Query         002649
Match_columns 896
No_of_seqs    271 out of 677
Neff          5.2 
Searched_HMMs 29240
Date          Tue Mar 26 17:20:36 2013
Command       hhsearch -i /local_scratch/syshi/lefta3m/002649.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1365-1369//hhsearch_pdb/002649hhsearch_pdb 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2iuk_A SEED lipoxygenase; iron   1.0       1       1 2121.3  59.0  826   55-896     9-864 (864)
  2 2iuj_A Lipoxygenase L-5; dioxy   1.0       1       1 2088.8  60.2  824   55-896     9-853 (853)
  3 1f8n_A Lipoxygenase-1; dioxyge   1.0       1       1 2084.7  57.4  821   55-896     6-839 (839)
  4 1lox_A 15-lipoxygenase, 15LOX;   1.0       1       1 1406.6  40.4  632   93-896    20-662 (662)
  5 3dy5_A Allene oxide synthase-l   1.0       1       1 1343.2  44.6  644   93-896   393-1066(1066)
  6 3v98_A Arachidonate 5-lipoxyge   1.0       1       1 1339.4  48.4  639   93-896    41-691 (691)
  7 3fg1_A Allene oxide synthase-l   1.0       1       1 1330.5  47.6  641   93-896    26-696 (696)
  8 3vf1_A 11R-lipoxygenase; LOX,    1.0       1       1 1314.4  47.4  637   93-896    39-698 (698)
  9 3rde_A Arachidonate 12-lipoxyg   1.0       1       1 1261.0  28.2  552  191-896    17-573 (573)
 10 3d3l_A Arachidonate 12-lipoxyg   1.0       1       1 1153.3  25.6  494  298-896    13-509 (541)

No 1  
>2iuk_A SEED lipoxygenase; iron, dioxygenase, metal-binding, oxidoreductase, oxylipin biosynthesis, soybean lipoxygenase-D, fatty acid biosynthesis; 2.4A {Glycine max}
Probab=1.00  E-value=1  Score=2121.35  Aligned_cols=826  Identities=44%  Similarity=0.786  Sum_probs=782.3

Q ss_pred             CCEEEEEEEEECCEEEEEEEEEECCC-----------------CCCCHHHHHCCC-CEEEEEEECCCCCCCCCCC----C
Q ss_conf             73116998741112576536852545-----------------578123330025-3799998510179988844----3
Q 002649           55 NSIKAIFNLTAEKSTKVKAVITVKPI-----------------VSDPLAVEKLIG-TLVLELVSAELDPETGKEK----P  112 (896)
Q Consensus        55 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~d~~~~~~g-~v~l~lvS~~~~~~~~~~~----~  112 (896)
                      .++||+|++|+++++++++..+++..                 ...+|++++++| +|+|||||+++||+||+||    +
T Consensus         9 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~lqlvs~~~~~~~~~~k~~~~~   88 (864)
T 2iuk_A            9 QKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLGRNISMQLISATQTDGSGNGKVGKEV   88 (864)
T ss_dssp             CCEEEEEEEEEGGGSCHHHHTTC-----------------------CCSGGGSCSTTEEEEEEEEEEECSSSCEEEEEEE
T ss_pred             CEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCC
T ss_conf             77899999986463565663323445543333321233444444201447775068079999965137999987678756


Q ss_pred             CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCCEEEEEEEEECCCC-CCEEEECCCCCCCCCCCCCCE
Q ss_conf             1034544578779997226999983579989616999996799972572899800489-838973177645897797642
Q 002649          113 TIKSRAHRSLFTDDDGNLKYKTEFDVPSNFGEVGAILVEADQLTETFLKDIALDGLRN-GPVNIACDSWIQPKIVDKQKR  191 (896)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~~~~e~fl~~i~l~~~p~-g~~~F~c~sWv~~~~~~~~~r  191 (896)
                      +|++|+.+.....+++ ++|+++|.||++||+||||+|+|+|++||||++|+|+++|+ |.+||+||||||+.++|+.+|
T Consensus        89 ~~~~~~~~~~~~~~~~-~~~~~~f~~~~~fg~pgA~~v~n~~~~e~~l~~~~l~~~~~~~~~~f~cnswv~~~~~~~~~R  167 (864)
T 2iuk_A           89 YLEKHLPTLPTLGARQ-DAFSIFFEWDASFGIPGAFYIKNFMTDEFFLVSVKLEDIPNHGTIEFVCNSWVYNFRSYKKNR  167 (864)
T ss_dssp             ECCEEECSCSSCCTTC-EEEEEEECCCSTTCCEEEEEEEECSSSCEEEEEEEEECCSSSCCEEEEEEEEECBGGGSSSCE
T ss_pred             CCCCCCCCCCCCCCCC-EEEEEEEEEECCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCC
T ss_conf             0014356898687772-799999984056798635998837987148988998137899868985376306788899884


Q ss_pred             EEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCC
Q ss_conf             883073015689975768999999996408998764345715414344579999866787875556789-9899998667
Q 002649          192 IFFTNKSYLPSQTPNGLARLRAEELNNLQGDGQGERKIHERIYDYDVYNDLGMPDSILKSDLVRPVLGG-KEHPYPRRCR  270 (896)
Q Consensus       192 iff~n~~yLp~~tp~~l~~~R~~EL~~lrg~g~g~r~~~driYdy~~yndlG~Pd~~~~~~~~rpvlgg-~~~pyPrr~r  270 (896)
                      |||+||+|||++||++|+++|++||++|||||+||||+||||||||||||||+||+  +++  |||||| ++||||||||
T Consensus       168 ifF~n~~ylp~~tp~~l~~~R~~el~~lrg~g~g~rk~~driydyd~yndlg~pd~--~~~--rpvlggs~~~pyPrR~r  243 (864)
T 2iuk_A          168 IFFVNDTYLPSATPAPLLKYRKEEFEVLRGDGTGKRKDFDRIYDYDVYNDLGNPDG--GDP--RPILGGCSIYPYPLRVR  243 (864)
T ss_dssp             EEEBSCCCCTTTSCGGGHHHHHHHHHHHHCCSCSCCCTTCCCCCEECBCCSCBGGG--TBC--CCCBSSSSSSCCCCEEC
T ss_pred             EECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCC--CCC--CCCCCCCCCCCCCCCCC
T ss_conf             66268874864476889999999999853789876650463010345403789666--888--86368988888986555


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHC--CCCCCCCCHHHHHHHHCCCCC
Q ss_conf             899999999998775587855988777700001100001688774345668888604--889999998899987216988
Q 002649          271 TGHPKSSKDPASESWSLSVYVPRDEAFSLLKTAQFSATGVYSALHAVIPFVESILRI--GKDKGFPSLEAIDKLFNEGVE  348 (896)
Q Consensus       271 tgr~~~~~d~~~e~~~~~~yvPrDE~F~~~K~~~F~~~~~k~~~~~~~p~l~~~~~~--~~~~~f~~f~di~~ly~~~~~  348 (896)
                      |||+|+++||.+|||.. +||||||+|++.|.++|.++++++++|.++|.+++++++  .+..+|++|+||++||++|++
T Consensus       244 tgr~~~~~dp~~e~~~~-~yvPrDe~F~~~K~~~f~~~~~k~~~~~~~p~l~~~~~~~~~~~~~f~sf~di~~ly~~g~~  322 (864)
T 2iuk_A          244 TGRERTRTDPNSEKPGE-VYVPRDENFGHLKSSDFLTYGIKSLSHDVIPLFKSAIFQLRVTSSEFESFEDVRSLYEGGIK  322 (864)
T ss_dssp             CCCCBCSSCTTSBCCCC-CCCCGGGSCCCSSGGGCHHHHHHHHHHTTHHHHHHHHHSSCSSCSSCCSHHHHHTTTSSCEE
T ss_pred             CCCCCCCCCCCCCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCC
T ss_conf             79898888987445466-77898756572238888788899999877999998841235676778999999999855666


Q ss_pred             CCCCCCCCCCCCCC--CHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99754466310010--0122322124676422335710011142255250899977740899521002457998999998
Q 002649          349 LPPEIEKLPSWLKI--LPNFFKSIANTGKDILRFETPETLKRDKLFWLRDEEFGRETLAGLNPYGISLVADWPLKSTLDP  426 (896)
Q Consensus       349 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~fp~P~~~~~~~~~W~~DeeFarQ~LaG~NP~~Irr~~e~P~~s~Ldp  426 (896)
                      +| ..    .++++  ++.+++.++++++.+++||+|++++.|+++|++|+|||||+|||+||++|+||++||++|+|||
T Consensus       323 l~-~~----~~~~~~p~~~~~~~~~~~~e~~lk~p~P~vi~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~s~ldp  397 (864)
T 2iuk_A          323 LP-TD----ILSQISPLPALKEIFRTDGENVLQFPPPHVAKVSKSGVMTDEEFAREVIAGVNPNVIRRLQEFPPKSTLDP  397 (864)
T ss_dssp             CC-HH----HHHHHSSCTTTTTTCBCTTSSEEBCCCCSSCSCSSSSSSCHHHHHHHHHHSSSCSCCEECSSSSCCCCSCH
T ss_pred             CC-HH----HHCCCCCHHHHHHHHHCCCCCHHCCCCCCEECCCCHHHHCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCH
T ss_conf             71-34----42134749999998640331000279964202550111164999999861889555430010697344775


Q ss_pred             CCCCCCCCCCCHHHHHHHHCCCCCHHHHHHCCCEEEEECCCCCCCCHHCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEE
Q ss_conf             88799876232999997508976399998569588960552136100001378885110120279648999434589994
Q 002649          427 ETYGPTESAITKELIEKEIGGSMTVEEAIKQKKLFIIDYHDALLPYVEKVRQIKDTTLYGSRTVFFLNPDGTLRPLAIEL  506 (896)
Q Consensus       427 ~~yg~~~s~It~e~i~~~l~g~~tl~~al~~grLFi~Dy~d~~lp~l~~in~~~g~~~YA~~~Lffl~~dG~L~PIAIqL  506 (896)
                      ++||+++|+||++||+..++| +||++|+++|||||+||||++|||+.++|.++++++|||+||||++++|+|+||||||
T Consensus       398 ~~yg~~~s~it~e~i~~~l~g-~tl~eal~~grLFi~Dy~d~~lp~l~~in~~~~~~~YAp~~Lffl~~dG~L~PlAIqL  476 (864)
T 2iuk_A          398 TLYGDQTSTITKEQLEINMGG-VTVEEALSTQRLFILDYQDAFIPYLTRINSLPTAKAYATRTILFLKDDGTLKPLAIEL  476 (864)
T ss_dssp             HHHCCCCCCCCHHHHGGGTTT-CCHHHHHHTTCEEEEECHHHHGGGHHHHHTSTTCCCCEEEEEEEECTTSCEEEEEEEE
T ss_pred             HHCCCCCCCCCHHHHHHCCCC-CCHHHHHHCCCEEEECCHHHHCCCHHHCCCCCCCEEECCEEEEEECCCCCEEEEEEEE
T ss_conf             441785563679999611378-7699998669879954504306411321567886202355789986899776799995


Q ss_pred             CCCCCCCCC--CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHCC
Q ss_conf             079999999--985245189999998227899999998332235688886521022114689977044687683223023
Q 002649          507 TRPPMDGKP--QWKQVFTPSTGNSTESWLWRLAKAHVLAHDSGYHQLISHWLRTHCCVEPYVIATNRRLSAMHPINRLLK  584 (896)
Q Consensus       507 ~~p~~~~~~--~~~~VfTP~d~~~~~~~~W~LAK~~v~~aD~~~HqlvsHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~  584 (896)
                      ++|++++++  +.++||||+| +++++|.|+|||+||++||+++||+++||++||+++|||+|||+||||.+|||||||.
T Consensus       477 s~p~~~~~~~~~~~~VftP~d-d~~~~~~W~LAK~~v~~aD~~~HqlisHll~THlv~Epf~IAt~RqLs~~HPI~kLL~  555 (864)
T 2iuk_A          477 SKPHPDGDNLGPESIVVLPAT-EGVDSTIWLLAKAHVIVNDSGYHQLVSHWLNTHAVMEPFAIATNRHLSVLHPIYKLLY  555 (864)
T ss_dssp             EECCSSSSSSCCEEEEECCCS-SSSHHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHHHHHHHHHSCTTCHHHHHHG
T ss_pred             ECCCCCCCCCCCCCCEECCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
T ss_conf             279887666677888589888-7777418999999999888899999886620257889999997124886573677657


Q ss_pred             CCHHHHCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             10020000329897603478962223557815799999999711677888898547886299878999987654476789
Q 002649          585 PHFRYTMEINALARKVLINADGIFETNFFPGKYCMEFSSVIYDKHWRFDNEGLPKDLIRRGIAVEDPKAPHGLKLNIEDY  664 (896)
Q Consensus       585 PHfr~Tl~IN~lAR~~LI~~gGiie~~f~~G~~~~elss~~Y~~~w~F~~~~lP~DL~~RG~a~~D~~~~hgl~l~l~dY  664 (896)
                      ||||+||+||++||+.|||++|++|++|++|+++|||++++|+. |+|++++||+||++|||+++|+++|||++|+||||
T Consensus       556 PHfr~Tl~IN~~AR~~LI~~gGiie~~~~~G~~~~elss~ayk~-w~f~~~~LP~DL~~RGva~~D~~~p~gl~l~ipdY  634 (864)
T 2iuk_A          556 PHYRDTININGLARQSLINADGIIEKSFLPGKYSIEMSSSVYKN-WVFTHQALPADLVKRGLAIEDPSAPHGLRLVIEDY  634 (864)
T ss_dssp             GGGTTHHHHHHHHHHHTSSTTSHHHHHSTTGGGHHHHHHHHHTT-CCGGGSSHHHHHHHTTSEEECSSSTTSEEESSSCC
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHCC-CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf             88887888789999734088871122126761079999999735-77740338488885698777766665411247788


Q ss_pred             CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf             76211289999999999875430246554656868899999999820567778999999989956799988452001333
Q 002649          665 PYANDGLDLWDALKQWVTNYVNHYYPDPSLVESDEELQAWWTEIRTVGHAEKKDEPWWPVLKTPQDLIEIITTIAWVASG  744 (896)
Q Consensus       665 pYadDGL~IW~AI~~~V~~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~Gh~d~kd~p~~P~l~T~~~Lv~~lT~iIf~aSa  744 (896)
                      |||+|||+||+||++||++||++||++|++|++|.|||+||+||+++||+|+++++|||+|+|+++||++||+|||+||+
T Consensus       635 pYadDGL~iW~AIk~~V~~yV~~YY~sD~~V~~D~ELQaW~~Ei~~~Gh~d~kd~~~~P~l~T~~eLi~~lT~IIf~aSa  714 (864)
T 2iuk_A          635 PYAVDGLEIWDAIKTWVHEYVSLYYPTDAAVQQDTELQAWWKEAVEKGHGDLKEKPWWPKKQTTEDLIQSCSIIVWTASA  714 (864)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHCHHHHHHHHHHHHTTTGGGTTCTTCCCSSSHHHHHHHHHHHHHHHTH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHEEEECCCC
T ss_conf             75402799999999999999998758812203789999999999725788777788887767799999986523230441


Q ss_pred             CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             21111345520021269962213889999998916888631032999982199968999999999973178999754467
Q 002649          745 HHAAVNFGQYLYGGYFPNRPTVARTNLPNEDQTKEEWKSFLEKPEAALLRCFPAQFQALTVMLVIDLLSTHSPDEEYLGK  824 (896)
Q Consensus       745 ~HAAVNfgQy~y~gf~PN~P~~~r~p~P~~kkg~~e~~~~~~~pe~~~L~~lP~~~qa~~~m~~~~~LS~hs~de~yLG~  824 (896)
                      ||||||||||+|+||+||+|++||+|||++  |..++++|+.+||+++|++||++.||+.+|+++++||+|++||+|||+
T Consensus       715 qHAAVNFgQydy~gfvPN~P~~~r~p~P~~--G~~~~~~l~~~pe~~~L~tLP~~~qa~~~m~l~~lLS~h~~de~yLG~  792 (864)
T 2iuk_A          715 LHAAVNFGQYPYGGLILNRPTLARRFIPAE--GTPEYDEMVKNPQKAYLRTITPKFETLIDLSVIEILSRHASDEIYLGE  792 (864)
T ss_dssp             HHHHHHTTHHHHHTSTTTSCCCCCSCCCCT--TSHHHHHHHHCHHHHHHTTSCCHHHHHHHHHHHHHHTCCCSSCCBTTC
T ss_pred             HHHHHCCCCCHHHCCCCCCCHHHCCCCCCC--CCHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf             245440263212144678975556789999--854476653170999988688999999999999998427888531466


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             789999993789999999999999999999762288210025788657720004799999976887753249
Q 002649          825 EMEPAWGDDPVIKAAFEEFNLKMQELERIIDDRNSNENLKNRTGAAIVPYELLKPFSEPGATGKGVPYSISI  896 (896)
Q Consensus       825 ~~~~~~~~d~~~~~a~~~F~~~L~~Ie~~I~~RN~~~~lknR~g~~~~PY~~L~Pss~~g~t~~gIPnSIsI  896 (896)
                      |+++.|++|+++++|+++|+++|++||+.|++||++++||||+||+++||+||+|+|+||||||||||||||
T Consensus       793 ~~~~~~~~d~~~~~a~~~F~~~L~~Ie~~I~~RN~~~~lknR~g~~~lPY~yL~P~s~~g~t~~~IPNSIsI  864 (864)
T 2iuk_A          793 RETPNWTTDKKALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLLHRSSEEGLTFKGIPNSISI  864 (864)
T ss_dssp             CSCTTSCSCHHHHHHHHHHHHHHHHHHHHHHHHSSCTTCGGGTGGGTCCCCTTCSCCCSSSCSCCCBSSCCC
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
T ss_conf             676222358789999999999999999999998668123204788787710048888788665787873569


No 2  
>2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max}
Probab=1.00  E-value=1  Score=2088.83  Aligned_cols=824  Identities=45%  Similarity=0.812  Sum_probs=780.9

Q ss_pred             CCEEEEEEEEECCEEEEEEEEEECCCC--------CCCHHHHHCCC-CEEEEEEECCCCCCCCCCC----CCCCCCCCCC
Q ss_conf             731169987411125765368525455--------78123330025-3799998510179988844----3103454457
Q 002649           55 NSIKAIFNLTAEKSTKVKAVITVKPIV--------SDPLAVEKLIG-TLVLELVSAELDPETGKEK----PTIKSRAHRS  121 (896)
Q Consensus        55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~d~~~~~~g-~v~l~lvS~~~~~~~~~~~----~~~~~~~~~~  121 (896)
                      .++||+|++|++++++++++.+++..+        ..+|+++ ++| +|+|||||++++ +||+||    ++|++|+++ 
T Consensus         9 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~g~~v~lqlvs~~~~-~~~~~~~~~~~~~~~~~~~-   85 (853)
T 2iuj_A            9 QKIKGTMVVMQKNVLDINSITSVDGIVGTGLDFLGSALDTVT-FLASSISIQLISATKA-DGGKGKVGKATNLRGKITL-   85 (853)
T ss_dssp             CEEEEEEEEEEGGGSSSSCCCCC--------------CCCCC-CCSSSEEEEEEEEEEE-SSSSEEEEEEEECCCCCCC-
T ss_pred             CEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE-ECCCEEEEEEEEEEEC-CCCCCCCCCCCCCCCCCCC-
T ss_conf             678999999862534656632233322333333443000002-4277279999996547-9999666876600144578-


Q ss_pred             CCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCCEEEEEEEEECCCC-CCEEEECCCCCCCCCCCCCCEEEEECCCCC
Q ss_conf             8779997226999983579989616999996799972572899800489-838973177645897797642883073015
Q 002649          122 LFTDDDGNLKYKTEFDVPSNFGEVGAILVEADQLTETFLKDIALDGLRN-GPVNIACDSWIQPKIVDKQKRIFFTNKSYL  200 (896)
Q Consensus       122 ~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~~~~e~fl~~i~l~~~p~-g~~~F~c~sWv~~~~~~~~~riff~n~~yL  200 (896)
                      ....+++ ++|+|+|.|+++||+||||+|+|+|++||||++|+|+++|+ |.++|||||||++.++|+.+||||+|++||
T Consensus        86 ~~~~~~~-~~~~v~f~~~~~~G~~gav~v~n~~~~e~fl~~i~l~~~p~~g~~~F~c~sWv~~~~~~~~~riff~n~~yl  164 (853)
T 2iuj_A           86 PTIGAKE-EAYDAQFDWDSDFGIPGAFYIKNYMQNEFYLKSLILEDIPNHGTIHFICNSWVYNSKHYKTDRIFFANNTYL  164 (853)
T ss_dssp             SSCCTTE-EEEEEEEECCSSSCCEEEEEEEECSSSCEEEEEEEECCCTTSCCEEEEEEEEECBTTSCSSCEEEECSCCCC
T ss_pred             CCCCCCC-EEEEEEEECCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCC
T ss_conf             8787784-589997424445797259999826885005768999205899738987055335787898875997278667


Q ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             68997576899999999640899876434571541434457999986678787555678998999986678999999999
Q 002649          201 PSQTPNGLARLRAEELNNLQGDGQGERKIHERIYDYDVYNDLGMPDSILKSDLVRPVLGGKEHPYPRRCRTGHPKSSKDP  280 (896)
Q Consensus       201 p~~tp~~l~~~R~~EL~~lrg~g~g~r~~~driYdy~~yndlG~Pd~~~~~~~~rpvlgg~~~pyPrr~rtgr~~~~~d~  280 (896)
                      |++||++|+++|++||++|||||+||||+||||||||+|||||+||+  +++++||||||+++||||||||||+++++||
T Consensus       165 p~~tp~~l~~~R~~EL~~lrg~g~g~rk~~driYdy~~yndlg~pd~--~~~~~rpvlgGs~~Pyprr~rtgr~~~~~d~  242 (853)
T 2iuj_A          165 PSETPAPLVKYREEELKNVRGDGTGERKEWDRIYDYDVYNDLGDPDK--GEKYARPVLGGSALPYPRRGRTGRGKTRKDP  242 (853)
T ss_dssp             GGGSCTTTHHHHHHHHHHHHCCSCSCCCTTCCCCCEECBCCSCCGGG--CTTSCCCCBSSSSSCCCCEECCCCCBCSSCT
T ss_pred             CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             56688889999999999952789765454560565111035888766--7543575458987988765557999766786


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHCCHHHCHHHHHHHHHHHHHHHHH--HCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             987755878559887777000011000016887743456688886--048899999988999872169889975446631
Q 002649          281 ASESWSLSVYVPRDEAFSLLKTAQFSATGVYSALHAVIPFVESIL--RIGKDKGFPSLEAIDKLFNEGVELPPEIEKLPS  358 (896)
Q Consensus       281 ~~e~~~~~~yvPrDE~F~~~K~~~F~~~~~k~~~~~~~p~l~~~~--~~~~~~~f~~f~di~~ly~~~~~~~~~~~~~~~  358 (896)
                      .+|+|...+||||||+|+++|.++|.++++++++|.++|.+++++  + .+..+|++|+||++||++|+++| ..    .
T Consensus       243 ~~e~~~~~~yvPrDe~f~~~K~~~f~~~~~~~~~~~~~p~l~~~~~~~-~~~~~f~~f~di~~ly~~g~~l~-~~----~  316 (853)
T 2iuj_A          243 NSEKPGDFVYLPRDEAFGHLKSSDFLAYGIKSVAQDVLPVLTDAFDGN-LLSLDFDNFAEVRKLYEGGVTLP-TN----F  316 (853)
T ss_dssp             TSBCCCSSCCCCGGGSCCCSSGGGCHHHHHHHHHTTHHHHHHHHHHTT-SSCSSCCSHHHHHHHHHHCCCCC-HH----H
T ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCHHHHHHHHHCCCCCC-HH----H
T ss_conf             544666678889765546212777878789999987699998885056-77677899999999875456670-44----4


Q ss_pred             CCCC--CHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             0010--01223221246764223357100111422552508999777408995210024579989999988879987623
Q 002649          359 WLKI--LPNFFKSIANTGKDILRFETPETLKRDKLFWLRDEEFGRETLAGLNPYGISLVADWPLKSTLDPETYGPTESAI  436 (896)
Q Consensus       359 ~~~~--~~~~~~~~~~~~~~~l~fp~P~~~~~~~~~W~~DeeFarQ~LaG~NP~~Irr~~e~P~~s~Ldp~~yg~~~s~I  436 (896)
                      ++++  ++.+.+.+.++++++||||+|+++++|+++|++|+|||||+|||+||++|+||++||++|+|||++||+++|+|
T Consensus       317 ~~~~~p~~~~~~~~~~~~~~~lkfp~P~vi~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~~~ldp~~yg~~~s~i  396 (853)
T 2iuj_A          317 LSNITPIPIIKELFRTDGEQFLKYPPPKVMQVDKSAWMTDEEFARETIAGLNPNVIKIIEEFPLSSKLDTQAYGDHTCII  396 (853)
T ss_dssp             HHHSCCCTTSSTTTTCCSSSCCCCCCCGGGTSCTTTTTSHHHHHHTTTSSSSTTCCEECCSSSCCCCSCTTTTCCCCCCC
T ss_pred             HCCCCCHHHHHHHHHCCCCCCCCCCCCCEEECCHHHHHCHHHHHHHHHCCCCCHHEEECCCCCCCCCCCHHHCCCCCCCC
T ss_conf             30348399999875224310013899743414612111629999998628896111242006863447754418755646


Q ss_pred             CHHHHHHHHCCCCCHHHHHHCCCEEEEECCCCCCCCHHCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCC--
Q ss_conf             299999750897639999856958896055213610000137888511012027964899943458999407999999--
Q 002649          437 TKELIEKEIGGSMTVEEAIKQKKLFIIDYHDALLPYVEKVRQIKDTTLYGSRTVFFLNPDGTLRPLAIELTRPPMDGK--  514 (896)
Q Consensus       437 t~e~i~~~l~g~~tl~~al~~grLFi~Dy~d~~lp~l~~in~~~g~~~YA~~~Lffl~~dG~L~PIAIqL~~p~~~~~--  514 (896)
                      |++||+..++| +||++|+++|||||+||||++|||++++|. ++++.|||+||||++++|+|+||||||++++++++  
T Consensus       397 t~e~i~~~l~g-~tl~~al~~grLFi~Dy~d~~lp~~~~in~-~~~~~yAp~~Lffl~~dG~L~PlAIqL~~~~~~~~~~  474 (853)
T 2iuj_A          397 TKEHLEPNLGG-LTVEQAIQNKKLFILDHHDYLIPYLRKINA-NTTKTYATRTIFFLKNDGTLTPLAIELSKPHPQGEEY  474 (853)
T ss_dssp             CTTTTSCSSCC-SCHHHHHHTTCEEECCCSTTTGGGHHHHHT-SSCCCCBCCEEEEECTTSCEEEEEEEEEECCTTCGGG
T ss_pred             CHHHHHHCCCC-CCHHHHHHCCCEEEECCHHHHCCHHHCCCC-CCCEEECCEEEEEECCCCCEEEEEEEEECCCCCCCCC
T ss_conf             79998610378-769999765998995144652620102588-8867644567999879996757999964699877656


Q ss_pred             CCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHCCCCHHHHCCCH
Q ss_conf             99852451899999982278999999983322356888865210221146899770446876832230231002000032
Q 002649          515 PQWKQVFTPSTGNSTESWLWRLAKAHVLAHDSGYHQLISHWLRTHCCVEPYVIATNRRLSAMHPINRLLKPHFRYTMEIN  594 (896)
Q Consensus       515 ~~~~~VfTP~d~~~~~~~~W~LAK~~v~~aD~~~HqlvsHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN  594 (896)
                      ++.++||||+| +++++|.|+|||+||++||+++||+++||++||+++|||+|||+||||.+|||||||.||||+||+||
T Consensus       475 ~~~~~VftP~d-d~~~~~~W~lAK~~v~~aD~~~HqlisHll~THlv~Epf~IAt~RqLs~~HPI~kLL~PH~r~Tl~IN  553 (853)
T 2iuj_A          475 GPVSEVYVPSS-EGVEAYIWLLAKAYVVVNDACYHQIISHWLNTHAVVEPFVIATNRHLSVVHPIYKLLFPHYRDTMNIN  553 (853)
T ss_dssp             CCEEEEECCCC-SSHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHHHHHHHHHSCTTCHHHHHHGGGGTTHHHHH
T ss_pred             CCCCCEECCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             67787589888-77775089999999998888899998755102577899999972248866841655368888688888


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             98976034789622235578157999999997116778888985478862998789999876544767897621128999
Q 002649          595 ALARKVLINADGIFETNFFPGKYCMEFSSVIYDKHWRFDNEGLPKDLIRRGIAVEDPKAPHGLKLNIEDYPYANDGLDLW  674 (896)
Q Consensus       595 ~lAR~~LI~~gGiie~~f~~G~~~~elss~~Y~~~w~F~~~~lP~DL~~RG~a~~D~~~~hgl~l~l~dYpYadDGL~IW  674 (896)
                      ++||+.|||++|++|++|++|+++|||++++|+. |+|++++||+||++|||+++|+++|||+||+|||||||+|||+||
T Consensus       554 ~~AR~~LI~~gGiie~~~~~G~~~~el~s~~yk~-w~f~~~~LP~DL~~RGv~~~D~~~p~gl~l~i~dYpYadDgL~iW  632 (853)
T 2iuj_A          554 SLARKSLVNADGIIEKTFLWGRYSLEMSAVIYKD-WVFTDQALPNDLVKRGVAVKDPSAPHGVRLLIEDYPYASDGLEIW  632 (853)
T ss_dssp             HHHHHHTSSTTCHHHHHSTTGGGHHHHHHHHHTT-CCSGGGSHHHHHHHHTSEEECTTSTTSEEESSTTCHHHHHHHHHH
T ss_pred             HHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHCC-CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf             9999743188875002025760069999999715-777424485888856987777777653001366787641279999


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             99999998754302465546568688999999998205677789999999899567999884520013332111134552
Q 002649          675 DALKQWVTNYVNHYYPDPSLVESDEELQAWWTEIRTVGHAEKKDEPWWPVLKTPQDLIEIITTIAWVASGHHAAVNFGQY  754 (896)
Q Consensus       675 ~AI~~~V~~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~Gh~d~kd~p~~P~l~T~~~Lv~~lT~iIf~aSa~HAAVNfgQy  754 (896)
                      +||++||++||++||++|++|++|.|||+||+||+++||+|+++++|||+|+|+++||++||+|||+||+||||||||||
T Consensus       633 ~AI~~~V~~yv~~YY~sD~~V~~D~ELQaW~~Ei~~~Gh~d~kd~~~~P~l~T~~eLi~~lT~iIf~aSaqHAAVNfgQy  712 (853)
T 2iuj_A          633 DAIKSWVEEYVSFYYKSDEELQKDPELQAWWKELVEVGHGDLKDKPWWQKMQTREELVEASATLIWIASALHAAVNFGQY  712 (853)
T ss_dssp             HHHHHHHHHHHHHHCSCHHHHTTCHHHHHHHHHHHHTTTGGGTTCTTSCCSCSHHHHHHHHHHHHHHHHHHHHHHHTTSH
T ss_pred             HHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHEEEECCCCHHHHHCCCCC
T ss_conf             99999999999986488110158889999999998157777666788877667999998864553424421454403744


Q ss_pred             EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC-CCCCC
Q ss_conf             00212699622138899999989168886310329999821999689999999999731789997544677899-99993
Q 002649          755 LYGGYFPNRPTVARTNLPNEDQTKEEWKSFLEKPEAALLRCFPAQFQALTVMLVIDLLSTHSPDEEYLGKEMEP-AWGDD  833 (896)
Q Consensus       755 ~y~gf~PN~P~~~r~p~P~~kkg~~e~~~~~~~pe~~~L~~lP~~~qa~~~m~~~~~LS~hs~de~yLG~~~~~-~~~~d  833 (896)
                      +|+||+||+|++||+|||++  |..+|++|+.+||+++|++||++.||+.+|+++++||+|++||+|||+|+++ .|++|
T Consensus       713 dy~gfvPN~P~~~r~p~P~~--g~~~~~~l~~~~e~~~L~tLP~~~qa~~~m~l~~lLS~~~~de~yLG~~~~~~~~~~d  790 (853)
T 2iuj_A          713 PYGGLILNRPTISRRFMPEK--GSPEYDALAKNPEKEFLKTITGKKETLIDLTIIEILSRHASDEFYLGQRDGGDYWTSD  790 (853)
T ss_dssp             HHHSSTTTSCCCBCSCCCCS--SCHHHHHHHHCHHHHHHTTBCCHHHHHHHHHHHHHTTCBCTTCCBTTTCSSCTTSCSC
T ss_pred             CHHCCCCCCCHHHCCCCCCC--CCHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             00044678875546799999--8433665531709999886887999999999999973799886515655763112368


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             789999999999999999999762288210025788657720004799999976887753249
Q 002649          834 PVIKAAFEEFNLKMQELERIIDDRNSNENLKNRTGAAIVPYELLKPFSEPGATGKGVPYSISI  896 (896)
Q Consensus       834 ~~~~~a~~~F~~~L~~Ie~~I~~RN~~~~lknR~g~~~~PY~~L~Pss~~g~t~~gIPnSIsI  896 (896)
                      +++++|+++|+++|++||+.|++||++++||||+||+++||+||+|+++||||||||||||||
T Consensus       791 ~~~~~a~~~F~~~L~~Ie~~I~~RN~~~~lknr~g~~~~PY~~L~P~s~~g~t~~~IPNSIsI  853 (853)
T 2iuj_A          791 AGPLEAFKRFGKNLEEIEKKLIEKNNDETLRNRYGPAKMPYTLLYPSSEEGLTFRGIPNSISI  853 (853)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTCSSCGGGTTTTTCCCCTTCSCCCSBSCSCCCBSSCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
T ss_conf             789999999999999999999998568033224788888813568888788665787873569


No 3  
>1f8n_A Lipoxygenase-1; dioxygenase, metalloprotein, fatty acids, oxidoreductase; 1.40A {Glycine max} SCOP: a.119.1.1 b.12.1.1 PDB: 1yge_A 2sbl_B 3pzw_A 1fgq_A 1fgr_A 3bnd_A 1fgt_A 1fgm_A 3bnb_A 1fgo_A 1y4k_A 3bne_A 3bnc_A 1ik3_A* 1hu9_A* 1jnq_A* 1lnh_A 1n8q_A* 1no3_A* 1rrh_A ...
Probab=1.00  E-value=1  Score=2084.65  Aligned_cols=821  Identities=43%  Similarity=0.773  Sum_probs=781.0

Q ss_pred             CCEEEEEEEEECCEEEEEEEEEECCCCCCCHHHHHCCC-CEEEEEEECCCCCCCCCCC----CCCCCCCCCCCCCCCCCC
Q ss_conf             73116998741112576536852545578123330025-3799998510179988844----310345445787799972
Q 002649           55 NSIKAIFNLTAEKSTKVKAVITVKPIVSDPLAVEKLIG-TLVLELVSAELDPETGKEK----PTIKSRAHRSLFTDDDGN  129 (896)
Q Consensus        55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g-~v~l~lvS~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~  129 (896)
                      .++||+|++|++++++++ ..+   ++  +|+++|++| +|+|||||+++||+||+||    ++|++|+.+.....+++ 
T Consensus         6 ~~~~~~v~~~~~~~l~~~-~~~---~~--~d~~~~~~g~~~~l~lvs~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~-   78 (839)
T 1f8n_A            6 HKIKGTVVLMPKNELEVN-PDG---SA--VDNLNAFLGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGE-   78 (839)
T ss_dssp             CEEEEEEEEEECC------------------CGGGGTTTTEEEEEEEEEEECTTSSEEECCCEECCEEECCCSCCCTTC-
T ss_pred             CEEEEEEEEEECCCCCCC-CCC---CC--HHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-
T ss_conf             578999999962435646-666---30--24466651681799999753489899876787550024356898677771-


Q ss_pred             EEEEEEEECCCCCCCEEEEEEEECCCCCEEEEEEEEECCCC-CCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCHHH
Q ss_conf             26999983579989616999996799972572899800489-83897317764589779764288307301568997576
Q 002649          130 LKYKTEFDVPSNFGEVGAILVEADQLTETFLKDIALDGLRN-GPVNIACDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGL  208 (896)
Q Consensus       130 ~~y~v~f~~~~~fG~pgai~v~n~~~~e~fl~~i~l~~~p~-g~~~F~c~sWv~~~~~~~~~riff~n~~yLp~~tp~~l  208 (896)
                      ++|+++|.||++||+||||+|+|+|++||||++|+|+++|+ |.+||+||||||+.++|+.+||||+|++|||++||++|
T Consensus        79 ~~~~~~f~~~~~fg~pga~~v~n~~~~e~~l~~~~l~~~~~~~~~~f~cnswv~~~~~~~~~riff~n~~ylp~~tp~~l  158 (839)
T 1f8n_A           79 SAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETPAPL  158 (839)
T ss_dssp             EEEEEEEECCGGGCCEEEEEEEECSSSCEEEEEEEECC----CCEEEEEEEEECBGGGCSSCEEEECSCCCCGGGSCGGG
T ss_pred             EEEEEEEEECCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCHHH
T ss_conf             69999998414669850699883798714898999804788875898616641778789887275258620677896677


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             8999999996408998764345715414344579999866787875556789-989999866789999999999877558
Q 002649          209 ARLRAEELNNLQGDGQGERKIHERIYDYDVYNDLGMPDSILKSDLVRPVLGG-KEHPYPRRCRTGHPKSSKDPASESWSL  287 (896)
Q Consensus       209 ~~~R~~EL~~lrg~g~g~r~~~driYdy~~yndlG~Pd~~~~~~~~rpvlgg-~~~pyPrr~rtgr~~~~~d~~~e~~~~  287 (896)
                      +++|++||++|||||+||||+||||||||+|||||+||+  +++++|||||| ++|||||||||||+++++||.+|+|..
T Consensus       159 ~~~r~~el~~lrG~g~G~rk~~driYdyd~ynDlg~pd~--~~~~~rpvlggs~~~Pyprr~rtgr~~~~~d~~~e~~~~  236 (839)
T 1f8n_A          159 VSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDK--SEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGE  236 (839)
T ss_dssp             HHHHHHHHHHHHCCSCSCCCTTCCCCCEECBCSSCCTTT--CGGGCCCCBSSSSSSCCCCEECCCCCBCSSCTTSBCCCS
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             766699999840688651133120100434314568776--744356535899888888745569998788998667765


Q ss_pred             CCCCCCCCCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHC-CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC--CH
Q ss_conf             7855988777700001100001688774345668888604-88999999889998721698899754466310010--01
Q 002649          288 SVYVPRDEAFSLLKTAQFSATGVYSALHAVIPFVESILRI-GKDKGFPSLEAIDKLFNEGVELPPEIEKLPSWLKI--LP  364 (896)
Q Consensus       288 ~~yvPrDE~F~~~K~~~F~~~~~k~~~~~~~p~l~~~~~~-~~~~~f~~f~di~~ly~~~~~~~~~~~~~~~~~~~--~~  364 (896)
                      .+||||||+|++.|.++|.+++++++++.++|.++++++. ++..+|++|+||++||++|+++| ..    .++..  ++
T Consensus       237 ~~yvPrDe~f~~~K~~~f~~~~~~~~~~~~~p~l~~~~~~~~~~~~f~~f~di~~ly~~g~~l~-~~----~~~~~~p~~  311 (839)
T 1f8n_A          237 VFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP-RD----VISTIIPLP  311 (839)
T ss_dssp             SCCCCGGGSCCCSSGGGCGGGHHHHHHHTHHHHHHHHHHTTCSCSSCCSHHHHHGGGTTCEECC-HH----HHHHHTTST
T ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCC-HH----HHHCCCCHH
T ss_conf             7788986455732066688889999998768888877415566666678999997764367670-45----540237288


Q ss_pred             HHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             22322124676422335710011142255250899977740899521002457998999998887998762329999975
Q 002649          365 NFFKSIANTGKDILRFETPETLKRDKLFWLRDEEFGRETLAGLNPYGISLVADWPLKSTLDPETYGPTESAITKELIEKE  444 (896)
Q Consensus       365 ~~~~~~~~~~~~~l~fp~P~~~~~~~~~W~~DeeFarQ~LaG~NP~~Irr~~e~P~~s~Ldp~~yg~~~s~It~e~i~~~  444 (896)
                      .+.+.+.++++.+++||+|+++++|+++|++|+|||||+|||+||++|+||++||++|+|||++||+++|+||++|++  
T Consensus       312 ~~~~i~~~~~~~~l~~p~P~vi~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~~~ldp~~yg~~~s~it~e~i~--  389 (839)
T 1f8n_A          312 VIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--  389 (839)
T ss_dssp             TGGGSCEECSSSEEECCCCGGGSSCSSGGGSHHHHHHHHHHSSSCSCCEECCSSSCCCCSCHHHHCCCCCCCCGGGCC--
T ss_pred             HHHHHHHCCCCCCCCCCCCCHHHCCCHHHHCHHHHHHHHHHCCCCHHHEECCCCCCCCCCCHHHCCCCCCCCCHHHHH--
T ss_conf             999987415421003898511004512111679999998708996430053117973447765508855634288863--


Q ss_pred             HCCCCCHHHHHHCCCEEEEECCCCCCCCHHCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCC--CCCEEEE
Q ss_conf             08976399998569588960552136100001378885110120279648999434589994079999999--9852451
Q 002649          445 IGGSMTVEEAIKQKKLFIIDYHDALLPYVEKVRQIKDTTLYGSRTVFFLNPDGTLRPLAIELTRPPMDGKP--QWKQVFT  522 (896)
Q Consensus       445 l~g~~tl~~al~~grLFi~Dy~d~~lp~l~~in~~~g~~~YA~~~Lffl~~dG~L~PIAIqL~~p~~~~~~--~~~~VfT  522 (896)
                      ++| +||++|+++|||||+||||++|||+.++|.++++++|||+||||++++|+|+||||||+++++++++  +.++|||
T Consensus       390 l~g-~tl~~al~~grLFi~Dy~d~~lp~l~~in~~~~~~~YAp~tLffl~~dg~L~PlAIqL~~~~~~~~~~~~~~~vft  468 (839)
T 1f8n_A          390 LDG-YTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVL  468 (839)
T ss_dssp             CTT-CCHHHHHHTTCEEEEECHHHHHHHHHHHHTSTTCCCCEEEEEEEECTTSCEEEEEEEEECCCCTTCSCCCCCEEEC
T ss_pred             CCC-CCHHHHHHCCCEEEECCHHHHCCCHHHCCCCCCCEEECCEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCEEC
T ss_conf             167-5399998659989941515425302321557895313355789987899776799996479987765677788589


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHCCCCHHHHCCCHHHHHHCCC
Q ss_conf             89999998227899999998332235688886521022114689977044687683223023100200003298976034
Q 002649          523 PSTGNSTESWLWRLAKAHVLAHDSGYHQLISHWLRTHCCVEPYVIATNRRLSAMHPINRLLKPHFRYTMEINALARKVLI  602 (896)
Q Consensus       523 P~d~~~~~~~~W~LAK~~v~~aD~~~HqlvsHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI  602 (896)
                      |+| +++++|.|+|||+||++||+++||+++||++||+++|||+|||+||||.+|||||||.||||+||+||++||+.||
T Consensus       469 P~d-d~~~~~~W~LAK~~v~~aD~~~HqlisHll~THlv~Epf~IAt~RqLs~~HPI~kLL~PH~r~Tl~IN~~AR~~LI  547 (839)
T 1f8n_A          469 PAK-EGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLI  547 (839)
T ss_dssp             CCS-SHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHHHHHHHHHSCTTCHHHHHHGGGGTTHHHHHHHHHHHTS
T ss_pred             CCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             887-7777608999999999888899999886630357789999997113886584677777999999888899997331


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             78962223557815799999999711677888898547886299878999987654476789762112899999999998
Q 002649          603 NADGIFETNFFPGKYCMEFSSVIYDKHWRFDNEGLPKDLIRRGIAVEDPKAPHGLKLNIEDYPYANDGLDLWDALKQWVT  682 (896)
Q Consensus       603 ~~gGiie~~f~~G~~~~elss~~Y~~~w~F~~~~lP~DL~~RG~a~~D~~~~hgl~l~l~dYpYadDGL~IW~AI~~~V~  682 (896)
                      |++|++|++|++|+++|||++++|++ |+|++++||+||++|||+++|+++|||++|+|||||||+|||+||+||++||+
T Consensus       548 ~~gGiie~~fs~g~~~~el~s~~yk~-w~f~~~~lP~DL~~RG~~~~D~~~p~gl~l~ipdYpYadDgL~iW~AIk~~V~  626 (839)
T 1f8n_A          548 NANGIIETTFLPSKYSVEMSSAVYKN-WVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQ  626 (839)
T ss_dssp             STTSHHHHHSTTGGGHHHHHHHHHTT-CCGGGGSHHHHHHHTTSEEECTTSTTSEEESSTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEECCCCHHHHHHHHHHHCC-CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf             88871223205761069999999725-77731338488886698777777765400026788642007999999999999


Q ss_pred             HHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCC
Q ss_conf             75430246554656868899999999820567778999999989956799988452001333211113455200212699
Q 002649          683 NYVNHYYPDPSLVESDEELQAWWTEIRTVGHAEKKDEPWWPVLKTPQDLIEIITTIAWVASGHHAAVNFGQYLYGGYFPN  762 (896)
Q Consensus       683 ~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~Gh~d~kd~p~~P~l~T~~~Lv~~lT~iIf~aSa~HAAVNfgQy~y~gf~PN  762 (896)
                      +||++||++|++|++|.|||+||+||+++||+|+++++|||+|+|+++||++||+|||+||+||||||||||+|+||+||
T Consensus       627 ~yv~~YY~sD~~V~~D~ELQaW~~Ei~~~Gh~d~kd~~~~p~l~T~~~Li~~lT~iIf~aSaqHAAVNfgQydy~gfvPN  706 (839)
T 1f8n_A          627 EYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMN  706 (839)
T ss_dssp             HHGGGTCCSHHHHHTCHHHHHHHHHHHHTTTGGGTTCTTCCCCCSHHHHHHHHHHHHHHHTHHHHHHHTTHHHHHTSTTT
T ss_pred             HHHHHHCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEECCCCHHHHHCCCCCCCCCCCCC
T ss_conf             99998749803313789999999999705787777788887766799999986522121441145440374510042678


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             62213889999998916888631032999982199968999999999973178999754467789999993789999999
Q 002649          763 RPTVARTNLPNEDQTKEEWKSFLEKPEAALLRCFPAQFQALTVMLVIDLLSTHSPDEEYLGKEMEPAWGDDPVIKAAFEE  842 (896)
Q Consensus       763 ~P~~~r~p~P~~kkg~~e~~~~~~~pe~~~L~~lP~~~qa~~~m~~~~~LS~hs~de~yLG~~~~~~~~~d~~~~~a~~~  842 (896)
                      +|++||+|||++  |..++++++.+||+++|++||++.||+.+|+++++||+|++||+|||+|+++.|++|+++++|+++
T Consensus       707 ~P~~~r~p~P~~--g~~~~~~l~~~~e~~~L~tLP~~~qa~~~m~l~~lLS~~~~de~yLG~~~~~~~~~d~~~~~a~~r  784 (839)
T 1f8n_A          707 RPTASRRLLPEK--GTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQK  784 (839)
T ss_dssp             SCSCBCSCCCCT--TSHHHHHHHHCHHHHHHHHBCCHHHHHHHHHHHHHHTCBCTTCCBTTCCSCTTSCSCHHHHHHHHH
T ss_pred             CCHHHCCCCCCC--CCHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf             876656789999--854476654366999988788899999999999998527987533566575233358789999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCC-CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             9999999999997622882100-25788657720004799999976887753249
Q 002649          843 FNLKMQELERIIDDRNSNENLK-NRTGAAIVPYELLKPFSEPGATGKGVPYSISI  896 (896)
Q Consensus       843 F~~~L~~Ie~~I~~RN~~~~lk-nR~g~~~~PY~~L~Pss~~g~t~~gIPnSIsI  896 (896)
                      |+++|++||+.|++||++++|| ||+|||++||+||+|+++||||||||||||||
T Consensus       785 F~~~L~~Ie~~I~~RN~d~~lk~nr~g~~~~PY~~L~P~s~~g~t~~~IPNSIsI  839 (839)
T 1f8n_A          785 FGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI  839 (839)
T ss_dssp             HHHHHHHHHHHHHHHHHCGGGHHHHTTTTTCCCCTTCSCCCSBSCSCCCBSSCCC
T ss_pred             HHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
T ss_conf             9999999999999986572022125788777710158888788665787883579


No 4  
>1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A*
Probab=1.00  E-value=1  Score=1406.62  Aligned_cols=632  Identities=24%  Similarity=0.386  Sum_probs=566.0

Q ss_pred             CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCC---CCEEEEEEEEECCC
Q ss_conf             379999851017998884431034544578779997226999983579989616999996799---97257289980048
Q 002649           93 TLVLELVSAELDPETGKEKPTIKSRAHRSLFTDDDGNLKYKTEFDVPSNFGEVGAILVEADQL---TETFLKDIALDGLR  169 (896)
Q Consensus        93 ~v~l~lvS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~~~---~e~fl~~i~l~~~p  169 (896)
                      +|.++|+.+.-+    .++..|+       ..+.|...+|.+  .++.++|+|++|+|+|++.   ++|||++|+|++ |
T Consensus        20 ~V~i~L~G~~G~----s~~~~L~-------~FerG~~d~F~v--~~~~dlG~l~~I~I~~d~~g~~~~Wfl~~V~V~~-p   85 (662)
T 1lox_A           20 KVELWLVGQHGE----VELGSCL-------RPTRNKEEEFKV--NVSKYLGSLLFVRLRKKHFLKEDAWFCNWISVQA-L   85 (662)
T ss_dssp             EEEEEEEESSCE----EEEEEEE-------CCCTTCEEEEEE--ECSSCCCSEEEEEEEEECSSSCCCEEEEEEEEEE-S
T ss_pred             CEEEEEEECCCC----CCCEECC-------CCCCCCCCEEEE--EECCCCCCCEEEEEEECCCCCCCCCEEEEEEEEC-C
T ss_conf             179999979997----0585677-------737999218999--8237788652899995899999872884899943-8


Q ss_pred             C--C-CEEEECCCCCCCCCCCCCCEEEEEC-CCCCCCC-CCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCC
Q ss_conf             9--8-3897317764589779764288307-3015689-97576899999999640899876434571541434457999
Q 002649          170 N--G-PVNIACDSWIQPKIVDKQKRIFFTN-KSYLPSQ-TPNGLARLRAEELNNLQGDGQGERKIHERIYDYDVYNDLGM  244 (896)
Q Consensus       170 ~--g-~~~F~c~sWv~~~~~~~~~riff~n-~~yLp~~-tp~~l~~~R~~EL~~lrg~g~g~r~~~driYdy~~yndlG~  244 (896)
                      +  | .++|||||||++     .+||||+| ++|||++ ||++|+++|++||+++|           |+|||++||| |.
T Consensus        86 ~~~g~~~~F~Cn~WL~~-----~~rvff~~G~~~Lp~~D~~~~l~~~R~~eL~~~~-----------~~Y~~~~y~d-G~  148 (662)
T 1lox_A           86 GAAEDKYWFPCYRWVVG-----DGVQSLPVGTGCTTVGDPQGLFQKHREQELEERR-----------KLYQWGSWKE-GL  148 (662)
T ss_dssp             SSCCCCEEEEEEEEECS-----SCCEEEECTTCCCSTTCTTCTTHHHHHHHHHHHH-----------HHSCEECSST-TS
T ss_pred             CCCCCEEEEEECEEECC-----CCEEEEECCCEEEECCCCCHHHHHHHHHHHHHHH-----------CEEEECCCCC-CC
T ss_conf             98995799982207557-----9879970674054025577066665399998630-----------5774067579-99


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHCHHHHHHHHHHHHHHHH
Q ss_conf             98667878755567899899998667899999999998775587855988777700001100001688774345668888
Q 002649          245 PDSILKSDLVRPVLGGKEHPYPRRCRTGHPKSSKDPASESWSLSVYVPRDEAFSLLKTAQFSATGVYSALHAVIPFVESI  324 (896)
Q Consensus       245 Pd~~~~~~~~rpvlgg~~~pyPrr~rtgr~~~~~d~~~e~~~~~~yvPrDE~F~~~K~~~F~~~~~k~~~~~~~p~l~~~  324 (896)
                      |-+                             . ||.+.     .||||||+|++.|..+|.+++++++++.++   +++
T Consensus       149 p~~-----------------------------~-d~~~~-----~~lP~de~f~~~k~~~f~~~~~~~~~~~~~---~~~  190 (662)
T 1lox_A          149 ILN-----------------------------V-AGSKL-----TDLPVDERFLEDKKIDFEASLAWGLAELAL---KNS  190 (662)
T ss_dssp             CCE-----------------------------E-SCSSG-----GGSCGGGSCCHHHHHHHC-----------C---HHH
T ss_pred             CCC-----------------------------C-CCCCC-----CCCCCCCCCCCCCHHHHHHHHHHHHHHHHH---HHH
T ss_conf             654-----------------------------5-75544-----569941023742033455656888999999---998


Q ss_pred             HHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHH
Q ss_conf             60488999999889998721698899754466310010012232212467642233571001114225525089997774
Q 002649          325 LRIGKDKGFPSLEAIDKLFNEGVELPPEIEKLPSWLKILPNFFKSIANTGKDILRFETPETLKRDKLFWLRDEEFGRETL  404 (896)
Q Consensus       325 ~~~~~~~~f~~f~di~~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~fp~P~~~~~~~~~W~~DeeFarQ~L  404 (896)
                      ++  ...+|++|+||+++|..+. .+               +.+.+               +    ++|++|++||||+|
T Consensus       191 ~~--~~~~~~s~~d~~~lf~~~~-~~---------------~~~~~---------------~----~~W~~D~~F~~q~L  233 (662)
T 1lox_A          191 LN--ILAPWKTLDDFNRIFWCGR-SK---------------LARRV---------------R----DSWQEDSLFGYQFL  233 (662)
T ss_dssp             HG--GGSCCSSGGGGGGSC--CC-CH---------------HHHHH---------------H----HHTTCHHHHHHHHH
T ss_pred             HC--CCCCCCCHHHHHHHHHCCC-CC---------------CCHHH---------------H----HHHCCCHHHHHHHH
T ss_conf             60--5788667999998742256-65---------------30345---------------5----43206099999986


Q ss_pred             HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHCCCEEEEECCCCCCCCHHCCCCCCCCCC
Q ss_conf             08995210024579989999988879987623299999750897639999856958896055213610000137888511
Q 002649          405 AGLNPYGISLVADWPLKSTLDPETYGPTESAITKELIEKEIGGSMTVEEAIKQKKLFIIDYHDALLPYVEKVRQIKDTTL  484 (896)
Q Consensus       405 aG~NP~~Irr~~e~P~~s~Ldp~~yg~~~s~It~e~i~~~l~g~~tl~~al~~grLFi~Dy~d~~lp~l~~in~~~g~~~  484 (896)
                      ||+||++|+||+++|++            |+||++|++   +| +||++|+++|||||+|||+  |+.+ ++|.+.++++
T Consensus       234 ~G~NP~~I~~~~~~p~~------------~~vt~~~v~---~g-~tl~~a~~~~~lfi~Dy~~--l~~~-~~~~~~~~~~  294 (662)
T 1lox_A          234 NGANPMLLRRSVQLPAR------------LVFPPGMEE---LQ-AQLEKELKAGTLFEADFAL--LDNI-KANVILYCQQ  294 (662)
T ss_dssp             HSSCTTSCEECSSCCTT------------CCCCTTCHH---HH-HHHHHHHHTTCEEEEECGG--GTTC-CCCEETTEEC
T ss_pred             CCCCCHHEEECCCCCCC------------CCCCHHHHC---CC-CCHHHHHHCCCEEEEECHH--HCCC-CCCCCCCCCC
T ss_conf             48996200244668743------------679988956---78-7799998649889983243--3547-6665577633


Q ss_pred             C--CCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
Q ss_conf             0--12027964899943458999407999999998524518999999822789999999833223568888652102211
Q 002649          485 Y--GSRTVFFLNPDGTLRPLAIELTRPPMDGKPQWKQVFTPSTGNSTESWLWRLAKAHVLAHDSGYHQLISHWLRTHCCV  562 (896)
Q Consensus       485 Y--A~~~Lffl~~dG~L~PIAIqL~~p~~~~~~~~~~VfTP~d~~~~~~~~W~LAK~~v~~aD~~~HqlvsHllrTHlv~  562 (896)
                      |  ||+||||++++|+|+||||||+.|..++++  ++||||+|    ++|.|+|||+||++||+++||+++||++||+++
T Consensus       295 y~~Ap~~lf~l~~~g~L~PlAIql~~p~~~~~~--~~vftP~d----~~~~W~lAK~~v~~~D~~~Hqli~Hll~TH~~~  368 (662)
T 1lox_A          295 YLAAPLVMLKLQPDGKLMPMVIQLHLPKIGSSP--PPLFLPTD----PPMVWLLAKCWVRSSDFQVHELNSHLLRGHLMA  368 (662)
T ss_dssp             CCCCCEEEEEECTTSCEEEEEEECSCCCTTSCC--CCEECTTS----CHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHH
T ss_pred             CCCCCEEEEEECCCCCEEEEEEEEECCCCCCCC--CCEECCCC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             111546999988999786799997379887788--87687899----963899999999977888888888764567778


Q ss_pred             HHHHHHHHCCCCCCCCHHHHCCCCHHHHCCCHHHHHHCCCCCCCCCCCCCCCCHHH-HHHHHHHHHCCCCCCCCCCCHHH
Q ss_conf             46899770446876832230231002000032989760347896222355781579-99999997116778888985478
Q 002649          563 EPYVIATNRRLSAMHPINRLLKPHFRYTMEINALARKVLINADGIFETNFFPGKYC-MEFSSVIYDKHWRFDNEGLPKDL  641 (896)
Q Consensus       563 EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~~gGiie~~f~~G~~~-~elss~~Y~~~w~F~~~~lP~DL  641 (896)
                      |||+|||+||||.+|||||||.||||+||+||++||+.|||++|++|++|++|.++ ++|++.+|++ |+|++++||+||
T Consensus       369 E~~~iAt~R~Ls~~HPi~kLL~PH~r~tl~IN~~AR~~Li~~~G~i~~~~~~g~~~~~~l~~~~~~~-~~f~~~~lP~dL  447 (662)
T 1lox_A          369 EVFTVATMRCLPSIHPVFKLIVPHLRYTLEINVRARNGLVSDFGIFDQIMSTGGGGHVQLLQQAGAF-LTYRSFCPPDDL  447 (662)
T ss_dssp             HHHHHHHHHHCCTTSHHHHHHGGGGTTHHHHHHHHTTTTSSTTSHHHHHCTTTTTHHHHHHHHHHTT-CCGGGGSHHHHH
T ss_pred             HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCCHHHHHHHHHCC-CCCCCCCCCHHH
T ss_conf             8999986225886574124334788768877799997542888711232058842289999999716-754313576545


Q ss_pred             HHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             86299878999987654476789762112899999999998754302465546568688999999998205677789999
Q 002649          642 IRRGIAVEDPKAPHGLKLNIEDYPYANDGLDLWDALKQWVTNYVNHYYPDPSLVESDEELQAWWTEIRTVGHAEKKDEPW  721 (896)
Q Consensus       642 ~~RG~a~~D~~~~hgl~l~l~dYpYadDGL~IW~AI~~~V~~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~Gh~d~kd~p~  721 (896)
                      ++|||.            .|||||||+|||+||+||++||++||++||++|++|++|.|||+||+||+++||+|+++.+|
T Consensus       448 ~~RG~~------------~i~~YpY~~Dgl~iW~aI~~~V~~yv~~yY~~d~~V~~D~ELQaW~~Ei~~~G~~~~~~~~~  515 (662)
T 1lox_A          448 ADRGLL------------GVESSFYAQDALRLWEIISRYVQGIMGLYYKTDEAVRDDLELQSWCREITEIGLQGAQKQGF  515 (662)
T ss_dssp             HHTTCT------------TCTTCHHHHHHHHHHHHHHHHHHHHHTTTCSSHHHHHTCHHHHHHHHHHHTTTTTSGGGGTC
T ss_pred             HHCCCC------------CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf             646766------------56677544248999999999999999863798000247789999999998555777756899


Q ss_pred             CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHCCCCHHH
Q ss_conf             99989956799988452001333211113455200212699622138899999989168886310329999821999689
Q 002649          722 WPVLKTPQDLIEIITTIAWVASGHHAAVNFGQYLYGGYFPNRPTVARTNLPNEDQTKEEWKSFLEKPEAALLRCFPAQFQ  801 (896)
Q Consensus       722 ~P~l~T~~~Lv~~lT~iIf~aSa~HAAVNfgQy~y~gf~PN~P~~~r~p~P~~kkg~~e~~~~~~~pe~~~L~~lP~~~q  801 (896)
                      |++|+|+++||++||+|||+||+||||||||||+|+||+||+|++||+|||++ |.         .+++++|++||++.|
T Consensus       516 p~~l~t~~~Li~~lT~iI~~aS~~HAAVNfgQ~~y~g~~PN~P~~~r~p~P~~-k~---------~~~~~~l~~lP~~~~  585 (662)
T 1lox_A          516 PTSLQSVAQACHFVTMCIFTCTGQHSSIHLGQLDWFTWVPNAPCTMRLPPPTT-KD---------ATLETVMATLPNLKQ  585 (662)
T ss_dssp             CSSCCSHHHHHHHHHHHHHHTTHHHHHHHTTHHHHSSSGGGSCSCCSSCCCSS-SC---------CCHHHHHHHSCCHHH
T ss_pred             CCCCCCHHHHHHHHHEEEECCCHHHHHHCCCCCHHCCCCCCCCHHHCCCCCCC-CC---------CCHHHHHHHCCCHHH
T ss_conf             97566599999875343011212466551473100045668853326799988-89---------898899886987889


Q ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCC
Q ss_conf             99999999973178999754467789999993789999999999999999999762288210025788657720004799
Q 002649          802 ALTVMLVIDLLSTHSPDEEYLGKEMEPAWGDDPVIKAAFEEFNLKMQELERIIDDRNSNENLKNRTGAAIVPYELLKPFS  881 (896)
Q Consensus       802 a~~~m~~~~~LS~hs~de~yLG~~~~~~~~~d~~~~~a~~~F~~~L~~Ie~~I~~RN~~~~lknR~g~~~~PY~~L~Pss  881 (896)
                      |+.+|+++++||+|++||+|||+|++ .|+.|+++++|+++|+++|++||++|++||+++         .+||+||+|+ 
T Consensus       586 a~~~~~~~~~LS~~~~de~~LG~~~~-~~~~d~~~~~a~~~F~~~L~~ie~~I~~rN~~~---------~~PY~~L~P~-  654 (662)
T 1lox_A          586 SSLQMSIVWQLGRDQPIMVPLGQHQE-EYFSGPEPRAVLEKFREELAIMDKEIEVRNEKL---------DIPYEYLRPS-  654 (662)
T ss_dssp             HHHHHHHHHHTT--CCCCCBTTCCCC-CCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTS---------SSCCCTTCTT-
T ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC---------CCCCEEECCC-
T ss_conf             99999999996258877643146773-112587899999999999999999999970799---------9882247988-


Q ss_pred             CCCCCCCCCCCCCCC
Q ss_conf             999976887753249
Q 002649          882 EPGATGKGVPYSISI  896 (896)
Q Consensus       882 ~~g~t~~gIPnSIsI  896 (896)
                             ||||||||
T Consensus       655 -------~ipnSisI  662 (662)
T 1lox_A          655 -------IVENSVAI  662 (662)
T ss_dssp             -------TSBSSCCC
T ss_pred             -------CCCCCCCC
T ss_conf             -------98763139


No 5  
>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla}
Probab=1.00  E-value=1  Score=1343.24  Aligned_cols=644  Identities=25%  Similarity=0.439  Sum_probs=565.5

Q ss_pred             CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCC------CCEEEEEEEEE
Q ss_conf             379999851017998884431034544578779997226999983579989616999996799------97257289980
Q 002649           93 TLVLELVSAELDPETGKEKPTIKSRAHRSLFTDDDGNLKYKTEFDVPSNFGEVGAILVEADQL------TETFLKDIALD  166 (896)
Q Consensus        93 ~v~l~lvS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~~~------~e~fl~~i~l~  166 (896)
                      +|.+.|+.+.-+  +  +...|..+..  .....+...+|.++  + .++|++-.|.|+.+..      ..|||+.|+|.
T Consensus       393 ~V~i~L~G~~G~--S--~~~~L~~~~~--~~FeRGs~d~F~v~--~-~~LG~L~~IrI~hDnsG~~~~~~~Wfl~~V~V~  463 (1066)
T 3dy5_A          393 TITIRITGAKGR--T--DYLKLDKWFH--NDFEAGSKEQYTVQ--G-FDVGDIQLIELHSDGGGYWSGDPDWFVNRVIII  463 (1066)
T ss_dssp             CCEEEEEESSCB--C--CCEEC---------CCTTCEEEEEEE--C-SCCSSEEEEEEECCCCC--CCCCCEEEEEEEEE
T ss_pred             EEEEEEEECCCC--E--EEEEECCCCC--CCCCCCCCCEEEEE--E-ECCCCCEEEEEEECCCCCCCCCCCEEEEEEEEE
T ss_conf             238999978995--5--3178378876--75344871269999--7-137873389999789887778997388689998


Q ss_pred             CCCCC-CEEEECCCCCCCCCCCCCCEEEEEC-CCCCCCCCC-HHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCC
Q ss_conf             04898-3897317764589779764288307-301568997-57689999999964089987643457154143445799
Q 002649          167 GLRNG-PVNIACDSWIQPKIVDKQKRIFFTN-KSYLPSQTP-NGLARLRAEELNNLQGDGQGERKIHERIYDYDVYNDLG  243 (896)
Q Consensus       167 ~~p~g-~~~F~c~sWv~~~~~~~~~riff~n-~~yLp~~tp-~~l~~~R~~EL~~lrg~g~g~r~~~driYdy~~yndlG  243 (896)
                      +...| .++||||+|+...       +.++. +|+||++++ +.|+++|++||+++|           +.|+|+.|.+ |
T Consensus       464 ~~~tg~~~~Fpc~rWL~~d-------~~lr~G~a~l~~~d~~p~~~~~R~~EL~~rr-----------~~Y~w~~~~~-g  524 (1066)
T 3dy5_A          464 SSTQDRVYSFPCFRWVIKD-------MVLFPGEATLPFNEVPAIVSEQRQKELEQRK-----------LTYQWDYVSD-D  524 (1066)
T ss_dssp             ESSSSSCEEEEEEEEESSE-------EEECCSSCCCSCSCCCHHHHHHHHHHHHHHH-----------HHSCEECSST-T
T ss_pred             ECCCCCEEEEEHHHHCCCC-------EEECCCCEEECCCCCCHHHHHHHHHHHHHHH-----------HHEECCCCCC-C
T ss_conf             3899978997602405677-------1753672140456777689999999999877-----------5430676789-9


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHCHHHHHHHHHHHHHHH
Q ss_conf             99866787875556789989999866789999999999877558785598877770000110000168877434566888
Q 002649          244 MPDSILKSDLVRPVLGGKEHPYPRRCRTGHPKSSKDPASESWSLSVYVPRDEAFSLLKTAQFSATGVYSALHAVIPFVES  323 (896)
Q Consensus       244 ~Pd~~~~~~~~rpvlgg~~~pyPrr~rtgr~~~~~d~~~e~~~~~~yvPrDE~F~~~K~~~F~~~~~k~~~~~~~p~l~~  323 (896)
                      .|.+         +.+..                          ..+||+|+||++.|..+|.....++++...+   ++
T Consensus       525 ~p~~---------~~~~~--------------------------~~~LP~~~~f~~~k~~~~~~~~~~~~~~~~~---~~  566 (1066)
T 3dy5_A          525 MPGN---------IKAKT--------------------------HDDLPRDVQFTDEKSRSYQESRKAALVNLGI---GS  566 (1066)
T ss_dssp             SCCE---------ECCSS--------------------------TTTSCGGGSCCHHHHHHHHHHHHHHHTGGGT---SC
T ss_pred             CCCC---------CCCCC--------------------------HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH---HH
T ss_conf             8641---------14454--------------------------2128800030022002467777788876434---33


Q ss_pred             HHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHH
Q ss_conf             86048899999988999872169889975446631001001223221246764223357100111422552508999777
Q 002649          324 ILRIGKDKGFPSLEAIDKLFNEGVELPPEIEKLPSWLKILPNFFKSIANTGKDILRFETPETLKRDKLFWLRDEEFGRET  403 (896)
Q Consensus       324 ~~~~~~~~~f~~f~di~~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~fp~P~~~~~~~~~W~~DeeFarQ~  403 (896)
                      +++  ...+|++|+|+++||+.+. .+               +.+++.                   .+|++|+|||||+
T Consensus       567 ~~~--~~~~w~~l~d~~~~f~~~~-~~---------------~~~~v~-------------------~~W~~D~~F~~Q~  609 (1066)
T 3dy5_A          567 LFT--MFENWDSYDDYHILYRNWI-LG---------------GTPNMA-------------------DRWHEDRWFGYQF  609 (1066)
T ss_dssp             C--------------------------------------------------------------------CCSHHHHHHHH
T ss_pred             HHH--HCCCCCCHHHHHHHHCCCC-CC---------------CCHHHH-------------------HHCCCHHHHHHHH
T ss_conf             442--2036467999999846788-78---------------787786-------------------5503859999987


Q ss_pred             HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHCCCEEEEECCCC--CC----CCHHCC-
Q ss_conf             40899521002457998999998887998762329999975089763999985695889605521--36----100001-
Q 002649          404 LAGLNPYGISLVADWPLKSTLDPETYGPTESAITKELIEKEIGGSMTVEEAIKQKKLFIIDYHDA--LL----PYVEKV-  476 (896)
Q Consensus       404 LaG~NP~~Irr~~e~P~~s~Ldp~~yg~~~s~It~e~i~~~l~g~~tl~~al~~grLFi~Dy~d~--~l----p~l~~i-  476 (896)
                      |||+||++||||+++|++            |+||++|++..|++++||++||++|||||+|||++  ++    ||+++| 
T Consensus       610 L~G~NP~~I~r~~~~P~~------------~~vt~~~v~~~l~~g~tl~~al~~grLfi~Dy~~l~~~~~~~~p~~~~i~  677 (1066)
T 3dy5_A          610 LNGANPVILTRCDALPSN------------FPVTNEHVNASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIG  677 (1066)
T ss_dssp             HTTSCCSSEEECSSCCTT------------CCCCTTTTTTTCCSSSCSHHHHTTSCEEEEECGGGTTCCCSSSCCCCTTC
T ss_pred             HCCCCCCEEEECCCCCCC------------CCCCHHHHHHHCCCCCCHHHHHHCCCEEEEECHHHHCCCCCCCCCHHHCC
T ss_conf             648998137872346745------------67888999865068987999987599999964554332434552010002


Q ss_pred             -----CCCCCCC----CCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             -----3788851----1012027964899943458999407999999998524518999999822789999999833223
Q 002649          477 -----RQIKDTT----LYGSRTVFFLNPDGTLRPLAIELTRPPMDGKPQWKQVFTPSTGNSTESWLWRLAKAHVLAHDSG  547 (896)
Q Consensus       477 -----n~~~g~~----~YA~~~Lffl~~dG~L~PIAIqL~~p~~~~~~~~~~VfTP~d~~~~~~~~W~LAK~~v~~aD~~  547 (896)
                           |.+++++    .|||+||||++++|+|+||||||+|+|++.    ++||||+| +  ++|+|+|||+||++||++
T Consensus       678 ~~~~~n~~~~~~~~~y~~Ap~~Lf~l~~~g~L~PlAIqL~~~p~~~----~piftP~d-~--~~~~W~lAK~~v~~~D~~  750 (1066)
T 3dy5_A          678 YKVPDHLKHDEADIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPE----NPIWTPHE-E--NEHDWMMAKFWLGVAESN  750 (1066)
T ss_dssp             ----------CCCCCBCCCCEEEEEECTTSCEEEEEEESSSSCSSS----SCEECTTC-S--SHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCEECCCCEEEEEECCCCCEEEEEEEEECCCCCC----CCEECCCC-C--CCCHHHHHHHHHHHHHHH
T ss_conf             2234454577655414137579999858998614999974799998----97577899-9--865699999999755788


Q ss_pred             HHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHCCCCHHHHCCCHHHHHHCCCCCCCCCCCCCCCC-HHHHHHHHHHH
Q ss_conf             56888865210221146899770446876832230231002000032989760347896222355781-57999999997
Q 002649          548 YHQLISHWLRTHCCVEPYVIATNRRLSAMHPINRLLKPHFRYTMEINALARKVLINADGIFETNFFPG-KYCMEFSSVIY  626 (896)
Q Consensus       548 ~HqlvsHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~~gGiie~~f~~G-~~~~elss~~Y  626 (896)
                      +||+++||++||+++|||+|||+||||.+|||||||.||||+||+||++||+.|||+||+||+++++| +++++|++++|
T Consensus       751 ~Hqlv~Hll~THlv~E~f~iAt~R~Ls~~HPi~kLL~PH~r~Tl~IN~~AR~~Li~~gG~id~~~~~g~~~~~~l~~~~y  830 (1066)
T 3dy5_A          751 FHQLNTHLLRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELIGSGGIVDQSLSLGGGGHVTFMEKCF  830 (1066)
T ss_dssp             HHHTCCCCCTTTHHHHHHHHHHHHHCCTTCHHHHHHHHHHTTHHHHHHHTTTTTSSTTSSTTTSSSSTTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHCCCHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHH
T ss_conf             88888887302577899999974139976744554406664041136798952328997202442377526999999998


Q ss_pred             HCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             11677888898547886299878999987654476789762112899999999998754302465546568688999999
Q 002649          627 DKHWRFDNEGLPKDLIRRGIAVEDPKAPHGLKLNIEDYPYANDGLDLWDALKQWVTNYVNHYYPDPSLVESDEELQAWWT  706 (896)
Q Consensus       627 ~~~w~F~~~~lP~DL~~RG~a~~D~~~~hgl~l~l~dYpYadDGL~IW~AI~~~V~~yv~~YY~~D~~V~~D~ELQaW~~  706 (896)
                      ++ |+|++++||+||++|||++++         .|||||||+|||+||+||++||++||++||++|++|++|.|||+||+
T Consensus       831 ~~-~~f~~~~lP~dL~~RG~~~~~---------~l~~YpY~~Dgl~iW~aI~~~V~~~v~~yY~~D~~V~~D~ELQaW~~  900 (1066)
T 3dy5_A          831 KE-VNLQDYHLPNALKKRGVDDPS---------KLPGFYYRDDGLALWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIY  900 (1066)
T ss_dssp             TT-CCGGGGCHHHHHHHTTCCCTT---------TSCCCHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHCHHHHHHHH
T ss_pred             HC-CEECCCCCCHHHHHCCCCCCC---------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
T ss_conf             33-721567784246655897733---------36898247769999999999999999863899502057899999999


Q ss_pred             HHHHCCC---CCCCCCCCCC-CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             9982056---7778999999-98995679998845200133321111345520021269962213889999998916888
Q 002649          707 EIRTVGH---AEKKDEPWWP-VLKTPQDLIEIITTIAWVASGHHAAVNFGQYLYGGYFPNRPTVARTNLPNEDQTKEEWK  782 (896)
Q Consensus       707 Ei~~~Gh---~d~kd~p~~P-~l~T~~~Lv~~lT~iIf~aSa~HAAVNfgQy~y~gf~PN~P~~~r~p~P~~kkg~~e~~  782 (896)
                      ||+++||   +|+++. ||| +|+|+++||++||+|||+||+||||||||||+|+||+||+|++||+|||++| |..   
T Consensus       901 Ei~~~G~~~~~~~~~~-g~P~~l~t~~~Lv~~lT~iI~~aS~qHAAVNfgQ~~~~~~~PN~P~~~r~p~P~~k-g~~---  975 (1066)
T 3dy5_A          901 DVHKNGWRVNPGHQDH-GVPASFESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPPKKK-GEA---  975 (1066)
T ss_dssp             HHHHTTSCCCTTCCCC-CCCSSCCSHHHHHHHHHHHHHHHTHHHHHHHSTTC-------CCCSCBSSCCCSST-TCC---
T ss_pred             HHHHCCCCCCCCCCCC-CCCCCCCCHHHHHHHHHEEHHHCCCHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCC-CCC---
T ss_conf             9963466656777655-56655788999998874512012402331045755201146888544368999898-888---


Q ss_pred             HHHHCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             63103299998219996899999999997317899975446778999999378999999999999999999976228821
Q 002649          783 SFLEKPEAALLRCFPAQFQALTVMLVIDLLSTHSPDEEYLGKEMEPAWGDDPVIKAAFEEFNLKMQELERIIDDRNSNEN  862 (896)
Q Consensus       783 ~~~~~pe~~~L~~lP~~~qa~~~m~~~~~LS~hs~de~yLG~~~~~~~~~d~~~~~a~~~F~~~L~~Ie~~I~~RN~~~~  862 (896)
                           +++++|++||++.||+.+|+++++||+|++||+|||+|++++|+ |+++++|+++|+++|++||++|++||++. 
T Consensus       976 -----~~~~~l~~LP~~~~~~~~~~~~~~LS~~~~de~~Lg~y~~~~~~-d~~~~~a~~~F~~~L~~i~~~I~~RN~~~- 1048 (1066)
T 3dy5_A          976 -----TLQSILSTLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAWE-DKDALDAINRFQDKLEDISKKIKQRNENL- 1048 (1066)
T ss_dssp             -----CHHHHHHHSCCHHHHHHHHHHHHHHTCCCTTCCBTTCCTTSCCC-SHHHHHHHHHHHHHHHHHHHHHHHHTTSC-
T ss_pred             -----CHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHCCC-
T ss_conf             -----87779876899044089999999855788886230357841137-88999999999999999999999971799-


Q ss_pred             CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             0025788657720004799999976887753249
Q 002649          863 LKNRTGAAIVPYELLKPFSEPGATGKGVPYSISI  896 (896)
Q Consensus       863 lknR~g~~~~PY~~L~Pss~~g~t~~gIPnSIsI  896 (896)
                              ++||+||+|+        +|||||||
T Consensus      1049 --------~~pY~~L~P~--------~IpnSIsI 1066 (1066)
T 3dy5_A         1049 --------EVPYIYLLPE--------RIPNGTAI 1066 (1066)
T ss_dssp             --------SSCCCTTSTT--------SCBSSCCC
T ss_pred             --------CCCCCCCCCC--------CCCCEEEC
T ss_conf             --------9884007988--------88763059


No 6  
>3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B
Probab=1.00  E-value=1  Score=1339.39  Aligned_cols=639  Identities=27%  Similarity=0.439  Sum_probs=565.7

Q ss_pred             CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEECC---CCCEEEEEEEEECCC
Q ss_conf             37999985101799888443103454457877999722699998357998961699999679---997257289980048
Q 002649           93 TLVLELVSAELDPETGKEKPTIKSRAHRSLFTDDDGNLKYKTEFDVPSNFGEVGAILVEADQ---LTETFLKDIALDGLR  169 (896)
Q Consensus        93 ~v~l~lvS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~~---~~e~fl~~i~l~~~p  169 (896)
                      +|.+.|+.+.-+  ++  ...|..     .....|...+|.+  .++.++|++-.|.|+.+.   ...|||+.|+|.+ +
T Consensus        41 ~V~I~L~G~~G~--S~--~~~L~~-----~~FeRG~~D~F~v--~~~~~LG~L~~IrI~hDnsG~~~~Wfl~~V~V~~-~  108 (691)
T 3v98_A           41 YIYLSLVGSAGC--SE--KHLLDK-----GSFERGAVDSYDV--TVDEELGEIQLVRIEKRKYGSNDDWYLKYITLKT-P  108 (691)
T ss_dssp             EEEEEEEESSCB--CC--CEECCS-----SCBCTTCEEEEEE--CCSSCCCSEEEEEEEEECSSSCCCEEEEEEEEEC-T
T ss_pred             EEEEEEEECCCC--EE--EEEECC-----CCCCCCCEEEEEE--EECCCCCCCEEEEEEECCCCCCCCEEEEEEEEEC-C
T ss_conf             207999978996--64--388168-----7635797659999--8036778855999997898799985870799987-9


Q ss_pred             CC-CEEEECCCCCCCCCCCCCCEEEEEC-CCCCCCCCC-HHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCC
Q ss_conf             98-3897317764589779764288307-301568997-57689999999964089987643457154143445799998
Q 002649          170 NG-PVNIACDSWIQPKIVDKQKRIFFTN-KSYLPSQTP-NGLARLRAEELNNLQGDGQGERKIHERIYDYDVYNDLGMPD  246 (896)
Q Consensus       170 ~g-~~~F~c~sWv~~~~~~~~~riff~n-~~yLp~~tp-~~l~~~R~~EL~~lrg~g~g~r~~~driYdy~~yndlG~Pd  246 (896)
                      .| .++||||+|+...+     .+.++. +|+||+++. +.|+++|++||+++|           +.|+|+.|.+ |.|.
T Consensus       109 ~g~~~~Fpc~rWL~~d~-----~l~l~~g~a~~~~~d~~~~~~~~R~~El~~r~-----------~~y~W~~~~~-G~p~  171 (691)
T 3v98_A          109 HGDYIEFPCYRWITGDV-----EVVLRDGRAKLARDDQIHILKQHRRKELETRQ-----------KQYRWMEWNP-GFPL  171 (691)
T ss_dssp             TSCEEEEEEEEEECSSS-----CEEEECSSCCCGGGCCSHHHHHHHHHHHHHHH-----------HHSCEECSST-TSCC
T ss_pred             CCCEEEEEHHHHCCCCC-----EEEECCCCEEECCCCCCHHHHHHHHHHHHHHH-----------HHCCCCCCCC-CCCC
T ss_conf             99589976478318997-----79971772250145778799999999999988-----------6503788889-9965


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHH
Q ss_conf             66787875556789989999866789999999999877558785598877770000110000168877434566888860
Q 002649          247 SILKSDLVRPVLGGKEHPYPRRCRTGHPKSSKDPASESWSLSVYVPRDEAFSLLKTAQFSATGVYSALHAVIPFVESILR  326 (896)
Q Consensus       247 ~~~~~~~~rpvlgg~~~pyPrr~rtgr~~~~~d~~~e~~~~~~yvPrDE~F~~~K~~~F~~~~~k~~~~~~~p~l~~~~~  326 (896)
                      +         +.+.+                          ...||+|+||++.|..+|.....+++++..+   +++++
T Consensus       172 ~---------i~~~~--------------------------~~~Lp~~~~f~~~k~~~f~~~~~~~~~~~~l---~~~~~  213 (691)
T 3v98_A          172 S---------IDAKC--------------------------HKDLPRDIQFDSEKGVDFVLNYSKAMENLFI---NRFMH  213 (691)
T ss_dssp             E---------ESCSS--------------------------GGGSCGGGSCSSSSSSCHHHHHHHHHHHTTC---GGGTT
T ss_pred             C---------CCCCC--------------------------CCCCCCCCCCCHHCCCHHHHHHHHHHHHHHH---CCHHH
T ss_conf             1---------15576--------------------------0018800031101020256666777776301---00354


Q ss_pred             CCCCC-CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHH
Q ss_conf             48899-99998899987216988997544663100100122322124676422335710011142255250899977740
Q 002649          327 IGKDK-GFPSLEAIDKLFNEGVELPPEIEKLPSWLKILPNFFKSIANTGKDILRFETPETLKRDKLFWLRDEEFGRETLA  405 (896)
Q Consensus       327 ~~~~~-~f~~f~di~~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~fp~P~~~~~~~~~W~~DeeFarQ~La  405 (896)
                        ... +|++|+|++++|... +.+               +++++.                   .+|++|+|||||+||
T Consensus       214 --~~~~~w~~l~D~~~if~~~-~~~---------------~~~~v~-------------------~~W~~D~~F~~Q~La  256 (691)
T 3v98_A          214 --MFQSSWNDFADFEKIFVKI-SNT---------------ISERVM-------------------NHWQEDLMFGYQFLN  256 (691)
T ss_dssp             --CTTCCCSSHHHHHHHHTTT-CCH---------------HHHHHH-------------------HHTTSHHHHHHHHHH
T ss_pred             --HCCCCCCCHHHHHHHHCCC-CCC---------------CCHHHH-------------------HHHCCHHHHHHHHHC
T ss_conf             --3147868899999981788-888---------------757676-------------------650276999998864


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHCCCEEEEECCCCCCCCHHCCCCCCCCC--
Q ss_conf             899521002457998999998887998762329999975089763999985695889605521361000013788851--
Q 002649          406 GLNPYGISLVADWPLKSTLDPETYGPTESAITKELIEKEIGGSMTVEEAIKQKKLFIIDYHDALLPYVEKVRQIKDTT--  483 (896)
Q Consensus       406 G~NP~~Irr~~e~P~~s~Ldp~~yg~~~s~It~e~i~~~l~g~~tl~~al~~grLFi~Dy~d~~lp~l~~in~~~g~~--  483 (896)
                      |+||++||||+++|++            |+||++|++..|++++||++||++|||||+|||  +|+++ ++|.+++++  
T Consensus       257 G~NP~~I~r~~~~P~~------------~~vt~~~v~~~l~~g~tl~~al~~grLfi~Dy~--~l~~i-~~n~~~~~~~~  321 (691)
T 3v98_A          257 GANPVLIRRCTELPEK------------LPVTTEMVECSLERQLSLEQEVQQGNIFIVDFE--LLDGI-DANKTDPCTLQ  321 (691)
T ss_dssp             SSCTTSCEECSSCCTT------------CCCCHHHHTTTCCSSCCHHHHHHTTCEEEEECG--GGTTC-CCCCSCTTSCC
T ss_pred             CCCCCEEEECCCCCCC------------CCCCHHHHHHHCCCCCCHHHHHHCCCEEEEECH--HHCCC-CCCCCCCCCCC
T ss_conf             8998016872568856------------899999998642689869999875999999424--53366-66656886342


Q ss_pred             -CCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
Q ss_conf             -1012027964899943458999407999999998524518999999822789999999833223568888652102211
Q 002649          484 -LYGSRTVFFLNPDGTLRPLAIELTRPPMDGKPQWKQVFTPSTGNSTESWLWRLAKAHVLAHDSGYHQLISHWLRTHCCV  562 (896)
Q Consensus       484 -~YA~~~Lffl~~dG~L~PIAIqL~~p~~~~~~~~~~VfTP~d~~~~~~~~W~LAK~~v~~aD~~~HqlvsHllrTHlv~  562 (896)
                       .|||+||||++++|+|+||||||+|+|+++    ++||||+|    ++|+|+|||+||++||+++||+++||++||+++
T Consensus       322 y~~Ap~~Lf~l~~~g~L~PlAIqL~~~p~~~----~piftP~d----~~~~W~lAK~~v~~~D~~~Hql~~Hll~THlv~  393 (691)
T 3v98_A          322 FLAAPICLLYKNLANKIVPIAIQLNQIPGDE----NPIFLPSD----AKYDWLLAKIWVRSSDFHVHQTITHLLRTHLVS  393 (691)
T ss_dssp             CCCCCEEEEEECTTSCEEEEEEESSSSCBTT----BCEECTTS----CHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHH
T ss_pred             EECCCEEEEEECCCCCEEEEEEEEECCCCCC----CCEECCCC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             0027579999868997624899961699898----97573799----952799999999746899999998861136778


Q ss_pred             HHHHHHHHCCCCCCCCHHHHCCCCHHHHCCCHHHHHHCCCCCCCCCCCCCCCC-HHHHHHHHHHHHCCCCCCCCCCCHHH
Q ss_conf             46899770446876832230231002000032989760347896222355781-57999999997116778888985478
Q 002649          563 EPYVIATNRRLSAMHPINRLLKPHFRYTMEINALARKVLINADGIFETNFFPG-KYCMEFSSVIYDKHWRFDNEGLPKDL  641 (896)
Q Consensus       563 EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~~gGiie~~f~~G-~~~~elss~~Y~~~w~F~~~~lP~DL  641 (896)
                      |||+|||+||||.+|||||||.||||+||+||++||+.|||+||++|+++++| +++++|++++|++ |+|++++||+||
T Consensus       394 E~f~vAt~R~L~~~HPi~kLL~PH~r~tl~IN~~Ar~~Li~~gG~i~~~~~~g~~~~~~l~~~~~~~-~~f~~~~lP~dL  472 (691)
T 3v98_A          394 EVFGIAMYRQLPAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAMKD-LTYASLCFPEAI  472 (691)
T ss_dssp             HHHHHHHHHHCCTTSHHHHHHGGGSTTHHHHHHHHHHHTSSTTCTHHHHCTTTTTHHHHHHHHHHTT-CCSGGGSHHHHH
T ss_pred             HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHC-CCCCCCCCHHHH
T ss_conf             9999997413887674677635777646421189996230899713455136720499999999844-630656683779


Q ss_pred             HHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             86299878999987654476789762112899999999998754302465546568688999999998205677789999
Q 002649          642 IRRGIAVEDPKAPHGLKLNIEDYPYANDGLDLWDALKQWVTNYVNHYYPDPSLVESDEELQAWWTEIRTVGHAEKKDEPW  721 (896)
Q Consensus       642 ~~RG~a~~D~~~~hgl~l~l~dYpYadDGL~IW~AI~~~V~~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~Gh~d~kd~p~  721 (896)
                      ++|||+++|         .|||||||+|||+||+||++||++||++||++|++|++|.|||+||+||+++||+|+++. |
T Consensus       473 ~~RG~~~~~---------~l~~YpY~dDgl~iW~aI~~~V~~~v~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~~~~~~-g  542 (691)
T 3v98_A          473 KARGMESKE---------DIPYYFYRDDGLLVWEAIRTFTAEVVDIYYEGDQVVEEDPELQDFVNDVYVYGMRGRKSS-G  542 (691)
T ss_dssp             HHTTCCCTT---------TCTTCHHHHHHHHHHHHHHHHHHHHHHHHCSSHHHHHTCHHHHHHHHHHHHTTTTTCGGG-C
T ss_pred             HHCCCCCCC---------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCC-C
T ss_conf             866896401---------388983477799999999999999998747983674277999999999973446777555-6


Q ss_pred             CC-CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHCCCCHH
Q ss_conf             99-98995679998845200133321111345520021269962213889999998916888631032999982199968
Q 002649          722 WP-VLKTPQDLIEIITTIAWVASGHHAAVNFGQYLYGGYFPNRPTVARTNLPNEDQTKEEWKSFLEKPEAALLRCFPAQF  800 (896)
Q Consensus       722 ~P-~l~T~~~Lv~~lT~iIf~aSa~HAAVNfgQy~y~gf~PN~P~~~r~p~P~~kkg~~e~~~~~~~pe~~~L~~lP~~~  800 (896)
                      || +|+|+++||++||+|||+||+||||||||||+|+||+||+|++||+|||++| |..        +++++|++||++.
T Consensus       543 ~P~~l~T~~~Lv~~lT~iIf~aSaqHAAVNfgQ~~y~g~~PN~P~~~r~p~P~~k-g~~--------~~~~~l~~LP~~~  613 (691)
T 3v98_A          543 FPKSVKSREQLSEYLTVVIFTASAQHAAVNFGQYDWASWIPNAPPTMRAPPPTAK-GVV--------TIEQIVDTLPDRG  613 (691)
T ss_dssp             CCSCCCSHHHHHHHHHHHHHHHTHHHHHHHTTHHHHHSSGGGSCSCCSSCCCCSS-SCC--------CHHHHHHHSCCHH
T ss_pred             CCCCCCCHHHHHHHHHEEHHHCCCHHHHCCCCCCCEEEECCCCCHHHCCCCCCCC-CCC--------CHHHHHHHCCCHH
T ss_conf             7656788999998873512012403331045755302035888555468999998-887--------7778987788878


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCC
Q ss_conf             99999999997317899975446778999999378999999999999999999976228821002578865772000479
Q 002649          801 QALTVMLVIDLLSTHSPDEEYLGKEMEPAWGDDPVIKAAFEEFNLKMQELERIIDDRNSNENLKNRTGAAIVPYELLKPF  880 (896)
Q Consensus       801 qa~~~m~~~~~LS~hs~de~yLG~~~~~~~~~d~~~~~a~~~F~~~L~~Ie~~I~~RN~~~~lknR~g~~~~PY~~L~Ps  880 (896)
                      ||+.+|+++++||+|++||+|||+|+++ |+.|+++++|+++|+++|++||++|++||+++         ++||+||+|+
T Consensus       614 ~a~~~~~~~~~LS~~~~de~~LG~y~~~-~f~d~~~~~a~~~F~~~L~~ie~~I~~RN~~~---------~~PY~~L~P~  683 (691)
T 3v98_A          614 RSCWHLGAVWALSQFQENELFLGMYPEE-HFIEKPVKEAMARFRKNLEAIVSVIAERNENL---------QLPYYYLDPD  683 (691)
T ss_dssp             HHHHHHHHHHHHTCCCTTCCBTTCCCSC-SCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTC---------SSCCCTTCGG
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC---------CCCCCCCCCC
T ss_conf             8899999999845788887440358841-12787999999999999999999999972899---------9884007988


Q ss_pred             CCCCCCCCCCCCCCCC
Q ss_conf             9999976887753249
Q 002649          881 SEPGATGKGVPYSISI  896 (896)
Q Consensus       881 s~~g~t~~gIPnSIsI  896 (896)
                              +|||||||
T Consensus       684 --------~IpnSIsI  691 (691)
T 3v98_A          684 --------RIPNSVAI  691 (691)
T ss_dssp             --------GCBSSCCC
T ss_pred             --------CCCCEEEC
T ss_conf             --------98764159


No 7  
>3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A
Probab=1.00  E-value=1  Score=1330.48  Aligned_cols=641  Identities=24%  Similarity=0.433  Sum_probs=565.4

Q ss_pred             CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCC------CCEEEEEEEEE
Q ss_conf             379999851017998884431034544578779997226999983579989616999996799------97257289980
Q 002649           93 TLVLELVSAELDPETGKEKPTIKSRAHRSLFTDDDGNLKYKTEFDVPSNFGEVGAILVEADQL------TETFLKDIALD  166 (896)
Q Consensus        93 ~v~l~lvS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~~~------~e~fl~~i~l~  166 (896)
                      +|.+.|+.+.-.  +  +...|..     .....|...+|.++  + .++|++-.|.|+.+..      ..|||+.|+|.
T Consensus        26 ~V~I~L~G~~G~--S--~~~~L~~-----~~FeRGs~d~F~v~--~-~dLG~L~~IrI~hDnsg~G~~~~~Wf~~~V~V~   93 (696)
T 3fg1_A           26 TITIRITGAKGR--T--DYLKLDK-----GSFEAGSKEQYTVQ--G-FDVGDIQLIELHSDGGGYWSGDPDWFVNRVIII   93 (696)
T ss_dssp             CEEEEEEETTEE--C--CCEEECS-----SCBCTTCEEEEEEE--E-ECCSSEEEEEEEECCCCTTCSCCCEEEEEEEEE
T ss_pred             EEEEEEEECCCC--E--EEEEECC-----CCCCCCCCCEEEEE--E-CCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEE
T ss_conf             448999978986--6--4388178-----77578970379999--7-148884588999789677777888476279999


Q ss_pred             CCCCC-CEEEECCCCCCCCCCCCCCEEEEEC-CCCCCCCCC-HHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCC
Q ss_conf             04898-3897317764589779764288307-301568997-57689999999964089987643457154143445799
Q 002649          167 GLRNG-PVNIACDSWIQPKIVDKQKRIFFTN-KSYLPSQTP-NGLARLRAEELNNLQGDGQGERKIHERIYDYDVYNDLG  243 (896)
Q Consensus       167 ~~p~g-~~~F~c~sWv~~~~~~~~~riff~n-~~yLp~~tp-~~l~~~R~~EL~~lrg~g~g~r~~~driYdy~~yndlG  243 (896)
                      +...| .++||||+|+...       +.++. +|+||++++ +.|+++|++||+++|           +.|+|+.|.+ |
T Consensus        94 ~~~tg~~~~Fpc~rWL~~d-------l~lreG~a~l~~~d~~~~~~~~R~~el~~r~-----------~~y~w~~~~~-G  154 (696)
T 3fg1_A           94 SSTQDRVYSFPCFRWVIKD-------MVLFPGEATLPFNEVPAIVSEQRQKELEQRK-----------LTYQWDYVSD-D  154 (696)
T ss_dssp             ETTCSSCEEEEEEEEESSE-------EEECCSSCCCTTSCCCHHHHHHHHHHHHHHH-----------HHSCEECSST-T
T ss_pred             ECCCCCEEEEEHHHHCCCC-------EEECCCCEECCCCCCCHHHHHHHHHHHHHHH-----------HEECCCCCCC-C
T ss_conf             4899958996744614687-------0754763243555663899999999999746-----------4040788889-9


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHCHHHHHHHHHHHHHHH
Q ss_conf             99866787875556789989999866789999999999877558785598877770000110000168877434566888
Q 002649          244 MPDSILKSDLVRPVLGGKEHPYPRRCRTGHPKSSKDPASESWSLSVYVPRDEAFSLLKTAQFSATGVYSALHAVIPFVES  323 (896)
Q Consensus       244 ~Pd~~~~~~~~rpvlgg~~~pyPrr~rtgr~~~~~d~~~e~~~~~~yvPrDE~F~~~K~~~F~~~~~k~~~~~~~p~l~~  323 (896)
                      .|.+         +.+..                          ...||+|+||++.|..+|.....+++++..+   ++
T Consensus       155 ~p~~---------i~~~~--------------------------~~~Lp~~~~f~~~k~~~~~~~~~~~~~~~~~---~~  196 (696)
T 3fg1_A          155 MPGN---------IKAKT--------------------------HDDLPRDVQFTDEKSRSYQESRKAALVNLGI---GS  196 (696)
T ss_dssp             SCCE---------ECCSS--------------------------GGGSCGGGSCCHHHHHHHHHHHHHHHHHHHH---HH
T ss_pred             CCCE---------ECCCC--------------------------CCCCCHHHCCCCCCCCHHHHHHHHHHHHHHH---HH
T ss_conf             8640---------04465--------------------------0018820121321332156667778876544---43


Q ss_pred             HHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHH
Q ss_conf             86048899999988999872169889975446631001001223221246764223357100111422552508999777
Q 002649          324 ILRIGKDKGFPSLEAIDKLFNEGVELPPEIEKLPSWLKILPNFFKSIANTGKDILRFETPETLKRDKLFWLRDEEFGRET  403 (896)
Q Consensus       324 ~~~~~~~~~f~~f~di~~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~fp~P~~~~~~~~~W~~DeeFarQ~  403 (896)
                      +++  ...+|++|+|++++|... +.+               +.+++.                   .+|++|+|||||+
T Consensus       197 ~~~--~~~~w~~l~d~~~~f~~~-~~~---------------~~~~v~-------------------~~W~~D~~F~~Q~  239 (696)
T 3fg1_A          197 LFT--MFENWDSYDDYHILYRNW-ILG---------------GTPNMA-------------------DRWHEDRWFGYQF  239 (696)
T ss_dssp             HHT--TTCCCCSGGGGGGGGTTS-CCS---------------SSCTTT-------------------TTTTSHHHHHHHH
T ss_pred             HHH--HCCCCCCHHHHHHHHCCC-CCC---------------CCHHHH-------------------HHCCCHHHHHHHH
T ss_conf             432--146878899999984788-888---------------666676-------------------5505859999988


Q ss_pred             HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHCCCEEEEECCCC--CCC----CHHCC-
Q ss_conf             40899521002457998999998887998762329999975089763999985695889605521--361----00001-
Q 002649          404 LAGLNPYGISLVADWPLKSTLDPETYGPTESAITKELIEKEIGGSMTVEEAIKQKKLFIIDYHDA--LLP----YVEKV-  476 (896)
Q Consensus       404 LaG~NP~~Irr~~e~P~~s~Ldp~~yg~~~s~It~e~i~~~l~g~~tl~~al~~grLFi~Dy~d~--~lp----~l~~i-  476 (896)
                      |||+||++||||+++|++            |+||++|++..|++++||++|+++|||||+|||++  +++    |+++| 
T Consensus       240 L~G~NP~~I~r~~~~P~~------------~~vt~~~v~~~l~~g~tl~~al~~grLfi~Dy~~l~~~~~~~~~~~~~i~  307 (696)
T 3fg1_A          240 LNGANPVILTRCDALPSN------------FPVTNEHVNASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIG  307 (696)
T ss_dssp             HHSSCTTSCEECSSCCTT------------SCCCHHHHGGGCCSSCCHHHHHHHTCEEEEECGGGTTCBCTTSCBCBTTB
T ss_pred             HCCCCCCEEEECCCCCCC------------CCCCHHHHHHHCCCCCCHHHHHHCCCEEEEECHHHHCCCCCCCCCHHHCC
T ss_conf             648998126874657865------------67878999865069986999987699999965554344654532000002


Q ss_pred             -----CCCCCCC--C--CCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             -----3788851--1--012027964899943458999407999999998524518999999822789999999833223
Q 002649          477 -----RQIKDTT--L--YGSRTVFFLNPDGTLRPLAIELTRPPMDGKPQWKQVFTPSTGNSTESWLWRLAKAHVLAHDSG  547 (896)
Q Consensus       477 -----n~~~g~~--~--YA~~~Lffl~~dG~L~PIAIqL~~p~~~~~~~~~~VfTP~d~~~~~~~~W~LAK~~v~~aD~~  547 (896)
                           |.+++++  +  |||+||||++++|+|+||||||+|+|++.    ++||||+| +  ++|+|+|||+||++||++
T Consensus       308 ~~~~~n~~~~~~~~~y~~Ap~~Lf~l~~~g~L~PiAIqL~~~p~~~----~piftP~d-~--~~~~W~lAK~~v~~~D~~  380 (696)
T 3fg1_A          308 YKVPDHLKHDEADIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPE----NPIWTPHE-E--NEHDWMMAKFWLGVAESN  380 (696)
T ss_dssp             CC--------CCCCCBCCCCEEEEEECTTSCEEEEEEESSSSCBTT----BCEECTTC-S--SHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCC----CCEECCCC-C--CCCHHHHHHHHHHHHHHH
T ss_conf             2344564577655512116679999868997403899974699898----97478899-9--854799999999866889


Q ss_pred             HHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHCCCCHHHHCCCHHHHHHCCCCCCCCCCCCCCCC-HHHHHHHHHHH
Q ss_conf             56888865210221146899770446876832230231002000032989760347896222355781-57999999997
Q 002649          548 YHQLISHWLRTHCCVEPYVIATNRRLSAMHPINRLLKPHFRYTMEINALARKVLINADGIFETNFFPG-KYCMEFSSVIY  626 (896)
Q Consensus       548 ~HqlvsHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~~gGiie~~f~~G-~~~~elss~~Y  626 (896)
                      +||+++||++||+++|||+|||+||||.+|||||||.||||+||+||++||+.|||+||++|+++++| +++++|++++|
T Consensus       381 ~Hql~~Hll~THlv~E~f~iAt~R~L~~~HPi~kLL~PH~r~tl~IN~~Ar~~Li~~gG~i~~~~~~g~~~~~~l~~~~~  460 (696)
T 3fg1_A          381 FHQLNTHLLRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELIGSGGIVDQSLSLGGGGHVTFMEKCF  460 (696)
T ss_dssp             HHHHCCCCCTTHHHHHHHHHHHHHHSCTTSHHHHHHHHHHTTHHHHHHHHHHHTTSTTSHHHHHCTTTTTHHHHHHHHHH
T ss_pred             HHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHH
T ss_conf             98888876031567899999985128876745665036765253015798952028887102450467305999999998


Q ss_pred             HCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             11677888898547886299878999987654476789762112899999999998754302465546568688999999
Q 002649          627 DKHWRFDNEGLPKDLIRRGIAVEDPKAPHGLKLNIEDYPYANDGLDLWDALKQWVTNYVNHYYPDPSLVESDEELQAWWT  706 (896)
Q Consensus       627 ~~~w~F~~~~lP~DL~~RG~a~~D~~~~hgl~l~l~dYpYadDGL~IW~AI~~~V~~yv~~YY~~D~~V~~D~ELQaW~~  706 (896)
                      ++ |+|++++||+||++|||+.+  +       .|||||||+|||+||+||++||++||++||++|++|++|.|||+||+
T Consensus       461 ~~-~~f~~~~lP~dL~~RG~~~~--~-------~lp~YpY~~Dgl~iW~aI~~~V~~~v~~yY~~D~~V~~D~ELQaW~~  530 (696)
T 3fg1_A          461 KE-VNLQDYHLPNALKKRGVDDP--S-------KLPGFYYRDDGLALWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIY  530 (696)
T ss_dssp             TT-CCGGGGCHHHHHHHTTCCCT--T-------TSCCCHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHCHHHHHHHH
T ss_pred             HC-CEECCCCCCCHHHHCCCCCC--C-------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
T ss_conf             34-64056778413665599872--2-------37898158879999999999999988863799721047699999999


Q ss_pred             HHHHCCC---CCCCCCCCCC-CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             9982056---7778999999-98995679998845200133321111345520021269962213889999998916888
Q 002649          707 EIRTVGH---AEKKDEPWWP-VLKTPQDLIEIITTIAWVASGHHAAVNFGQYLYGGYFPNRPTVARTNLPNEDQTKEEWK  782 (896)
Q Consensus       707 Ei~~~Gh---~d~kd~p~~P-~l~T~~~Lv~~lT~iIf~aSa~HAAVNfgQy~y~gf~PN~P~~~r~p~P~~kkg~~e~~  782 (896)
                      ||+++||   +|.++. ||| +|+|+++||++||+|||+||+||||||||||+|+||+||+|++||+|||++| |..   
T Consensus       531 Ei~~~G~~~~~~~~~~-g~P~~l~T~~~Li~~lT~iIf~aSaqHAAVNfgQ~~~~g~~PN~P~~~r~p~P~~k-g~~---  605 (696)
T 3fg1_A          531 DVHKNGWRVNPGHQDH-GVPASFESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPPKKK-GEA---  605 (696)
T ss_dssp             HHHHHTSCCCTTCCCC-CCCSSCCCHHHHHHHHHHHHHHHTHHHHHHHTTHHHHHSSGGGSCSCBCSCCCSSS-SCC---
T ss_pred             HHHHCCCCCCCCCCCC-CCCCCCCCHHHHHHHHHEEHHHCCHHHHHCCCCCCCCEEECCCCCHHHCCCCCCCC-CCC---
T ss_conf             9972677645677654-57655788999998875403011402331045755302035788454368999998-988---


Q ss_pred             HHHHCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             63103299998219996899999999997317899975446778999999378999999999999999999976228821
Q 002649          783 SFLEKPEAALLRCFPAQFQALTVMLVIDLLSTHSPDEEYLGKEMEPAWGDDPVIKAAFEEFNLKMQELERIIDDRNSNEN  862 (896)
Q Consensus       783 ~~~~~pe~~~L~~lP~~~qa~~~m~~~~~LS~hs~de~yLG~~~~~~~~~d~~~~~a~~~F~~~L~~Ie~~I~~RN~~~~  862 (896)
                           +++++|++||++.||+.+|+++++||+|++||+|||+|++++|+ |+++++|+++|+++|++||++|++||+++ 
T Consensus       606 -----~~~~~l~~LP~~~~a~~~~~~~~~LS~~~~de~~LG~y~~~~~~-~~~~~~a~~~F~~~L~~ie~~I~~RN~~~-  678 (696)
T 3fg1_A          606 -----TLQSILSTLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAWE-DKDALDAINRFQDKLEDISKKIKQRNENL-  678 (696)
T ss_dssp             -----CHHHHHHHSCCHHHHHHHHHHHHHHTCCCTTCCBTTCCTTCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred             -----CHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHCCC-
T ss_conf             -----87789876898367589999999854788886330357850337-88999999999999999999999982899-


Q ss_pred             CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             0025788657720004799999976887753249
Q 002649          863 LKNRTGAAIVPYELLKPFSEPGATGKGVPYSISI  896 (896)
Q Consensus       863 lknR~g~~~~PY~~L~Pss~~g~t~~gIPnSIsI  896 (896)
                              ++||+||+|+        +|||||||
T Consensus       679 --------~~PY~~L~P~--------~IpnSIsI  696 (696)
T 3fg1_A          679 --------EVPYIYLLPE--------RIPNGTAI  696 (696)
T ss_dssp             --------SSCCCTTCGG--------GSBSSCCC
T ss_pred             --------CCCCCCCCCC--------CCCCEEEC
T ss_conf             --------9884017988--------88762059


No 8  
>3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa}
Probab=1.00  E-value=1  Score=1314.44  Aligned_cols=637  Identities=26%  Similarity=0.475  Sum_probs=558.7

Q ss_pred             CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEECC---CCCEEEEEEEEECCC
Q ss_conf             37999985101799888443103454457877999722699998357998961699999679---997257289980048
Q 002649           93 TLVLELVSAELDPETGKEKPTIKSRAHRSLFTDDDGNLKYKTEFDVPSNFGEVGAILVEADQ---LTETFLKDIALDGLR  169 (896)
Q Consensus        93 ~v~l~lvS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~~---~~e~fl~~i~l~~~p  169 (896)
                      .|.+.|+.+.-+ .+  +...|..+.+  ...+.+...+|.++  + .++|++-.|.|+.+.   ...|||+.|+|.+..
T Consensus        39 ~V~I~L~G~~G~-~S--~~~~L~~~~~--~~FeRGs~D~F~v~--~-~~LG~L~~IrI~hDnsG~~~~Wfl~~V~V~~~~  110 (698)
T 3vf1_A           39 SVSIKLTGKDGA-ET--SAFSLDKYFH--NDFESGGTDTYDQS--G-VDVGEIAMITLKENGFGLKSDWYIAKVIIEKID  110 (698)
T ss_dssp             CEEEEEEETTSC-BC--CCEEECCBCS--SSSCCCCEEEEEEE--E-CCCSSEEEEEEEECCCSSBCCCEEEEEEEEEEC
T ss_pred             EEEEEEEECCCC-EE--CCEEECCCCC--CCCCCCCEEEEEEE--E-CCCCCCEEEEEEECCCCCCCCEEEEEEEEECCC
T ss_conf             428999978997-01--3668178887--75245872079998--2-256784479999899879997598699997388


Q ss_pred             C----C-CEEEECCCCCCCCCCCCCCEEEEEC-CCCCCCCC-C-HHHHHHHHHHHHHHHCCCCCCCCCCCEEEECC---C
Q ss_conf             9----8-3897317764589779764288307-30156899-7-57689999999964089987643457154143---4
Q 002649          170 N----G-PVNIACDSWIQPKIVDKQKRIFFTN-KSYLPSQT-P-NGLARLRAEELNNLQGDGQGERKIHERIYDYD---V  238 (896)
Q Consensus       170 ~----g-~~~F~c~sWv~~~~~~~~~riff~n-~~yLp~~t-p-~~l~~~R~~EL~~lrg~g~g~r~~~driYdy~---~  238 (896)
                      .    | .++||||+|+...       +.++. +|.||+++ . +.|+++|++||+++|           +.|+|+   .
T Consensus       111 t~~~~g~~~~Fpc~rWL~~d-------~~l~~G~a~l~~~d~~~~~~~~~R~~El~~r~-----------~~y~w~~~~~  172 (698)
T 3vf1_A          111 EATGFSNKYIFPCYRWVIKQ-------LVVYEGKAILPNSKDNVKTIAEQRTKEVSENK-----------KLYKWGTDPR  172 (698)
T ss_dssp             TTTCCEEEEEEEEEEECSSE-------EEEECSSCCCTTSSSCCHHHHHHHHHHHHHHH-----------HHSCBCCCGG
T ss_pred             CCCCCCCEEEEEHHHCCCCC-------CEECCCCEECCCCCCCCHHHHHHHHHHHHHHH-----------HHCCCCCCCC
T ss_conf             77778957997720304688-------18667740335135566689999999999877-----------6203799886


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHCHHHH-HHHHH
Q ss_conf             45799998667878755567899899998667899999999998775587855988777700001100001688-77434
Q 002649          239 YNDLGMPDSILKSDLVRPVLGGKEHPYPRRCRTGHPKSSKDPASESWSLSVYVPRDEAFSLLKTAQFSATGVYS-ALHAV  317 (896)
Q Consensus       239 yndlG~Pd~~~~~~~~rpvlgg~~~pyPrr~rtgr~~~~~d~~~e~~~~~~yvPrDE~F~~~K~~~F~~~~~k~-~~~~~  317 (896)
                      |.+ |.|.+         +.+..                          ...||+|+||++.|..+| ....++ +++..
T Consensus       173 ~~~-G~p~~---------~~~~~--------------------------~~~Lp~~~~f~~~k~~~~-~~~~~~~~~~~~  215 (698)
T 3vf1_A          173 YVQ-DLPGF---------VDAEE--------------------------PKSLPKDVQFTDEATSSL-FRVGLADFANLG  215 (698)
T ss_dssp             GSS-SSCCC---------BCCSS--------------------------GGGSCGGGSCSSGGGGGS-SCCSHHHHHHTT
T ss_pred             CCC-CCCCE---------ECCCC--------------------------CCCCCHHHCCCCCCCCHH-HHHHHHHHHHHH
T ss_conf             589-98762---------05677--------------------------001883232012233326-554357877644


Q ss_pred             HHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCH
Q ss_conf             56688886048899999988999872169889975446631001001223221246764223357100111422552508
Q 002649          318 IPFVESILRIGKDKGFPSLEAIDKLFNEGVELPPEIEKLPSWLKILPNFFKSIANTGKDILRFETPETLKRDKLFWLRDE  397 (896)
Q Consensus       318 ~p~l~~~~~~~~~~~f~~f~di~~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~fp~P~~~~~~~~~W~~De  397 (896)
                      +   +++++  ...+|++|+|++++|.... .+               +.+++.                   .+|++|+
T Consensus       216 ~---~~~~~--~~~~w~~l~d~~~~f~~~~-~~---------------~~~~v~-------------------~~W~~D~  255 (698)
T 3vf1_A          216 L---SHLFG--IWDDWDCLEDFRQLITPAI-KS---------------GLPHAA-------------------EYWRDDV  255 (698)
T ss_dssp             C---GGGTT--CCCCCSSGGGGGGGCCTTS-TT---------------CSCTHH-------------------HHTTCHH
T ss_pred             H---HHHHH--HCCCCCCHHHHHHHHCCCC-CC---------------CCHHHH-------------------HHCCCHH
T ss_conf             2---10332--0568678999999845788-87---------------654455-------------------5255879


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHCCCEEEEECCCCCCCCHHCCC
Q ss_conf             99977740899521002457998999998887998762329999975089763999985695889605521361000013
Q 002649          398 EFGRETLAGLNPYGISLVADWPLKSTLDPETYGPTESAITKELIEKEIGGSMTVEEAIKQKKLFIIDYHDALLPYVEKVR  477 (896)
Q Consensus       398 eFarQ~LaG~NP~~Irr~~e~P~~s~Ldp~~yg~~~s~It~e~i~~~l~g~~tl~~al~~grLFi~Dy~d~~lp~l~~in  477 (896)
                      |||||+|||+||++||||+++|++            |+||++|++..|++++||++||++|||||+|||+  |+++ ++|
T Consensus       256 ~F~~Q~L~G~NP~~I~r~~~~P~~------------~~vt~~~v~~~l~~g~tl~~al~~grLfi~Dy~~--l~~~-~~~  320 (698)
T 3vf1_A          256 WFGSQFLNGSNPEVIRRCDKLPEN------------FPVKNEMVEKLLDRGYTLEKAMKEGLIFITDYKI--LEGI-PTM  320 (698)
T ss_dssp             HHHHHHHHSSCCSSCEECSSCCTT------------CCCCHHHHGGGSCTTCCHHHHHHTTCEEEEECGG--GTTC-CCC
T ss_pred             HHHHHHHCCCCCCEEEECCCCCCC------------CCCCHHHHHHHCCCCCCHHHHHHCCCEEEEECHH--HCCC-CCC
T ss_conf             999998648998427885668865------------5676899986506898799998759989996345--3477-565


Q ss_pred             CCCCCCCC--CCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEEEC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             78885110--12027964899943458999407999999998524518-9999998227899999998332235688886
Q 002649          478 QIKDTTLY--GSRTVFFLNPDGTLRPLAIELTRPPMDGKPQWKQVFTP-STGNSTESWLWRLAKAHVLAHDSGYHQLISH  554 (896)
Q Consensus       478 ~~~g~~~Y--A~~~Lffl~~dG~L~PIAIqL~~p~~~~~~~~~~VfTP-~d~~~~~~~~W~LAK~~v~~aD~~~HqlvsH  554 (896)
                      .++++++|  ||+||||++++|+|+||||||+|+|++.    ++|||| +|    ++|+|+|||+||++||+++||+++|
T Consensus       321 ~~~~~~~y~~Ap~~Lf~l~~~g~L~PiAIqL~~~p~~~----~~iftP~~d----~~~~W~lAK~~v~~~D~~~Hql~~H  392 (698)
T 3vf1_A          321 DTPEDKRYITTPLGLFYLKNNDDIIPIAIQLYQQPGEN----NSIWTPLKD----TEWDWIMAKLWLRCADTQYHQMITH  392 (698)
T ss_dssp             EETTEECBCCCCEEEEEECTTSCEEEEEEESSSSCBTT----BCEECTTTS----CHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred             CCCCCCCEECCCEEEEEECCCCCEEEEEEEEECCCCCC----CCEECCCCC----CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             44887325116458999878997403899974699888----973647989----8567999999997568888888888


Q ss_pred             HHHCCCCHHHHHHHHHCCCCCCCCHHHHCCCCHHHHCCCHHHHHHCCCCCCCCCCCCCCCC-HHHHHHHHHHHHCCCCCC
Q ss_conf             5210221146899770446876832230231002000032989760347896222355781-579999999971167788
Q 002649          555 WLRTHCCVEPYVIATNRRLSAMHPINRLLKPHFRYTMEINALARKVLINADGIFETNFFPG-KYCMEFSSVIYDKHWRFD  633 (896)
Q Consensus       555 llrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~~gGiie~~f~~G-~~~~elss~~Y~~~w~F~  633 (896)
                      |++||+++|||+|||+||||.+|||||||.||||+||+||++||+.|||+||++|+++++| +++++|++++|++ |+|+
T Consensus       393 ll~TH~v~E~~~iAt~R~L~~~HPi~kLL~PH~r~tl~IN~~ar~~Li~~~G~i~~~~~~g~~~~~~l~~~~~~~-~~f~  471 (698)
T 3vf1_A          393 LLRCHLMMEPTAVSSWRNLPSVHPVWKLLYPHTKGIMAINTLGRNDLIPTGGAADKVLSIGGGGQVTLMQKHYRS-VTFD  471 (698)
T ss_dssp             CCTTHHHHHHHHHHHHHHCCTTSHHHHHHHHHHTTHHHHHHHHHHHTSSTTSHHHHHCTTTTTHHHHHHHHHHTT-CCGG
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHC-CCCC
T ss_conf             741367789999998424997674566411566403201489896210888701454036720599999999843-5425


Q ss_pred             CCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
Q ss_conf             88985478862998789999876544767897621128999999999987543024655465686889999999982056
Q 002649          634 NEGLPKDLIRRGIAVEDPKAPHGLKLNIEDYPYANDGLDLWDALKQWVTNYVNHYYPDPSLVESDEELQAWWTEIRTVGH  713 (896)
Q Consensus       634 ~~~lP~DL~~RG~a~~D~~~~hgl~l~l~dYpYadDGL~IW~AI~~~V~~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~Gh  713 (896)
                      +++||+||++|||+            .|||||||+|||+||+||++||++||++||++|++|++|.|||+||+||+++||
T Consensus       472 ~~~lP~dL~~RG~~------------~l~~YpY~~Dgl~iW~aI~~~V~~~v~~yY~~D~~V~~D~ELQaW~~Ei~~~G~  539 (698)
T 3vf1_A          472 SYDLVKDLRQRGVD------------GLRKFYYKDDALLLWNVIHQFVQDIIQIYYNDDDSVKKDNEIQDWIRDLHENGY  539 (698)
T ss_dssp             GGCHHHHHHHTTCT------------TCTTCHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHTCHHHHHHHHHHHHTTS
T ss_pred             CCCCHHHHHHCCCC------------CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCC
T ss_conf             67786889876997------------678983077699999999999999887538993010365999999999974467


Q ss_pred             ---CCCCCCCCCC-CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCHH
Q ss_conf             ---7778999999-989956799988452001333211113455200212699622138899999989168886310329
Q 002649          714 ---AEKKDEPWWP-VLKTPQDLIEIITTIAWVASGHHAAVNFGQYLYGGYFPNRPTVARTNLPNEDQTKEEWKSFLEKPE  789 (896)
Q Consensus       714 ---~d~kd~p~~P-~l~T~~~Lv~~lT~iIf~aSa~HAAVNfgQy~y~gf~PN~P~~~r~p~P~~kkg~~e~~~~~~~pe  789 (896)
                         +|+++. ||| +|+|+++||++||+|||+||+||||||||||+|+||+||+|++||+|||++| |..        ++
T Consensus       540 ~~~~~~~~~-g~P~~l~t~~~Lv~~lT~iIf~aS~qHAAVNfgQ~~~~g~~PN~P~~~r~p~P~~k-g~~--------~~  609 (698)
T 3vf1_A          540 PAGSDGTDK-KVPKSFENREELVHFLTVVVFTCSCQHAAVNFSQMATYGFHPNSPTLMRQPPPTEK-GKS--------NH  609 (698)
T ss_dssp             CCCTTCCCC-CCCSSCCSHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHSSGGGSCSCBSSCCCSST-TCC--------CH
T ss_pred             CCCCCCCCC-CCCCCCCCHHHHHHHHHEEHHHCCCHHHHCCCCCCCCEEECCCCCHHHCCCCCCCC-CCC--------CH
T ss_conf             655677654-57655788999998875403011402331045755302035788454368999998-988--------87


Q ss_pred             HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             99982199968999999999973178999754467789999993789999999999999999999762288210025788
Q 002649          790 AALLRCFPAQFQALTVMLVIDLLSTHSPDEEYLGKEMEPAWGDDPVIKAAFEEFNLKMQELERIIDDRNSNENLKNRTGA  869 (896)
Q Consensus       790 ~~~L~~lP~~~qa~~~m~~~~~LS~hs~de~yLG~~~~~~~~~d~~~~~a~~~F~~~L~~Ie~~I~~RN~~~~lknR~g~  869 (896)
                      +++|++||++.||+.+|+++++||+|++||+|||+|++++|+ |+++++|+++|+++|++||++|++||+++        
T Consensus       610 ~~~l~~LP~~~~a~~~~~~~~~LS~~~~de~~LG~y~~~~~~-~~~~~~a~~~F~~~L~~ie~~I~~RN~~~--------  680 (698)
T 3vf1_A          610 KVIMASLANKHQAVTMVSVVNALTTIYPTEKFLGDYADNLFG-DAAAHAAMAKFKSNLANITKQITERNQGM--------  680 (698)
T ss_dssp             HHHHHHSCCHHHHHHHHHHHHHHTCCCTTCCBTTCCTTCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHTTTC--------
T ss_pred             HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHCCC--------
T ss_conf             789776878899999999999854788887430357840237-88999999999999999999999972899--------


Q ss_pred             CCCCCEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             657720004799999976887753249
Q 002649          870 AIVPYELLKPFSEPGATGKGVPYSISI  896 (896)
Q Consensus       870 ~~~PY~~L~Pss~~g~t~~gIPnSIsI  896 (896)
                       ++||+||+|+        +|||||||
T Consensus       681 -~~PY~~L~P~--------~IpnSIsI  698 (698)
T 3vf1_A          681 -VSPYTWLIPG--------HVPNSIAI  698 (698)
T ss_dssp             -SSCCCTTCGG--------GSBSSCCC
T ss_pred             -CCCCCCCCCC--------CCCCEEEC
T ss_conf             -9884027988--------89773059


No 9  
>3rde_A Arachidonate 12-lipoxygenase, 12S-type; C-terminal domain, protein-inhibitor complex, oxapentadeca-4-YNE)phenylpropanoic acid; HET: OYP; 1.89A {Sus scrofa}
Probab=1.00  E-value=1  Score=1261.02  Aligned_cols=552  Identities=28%  Similarity=0.434  Sum_probs=502.1

Q ss_pred             EEEEECCCCCCCCCC-HHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             288307301568997-5768999999996408998764345715414344579999866787875556789989999866
Q 002649          191 RIFFTNKSYLPSQTP-NGLARLRAEELNNLQGDGQGERKIHERIYDYDVYNDLGMPDSILKSDLVRPVLGGKEHPYPRRC  269 (896)
Q Consensus       191 riff~n~~yLp~~tp-~~l~~~R~~EL~~lrg~g~g~r~~~driYdy~~yndlG~Pd~~~~~~~~rpvlgg~~~pyPrr~  269 (896)
                      .++..++|+||.++. +.|+++|++||+++|           +.|+|+.|.+ |.|.+         +.+.+        
T Consensus        17 ~~l~~g~a~~~~~d~~~~~~~~R~~El~~r~-----------~~y~w~~~~~-G~p~~---------i~~~~--------   67 (573)
T 3rde_A           17 RGSHMGTARTVVDDPQGLFKKHREEELAERR-----------KLYRWGNWKD-GLILN---------IASTG--------   67 (573)
T ss_dssp             -----CCCCCSTTCTTCTTHHHHHHHHHHHH-----------HHSCEECSST-TSCCE---------ECCSS--------
T ss_pred             EEECCCEEEEECCCCCHHHHHHHHHHHHHHH-----------HEECCCCCCC-CCCCC---------CCCCC--------
T ss_conf             9966862574066777899999999999855-----------1242899899-99740---------06787--------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCC
Q ss_conf             78999999999987755878559887777000011000016887743456688886048899999988999872169889
Q 002649          270 RTGHPKSSKDPASESWSLSVYVPRDEAFSLLKTAQFSATGVYSALHAVIPFVESILRIGKDKGFPSLEAIDKLFNEGVEL  349 (896)
Q Consensus       270 rtgr~~~~~d~~~e~~~~~~yvPrDE~F~~~K~~~F~~~~~k~~~~~~~p~l~~~~~~~~~~~f~~f~di~~ly~~~~~~  349 (896)
                                        ..+|||||||++.|..+|..+.++++++..+   +++++  ...+|++|+|++++|+.+   
T Consensus        68 ------------------~~~LP~d~~f~~~K~~~f~~~~~~~~~~~~l---~~~~~--~~~~w~sl~D~~~lf~~~---  121 (573)
T 3rde_A           68 ------------------IHDLPVDERFLEDKRIDFEASLAKGLADLAV---KDSLN--VLMSWNSLDSFNRIFWSG---  121 (573)
T ss_dssp             ------------------GGGSCGGGSCCHHHHHHHHHHHHHHHHHHHH---HHHHH--TTSCCCSGGGGGGGCCSC---
T ss_pred             ------------------CCCCCHHHCCCCCCCCHHHHHHHHHHHHHHH---HHHHH--HCCCCCCHHHHHHHHCCC---
T ss_conf             ------------------0008831201542332177777888887423---45665--147989899999984579---


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             97544663100100122322124676422335710011142255250899977740899521002457998999998887
Q 002649          350 PPEIEKLPSWLKILPNFFKSIANTGKDILRFETPETLKRDKLFWLRDEEFGRETLAGLNPYGISLVADWPLKSTLDPETY  429 (896)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~fp~P~~~~~~~~~W~~DeeFarQ~LaG~NP~~Irr~~e~P~~s~Ldp~~y  429 (896)
                        ..           .+.+++.                   .+|++|++||||+|||+||++||||+++|++        
T Consensus       122 --~~-----------~~~e~v~-------------------~~W~~D~~Fg~Q~L~G~NP~~I~r~~~~P~~--------  161 (573)
T 3rde_A          122 --QS-----------KLAERVR-------------------DSWKEDALFGYQFLNGTNPMLLRHSVELPAR--------  161 (573)
T ss_dssp             --CC-----------HHHHHHH-------------------HHTTCHHHHHHHHHHSSCTTSCEECSSCCTT--------
T ss_pred             --CC-----------CCCCCHH-------------------HHCCCHHHHHHHHHCCCCCHHEEECCCCCCC--------
T ss_conf             --98-----------8650123-------------------3232749999998648997223666768744--------


Q ss_pred             CCCCCCCCHHHHHHHHCCCCCHHHHHHCCCEEEEECCCCCCCCHHCCCCCCCCCCC--CCCEEEEECCCCCEEEEEEEEC
Q ss_conf             99876232999997508976399998569588960552136100001378885110--1202796489994345899940
Q 002649          430 GPTESAITKELIEKEIGGSMTVEEAIKQKKLFIIDYHDALLPYVEKVRQIKDTTLY--GSRTVFFLNPDGTLRPLAIELT  507 (896)
Q Consensus       430 g~~~s~It~e~i~~~l~g~~tl~~al~~grLFi~Dy~d~~lp~l~~in~~~g~~~Y--A~~~Lffl~~dG~L~PIAIqL~  507 (896)
                          |+||++|++.   | +||++|+++|||||+|||  +|+++ ++|.++++++|  ||+||||++++|+|+||||||+
T Consensus       162 ----~~vt~~~v~~---g-~tl~~al~~grLfi~Dy~--~l~~i-~~n~~~~~~~y~~Ap~~Lf~l~~~g~L~PlAIqL~  230 (573)
T 3rde_A          162 ----LKFPPGMEEL---Q-AQLEKELQGGTLFEADFS--LLDGI-KANVILSSQQYLAVPLVMLKLQPDGKLLPMVIQLQ  230 (573)
T ss_dssp             ----CCCCTTCHHH---H-HHHHHHHHHTCEEEEECG--GGTTC-CCCEETTEECCCCCCEEEEEECTTSCEEEEEEECS
T ss_pred             ----CCCCHHHHHC---C-CCHHHHHHCCCEEEEEHH--HHCCC-CCCCCCCCCCEEECCEEEEEECCCCCEEEEEEEEE
T ss_conf             ----5685999861---6-609999972998998425--53446-55656887315215568999878997625899974


Q ss_pred             CCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHCCCCH
Q ss_conf             79999999985245189999998227899999998332235688886521022114689977044687683223023100
Q 002649          508 RPPMDGKPQWKQVFTPSTGNSTESWLWRLAKAHVLAHDSGYHQLISHWLRTHCCVEPYVIATNRRLSAMHPINRLLKPHF  587 (896)
Q Consensus       508 ~p~~~~~~~~~~VfTP~d~~~~~~~~W~LAK~~v~~aD~~~HqlvsHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHf  587 (896)
                      +|+.++  ..++||||+|    ++|+|+|||+||++||+++||+++||++||+++|||+|||+||||.+|||||||.|||
T Consensus       231 ~p~~~~--~~~~iftP~d----~~~~W~lAK~~v~~aD~~~HqlvsHll~THlv~E~f~iAt~R~Ls~~HPI~kLL~PH~  304 (573)
T 3rde_A          231 LPREGS--PLPPLFLPTD----PPMVWLLAKCWVRSSDFQLHELHSHLLRGHLMAEVIAVATMRCLPSIHPIFKLLIPHF  304 (573)
T ss_dssp             CCCTTS--CCCCEECTTS----CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCTTSHHHHHHGGGG
T ss_pred             CCCCCC--CCCCEECCCC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHH
T ss_conf             589988--8898477899----9517999999986118999999998732578889999998423998675255320566


Q ss_pred             HHHCCCHHHHHHCCCCCCCCCCCCCCCC-HHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             2000032989760347896222355781-579999999971167788889854788629987899998765447678976
Q 002649          588 RYTMEINALARKVLINADGIFETNFFPG-KYCMEFSSVIYDKHWRFDNEGLPKDLIRRGIAVEDPKAPHGLKLNIEDYPY  666 (896)
Q Consensus       588 r~Tl~IN~lAR~~LI~~gGiie~~f~~G-~~~~elss~~Y~~~w~F~~~~lP~DL~~RG~a~~D~~~~hgl~l~l~dYpY  666 (896)
                      |+||+||++||+.|||+||++|+++++| +++++|++++|++ |+|++++||+||++|||+            .||||||
T Consensus       305 r~Tl~IN~~AR~~Li~~gGiid~~~~~g~~~~~~l~~~~~~~-~~f~~~~lP~dL~~RG~~------------~lp~YpY  371 (573)
T 3rde_A          305 RYTMEINVRARNGLVSDLGIFDQVVSTGGGGHVELLRRAAAL-LTYSSFCPPDDLADRGLL------------GVESSFY  371 (573)
T ss_dssp             TTHHHHHHHCCCCCSSTTSHHHHHCTTTTTHHHHHHHHHHHH-CCSGGGSHHHHHHHTTCT------------TCTTCHH
T ss_pred             HHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHC-CCCCCCCCCHHHHHCCCC------------CCCCCCH
T ss_conf             505442399997342898712455326702399999998702-511524670878866987------------6889825


Q ss_pred             CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHCCCCCC
Q ss_conf             211289999999999875430246554656868899999999820567778999999-9899567999884520013332
Q 002649          667 ANDGLDLWDALKQWVTNYVNHYYPDPSLVESDEELQAWWTEIRTVGHAEKKDEPWWP-VLKTPQDLIEIITTIAWVASGH  745 (896)
Q Consensus       667 adDGL~IW~AI~~~V~~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~Gh~d~kd~p~~P-~l~T~~~Lv~~lT~iIf~aSa~  745 (896)
                      |+|||+||+||++||++||++||++|++|++|.|||+||+||+++||+|+++. ||| +|+|+++||++||+|||+||+|
T Consensus       372 ~dDgL~iW~aI~~~V~~~v~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~~~~~~-g~P~~l~T~~~Li~~lT~iIf~aSaq  450 (573)
T 3rde_A          372 AQDALRLWEVISRYVEGIVSLHYKTDESVKEDFELQAWCREFTEIGLLGAQDR-GFPVSLQSKEQLCHFVTMCIFTCTGQ  450 (573)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCCSHHHHHTCHHHHHHHHCCCCCCTTSCGGG-TCCSCCCSHHHHHHHHHHHHHCCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHCCHH
T ss_conf             77699999999999999999857990341387889999999973446777555-67766788999998885215221303


Q ss_pred             CCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             11113455200212699622138899999989168886310329999821999689999999999731789997544677
Q 002649          746 HAAVNFGQYLYGGYFPNRPTVARTNLPNEDQTKEEWKSFLEKPEAALLRCFPAQFQALTVMLVIDLLSTHSPDEEYLGKE  825 (896)
Q Consensus       746 HAAVNfgQy~y~gf~PN~P~~~r~p~P~~kkg~~e~~~~~~~pe~~~L~~lP~~~qa~~~m~~~~~LS~hs~de~yLG~~  825 (896)
                      |||||||||+|+||+||+|++||+|||++| +         .+++++|++||++.||+.+|+++++||+|++||+|||+|
T Consensus       451 HAAVNfgQ~~y~g~vPN~P~~~r~p~P~~k-~---------~~~~~~l~~LP~~~~a~~~~~~~~~LS~~~~de~~LG~y  520 (573)
T 3rde_A          451 HSSNHLGQLDWYTWVPNAPCTMRLPPPTTK-D---------ATLETVMATLPNFHQASLQMSITWQLGRCQPTMVALGQH  520 (573)
T ss_dssp             HHHHHTTHHHHSSSGGGSCSCCSSCCCSSS-C---------CCHHHHHHHSCCHHHHHHHHHHHHHHHSCCTTCCBTTCC
T ss_pred             HHHHCCCCCCEEEECCCCHHHHCCCCCCCC-C---------CCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             443134755304056787276469999999-9---------879999987888688999999999954788887520358


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             89999993789999999999999999999762288210025788657720004799999976887753249
Q 002649          826 MEPAWGDDPVIKAAFEEFNLKMQELERIIDDRNSNENLKNRTGAAIVPYELLKPFSEPGATGKGVPYSISI  896 (896)
Q Consensus       826 ~~~~~~~d~~~~~a~~~F~~~L~~Ie~~I~~RN~~~~lknR~g~~~~PY~~L~Pss~~g~t~~gIPnSIsI  896 (896)
                      ++ .|+.|+++++|+++|+++|++||++|++||++.         ++||+||+|+        +|||||||
T Consensus       521 ~~-~~f~d~~~~~a~~~F~~~L~~ie~~I~~RN~~~---------~~PY~~L~P~--------~IpnSIsI  573 (573)
T 3rde_A          521 EE-EYFSGPGPKAVLTKFREELAALDKDIEVRNAKL---------ALPYEYLRPS--------RVENSVAI  573 (573)
T ss_dssp             CC-CCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHTS---------SSCCCTTCTT--------TSBSSCCC
T ss_pred             CC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC---------CCCCCCCCCC--------CCCCCCCC
T ss_conf             73-202788999999999999999999999981899---------9885007988--------98770249


No 10 
>3d3l_A Arachidonate 12-lipoxygenase, 12S-type; ALOX12, iron-binding protein, 12-LOX, platelet-type lipoxygenase 12, structural genomics; 2.60A {Homo sapiens}
Probab=1.00  E-value=1  Score=1153.29  Aligned_cols=494  Identities=28%  Similarity=0.438  Sum_probs=450.8

Q ss_pred             CHHHHCCHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC
Q ss_conf             70000110000168877434566888860488999999889998721698899754466310010012232212467642
Q 002649          298 SLLKTAQFSATGVYSALHAVIPFVESILRIGKDKGFPSLEAIDKLFNEGVELPPEIEKLPSWLKILPNFFKSIANTGKDI  377 (896)
Q Consensus       298 ~~~K~~~F~~~~~k~~~~~~~p~l~~~~~~~~~~~f~~f~di~~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  377 (896)
                      ++.|..+|..+..+++....+   +++++  ...+|++|+|++++|... ..+               +.+++       
T Consensus        13 ~~~k~~~~~~~~~~~~~~~~~---~~~~~--~~~~w~~l~D~~~~f~~~-~~~---------------~~~~v-------   64 (541)
T 3d3l_A           13 LGTENLDFEWTLKAGALEMAL---KRVYT--LLSSWNCLEDFDQIFWGQ-KSA---------------LAEKV-------   64 (541)
T ss_dssp             ---------CCSSTTHHHHHH---HHHHH--HHHTTSSSTTHHHHHTSC-CCH---------------HHHHH-------
T ss_pred             CCCCCCEEEECHHHHHHHHHH---HHHHH--CCCCCCCHHHHHHHHCCC-CCC---------------CCHHH-------
T ss_conf             555640234004677788789---98864--158866699999984367-777---------------74345-------


Q ss_pred             CCCCCCHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHC
Q ss_conf             23357100111422552508999777408995210024579989999988879987623299999750897639999856
Q 002649          378 LRFETPETLKRDKLFWLRDEEFGRETLAGLNPYGISLVADWPLKSTLDPETYGPTESAITKELIEKEIGGSMTVEEAIKQ  457 (896)
Q Consensus       378 l~fp~P~~~~~~~~~W~~DeeFarQ~LaG~NP~~Irr~~e~P~~s~Ldp~~yg~~~s~It~e~i~~~l~g~~tl~~al~~  457 (896)
                              +    ++|++|++||||+|||+||++|+||+++|++            |+||++|++   ++ +||++|+++
T Consensus        65 --------~----~~W~~De~Fa~Q~L~G~NP~~I~r~~~~P~~------------~~vt~~~v~---~~-~tl~~al~~  116 (541)
T 3d3l_A           65 --------R----QCWQDDELFSYQFLNGANPMLLRRSTSLPSR------------LVLPSGMEE---LR-AQLEKELQN  116 (541)
T ss_dssp             --------H----HHTTSHHHHHHHHHHSSCCSSCEECSSCCTT------------CCCCSSCHH---HH-HHHHHHHHT
T ss_pred             --------H----HHHCCCHHHHHHHHCCCCCCCCEECCCCCCC------------CCCCHHHHC---CC-CCHHHHHHC
T ss_conf             --------5----4311719999998648997412346778622------------579988966---86-669999764


Q ss_pred             CCEEEEECCCCCCCCHHCCCCCCCCCCC--CCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCHHHH
Q ss_conf             9588960552136100001378885110--12027964899943458999407999999998524518999999822789
Q 002649          458 KKLFIIDYHDALLPYVEKVRQIKDTTLY--GSRTVFFLNPDGTLRPLAIELTRPPMDGKPQWKQVFTPSTGNSTESWLWR  535 (896)
Q Consensus       458 grLFi~Dy~d~~lp~l~~in~~~g~~~Y--A~~~Lffl~~dG~L~PIAIqL~~p~~~~~~~~~~VfTP~d~~~~~~~~W~  535 (896)
                      |||||+|||+  |+++ ++|.++++++|  ||+||||++++|+|+||||||++| +++++ .++||||+|    ++|.|+
T Consensus       117 grLfi~Dy~~--l~~~-~~n~~~~~~~Y~~Ap~~lf~l~~~g~L~PlAIqL~~p-~~~~p-~~~VftP~D----~~~~W~  187 (541)
T 3d3l_A          117 GSLFEADFIL--LDGI-PANVIRGEKQYLAAPLVMLKMEPNGKLQPMVIQIQPP-NPSSP-TPTLFLPSD----PPLAWL  187 (541)
T ss_dssp             TCEEEEECGG--GTTC-CC-----CCCCCCCCEEEEEECTTSCEEEEEEESSCC-BTTBS-SCCCBCTTS----CHHHHH
T ss_pred             CCEEEECCHH--HCCC-CCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECC-CCCCC-CCEEECCCC----CCHHHH
T ss_conf             9978835255--4668-6665587754122556999998999886799996079-99898-750784899----940899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHCCCCHHHHCCCHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             99999983322356888865210221146899770446876832230231002000032989760347896222355781
Q 002649          536 LAKAHVLAHDSGYHQLISHWLRTHCCVEPYVIATNRRLSAMHPINRLLKPHFRYTMEINALARKVLINADGIFETNFFPG  615 (896)
Q Consensus       536 LAK~~v~~aD~~~HqlvsHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~~gGiie~~f~~G  615 (896)
                      |||+||++||+++||+++||++||+++|||+|||+||||.+|||||||.||||+||+||++||+.|||+||++|++|++|
T Consensus       188 lAK~~v~~aD~~~HqlisHll~THlv~Epf~iAt~RqLs~~HPI~kLL~PH~r~Tl~IN~~AR~~LI~~~Giid~~~~~g  267 (541)
T 3d3l_A          188 LAKSWVRNSDFQLHEIQYHLLNTHLVAEVIAVATMRCLPGLHPIFKFLIPHIRYTMEINTRARTQLISDGGIFDKAVSTG  267 (541)
T ss_dssp             HHHHHHHHHHHHHHHHCCCCCTTHHHHHHHHHHHHHHSCTTSHHHHHHGGGCCC--------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCC
T ss_conf             99999998888999999877566788889999864248865840455478998799888999975218887122320588


Q ss_pred             HHH-HHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             579-9999999711677888898547886299878999987654476789762112899999999998754302465546
Q 002649          616 KYC-MEFSSVIYDKHWRFDNEGLPKDLIRRGIAVEDPKAPHGLKLNIEDYPYANDGLDLWDALKQWVTNYVNHYYPDPSL  694 (896)
Q Consensus       616 ~~~-~elss~~Y~~~w~F~~~~lP~DL~~RG~a~~D~~~~hgl~l~l~dYpYadDGL~IW~AI~~~V~~yv~~YY~~D~~  694 (896)
                      .++ ++|++.+|++ |+|++++||+||++|||.            .|||||||+|||+||+||++||++||++||++|++
T Consensus       268 ~~~~~el~~~~y~~-~~f~~~~lP~dL~~RG~e------------~ip~YpY~dDgL~iW~aI~~~V~~yv~~yY~~D~~  334 (541)
T 3d3l_A          268 GGGHVQLLRRAAAQ-LTYCSLCPPDDLADRGLL------------GLPGALYAHDALRLWEIIARYVEGIVHLFYQRDDI  334 (541)
T ss_dssp             -CCSHHHHHHHHHT-CCTTTTCHHHHHHHTTCS------------SCTTCHHHHHHHHHHHHHHHHHHHHHHHHSCSHHH
T ss_pred             CCCHHHHHHHHHCC-CCCCCCCCCHHHHHCCCC------------CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             42289999999727-621424575666645755------------46688520008999999999999999873688432


Q ss_pred             CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC
Q ss_conf             56868899999999820567778999999989956799988452001333211113455200212699622138899999
Q 002649          695 VESDEELQAWWTEIRTVGHAEKKDEPWWPVLKTPQDLIEIITTIAWVASGHHAAVNFGQYLYGGYFPNRPTVARTNLPNE  774 (896)
Q Consensus       695 V~~D~ELQaW~~Ei~~~Gh~d~kd~p~~P~l~T~~~Lv~~lT~iIf~aSa~HAAVNfgQy~y~gf~PN~P~~~r~p~P~~  774 (896)
                      |++|.|||+||+||+++||+|+++.+||++|+|+++||++||+|||+||+||||||||||+|+||+||+|++||+|||++
T Consensus       335 V~~D~ELQaW~~Ei~~~G~~~~~~~g~p~~l~T~~~Li~~lT~iIf~aSaqHAAVNfgQy~y~g~vPN~P~~~r~p~P~~  414 (541)
T 3d3l_A          335 VKGDPELQAWCREITEVGLCQAQDRGFPVSFQSQSQLCHFLTMCVFTCTAQHAAINQGQLDWYAWVPNAPCTMRMPPPTT  414 (541)
T ss_dssp             HHHCHHHHHHHHHHHTTTTTSGGGTTCCSSCCSHHHHHHHHHHHHHHHTHHHHHHHTTHHHHHSSGGGSCSCCSSCCCSS
T ss_pred             CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCC
T ss_conf             23678999999999845677875679997667599999997756764002445332586631022667756656999977


Q ss_pred             CCCHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             98916888631032999982199968999999999973178999754467789999993789999999999999999999
Q 002649          775 DQTKEEWKSFLEKPEAALLRCFPAQFQALTVMLVIDLLSTHSPDEEYLGKEMEPAWGDDPVIKAAFEEFNLKMQELERII  854 (896)
Q Consensus       775 kkg~~e~~~~~~~pe~~~L~~lP~~~qa~~~m~~~~~LS~hs~de~yLG~~~~~~~~~d~~~~~a~~~F~~~L~~Ie~~I  854 (896)
                       ||..+        ++++|++||++.||+.+|+++++||+|++||+|||+|++ .|+.|+++++|+++|+++|++||++|
T Consensus       415 -kg~~~--------~~~~l~~LP~~~~a~~~~~~~~~LS~~~~de~~LG~y~~-~~f~d~~~~~a~~~F~~~L~~ie~~I  484 (541)
T 3d3l_A          415 -KEDVT--------MATVMGSLPDVRQACLQMAISWHLSRRQPDMVPLGHHKE-KYFSGPKPKAVLNQFRTDLEKLEKEI  484 (541)
T ss_dssp             -SSSCC--------HHHHHHHSCCHHHHHHHHHHHHHHC----CCCBTTCCCC-CSCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCCCC--------HHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             -78837--------999998787889999999999996368888761256774-11268489999999999999999999


Q ss_pred             HHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             762288210025788657720004799999976887753249
Q 002649          855 DDRNSNENLKNRTGAAIVPYELLKPFSEPGATGKGVPYSISI  896 (896)
Q Consensus       855 ~~RN~~~~lknR~g~~~~PY~~L~Pss~~g~t~~gIPnSIsI  896 (896)
                      ++||+++         .+||+||+|+        ||||||||
T Consensus       485 ~~RN~~~---------~~PY~~L~P~--------~IpnSIsI  509 (541)
T 3d3l_A          485 TARNEQL---------DWPYEYLKPS--------CIENSVTS  509 (541)
T ss_dssp             HHHHHTC---------SSCCCSCCGG--------GSBSSCC-
T ss_pred             HHHCCCC---------CCCCCEECCC--------CCCCEEEE
T ss_conf             9970899---------9997117988--------97757878


Done!