BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002652
(896 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P49025|CTRO_MOUSE Citron Rho-interacting kinase OS=Mus musculus GN=Cit PE=1 SV=3
Length = 2055
Score = 40.0 bits (92), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 136/270 (50%), Gaps = 38/270 (14%)
Query: 296 HQLKVLRDMLDAKQKELAEISRISAEQKHEMEDLNDRLSASMQSCTEANEIMKSQKVTID 355
H+L +D + E +++ +I+AEQ+ ++++L ++L ++++ TEA E++++ + +
Sbjct: 607 HKLMKAKDQGKPEVGEYSKLEKINAEQQLKIQELQEKLEKAVKASTEATELLQNIRQAKE 666
Query: 356 ELKTQLDEERNL---------RRVDRENAEADLKAAVQKSQLETQEKLK-RLSDAASRRE 405
+ +L++ N + V+ E L+ V++ LET E+ + RL D +
Sbjct: 667 RAERELEKLHNREDSSEGIKKKLVEAEERRHSLENKVKR--LETMERRENRLKDDIQTKS 724
Query: 406 LEQQEVINK-LQIAEKQSSLQVESLKLKLDETRERLVTSDNKVRLLETQVCKEQNVSASW 464
+ Q++ +K L++ EK QV + L++ +++ + K+++L+ Q+ K+
Sbjct: 725 EQIQQMADKILELEEKHREAQVSAQHLEV-HLKQKEQHYEEKIKVLDNQIKKDLADK--- 780
Query: 465 KKRVEELENEIKKLREE------LESEKQAAREVAWAKVSGLELDI--------LAATRD 510
E LEN +++ EE + SE++A +K+ LE I LAA
Sbjct: 781 ----ESLENMMQRHEEEAHEKGKILSEQKAMINAMDSKIRSLEQRIVELSEANKLAANSS 836
Query: 511 LDFERRRLKAARERIMLRETQLRAFYSTTE 540
L F +R +KA E M+ E + + FY T+
Sbjct: 837 L-FTQRNMKAQEE--MISELRQQKFYLETQ 863
>sp|A8IQE0|CCD39_CHLRE Coiled-coil domain-containing protein 39 OS=Chlamydomonas
reinhardtii GN=CCDC39 PE=1 SV=1
Length = 894
Score = 40.0 bits (92), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 92/191 (48%), Gaps = 22/191 (11%)
Query: 443 SDNKVRLLETQVCKEQNVSASWKKRVEELENEIKKLREELESEKQAAREVAWAKVSGLEL 502
+D +V E +V K+++V A + R EEL N+++ ++ L +AA E+A V +
Sbjct: 289 ADARVAYYEREVGKQRDVLAREQARTEELNNQVELVKATL---SKAATELAQRTVENKQ- 344
Query: 503 DILAATRDLDFERRRLKAARERIMLRETQLR-------AFYSTTEEISVLFARQQEQLKA 555
A DLD +R++L AAR+R ++ + +L + + E+ + ++ +LKA
Sbjct: 345 ----AREDLDAKRQKLDAARKRFVVLKRKLENEFGNLDSMEAKASELEAMRRGEEARLKA 400
Query: 556 MQK--TLEDEENYENTSVDIDLCVPDGENSRTIVGEKLPNGHHSNSAAKADSSGEASTTE 613
+ K L +E Y+ + V DL + E I G G + N AA+ + E
Sbjct: 401 ILKEHELLKKEQYKRSQVLFDLRQKERELISEISG---GQGQNKNLAARIHALDEQVVA- 456
Query: 614 KHDCDIRSQEE 624
+RS+EE
Sbjct: 457 -RAGGVRSEEE 466
>sp|Q0VF96|CGNL1_HUMAN Cingulin-like protein 1 OS=Homo sapiens GN=CGNL1 PE=1 SV=2
Length = 1302
Score = 38.9 bits (89), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 111/210 (52%), Gaps = 23/210 (10%)
Query: 309 QKELAEISRISAEQKHEMEDL-----NDR--LSASMQSC-TEANEIMKSQKVTIDELKTQ 360
QK+L+E + +EQK ++ L N+R L +++ E +I+++ + + EL+ Q
Sbjct: 915 QKQLSEKLKEESEQKEQLRRLKNEMENERWHLGKTIEKLQKEMADIVEASRTSTLELQNQ 974
Query: 361 LDE-----ERNLRRVDRENAEADLKAAVQKSQL---ETQEKLKRLSDAASRRELEQQEVI 412
LDE R L + R+ E L+A +KS+L + Q++++ + + + Q E +
Sbjct: 975 LDEYKEKNRRELAEMQRQLKEKTLEA--EKSRLTAMKMQDEMRLMEEELRDYQRAQDEAL 1032
Query: 413 NKLQIAE---KQSSLQVESLKLKLDETRERLVTS-DNKVRLLETQVCKEQNVSASWKKRV 468
K Q+ E K ++E+ K L + R RLV ++KV LE ++ +E+N S +R+
Sbjct: 1033 TKRQLLEQTLKDLEYELEA-KSHLKDDRSRLVKQMEDKVSQLEMELEEERNNSDLLSERI 1091
Query: 469 EELENEIKKLREELESEKQAAREVAWAKVS 498
++++LR EL E+ A +++ K+S
Sbjct: 1092 SRSREQMEQLRNELLQERAARQDLECDKIS 1121
>sp|Q08379|GOGA2_HUMAN Golgin subfamily A member 2 OS=Homo sapiens GN=GOLGA2 PE=1 SV=3
Length = 1002
Score = 36.6 bits (83), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 137/282 (48%), Gaps = 37/282 (13%)
Query: 236 DGPLSLDDFRSLQRSNTELRKQLESQV-------LEIDKLRNENRVVVERHEKEMKE--- 285
+GP S + + L+ +L L+S + I+KL+ +N+ + ++ E+E KE
Sbjct: 148 EGPASSANLKDLESRYQQLAVALDSSYVTNKQLNITIEKLKQQNQEITDQLEEEKKECHQ 207
Query: 286 ----MKESVSISYLHQLKVLRDMLDAKQKELAEISRISAEQKHEMEDLNDRLSASMQSCT 341
++E + + ++ + +L Q LA + +++ E EDL RL S +
Sbjct: 208 KQGALREQLQV-HIQTIGILVSEKAELQTALAHTQHAARQKEGESEDLASRLQYSRRRVG 266
Query: 342 E---ANEIMKSQKVTIDELKTQLDEERNLRRVD-RENAEADLKAAVQKSQLETQEKLKRL 397
E A + +Q+ D +L +ER+ R++ +N +++ +KS+LE EKL+ L
Sbjct: 267 ELERALSAVSTQQKKADRYNKELTKERDALRLELYKNTQSNEDLKQEKSELE--EKLRVL 324
Query: 398 SDAASRRELEQQEVINKLQIAE---KQSSLQVES------LKLKLDETRE---RLVTSDN 445
+ +L +E+ KL++ E +Q S + E+ L+ ++E + L
Sbjct: 325 VTEKAGMQLNLEELQKKLEMTELLLQQFSSRCEAPDANQQLQQAMEERAQLEAHLGQVME 384
Query: 446 KVRLLETQVCK-EQNV---SASWKKRVEELENEIKKLREELE 483
VR L+ + K +N+ SA W++R++++ ++ LREE E
Sbjct: 385 SVRQLQMERDKYAENLKGESAMWRQRMQQMSEQVHTLREEKE 426
>sp|A7E2Y1|MYH7B_HUMAN Myosin-7B OS=Homo sapiens GN=MYH7B PE=2 SV=3
Length = 1941
Score = 35.0 bits (79), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 135/306 (44%), Gaps = 32/306 (10%)
Query: 296 HQLKV--LRDMLDAKQKELAEISRISAEQKHEMEDLNDRLSASMQSCTEANEIMKSQKVT 353
HQ V L+ LDA+ + E R+ + + ++ DL +L + + TEA + +
Sbjct: 1597 HQRAVESLQASLDAETRARNEALRLKKKMEGDLNDLELQLGHATRQATEAQAATRLMQAQ 1656
Query: 354 IDELKTQLDEERNLRRVDRENAEA-DLKAAVQKSQLETQEKLKRLSDAASRRELEQQEVI 412
+ E + DEE+ L E A+A + +A++ ++LE E L R L +QE++
Sbjct: 1657 LKEEQAGRDEEQRLAAELHEQAQALERRASLLAAELE--ELRAALEQGERSRRLAEQELL 1714
Query: 413 --------------------NKLQIAEKQSSLQVESLKLKLDETRERLVTSDNKVRLLET 452
KL+ Q S +VE + E E+ + ++
Sbjct: 1715 EATERLNLLHSQNTGLLNQKKKLEADLAQLSGEVEEAAQERREAEEKAKKAITDAAMMAE 1774
Query: 453 QVCKEQNVSASWKKRVEELENEIKKLREELESEKQAAREVAWAKVSGLELDILAATRDLD 512
++ KEQ+ SA ++ + LE +++L+ LE +QAA +V LE + +LD
Sbjct: 1775 ELKKEQDTSAHLERMKKTLEQTVRELQARLEEAEQAALRGGKKQVQKLEAKVRELEAELD 1834
Query: 513 FERRRLKAARERIMLRETQLRAFYSTTEEISVLFARQQE-------QLKAMQKTLEDEEN 565
E+++ A + + E +++ EE AR Q+ ++K+ ++ E+ E
Sbjct: 1835 AEQKKHAEALKGVRKHERRVKELAYQAEEDRKNLARMQDLVDKLQSKVKSYKRQFEEAEQ 1894
Query: 566 YENTSV 571
NT++
Sbjct: 1895 QANTNL 1900
>sp|Q076A3|MYH13_CANFA Myosin-13 OS=Canis familiaris GN=MYH13 PE=3 SV=1
Length = 1940
Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 112/239 (46%), Gaps = 25/239 (10%)
Query: 301 LRDMLDAKQKELAEISRISAEQKHEMEDLNDRLSASMQSCTEANEIMK--------SQKV 352
++ MLDA+ + + R+ + + ++ +L +L S + E + ++ SQ
Sbjct: 1603 MQSMLDAEIRSRNDALRLKKKMEGDLNELEIQLGHSSRQVAETQKHLRTVQGQLKDSQLH 1662
Query: 353 TIDELKTQLDEERNLRRVDRENAEADLKAAVQKSQLETQEKLKRLS-----DAASRREL- 406
D L++ D + L V+R N + K+ LE E+ +RLS DA+ R +L
Sbjct: 1663 LDDALRSNEDLKEQLAIVERRNGLLLEELEEMKAALEQTERTRRLSEQELLDASDRVQLL 1722
Query: 407 --EQQEVIN---KLQIAEKQSSLQVESLKLKLDETR---ERLVTSDNKVRLLETQVCKEQ 458
+ +IN KL++ Q +VE+ L E+R E+ + ++ ++ KEQ
Sbjct: 1723 HSQNTSLINTKKKLEVDIAQCQAEVEN---SLQESRNAEEKAKKAITDAAMMAEELKKEQ 1779
Query: 459 NVSASWKKRVEELENEIKKLREELESEKQAAREVAWAKVSGLELDILAATRDLDFERRR 517
+ SA ++ + LE +K L+ L+ +Q A + ++ LE + +LD E++R
Sbjct: 1780 DTSAHLERMKKNLEQTVKDLQHRLDEAEQLALKGGKKQIQKLEARVRELESELDAEQKR 1838
>sp|P39880|CUX1_HUMAN Homeobox protein cut-like 1 OS=Homo sapiens GN=CUX1 PE=1 SV=3
Length = 1505
Score = 34.7 bits (78), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 144/310 (46%), Gaps = 51/310 (16%)
Query: 293 SYLHQLKVLRDMLD-AKQKELAEISRISAEQKHEMEDLNDRLSASMQSCTEANEIMKSQK 351
++L+ K L D+ D +L + ++ ++ H++E N +L +++ + +K+Q+
Sbjct: 77 AFLNVYKRLIDVPDPVPALDLGQQLQLKVQRLHDIETENQKLRETLEEYNKEFAEVKNQE 136
Query: 352 VTIDELKTQLDEERNLRRVDRENAEADLKAAVQKSQLETQEKLKRLSDAASR-RELE--Q 408
VTI LK ++ E E LK + LE ++KL+ +D A + R+L+ Q
Sbjct: 137 VTIKALKEKIRE-----------YEQTLKNQAETIALEKEQKLQ--NDFAEKERKLQETQ 183
Query: 409 QEVINKLQIAEKQSSLQVESLKLKLDETRERLVTSDNKVRLLETQVCKEQNVSASW---- 464
+KL+ AE +V+SL+ L++TR L D K + E K +
Sbjct: 184 MSTTSKLEEAEH----KVQSLQTALEKTRTELF--DLKTKYDEETTAKADEIEMIMTDLE 237
Query: 465 --KKRVEELENEIKKLREELE---------SEKQAAREVAWA----KVSGLELDILAATR 509
+R E + E + LRE+L S+ Q A +V A S LE+++ A R
Sbjct: 238 RANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVEQAIEVLTRSSLEVELAAKER 297
Query: 510 DLDFERRRLKAARERIMLRETQLRAFYSTTEEISVL---FARQQEQLKAMQKTLEDEENY 566
++ +L +R+ T+LR ++ +IS L + + LK +++ L+ + +Y
Sbjct: 298 EIA----QLVEDVQRLQASLTKLRE--NSASQISQLEQQLSAKNSTLKQLEEKLKGQADY 351
Query: 567 ENTSVDIDLC 576
E ++++
Sbjct: 352 EEVKKELNIL 361
>sp|Q02224|CENPE_HUMAN Centromere-associated protein E OS=Homo sapiens GN=CENPE PE=1 SV=2
Length = 2701
Score = 34.3 bits (77), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 147/283 (51%), Gaps = 44/283 (15%)
Query: 296 HQLKVLRDMLDAKQKELAEISRISAEQKHEMEDLNDRLSASMQSCTEANEIMKSQKV--T 353
HQL L+ ++ QK+++E+ ++ K +++D + LS E + +QK+
Sbjct: 1830 HQLITLKKDVNETQKKVSEMEQL----KKQIKDQSLTLSK-----LEIENLNLAQKLHEN 1880
Query: 354 IDELKTQLDEERNLRRVDRE-NAEAD-LKAAVQKSQ---LETQEKLKRLSDAASRRELEQ 408
++E+K+ + E NLRRV+ E D LK ++Q+++ LE Q++LK A E
Sbjct: 1881 LEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELK----TARMLSKEH 1936
Query: 409 QEVINKLQIAEKQSSLQVESLKLKLDETRERLVTSDNKVRLLETQVCK-EQNVSASWKKR 467
+E ++KL+ + ++Q+ ++ LD++++ L +++ E Q+ + +++V+ S KK
Sbjct: 1937 KETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQLLRVKEDVNMSHKKI 1996
Query: 468 VEELENEIKKLREELESEK---QAAREVAWAKVSGL-----ELDILAATRDLDFERRRLK 519
NE+++L+++ E++ Q+ R + L E+ I+A RD E RR+K
Sbjct: 1997 -----NEMEQLKKQFEAQNLSMQSVRMDNFQLTKKLHESLEEIRIVAKERD---ELRRIK 2048
Query: 520 AARERIMLRETQLRAFYSTTEEISVLFARQQEQLKAMQKTLED 562
E + + Q F +T E+ + RQ Q+K ++ L D
Sbjct: 2049 ---ESLKMERDQ---FIATLREM-IARDRQNHQVKPEKRLLSD 2084
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.308 0.125 0.348
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 332,920,301
Number of Sequences: 539616
Number of extensions: 14799572
Number of successful extensions: 96793
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 411
Number of HSP's successfully gapped in prelim test: 3558
Number of HSP's that attempted gapping in prelim test: 68056
Number of HSP's gapped (non-prelim): 17859
length of query: 896
length of database: 191,569,459
effective HSP length: 127
effective length of query: 769
effective length of database: 123,038,227
effective search space: 94616396563
effective search space used: 94616396563
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 66 (30.0 bits)