCCCCEEEEECC
Confidence 36776667899999999999986553 489999999987777766667877
No 16
>KOG2080 consensus Uncharacterized conserved protein, contains DENN and RUN domains [Signal transduction mechanisms]
Probab=40.50 E-value=14 Score=46.31 Aligned_cols=52 Identities=19% Similarity=0.372 Sum_probs=38.6
Q ss_pred EEEEecCCCCCceeEEEEEeCC---CCCeeEeEEEEeccCCC-cEEEecCCcccCCC
Q 002649 133 KTEFDVPSNFGEVGAILVEADQ---LTETFLKDIALDGLRNG-PVNIACDSWIQPKI 185 (896)
Q Consensus 133 ~v~f~~~~~~G~pgai~v~n~~---~~e~fl~~i~l~~~p~g-~~~F~c~sWv~~~~ 185 (896)
+.+|++ .++|..--++|-.+. ...||++.|.|..--.| ++.|||++|.-+..
T Consensus 1014 ~f~F~~-kNLG~LtT~rIGHdnS~~~~kW~vEyV~vRNEiTG~TYKFPCGrw~G~ge 1069 (1295)
T KOG2080|consen 1014 LFKFDH-KNLGILSTLRIGHQQSEKPVQWFLEYVLVRNEITGQTYKFPCGRWFGNGE 1069 (1295)
T ss_pred eeEEec-cccceeeeEEecccCCCcchHHHHHHhhhhceeccceeccccccccCCcc
Confidence 345544 789999988886554 36899999987532256 99999999987654
No 17
>PF07157 DNA_circ_N: DNA circularisation protein N-terminus; InterPro: IPR009826 This entry represents the N terminus (approximately 100 residues) of a number of phage DNA circulation proteins.
Probab=31.07 E-value=14 Score=34.70 Aligned_cols=69 Identities=25% Similarity=0.621 Sum_probs=45.5
Q ss_pred cCCC--CCCCCCCCccccCcCCCCcchhhHHHHHHHHHHHHHh--------ccccccccccccCcHHHHHHHHHHHhccc
Q 002649 644 RGIA--VEDPKAPHGLKLNIEDYPYANDGLDLWDALKQWVTNY--------VNHYYPDPSLVESDEELQAWWTEIRTVGH 713 (896)
Q Consensus 644 RGva--~~D~~~~hgl~l~l~dYpYrdDGL~IW~AI~~~V~~y--------v~~YY~~D~~V~~D~ELQaW~~Ei~~~G~ 713 (896)
|||. +.+.+...|=++....|||+|.+ ||+|. ++.|.-.|+ -+..++++.+-+.+.|-
T Consensus 11 RGVpF~v~~~~~~~gRr~~~heyP~rd~~---------~vEDlG~~~r~~~~~a~~~G~d---y~~~~~~L~~al~~~G~ 78 (93)
T PF07157_consen 11 RGVPFDVESTDDSGGRRLAVHEYPYRDGP---------WVEDLGRKARRIRVTAFFVGDD---YEAQRDALIAALEAPGP 78 (93)
T ss_pred CCeeEEEEEcccCCCcEEEEEecCCCCCc---------CeeecCCCCcEEEEEEEEECCc---HHHHHHHHHHHHcCCCC
Confidence 5544 44445566777889999999887 66654 233332222 13667888888888888
Q ss_pred CCCCCCCCCCCC
Q 002649 714 AEKKDEPWWPVL 725 (896)
Q Consensus 714 ~d~kd~p~~P~l 725 (896)
|.+-. |||..+
T Consensus 79 G~LvH-P~~G~~ 89 (93)
T PF07157_consen 79 GELVH-PWFGSM 89 (93)
T ss_pred eEEec-CCCceE
Confidence 87765 777654
No 18
>PF10474 DUF2451: Protein of unknown function C-terminus (DUF2451); InterPro: IPR019514 This protein is found in eukaryotes but its function is not known. The N-terminal domain of some members is PF10475 from PFAM (DUF2450).
Probab=25.82 E-value=43 Score=36.36 Aligned_cols=24 Identities=38% Similarity=0.936 Sum_probs=20.4
Q ss_pred HHHHHHhccccccccccccCcHHHHHHHHH
Q 002649 678 KQWVTNYVNHYYPDPSLVESDEELQAWWTE 707 (896)
Q Consensus 678 ~~~V~~yv~~YY~~D~~V~~D~ELQaW~~E 707 (896)
.+||..||+.|| ..+.|+..|+++
T Consensus 178 ~~~Ve~YIKAyY------l~e~e~~~W~~~ 201 (234)
T PF10474_consen 178 REYVENYIKAYY------LPEEELEEWIRT 201 (234)
T ss_pred HHHHHHHHHHHc------CCHHHHHHHHHh
Confidence 579999999999 345799999986
No 19
>PF10281 Ish1: Putative stress-responsive nuclear envelope protein; InterPro: IPR018803 This group of proteins, found primarily in fungi, consists of putative stress-responsive nuclear envelope protein Ish1 and homologues [].
Probab=24.74 E-value=1.1e+02 Score=23.69 Aligned_cols=31 Identities=26% Similarity=0.503 Sum_probs=20.9
Q ss_pred CcHHHHHHHHHHHhcccCCCCCCCCCCCCCChhHHHHHHh
Q 002649 697 SDEELQAWWTEIRTVGHAEKKDEPWWPVLKTPQDLIEIIT 736 (896)
Q Consensus 697 ~D~ELQaW~~Ei~~~G~~d~kd~p~~P~l~T~~~Li~~lT 736 (896)
.|.+|+.|..+ ||-... +...|+++|++.+-
T Consensus 5 s~~~L~~wL~~-----~gi~~~----~~~~~rd~Ll~~~k 35 (38)
T PF10281_consen 5 SDSDLKSWLKS-----HGIPVP----KSAKTRDELLKLAK 35 (38)
T ss_pred CHHHHHHHHHH-----cCCCCC----CCCCCHHHHHHHHH
Confidence 46899999987 432222 12269999998763
No 20
>PF12588 PSDC: Phophatidylserine decarboxylase ; InterPro: IPR022237 This domain family is found in bacteria and eukaryotes, and is approximately 140 amino acids in length. The family is found in association with PF02666 from PFAM. Phosphatidylserine decarboxylase (PSD) is an important enzyme in the synthesis of phosphatidylethanolamine in both prokaryotes and eukaryotes.
Probab=20.62 E-value=1.5e+02 Score=30.05 Aligned_cols=49 Identities=20% Similarity=0.311 Sum_probs=38.7
Q ss_pred ccccCcHHHHHHHHHHHhcccCCCCCCCCCC-CCCChhHHHHHHhhhhccc
Q 002649 693 SLVESDEELQAWWTEIRTVGHAEKKDEPWWP-VLKTPQDLIEIITTIAWVA 742 (896)
Q Consensus 693 ~~V~~D~ELQaW~~Ei~~~G~~d~kd~p~~P-~l~T~~~Li~~lT~iI~~a 742 (896)
+-|.+|++|..+.+++.++ ....++..|.| .+++.++|..++-.||-+|
T Consensus 10 ~lIe~dp~l~ml~~~Mf~q-~~~~~~p~g~~~~i~~~~~mL~~ln~i~t~A 59 (141)
T PF12588_consen 10 DLIESDPRLYMLFTQMFDQ-PPYNADPTGNPPQIRDYDEMLQLLNHIMTTA 59 (141)
T ss_pred HHHhcCHHHHHHHHHHHhC-cccccCCCCCccccccHHHHHHHHHHHHhhC
Confidence 3468999999999999987 32233444677 8999999999999999654
Done!