Query 002652
Match_columns 896
No_of_seqs 292 out of 1081
Neff 5.7
Searched_HMMs 29240
Date Tue Mar 26 16:07:02 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/002652.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1370-1374//hhsearch_pdb/002652hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gxc_A CHK2, CDS1, serine/thre 1.0 1 1 154.3 12.8 113 73-205 24-145 (149)
2 1lgp_A Cell cycle checkpoint p 1.0 1 1 142.8 11.3 109 77-202 2-112 (116)
3 3i6u_A CDS1, serine/threonine- 1.0 1 1 141.7 11.7 112 74-205 5-125 (419)
4 1qu5_A Protein kinase SPK1; FH 1.0 1 1 141.1 7.3 127 65-199 15-145 (182)
5 2jqj_A DNA damage response pro 1.0 1 1 138.4 13.8 115 75-206 14-129 (151)
6 3elv_A PRE-mRNA leakage protei 1.0 1 1 138.0 8.7 130 59-200 46-204 (205)
7 4h87_A Kanadaptin; FHA domain 1.0 1 1 135.4 14.8 120 66-199 8-129 (130)
8 3els_A PRE-mRNA leakage protei 1.0 1 1 133.4 9.1 127 61-199 1-156 (158)
9 1dmz_A Protein (protein kinase 1.0 1 1 132.9 10.6 117 76-198 2-122 (158)
10 1g3g_A Protien kinase SPK1; FH 1.0 1 1 130.1 10.6 107 75-200 29-147 (164)
No 1
>1gxc_A CHK2, CDS1, serine/threonine-protein kinase CHK2; phosphoprotein-binding domain, checkpoint kinase, transferase; HET: TPO; 2.7A {Homo sapiens} SCOP: b.26.1.2
Probab=1.00 E-value=1 Score=154.34 Aligned_cols=113 Identities=24% Similarity=0.340 Sum_probs=92.1
Q ss_pred CCCCCCEEEEEEECCCCCCCCCCEEEEECCCCEEECCCCCCCCEECCCCC---------CCCCCEEEEEECCCCCCCCCC
Q ss_conf 88988408999512662235764048835992584489999851218975---------443443799831578989999
Q 002652 73 NYDPKVWGVLTAISNNARKRHQGINILLTADEHCIGRLVDDAHFQIDSNA---------VSANHCKIYRKKFASGDLDHS 143 (896)
Q Consensus 73 ~~~~~~WG~L~~i~~~~~~~~~g~~i~L~~~e~~iGR~~~~~d~~i~~~~---------IS~~Hc~I~r~~~~~~~~~~~ 143 (896)
.+.+.+||+|+++..+. ..+.|....++|||.+.| +++|.++. ||+.||+|++....+
T Consensus 24 ~~~~~~w~~L~~~~~~~------~~i~L~~~~~~IGR~~~~-di~l~d~~~~~~~~~~~VSr~Ha~I~~~~~~~------ 90 (149)
T 1gxc_A 24 EPTPAPWARLWALQDGF------ANLECVNDNYWFGRDKSC-EYCFDEPLLKRTDKYRTYSKKHFRIFREVGPK------ 90 (149)
T ss_dssp -----CCEEEEECSTTC------CCEEECSSEEEEESSTTC-SEECCCGGGGGSSGGGGSCTTCEEEEEEECTT------
T ss_pred CCCCCEEEEEEECCCCC------CEEEECCCCEEECCCCCC-CEEECCCCCCCCCCCCCCCHHHEEEEEECCCC------
T ss_conf 78887469999827997------669977988895689988-98978853345455785950154999989978------
Q ss_pred CCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCC
Q ss_conf 99984189985797752446820358997422579999997259998720899972346679
Q 002652 144 PSGCSSVCLKDTSTNGTYVNCERFKKNSSEVNIDHGDIISFAAPPQHDLAFAFVFRDVSRST 205 (896)
Q Consensus 144 ~~~~~~~~L~D~StNGTfVNg~ki~kng~~~~L~~GDvIsL~~~p~~~~af~FVF~dtlv~~ 205 (896)
+...|||.|.|+|||||||.+|.+ +....|.+||+|.|+.+. .+.|+|.+.....
T Consensus 91 --~~~~~~i~D~StNGT~VNg~~i~~-~~~~~L~~GD~I~lG~~~----~~~f~f~d~~~~~ 145 (149)
T 1gxc_A 91 --NSYIAYIEDHSGNGTFVNTELVGK-GKRRPLNNNSEIALSLSR----NKVFVFFDLTVDD 145 (149)
T ss_dssp --SSEEEEEEECCSSCEEETTEECCT-TCEEECCTTEEEEESSTT----CEEEEEEETTCC-
T ss_pred --CEEEEEEEECCCCCEEECCEECCC-CCEEECCCCCEEEECCCC----CEEEEEEECCCCC
T ss_conf --605799999998986999999789-983888899999987887----7499999799555
No 2
>1lgp_A Cell cycle checkpoint protein CHFR; FHA, tungstate, domain swapping; 2.00A {Homo sapiens} SCOP: b.26.1.2 PDB: 1lgq_A
Probab=1.00 E-value=1 Score=142.81 Aligned_cols=109 Identities=28% Similarity=0.466 Sum_probs=87.9
Q ss_pred CCEEEEEEECCCCCCCCCCEEEEECCCCEEECCCCCCCCEECCCC-CCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEC
Q ss_conf 840899951266223576404883599258448999985121897-5443443799831578989999999841899857
Q 002652 77 KVWGVLTAISNNARKRHQGINILLTADEHCIGRLVDDAHFQIDSN-AVSANHCKIYRKKFASGDLDHSPSGCSSVCLKDT 155 (896)
Q Consensus 77 ~~WG~L~~i~~~~~~~~~g~~i~L~~~e~~iGR~~~~~d~~i~~~-~IS~~Hc~I~r~~~~~~~~~~~~~~~~~~~L~D~ 155 (896)
.+||+|+++..+. .+..+.|....++|||.+.| +++|.+. .||+.||.|++.... ..|||.|.
T Consensus 2 ~~wg~L~~~~~~~----~~~~~~l~~~~~~iGR~~~~-di~l~~~~~vSr~Ha~i~~~~~~-----------~~~~l~D~ 65 (116)
T 1lgp_A 2 QPWGRLLRLGAEE----GEPHVLLRKREWTIGRRRGC-DLSFPSNKLVSGDHCRIVVDEKS-----------GQVTLEDT 65 (116)
T ss_dssp CCCEEECCTTCCS----SSCCEEECSSEEEEESSTTS-SEECTTCTTSCTTCEEEEECTTT-----------CCEEEEEC
T ss_pred CCEEEEEEECCCC----CCCEEEECCCCEEECCCCCC-CEEECCCCCCCHHHEEEEEECCC-----------CEEEEEEC
T ss_conf 8779999947988----76689989988897899788-88947999978427399998889-----------81999989
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCC-CCCEEEEECCCC
Q ss_conf 97752446820358997422579999997259998-720899972346
Q 002652 156 STNGTYVNCERFKKNSSEVNIDHGDIISFAAPPQH-DLAFAFVFRDVS 202 (896)
Q Consensus 156 StNGTfVNg~ki~kng~~~~L~~GDvIsL~~~p~~-~~af~FVF~dtl 202 (896)
|+||||||+.+|.+ +....|.+||+|.|+..+.. ...+.|+|.+..
T Consensus 66 S~NGt~vng~~l~~-~~~~~L~~GD~i~~G~~~~~~~~~~~f~f~~~~ 112 (116)
T 1lgp_A 66 STSGTVINKLKVVK-KQTCPLQTGDVIYLVYRKNEPEHNVAYLYESLS 112 (116)
T ss_dssp SSSCCCCCCCCCCC-SSCCCCCTTCEEEEECCSSCGGGCEEEECCCSC
T ss_pred CCCCCEECCEECCC-CCCEECCCCCEEEEECCCCCCCCEEEEEEECCC
T ss_conf 92985799999579-971898899999994568888850999997134
No 3
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=1.00 E-value=1 Score=141.65 Aligned_cols=112 Identities=24% Similarity=0.349 Sum_probs=90.1
Q ss_pred CCCCCEEEEEEECCCCCCCCCCEEEEECCCCEEECCCCCCCCEECCCCCC---------CCCCEEEEEECCCCCCCCCCC
Q ss_conf 89884089995126622357640488359925844899998512189754---------434437998315789899999
Q 002652 74 YDPKVWGVLTAISNNARKRHQGINILLTADEHCIGRLVDDAHFQIDSNAV---------SANHCKIYRKKFASGDLDHSP 144 (896)
Q Consensus 74 ~~~~~WG~L~~i~~~~~~~~~g~~i~L~~~e~~iGR~~~~~d~~i~~~~I---------S~~Hc~I~r~~~~~~~~~~~~ 144 (896)
+.+.+||+|+++..+. ..+.|..+.++|||++.| +++++++.| |++||.|++....
T Consensus 5 ~~~~~~g~l~~~~~~~------~~~~l~~~~~~iGR~~~~-~~~~~~~~~~~~~~~~~vS~~H~~i~~~~~~-------- 69 (419)
T 3i6u_A 5 PTPAPWARLWALQDGF------ANLECVNDNYWFGRDKSC-EYCFDEPLLKRTDKYRTYSKKHFRIFREVGP-------- 69 (419)
T ss_dssp -CCCCSEEEEECSSSS------CCEEECSSEEEEESSTTS-SEETTCTTGGGCSGGGGSCTTCEEEECCEET--------
T ss_pred CCCCCCEEEEECCCCC------CCEEECCCCEEECCCCCC-CEEECCCCCCCCCCCCCCCCCCEEEEEECCC--------
T ss_conf 5677755864168998------726746888785179866-8897886445444336534525699997588--------
Q ss_pred CCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCC
Q ss_conf 9984189985797752446820358997422579999997259998720899972346679
Q 002652 145 SGCSSVCLKDTSTNGTYVNCERFKKNSSEVNIDHGDIISFAAPPQHDLAFAFVFRDVSRST 205 (896)
Q Consensus 145 ~~~~~~~L~D~StNGTfVNg~ki~kng~~~~L~~GDvIsL~~~p~~~~af~FVF~dtlv~~ 205 (896)
.+..++||.|.|+||||||+.++++ +..+.|.+++.|.++... ...|+|.+.....
T Consensus 70 ~~~~~~~i~D~S~nGt~vn~~~~~~-~~~~~l~~~d~i~~~~~~----~~~~~~~~~~~~~ 125 (419)
T 3i6u_A 70 KNSYIAYIEDHSGNGTFVNTELVGK-GKRRPLNNNSEIALSLSR----NKVFVFFDLTVDD 125 (419)
T ss_dssp TTEECCEEEECCSSCEEETTEECCT-TCEEECCTTEEEEESSTT----CEEEEEEESCSSC
T ss_pred CCCEEEEEEECCCCCCEECCCCCCC-CCCCCCCCCCEEEEECCC----CCEEEEECCCCCC
T ss_conf 9714799987786774588102068-975448888876451266----6158982356552
No 4
>1qu5_A Protein kinase SPK1; FHA, RAD53, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2
Probab=1.00 E-value=1 Score=141.07 Aligned_cols=127 Identities=21% Similarity=0.340 Sum_probs=90.4
Q ss_pred CCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCC--EEECCCCCCCCEECCCCCCCCCCEEEEEECCCCCC--C
Q ss_conf 2478888888988408999512662235764048835992--58448999985121897544344379983157898--9
Q 002652 65 TYAAQPLQNYDPKVWGVLTAISNNARKRHQGINILLTADE--HCIGRLVDDAHFQIDSNAVSANHCKIYRKKFASGD--L 140 (896)
Q Consensus 65 ~~~~qp~~~~~~~~WG~L~~i~~~~~~~~~g~~i~L~~~e--~~iGR~~~~~d~~i~~~~IS~~Hc~I~r~~~~~~~--~ 140 (896)
+..-++.....++.|..|.++..... +..|.|.... ++|||.+.| +++|+++.||+.||.|++....... .
T Consensus 15 ~~~~~~~~~~~~g~~l~L~~~~~~~~----~~~i~L~~~~~~~~IGR~~~~-di~l~d~~VSr~HA~I~~~~~~~g~~~~ 89 (182)
T 1qu5_A 15 TENVKSSKKKGNGRFLTLKPLPDSII----QESLEIQQGVNPFFIGRSEDC-NCKIEDNRLSRVHCFIFKKRHAVGKSMY 89 (182)
T ss_dssp GGGSSCSCCSSSSCCEEECCCTTSSS----CSCCCBTTCCSSEEESSSTTS-SSCCCCTTSCSSCEEEEEECCCCCSSCC
T ss_pred HHHCEECCCCCCCCEEEEEECCCCCC----CEEEEECCCCCEEEECCCCCC-CEEECCCCCCHHHEEEEEECCCCCCCCC
T ss_conf 76701534589862899984798775----408997689814997789888-7897998839679599993576654322
Q ss_pred CCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEC
Q ss_conf 99999984189985797752446820358997422579999997259998720899972
Q 002652 141 DHSPSGCSSVCLKDTSTNGTYVNCERFKKNSSEVNIDHGDIISFAAPPQHDLAFAFVFR 199 (896)
Q Consensus 141 ~~~~~~~~~~~L~D~StNGTfVNg~ki~kng~~~~L~~GDvIsL~~~p~~~~af~FVF~ 199 (896)
..+..+...|||.|.|+|||||||.+|.+ +....|.+||+|.|+.++.- .+.|+|.
T Consensus 90 e~~~~~~~~~~l~DlStNGT~VNg~ri~~-~~~~~L~~GD~I~l~~d~~G--~~~l~f~ 145 (182)
T 1qu5_A 90 ESPAQGLDDIWYCHTGTNVSYLNNNRMIQ-GTKFLLQDGDEIKIIWDKNN--KFVIGFK 145 (182)
T ss_dssp SSCCCSCCEEEECCCSSSCCEETTEECCS-SEEEECCTTBCCEEEEEGGG--TEEEECC
T ss_pred CCCCCCCCEEEEEECCCCCEEECCEECCC-CCCEECCCCCEEEEEECCCC--CEEEEEE
T ss_conf 34446655099998995884899999679-96568489999999876899--8899999
No 5
>2jqj_A DNA damage response protein kinase DUN1; protein/phosphopeptide, cell cycle; HET: DNA; NMR {Saccharomyces cerevisiae} PDB: 2jql_A*
Probab=1.00 E-value=1 Score=138.40 Aligned_cols=115 Identities=20% Similarity=0.304 Sum_probs=87.2
Q ss_pred CCCCEEEEEEECCCCCCCCCCEEEEEC-CCCEEECCCCCCCCEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEE
Q ss_conf 988408999512662235764048835-9925844899998512189754434437998315789899999998418998
Q 002652 75 DPKVWGVLTAISNNARKRHQGINILLT-ADEHCIGRLVDDAHFQIDSNAVSANHCKIYRKKFASGDLDHSPSGCSSVCLK 153 (896)
Q Consensus 75 ~~~~WG~L~~i~~~~~~~~~g~~i~L~-~~e~~iGR~~~~~d~~i~~~~IS~~Hc~I~r~~~~~~~~~~~~~~~~~~~L~ 153 (896)
...+||+|+.+..+. +..+.|. ...++|||.+.| +++|.++.||+.||.|++........ ....|||.
T Consensus 14 ~~~~~~~L~~~~~~~-----g~~~~l~~~~~~~IGR~~~~-di~l~d~~VSr~Ha~I~~~~~~~~~~-----~~~~~~l~ 82 (151)
T 2jqj_A 14 EYTCLGHLVNLIPGK-----EQKVEITNRNVTTIGRSRSC-DVILSEPDISTFHAEFHLLQMDVDNF-----QRNLINVI 82 (151)
T ss_dssp SCCEEEEEEEEETTE-----EEEEEEECCSCEEEESSTTS-SEECCCTTCCTTSEEEEEEEEEETTE-----EEEEEEEE
T ss_pred CCCCEEEEEEECCCC-----CEEEEECCCCEEEECCCCCC-CEEECCCCCCCCCCEEEEECCCCCCC-----CCCEEEEE
T ss_conf 999669999965999-----50899748982896999889-99979988760057999961447767-----68879999
Q ss_pred ECCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCC
Q ss_conf 57977524468203589974225799999972599987208999723466799
Q 002652 154 DTSTNGTYVNCERFKKNSSEVNIDHGDIISFAAPPQHDLAFAFVFRDVSRSTP 206 (896)
Q Consensus 154 D~StNGTfVNg~ki~kng~~~~L~~GDvIsL~~~p~~~~af~FVF~dtlv~~~ 206 (896)
|.|+|||||||.+|.+ + ...|.+||+|.||.. ..|.|.|........
T Consensus 83 DlS~NGT~VNg~~i~~-~-~~~L~~GD~I~lG~~----~~~~f~~~~~~~~~~ 129 (151)
T 2jqj_A 83 DKSRNGTFINGNRLVK-K-DYILKNGDRIVFGKS----CSFLFKYASSSSTDI 129 (151)
T ss_dssp ECCSSCEEETTEECCS-S-CEEECSSEEEEETTT----EEEEEEECSSCCCCC
T ss_pred ECCCCCEEECCEECCC-C-CEECCCCCEEEECCC----CEEEEEECCCCCCCC
T ss_conf 9997883999999479-8-459789999998998----479999868883546
No 6
>3elv_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 2.40A {Saccharomyces cerevisiae} PDB: 2jkd_A
Probab=1.00 E-value=1 Score=138.01 Aligned_cols=130 Identities=17% Similarity=0.189 Sum_probs=92.0
Q ss_pred EEEECCCCCCCCCCCCCCCCE-------------EEEEEECCCCCCCCCCEEEEEC-CCCEEECCCCC------------
Q ss_conf 012122247888888898840-------------8999512662235764048835-99258448999------------
Q 002652 59 VFWVAGTYAAQPLQNYDPKVW-------------GVLTAISNNARKRHQGINILLT-ADEHCIGRLVD------------ 112 (896)
Q Consensus 59 ~~~va~~~~~qp~~~~~~~~W-------------G~L~~i~~~~~~~~~g~~i~L~-~~e~~iGR~~~------------ 112 (896)
..+|++++.++|.+..++.-| ...+.... .........+.|. ...|+|||.+.
T Consensus 46 ~~gv~lky~eP~~a~~P~~~w~~~~~~~~~~~~~~L~v~k~g-~k~~~~i~~~~L~~~s~y~IGR~~~~~~~~~~~~~~e 124 (205)
T 3elv_A 46 KEGIALKHVEPQDAISPDNYMDMLGLEARDRTMYELVIYRKN-DKDKGPWKRYDLNGRSCYLVGRELGHSLDTDLDDRTE 124 (205)
T ss_dssp ------CCCCCTTBCCHHHHHHHTTCCGGGSCCEEEEEEEGG-GCTTCCSEEEECSSCSEEEEEECCCC---------CC
T ss_pred CCCEEEECCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEEECC-CCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCC
T ss_conf 663797236998645984677215566345772689999699-7665310379935887435322355454433322356
Q ss_pred --CCCEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEC-CCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCC
Q ss_conf --9851218975443443799831578989999999841899857-9775244682035899742257999999725999
Q 002652 113 --DAHFQIDSNAVSANHCKIYRKKFASGDLDHSPSGCSSVCLKDT-STNGTYVNCERFKKNSSEVNIDHGDIISFAAPPQ 189 (896)
Q Consensus 113 --~~d~~i~~~~IS~~Hc~I~r~~~~~~~~~~~~~~~~~~~L~D~-StNGTfVNg~ki~kng~~~~L~~GDvIsL~~~p~ 189 (896)
.|||+|+++.||+.||.|.+.... +...|||.|. |+|||||||.+|.+ +..+.|.+||+|.||.++.
T Consensus 125 ~~~cDIvL~dp~VSR~HA~I~~~~~~---------~~~~~~l~DLgStNGTfVNG~rI~~-~~~~~L~~GD~I~fG~s~r 194 (205)
T 3elv_A 125 IVVADIGIPEETSSKQHCVIQFRNVR---------GILKCYVMDLDSSNGTCLNNVVIPG-ARYIELRSGDVLTLSEFEE 194 (205)
T ss_dssp CCCCSEEECCTTSCTTCEEEEEEEET---------TEEEEEEEECSCSSCCEETTEECCB-TSCEECCTTCEEESSSSGG
T ss_pred CCCCEEEECCCCCCCCCEEEEEECCC---------CCEEEEEEECCCCCCCEECCEECCC-CCEEECCCCCEEEECCCCC
T ss_conf 74320896999987201899996689---------8126999969989988699999889-9615879999999798887
Q ss_pred CCCCEEEEECC
Q ss_conf 87208999723
Q 002652 190 HDLAFAFVFRD 200 (896)
Q Consensus 190 ~~~af~FVF~d 200 (896)
...+.|+|..
T Consensus 195 -~~~~el~f~~ 204 (205)
T 3elv_A 195 -DNDYELIFMN 204 (205)
T ss_dssp -GCSEEEEEEE
T ss_pred -CCCEEEEEEE
T ss_conf -8986999983
No 7
>4h87_A Kanadaptin; FHA domain of PF00498, mRNA processing, nucleus, structural joint center for structural genomics, JCSG, protein structu initiative; HET: SO4; 1.55A {Homo sapiens}
Probab=1.00 E-value=1 Score=135.38 Aligned_cols=120 Identities=19% Similarity=0.248 Sum_probs=83.1
Q ss_pred CCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECC-CCEEECCCCCCCCEECCCCCCCCCCEEEEEECCCCCCCCCCC
Q ss_conf 4788888889884089995126622357640488359-925844899998512189754434437998315789899999
Q 002652 66 YAAQPLQNYDPKVWGVLTAISNNARKRHQGINILLTA-DEHCIGRLVDDAHFQIDSNAVSANHCKIYRKKFASGDLDHSP 144 (896)
Q Consensus 66 ~~~qp~~~~~~~~WG~L~~i~~~~~~~~~g~~i~L~~-~e~~iGR~~~~~d~~i~~~~IS~~Hc~I~r~~~~~~~~~~~~ 144 (896)
|.+++-+.+++.+|...+. ..+.. ...+.|.. ..|+|||.+.| |++|+++.||+.||.|+++... ..... .
T Consensus 8 y~~P~wa~~p~~~~~L~v~-k~g~~----~~~~~L~~~~~~~IGR~~~~-di~l~~~~VSr~HA~I~~r~~~-~~~~~-~ 79 (130)
T 4h87_A 8 YQEPPWGGPATAPYSLETL-KGGTI----LGTRSLKGTSYCLFGRLSGC-DVCLEHPSVSRYHAVLQHRASG-PDGEC-D 79 (130)
T ss_dssp CCCCTTBCCCCSCCEEEEE-ETTEE----EEEEECTTCSEEEEESSTTS-SEECCCTTSCSSCEEEEEBCCC-CCC----
T ss_pred CCCCCCCCCCCCCEEEEEE-ECCEE----EEEEEECCCCEEEECCCCCC-CEEECCCCCCHHCEEEEEECCC-CCCCE-E
T ss_conf 8788876689999799999-89945----11698289824998688478-9996899815024799982366-74302-1
Q ss_pred CCCCEEEEEEC-CCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEC
Q ss_conf 99841899857-97752446820358997422579999997259998720899972
Q 002652 145 SGCSSVCLKDT-STNGTYVNCERFKKNSSEVNIDHGDIISFAAPPQHDLAFAFVFR 199 (896)
Q Consensus 145 ~~~~~~~L~D~-StNGTfVNg~ki~kng~~~~L~~GDvIsL~~~p~~~~af~FVF~ 199 (896)
.....|||.|. |+|||||||.+|.+ +.++.|.+||+|.||... ..|||+
T Consensus 80 ~~~~~~~l~Dl~StNGT~vNg~ri~~-~~~~~L~~GD~I~~G~st-----r~yvl~ 129 (130)
T 4h87_A 80 SNGPGFYLYDLGSTHGTFLNKTRIPP-RTYCRVHVGHVVRFGGST-----RLFILQ 129 (130)
T ss_dssp ---CCEEEEECSCSSCEEETTEECCT-TCCEECCTTCEEEETTCS-----EEEEEE
T ss_pred CCCCCCEEEECCCCCCEEECCEECCC-CCEEECCCCCEEEECCCE-----EEEEEC
T ss_conf 13783268528998756899999889-951699999999988963-----899980
No 8
>3els_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 1.80A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=133.42 Aligned_cols=127 Identities=17% Similarity=0.228 Sum_probs=88.4
Q ss_pred EECCCCCCCCCCCCCCCC-------------EEEEEEECCCCCCCCCCEEEEEC-CCCEEECCCCC--------------
Q ss_conf 212224788888889884-------------08999512662235764048835-99258448999--------------
Q 002652 61 WVAGTYAAQPLQNYDPKV-------------WGVLTAISNNARKRHQGINILLT-ADEHCIGRLVD-------------- 112 (896)
Q Consensus 61 ~va~~~~~qp~~~~~~~~-------------WG~L~~i~~~~~~~~~g~~i~L~-~~e~~iGR~~~-------------- 112 (896)
+|+.++.++|.+..+..- |..++.... .........+.|. ...|+|||.+.
T Consensus 1 ~~~l~~~ep~~a~~p~~~w~~~~~~~~~~~~~~l~v~k~g-~~~~~~~~~~~L~~~~~~~IGR~~~~~~~~~~~~~n~~~ 79 (158)
T 3els_A 1 GAMGKHVEPQDAISPDNYMDMLGLEARDRTMYELVIYRKN-DKDKGPWKRYDLNGRSCYLVGRELGHSLDTDLDDRTEIV 79 (158)
T ss_dssp ----CCCCCTTBCCHHHHHHHTTCCGGGSCCEEEEEEEGG-GGGGCCSEEEECSSCSEEEEEECCCC---------CCCC
T ss_pred CCEEEECCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEECC-CCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCC
T ss_conf 9246745995323985332003367455774699999699-667632038995698716763454555433333225662
Q ss_pred CCCEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEC-CCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCCC
Q ss_conf 9851218975443443799831578989999999841899857-977524468203589974225799999972599987
Q 002652 113 DAHFQIDSNAVSANHCKIYRKKFASGDLDHSPSGCSSVCLKDT-STNGTYVNCERFKKNSSEVNIDHGDIISFAAPPQHD 191 (896)
Q Consensus 113 ~~d~~i~~~~IS~~Hc~I~r~~~~~~~~~~~~~~~~~~~L~D~-StNGTfVNg~ki~kng~~~~L~~GDvIsL~~~p~~~ 191 (896)
.||++|+++.||+.||.|.+.... +...|||.|. |+|||||||.+|.+ +....|.+||+|.||.... .
T Consensus 80 ~~Di~l~~~~VSr~HA~I~~~~~~---------~~~~~~l~Dl~StNGT~VNg~ri~~-~~~~~L~~GD~I~~G~s~~-~ 148 (158)
T 3els_A 80 VADIGIPEETSSKQHCVIQFRNVR---------GILKCYVMDLDSSNGTCLNNVVIPG-ARYIELRSGDVLTLSEFEE-D 148 (158)
T ss_dssp CCSEEECCTTSCSSCEEEEEEEET---------TEEEEEEEECSCSSCCEETTEECCT-TCCEECCTTEEEESSSCGG-G
T ss_pred CCCEECCCCCCCCCCEEEEEECCC---------CEEEEEEEECCCCCCCEECCEECCC-CCEEECCCCCEEEECCCCC-C
T ss_conf 078976999888242899998158---------8137999969988866799999679-9658837999999878988-8
Q ss_pred CCEEEEEC
Q ss_conf 20899972
Q 002652 192 LAFAFVFR 199 (896)
Q Consensus 192 ~af~FVF~ 199 (896)
..+.|+|.
T Consensus 149 ~~~elvF~ 156 (158)
T 3els_A 149 NDYELIFM 156 (158)
T ss_dssp CCEEEEEE
T ss_pred CCEEEEEE
T ss_conf 97899997
No 9
>1dmz_A Protein (protein kinase SPK1); beta-sandwich, antiparallel beta-sheets, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1fhq_A 1fhr_A* 1j4k_A* 1j4l_A* 1k2m_A* 1k2n_A*
Probab=1.00 E-value=1 Score=132.93 Aligned_cols=117 Identities=21% Similarity=0.357 Sum_probs=84.3
Q ss_pred CCCEEEEEEECCCCCCCCCCEEEEECCCC--EEECCCCCCCCEECCCCCCCCCCEEEEEECCCCCC--CCCCCCCCCEEE
Q ss_conf 88408999512662235764048835992--58448999985121897544344379983157898--999999984189
Q 002652 76 PKVWGVLTAISNNARKRHQGINILLTADE--HCIGRLVDDAHFQIDSNAVSANHCKIYRKKFASGD--LDHSPSGCSSVC 151 (896)
Q Consensus 76 ~~~WG~L~~i~~~~~~~~~g~~i~L~~~e--~~iGR~~~~~d~~i~~~~IS~~Hc~I~r~~~~~~~--~~~~~~~~~~~~ 151 (896)
.+.|-.|.++..... +..|.|.... ++|||.+.| +++|+++.||+.||.|++....... ...+..+...||
T Consensus 2 ~g~~l~L~p~~~~~~----~~~i~L~~~~~~~~IGR~~~~-di~l~d~~VSr~Ha~I~~~~~~~g~~~~~~~~~~~~~~~ 76 (158)
T 1dmz_A 2 NGRFLTLKPLPDSII----QESLEIQQGVNPFFIGRSEDC-NCKIEDNRLSRVHCFIFKKRHAVGKSMYESPAQGLDDIW 76 (158)
T ss_dssp CSCCEEEEECTTSSC----CCCEEETTSCSCEEEESSTTS-SEECCCTTSCSSSEEEEEEECCCCCCCSSCSCSSCEEEE
T ss_pred CCEEEEEEECCCCCC----CEEEEECCCCCEEEECCCCCC-CEEECCCCCCHHHEEEEEECCCCCCCCCCCCCCCCCCEE
T ss_conf 966999986898765----408997589845997789998-889699981868929999567665432334546554099
Q ss_pred EEECCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEE
Q ss_conf 98579775244682035899742257999999725999872089997
Q 002652 152 LKDTSTNGTYVNCERFKKNSSEVNIDHGDIISFAAPPQHDLAFAFVF 198 (896)
Q Consensus 152 L~D~StNGTfVNg~ki~kng~~~~L~~GDvIsL~~~p~~~~af~FVF 198 (896)
|.|.|+|||||||.+|.+ +....|.+||+|.|+.++.-...|.|.+
T Consensus 77 l~DlStNGT~VNg~ri~~-~~~~~L~~GD~I~l~~d~~G~~~l~f~~ 122 (158)
T 1dmz_A 77 YCHTGTNVSYLNNNRMIQ-GTKFLLQDGDEIKIIWDKNNKFVIGFKV 122 (158)
T ss_dssp EEECSTTCCEETTEECCS-SEEEECCSSCCEESCCCTTTTCCCCEEE
T ss_pred EEECCCCCEEECCEECCC-CCEEECCCCCEEEEEECCCCCEEEEEEE
T ss_conf 998996980899999689-9508937999999965489988999999
No 10
>1g3g_A Protien kinase SPK1; FHA domain, RAD53, phosphopeptide, phosphoprotein, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1j4o_A 1j4p_A* 1j4q_A* 1k3j_A 1k3n_A* 1k3q_A* 2a0t_A* 2jqi_A*
Probab=1.00 E-value=1 Score=130.07 Aligned_cols=107 Identities=18% Similarity=0.216 Sum_probs=81.6
Q ss_pred CCCCEEEEEEECCCCCCCCCCEEEEECC-----------CCEEECCCCCCCCEECCCC-CCCCCCEEEEEECCCCCCCCC
Q ss_conf 9884089995126622357640488359-----------9258448999985121897-544344379983157898999
Q 002652 75 DPKVWGVLTAISNNARKRHQGINILLTA-----------DEHCIGRLVDDAHFQIDSN-AVSANHCKIYRKKFASGDLDH 142 (896)
Q Consensus 75 ~~~~WG~L~~i~~~~~~~~~g~~i~L~~-----------~e~~iGR~~~~~d~~i~~~-~IS~~Hc~I~r~~~~~~~~~~ 142 (896)
.+.+|++|+.+.... .+..+.|.. ..++|||.+.| +++|+++ .||+.||.|++... +
T Consensus 29 ~~~~~~~L~v~~G~~----~g~~~~l~~~~v~~~~~~~~~~~~IGR~~~~-di~l~d~~~vSr~Ha~I~~~~~------g 97 (164)
T 1g3g_A 29 GENIVCRVICTTGQI----PIRDLSADISQVLKEKRSIKKVWTFGRNPAC-DYHLGNISRLSNKHFQILLGED------G 97 (164)
T ss_dssp CSSCCEEEECSSSSS----CCEEECCCHHHHHHCSSSCCEEEEEESSSSS-SEECCCCTTTTSSCEEEEECST------T
T ss_pred CCCCCEEEEEECCCC----CCEEEEECCCCCCCCCCCCCCCEEECCCCCC-CEEECCCCCCCHHHEEEEECCC------C
T ss_conf 899558999966998----8859990365433333366773897899999-9895896785833779998889------9
Q ss_pred CCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECC
Q ss_conf 9999841899857977524468203589974225799999972599987208999723
Q 002652 143 SPSGCSSVCLKDTSTNGTYVNCERFKKNSSEVNIDHGDIISFAAPPQHDLAFAFVFRD 200 (896)
Q Consensus 143 ~~~~~~~~~L~D~StNGTfVNg~ki~kng~~~~L~~GDvIsL~~~p~~~~af~FVF~d 200 (896)
.|||.|.|+|||||||.+|.+ +....|.+||+|.||.... ...+.|+|.-
T Consensus 98 ------~~~l~DlS~NGT~vNg~~i~~-~~~~~L~~GD~I~iG~~~~-~~~~~f~~~~ 147 (164)
T 1g3g_A 98 ------NLLLNDISTNGTWLNGQKVEK-NSNQLLSQGDEITVGVGVE-SDILSLVIFI 147 (164)
T ss_dssp ------CEEEEECCSSCEEETTEEECT-TEEEECCTTCEEEESCSST-TSCEEEEEEE
T ss_pred ------CEEEEECCCCCEEECCEECCC-CCCEECCCCCEEEECCCCC-CCCEEEEEEE
T ss_conf ------899998898982899999589-9746918999999899888-7748999995
Done!