Query 002656
Match_columns 896
No_of_seqs 293 out of 2221
Neff 8.6
Searched_HMMs 46136
Date Fri Mar 29 04:26:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002656.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002656hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0206 P-type ATPase [General 100.0 4E-158 8E-163 1401.1 61.0 814 33-895 11-828 (1151)
2 PLN03190 aminophospholipid tra 100.0 1E-144 2E-149 1335.7 80.3 817 35-895 69-905 (1178)
3 TIGR01652 ATPase-Plipid phosph 100.0 9E-137 2E-141 1281.4 80.9 798 54-895 1-802 (1057)
4 KOG0210 P-type ATPase [Inorgan 100.0 8E-126 2E-130 1026.5 50.4 747 36-895 63-815 (1051)
5 COG0474 MgtA Cation transport 100.0 1.3E-99 3E-104 926.0 44.3 609 47-895 50-674 (917)
6 TIGR01657 P-ATPase-V P-type AT 100.0 9.9E-92 2.1E-96 873.5 58.0 666 47-896 145-836 (1054)
7 KOG0202 Ca2+ transporting ATPa 100.0 4.3E-93 9.3E-98 794.0 35.4 662 46-896 28-714 (972)
8 TIGR01523 ATPase-IID_K-Na pota 100.0 3E-91 6.4E-96 860.1 49.2 682 46-893 31-779 (1053)
9 TIGR01106 ATPase-IIC_X-K sodiu 100.0 6.5E-91 1.4E-95 860.5 48.3 647 46-895 41-719 (997)
10 TIGR01517 ATPase-IIB_Ca plasma 100.0 4.9E-90 1.1E-94 850.9 44.5 612 46-895 65-704 (941)
11 KOG0204 Calcium transporting A 100.0 5E-89 1.1E-93 759.9 39.8 621 47-896 125-775 (1034)
12 TIGR01116 ATPase-IIA1_Ca sarco 100.0 5.5E-88 1.2E-92 829.4 52.4 637 74-893 1-663 (917)
13 PRK10517 magnesium-transportin 100.0 3.8E-86 8.3E-91 805.1 46.3 580 46-896 72-674 (902)
14 KOG0208 Cation transport ATPas 100.0 9.3E-86 2E-90 743.8 43.2 691 48-896 167-887 (1140)
15 TIGR01522 ATPase-IIA2_Ca golgi 100.0 1E-84 2.3E-89 798.8 50.0 602 46-893 29-651 (884)
16 TIGR01524 ATPase-IIIB_Mg magne 100.0 5.6E-85 1.2E-89 796.0 46.9 579 46-896 38-639 (867)
17 PRK15122 magnesium-transportin 100.0 4E-85 8.7E-90 797.7 44.8 595 46-896 50-674 (903)
18 TIGR01647 ATPase-IIIA_H plasma 100.0 4.1E-84 8.8E-89 779.0 47.1 553 47-893 7-567 (755)
19 PRK01122 potassium-transportin 100.0 2.5E-73 5.5E-78 662.6 45.5 493 75-893 28-540 (679)
20 KOG0209 P-type ATPase [Inorgan 100.0 1.3E-75 2.9E-80 646.7 23.2 640 52-886 174-831 (1160)
21 KOG0203 Na+/K+ ATPase, alpha s 100.0 3.9E-75 8.4E-80 648.2 24.4 647 48-896 65-743 (1019)
22 PRK14010 potassium-transportin 100.0 8.1E-72 1.8E-76 649.4 45.2 489 76-894 28-537 (673)
23 TIGR01497 kdpB K+-transporting 100.0 2.2E-69 4.7E-74 628.0 46.2 494 75-892 27-540 (675)
24 TIGR01494 ATPase_P-type ATPase 100.0 6.5E-64 1.4E-68 583.4 42.9 431 106-896 4-438 (499)
25 COG2217 ZntA Cation transport 100.0 2.8E-63 6.1E-68 577.6 39.2 449 109-896 177-636 (713)
26 KOG0205 Plasma membrane H+-tra 100.0 3.1E-63 6.8E-68 536.7 21.0 562 47-893 42-617 (942)
27 PRK11033 zntA zinc/cadmium/mer 100.0 5.5E-59 1.2E-63 559.1 43.3 438 111-892 211-660 (741)
28 KOG0207 Cation transport ATPas 100.0 5.3E-60 1.2E-64 536.2 30.9 459 113-892 348-817 (951)
29 TIGR01525 ATPase-IB_hvy heavy 100.0 7.1E-57 1.5E-61 529.0 39.5 440 111-887 23-473 (556)
30 TIGR01511 ATPase-IB1_Cu copper 100.0 2.8E-56 6.2E-61 522.0 35.9 426 110-887 58-492 (562)
31 TIGR01512 ATPase-IB2_Cd heavy 100.0 2.6E-55 5.7E-60 512.3 39.0 413 117-887 29-451 (536)
32 PRK10671 copA copper exporting 100.0 1.2E-54 2.6E-59 532.5 41.0 447 110-895 290-748 (834)
33 COG2216 KdpB High-affinity K+ 100.0 3.8E-52 8.3E-57 441.8 26.5 462 108-891 71-540 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 8.8E-31 1.9E-35 274.9 19.6 222 109-411 2-230 (230)
35 PF00702 Hydrolase: haloacid d 99.9 2E-22 4.4E-27 209.1 14.6 97 706-881 115-215 (215)
36 PF13246 Hydrolase_like2: Puta 99.5 3.2E-14 7E-19 124.9 5.6 90 531-638 1-90 (91)
37 COG4087 Soluble P-type ATPase 99.4 5.4E-13 1.2E-17 118.6 9.9 107 706-892 18-124 (152)
38 TIGR02137 HSK-PSP phosphoserin 98.7 5.3E-08 1.1E-12 99.4 11.1 110 718-894 68-177 (203)
39 COG0560 SerB Phosphoserine pho 98.7 1E-07 2.2E-12 97.7 11.7 112 717-891 76-190 (212)
40 PRK11133 serB phosphoserine ph 98.5 7.5E-07 1.6E-11 97.2 10.6 110 718-890 181-293 (322)
41 PF12710 HAD: haloacid dehalog 98.3 3E-06 6.5E-11 86.0 10.5 92 721-878 92-192 (192)
42 COG0561 Cof Predicted hydrolas 98.2 8.7E-06 1.9E-10 87.3 10.8 49 711-759 12-61 (264)
43 KOG1615 Phosphoserine phosphat 98.2 4.3E-06 9.3E-11 80.6 7.1 111 718-889 88-201 (227)
44 TIGR01482 SPP-subfamily Sucros 98.2 7.5E-06 1.6E-10 85.5 9.6 172 718-895 15-201 (225)
45 TIGR00338 serB phosphoserine p 98.1 1.2E-05 2.6E-10 83.6 10.2 111 718-892 85-199 (219)
46 PRK01158 phosphoglycolate phos 98.1 9.2E-06 2E-10 85.2 9.4 172 711-889 12-201 (230)
47 TIGR03333 salvage_mtnX 2-hydro 98.0 3.4E-05 7.4E-10 79.9 11.6 112 717-885 69-180 (214)
48 PRK13582 thrH phosphoserine ph 98.0 3.6E-05 7.8E-10 79.1 11.4 105 718-890 68-173 (205)
49 TIGR01670 YrbI-phosphatas 3-de 98.0 2E-05 4.4E-10 76.9 8.9 33 726-758 36-68 (154)
50 PRK10513 sugar phosphate phosp 98.0 1.8E-05 4E-10 85.1 9.3 41 718-758 20-60 (270)
51 TIGR01486 HAD-SF-IIB-MPGP mann 98.0 4.3E-05 9.4E-10 81.5 11.4 40 719-758 17-56 (256)
52 TIGR01487 SPP-like sucrose-pho 98.0 3.6E-05 7.7E-10 79.8 10.1 170 718-895 18-199 (215)
53 PRK15126 thiamin pyrimidine py 98.0 2.2E-05 4.9E-10 84.5 8.9 41 718-758 19-59 (272)
54 TIGR01491 HAD-SF-IB-PSPlk HAD- 97.9 5.7E-05 1.2E-09 77.2 11.1 108 718-888 80-190 (201)
55 TIGR01488 HAD-SF-IB Haloacid D 97.9 4.2E-05 9.1E-10 76.5 9.2 101 719-880 74-177 (177)
56 PRK10976 putative hydrolase; P 97.9 3.9E-05 8.5E-10 82.3 9.2 41 718-758 19-59 (266)
57 TIGR01489 DKMTPPase-SF 2,3-dik 97.9 4.7E-05 1E-09 76.9 9.0 114 717-885 71-186 (188)
58 PRK03669 mannosyl-3-phosphogly 97.9 0.00039 8.4E-09 74.8 16.4 39 719-757 25-63 (271)
59 TIGR02726 phenyl_P_delta pheny 97.8 4.1E-05 8.9E-10 75.5 7.5 34 725-758 41-74 (169)
60 PF08282 Hydrolase_3: haloacid 97.8 2.3E-05 5E-10 83.0 5.6 42 717-758 14-55 (254)
61 TIGR01490 HAD-SF-IB-hyp1 HAD-s 97.8 8.1E-05 1.7E-09 76.3 9.4 113 715-889 84-199 (202)
62 PRK09552 mtnX 2-hydroxy-3-keto 97.7 0.00021 4.7E-09 74.2 11.6 110 718-885 74-184 (219)
63 TIGR02461 osmo_MPG_phos mannos 97.7 0.00029 6.3E-09 73.4 11.8 43 716-758 13-55 (225)
64 cd01427 HAD_like Haloacid deha 97.7 0.00013 2.9E-09 68.8 8.2 117 715-885 21-138 (139)
65 PRK09484 3-deoxy-D-manno-octul 97.6 0.00017 3.6E-09 72.7 8.1 34 725-758 55-88 (183)
66 PLN02954 phosphoserine phospha 97.6 0.00028 6.2E-09 73.5 10.2 41 718-758 84-124 (224)
67 PLN02887 hydrolase family prot 97.6 0.00013 2.8E-09 85.6 7.9 41 718-758 325-365 (580)
68 PRK12702 mannosyl-3-phosphogly 97.6 0.0014 2.9E-08 69.4 14.2 41 718-758 18-58 (302)
69 TIGR01485 SPP_plant-cyano sucr 97.5 0.00076 1.6E-08 71.6 12.4 172 716-889 19-212 (249)
70 TIGR02463 MPGP_rel mannosyl-3- 97.5 0.00067 1.4E-08 70.6 11.6 37 722-758 20-56 (221)
71 PRK10530 pyridoxal phosphate ( 97.5 0.00041 8.9E-09 74.7 10.3 41 718-758 20-60 (272)
72 PRK00192 mannosyl-3-phosphogly 97.5 0.0015 3.1E-08 70.5 14.5 42 717-758 20-61 (273)
73 TIGR01484 HAD-SF-IIB HAD-super 97.5 0.00052 1.1E-08 70.4 10.1 169 718-886 17-204 (204)
74 TIGR02471 sucr_syn_bact_C sucr 97.5 0.0011 2.4E-08 69.8 12.5 47 843-889 152-203 (236)
75 PRK10187 trehalose-6-phosphate 97.4 0.0015 3.2E-08 70.0 12.7 166 718-887 36-220 (266)
76 PRK14502 bifunctional mannosyl 97.4 0.0018 4E-08 75.9 13.9 39 719-757 434-472 (694)
77 TIGR00099 Cof-subfamily Cof su 97.4 0.00035 7.6E-09 74.5 7.3 41 718-758 16-56 (256)
78 PRK13222 phosphoglycolate phos 97.2 0.0014 3.1E-08 68.2 9.3 42 717-758 92-133 (226)
79 COG0546 Gph Predicted phosphat 97.1 0.0027 5.9E-08 66.0 10.3 44 716-759 87-130 (220)
80 TIGR01449 PGP_bact 2-phosphogl 97.0 0.0026 5.7E-08 65.6 8.6 42 718-759 85-126 (213)
81 PLN02382 probable sucrose-phos 96.9 0.012 2.6E-07 67.0 14.0 163 725-889 35-223 (413)
82 PRK13223 phosphoglycolate phos 96.7 0.0067 1.5E-07 65.2 9.4 42 717-758 100-141 (272)
83 TIGR01454 AHBA_synth_RP 3-amin 96.7 0.0072 1.6E-07 62.0 9.2 41 718-758 75-115 (205)
84 PTZ00174 phosphomannomutase; P 96.7 0.015 3.3E-07 61.5 11.6 48 842-890 180-234 (247)
85 PRK08238 hypothetical protein; 96.6 0.011 2.3E-07 68.4 10.9 41 718-758 72-112 (479)
86 PRK14501 putative bifunctional 96.6 0.037 8E-07 68.1 16.3 166 719-887 515-700 (726)
87 TIGR01545 YfhB_g-proteo haloac 96.6 0.017 3.6E-07 59.5 11.2 111 718-891 94-205 (210)
88 PRK13288 pyrophosphatase PpaX; 96.6 0.0064 1.4E-07 62.9 8.1 42 718-759 82-123 (214)
89 TIGR01544 HAD-SF-IE haloacid d 96.6 0.0094 2E-07 63.2 9.2 44 718-761 121-164 (277)
90 smart00831 Cation_ATPase_N Cat 96.5 0.0014 3E-08 53.4 2.1 46 47-95 16-61 (64)
91 PRK13225 phosphoglycolate phos 96.5 0.011 2.4E-07 63.4 9.5 42 718-759 142-183 (273)
92 PF00690 Cation_ATPase_N: Cati 96.5 0.00058 1.3E-08 56.6 -0.3 45 46-93 25-69 (69)
93 PRK13226 phosphoglycolate phos 96.5 0.01 2.3E-07 62.0 9.0 41 718-758 95-135 (229)
94 PRK11590 hypothetical protein; 96.4 0.028 6.1E-07 57.9 11.2 112 718-892 95-207 (211)
95 COG1778 Low specificity phosph 96.2 0.008 1.7E-07 56.7 5.2 34 725-758 42-75 (170)
96 TIGR01548 HAD-SF-IA-hyp1 haloa 96.1 0.026 5.7E-07 57.4 9.4 44 716-759 104-147 (197)
97 TIGR00685 T6PP trehalose-phosp 96.1 0.062 1.4E-06 56.8 12.5 41 840-880 159-202 (244)
98 TIGR01672 AphA HAD superfamily 96.1 0.016 3.5E-07 60.5 7.5 40 719-758 115-158 (237)
99 TIGR01428 HAD_type_II 2-haloal 96.1 0.026 5.6E-07 57.5 9.0 41 718-758 92-132 (198)
100 PRK10826 2-deoxyglucose-6-phos 95.9 0.021 4.6E-07 59.3 7.7 43 717-759 91-133 (222)
101 TIGR01422 phosphonatase phosph 95.9 0.033 7.1E-07 59.2 9.0 42 718-759 99-140 (253)
102 PRK11009 aphA acid phosphatase 95.8 0.031 6.7E-07 58.3 8.3 41 717-757 113-157 (237)
103 PRK14988 GMP/IMP nucleotidase; 95.6 0.069 1.5E-06 55.6 9.9 42 718-759 93-134 (224)
104 PLN02205 alpha,alpha-trehalose 95.5 0.47 1E-05 58.9 18.1 161 718-881 616-801 (854)
105 PLN03243 haloacid dehalogenase 95.5 0.069 1.5E-06 56.9 9.6 42 718-759 109-150 (260)
106 PF13419 HAD_2: Haloacid dehal 95.4 0.05 1.1E-06 53.5 8.0 45 715-759 74-118 (176)
107 TIGR01662 HAD-SF-IIIA HAD-supe 95.4 0.073 1.6E-06 50.2 8.5 41 717-757 24-72 (132)
108 PRK13478 phosphonoacetaldehyde 95.4 0.082 1.8E-06 56.7 9.8 41 718-758 101-141 (267)
109 TIGR01509 HAD-SF-IA-v3 haloaci 95.2 0.093 2E-06 52.3 9.3 40 718-758 85-124 (183)
110 PLN02580 trehalose-phosphatase 95.2 0.51 1.1E-05 52.6 15.6 46 842-887 292-351 (384)
111 PRK06769 hypothetical protein; 95.0 0.12 2.6E-06 51.4 9.2 40 706-745 12-55 (173)
112 TIGR01685 MDP-1 magnesium-depe 95.0 0.13 2.8E-06 51.0 9.2 51 708-758 35-86 (174)
113 TIGR03351 PhnX-like phosphonat 95.0 0.082 1.8E-06 54.8 8.2 42 717-758 86-127 (220)
114 COG4359 Uncharacterized conser 95.0 0.09 1.9E-06 51.0 7.5 38 847-885 146-183 (220)
115 PLN02770 haloacid dehalogenase 94.8 0.12 2.5E-06 54.8 8.8 42 718-759 108-149 (248)
116 PF05116 S6PP: Sucrose-6F-phos 94.6 0.17 3.7E-06 53.5 9.4 157 730-890 31-210 (247)
117 TIGR01990 bPGM beta-phosphoglu 94.6 0.089 1.9E-06 52.7 7.1 40 717-758 86-125 (185)
118 TIGR02253 CTE7 HAD superfamily 94.5 0.16 3.4E-06 52.7 8.8 41 718-758 94-134 (221)
119 PHA02530 pseT polynucleotide k 94.4 0.11 2.4E-06 56.7 7.8 45 714-758 183-227 (300)
120 TIGR01656 Histidinol-ppas hist 94.3 0.16 3.5E-06 49.0 7.8 27 718-744 27-53 (147)
121 PLN02811 hydrolase 94.2 0.16 3.4E-06 52.8 8.1 32 717-748 77-108 (220)
122 PLN02940 riboflavin kinase 94.1 0.14 3E-06 57.9 8.0 40 718-757 93-133 (382)
123 TIGR02252 DREG-2 REG-2-like, H 94.1 0.2 4.3E-06 51.1 8.5 39 718-757 105-143 (203)
124 TIGR02009 PGMB-YQAB-SF beta-ph 94.0 0.14 3E-06 51.3 7.0 40 717-758 87-126 (185)
125 PLN02779 haloacid dehalogenase 93.9 0.26 5.6E-06 53.4 9.4 37 718-754 144-180 (286)
126 PRK11587 putative phosphatase; 93.9 0.21 4.6E-06 51.6 8.3 40 718-757 83-122 (218)
127 PRK09449 dUMP phosphatase; Pro 93.8 0.28 6E-06 50.9 9.1 40 718-758 95-134 (224)
128 PRK06698 bifunctional 5'-methy 93.7 0.28 6E-06 57.1 9.7 42 718-759 330-371 (459)
129 TIGR01668 YqeG_hyp_ppase HAD s 93.6 0.24 5.3E-06 49.1 7.9 40 718-757 43-83 (170)
130 smart00775 LNS2 LNS2 domain. T 93.6 0.45 9.8E-06 46.4 9.6 34 716-749 25-58 (157)
131 PRK08942 D,D-heptose 1,7-bisph 93.3 0.42 9E-06 47.9 9.1 27 718-744 29-55 (181)
132 TIGR01549 HAD-SF-IA-v1 haloaci 93.2 0.35 7.7E-06 46.8 8.3 40 716-755 62-101 (154)
133 TIGR01533 lipo_e_P4 5'-nucleot 93.0 0.64 1.4E-05 49.4 10.2 43 716-758 116-161 (266)
134 PLN02575 haloacid dehalogenase 92.9 0.41 8.9E-06 53.4 8.9 42 718-759 216-257 (381)
135 TIGR01681 HAD-SF-IIIC HAD-supe 92.7 0.31 6.7E-06 45.8 6.7 39 718-756 29-68 (128)
136 PRK05446 imidazole glycerol-ph 92.5 0.52 1.1E-05 52.2 9.1 26 717-742 29-54 (354)
137 COG3769 Predicted hydrolase (H 92.5 2.1 4.5E-05 43.1 12.1 37 722-758 27-63 (274)
138 TIGR02254 YjjG/YfnB HAD superf 92.5 0.47 1E-05 49.0 8.4 41 718-759 97-137 (224)
139 PLN02423 phosphomannomutase 92.4 1.6 3.5E-05 46.1 12.3 48 841-890 180-234 (245)
140 PLN03017 trehalose-phosphatase 92.4 4.9 0.00011 44.6 16.2 180 706-886 119-330 (366)
141 TIGR01261 hisB_Nterm histidino 92.3 0.8 1.7E-05 44.9 9.1 26 718-743 29-54 (161)
142 smart00577 CPDc catalytic doma 92.1 0.23 4.9E-06 48.0 5.0 43 715-758 42-84 (148)
143 TIGR02247 HAD-1A3-hyp Epoxide 91.9 0.34 7.3E-06 49.8 6.4 29 718-746 94-122 (211)
144 PF06888 Put_Phosphatase: Puta 90.6 1 2.2E-05 46.9 8.2 42 718-759 71-114 (234)
145 PRK09456 ?-D-glucose-1-phospha 90.4 1.1 2.4E-05 45.6 8.4 30 718-747 84-113 (199)
146 TIGR00213 GmhB_yaeD D,D-heptos 90.4 2.2 4.8E-05 42.4 10.4 27 719-745 27-53 (176)
147 KOG4383 Uncharacterized conser 89.4 2.4 5.1E-05 49.1 10.4 184 702-889 810-1021(1354)
148 TIGR01664 DNA-3'-Pase DNA 3'-p 89.4 1.4 3.1E-05 43.4 7.9 26 719-744 43-68 (166)
149 TIGR01691 enolase-ppase 2,3-di 89.2 2.7 5.9E-05 43.5 10.1 40 715-754 92-131 (220)
150 COG4030 Uncharacterized protei 89.1 1.3 2.7E-05 44.6 7.1 147 718-890 83-239 (315)
151 PLN02151 trehalose-phosphatase 88.4 13 0.00027 41.3 15.1 204 672-880 71-307 (354)
152 PHA02597 30.2 hypothetical pro 87.6 2.9 6.4E-05 42.2 9.2 39 718-757 74-112 (197)
153 TIGR01459 HAD-SF-IIA-hyp4 HAD- 86.7 2.4 5.3E-05 44.5 8.3 48 711-758 17-66 (242)
154 TIGR01686 FkbH FkbH-like domai 86.6 2 4.3E-05 47.3 7.8 37 718-754 31-67 (320)
155 TIGR01675 plant-AP plant acid 85.9 3.8 8.2E-05 42.4 8.8 30 718-747 120-149 (229)
156 PLN02645 phosphoglycolate phos 85.8 2.9 6.2E-05 45.9 8.5 47 711-757 37-86 (311)
157 COG2179 Predicted hydrolase of 84.9 3 6.6E-05 40.3 6.9 41 718-758 46-86 (175)
158 PF13344 Hydrolase_6: Haloacid 84.8 1.3 2.8E-05 39.7 4.2 51 711-761 7-60 (101)
159 PLN02919 haloacid dehalogenase 84.8 3 6.5E-05 53.5 9.1 41 718-758 161-201 (1057)
160 PF02358 Trehalose_PPase: Treh 82.4 6.8 0.00015 41.0 9.3 165 718-882 19-205 (235)
161 PRK10563 6-phosphogluconate ph 81.7 3.2 7E-05 42.8 6.5 39 717-758 87-125 (221)
162 TIGR01993 Pyr-5-nucltdase pyri 81.6 4.8 0.0001 40.2 7.5 38 718-758 84-121 (184)
163 COG0241 HisB Histidinol phosph 79.9 13 0.00029 36.9 9.6 50 836-886 87-146 (181)
164 PF09419 PGP_phosphatase: Mito 75.8 11 0.00024 37.1 7.6 43 715-757 56-107 (168)
165 TIGR01657 P-ATPase-V P-type AT 74.7 33 0.00072 44.4 13.8 21 145-165 249-271 (1054)
166 KOG4383 Uncharacterized conser 72.9 8.5 0.00018 44.8 6.8 35 144-178 162-196 (1354)
167 TIGR01458 HAD-SF-IIA-hyp3 HAD- 71.9 5.8 0.00012 42.2 5.1 48 711-758 10-64 (257)
168 TIGR01457 HAD-SF-IIA-hyp2 HAD- 71.0 8.5 0.00018 40.7 6.1 50 711-760 10-62 (249)
169 PF08235 LNS2: LNS2 (Lipin/Ned 70.7 39 0.00084 32.8 9.9 34 717-750 26-59 (157)
170 PRK10444 UMP phosphatase; Prov 70.7 4.5 9.8E-05 42.7 3.9 45 711-755 10-54 (248)
171 PRK10748 flavin mononucleotide 69.6 12 0.00025 39.3 6.8 28 718-746 113-140 (238)
172 TIGR01684 viral_ppase viral ph 68.9 7.1 0.00015 41.8 4.8 41 719-759 146-187 (301)
173 PHA03398 viral phosphatase sup 68.2 7.6 0.00016 41.6 4.8 41 719-759 148-189 (303)
174 PRK10725 fructose-1-P/6-phosph 66.6 16 0.00034 36.4 6.8 36 723-759 92-127 (188)
175 PF03767 Acid_phosphat_B: HAD 65.6 13 0.00028 38.7 6.0 29 718-746 115-143 (229)
176 COG1877 OtsB Trehalose-6-phosp 62.4 1.6E+02 0.0036 31.3 13.5 168 714-881 36-218 (266)
177 TIGR02251 HIF-SF_euk Dullard-l 62.2 7.5 0.00016 38.1 3.3 45 712-757 36-80 (162)
178 KOG3040 Predicted sugar phosph 61.7 16 0.00034 36.8 5.2 49 707-755 12-60 (262)
179 TIGR01517 ATPase-IIB_Ca plasma 60.1 16 0.00034 46.7 6.5 22 145-166 186-207 (941)
180 TIGR01493 HAD-SF-IA-v2 Haloaci 58.2 9.4 0.0002 37.6 3.3 34 718-758 90-123 (175)
181 TIGR01663 PNK-3'Pase polynucle 57.5 29 0.00063 40.8 7.5 26 719-744 198-223 (526)
182 PTZ00445 p36-lilke protein; Pr 53.9 20 0.00044 36.4 4.7 29 719-747 76-104 (219)
183 COG0637 Predicted phosphatase/ 53.8 42 0.00091 34.7 7.4 43 717-759 85-127 (221)
184 TIGR01452 PGP_euk phosphoglyco 53.6 26 0.00056 37.7 6.0 51 711-761 11-64 (279)
185 COG1011 Predicted hydrolase (H 51.8 79 0.0017 32.4 9.2 41 718-759 99-139 (229)
186 PF13380 CoA_binding_2: CoA bi 51.0 22 0.00048 32.6 4.3 38 721-758 66-104 (116)
187 PF12791 RsgI_N: Anti-sigma fa 49.6 27 0.00059 27.2 4.0 39 134-172 3-42 (56)
188 TIGR01680 Veg_Stor_Prot vegeta 48.3 1E+02 0.0022 32.8 9.1 30 717-746 144-173 (275)
189 KOG0210 P-type ATPase [Inorgan 48.2 75 0.0016 37.9 8.5 180 59-245 87-290 (1051)
190 TIGR01689 EcbF-BcbF capsule bi 46.8 18 0.00039 33.8 2.9 33 717-749 23-55 (126)
191 PLN02177 glycerol-3-phosphate 44.7 1.2E+02 0.0026 35.5 10.0 43 845-888 173-215 (497)
192 KOG3120 Predicted haloacid deh 43.8 93 0.002 31.9 7.4 41 718-758 84-125 (256)
193 COG0474 MgtA Cation transport 43.2 4.3E+02 0.0094 33.8 15.3 164 145-381 160-328 (917)
194 TIGR01647 ATPase-IIIA_H plasma 43.0 1.5E+02 0.0033 36.9 11.0 24 643-666 443-466 (755)
195 TIGR01106 ATPase-IIC_X-K sodiu 41.8 2.6E+02 0.0057 36.1 13.2 203 145-421 161-368 (997)
196 TIGR01501 MthylAspMutase methy 39.0 83 0.0018 29.7 6.1 80 653-757 24-111 (134)
197 smart00831 Cation_ATPase_N Cat 38.4 79 0.0017 25.1 5.2 40 280-319 23-62 (64)
198 COG0647 NagD Predicted sugar p 36.5 42 0.00091 35.8 4.1 47 709-755 15-61 (269)
199 TIGR01662 HAD-SF-IIIA HAD-supe 36.1 3E+02 0.0065 25.3 9.7 96 645-758 28-126 (132)
200 cd06919 Asp_decarbox Aspartate 34.6 61 0.0013 29.2 4.1 83 546-677 18-100 (111)
201 PF12148 DUF3590: Protein of u 33.5 28 0.00061 29.8 1.8 24 148-171 58-81 (85)
202 cd02071 MM_CoA_mut_B12_BD meth 33.2 1.1E+02 0.0024 28.1 6.1 81 653-758 22-104 (122)
203 TIGR00223 panD L-aspartate-alp 33.0 64 0.0014 29.8 4.1 85 545-678 18-102 (126)
204 TIGR02250 FCP1_euk FCP1-like p 32.7 67 0.0015 31.2 4.6 45 713-758 53-97 (156)
205 PRK05449 aspartate alpha-decar 32.2 70 0.0015 29.6 4.2 85 545-678 18-102 (126)
206 PF13253 DUF4044: Protein of u 31.7 1.6E+02 0.0035 20.7 4.9 19 288-306 3-21 (35)
207 PRK08508 biotin synthase; Prov 31.7 5.4E+02 0.012 27.5 11.9 45 723-767 101-161 (279)
208 PF12689 Acid_PPase: Acid Phos 31.3 79 0.0017 31.2 4.9 41 718-758 45-86 (169)
209 PF12710 HAD: haloacid dehalog 30.4 23 0.00051 35.2 1.0 15 418-432 1-15 (192)
210 PRK10444 UMP phosphatase; Prov 30.0 3.5E+02 0.0076 28.4 9.9 24 861-884 191-215 (248)
211 COG1188 Ribosome-associated he 28.9 68 0.0015 28.4 3.4 44 130-178 27-70 (100)
212 cd02067 B12-binding B12 bindin 28.6 1.7E+02 0.0038 26.5 6.5 81 652-757 21-103 (119)
213 PTZ00413 lipoate synthase; Pro 26.6 3.6E+02 0.0078 30.3 9.2 54 704-757 191-253 (398)
214 TIGR01460 HAD-SF-IIA Haloacid 25.6 1.2E+02 0.0026 31.6 5.4 47 711-757 7-57 (236)
215 PF03120 DNA_ligase_OB: NAD-de 24.8 37 0.00081 29.0 1.1 27 151-177 45-72 (82)
216 TIGR00676 fadh2 5,10-methylene 23.9 2.9E+02 0.0062 29.6 8.0 83 644-745 14-98 (272)
217 TIGR01522 ATPase-IIA2_Ca golgi 23.7 4.1E+02 0.009 33.8 10.6 26 643-668 529-554 (884)
218 PF02261 Asp_decarbox: Asparta 23.4 46 0.001 30.2 1.5 84 547-679 20-103 (116)
219 PRK09545 znuA high-affinity zi 23.3 4.3E+02 0.0092 28.9 9.3 52 706-757 221-276 (311)
220 PF09926 DUF2158: Uncharacteri 23.3 50 0.0011 25.6 1.5 13 157-169 2-14 (53)
221 PRK04980 hypothetical protein; 23.0 1.4E+02 0.003 26.7 4.3 53 153-205 29-84 (102)
222 COG2503 Predicted secreted aci 22.9 4.7E+02 0.01 27.4 8.6 29 719-747 123-151 (274)
223 TIGR01454 AHBA_synth_RP 3-amin 22.7 6.2E+02 0.013 25.2 10.0 39 719-758 130-170 (205)
224 PF02219 MTHFR: Methylenetetra 22.3 2.2E+02 0.0048 30.7 6.8 44 704-747 68-112 (287)
225 TIGR01652 ATPase-Plipid phosph 21.7 1.1E+03 0.024 30.7 14.1 171 73-245 23-215 (1057)
226 TIGR01458 HAD-SF-IIA-hyp3 HAD- 21.7 9.5E+02 0.021 25.2 13.9 73 647-748 26-99 (257)
227 TIGR03351 PhnX-like phosphonat 21.4 5.6E+02 0.012 25.9 9.5 38 720-758 145-185 (220)
228 cd01137 PsaA Metal binding pro 21.3 3.5E+02 0.0077 29.1 8.1 53 706-758 195-251 (287)
229 cd01019 ZnuA Zinc binding prot 21.3 4.9E+02 0.011 28.0 9.2 52 706-757 197-252 (286)
230 cd03409 Chelatase_Class_II Cla 21.0 2E+02 0.0043 25.1 5.1 28 712-739 36-64 (101)
231 TIGR02244 HAD-IG-Ncltidse HAD 20.7 1.3E+02 0.0029 33.3 4.7 37 720-756 186-223 (343)
232 TIGR02826 RNR_activ_nrdG3 anae 20.6 1.4E+02 0.0031 28.7 4.3 37 708-745 63-99 (147)
233 cd01017 AdcA Metal binding pro 20.6 4.3E+02 0.0093 28.3 8.7 52 706-757 189-244 (282)
234 PRK15122 magnesium-transportin 20.6 2.5E+02 0.0055 35.7 7.8 119 72-197 69-197 (903)
235 PRK11507 ribosome-associated p 20.5 96 0.0021 25.6 2.6 23 144-166 41-63 (70)
236 PF00690 Cation_ATPase_N: Cati 20.5 1.1E+02 0.0025 24.7 3.2 37 280-316 33-69 (69)
237 TIGR00640 acid_CoA_mut_C methy 20.2 2.4E+02 0.0051 26.5 5.6 82 652-758 24-107 (132)
No 1
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=3.6e-158 Score=1401.10 Aligned_cols=814 Identities=60% Similarity=0.986 Sum_probs=735.6
Q ss_pred CCCceEEEeCCCCcCCcCCCCCCCceeeccccchhhhhHHHHHHHhhhHHHHHHHHHHHHhcccCCCCCCcccccchhhh
Q 002656 33 QGCPRVIYCNQPHMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIV 112 (896)
Q Consensus 33 ~~~~r~~~~~~~~~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~~f~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~v 112 (896)
++.+|++++|+|..+..+..+|..|+|+|+||++++|||++||+||+|++|+|||++++++++|++|++++++++||++|
T Consensus 11 ~~~~R~~~~n~~~~~~~~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip~~~~~~~~~~~pl~~v 90 (1151)
T KOG0206|consen 11 PGFSRVVYCNDPLPFEAPQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIPLSPFNPYTTLVPLLFV 90 (1151)
T ss_pred CCCceEEeCCCCCcchhhhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCcccccCccceeeceeee
Confidence 46689999999965555667999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHhcchhhhccceEEEEeCCCeEEEeecccCccCcEEEeccCCcCCceEEEEeecCCCceEEEEecc
Q 002656 113 VGVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMN 192 (896)
Q Consensus 113 l~i~~~~~~~~d~~r~k~~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~~lL~ss~~~G~~~Vdes~ 192 (896)
+.++++|+++|||+|+++|+++|+++|.|+++++.+++..|++|+|||+|++..++.+|||++||+||+++|.|||+|++
T Consensus 91 l~~t~iKd~~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~n 170 (1151)
T KOG0206|consen 91 LGITAIKDAIEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETAN 170 (1151)
T ss_pred ehHHHHHHHHhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEee
Confidence 99999999999999999999999999999954445999999999999999999999999999999999999999999999
Q ss_pred CCCCCcceeecccccCCCCCchhhhccceEEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeeccceeecCCeEEEEEE
Q 002656 193 LDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVI 272 (896)
Q Consensus 193 LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~g~Vi 272 (896)
||||||+|.|++...+......+.+..+.+.|+||+||+++|.|.|++...++..|++++|+|+|||+|+||+|++|+|+
T Consensus 171 LDGEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv 250 (1151)
T KOG0206|consen 171 LDGETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVV 250 (1151)
T ss_pred cCCccccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEE
Confidence 99999999999988887754556677899999999999999999999998887779999999999999999999999999
Q ss_pred EeccccceeeccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCC---CccccCCCCCCcccCCCCCc
Q 002656 273 FTGHDSKVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTP---QWWYLKPKETDVYFNPGKPL 349 (896)
Q Consensus 273 ~tG~~Tk~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~ii~~~i~~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 349 (896)
+||++||+|+|+..++.|+|.+++.+|+.+..++++++++|+++++...+|...... .+||+..+. +.
T Consensus 251 ~tG~dtK~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~---------~~ 321 (1151)
T KOG0206|consen 251 FTGHDTKLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSE---------AA 321 (1151)
T ss_pred EcCCcchHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCch---------HH
Confidence 999999999999999999999999999999999999999999999999999874432 367764421 34
Q ss_pred hhHHHHHHHHHHHhccccccchhhhHHHHHHHHHHHHhhccccccCCCCCCceeecccccccccceeEEEecCCCccccc
Q 002656 350 VPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCN 429 (896)
Q Consensus 350 ~~~~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n 429 (896)
...+..|++++++|..++|+|||+++++++++|+.++++|.+||+++.+.++.+|+++++|+||+|++|++|||||||+|
T Consensus 322 ~~~~~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N 401 (1151)
T KOG0206|consen 322 YAGFVHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQN 401 (1151)
T ss_pred HHHHHHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccc
Confidence 46678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhcccccCCCCccccccccccCCCCccccccCCCccccccc
Q 002656 430 QMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRL 509 (896)
Q Consensus 430 ~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (896)
.|+|++|+++|..|+...++.+.....+... + ... ...+++.|.|+++
T Consensus 402 ~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~------------------------------~-~~~-~~~~~~~f~~~~~ 449 (1151)
T KOG0206|consen 402 SMEFKKCSINGTSYGRNVTEVEAALAKRSGG------------------------------D-VNE-HKIKGFTFEDSRL 449 (1151)
T ss_pred eeeeecccccCcccccCCChhhcccCccccc------------------------------c-ccc-cccccceeccchh
Confidence 9999999999999999876543221110000 0 011 3456789999999
Q ss_pred cccCCCCCCChHHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCC
Q 002656 510 MDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQ 589 (896)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~ 589 (896)
+++.+...++.....+|++++|+||++.++.+++.+.+.|+++||||.||+++|+++|+.|..|++..+.+...+
T Consensus 450 ~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g----- 524 (1151)
T KOG0206|consen 450 VDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELG----- 524 (1151)
T ss_pred hccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccc-----
Confidence 999988888899999999999999999999876666899999999999999999999999999999999998433
Q ss_pred CceeEEEEeeeecCCCCCeeEEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeC
Q 002656 590 PVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQL 669 (896)
Q Consensus 590 ~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~k~l 669 (896)
...+|++|+++||+|.|||||||||+|+|++.|||||||++|++++..+++.+.+.+.+|+++|+.+|+||||+|||++
T Consensus 525 -~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l 603 (1151)
T KOG0206|consen 525 -VEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYREL 603 (1151)
T ss_pred -cceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhcc
Confidence 3689999999999999999999999999999999999999999999988888999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHhhhcccEEEEeeeeccccCCChHHHHHHHHHcCCeEEEEcCCcHHHHH
Q 002656 670 DESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAI 749 (896)
Q Consensus 670 ~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~ 749 (896)
+++||.+|+++|.+|++++ .||+++++++++.+|+||+++|++||||+||+|||++|+.|++||||+||||||++|||+
T Consensus 604 ~e~eY~~w~~~~~~A~ts~-~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAi 682 (1151)
T KOG0206|consen 604 DEEEYEEWNERYNEAKTSL-TDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAI 682 (1151)
T ss_pred CHHHHHHHHHHHHHHHhhc-cCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHH
Confidence 9999999999999999999 699999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccccCceEEEEecCCchhhHHHHH-HHHHHHHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcchhHHHH
Q 002656 750 NIGFACSLLRQGMKQICITALNSDSVGKAAK-EAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHH 828 (896)
Q Consensus 750 ~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~ 828 (896)
+||++|++++++|+++.++..+.+....... ..+.+.+..+.............. ..++|||||++|.++++++.+.+
T Consensus 683 NIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~aLVIDGktl~~aL~~~~~~~ 761 (1151)
T KOG0206|consen 683 NIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSE-KPFALVIDGKTLAYALEDELRKK 761 (1151)
T ss_pred HHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCc-CCceEEEECHHHHhhhCchhhHH
Confidence 9999999999999999999877541111110 123334433333222222221112 47999999999999999999999
Q ss_pred HHHHhhhcCceEEEeCCcccHHHHHHHHhccCCCEEEEEcCChhhHHHHHHCCccEEEeCccccccC
Q 002656 829 FLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQVG 895 (896)
Q Consensus 829 ~~~l~~~~~~vv~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~~L~~AdVGI~isg~eg~qaa 895 (896)
|+.++..|++|||||++|.||+.+|+++++..+.+||+||||+||++|||+|||||||+|.||+||+
T Consensus 762 Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAv 828 (1151)
T KOG0206|consen 762 FLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAV 828 (1151)
T ss_pred HHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhh
Confidence 9999999999999999999999999999977899999999999999999999999999999999997
No 2
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=1e-144 Score=1335.67 Aligned_cols=817 Identities=38% Similarity=0.603 Sum_probs=682.8
Q ss_pred CceEEEeCCCCcCCcCCCCCCCceeeccccchhhhhHHHHHHHhhhHHHHHHHHHHHHhccc-CCCCCCcccccchhhhh
Q 002656 35 CPRVIYCNQPHMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP-LSPFSPVSMLLPLAIVV 113 (896)
Q Consensus 35 ~~r~~~~~~~~~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~~f~~~~n~~~l~~~il~~~~-~~~~~~~~~~~~l~~vl 113 (896)
..|.|++|++.. .+.+.+|++|.|+|+||++|+|||++||+||+|++|+|||+++++|++| +++.+++++++||++++
T Consensus 69 ~~r~i~~~~~~~-~~~~~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~~t~~~PL~~vl 147 (1178)
T PLN03190 69 DARLVYLNDPEK-SNERFEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGASILPLAFVL 147 (1178)
T ss_pred CceEEEcCCCCc-ccccccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCcchHHHHHHHHH
Confidence 479999999842 2234579999999999999999999999999999999999999999999 89999999999999999
Q ss_pred hHHHHHHHHHHHHHhcchhhhccceEEEEeCCCeEEEeecccCccCcEEEeccCCcCCceEEEEeecCCCceEEEEeccC
Q 002656 114 GVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNL 193 (896)
Q Consensus 114 ~i~~~~~~~~d~~r~k~~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~~lL~ss~~~G~~~Vdes~L 193 (896)
+++++++++||++|+++|+.+|+++++|+ ++|.+++++|++|+|||||+|++||.||||++||+|++++|.|+|||++|
T Consensus 148 ~v~~ike~~Ed~~r~k~d~~~N~~~~~v~-~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~L 226 (1178)
T PLN03190 148 LVTAVKDAYEDWRRHRSDRIENNRLAWVL-VDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINL 226 (1178)
T ss_pred HHHHHHHHHHHHHHHHhHHhhcCcEEEEE-ECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEcccc
Confidence 99999999999999999999999999999 89999999999999999999999999999999999999999999999999
Q ss_pred CCCCcceeecccccCCCCCchhhhccceEEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeeccceeecCCeEEEEEEE
Q 002656 194 DGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIF 273 (896)
Q Consensus 194 tGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~g~Vi~ 273 (896)
||||+|+.|.+++.+.... .....+.|.|+||.||+++|.|.|++.++|+..+++.+|+|+|||.|+||+|++|+|+|
T Consensus 227 dGEt~~k~k~~~~~~~~~~--~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVY 304 (1178)
T PLN03190 227 DGESNLKTRYAKQETLSKI--PEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVY 304 (1178)
T ss_pred CCeeeeeEecccchhhhcc--hhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEE
Confidence 9999999999887653211 22345789999999999999999999999999999999999999999999999999999
Q ss_pred eccccceeeccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCCcccCC-------C
Q 002656 274 TGHDSKVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNP-------G 346 (896)
Q Consensus 274 tG~~Tk~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~ii~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 346 (896)
||+|||+++|...++.|+|++|+.+|+++.+++++++++|++++++..+|........||+.+.....+... .
T Consensus 305 TG~dTK~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 384 (1178)
T PLN03190 305 CGRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYY 384 (1178)
T ss_pred echhhhHhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999887775433334555432110000000 0
Q ss_pred CCchhHHHHHHHHHHHhccccccchhhhHHHHHHHHHHHHhhccccccCCCCCCceeecccccccccceeEEEecCCCcc
Q 002656 347 KPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTL 426 (896)
Q Consensus 347 ~~~~~~~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTL 426 (896)
......+..|+.+++++..+||++|++++++++++|+++|.+|.+||++..+.++.||+++++|+||+|+|||+||||||
T Consensus 385 ~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTL 464 (1178)
T PLN03190 385 GWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTL 464 (1178)
T ss_pred hhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCcc
Confidence 00123356788889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhcccccCCCCccccccccccCCCCccccccCCCcccc
Q 002656 427 TCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFED 506 (896)
Q Consensus 427 T~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (896)
|+|+|+|++|+++|..|+.+....+..... .. ....+ .. ...+...+.+
T Consensus 465 T~N~M~fk~~~i~g~~y~~~~~~~~~~~~~---~~-------------------~~~~~-------~~--~~~~~~~~~~ 513 (1178)
T PLN03190 465 TENKMEFQCASIWGVDYSDGRTPTQNDHAG---YS-------------------VEVDG-------KI--LRPKMKVKVD 513 (1178)
T ss_pred ccceEEEEEEEECCEEcccccccchhhhhc---cc-------------------ccccc-------cc--ccccccccCC
Confidence 999999999999999997542211000000 00 00000 00 0000000011
Q ss_pred ccccccCC--CCCCChHHHHHHHHHHhhcceeeecccCC--C---CceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEE
Q 002656 507 SRLMDGNW--LKEPNVDTLLLFFRILAICHTAIPELNEE--T---GNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVF 579 (896)
Q Consensus 507 ~~~~~~~~--~~~~~~~~~~~~~~~la~C~~~~~~~~~~--~---~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~ 579 (896)
..+.+... ...+....+.+|+.++++||++.+...++ . +.+.|+++||||.||+++|+.+|+.+..|+++.+.
T Consensus 514 ~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~ 593 (1178)
T PLN03190 514 PQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIV 593 (1178)
T ss_pred HHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEE
Confidence 11111100 01122345778999999999999853211 1 24679999999999999999999999999999988
Q ss_pred EEecCCCCCCCceeEEEEeeeecCCCCCeeEEEEEEcCCCcEEEEEcccchhhhHhhhcc-ccccHHHHHHHHHHHHhcC
Q 002656 580 IRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKN-GRMYEEATTKLLNEYGEAG 658 (896)
Q Consensus 580 i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~G 658 (896)
+...+ ....|++++++||+|+|||||||++++++.+++||||||++|+++|... +...++.+.+++++|+.+|
T Consensus 594 i~~~~------~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~G 667 (1178)
T PLN03190 594 IDIHG------ERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLG 667 (1178)
T ss_pred Eeecc------ceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcC
Confidence 76543 2678999999999999999999999999999999999999999999753 3346788899999999999
Q ss_pred CeEEEEEEEeCCHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHhhhcccEEEEeeeeccccCCChHHHHHHHHHcCCeEE
Q 002656 659 LRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIW 738 (896)
Q Consensus 659 ~r~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~aGIkv~ 738 (896)
+|||++|||+++++|+.+|.++|.+|+.++ .+|++.++++++.+|+||+++|+++++|+||++++++|+.|++|||+||
T Consensus 668 lRtL~lA~k~l~~~e~~~~~~~~~~a~~~~-~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~ 746 (1178)
T PLN03190 668 LRTLVVGMRELNDSEFEQWHFSFEAASTAL-IGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVW 746 (1178)
T ss_pred CceEEEEEEeCCHHHHhhHHHHHHHhhhhh-hhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEE
Confidence 999999999999999999999999999999 8999999999999999999999999999999999999999999999999
Q ss_pred EEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhh---hhh-hhccCCCCCceEEEEeC
Q 002656 739 VLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNA---SQM-IKLERDPHAAYALIIEG 814 (896)
Q Consensus 739 mlTGD~~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~lvi~G 814 (896)
|+|||+.+||++||++|||++++++.+.++..+.+............. ...... .+. ..........+++||+|
T Consensus 747 mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG 824 (1178)
T PLN03190 747 VLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMS--KKLTTVSGISQNTGGSSAAASDPVALIIDG 824 (1178)
T ss_pred EECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhh--hhccccccccccccccccccCCceEEEEEc
Confidence 999999999999999999999999888887765443222211111000 000000 000 00111234568899999
Q ss_pred chhhhhcchhHHHHHHHHhhhcCceEEEeCCcccHHHHHHHHhccCCCEEEEEcCChhhHHHHHHCCccEEEeCcccccc
Q 002656 815 KTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQV 894 (896)
Q Consensus 815 ~~l~~~l~~~~~~~~~~l~~~~~~vv~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~~L~~AdVGI~isg~eg~qa 894 (896)
.+|..++++++.++|.+++..|++|||||++|.||++||+++|+..+++|+|||||+||++|||+|||||||+|+||+||
T Consensus 825 ~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA 904 (1178)
T PLN03190 825 TSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQA 904 (1178)
T ss_pred HHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHH
Confidence 99999998888899999999999999999999999999999998446899999999999999999999999999999999
Q ss_pred C
Q 002656 895 G 895 (896)
Q Consensus 895 a 895 (896)
+
T Consensus 905 ~ 905 (1178)
T PLN03190 905 V 905 (1178)
T ss_pred H
Confidence 6
No 3
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=9.2e-137 Score=1281.38 Aligned_cols=798 Identities=51% Similarity=0.847 Sum_probs=678.3
Q ss_pred CCCceeeccccchhhhhHHHHHHHhhhHHHHHHHHHHHHhccc-CCCCCCcccccchhhhhhHHHHHHHHHHHHHhcchh
Q 002656 54 YCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP-LSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDK 132 (896)
Q Consensus 54 ~g~N~i~~~k~~~~~flp~~l~~~f~~~~n~~~l~~~il~~~~-~~~~~~~~~~~~l~~vl~i~~~~~~~~d~~r~k~~~ 132 (896)
|++|.|.|+||++|+|+|++||+||+|++|+|||+++++|++| +++.+++++++||+++++++++++++||++|+++|+
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~ 80 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDK 80 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 7899999999999999999999999999999999999999999 888999999999999999999999999999999999
Q ss_pred hhccceEEEEeCC-CeEEEeecccCccCcEEEeccCCcCCceEEEEeecCCCceEEEEeccCCCCCcceeecccccCCCC
Q 002656 133 EVNARKVSVHVGN-GVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPL 211 (896)
Q Consensus 133 ~~n~~~~~V~~r~-g~~~~i~~~~L~vGDII~l~~ge~vPaD~~lL~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~ 211 (896)
.+|+++|+|+ |+ |++++++|++|+|||||+|++||.||||++||+|++++|.|+||||+|||||+|+.|++...+...
T Consensus 81 ~~n~~~~~v~-~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~~ 159 (1057)
T TIGR01652 81 EVNNRLTEVL-EGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKM 159 (1057)
T ss_pred HHhCcEEEEE-CCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchhhhcc
Confidence 9999999999 75 899999999999999999999999999999999999999999999999999999999988766544
Q ss_pred CchhhhccceEEEEeeCCCCCceeEEEEEEECC-eeeecCCCCeeeccceeecCCeEEEEEEEeccccceeeccCCCCCC
Q 002656 212 NEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDR-ELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSK 290 (896)
Q Consensus 212 ~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g-~~~~l~~~n~l~rgs~l~nt~~~~g~Vi~tG~~Tk~~~~~~~~~~k 290 (896)
...+.+..++|.|+|+.||++++.|.|++.+++ ...|++.+|+++|||.++||||++|+|+|||++|+++++....+.|
T Consensus 160 ~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~~~~~k 239 (1057)
T TIGR01652 160 LDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQAPSK 239 (1057)
T ss_pred CChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCCCCccc
Confidence 445566678999999999999999999999988 7789999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCCcccCCCCCchhHHHHHHHHHHHhccccccc
Q 002656 291 RSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPIS 370 (896)
Q Consensus 291 ~s~l~~~~~~~~~~~~~~~ii~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~ 370 (896)
+|++|+.+|+++.+++++++++|++++++..+|........||+..+.. ........+..|++++++++.+||++
T Consensus 240 ~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~-----~~~~~~~~~~~~~~~~~L~~~~IPis 314 (1057)
T TIGR01652 240 RSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVS-----ERNAAANGFFSFLTFLILFSSLIPIS 314 (1057)
T ss_pred ccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcc-----cccchhHHHHHHHHHHHHHhhhccee
Confidence 9999999999999999999999999999887776544344788753221 12223445668999999999999999
Q ss_pred hhhhHHHHHHHHHHHHhhccccccCCCCCCceeecccccccccceeEEEecCCCcccccceEEEEEEEcCeeccCCchHH
Q 002656 371 LYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEV 450 (896)
Q Consensus 371 L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~ 450 (896)
|++++++++++++.++++|.+||++...+++.+|+++++|+||+|++||+|||||||+|+|+|++|+++|..|+...++.
T Consensus 315 L~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~ 394 (1057)
T TIGR01652 315 LYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEI 394 (1057)
T ss_pred eeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchH
Confidence 99999999999999999999999887788999999999999999999999999999999999999999999998654432
Q ss_pred HHHHHHhhhhchhhhhhhhhcccccCCCCccccccccccCCCCccccccCCCccccccccccCCCCCCChHHHHHHHHHH
Q 002656 451 ELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRIL 530 (896)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 530 (896)
........+...+ . ........+..++.++.+.+......+....+.+|+.++
T Consensus 395 ~~~~~~~~~~~~~---------------~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 447 (1057)
T TIGR01652 395 KDAIRERLGSYVE---------------N------------ENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLAL 447 (1057)
T ss_pred HHHhhhccccccc---------------c------------cccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHH
Confidence 1111100000000 0 000000001123444443332222233445678899999
Q ss_pred hhcceeeecc-cCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEeeeecCCCCCee
Q 002656 531 AICHTAIPEL-NEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKR 609 (896)
Q Consensus 531 a~C~~~~~~~-~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkr 609 (896)
++||++.+.. +++...+.|+++||+|.||+++|+.+|+.+.+|+.+.+.+.... .| ....|++++.+||+|+|||
T Consensus 448 ~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~--~~--~~~~~~il~~~pF~s~rKr 523 (1057)
T TIGR01652 448 ALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEM--HG--ETKEYEILNVLEFNSDRKR 523 (1057)
T ss_pred HhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEe--CC--CEEEEEEEEecccCCCCCe
Confidence 9999999875 22234588999999999999999999999999988744433211 12 2578999999999999999
Q ss_pred EEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhc
Q 002656 610 MSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIG 689 (896)
Q Consensus 610 msviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~k~l~~~e~~~~~~~~~~a~~~~~ 689 (896)
|||||+++++++++|+||||++|+++|...++..++.+.+++++|+.+|+|||++|||.++++|+.+|.++|.+|+.++
T Consensus 524 mSviv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~- 602 (1057)
T TIGR01652 524 MSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTAL- 602 (1057)
T ss_pred EEEEEEeCCCeEEEEEeCcHHHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhh-
Confidence 9999999888999999999999999998655556788899999999999999999999999999999999999999998
Q ss_pred cCHHHHHHHHHHhhhcccEEEEeeeeccccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEec
Q 002656 690 ADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITA 769 (896)
Q Consensus 690 ~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~~~~~~~~i~~ 769 (896)
.+|++.++..++.+|+||+|+|++++|||||+||+++|+.|++|||||||+|||+++||++||++|||++++.+.+.+++
T Consensus 603 ~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~ 682 (1057)
T TIGR01652 603 TDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITS 682 (1057)
T ss_pred hhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEec
Confidence 79999999999999999999999999999999999999999999999999999999999999999999998888888887
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcchhHHHHHHHHhhhcCceEEEeCCcccH
Q 002656 770 LNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQK 849 (896)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vv~~r~sP~qK 849 (896)
.+.+..... .+.+..++........ ......+++++|+|++|+.+++++++.+|.+++..|+++||||++|+||
T Consensus 683 ~~~~~~~~~-----~~~i~~~~~~~~~~~~-~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK 756 (1057)
T TIGR01652 683 ESLDATRSV-----EAAIKFGLEGTSEEFN-NLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQK 756 (1057)
T ss_pred CchhhhHHH-----HHHHHHHHHHHHHhhh-hhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHH
Confidence 654422111 1111111111111111 1123467899999999999998888889999999999999999999999
Q ss_pred HHHHHHHhccCCCEEEEEcCChhhHHHHHHCCccEEEeCccccccC
Q 002656 850 ALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQVG 895 (896)
Q Consensus 850 ~~iV~~lk~~~g~~vl~iGDG~ND~~~L~~AdVGI~isg~eg~qaa 895 (896)
++||+++|+..|++|+|||||+||++||++|||||||+|+||+||+
T Consensus 757 ~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~ 802 (1057)
T TIGR01652 757 ADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAV 802 (1057)
T ss_pred HHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEecChHHHHHH
Confidence 9999999983499999999999999999999999999999988764
No 4
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.8e-126 Score=1026.46 Aligned_cols=747 Identities=34% Similarity=0.553 Sum_probs=655.3
Q ss_pred ceEEEeCCCCcCCcCCCCCCCceeeccccchhhhhHHHHHHHhhhHHHHHHHHHHHHhccc-CCCCCCcccccchhhhhh
Q 002656 36 PRVIYCNQPHMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP-LSPFSPVSMLLPLAIVVG 114 (896)
Q Consensus 36 ~r~~~~~~~~~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~~f~~~~n~~~l~~~il~~~~-~~~~~~~~~~~~l~~vl~ 114 (896)
.|++...... ..++.+|++|.++..||++++|+|..|++||+.+.|+|||+.++.|++| +......+++.||.|+++
T Consensus 63 ~rt~~~~~~~--~~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~ 140 (1051)
T KOG0210|consen 63 GRTVNISFGP--HYRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLT 140 (1051)
T ss_pred CceeecccCC--CcccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHH
Confidence 3666655543 3366789999999999999999999999999999999999999999999 666778899999999999
Q ss_pred HHHHHHHHHHHHHhcchhhhccceEEEEeCCCeEEEeecccCccCcEEEeccCCcCCceEEEEeecCCCceEEEEeccCC
Q 002656 115 VSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLD 194 (896)
Q Consensus 115 i~~~~~~~~d~~r~k~~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~~lL~ss~~~G~~~Vdes~Lt 194 (896)
+++++++++|++|++.|+..|+.+++++.|+|...+ ++++|+|||+|++++|++||||+++|.+|+..|.|+|-|..||
T Consensus 141 itl~keavdd~~r~~rd~~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLD 219 (1051)
T KOG0210|consen 141 ITLIKEAVDDLKRRRRDRELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLD 219 (1051)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccC
Confidence 999999999999999999999999999988876555 9999999999999999999999999999999999999999999
Q ss_pred CCCcceeecccccCCCCCchhhhccceEEEEeeCCCCCceeEEEEEEECC--eeeecCCCCeeeccceeecCCeEEEEEE
Q 002656 195 GETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDR--ELYAIDPSQILLRDSKLRNTAHVYGSVI 272 (896)
Q Consensus 195 GEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g--~~~~l~~~n~l~rgs~l~nt~~~~g~Vi 272 (896)
|||.+|.|-|.+.++.+..+..+..++ +..|.|+.+++.|.||+.+.. +..+|+.+|.||.++.+.. +.++|+|+
T Consensus 220 GETDWKLrl~vp~tQ~l~~~~el~~i~--v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs-~t~~gvVv 296 (1051)
T KOG0210|consen 220 GETDWKLRLPVPRTQHLTEDSELMEIS--VYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVAS-GTAIGVVV 296 (1051)
T ss_pred CcccceeeccchhhccCCcccchheEE--EeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEec-CcEEEEEE
Confidence 999999999999998888887777666 899999999999999999943 3579999999999999985 44999999
Q ss_pred EeccccceeeccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCCcccCCCCCchhH
Q 002656 273 FTGHDSKVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPG 352 (896)
Q Consensus 273 ~tG~~Tk~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~ii~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (896)
|||.||+.++|...++.|-.-++..+|-+..++++++++++++....-++. ..||
T Consensus 297 YTG~dtRsvMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~~------~~wy------------------- 351 (1051)
T KOG0210|consen 297 YTGRDTRSVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGFG------SDWY------------------- 351 (1051)
T ss_pred EecccHHHHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcCC------CchH-------------------
Confidence 999999999999999999999999999999999999999888776654442 3688
Q ss_pred HHHHHHHHHHhccccccchhhhHHHHHHHHHHHHhhccccccCCCCCCceeecccccccccceeEEEecCCCcccccceE
Q 002656 353 LAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMD 432 (896)
Q Consensus 353 ~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~ 432 (896)
..+++++++++.+||++|-+.+++++.+.+..+.+|.+. .+..+|++++.|+||+|+|+++|||||||+|+|.
T Consensus 352 -i~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~I------pgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~ 424 (1051)
T KOG0210|consen 352 -IYIIRFLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNI------PGTVVRSSTIPEELGRISYLLTDKTGTLTQNEME 424 (1051)
T ss_pred -HHHHHHHHHHhhhceeEEEEehhHHHhhHhhhcccCCCC------CceeeecCCChHHhcceEEEEecCcCccccchhe
Confidence 578999999999999999999999999999999888755 6789999999999999999999999999999999
Q ss_pred EEEEEEcCeeccCCch-HHHHHHHHhhhhchhhhhhhhhcccccCCCCccccccccccCCCCccccccCCCccccccccc
Q 002656 433 FLKCSVAGTAYGVSPS-EVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMD 511 (896)
Q Consensus 433 ~~~~~i~~~~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (896)
|++++.|-..|+.+.. +++.......... .+ ..+..-
T Consensus 425 ~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~-------------~~---------------------~~~~~~-------- 462 (1051)
T KOG0210|consen 425 FKKIHLGTVAYSAETMDEVSQHIQSLYTPG-------------RN---------------------KGKGAL-------- 462 (1051)
T ss_pred eeeeeeeeeeccHhHHHHHHHHHHHhhCCC-------------cc---------------------cccccc--------
Confidence 9999999999976543 2222221110000 00 000000
Q ss_pred cCCCCCCChHHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCc
Q 002656 512 GNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPV 591 (896)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~ 591 (896)
.....+.+..+++...++|+||++.|..++ .+...|++.||||.||+++....|..+..|+...+.++.... .
T Consensus 463 -~~~k~~~s~rv~~~V~alalCHNVTPv~e~-~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~-----~ 535 (1051)
T KOG0210|consen 463 -SRVKKDMSARVRNAVLALALCHNVTPVFED-DGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLD-----D 535 (1051)
T ss_pred -hhhcCcccHHHHHHHHHHHHhccCCcccCC-CceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCC-----c
Confidence 001123445778899999999999998765 468999999999999999999999999999999999876532 3
Q ss_pred eeEEEEeeeecCCCCCeeEEEEEEcC-CCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeCC
Q 002656 592 EREFKILNLLDFTSKRKRMSVIVRDE-DGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLD 670 (896)
Q Consensus 592 ~~~~~il~~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~k~l~ 670 (896)
...|+||.+|||+|++|||.+|||++ .+++..|.||||.+|......+ +++++....++.+|+|||++|+|.|+
T Consensus 536 ~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~N-----dWleEE~gNMAREGLRtLVvakK~Ls 610 (1051)
T KOG0210|consen 536 ELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQYN-----DWLEEECGNMAREGLRTLVVAKKVLS 610 (1051)
T ss_pred ceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccccc-----hhhhhhhhhhhhhcceEEEEEecccC
Confidence 68999999999999999999999996 6899999999999998877644 57888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccCHHHHHHHHHH-hhhcccEEEEeeeeccccCCChHHHHHHHHHcCCeEEEEcCCcHHHHH
Q 002656 671 ESEYSAWNSEFQKAKSSIGADREATLEHVSD-MMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAI 749 (896)
Q Consensus 671 ~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~-~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~ 749 (896)
++||+.|.+.|+.|+-++ .||++++..+-+ .+|+||+++|++|+||+||++|+.+++.||+|||||||||||+.|||+
T Consensus 611 ~~eye~Fe~~y~~A~lSi-~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ 689 (1051)
T KOG0210|consen 611 EEEYEAFEEAYNAAKLSI-SDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAI 689 (1051)
T ss_pred HHHHHHHHHHHHhhhCcc-chHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhhee
Confidence 999999999999999999 899999999887 999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcchhHHHHH
Q 002656 750 NIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHF 829 (896)
Q Consensus 750 ~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~ 829 (896)
.||++.+|+..++.+..+......+....... .+ ......+|||+|++|+.+++ ..+++|
T Consensus 690 ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~---------------~l----R~k~~~aLvi~G~Sl~~cl~-yye~Ef 749 (1051)
T KOG0210|consen 690 CIAKSSRLFSRGQYIHVIRSVTSRGDAHNELN---------------NL----RRKTDCALVIDGESLEFCLK-YYEDEF 749 (1051)
T ss_pred eeehhccceecCceEEEEEecCCchHHHHHHH---------------Hh----hcCCCcEEEEcCchHHHHHH-HHHHHH
Confidence 99999999999888877776654322111110 11 13466799999999998874 678899
Q ss_pred HHHhhhcCceEEEeCCcccHHHHHHHHhccCCCEEEEEcCChhhHHHHHHCCccEEEeCccccccC
Q 002656 830 LGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQVG 895 (896)
Q Consensus 830 ~~l~~~~~~vv~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~~L~~AdVGI~isg~eg~qaa 895 (896)
.++.+.|.+|||||++|.|||++++++|+++|+.|++||||.||++|||+||+||||-|+||.||+
T Consensus 750 ~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQAS 815 (1051)
T KOG0210|consen 750 IELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQAS 815 (1051)
T ss_pred HHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccc
Confidence 999999999999999999999999999998999999999999999999999999999999999985
No 5
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-99 Score=926.04 Aligned_cols=609 Identities=31% Similarity=0.448 Sum_probs=497.7
Q ss_pred CCcCCCCCCCceeeccccchhhhhHHHHHHHhhhHHHHHHHHHHHHhccc--CCCCCCcccccchhhhhhHHHHHHHHHH
Q 002656 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP--LSPFSPVSMLLPLAIVVGVSMAKEALED 124 (896)
Q Consensus 47 ~~~~~~~~g~N~i~~~k~~~~~flp~~l~~~f~~~~n~~~l~~~il~~~~--~~~~~~~~~~~~l~~vl~i~~~~~~~~d 124 (896)
...|+..||.|.+...+...+. +.++.||..++.+.++++++++++. +.+.. .....++++++++++..++++
T Consensus 50 ~~~r~~~~G~N~~~~~~~~~~~---~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~--~~~~~I~~~i~~n~~~g~~qe 124 (917)
T COG0474 50 VKRRLKKYGPNELPEEKKRSLL---KKFLRQFKDPFIILLLVAALLSAFVGDWVDAG--VDAIVILLVVVINALLGFVQE 124 (917)
T ss_pred HHHHHhhcCCccccccccCcHH---HHHHHHHHHHHHHHHHHHHHHHHHhhcccccC--cceeeehHHHHHHHHHHHHHH
Confidence 4557788999999977664433 7899999999999999999998874 11111 233334456677777778888
Q ss_pred HHHhcc---hhhhccceEEEEeCCCeEEEeecccCccCcEEEeccCCcCCceEEEEeecCCCceEEEEeccCCCCCccee
Q 002656 125 WRRFMQ---DKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKV 201 (896)
Q Consensus 125 ~~r~k~---~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~~lL~ss~~~G~~~Vdes~LtGEs~~~~ 201 (896)
++..++ .+.+.+.+++|+ |||++++|+|++|+|||||+|++||.||||++||++++ .+||||+|||||.|+.
T Consensus 125 ~~a~~~l~~lk~~~~~~~~V~-R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~----l~VdEs~LTGES~pv~ 199 (917)
T COG0474 125 YRAEKALEALKKMSSPKAKVL-RDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD----LEVDESALTGESLPVE 199 (917)
T ss_pred HHHHHHHHHHHhhccCceEEE-eCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC----ceEEcccccCCCcchh
Confidence 888655 555567899999 89999999999999999999999999999999999874 5999999999999999
Q ss_pred ecccccCCCCCchhhhccceEEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeeccceeecCCeEEEEEEEecccccee
Q 002656 202 KRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVM 281 (896)
Q Consensus 202 K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~g~Vi~tG~~Tk~~ 281 (896)
|.+..... .+.|. .++..|++|+||.+++ |.+.|+|++||++|+++
T Consensus 200 K~~~~~~~----------------~~~~~-----------------~~d~~n~l~sGt~V~~-G~~~giVvaTG~~T~~G 245 (917)
T COG0474 200 KQALPLTK----------------SDAPL-----------------GLDRDNMLFSGTTVVS-GRAKGIVVATGFETEFG 245 (917)
T ss_pred cccccccc----------------ccccc-----------------cCCccceEEeCCEEEc-ceEEEEEEEEcCccHHH
Confidence 99875541 00110 1467788888888885 44999999999999998
Q ss_pred eccCCCC---CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCCcccCCCCCchhHHHHHHH
Q 002656 282 QNATTSP---SKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVT 358 (896)
Q Consensus 282 ~~~~~~~---~k~s~l~~~~~~~~~~~~~~~ii~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (896)
++....+ ...+++++.++++..+++.+.++++++.++...+... . .| ...|++
T Consensus 246 ~ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~-~---~~--------------------~~~~~~ 301 (917)
T COG0474 246 KIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGG-N---GL--------------------LESFLT 301 (917)
T ss_pred HHHHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-c---cH--------------------HHHHHH
Confidence 8777433 4679999999999999999999999988887633211 1 13 368999
Q ss_pred HHHHhccccccchhhhHHHHHHHHHHHHhhccccccCCCCCCceeecccccccccceeEEEecCCCcccccceEEEEEEE
Q 002656 359 ALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSV 438 (896)
Q Consensus 359 ~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i 438 (896)
++++++.+||++||+.+++++.+++.+| +++++++|+++++|+||++++||||||||||+|+|+|.++++
T Consensus 302 ~v~l~va~IPegLp~~vti~la~g~~~m----------ak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~ 371 (917)
T COG0474 302 ALALAVAAVPEGLPAVVTIALALGAQRM----------AKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYI 371 (917)
T ss_pred HHHHHHhccccchHHHHHHHHHHHHHHH----------HhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEe
Confidence 9999999999999999999999999999 889999999999999999999999999999999999999998
Q ss_pred cCeeccCCchHHHHHHHHhhhhchhhhhhhhhcccccCCCCccccccccccCCCCccccccCCCccccccccccCCCCCC
Q 002656 439 AGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEP 518 (896)
Q Consensus 439 ~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (896)
++. +.+.+. ....
T Consensus 372 ~~~--~~~~~~-----------------------------------------------------------------~~~~ 384 (917)
T COG0474 372 NGG--GKDIDD-----------------------------------------------------------------KDLK 384 (917)
T ss_pred CCC--cccccc-----------------------------------------------------------------cccc
Confidence 741 000000 0001
Q ss_pred ChHHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEe
Q 002656 519 NVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKIL 598 (896)
Q Consensus 519 ~~~~~~~~~~~la~C~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il 598 (896)
.......++..+++||++.+..+ + .+..+||+|.||++++.+.|+.+ . .. .....|+++
T Consensus 385 ~~~~~~~~l~~~~lc~~~~~~~~-~----~~~~gdptE~Al~~~a~~~~~~~-~--~~-------------~~~~~~~~~ 443 (917)
T COG0474 385 DSPALLRFLLAAALCNSVTPEKN-G----WYQAGDPTEGALVEFAEKLGFSL-D--LS-------------GLEVEYPIL 443 (917)
T ss_pred cchHHHHHHHHHHhcCccccccc-C----ceecCCccHHHHHHHHHhcCCcC-C--HH-------------HHhhhccee
Confidence 12234478999999999988754 2 67789999999999999998743 1 00 024567889
Q ss_pred eeecCCCCCeeEEEEEEcCCCcEEEEEcccchhhhHhhhc------cccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHH
Q 002656 599 NLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSK------NGRMYEEATTKLLNEYGEAGLRTLALAYKQLDES 672 (896)
Q Consensus 599 ~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~------~~~~~~~~~~~~~~~~~~~G~r~l~~A~k~l~~~ 672 (896)
+.+||+|.|||||||+++.++++++|||||||+|+++|+. ..++.++.+....++|+++|||+|++|||.++..
T Consensus 444 ~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~ 523 (917)
T COG0474 444 AEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRA 523 (917)
T ss_pred EEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcc
Confidence 9999999999999999987888999999999999999985 2234678889999999999999999999977654
Q ss_pred HHHHHHHHHHHHHhhhccCHHHHHHHHHHhhhcccEEEEeeeeccccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHH
Q 002656 673 EYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIG 752 (896)
Q Consensus 673 e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA 752 (896)
+.. . .. +.+|+||+|+|+++|+||+|++|+++|+.|++|||+|||+||||++||++||
T Consensus 524 ~~~----------------~-----~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa 581 (917)
T COG0474 524 EKD----------------D-----EV-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIA 581 (917)
T ss_pred ccc----------------c-----hh-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHH
Confidence 311 1 11 6789999999999999999999999999999999999999999999999999
Q ss_pred HhccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcchhHHHHHHHH
Q 002656 753 FACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGL 832 (896)
Q Consensus 753 ~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l 832 (896)
++||+..+.. . +++|||.+|..+.++++.+.+
T Consensus 582 ~~~Gi~~~~~--------------------------------------------~-~~vi~G~el~~l~~~el~~~~--- 613 (917)
T COG0474 582 KECGIEAEAE--------------------------------------------S-ALVIDGAELDALSDEELAELV--- 613 (917)
T ss_pred HHcCCCCCCC--------------------------------------------c-eeEeehHHhhhcCHHHHHHHh---
Confidence 9999865321 0 579999999998887554444
Q ss_pred hhhcCceEEEeCCcccHHHHHHHHhccCCCEEEEEcCChhhHHHHHHCCccEEEe--CccccccC
Q 002656 833 AVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS--GVEGMQVG 895 (896)
Q Consensus 833 ~~~~~~vv~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~~L~~AdVGI~is--g~eg~qaa 895 (896)
..+. ||||++|+||++||+.+|+ .|++|+|+|||+||+||||+|||||||. |+|++.+|
T Consensus 614 -~~~~--VfARvsP~qK~~IV~~lq~-~g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~A 674 (917)
T COG0474 614 -EELS--VFARVSPEQKARIVEALQK-SGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEA 674 (917)
T ss_pred -hhCc--EEEEcCHHHHHHHHHHHHh-CCCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhh
Confidence 4444 9999999999999999999 7999999999999999999999999985 56655544
No 6
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=9.9e-92 Score=873.49 Aligned_cols=666 Identities=21% Similarity=0.269 Sum_probs=483.6
Q ss_pred CCcCCCCCCCceeeccccchhhhhHHHHHHHhhhHHHHHHHHHHHHhcccCCCCCCcccccchhhhhhHHHHHHHHHHHH
Q 002656 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWR 126 (896)
Q Consensus 47 ~~~~~~~~g~N~i~~~k~~~~~flp~~l~~~f~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~~~~~~~d~~ 126 (896)
...|+.+||+|.+..++.+++ +.|+++|..|+++++++++++|++ ..++.+.+.++++++++.+...+++++
T Consensus 145 ~~~r~~~yG~N~i~~~~~s~~----~ll~~~~~~p~~i~~i~~~~l~~~----~~~~~~~~~i~~i~~~~~~~~~~~~~k 216 (1054)
T TIGR01657 145 IAQRKAKYGKNEIEIPVPSFL----ELLKEEVLHPFYVFQVFSVILWLL----DEYYYYSLCIVFMSSTSISLSVYQIRK 216 (1054)
T ss_pred HHHHHHhcCCCeeecCCCCHH----HHHHHHHhchHHHHHHHHHHHHHh----hhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345778899999999876655 889999999999999999888876 344444444556666777777777777
Q ss_pred Hhcchhhhc--cceEEEEeCCCeEEEeecccCccCcEEEec--cCCcCCceEEEEeecCCCceEEEEeccCCCCCcceee
Q 002656 127 RFMQDKEVN--ARKVSVHVGNGVFSYKPWEKIQVGDIVKVE--KDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVK 202 (896)
Q Consensus 127 r~k~~~~~n--~~~~~V~~r~g~~~~i~~~~L~vGDII~l~--~ge~vPaD~~lL~ss~~~G~~~Vdes~LtGEs~~~~K 202 (896)
..++.+.+. ++.++|+ |||+|++|++++|+|||||.|+ +|+.+|||++||+ |.|.||||+|||||.|+.|
T Consensus 217 ~~~~L~~~~~~~~~v~V~-Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~-----g~~~VdES~LTGES~Pv~K 290 (1054)
T TIGR01657 217 QMQRLRDMVHKPQSVIVI-RNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLS-----GSCIVNESMLTGESVPVLK 290 (1054)
T ss_pred HHHHHHHhhcCCeeEEEE-ECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEe-----CcEEEecccccCCccceec
Confidence 777666554 4689999 8999999999999999999999 9999999999998 6799999999999999999
Q ss_pred cccccCCCCCchhhhccceEEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeeccceeec------CCeEEEEEEEecc
Q 002656 203 RAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRN------TAHVYGSVIFTGH 276 (896)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~n------t~~~~g~Vi~tG~ 276 (896)
.+.+.... ..+. +.. ...+..|+++.||.+.. .|.+.|+|++||.
T Consensus 291 ~~~~~~~~--~~~~-------~~~--------------------~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~ 341 (1054)
T TIGR01657 291 FPIPDNGD--DDED-------LFL--------------------YETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGF 341 (1054)
T ss_pred ccCCcccc--cccc-------ccc--------------------cccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCc
Confidence 88643100 0000 000 11234455555555542 4679999999999
Q ss_pred ccceeeccC---CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCCcccCCCCCchhHH
Q 002656 277 DSKVMQNAT---TSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGL 353 (896)
Q Consensus 277 ~Tk~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~ii~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (896)
+|..++..+ .+....+++++.+.+++.+++++.++.+++.++.. +... ..| .
T Consensus 342 ~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~~-~~~~----~~~--------------------~ 396 (1054)
T TIGR01657 342 STSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIEL-IKDG----RPL--------------------G 396 (1054)
T ss_pred cccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcC----CcH--------------------H
Confidence 996655543 44555688899888887766655444333322211 1111 112 3
Q ss_pred HHHHHHHHHhccccccchhhhHHHHHHHHHHHHhhccccccCCCCCCceeecccccccccceeEEEecCCCcccccceEE
Q 002656 354 AHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDF 433 (896)
Q Consensus 354 ~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~ 433 (896)
..|++++.+++.+||++||++++++..++..++ ++++++|+++.++|.||+++++|||||||||+|+|.|
T Consensus 397 ~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL----------~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v 466 (1054)
T TIGR01657 397 KIILRSLDIITIVVPPALPAELSIGINNSLARL----------KKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDL 466 (1054)
T ss_pred HHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHH----------HHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeE
Confidence 578889999999999999999999999999988 8899999999999999999999999999999999999
Q ss_pred EEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhcccccCCCCccccccccccCCCCccccccCCCccccccccccC
Q 002656 434 LKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGN 513 (896)
Q Consensus 434 ~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (896)
.+++..+...... ..
T Consensus 467 ~~v~~~~~~~~~~-~~---------------------------------------------------------------- 481 (1054)
T TIGR01657 467 RGVQGLSGNQEFL-KI---------------------------------------------------------------- 481 (1054)
T ss_pred EeEecccCccccc-cc----------------------------------------------------------------
Confidence 9987533210000 00
Q ss_pred CCCCCChHHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEE-EcCCe-----EEEEecCCCC
Q 002656 514 WLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYR-RTQSS-----VFIRERYPPK 587 (896)
Q Consensus 514 ~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~-~~~~~-----~~i~~~~~~~ 587 (896)
...........+..++++||++....+ ...++|.|.|+++++ |+.+.. ..... ..+.. .
T Consensus 482 -~~~~~~~~~~~~~~~~a~C~~~~~~~~-------~~~Gdp~E~al~~~~---~~~~~~~~~~~~~~~~~~~i~~----~ 546 (1054)
T TIGR01657 482 -VTEDSSLKPSITHKALATCHSLTKLEG-------KLVGDPLDKKMFEAT---GWTLEEDDESAEPTSILAVVRT----D 546 (1054)
T ss_pred -cccccccCchHHHHHHHhCCeeEEECC-------EEecCHHHHHHHHhC---CCEEECCCCcccccccccceec----c
Confidence 000000112246778999999865421 236899999999975 555432 11000 00000 0
Q ss_pred CCCceeEEEEeeeecCCCCCeeEEEEEEcCC-CcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEE
Q 002656 588 GQPVEREFKILNLLDFTSKRKRMSVIVRDED-GQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAY 666 (896)
Q Consensus 588 ~~~~~~~~~il~~~~F~s~rkrmsviv~~~~-~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~ 666 (896)
+ ....|++++.+||+|+|||||||+++++ +++++|+|||||.|+++|+.. ..++.+.+.+++|+.+|+|||++||
T Consensus 547 ~--~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~--~~p~~~~~~~~~~a~~G~RVLalA~ 622 (1054)
T TIGR01657 547 D--PPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE--TVPSDYQEVLKSYTREGYRVLALAY 622 (1054)
T ss_pred C--CCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc--CCChhHHHHHHHHHhcCCEEEEEEE
Confidence 0 1367999999999999999999999754 568899999999999999864 3577888999999999999999999
Q ss_pred EeCCHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHhhhcccEEEEeeeeccccCCChHHHHHHHHHcCCeEEEEcCCcHH
Q 002656 667 KQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKME 746 (896)
Q Consensus 667 k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ 746 (896)
|++++.++.++.. .+| +.+|+||+|+|+++|+||+|++++++|+.|++|||+|||+|||++.
T Consensus 623 k~l~~~~~~~~~~----------~~r--------~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~ 684 (1054)
T TIGR01657 623 KELPKLTLQKAQD----------LSR--------DAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPL 684 (1054)
T ss_pred eecCccchhhhhh----------ccH--------HHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHH
Confidence 9997543322211 133 5679999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccccccCceEEEEecCCchhhH-HHH-HHHHHHH----HHHHHHhhhhhhhccCCCCCceEEEEeCchhhhh
Q 002656 747 TAINIGFACSLLRQGMKQICITALNSDSVG-KAA-KEAVKDN----ILMQITNASQMIKLERDPHAAYALIIEGKTLAYA 820 (896)
Q Consensus 747 tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~-~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~ 820 (896)
||.+||++|||++++...+..+....+... ... +....+. .....................+.++++|++|..+
T Consensus 685 TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l 764 (1054)
T TIGR01657 685 TAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVL 764 (1054)
T ss_pred HHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHH
Confidence 999999999999876555544321110000 000 0000000 0000000000000001123457899999999876
Q ss_pred cchhHHHHHHHHhhhcCceEEEeCCcccHHHHHHHHhccCCCEEEEEcCChhhHHHHHHCCccEEEeCccccccCC
Q 002656 821 LEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQVGT 896 (896)
Q Consensus 821 l~~~~~~~~~~l~~~~~~vv~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~~L~~AdVGI~isg~eg~qaa~ 896 (896)
.+. ..+.+.++...+ .||||++|+||..+|+.+|+ .|++|+|||||+||+|||++|||||||++.|++.||+
T Consensus 765 ~~~-~~~~l~~~~~~~--~VfAR~sP~qK~~iV~~lq~-~g~~V~m~GDG~ND~~ALK~AdVGIam~~~das~AA~ 836 (1054)
T TIGR01657 765 QAH-SPELLLRLLSHT--TVFARMAPDQKETLVELLQK-LDYTVGMCGDGANDCGALKQADVGISLSEAEASVAAP 836 (1054)
T ss_pred HHh-hHHHHHHHHhcC--eEEEecCHHHHHHHHHHHHh-CCCeEEEEeCChHHHHHHHhcCcceeeccccceeecc
Confidence 432 123345555544 49999999999999999998 8999999999999999999999999999999998885
No 7
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-93 Score=793.98 Aligned_cols=662 Identities=23% Similarity=0.294 Sum_probs=500.8
Q ss_pred cCCcCCCCCCCceeeccccchhhhhHHHHHHHhhhHHHHHHHHHHHHhcccCCCCCCcccccchhhhhhHHHHHHHHHHH
Q 002656 46 MHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDW 125 (896)
Q Consensus 46 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~~f~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~~~~~~~d~ 125 (896)
+...|++.||.|++....-..++ +.+++||.++....+|+++++|++. .++.-.+.+.+++++++...++++|
T Consensus 28 ev~~r~~~yG~Nel~~ee~~~~w---k~vLeQF~n~Li~iLL~sA~ISfvl----~~~~e~~vI~liiv~nvtVG~~QEy 100 (972)
T KOG0202|consen 28 EVTRRRKKYGENELPAEEGESLW---KLVLEQFDNPLILILLLSAAISFVL----ADFDEPFVITLIIVINVTVGFVQEY 100 (972)
T ss_pred HHHHHHHhcCCccCccccCCcHH---HHHHHHHHhHHHHHHHHHHHHHHHH----Hhcccceeeeeeeeeeeeeeeeeeh
Confidence 44567889999999977655544 8999999999999999999999984 3333444444556677777889999
Q ss_pred HHhcchhhhcc---ceEEEEeCCCeEEEeecccCccCcEEEeccCCcCCceEEEEeecCCCceEEEEeccCCCCCcceee
Q 002656 126 RRFMQDKEVNA---RKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVK 202 (896)
Q Consensus 126 ~r~k~~~~~n~---~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~~lL~ss~~~G~~~Vdes~LtGEs~~~~K 202 (896)
+..|+.+++++ ..|+|+ |+|+.+.+++++|||||||.|+-||.||||++|++..+ ..||||+|||||.|+.|
T Consensus 101 ~aEkalEaLk~l~p~~~~V~-R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~~s----l~iDeS~LTGEs~pv~K 175 (972)
T KOG0202|consen 101 NAEKALEALKELVPPMAHVL-RSGKLQHILARELVPGDIVELKVGDKIPADLRLIEAKS----LRIDESSLTGESEPVSK 175 (972)
T ss_pred hhHHHHHHHHhcCCccceEE-ecCcccceehhccCCCCEEEEecCCccccceeEEeeee----eeeecccccCCcccccc
Confidence 99998877765 789999 89999999999999999999999999999999999886 88999999999999999
Q ss_pred cccccCCCCCchhhhccceEEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeeccceeecCCeEEEEEEEeccccceee
Q 002656 203 RAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQ 282 (896)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~g~Vi~tG~~Tk~~~ 282 (896)
........ + +....+.....|+||.+..|+ +.|+|+.||.+|.++.
T Consensus 176 ~t~~v~~~--~-----------~~~~~dk~NiaFsGT~V~~G~---------------------a~GIVi~TG~nTeiG~ 221 (972)
T KOG0202|consen 176 DTDAVPKD--E-----------NADVQDKKNIAFSGTLVVAGR---------------------AKGIVIGTGLNTEIGK 221 (972)
T ss_pred cCccccCC--C-----------CCccccceeeEeecceeecCc---------------------eeEEEEeccccchHHH
Confidence 76543210 0 001112233457777777666 9999999999997654
Q ss_pred ccC---CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH-hheeecccCCCccccCCCCCCcccCCCCCchhHHHHHHH
Q 002656 283 NAT---TSPSKRSGIEKKMDKIIFILFAILVLISLISSIG-FAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVT 358 (896)
Q Consensus 283 ~~~---~~~~k~s~l~~~~~~~~~~~~~~~ii~~~i~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (896)
... ..+..++|+|+++|.+...+.-+..++|+..+++ .+.+..-.+-..|+ ...+..|..
T Consensus 222 I~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~f----------------k~~~~~f~I 285 (972)
T KOG0202|consen 222 IFKMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWF----------------KGALYYFKI 285 (972)
T ss_pred HHHHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccch----------------hchhhhhhH
Confidence 332 3455689999999999998885555555555544 22222100111232 334567888
Q ss_pred HHHHhccccccchhhhHHHHHHHHHHHHhhccccccCCCCCCceeecccccccccceeEEEecCCCcccccceEEEEEEE
Q 002656 359 ALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSV 438 (896)
Q Consensus 359 ~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i 438 (896)
++.+.+.+||.+||+.+++...++..+| ++++++||.+...|.||.+++||+|||||||+|+|.+.++++
T Consensus 286 aVsLAVAAIPEGLPaVvT~tLALG~~rM----------akknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~ 355 (972)
T KOG0202|consen 286 AVSLAVAAIPEGLPAVVTTTLALGTRRM----------AKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFI 355 (972)
T ss_pred HHHHHHHhccCCCcchhhhhHHHhHHHH----------HhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEe
Confidence 9999999999999999999999999988 999999999999999999999999999999999999999998
Q ss_pred cCeeccCCchHHHHHHHHhhhhchhhhhhhhhcccccCCCCccccccccccCCCCccccccCCCccccccccccCCCCCC
Q 002656 439 AGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEP 518 (896)
Q Consensus 439 ~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (896)
-+..++.. ++ +...+. +....+-.+.+..- ......
T Consensus 356 ~~~~~~~~-~~-------------------------------f~~tg~---------ty~~~g~v~~~~~~---~~~~~~ 391 (972)
T KOG0202|consen 356 PDGGTATV-DE-------------------------------FNPTGT---------TYSPEGEVFKDGLY---EKDKAG 391 (972)
T ss_pred cccccccc-cc-------------------------------cccCCc---------eeCCCCceEecCcc---cccccc
Confidence 66554322 00 000000 00001111111100 001233
Q ss_pred ChHHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEe
Q 002656 519 NVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKIL 598 (896)
Q Consensus 519 ~~~~~~~~~~~la~C~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il 598 (896)
..+.++++..+.++||.+...+++. +.++ ..+.|.|.||..+|.++|+.-......+ -.+ .+...+.....++..
T Consensus 392 ~~~~l~~l~~i~~lCNda~v~~~~~-~~~~-~~G~pTE~AL~vlaeKm~l~~~~~~~~s--~~~-~~~c~~~~~~~~~~~ 466 (972)
T KOG0202|consen 392 DNDLLQELAEICALCNDATVEYNDA-DCYE-KVGEPTEGALIVLAEKMGLPGTRSTNLS--NEE-ASACNRVYSRLFKKI 466 (972)
T ss_pred ccHHHHHHHHHHHhhhhhhhhcCch-hhHH-hcCCchHHHHHHHHHHcCCCcchhhccc--ccc-cccchhHHHHhhhhe
Confidence 4567889999999999988776653 2222 2489999999999999998643311100 001 112222234566777
Q ss_pred eeecCCCCCeeEEEEEEcCCCc--EEEEEcccchhhhHhhhcc-----------ccccHHHHHHHHHHHHhcCCeEEEEE
Q 002656 599 NLLDFTSKRKRMSVIVRDEDGQ--ILLLCKGADSIIFDRLSKN-----------GRMYEEATTKLLNEYGEAGLRTLALA 665 (896)
Q Consensus 599 ~~~~F~s~rkrmsviv~~~~~~--~~l~~KGa~~~i~~~~~~~-----------~~~~~~~~~~~~~~~~~~G~r~l~~A 665 (896)
..+||+|+||+|||.+.++.+. +.+|+|||+|.|+++|+.. .+..++.+.+...+|+.+|+|||++|
T Consensus 467 ~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA 546 (972)
T KOG0202|consen 467 AELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALA 546 (972)
T ss_pred eEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEE
Confidence 9999999999999999986664 8999999999999999541 12367889999999999999999999
Q ss_pred EEeCCH---HHHHHHHHHHHHHHhhhccCHHHHHHHHHHhhhcccEEEEeeeeccccCCChHHHHHHHHHcCCeEEEEcC
Q 002656 666 YKQLDE---SEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTG 742 (896)
Q Consensus 666 ~k~l~~---~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~aGIkv~mlTG 742 (896)
+++.+. ++...|.. .+ +...|.||+|+|++|+.||+|++|.++|+.|++|||+|.|+||
T Consensus 547 ~~~~~~~~~~~~~l~~~----------s~--------~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITG 608 (972)
T KOG0202|consen 547 SKDSPGQVPDDQDLNDT----------SN--------RATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITG 608 (972)
T ss_pred ccCCcccChhhhhhccc----------cc--------ccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcC
Confidence 998763 11111110 11 2578999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcc
Q 002656 743 DKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALE 822 (896)
Q Consensus 743 D~~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~ 822 (896)
|+++||.+||++.||...+.+ -..-+++|++|+.+.+
T Consensus 609 D~~~TA~AI~r~iGi~~~~ed-------------------------------------------~~~~~~TG~efD~ls~ 645 (972)
T KOG0202|consen 609 DNKETAEAIAREIGIFSEDED-------------------------------------------VSSMALTGSEFDDLSD 645 (972)
T ss_pred CCHHHHHHHHHHhCCCcCCcc-------------------------------------------ccccccchhhhhcCCH
Confidence 999999999999998875422 0123778988887766
Q ss_pred hhHHHHHHHHhhhcCceEEEeCCcccHHHHHHHHhccCCCEEEEEcCChhhHHHHHHCCccEEE--eCccccccCC
Q 002656 823 DDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI--SGVEGMQVGT 896 (896)
Q Consensus 823 ~~~~~~~~~l~~~~~~vv~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~~L~~AdVGI~i--sg~eg~qaa~ 896 (896)
+++..... +..+|+|++|++|.+||+.||+ .|.+|+|+|||+||+|||+.||||||| +|+++...|+
T Consensus 646 ~~~~~~~~------~~~vFaR~~P~HK~kIVeaLq~-~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAs 714 (972)
T KOG0202|consen 646 EELDDAVR------RVLVFARAEPQHKLKIVEALQS-RGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEAS 714 (972)
T ss_pred HHHHHHhh------cceEEEecCchhHHHHHHHHHh-cCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhh
Confidence 66553332 4569999999999999999998 899999999999999999999999977 7999876664
No 8
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=3e-91 Score=860.13 Aligned_cols=682 Identities=19% Similarity=0.222 Sum_probs=485.2
Q ss_pred cCCcCCCCCCCceeeccccchhhhhHHHHHHHhhhHHHHHHHHHHHHhcccCCCCCCcccccchhhhhhHHHHHHHHHHH
Q 002656 46 MHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDW 125 (896)
Q Consensus 46 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~~f~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~~~~~~~d~ 125 (896)
+...|+.+||+|.++.++...++ +.|++||..++.++++++++++++. ..|.. .+.++++++++++..+++++
T Consensus 31 ea~~rl~~~G~N~l~~~~~~s~~---~~~l~q~~~~~~~iL~~aails~~~---~~~~~-~~iIl~vv~in~~i~~~QE~ 103 (1053)
T TIGR01523 31 EAQHRLKEVGENRLEADSGIDAK---AMLLHQVCNAMCMVLIIAAAISFAM---HDWIE-GGVISAIIALNILIGFIQEY 103 (1053)
T ss_pred HHHHHHHHcCCCCCCCCCCCCHH---HHHHHHHhCHHHHHHHHHHHHHHHH---hhHHH-HHHHHhHHHHHHHHHHHHHH
Confidence 34568889999999988765443 7899999999999999999999974 33444 44466777889999999999
Q ss_pred HHhcchhhhc---cceEEEEeCCCeEEEeecccCccCcEEEeccCCcCCceEEEEeecCCCceEEEEeccCCCCCcceee
Q 002656 126 RRFMQDKEVN---ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVK 202 (896)
Q Consensus 126 ~r~k~~~~~n---~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~~lL~ss~~~G~~~Vdes~LtGEs~~~~K 202 (896)
+..++...+. ..+++|+ |||++++|++++|+|||||.|++||.||||++|+++++ +.||||+|||||.|+.|
T Consensus 104 ~aekal~aL~~l~~~~~~Vi-Rdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~~~----L~VDES~LTGES~pV~K 178 (1053)
T TIGR01523 104 KAEKTMDSLKNLASPMAHVI-RNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKN----FDTDEALLTGESLPVIK 178 (1053)
T ss_pred HHHHHHHHHhccCCCceEEE-eCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEeCc----eEEEchhhcCCCCceec
Confidence 9999876554 4789999 89999999999999999999999999999999999765 89999999999999999
Q ss_pred cccccCCCCCchhhhccceEEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeeccceeecCCeEEEEEEEeccccceee
Q 002656 203 RAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQ 282 (896)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~g~Vi~tG~~Tk~~~ 282 (896)
.+...... .+. ..........|+||.+.+|+ +.|+|++||.+|.+++
T Consensus 179 ~~~~~~~~---~~~---------~~~~d~~n~lf~GT~V~~G~---------------------g~~vVvatG~~T~~Gk 225 (1053)
T TIGR01523 179 DAHATFGK---EED---------TPIGDRINLAFSSSAVTKGR---------------------AKGICIATALNSEIGA 225 (1053)
T ss_pred cccccccc---ccc---------CCcccCCCccccCceEEeee---------------------EEEEEEEecCccHHHH
Confidence 86421100 000 00001122335555555554 9999999999997655
Q ss_pred ccCCC---C-----------------------------------CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheee
Q 002656 283 NATTS---P-----------------------------------SKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKI 324 (896)
Q Consensus 283 ~~~~~---~-----------------------------------~k~s~l~~~~~~~~~~~~~~~ii~~~i~~i~~~~~~ 324 (896)
..... . ..+||+|++++++..+++.+.++++++.+++..+
T Consensus 226 Ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~-- 303 (1053)
T TIGR01523 226 IAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF-- 303 (1053)
T ss_pred HHHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh--
Confidence 43311 0 0149999999999999988888888776654321
Q ss_pred cccCCCccccCCCCCCcccCCCCCchhHHHHHHHHHHHhccccccchhhhHHHHHHHHHHHHhhccccccCCCCCCceee
Q 002656 325 NYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQAR 404 (896)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~v~ 404 (896)
. .| ...+.+++.+++.++|++||+.++++..+++.+| ++++++||
T Consensus 304 ~-----~~--------------------~~~~~~av~l~Va~VPegLp~~vti~La~g~~rM----------ak~~~lVr 348 (1053)
T TIGR01523 304 D-----VD--------------------KEVAIYAICLAISIIPESLIAVLSITMAMGAANM----------SKRNVIVR 348 (1053)
T ss_pred h-----hh--------------------HHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHH----------HhcCCEec
Confidence 0 11 1355678899999999999999999999999998 88999999
Q ss_pred cccccccccceeEEEecCCCcccccceEEEEEEEcCe-eccCCchHHHHHHHHhhhhchhhhhhhhhcccccCCCCcccc
Q 002656 405 TSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGT-AYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIEL 483 (896)
Q Consensus 405 ~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~-~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (896)
+++++|+||.+++||+|||||||+|+|.+.++++++. .|....... +...+..+ . .....
T Consensus 349 ~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~--------~~~~~~g~-----~------~~~~~ 409 (1053)
T TIGR01523 349 KLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDD--------AFNPNEGN-----V------SGIPR 409 (1053)
T ss_pred cchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCC--------CCCCcccc-----c------ccccc
Confidence 9999999999999999999999999999999998652 221100000 00000000 0 00000
Q ss_pred ccccccCCCCccccccCCCccccccccccCC-CCCCChHHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHH
Q 002656 484 ETVITSNDGNDFKRRIKGFNFEDSRLMDGNW-LKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVA 562 (896)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~~~~~sp~e~Al~~~ 562 (896)
.. ...........+.+........+... .....+..+..++.++++||++....++..+.. ...++|+|.||+.+
T Consensus 410 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~-~~~GdptE~ALl~~ 485 (1053)
T TIGR01523 410 FS---PYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCW-KAHGDPTEIAIHVF 485 (1053)
T ss_pred cc---cccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCce-eeCcCccHHHHHHH
Confidence 00 00000000000000000000000000 000012345678899999998876433222221 23589999999999
Q ss_pred HHHCCcEEEEE---c------C-CeEEEEecCCCCCCCceeEEEEeeeecCCCCCeeEEEEEEcCCC-cEEEEEcccchh
Q 002656 563 AREFGFEFYRR---T------Q-SSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDG-QILLLCKGADSI 631 (896)
Q Consensus 563 a~~~g~~~~~~---~------~-~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~-~~~l~~KGa~~~ 631 (896)
|.+.|+..... . . ....+.... .+.....|++++.+||+|+|||||++++++++ .+++|+|||||.
T Consensus 486 a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~ 562 (1053)
T TIGR01523 486 AKKFDLPHNALTGEEDLLKSNENDQSSLSQHN---EKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFER 562 (1053)
T ss_pred HHHcCCCcccccchhhhhhhcccccccccccc---ccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHH
Confidence 99999743100 0 0 000000000 00013568999999999999999999997654 589999999999
Q ss_pred hhHhhhcc-----------ccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhccCHHHHHHHHH
Q 002656 632 IFDRLSKN-----------GRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVS 700 (896)
Q Consensus 632 i~~~~~~~-----------~~~~~~~~~~~~~~~~~~G~r~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~ 700 (896)
|+++|+.. .++.++.+.+++++|+.+|+|||++|||.++.+++..+ .+.. .. .+|
T Consensus 563 il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~--~~~~---~~-~~~-------- 628 (1053)
T TIGR01523 563 IIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDD--QLKN---ET-LNR-------- 628 (1053)
T ss_pred HHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccch--hhhc---cc-cch--------
Confidence 99999741 12346778888999999999999999999987554221 1100 00 012
Q ss_pred HhhhcccEEEEeeeeccccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHH
Q 002656 701 DMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAK 780 (896)
Q Consensus 701 ~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~ 780 (896)
+.+|+||+|+|+++++||+|++++++|+.|+++||+|||+|||++.||.+||++|||++++.. ....
T Consensus 629 ~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~---~~~~---------- 695 (1053)
T TIGR01523 629 ATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFI---HDRD---------- 695 (1053)
T ss_pred hhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcccc---cccc----------
Confidence 357899999999999999999999999999999999999999999999999999999864311 0000
Q ss_pred HHHHHHHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcchhHHHHHHHHhhhcCceEEEeCCcccHHHHHHHHhccC
Q 002656 781 EAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGT 860 (896)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vv~~r~sP~qK~~iV~~lk~~~ 860 (896)
......+++|++|..+.++++.+.. ....||||++|+||.++|+.+|+ .
T Consensus 696 ------------------------~~~~~~vitG~~l~~l~~~~l~~~~------~~~~V~ar~sP~~K~~iV~~lq~-~ 744 (1053)
T TIGR01523 696 ------------------------EIMDSMVMTGSQFDALSDEEVDDLK------ALCLVIARCAPQTKVKMIEALHR-R 744 (1053)
T ss_pred ------------------------ccccceeeehHHhhhcCHHHHHHHh------hcCeEEEecCHHHHHHHHHHHHh-c
Confidence 0012369999999987665554332 23469999999999999999998 8
Q ss_pred CCEEEEEcCChhhHHHHHHCCccEEE--eCccccc
Q 002656 861 GKTTLAIGDGANDVGMIQEADIGIGI--SGVEGMQ 893 (896)
Q Consensus 861 g~~vl~iGDG~ND~~~L~~AdVGI~i--sg~eg~q 893 (896)
|++|+|+|||+||+|||++|||||+| +|+|+.+
T Consensus 745 g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak 779 (1053)
T TIGR01523 745 KAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAK 779 (1053)
T ss_pred CCeeEEeCCCcchHHHHHhCCccEecCCCccHHHH
Confidence 99999999999999999999999987 5888543
No 9
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=6.5e-91 Score=860.47 Aligned_cols=647 Identities=21% Similarity=0.254 Sum_probs=496.2
Q ss_pred cCCcCCCCCCCceeeccccchhhhhHHHHHHHhhhHHHHHHHHHHHHhcccCCC---------CCCcccccchhhhhhHH
Q 002656 46 MHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSP---------FSPVSMLLPLAIVVGVS 116 (896)
Q Consensus 46 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~~f~~~~n~~~l~~~il~~~~~~~---------~~~~~~~~~l~~vl~i~ 116 (896)
+...|+.+||+|.++.++...++ +.|+++|..++++.++++++++++.... ...+...++++++++++
T Consensus 41 e~~~rl~~~G~N~l~~~~~~~~~---~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~ 117 (997)
T TIGR01106 41 RAAEILARDGPNALTPPPTTPEW---VKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIIT 117 (997)
T ss_pred HHHHHHHHhCCCCCCCCCCCCHH---HHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCCCcccccHHHHHHHHHHHHHH
Confidence 34668889999999887766443 7899999999999999999997653110 12233445677888899
Q ss_pred HHHHHHHHHHHhcchhhhcc---ceEEEEeCCCeEEEeecccCccCcEEEeccCCcCCceEEEEeecCCCceEEEEeccC
Q 002656 117 MAKEALEDWRRFMQDKEVNA---RKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNL 193 (896)
Q Consensus 117 ~~~~~~~d~~r~k~~~~~n~---~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~~lL~ss~~~G~~~Vdes~L 193 (896)
++..++++++++++++.+++ .+++|+ |||++++|++++|+|||||.|++||.||||++|+++++ +.||||+|
T Consensus 118 ~~i~~~qe~ka~~~l~~l~~~~~~~~~Vi-Rdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~----l~VdeS~L 192 (997)
T TIGR01106 118 GCFSYYQEAKSSKIMESFKNMVPQQALVI-RDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG----CKVDNSSL 192 (997)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCeeEEE-ECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC----cEEEcccc
Confidence 99999999999998887765 589999 89999999999999999999999999999999999653 89999999
Q ss_pred CCCCcceeecccccCCCCCchhhhccceEEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeeccceeecCCeEEEEEEE
Q 002656 194 DGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIF 273 (896)
Q Consensus 194 tGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~g~Vi~ 273 (896)
||||.|+.|.+.+.. ..+++..|++++||.+. .|++.|+|++
T Consensus 193 TGES~pv~K~~~~~~-------------------------------------~~~~~~~n~l~~Gt~v~-~G~~~~~V~~ 234 (997)
T TIGR01106 193 TGESEPQTRSPEFTH-------------------------------------ENPLETRNIAFFSTNCV-EGTARGIVVN 234 (997)
T ss_pred CCCCCceeccCCCcc-------------------------------------cCccccCCeEEeccEee-eeeEEEEEEE
Confidence 999999999875321 11334455666666555 2559999999
Q ss_pred eccccceeeccC---CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCCcccCCCCCch
Q 002656 274 TGHDSKVMQNAT---TSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLV 350 (896)
Q Consensus 274 tG~~Tk~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~ii~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (896)
||.+|++++... ....+++|+++.++++..++..+.++++++.++++.+... .|
T Consensus 235 tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~------------------ 291 (997)
T TIGR01106 235 TGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILGY-----TW------------------ 291 (997)
T ss_pred ccccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CH------------------
Confidence 999998877665 4556689999999999999988888877776665533211 12
Q ss_pred hHHHHHHHHHHHhccccccchhhhHHHHHHHHHHHHhhccccccCCCCCCceeecccccccccceeEEEecCCCcccccc
Q 002656 351 PGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQ 430 (896)
Q Consensus 351 ~~~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~ 430 (896)
...+.+++.+++.+||++|+++++++...++.++ +++++++|+++.+|+||++++||||||||||+|+
T Consensus 292 --~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m----------~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~ 359 (997)
T TIGR01106 292 --LEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNR 359 (997)
T ss_pred --HHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHH----------HHCCcEecCcHHHHHhcCCCEEEECCCCceecCc
Confidence 2356677888888999999999999999999988 8889999999999999999999999999999999
Q ss_pred eEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhcccccCCCCccccccccccCCCCccccccCCCcccccccc
Q 002656 431 MDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLM 510 (896)
Q Consensus 431 m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (896)
|+|.++++++..|..+.... ..+.
T Consensus 360 m~v~~~~~~~~~~~~~~~~~------------------------------------------------~~~~-------- 383 (997)
T TIGR01106 360 MTVAHMWFDNQIHEADTTED------------------------------------------------QSGV-------- 383 (997)
T ss_pred eEEEEEEECCeEEecCCccC------------------------------------------------CCCc--------
Confidence 99999998887664321000 0000
Q ss_pred ccCCCCCCChHHHHHHHHHHhhcceeeecccCCC--CceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCC
Q 002656 511 DGNWLKEPNVDTLLLFFRILAICHTAIPELNEET--GNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKG 588 (896)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~--~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~ 588 (896)
...........++.++++||++....+... -.-.+..++|+|.||++++...+.....
T Consensus 384 ----~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~---------------- 443 (997)
T TIGR01106 384 ----SFDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVME---------------- 443 (997)
T ss_pred ----cCCcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHH----------------
Confidence 000112344578889999998876432211 0012456899999999999865432100
Q ss_pred CCceeEEEEeeeecCCCCCeeEEEEEEcC---CCcEEEEEcccchhhhHhhhc---cc------cccHHHHHHHHHHHHh
Q 002656 589 QPVEREFKILNLLDFTSKRKRMSVIVRDE---DGQILLLCKGADSIIFDRLSK---NG------RMYEEATTKLLNEYGE 656 (896)
Q Consensus 589 ~~~~~~~~il~~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~---~~------~~~~~~~~~~~~~~~~ 656 (896)
.+..|+.++.+||+|+||||+++++.. ++.+++|+|||||.|+++|+. ++ ++.++.+.+.+++|++
T Consensus 444 --~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~ 521 (997)
T TIGR01106 444 --MRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGG 521 (997)
T ss_pred --HHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHh
Confidence 135678899999999999999988642 256899999999999999964 11 2346678888999999
Q ss_pred cCCeEEEEEEEeCCHHHHHH-HHHHHHHHHhhhccCHHHHHHHHHHhhhcccEEEEeeeeccccCCChHHHHHHHHHcCC
Q 002656 657 AGLRTLALAYKQLDESEYSA-WNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGL 735 (896)
Q Consensus 657 ~G~r~l~~A~k~l~~~e~~~-~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~aGI 735 (896)
+|+|||++|||.++.+++.. |.. +++ ..+.+|+||+|+|+++++||+|++++++|+.|+++||
T Consensus 522 ~GlRvla~A~k~l~~~~~~~~~~~-----------~~~-----~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi 585 (997)
T TIGR01106 522 LGERVLGFCHLYLPDEQFPEGFQF-----------DTD-----DVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGI 585 (997)
T ss_pred cCCEEEEEEEeecCcccccccccc-----------cch-----hhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCC
Confidence 99999999999998765432 211 110 1134589999999999999999999999999999999
Q ss_pred eEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCceEEEEeCc
Q 002656 736 KIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGK 815 (896)
Q Consensus 736 kv~mlTGD~~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~ 815 (896)
+|||+|||++.||.++|+++||++++.+.. + ++...+....+.. .......++++|+
T Consensus 586 ~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~-------~------------~i~~~~~~~~~~~----~~~~~~~~vi~G~ 642 (997)
T TIGR01106 586 KVIMVTGDHPITAKAIAKGVGIISEGNETV-------E------------DIAARLNIPVSQV----NPRDAKACVVHGS 642 (997)
T ss_pred eEEEECCCCHHHHHHHHHHcCCCCCCccch-------h------------hhhhhcccccccc----ccccccceEEEhH
Confidence 999999999999999999999997653210 0 0000000000000 0112234899999
Q ss_pred hhhhhcchhHHHHHHHHhhhcCceEEEeCCcccHHHHHHHHhccCCCEEEEEcCChhhHHHHHHCCccEEE--eCccccc
Q 002656 816 TLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI--SGVEGMQ 893 (896)
Q Consensus 816 ~l~~~l~~~~~~~~~~l~~~~~~vv~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~~L~~AdVGI~i--sg~eg~q 893 (896)
+|+.+.++++ .++...+..+||||++|+||..||+.+|+ .|++|+|+|||+||+|||++|||||+| +|+|+.+
T Consensus 643 ~l~~l~~~el----~~~~~~~~~~VfaR~sPeqK~~IV~~lq~-~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak 717 (997)
T TIGR01106 643 DLKDMTSEQL----DEILKYHTEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSK 717 (997)
T ss_pred HhhhCCHHHH----HHHHHhcCCEEEEECCHHHHHHHHHHHHH-CCCEEEEECCCcccHHHHhhCCcceecCCcccHHHH
Confidence 9998876544 44455566789999999999999999998 899999999999999999999999976 6899665
Q ss_pred cC
Q 002656 894 VG 895 (896)
Q Consensus 894 aa 895 (896)
+|
T Consensus 718 ~a 719 (997)
T TIGR01106 718 QA 719 (997)
T ss_pred Hh
Confidence 44
No 10
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=4.9e-90 Score=850.86 Aligned_cols=612 Identities=22% Similarity=0.295 Sum_probs=467.5
Q ss_pred cCCcCCCCCCCceeeccccchhhhhHHHHHHHhhhHHHHHHHHHHHHhcccC--CC--------CCCccccc---chhhh
Q 002656 46 MHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPL--SP--------FSPVSMLL---PLAIV 112 (896)
Q Consensus 46 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~~f~~~~n~~~l~~~il~~~~~--~~--------~~~~~~~~---~l~~v 112 (896)
+...|+.+||+|.++.++...++ +.|++||+.+++++|+++++++++.. .+ ..|+..++ +++++
T Consensus 65 ev~~r~~~yG~N~l~~~~~~s~~---~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~ 141 (941)
T TIGR01517 65 TLERREKVYGKNELPEKPPKSFL---QIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILV 141 (941)
T ss_pred HHHHHHHHhCCCCCCCCCCCCHH---HHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHH
Confidence 45668889999999999876544 78999999999999999999998741 01 13444332 23333
Q ss_pred hhHHHHHHHHHHHHHhcchhhhccceEEEEeCCCeEEEeecccCccCcEEEeccCCcCCceEEEEeecCCCceEEEEecc
Q 002656 113 VGVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMN 192 (896)
Q Consensus 113 l~i~~~~~~~~d~~r~k~~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~~lL~ss~~~G~~~Vdes~ 192 (896)
++++++.++.+++..++.++..++.+++|+ |||++++|++++|+|||||.|++||.||||++|++++ .+.||||+
T Consensus 142 ~~i~~~~e~~~~~~~~~l~~~~~~~~~~Vi-RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~----~l~VdES~ 216 (941)
T TIGR01517 142 VLVTAVNDYKKELQFRQLNREKSAQKIAVI-RGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGL----SLEIDESS 216 (941)
T ss_pred hHHHHHHHHHHHHHHHHHHhccCCCceEEE-ECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcC----cEEEEecc
Confidence 445555555555555554444556789999 8999999999999999999999999999999999943 49999999
Q ss_pred CCCCCcceeecccccCCCCCchhhhccceEEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeeccceeecCCeEEEEEE
Q 002656 193 LDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVI 272 (896)
Q Consensus 193 LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~g~Vi 272 (896)
|||||.|+.|.+++. ...|+||.+.+|. +.++|+
T Consensus 217 LTGES~pv~K~~~~~-------------------------n~v~~GT~v~~G~---------------------~~~iV~ 250 (941)
T TIGR01517 217 ITGESDPIKKGAPKD-------------------------SFLLSGTVVNEGS---------------------GRMLVT 250 (941)
T ss_pred cCCCCCcccccCCCC-------------------------ceEEeCCeEEeeE---------------------EEEEEE
Confidence 999999999986432 1347777777776 999999
Q ss_pred Eeccccceee---ccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheee-cccCCCccccCCCCCCcccCCCCC
Q 002656 273 FTGHDSKVMQ---NATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKI-NYQTPQWWYLKPKETDVYFNPGKP 348 (896)
Q Consensus 273 ~tG~~Tk~~~---~~~~~~~k~s~l~~~~~~~~~~~~~~~ii~~~i~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 348 (896)
+||.+|.+++ +....+ +++++++.++++..++..+.++++++.++++.+.. ... .|. +.. .+...
T Consensus 251 ~tG~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~---~~~---~~~----~~~~~ 319 (941)
T TIGR01517 251 AVGVNSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRI---IRG---DGR----DTEED 319 (941)
T ss_pred EeCCCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---ccc---ccc----ccchh
Confidence 9999996543 444433 46799999999999998887777776666543210 000 000 000 00000
Q ss_pred chhHHHHHHHHHHHhccccccchhhhHHHHHHHHHHHHhhccccccCCCCCCceeecccccccccceeEEEecCCCcccc
Q 002656 349 LVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTC 428 (896)
Q Consensus 349 ~~~~~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~ 428 (896)
.......|.+++.+++.+||++|++++++....++.++ +++++++|+++.+|.||++++||||||||||+
T Consensus 320 ~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~m----------ak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~ 389 (941)
T TIGR01517 320 AQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKM----------MKDNNLVRHLAACETMGSATAICSDKTGTLTQ 389 (941)
T ss_pred hHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHH----------HhCCCEEechHHhhhccCceEEEEcCcCceee
Confidence 12334578889999999999999999999999988888 88999999999999999999999999999999
Q ss_pred cceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhcccccCCCCccccccccccCCCCccccccCCCcccccc
Q 002656 429 NQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSR 508 (896)
Q Consensus 429 n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (896)
|+|.+.+++.++..|.....
T Consensus 390 n~m~v~~~~~~~~~~~~~~~------------------------------------------------------------ 409 (941)
T TIGR01517 390 NVMSVVQGYIGEQRFNVRDV------------------------------------------------------------ 409 (941)
T ss_pred ceEEEEEEEEecceEecCcc------------------------------------------------------------
Confidence 99999999875543321100
Q ss_pred ccccCCCCCCChHHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCC
Q 002656 509 LMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKG 588 (896)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~ 588 (896)
. ... +....+++...+.||+..+...++ ....+..++|+|.||+++++..|.....
T Consensus 410 -~-----~~~-~~~~~~~l~~~~~~~s~~~~~~~~-~~~~~~~g~p~e~All~~~~~~~~~~~~---------------- 465 (941)
T TIGR01517 410 -L-----RNV-PKHVRNILVEGISLNSSSEEVVDR-GGKRAFIGSKTECALLGFLLLLGRDYQE---------------- 465 (941)
T ss_pred -c-----ccC-CHHHHHHHHHHHHhCCCCccccCC-CCccccCCCccHHHHHHHHHHcCCCHHH----------------
Confidence 0 000 012334454455555544322111 1123456899999999999887743211
Q ss_pred CCceeEEEEeeeecCCCCCeeEEEEEEcCCCcEEEEEcccchhhhHhhhc----ccc-----ccHHHHHHHHHHHHhcCC
Q 002656 589 QPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSK----NGR-----MYEEATTKLLNEYGEAGL 659 (896)
Q Consensus 589 ~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~----~~~-----~~~~~~~~~~~~~~~~G~ 659 (896)
....|++++.+||+|.||||+++++.+++++++|+|||||.|+++|+. ++. +.++.+.+.+++|+.+|+
T Consensus 466 --~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~ 543 (941)
T TIGR01517 466 --VRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRCADVIEPLASDAL 543 (941)
T ss_pred --HHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCC
Confidence 124577888999999999999999987788999999999999999974 111 134667888999999999
Q ss_pred eEEEEEEEeCCHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHhhhcccEEEEeeeeccccCCChHHHHHHHHHcCCeEEE
Q 002656 660 RTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWV 739 (896)
Q Consensus 660 r~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~aGIkv~m 739 (896)
||+++|||+++.+++..| +..|++|+|+|+++++||+|++++++|+.|+++||++||
T Consensus 544 Rvl~~A~~~~~~~~~~~~-----------------------~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~m 600 (941)
T TIGR01517 544 RTICLAYRDFAPEEFPRK-----------------------DYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRM 600 (941)
T ss_pred EEEEEEEEecCccccccc-----------------------cccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEE
Confidence 999999999876543221 234789999999999999999999999999999999999
Q ss_pred EcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCceEEEEeCchhhh
Q 002656 740 LTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAY 819 (896)
Q Consensus 740 lTGD~~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~ 819 (896)
+|||++.||.+||++|||.+++. .+++|+++..
T Consensus 601 iTGD~~~tA~~iA~~~GI~~~~~-----------------------------------------------~vi~G~~~~~ 633 (941)
T TIGR01517 601 VTGDNIDTAKAIARNCGILTFGG-----------------------------------------------LAMEGKEFRR 633 (941)
T ss_pred ECCCChHHHHHHHHHcCCCCCCc-----------------------------------------------eEeeHHHhhh
Confidence 99999999999999999986431 2788888887
Q ss_pred hcchhHHHHHHHHhhhcCceEEEeCCcccHHHHHHHHhccCCCEEEEEcCChhhHHHHHHCCccEEE--eCccccccC
Q 002656 820 ALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI--SGVEGMQVG 895 (896)
Q Consensus 820 ~l~~~~~~~~~~l~~~~~~vv~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~~L~~AdVGI~i--sg~eg~qaa 895 (896)
+.++++...+. +..||||++|+||.++|+.+|+ .|++|+|||||+||+|||++|||||+| +|+|++++|
T Consensus 634 l~~~el~~~i~------~~~Vfar~sPe~K~~iV~~lq~-~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~a 704 (941)
T TIGR01517 634 LVYEEMDPILP------KLRVLARSSPLDKQLLVLMLKD-MGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEA 704 (941)
T ss_pred CCHHHHHHHhc------cCeEEEECCHHHHHHHHHHHHH-CCCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHh
Confidence 76655554332 3469999999999999999998 899999999999999999999999988 588865443
No 11
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5e-89 Score=759.95 Aligned_cols=621 Identities=22% Similarity=0.306 Sum_probs=492.2
Q ss_pred CCcCCCCCCCceeeccccchhhhhHHHHHHHhhhHHHHHHHHHHHHhccc-----CCCCCCcccccch---hhhhhHHHH
Q 002656 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP-----LSPFSPVSMLLPL---AIVVGVSMA 118 (896)
Q Consensus 47 ~~~~~~~~g~N~i~~~k~~~~~flp~~l~~~f~~~~n~~~l~~~il~~~~-----~~~~~~~~~~~~l---~~vl~i~~~ 118 (896)
...|+.-||.|.++..+...|+ ..+|+.|+...-+++.+++++++.. ..+.+|+....++ +.|++++++
T Consensus 125 l~~Rr~~fG~N~~p~k~~K~Fl---~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~ 201 (1034)
T KOG0204|consen 125 LERRRKIFGSNTYPEKPPKGFL---RFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAV 201 (1034)
T ss_pred HHHHHHhcCCCCCCCCCCccHH---HHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeec
Confidence 3457788999999999887655 7799999999999999999999864 2234576654443 344455666
Q ss_pred HHHHHHHHHhcchhhhccceEEEEeCCCeEEEeecccCccCcEEEeccCCcCCceEEEEeecCCCceEEEEeccCCCCCc
Q 002656 119 KEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETN 198 (896)
Q Consensus 119 ~~~~~d~~r~k~~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~~lL~ss~~~G~~~Vdes~LtGEs~ 198 (896)
.++-++.+=++.+++..+.++.|+ |||+.++|+..||+||||+.|+.||.+||||+++++.+ +.||||+|||||+
T Consensus 202 nDy~qe~QF~~L~~~k~~~k~~Vi-R~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~----L~iDESSlTGESd 276 (1034)
T KOG0204|consen 202 NDYRQELQFRKLQKEKRNIKFQVI-RGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNS----LKIDESSLTGESD 276 (1034)
T ss_pred chhHHhhhhhhhhhhhhceEEEEE-ECCEEEEEEEeeeeeccEEEeecCCccccceEEEeccc----eeEecccccCCCc
Confidence 555555554555555667899999 89999999999999999999999999999999999765 9999999999999
Q ss_pred ceeecccccCCCCCchhhhccceEEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeeccceeecCCeEEEEEEEecccc
Q 002656 199 LKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDS 278 (896)
Q Consensus 199 ~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~g~Vi~tG~~T 278 (896)
++.|.+... -+.++||.+++|. +.++|+.+|++|
T Consensus 277 ~v~k~~~~d-------------------------PfLlSGTkv~eGs---------------------gkMlVTaVGmnt 310 (1034)
T KOG0204|consen 277 HVQKSLDKD-------------------------PFLLSGTKVMEGS---------------------GKMLVTAVGMNT 310 (1034)
T ss_pred ceeccCCCC-------------------------CeEeecceeecCc---------------------ceEEEEEeeecc
Confidence 999976422 2678999999998 999999999999
Q ss_pred ce---eeccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeec--c-cCC-Cc-cccCCCCCCcccCCCCCch
Q 002656 279 KV---MQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKIN--Y-QTP-QW-WYLKPKETDVYFNPGKPLV 350 (896)
Q Consensus 279 k~---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~ii~~~i~~i~~~~~~~--~-~~~-~~-~~~~~~~~~~~~~~~~~~~ 350 (896)
.. |.........+||+|-++++++..+..+.++++++++++..+..- . ..+ .. |- .......
T Consensus 311 ~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~----------~~~~~~~ 380 (1034)
T KOG0204|consen 311 QWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTT----------WSDEYIQ 380 (1034)
T ss_pred hHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCcc----------ccHHHHH
Confidence 64 444445555789999999999999988888888877776554211 0 000 00 10 0111233
Q ss_pred hHHHHHHHHHHHhccccccchhhhHHHHHHHHHHHHhhccccccCCCCCCceeecccccccccceeEEEecCCCcccccc
Q 002656 351 PGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQ 430 (896)
Q Consensus 351 ~~~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~ 430 (896)
.++..|..++.+++.++|.+||+++++...+++.+| .+-+.++|.++++|.+|....||+|||||||.|.
T Consensus 381 ~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkM----------mkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~ 450 (1034)
T KOG0204|consen 381 EFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKM----------MKDNNLVRHLDACETMGSATAICSDKTGTLTTNR 450 (1034)
T ss_pred HHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHH----------hcchhHHHHhHHHhhcCCceEEEecCcCceEeee
Confidence 444566677888999999999999999999999988 4455779999999999999999999999999999
Q ss_pred eEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhcccccCCCCccccccccccCCCCccccccCCCcccccccc
Q 002656 431 MDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLM 510 (896)
Q Consensus 431 m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (896)
|++.+.++++..|..+... .
T Consensus 451 MtVV~~~~~~~~~k~~~~~-~----------------------------------------------------------- 470 (1034)
T KOG0204|consen 451 MTVVQSYIGSEHYKVNSPK-S----------------------------------------------------------- 470 (1034)
T ss_pred EEEEeeeeccccccccCcc-c-----------------------------------------------------------
Confidence 9999999988887533211 0
Q ss_pred ccCCCCCCChHHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCC
Q 002656 511 DGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQP 590 (896)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~ 590 (896)
..-.......++.+++...+.....++..+....+.+||.|.||+.|+..+|.+|..
T Consensus 471 -----~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~------------------ 527 (1034)
T KOG0204|consen 471 -----SNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQD------------------ 527 (1034)
T ss_pred -----ccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHh------------------
Confidence 000112233455566654444333334444455567999999999999999987744
Q ss_pred ceeEEEEeeeecCCCCCeeEEEEEEcCCCcEEEEEcccchhhhHhhhc----c------ccccHHHHHHHHHHHHhcCCe
Q 002656 591 VEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSK----N------GRMYEEATTKLLNEYGEAGLR 660 (896)
Q Consensus 591 ~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~----~------~~~~~~~~~~~~~~~~~~G~r 660 (896)
.+.+.++++++||+|.||||+++++.+++..++|+|||.|.++..|.. + +++.+..++..++.|+.+|+|
T Consensus 528 ~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LR 607 (1034)
T KOG0204|consen 528 VRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLR 607 (1034)
T ss_pred hcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhh
Confidence 246778899999999999999999988877349999999999999976 1 223455788899999999999
Q ss_pred EEEEEEEeCCHH--HHHHHHHHHHHHHhhhccCHHHHHHHHHHhhhcccEEEEeeeeccccCCChHHHHHHHHHcCCeEE
Q 002656 661 TLALAYKQLDES--EYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIW 738 (896)
Q Consensus 661 ~l~~A~k~l~~~--e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~aGIkv~ 738 (896)
|+|+|||+.... +..+|.. .+..+.+|+++|++||+||+|||||++|+.|++|||+|.
T Consensus 608 ti~lAy~df~~~~~~~~~~~~--------------------~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVR 667 (1034)
T KOG0204|consen 608 TICLAYRDFVAGPDEEPSWDN--------------------EELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVR 667 (1034)
T ss_pred eeeEEeeccccCCCCCCCccc--------------------cccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEE
Confidence 999999995433 1112211 135578999999999999999999999999999999999
Q ss_pred EEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCceEEEEeCchhh
Q 002656 739 VLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLA 818 (896)
Q Consensus 739 mlTGD~~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~ 818 (896)
|+||||..||.+||.+|||+.++.. -++++|+.|.
T Consensus 668 MVTGDNI~TAkAIA~eCGILt~~~d---------------------------------------------~~~lEG~eFr 702 (1034)
T KOG0204|consen 668 MVTGDNINTAKAIARECGILTPGGD---------------------------------------------FLALEGKEFR 702 (1034)
T ss_pred EEeCCcHHHHHHHHHHcccccCCCc---------------------------------------------cceecchhhh
Confidence 9999999999999999999987643 2478888898
Q ss_pred hhcchhHHHHHHHHhhhcCceEEEeCCcccHHHHHHHHhccCCCEEEEEcCChhhHHHHHHCCccE--EEeCccccccCC
Q 002656 819 YALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGI--GISGVEGMQVGT 896 (896)
Q Consensus 819 ~~l~~~~~~~~~~l~~~~~~vv~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~~L~~AdVGI--~isg~eg~qaa~ 896 (896)
.+.+++..+...++. |.||.+|.+|..+|+.+++ .|++|+++|||+||+|||++||||+ ||+|+|+...||
T Consensus 703 ~~s~ee~~~i~pkl~------VlARSSP~DK~lLVk~L~~-~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaS 775 (1034)
T KOG0204|consen 703 ELSQEERDKIWPKLR------VLARSSPNDKHLLVKGLIK-QGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEAS 775 (1034)
T ss_pred hcCHHHHHhhhhhhe------eeecCCCchHHHHHHHHHh-cCcEEEEecCCCCCchhhhhcccchhccccchhhhhhhC
Confidence 887777777776664 9999999999999999998 8999999999999999999999999 559999887664
No 12
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=5.5e-88 Score=829.37 Aligned_cols=637 Identities=23% Similarity=0.262 Sum_probs=475.5
Q ss_pred HHHHhhhHHHHHHHHHHHHhccc-CCC------CCCcccccchhhhhhHHHHHHHHHHHHHhcchhhhc---cceEEEEe
Q 002656 74 LFEQFNRVANIYFLIAALLSVTP-LSP------FSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDKEVN---ARKVSVHV 143 (896)
Q Consensus 74 l~~~f~~~~n~~~l~~~il~~~~-~~~------~~~~~~~~~l~~vl~i~~~~~~~~d~~r~k~~~~~n---~~~~~V~~ 143 (896)
+++||++|++++++++++++++. +.+ ..|+..++ ++++++++++..++++++..++.+.+. ..+++|+
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~-Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~Vi- 78 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFV-ILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVL- 78 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEE-
Confidence 47899999999999999999975 221 23444444 446667788888999998888766554 4789999
Q ss_pred CCCeEEEeecccCccCcEEEeccCCcCCceEEEEeecCCCceEEEEeccCCCCCcceeecccccCCCCCchhhhccceEE
Q 002656 144 GNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGT 223 (896)
Q Consensus 144 r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~~lL~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~ 223 (896)
|||++++|++++|+|||||.|++||.||||++|+++++ |.||||+|||||.|+.|.+.....
T Consensus 79 Rdg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~----l~VdeS~LTGES~pv~K~~~~~~~-------------- 140 (917)
T TIGR01116 79 RDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKT----LRVDQSILTGESVSVNKHTESVPD-------------- 140 (917)
T ss_pred ECCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecc----eEEEcccccCCCCcccccccccCc--------------
Confidence 89999999999999999999999999999999999653 899999999999999998753210
Q ss_pred EEeeCCCCCceeEEEEEEECCeeeecCCCCeeeccceeecCCeEEEEEEEeccccceee---ccCCCCCCcCHHHHHHHH
Q 002656 224 VKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQ---NATTSPSKRSGIEKKMDK 300 (896)
Q Consensus 224 i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~g~Vi~tG~~Tk~~~---~~~~~~~k~s~l~~~~~~ 300 (896)
....+.+.+|++++||.+.+ |++.|+|++||.+|++++ +....+.+++++++++++
T Consensus 141 --------------------~~~~~~~~~n~l~~GT~v~~-G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~ 199 (917)
T TIGR01116 141 --------------------ERAVNQDKKNMLFSGTLVVA-GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDE 199 (917)
T ss_pred --------------------cccCcccccceeeeCCEEec-ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHH
Confidence 00112345577777777774 669999999999998875 455667778999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhee-ecccCCCccccCCCCCCcccCCCCCchhHHHHHHHHHHHhccccccchhhhHHHHH
Q 002656 301 IIFILFAILVLISLISSIGFAVK-INYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVK 379 (896)
Q Consensus 301 ~~~~~~~~~ii~~~i~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~l~~~~ 379 (896)
+..+++.+.++++++.++++..+ ........|+ ...+..+..++.+++.+||++||++++++.
T Consensus 200 ~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l 263 (917)
T TIGR01116 200 FGELLSKVIGLICILVWVINIGHFNDPALGGGWI----------------QGAIYYFKIAVALAVAAIPEGLPAVITTCL 263 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccchhH----------------HHHHHHHHHHHhhhhhccccccHHHHHHHH
Confidence 99999888877777766654321 1000000121 122345667788999999999999999999
Q ss_pred HHHHHHHhhccccccCCCCCCceeecccccccccceeEEEecCCCcccccceEEEEEEEcCeeccCCchHHHHHHHHhhh
Q 002656 380 FLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMA 459 (896)
Q Consensus 380 ~~~~~~i~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~ 459 (896)
.+++.+| +++++++|+++.+|+||++++||||||||||+|+|++.+++..+..+.....
T Consensus 264 ~~~~~~m----------~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~----------- 322 (917)
T TIGR01116 264 ALGTRKM----------AKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNE----------- 322 (917)
T ss_pred HHHHHHH----------HHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccce-----------
Confidence 9999998 7889999999999999999999999999999999999999876543210000
Q ss_pred hchhhhhhhhhcccccCCCCccccccccccCCCCccccccCCCccccccccccCCCCCCChHHHHHHHHHHhhcceeeec
Q 002656 460 IDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPE 539 (896)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~C~~~~~~ 539 (896)
+...+ ..+...+....+..............++.++++||++...
T Consensus 323 ---------------------~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~ 367 (917)
T TIGR01116 323 ---------------------FCVTG--------------TTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLD 367 (917)
T ss_pred ---------------------EEecC--------------CccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeee
Confidence 00000 0000000000000000011234566788999999998765
Q ss_pred ccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEeeeecCCCCCeeEEEEEEcCCC
Q 002656 540 LNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDG 619 (896)
Q Consensus 540 ~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~ 619 (896)
.++..+.+. ..++|+|.||++++.+.|+....+....+.....+.. ......|++++.+||+|+||||||++++ ++
T Consensus 368 ~~~~~~~~~-~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~pF~s~rK~msviv~~-~~ 443 (917)
T TIGR01116 368 FNERKGVYE-KVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCN--SVWNDKFKKLATLEFSRDRKSMSVLCKP-ST 443 (917)
T ss_pred ccccCCcee-eccChhHHHHHHHHHHcCCCchhcccccccccccchh--HHHHhhcceeeecccChhhCeEEEEEee-CC
Confidence 433222221 2489999999999999998766544333222111100 0013568899999999999999999986 46
Q ss_pred cEEEEEcccchhhhHhhhcc----c------cccHHHHHHHHHHHHh-cCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhh
Q 002656 620 QILLLCKGADSIIFDRLSKN----G------RMYEEATTKLLNEYGE-AGLRTLALAYKQLDESEYSAWNSEFQKAKSSI 688 (896)
Q Consensus 620 ~~~l~~KGa~~~i~~~~~~~----~------~~~~~~~~~~~~~~~~-~G~r~l~~A~k~l~~~e~~~~~~~~~~a~~~~ 688 (896)
++++|+|||||.|+++|+.. + ++.++.+.+++++|++ +|+|||++|||.++.++.. +..
T Consensus 444 ~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~-~~~--------- 513 (917)
T TIGR01116 444 GNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREE-DLL--------- 513 (917)
T ss_pred cEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccc-ccc---------
Confidence 78999999999999999741 1 2345678889999999 9999999999998764321 100
Q ss_pred ccCHHHHHHHHHHhhhcccEEEEeeeeccccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEe
Q 002656 689 GADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICIT 768 (896)
Q Consensus 689 ~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~~~~~~~~i~ 768 (896)
.+. ...+.+|+||+|+|+++++||+|++++++|+.|+++||++||+|||+.+||.++|+++||..++.+.
T Consensus 514 -~~~-----~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v---- 583 (917)
T TIGR01116 514 -SDP-----ANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDV---- 583 (917)
T ss_pred -ccc-----hhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccc----
Confidence 010 1225679999999999999999999999999999999999999999999999999999998654221
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcchhHHHHHHHHhhhcCceEEEeCCccc
Q 002656 769 ALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQ 848 (896)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vv~~r~sP~q 848 (896)
...+++|+.|..+.++++.. ..++.+||||++|+|
T Consensus 584 ---------------------------------------~~~~~~g~~l~~~~~~~~~~------~~~~~~v~ar~~P~~ 618 (917)
T TIGR01116 584 ---------------------------------------TFKSFTGREFDEMGPAKQRA------ACRSAVLFSRVEPSH 618 (917)
T ss_pred ---------------------------------------cceeeeHHHHhhCCHHHHHH------hhhcCeEEEecCHHH
Confidence 11357777776654433222 234567999999999
Q ss_pred HHHHHHHHhccCCCEEEEEcCChhhHHHHHHCCccEEE-eCccccc
Q 002656 849 KALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI-SGVEGMQ 893 (896)
Q Consensus 849 K~~iV~~lk~~~g~~vl~iGDG~ND~~~L~~AdVGI~i-sg~eg~q 893 (896)
|.++|+.+|+ .|++|+|+|||+||+|||++|||||++ +|+|+.+
T Consensus 619 K~~iV~~lq~-~g~~va~iGDG~ND~~alk~AdVGia~g~g~~~ak 663 (917)
T TIGR01116 619 KSELVELLQE-QGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAK 663 (917)
T ss_pred HHHHHHHHHh-cCCeEEEecCCcchHHHHHhCCeeEECCCCcHHHH
Confidence 9999999997 899999999999999999999999999 7777665
No 13
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=3.8e-86 Score=805.13 Aligned_cols=580 Identities=20% Similarity=0.248 Sum_probs=454.7
Q ss_pred cCCcCCCCCCCceeeccccchhhhhHHHHHHHhhhHHHHHHHHHHHHhcccCCCCCCcccccchhhhhhHHHHHHHHHHH
Q 002656 46 MHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDW 125 (896)
Q Consensus 46 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~~f~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~~~~~~~d~ 125 (896)
+...|+.+||+|.++.++.+.++ +.|++||+.|++++++++++++++. ..|. ..+.++++++++.+.++++++
T Consensus 72 ea~~r~~~~G~N~l~~~~~~s~~---~~~~~~~~~p~~~lL~~aa~ls~~~---~~~~-~a~~I~~iv~i~~~i~~~qe~ 144 (902)
T PRK10517 72 EVESAREQHGENELPAQKPLPWW---VHLWVCYRNPFNILLTILGAISYAT---EDLF-AAGVIALMVAISTLLNFIQEA 144 (902)
T ss_pred HHHHHHHhcCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHHH---ccHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 34568889999999999887554 7899999999999999999999873 3344 444455677788888899999
Q ss_pred HHhcchhhh---ccceEEEEeCC------CeEEEeecccCccCcEEEeccCCcCCceEEEEeecCCCceEEEEeccCCCC
Q 002656 126 RRFMQDKEV---NARKVSVHVGN------GVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGE 196 (896)
Q Consensus 126 ~r~k~~~~~---n~~~~~V~~r~------g~~~~i~~~~L~vGDII~l~~ge~vPaD~~lL~ss~~~G~~~Vdes~LtGE 196 (896)
+..++.+.+ ...+++|+ || |++++|++++|+|||||.|++||.||||++|+++++ +.||||+||||
T Consensus 145 ra~~~~~~L~~l~~~~a~Vi-R~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~----l~VDES~LTGE 219 (902)
T PRK10517 145 RSTKAADALKAMVSNTATVL-RVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARD----LFVAQASLTGE 219 (902)
T ss_pred HHHHHHHHHHhhCCCeEEEE-ECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCc----eEEEecCcCCC
Confidence 888765544 45789999 77 789999999999999999999999999999999543 79999999999
Q ss_pred CcceeecccccCCCCCchhhhccceEEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeeccceeecCCeEEEEEEEecc
Q 002656 197 TNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGH 276 (896)
Q Consensus 197 s~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~g~Vi~tG~ 276 (896)
|.|+.|.+++..... .+..+.+...|+||.+.+|. +.++|++||.
T Consensus 220 S~PV~K~~~~~~~~~--------------~~~~~~~n~vfaGT~V~~G~---------------------~~~vV~atG~ 264 (902)
T PRK10517 220 SLPVEKFATTRQPEH--------------SNPLECDTLCFMGTNVVSGT---------------------AQAVVIATGA 264 (902)
T ss_pred CCceecccccccccc--------------cCccccccceeeCceEeeee---------------------EEEEEEEecc
Confidence 999999987532100 00001122346666666555 9999999999
Q ss_pred ccceeecc---CCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCCcccCCCCCchhHH
Q 002656 277 DSKVMQNA---TTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGL 353 (896)
Q Consensus 277 ~Tk~~~~~---~~~~~k~s~l~~~~~~~~~~~~~~~ii~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (896)
+|.+++.. .....+++++++.++++..++..+.++++.+.++++.+... .| .
T Consensus 265 ~T~~GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~~-----~~--------------------~ 319 (902)
T PRK10517 265 NTWFGQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTKG-----DW--------------------W 319 (902)
T ss_pred ccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcC-----CH--------------------H
Confidence 99775543 35556789999999999998888887777766655432111 12 2
Q ss_pred HHHHHHHHHhccccccchhhhHHHHHHHHHHHHhhccccccCCCCCCceeecccccccccceeEEEecCCCcccccceEE
Q 002656 354 AHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDF 433 (896)
Q Consensus 354 ~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~ 433 (896)
..|.+++.+++.+||++||++++++...++.++ +++++++|+++.+|.||++|+||||||||||+|+|.+
T Consensus 320 ~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~m----------ak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V 389 (902)
T PRK10517 320 EAALFALSVAVGLTPEMLPMIVTSTLARGAVKL----------SKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVL 389 (902)
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH----------HhCCcEEecchhhhhccCCCEEEecCCCccccceEEE
Confidence 477888999999999999999999999988888 8999999999999999999999999999999999999
Q ss_pred EEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhcccccCCCCccccccccccCCCCccccccCCCccccccccccC
Q 002656 434 LKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGN 513 (896)
Q Consensus 434 ~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (896)
.++.. ..+..
T Consensus 390 ~~~~~---~~~~~------------------------------------------------------------------- 399 (902)
T PRK10517 390 ENHTD---ISGKT------------------------------------------------------------------- 399 (902)
T ss_pred EEEec---CCCCC-------------------------------------------------------------------
Confidence 87531 00000
Q ss_pred CCCCCChHHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCcee
Q 002656 514 WLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVER 593 (896)
Q Consensus 514 ~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~ 593 (896)
..+++...++|.... . ..+||.|.|++.++...+.. ....
T Consensus 400 ---------~~~ll~~a~l~~~~~----~-------~~~~p~d~All~~a~~~~~~--------------------~~~~ 439 (902)
T PRK10517 400 ---------SERVLHSAWLNSHYQ----T-------GLKNLLDTAVLEGVDEESAR--------------------SLAS 439 (902)
T ss_pred ---------HHHHHHHHHhcCCcC----C-------CCCCHHHHHHHHHHHhcchh--------------------hhhh
Confidence 012344444443221 0 14799999999998753210 0134
Q ss_pred EEEEeeeecCCCCCeeEEEEEEcCCCcEEEEEcccchhhhHhhhcc---c------cccHHHHHHHHHHHHhcCCeEEEE
Q 002656 594 EFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKN---G------RMYEEATTKLLNEYGEAGLRTLAL 664 (896)
Q Consensus 594 ~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---~------~~~~~~~~~~~~~~~~~G~r~l~~ 664 (896)
.|+.++.+||+|.||||++++++.++.+.+++||||+.|+++|+.. + ++..+.+.+..++++.+|+|++++
T Consensus 440 ~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlav 519 (902)
T PRK10517 440 RWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAV 519 (902)
T ss_pred cCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 5777888999999999999998877888999999999999999741 1 123556777788999999999999
Q ss_pred EEEeCCHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHhhhcccEEEEeeeeccccCCChHHHHHHHHHcCCeEEEEcCCc
Q 002656 665 AYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDK 744 (896)
Q Consensus 665 A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~aGIkv~mlTGD~ 744 (896)
|||+++.++. .+ + ...|+||+|+|+++|+||+|++++++|+.|+++||+|+|+|||+
T Consensus 520 A~k~~~~~~~-~~-------------~---------~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~ 576 (902)
T PRK10517 520 ATKYLPAREG-DY-------------Q---------RADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDS 576 (902)
T ss_pred EEecCCcccc-cc-------------c---------cccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCC
Confidence 9998865321 00 0 11368999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcchh
Q 002656 745 METAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDD 824 (896)
Q Consensus 745 ~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~ 824 (896)
+.||.+||+++||... -+++|..|+.+-+++
T Consensus 577 ~~tA~~IA~~lGI~~~-------------------------------------------------~v~~G~el~~l~~~e 607 (902)
T PRK10517 577 ELVAAKVCHEVGLDAG-------------------------------------------------EVLIGSDIETLSDDE 607 (902)
T ss_pred HHHHHHHHHHcCCCcc-------------------------------------------------CceeHHHHHhCCHHH
Confidence 9999999999999421 167888887665544
Q ss_pred HHHHHHHHhhhcCceEEEeCCcccHHHHHHHHhccCCCEEEEEcCChhhHHHHHHCCccEEE-eCcccc-ccCC
Q 002656 825 MKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI-SGVEGM-QVGT 896 (896)
Q Consensus 825 ~~~~~~~l~~~~~~vv~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~~L~~AdVGI~i-sg~eg~-qaa~ 896 (896)
+..... . ..||||++|+||.++|+.+|+ .|++|+|+|||+||+|||++|||||+| +|+|.. .|||
T Consensus 608 l~~~~~----~--~~VfAr~sPe~K~~IV~~Lq~-~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAkeaAD 674 (902)
T PRK10517 608 LANLAE----R--TTLFARLTPMHKERIVTLLKR-EGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAAD 674 (902)
T ss_pred HHHHHh----h--CcEEEEcCHHHHHHHHHHHHH-CCCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHHHhCC
Confidence 444332 2 239999999999999999998 899999999999999999999999999 677744 4443
No 14
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.3e-86 Score=743.81 Aligned_cols=691 Identities=21% Similarity=0.273 Sum_probs=500.7
Q ss_pred CcCCCCCCCceeeccccchhhhhHHHHHHHhhhHHHHHHHHHHHHhcccCCCCCCcccccchhhhhhHHHHHHHHHHHHH
Q 002656 48 KKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRR 127 (896)
Q Consensus 48 ~~~~~~~g~N~i~~~k~~~~~flp~~l~~~f~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~~~~~~~d~~r 127 (896)
..|+.-||+|.|..+..+.+ ..|+.+..+|+++|..+..++|.. .+++.++..++++.+.+++...+|..+.
T Consensus 167 ~~r~~iyG~N~i~l~ik~i~----~iLv~EvL~PfYlFQ~fSv~lW~~----d~Y~~YA~cI~iisv~Si~~sv~e~r~q 238 (1140)
T KOG0208|consen 167 IDRRIIYGRNVISLPIKSIS----QILVKEVLNPFYLFQAFSVALWLA----DSYYYYAFCIVIISVYSIVLSVYETRKQ 238 (1140)
T ss_pred HhHHhhcCCceeeeecccHH----HHHHHhccchHHHHHhHHhhhhhc----ccchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 34677899999999998877 789999999999999999999987 5666777777777778888888888877
Q ss_pred hcchhhhcc--ceEEEEeCCCeEEEeecccCccCcEEEecc-CCcCCceEEEEeecCCCceEEEEeccCCCCCcceeecc
Q 002656 128 FMQDKEVNA--RKVSVHVGNGVFSYKPWEKIQVGDIVKVEK-DQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRA 204 (896)
Q Consensus 128 ~k~~~~~n~--~~~~V~~r~g~~~~i~~~~L~vGDII~l~~-ge~vPaD~~lL~ss~~~G~~~Vdes~LtGEs~~~~K~~ 204 (896)
.+..+.+-. ..|+|+ |+|.|++|.++||+||||+.+.+ +-..|||++|++ |.|.||||+|||||.|+.|.|
T Consensus 239 s~rlr~mv~~~~~V~V~-R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~-----g~civNEsmLTGESVPv~K~~ 312 (1140)
T KOG0208|consen 239 SIRLRSMVKFTCPVTVI-RDGFWETVDSSELVPGDILYIPPPGKIMPCDALLIS-----GDCIVNESMLTGESVPVTKTP 312 (1140)
T ss_pred HHHHHHHhcCCceEEEE-ECCEEEEEeccccccccEEEECCCCeEeecceEEEe-----CcEEeecccccCCcccccccC
Confidence 777776654 479999 89999999999999999999998 899999999999 779999999999999999999
Q ss_pred cccCCCCCchhhhccceEEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeeccceeecCCeEEEEEEEeccccceeecc
Q 002656 205 MEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNA 284 (896)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~g~Vi~tG~~Tk~~~~~ 284 (896)
.+.-.. .....+.+...+..+..|.||.++.-... -.+-+.++|++||..|..++..
T Consensus 313 l~~~~~--------~~~~~~~~~~~~~rh~lfcGT~vlq~r~~---------------~g~~v~a~V~RTGF~T~KGqLV 369 (1140)
T KOG0208|consen 313 LPMGTD--------SLDSITISMSTNSRHTLFCGTKVLQARAY---------------LGGPVLAMVLRTGFSTTKGQLV 369 (1140)
T ss_pred Cccccc--------cCcCeeechhhcCcceeeccceEEEeecC---------------CCCceEEEEEeccccccccHHH
Confidence 862110 01112333344556677999988843310 1234899999999999887777
Q ss_pred CCCC-CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCCcccCCCCCchhHHHHHHHHHHHh
Q 002656 285 TTSP-SKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILY 363 (896)
Q Consensus 285 ~~~~-~k~s~l~~~~~~~~~~~~~~~ii~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll 363 (896)
+..- .|..+++-.-|-+ .++.++.+++++.++...+..... + .+.-..+++++.++
T Consensus 370 RsilyPkP~~fkfyrds~--~fi~~l~~ia~~gfiy~~i~l~~~-------g--------------~~~~~iiirsLDli 426 (1140)
T KOG0208|consen 370 RSILYPKPVNFKFYRDSF--KFILFLVIIALIGFIYTAIVLNLL-------G--------------VPLKTIIIRSLDLI 426 (1140)
T ss_pred HhhcCCCCcccHHHHHHH--HHHHHHHHHHHHHHHHHhHhHHHc-------C--------------CCHHHHhhhhhcEE
Confidence 6532 2223333333322 233334444555544443321110 0 11124678899999
Q ss_pred ccccccchhhhHHHHHHHHHHHHhhccccccCCCCCCceeecccccccccceeEEEecCCCcccccceEEEEEEEcCee-
Q 002656 364 GYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTA- 442 (896)
Q Consensus 364 ~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~- 442 (896)
...+|++||.++++.......++ .+++|.|-+++.+...|++|++|||||||||++.+.+.++..-...
T Consensus 427 Ti~VPPALPAaltvG~~~a~~RL----------kkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~ 496 (1140)
T KOG0208|consen 427 TIVVPPALPAALTVGIIYAQSRL----------KKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNV 496 (1140)
T ss_pred EEecCCCchhhhhHHHHHHHHHH----------HhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccc
Confidence 99999999999999999888888 8999999999999999999999999999999999999988742211
Q ss_pred c-cCCchHHHHHHHHhhhhchhhhhhhhhcccccCCCCccccccccccCCCCccccccCCCccccccccccCCCCCCChH
Q 002656 443 Y-GVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVD 521 (896)
Q Consensus 443 y-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (896)
. +...... ..++. +.+. . ...+....
T Consensus 497 ~~~~~~~~~---------------~~~~~-------------------------------~~~~--~-----l~~~~~~~ 523 (1140)
T KOG0208|consen 497 DDGPELKVV---------------TEDSL-------------------------------QLFY--K-----LSLRSSSL 523 (1140)
T ss_pred cccchhhhh---------------hhhhc-------------------------------ccee--e-----ccccccCC
Confidence 0 0000000 00000 0000 0 00001111
Q ss_pred HHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEc--------CCeE---EEEecC---CCC
Q 002656 522 TLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRT--------QSSV---FIRERY---PPK 587 (896)
Q Consensus 522 ~~~~~~~~la~C~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~--------~~~~---~i~~~~---~~~ 587 (896)
....|..++|.||+....... ..++|.|.-+.++ .||.+.+.. .+++ .++... +..
T Consensus 524 ~~~~~~~a~atCHSL~~v~g~-------l~GDPLdlkmfe~---t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~ 593 (1140)
T KOG0208|consen 524 PMGNLVAAMATCHSLTLVDGT-------LVGDPLDLKMFES---TGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQS 593 (1140)
T ss_pred chHHHHHHHhhhceeEEeCCe-------eccCceeeeeeec---cceEEEeccccchhhhhhCCccCCEeCCCcccccCC
Confidence 134688999999988765332 2367877666553 566664421 0111 111111 000
Q ss_pred CCCceeEEEEeeeecCCCCCeeEEEEEEcC-CCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEE
Q 002656 588 GQPVEREFKILNLLDFTSKRKRMSVIVRDE-DGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAY 666 (896)
Q Consensus 588 ~~~~~~~~~il~~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~ 666 (896)
.+.....+-+++.+||+|.-+||||||.++ +.+..+|+|||||.|.+.|+++. ++..+.+.++.|+.+|+|++++|+
T Consensus 594 t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~t--vP~dy~evl~~Yt~~GfRVIAlA~ 671 (1140)
T KOG0208|consen 594 TECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPET--VPADYQEVLKEYTHQGFRVIALAS 671 (1140)
T ss_pred CcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCccc--CCccHHHHHHHHHhCCeEEEEEec
Confidence 111123799999999999999999999986 46789999999999999998764 788899999999999999999999
Q ss_pred EeCCHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHhhhcccEEEEeeeeccccCCChHHHHHHHHHcCCeEEEEcCCcHH
Q 002656 667 KQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKME 746 (896)
Q Consensus 667 k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ 746 (896)
|.++.. .|.+..+ ..| +.+|.||+|+|++.+|++||+.++.+|++|++|+|+++|+||||..
T Consensus 672 K~L~~~---~~~~~~~-------~~R--------d~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNll 733 (1140)
T KOG0208|consen 672 KELETS---TLQKAQK-------LSR--------DTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLL 733 (1140)
T ss_pred CccCcc---hHHHHhh-------ccH--------hhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchh
Confidence 999876 4544322 234 6789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccccccCceEEEEecCCch-hhHHHHHHHHHHHHHHHHHhhh---h-hhh----ccCCCCCceEEEEeCchh
Q 002656 747 TAINIGFACSLLRQGMKQICITALNSD-SVGKAAKEAVKDNILMQITNAS---Q-MIK----LERDPHAAYALIIEGKTL 817 (896)
Q Consensus 747 tA~~iA~~~gi~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~-~~~----~~~~~~~~~~lvi~G~~l 817 (896)
||+.+|++||++.+....+...-...+ ....+......++. .+..... . ... ........|.+.++|+.|
T Consensus 734 TaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f 812 (1140)
T KOG0208|consen 734 TAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQ-TQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTF 812 (1140)
T ss_pred eeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCc-cccCCCCccCccccCCccChhhhccceeEEEecCchh
Confidence 999999999999988777766544222 11000000000000 0000000 0 000 011245679999999999
Q ss_pred hhhcchhHHHHHHHHhhhcCceEEEeCCcccHHHHHHHHhccCCCEEEEEcCChhhHHHHHHCCccEEEeCccccccCC
Q 002656 818 AYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQVGT 896 (896)
Q Consensus 818 ~~~l~~~~~~~~~~l~~~~~~vv~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~~L~~AdVGI~isg~eg~qaa~ 896 (896)
..+. .+..+.+.++..+|. |||||+|.||+++|+.+|+ .|++|+|||||+||++||++|||||++|.+|++.||.
T Consensus 813 ~~i~-~~~~~l~~~Il~~~~--VfARMsP~qK~~Lie~lQk-l~y~VgfCGDGANDCgALKaAdvGISLSeaEASvAAp 887 (1140)
T KOG0208|consen 813 QVIL-EHFPELVPKILLKGT--VFARMSPDQKAELIEALQK-LGYKVGFCGDGANDCGALKAADVGISLSEAEASVAAP 887 (1140)
T ss_pred HHHH-hhcHHHHHHHHhcCe--EEeecCchhHHHHHHHHHh-cCcEEEecCCCcchhhhhhhcccCcchhhhhHhhcCc
Confidence 9988 444455555665555 9999999999999999998 8999999999999999999999999999999999983
No 15
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=1e-84 Score=798.80 Aligned_cols=602 Identities=20% Similarity=0.242 Sum_probs=464.2
Q ss_pred cCCcCCCCCCCceeeccccchhhhhHHHHHHHh-hhHHHHHHHHHHHHhcccCCCCCCcccccchhhhhhHHHHHHHHHH
Q 002656 46 MHKKRPLKYCTNYISTTKYNFFSYFPKALFEQF-NRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALED 124 (896)
Q Consensus 46 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~~f-~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~~~~~~~d 124 (896)
+..+|+.+||+|.++.++...++ +.|++|| ..|++++++++++++++. ..|...++ ++++++++.+..++++
T Consensus 29 ev~~r~~~~G~N~i~~~~~~s~~---~~~l~~~~~~~~~~~L~~aa~ls~~~---g~~~~~~~-i~~~i~~~~~i~~~qe 101 (884)
T TIGR01522 29 EASHRRAFHGWNEFDVEEDESLW---KKFLSQFVKNPLILLLIASAVISVFM---GNIDDAVS-ITLAILIVVTVGFVQE 101 (884)
T ss_pred HHHHHHHhcCCCcCCCCCCCCHH---HHHHHHHhhChHHHHHHHHHHHHHHH---cchhhHHH-HHhHHHHHHHHHHHHH
Confidence 34567889999999988755443 7899999 999999999999999874 34444443 4445566777888899
Q ss_pred HHHhcchhhhc---cceEEEEeCCCeEEEeecccCccCcEEEeccCCcCCceEEEEeecCCCceEEEEeccCCCCCccee
Q 002656 125 WRRFMQDKEVN---ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKV 201 (896)
Q Consensus 125 ~~r~k~~~~~n---~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~~lL~ss~~~G~~~Vdes~LtGEs~~~~ 201 (896)
++.+++.+.+. +.+++|+ |||++++|++++|+|||||.|++||.||||++|+++++ +.||||+|||||.|+.
T Consensus 102 ~~a~~~l~~L~~l~~~~~~Vi-Rdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~----l~VDES~LTGES~pv~ 176 (884)
T TIGR01522 102 YRSEKSLEALNKLVPPECHLI-REGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVD----LSIDESNLTGETTPVS 176 (884)
T ss_pred HHHHHHHHHHhccCCCeeEEE-ECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCc----eEEEcccccCCCccee
Confidence 98888776665 4789999 89999999999999999999999999999999999543 8999999999999999
Q ss_pred ecccccCCCCCchhhhccceEEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeeccceeecCCeEEEEEEEecccccee
Q 002656 202 KRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVM 281 (896)
Q Consensus 202 K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~g~Vi~tG~~Tk~~ 281 (896)
|.+++..... ...........|+||.+.+|. +.++|++||.+|.++
T Consensus 177 K~~~~~~~~~-------------~~~~~~~~n~v~~GT~v~~G~---------------------~~~~V~~tG~~T~~g 222 (884)
T TIGR01522 177 KVTAPIPAAT-------------NGDLAERSNIAFMGTLVRCGH---------------------GKGIVVGTGSNTEFG 222 (884)
T ss_pred cccccccccc-------------cccccccCceEEeCCEEEeee---------------------EEEEEEEecCccHHH
Confidence 9986532100 001112233456666666666 999999999999765
Q ss_pred ec---cCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCCcccCCCCCchhHHHHHHH
Q 002656 282 QN---ATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVT 358 (896)
Q Consensus 282 ~~---~~~~~~k~s~l~~~~~~~~~~~~~~~ii~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (896)
+. .......++++++.++++..++.++.++++++.+++..+. . ..| ...+..
T Consensus 223 ki~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~----~~~--------------------~~~~~~ 277 (884)
T TIGR01522 223 AVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWFQ-G----KDW--------------------LEMFTI 277 (884)
T ss_pred HHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-c----CCH--------------------HHHHHH
Confidence 54 3345556799999999999888776655554444332211 1 012 246778
Q ss_pred HHHHhccccccchhhhHHHHHHHHHHHHhhccccccCCCCCCceeecccccccccceeEEEecCCCcccccceEEEEEEE
Q 002656 359 ALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSV 438 (896)
Q Consensus 359 ~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i 438 (896)
++.+++.+||++||++++++...+..++ +++++++|+++.+|.||++++||||||||||+|+|.+.+++.
T Consensus 278 ~v~llv~aiP~~Lp~~vt~~l~~~~~r~----------ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~ 347 (884)
T TIGR01522 278 SVSLAVAAIPEGLPIIVTVTLALGVLRM----------SKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWT 347 (884)
T ss_pred HHHHHHHHccchHHHHHHHHHHHHHHHH----------hhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEe
Confidence 8899999999999999999999999988 899999999999999999999999999999999999999986
Q ss_pred cCeeccC-CchHHHHHHHHhhhhchhhhhhhhhcccccCCCCccccccccccCCCCccccccCCCccccccccccCCCCC
Q 002656 439 AGTAYGV-SPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKE 517 (896)
Q Consensus 439 ~~~~y~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (896)
.+..+.. .... . ...+.+..++. ....
T Consensus 348 ~~~~~~~~~~~~---------------------------------~-------------~~~~~~~~~~~------~~~~ 375 (884)
T TIGR01522 348 SDGLHTMLNAVS---------------------------------L-------------NQFGEVIVDGD------VLHG 375 (884)
T ss_pred cCceEeeccCCc---------------------------------c-------------CCCCccccccc------cccc
Confidence 5432210 0000 0 00000000000 0011
Q ss_pred CChHHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEE
Q 002656 518 PNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKI 597 (896)
Q Consensus 518 ~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i 597 (896)
..+..+.+++.+.++||+......+ + ...++|+|.||+++++..|+.. ....|+.
T Consensus 376 ~~~~~~~~~l~~~~l~~~~~~~~~~--~---~~~g~p~e~All~~~~~~~~~~--------------------~~~~~~~ 430 (884)
T TIGR01522 376 FYTVAVSRILEAGNLCNNAKFRNEA--D---TLLGNPTDVALIELLMKFGLDD--------------------LRETYIR 430 (884)
T ss_pred ccCHHHHHHHHHHhhhCCCeecCCC--C---CcCCChHHHHHHHHHHHcCcHh--------------------HHhhCcE
Confidence 1223456788889999988654221 1 1237899999999999877531 1245778
Q ss_pred eeeecCCCCCeeEEEEEEcC-CCcEEEEEcccchhhhHhhhcc----c------cccHHHHHHHHHHHHhcCCeEEEEEE
Q 002656 598 LNLLDFTSKRKRMSVIVRDE-DGQILLLCKGADSIIFDRLSKN----G------RMYEEATTKLLNEYGEAGLRTLALAY 666 (896)
Q Consensus 598 l~~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~----~------~~~~~~~~~~~~~~~~~G~r~l~~A~ 666 (896)
++.+||+|.||||+++++.+ ++++++|+|||||.|+.+|+.. + ++.++.+.+++++++.+|+|++++||
T Consensus 431 ~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~ 510 (884)
T TIGR01522 431 VAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFAS 510 (884)
T ss_pred EeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEE
Confidence 89999999999999999874 5778999999999999999641 1 22356677888999999999999999
Q ss_pred EeCCHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHhhhcccEEEEeeeeccccCCChHHHHHHHHHcCCeEEEEcCCcHH
Q 002656 667 KQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKME 746 (896)
Q Consensus 667 k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ 746 (896)
|.+ +.+|+|+|+++++||+|+|++++|+.|+++||+++|+|||+.+
T Consensus 511 ~~~----------------------------------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~ 556 (884)
T TIGR01522 511 GPE----------------------------------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQE 556 (884)
T ss_pred EcC----------------------------------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHH
Confidence 865 2589999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcchhHH
Q 002656 747 TAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMK 826 (896)
Q Consensus 747 tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~ 826 (896)
||.++|+++||...... +++|+.+...-++++.
T Consensus 557 tA~~ia~~~Gi~~~~~~-----------------------------------------------~v~g~~l~~~~~~~l~ 589 (884)
T TIGR01522 557 TAVSIARRLGMPSKTSQ-----------------------------------------------SVSGEKLDAMDDQQLS 589 (884)
T ss_pred HHHHHHHHcCCCCCCCc-----------------------------------------------eeEhHHhHhCCHHHHH
Confidence 99999999999864321 5677777765554444
Q ss_pred HHHHHHhhhcCceEEEeCCcccHHHHHHHHhccCCCEEEEEcCChhhHHHHHHCCccEEE--eCccccc
Q 002656 827 HHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI--SGVEGMQ 893 (896)
Q Consensus 827 ~~~~~l~~~~~~vv~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~~L~~AdVGI~i--sg~eg~q 893 (896)
+.+. +..||||++|+||..+|+.+|+ .|++|+|||||+||+|||++|||||++ +|+|..+
T Consensus 590 ~~~~------~~~Vfar~~P~~K~~iv~~lq~-~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~ 651 (884)
T TIGR01522 590 QIVP------KVAVFARASPEHKMKIVKALQK-RGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAK 651 (884)
T ss_pred HHhh------cCeEEEECCHHHHHHHHHHHHH-CCCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHH
Confidence 4332 4569999999999999999998 899999999999999999999999998 3566553
No 16
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=5.6e-85 Score=795.99 Aligned_cols=579 Identities=19% Similarity=0.229 Sum_probs=452.7
Q ss_pred cCCcCCCCCCCceeeccccchhhhhHHHHHHHhhhHHHHHHHHHHHHhcccCCCCCCcccccchhhhhhHHHHHHHHHHH
Q 002656 46 MHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDW 125 (896)
Q Consensus 46 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~~f~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~~~~~~~d~ 125 (896)
+...|+++||+|.++.++...++ +.|+++|+.|++++++++++++++. ..| ...+.++++++++.+...++++
T Consensus 38 ev~~r~~~~G~N~l~~~~~~~~~---~~~~~~~~~p~~~iL~~~a~ls~~~---~~~-~~~~iI~~iv~~~~~i~~~~e~ 110 (867)
T TIGR01524 38 EVTERLAEFGPNQTVEEKKVPNL---RLLIRAFNNPFIYILAMLMGVSYLT---DDL-EATVIIALMVLASGLLGFIQES 110 (867)
T ss_pred HHHHHHHhcCCCcCCCCCCCCHH---HHHHHHHhhHHHHHHHHHHHHHHHH---hhH-HHHHHhhhHHHHHHHHHHHHHH
Confidence 45668889999999998765433 7899999999999999999999873 333 3444455677788888888888
Q ss_pred HHhcchhhh---ccceEEEEeC------CCeEEEeecccCccCcEEEeccCCcCCceEEEEeecCCCceEEEEeccCCCC
Q 002656 126 RRFMQDKEV---NARKVSVHVG------NGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGE 196 (896)
Q Consensus 126 ~r~k~~~~~---n~~~~~V~~r------~g~~~~i~~~~L~vGDII~l~~ge~vPaD~~lL~ss~~~G~~~Vdes~LtGE 196 (896)
+..++...+ ...+++|+ | ||++++|++++|+|||||.|++||.||||++|+++++ +.||||+||||
T Consensus 111 ~a~ka~~~L~~l~~~~~~V~-R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~----l~VDES~LTGE 185 (867)
T TIGR01524 111 RAERAAYALKNMVKNTATVL-RVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARD----LFINQSALTGE 185 (867)
T ss_pred HHHHHHHHHhhhccCeeEEE-EecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEecCc----eEEEcccccCC
Confidence 887665444 45789999 7 8999999999999999999999999999999999543 79999999999
Q ss_pred CcceeecccccCCCCCchhhhccceEEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeeccceeecCCeEEEEEEEecc
Q 002656 197 TNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGH 276 (896)
Q Consensus 197 s~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~g~Vi~tG~ 276 (896)
|.|+.|.+++.... .. +..+.+...|+||.+.+|. +.++|++||.
T Consensus 186 S~PV~K~~~~~~~~---~~-----------~~~~~~n~vfaGT~v~~G~---------------------~~~~V~~tG~ 230 (867)
T TIGR01524 186 SLPVEKFVEDKRAR---DP-----------EILERENLCFMGTNVLSGH---------------------AQAVVLATGS 230 (867)
T ss_pred CCcccccCCccccc---cc-----------cccccccceecCCeEEEeE---------------------EEEEEEEEcC
Confidence 99999988653200 00 0001122346677666666 9999999999
Q ss_pred ccceeeccC---CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCCcccCCCCCchhHH
Q 002656 277 DSKVMQNAT---TSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGL 353 (896)
Q Consensus 277 ~Tk~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~ii~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (896)
+|.+++... . +..++++++.++++..++..+.++++++.++++.+... .| .
T Consensus 231 ~T~~gki~~~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~-----~~--------------------~ 284 (867)
T TIGR01524 231 STWFGSLAIAATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMKG-----DW--------------------L 284 (867)
T ss_pred ccHHHHHHHHhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhcC-----CH--------------------H
Confidence 997755433 4 45578999999999999988888888776655432111 12 2
Q ss_pred HHHHHHHHHhccccccchhhhHHHHHHHHHHHHhhccccccCCCCCCceeecccccccccceeEEEecCCCcccccceEE
Q 002656 354 AHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDF 433 (896)
Q Consensus 354 ~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~ 433 (896)
..|.+++.+++.+||++||++++++...++.++ +++++++|++..+|.||++++||||||||||+|+|++
T Consensus 285 ~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~m----------ak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v 354 (867)
T TIGR01524 285 EAFLFALAVAVGLTPEMLPMIVSSNLAKGAINM----------SKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIEL 354 (867)
T ss_pred HHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHH----------HhCCcEEccchhhhhccCccEEEecCCCccccCeEEE
Confidence 467888999999999999999999999998888 8999999999999999999999999999999999999
Q ss_pred EEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhcccccCCCCccccccccccCCCCccccccCCCccccccccccC
Q 002656 434 LKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGN 513 (896)
Q Consensus 434 ~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (896)
.+++... ..
T Consensus 355 ~~~~~~~----~~------------------------------------------------------------------- 363 (867)
T TIGR01524 355 EKHIDSS----GE------------------------------------------------------------------- 363 (867)
T ss_pred EEEecCC----CC-------------------------------------------------------------------
Confidence 8864100 00
Q ss_pred CCCCCChHHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCcee
Q 002656 514 WLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVER 593 (896)
Q Consensus 514 ~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~ 593 (896)
...+++...++|+... ...+||.|.|+++++....... ...
T Consensus 364 --------~~~~~l~~a~l~~~~~-----------~~~~~p~~~Al~~~~~~~~~~~--------------------~~~ 404 (867)
T TIGR01524 364 --------TSERVLKMAWLNSYFQ-----------TGWKNVLDHAVLAKLDESAARQ--------------------TAS 404 (867)
T ss_pred --------CHHHHHHHHHHhCCCC-----------CCCCChHHHHHHHHHHhhchhh--------------------Hhh
Confidence 0012333334333210 0146999999999987532110 124
Q ss_pred EEEEeeeecCCCCCeeEEEEEEcCCCcEEEEEcccchhhhHhhhcc---------ccccHHHHHHHHHHHHhcCCeEEEE
Q 002656 594 EFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKN---------GRMYEEATTKLLNEYGEAGLRTLAL 664 (896)
Q Consensus 594 ~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~~~~~~~~G~r~l~~ 664 (896)
.|+.++.+||+|.||||+++++++++..++|+||||+.|+++|+.. +++.++.+.+.+++++.+|+|++++
T Consensus 405 ~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlav 484 (867)
T TIGR01524 405 RWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAV 484 (867)
T ss_pred cCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 5677788999999999999998776678999999999999999741 1223556778889999999999999
Q ss_pred EEEeCCHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHhhhcccEEEEeeeeccccCCChHHHHHHHHHcCCeEEEEcCCc
Q 002656 665 AYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDK 744 (896)
Q Consensus 665 A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~aGIkv~mlTGD~ 744 (896)
|||+++.++.. + .+..|++|+|+|+++++||+|++++++|++|+++||+|+|+|||+
T Consensus 485 A~~~~~~~~~~-~----------------------~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~ 541 (867)
T TIGR01524 485 ATKTLKVGEAD-F----------------------TKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDN 541 (867)
T ss_pred EEeccCccccc-c----------------------cccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCC
Confidence 99998654210 0 012368999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcchh
Q 002656 745 METAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDD 824 (896)
Q Consensus 745 ~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~ 824 (896)
..||.+||+++||..++ +++|..+...-+++
T Consensus 542 ~~tA~aIA~~lGI~~~~-------------------------------------------------v~~g~~l~~~~~~e 572 (867)
T TIGR01524 542 EIVTARICQEVGIDAND-------------------------------------------------FLLGADIEELSDEE 572 (867)
T ss_pred HHHHHHHHHHcCCCCCC-------------------------------------------------eeecHhhhhCCHHH
Confidence 99999999999996321 56777776654444
Q ss_pred HHHHHHHHhhhcCceEEEeCCcccHHHHHHHHhccCCCEEEEEcCChhhHHHHHHCCccEEE-eCccc-cccCC
Q 002656 825 MKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI-SGVEG-MQVGT 896 (896)
Q Consensus 825 ~~~~~~~l~~~~~~vv~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~~L~~AdVGI~i-sg~eg-~qaa~ 896 (896)
+.+.. . +..||||++|+||.++|+.+|+ .|++|+|+|||+||+|||++|||||+| +|+|+ .+|||
T Consensus 573 l~~~~----~--~~~vfAr~~Pe~K~~iV~~lq~-~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~aAD 639 (867)
T TIGR01524 573 LAREL----R--KYHIFARLTPMQKSRIIGLLKK-AGHTVGFLGDGINDAPALRKADVGISVDTAADIAKEASD 639 (867)
T ss_pred HHHHh----h--hCeEEEECCHHHHHHHHHHHHh-CCCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHHhCC
Confidence 43332 2 2349999999999999999998 899999999999999999999999999 46775 44443
No 17
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=4e-85 Score=797.66 Aligned_cols=595 Identities=20% Similarity=0.239 Sum_probs=451.8
Q ss_pred cCCcCCCCCCCceeeccccchhhhhHHHHHHHhhhHHHHHHHHHHHHhccc--CCC------CCCcccccchhhhhhHHH
Q 002656 46 MHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP--LSP------FSPVSMLLPLAIVVGVSM 117 (896)
Q Consensus 46 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~~f~~~~n~~~l~~~il~~~~--~~~------~~~~~~~~~l~~vl~i~~ 117 (896)
+...|+.+||+|.++.++...++ +.|++||+.|+.+.++++++++++. +.+ .+|. ..+.++++++++.
T Consensus 50 ea~~rl~~~G~N~l~~~~~~~~~---~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~-~~~iI~~~v~l~~ 125 (903)
T PRK15122 50 DAAERLQRYGPNEVAHEKPPHAL---VQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGEETDLT-GVIIILTMVLLSG 125 (903)
T ss_pred HHHHHHHhcCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCccccHh-HHHHHHHHHHHHH
Confidence 34568899999999988766443 7899999999999999999999874 111 1233 3344556677888
Q ss_pred HHHHHHHHHHhcchhhhc---cceEEEEeCC------CeEEEeecccCccCcEEEeccCCcCCceEEEEeecCCCceEEE
Q 002656 118 AKEALEDWRRFMQDKEVN---ARKVSVHVGN------GVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYV 188 (896)
Q Consensus 118 ~~~~~~d~~r~k~~~~~n---~~~~~V~~r~------g~~~~i~~~~L~vGDII~l~~ge~vPaD~~lL~ss~~~G~~~V 188 (896)
+.+++++++..++.+.+. ..+++|+ || |++++|++++|+|||||.|++||.||||++|+++++ +.|
T Consensus 126 ~i~~~qe~~a~~a~~~L~~l~~~~~~V~-Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~----l~V 200 (903)
T PRK15122 126 LLRFWQEFRSNKAAEALKAMVRTTATVL-RRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRD----LFI 200 (903)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCceEEE-ECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCc----eEE
Confidence 889999998887665554 4789999 77 589999999999999999999999999999999553 799
Q ss_pred EeccCCCCCcceeecccccCCCCCchhhhccceEEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeeccceeecCCeEE
Q 002656 189 ETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVY 268 (896)
Q Consensus 189 des~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~ 268 (896)
|||+|||||.|+.|.+..........+. ..+. ..+..+.....|+||.+.+|. +.
T Consensus 201 DES~LTGES~PV~K~~~~~~~~~~~~~~---~~~~-~~~~~~~~n~vfaGT~V~~G~---------------------~~ 255 (903)
T PRK15122 201 SQAVLTGEALPVEKYDTLGAVAGKSADA---LADD-EGSLLDLPNICFMGTNVVSGT---------------------AT 255 (903)
T ss_pred EccccCCCCcceeeeccccccccccccc---cccc-cCCcccccceEEeCCEEEeee---------------------EE
Confidence 9999999999999986311000000000 0000 000001122346666666655 99
Q ss_pred EEEEEeccccceeeccCCC--CCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCCcccCCC
Q 002656 269 GSVIFTGHDSKVMQNATTS--PSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPG 346 (896)
Q Consensus 269 g~Vi~tG~~Tk~~~~~~~~--~~k~s~l~~~~~~~~~~~~~~~ii~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (896)
++|++||.+|.+++..+.. +..++++++.++++..++..+.++++.+.+++..+... .|
T Consensus 256 ~~V~atG~~T~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~~-----~~-------------- 316 (903)
T PRK15122 256 AVVVATGSRTYFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTKG-----DW-------------- 316 (903)
T ss_pred EEEEEeccccHhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccC-----CH--------------
Confidence 9999999999765544321 34568999999999888877766666555444322110 12
Q ss_pred CCchhHHHHHHHHHHHhccccccchhhhHHHHHHHHHHHHhhccccccCCCCCCceeecccccccccceeEEEecCCCcc
Q 002656 347 KPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTL 426 (896)
Q Consensus 347 ~~~~~~~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTL 426 (896)
...|.+++.+++.+||++||++++++...++.++ +++++++|++..+|.||++++|||||||||
T Consensus 317 ------~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~m----------ak~~ilVk~l~avE~Lg~v~vIc~DKTGTL 380 (903)
T PRK15122 317 ------LEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAM----------ARRKVVVKRLNAIQNFGAMDVLCTDKTGTL 380 (903)
T ss_pred ------HHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH----------HHcCCeecccchhhhhcCCcEEEecCCccc
Confidence 2467788999999999999999999999888888 889999999999999999999999999999
Q ss_pred cccceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhcccccCCCCccccccccccCCCCccccccCCCcccc
Q 002656 427 TCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFED 506 (896)
Q Consensus 427 T~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (896)
|+|+|.+.+++.... . .
T Consensus 381 T~~~m~V~~~~~~~~---~--~---------------------------------------------------------- 397 (903)
T PRK15122 381 TQDRIILEHHLDVSG---R--K---------------------------------------------------------- 397 (903)
T ss_pred ccCeEEEEEEEcCCC---C--C----------------------------------------------------------
Confidence 999999988652110 0 0
Q ss_pred ccccccCCCCCCChHHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCC
Q 002656 507 SRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPP 586 (896)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~ 586 (896)
. .+++...++|... . . ..+||.|.|+++++...|...
T Consensus 398 -------------~---~~~l~~a~l~s~~-~--~--------~~~~p~e~All~~a~~~~~~~---------------- 434 (903)
T PRK15122 398 -------------D---ERVLQLAWLNSFH-Q--S--------GMKNLMDQAVVAFAEGNPEIV---------------- 434 (903)
T ss_pred -------------h---HHHHHHHHHhCCC-C--C--------CCCChHHHHHHHHHHHcCchh----------------
Confidence 0 0223333333111 0 0 147999999999998766421
Q ss_pred CCCCceeEEEEeeeecCCCCCeeEEEEEEcCCCcEEEEEcccchhhhHhhhcc---------ccccHHHHHHHHHHHHhc
Q 002656 587 KGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKN---------GRMYEEATTKLLNEYGEA 657 (896)
Q Consensus 587 ~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~~~~~~~~ 657 (896)
....|+.++.+||++.||||++++++.+|++++++||||+.|+++|+.. +++.++.+.+.+++++.+
T Consensus 435 ----~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~ 510 (903)
T PRK15122 435 ----KPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNAD 510 (903)
T ss_pred ----hhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhC
Confidence 0235667788999999999999999878889999999999999999741 112355677788999999
Q ss_pred CCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHhhhcccEEEEeeeeccccCCChHHHHHHHHHcCCeE
Q 002656 658 GLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKI 737 (896)
Q Consensus 658 G~r~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~aGIkv 737 (896)
|+|++++|||+++.++..++ ..+..|+||+|+|+++++||+|++++++|+.|+++||+|
T Consensus 511 G~rvlavA~k~~~~~~~~~~---------------------~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v 569 (903)
T PRK15122 511 GFRVLLVATREIPGGESRAQ---------------------YSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAV 569 (903)
T ss_pred CCEEEEEEEeccCccccccc---------------------cccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeE
Confidence 99999999998865432110 012357899999999999999999999999999999999
Q ss_pred EEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCceEEEEeCchh
Q 002656 738 WVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTL 817 (896)
Q Consensus 738 ~mlTGD~~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l 817 (896)
+|+|||++.||.+||+++||... -+++|..|
T Consensus 570 ~miTGD~~~tA~aIA~~lGI~~~-------------------------------------------------~vi~G~el 600 (903)
T PRK15122 570 KVLTGDNPIVTAKICREVGLEPG-------------------------------------------------EPLLGTEI 600 (903)
T ss_pred EEECCCCHHHHHHHHHHcCCCCC-------------------------------------------------CccchHhh
Confidence 99999999999999999999531 16788888
Q ss_pred hhhcchhHHHHHHHHhhhcCceEEEeCCcccHHHHHHHHhccCCCEEEEEcCChhhHHHHHHCCccEEE-eCcccc-ccC
Q 002656 818 AYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI-SGVEGM-QVG 895 (896)
Q Consensus 818 ~~~l~~~~~~~~~~l~~~~~~vv~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~~L~~AdVGI~i-sg~eg~-qaa 895 (896)
..+-++++.+... . ..||||++|+||..+|+.+|+ .|++|+|+|||+||+|||++|||||+| +|+|+. .||
T Consensus 601 ~~~~~~el~~~v~----~--~~VfAr~sPe~K~~iV~~Lq~-~G~vVamtGDGvNDaPALk~ADVGIAmg~gtdvAkeaA 673 (903)
T PRK15122 601 EAMDDAALAREVE----E--RTVFAKLTPLQKSRVLKALQA-NGHTVGFLGDGINDAPALRDADVGISVDSGADIAKESA 673 (903)
T ss_pred hhCCHHHHHHHhh----h--CCEEEEeCHHHHHHHHHHHHh-CCCEEEEECCCchhHHHHHhCCEEEEeCcccHHHHHhc
Confidence 7765555444432 2 339999999999999999998 899999999999999999999999999 578864 444
Q ss_pred C
Q 002656 896 T 896 (896)
Q Consensus 896 ~ 896 (896)
|
T Consensus 674 D 674 (903)
T PRK15122 674 D 674 (903)
T ss_pred C
Confidence 3
No 18
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=4.1e-84 Score=779.00 Aligned_cols=553 Identities=20% Similarity=0.258 Sum_probs=447.4
Q ss_pred CCcCCCCCCCceeeccccchhhhhHHHHHHHhhhHHHHHHHHHHHHhcccCCCCCCcccccchhhhhhHHHHHHHHHHHH
Q 002656 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWR 126 (896)
Q Consensus 47 ~~~~~~~~g~N~i~~~k~~~~~flp~~l~~~f~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~~~~~~~d~~ 126 (896)
...|+.+||+|.++..+.+.| +.|+++|+.|+++.++++++++++. ..|...++ ++++++++.+.+++++++
T Consensus 7 a~~r~~~~G~N~~~~~~~~~~----~~~~~~~~~~~~~lL~~aa~~s~~~---~~~~~~~~-i~~~~~i~~~i~~~qe~~ 78 (755)
T TIGR01647 7 AKKRLAKYGPNELPEKKVSPL----LKFLGFFWNPLSWVMEAAAIIAIAL---ENWVDFVI-ILGLLLLNATIGFIEENK 78 (755)
T ss_pred HHHHHHhcCCCCCCCCCCCHH----HHHHHHHhchHHHHHHHHHHHHHhh---cchhhhhh-hhhhhHHHHHHHHHHHHH
Confidence 355788999999998666554 7789999999999999999999874 34444444 556677888889999998
Q ss_pred Hhcchhhh---ccceEEEEeCCCeEEEeecccCccCcEEEeccCCcCCceEEEEeecCCCceEEEEeccCCCCCcceeec
Q 002656 127 RFMQDKEV---NARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKR 203 (896)
Q Consensus 127 r~k~~~~~---n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~~lL~ss~~~G~~~Vdes~LtGEs~~~~K~ 203 (896)
..++.+.+ ...+++|+ |||++++|+.++|+|||||.|++||.||||++|+++++ +.||||+|||||.|+.|.
T Consensus 79 a~~~~~~L~~~~~~~~~V~-Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~----~~VDeS~LTGES~PV~K~ 153 (755)
T TIGR01647 79 AGNAVEALKQSLAPKARVL-RDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDY----IQVDQAALTGESLPVTKK 153 (755)
T ss_pred HHHHHHHHHhhCCCeEEEE-ECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCc----eEEEcccccCCccceEec
Confidence 88876555 45789999 89999999999999999999999999999999999432 899999999999999998
Q ss_pred ccccCCCCCchhhhccceEEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeeccceeecCCeEEEEEEEeccccceee-
Q 002656 204 AMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQ- 282 (896)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~g~Vi~tG~~Tk~~~- 282 (896)
+++.. |+||.+.+|. +.++|++||.+|.+++
T Consensus 154 ~~~~v---------------------------~aGT~v~~G~---------------------~~~~V~~tG~~T~~g~i 185 (755)
T TIGR01647 154 TGDIA---------------------------YSGSTVKQGE---------------------AEAVVTATGMNTFFGKA 185 (755)
T ss_pred cCCee---------------------------eccCEEEccE---------------------EEEEEEEcCCccHHHHH
Confidence 76544 9999999998 9999999999997654
Q ss_pred --ccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCCcccCCCCCchhHHHHHHHHH
Q 002656 283 --NATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTAL 360 (896)
Q Consensus 283 --~~~~~~~k~s~l~~~~~~~~~~~~~~~ii~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 360 (896)
.....+..++++++.++++..+++++.++++++.++++.+.... .| ...+.+++
T Consensus 186 ~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~----~~--------------------~~~~~~~i 241 (755)
T TIGR01647 186 AALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGE----SF--------------------REGLQFAL 241 (755)
T ss_pred HHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC----CH--------------------HHHHHHHH
Confidence 34455666789999999999999888888887777665431110 12 24678889
Q ss_pred HHhccccccchhhhHHHHHHHHHHHHhhccccccCCCCCCceeecccccccccceeEEEecCCCcccccceEEEEEEEcC
Q 002656 361 ILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAG 440 (896)
Q Consensus 361 ~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~ 440 (896)
.+++.+|||+||++++++...++.++ +++++++|+++.+|.||.+|+||||||||||+|+|.+.+++..+
T Consensus 242 ~vlv~a~P~~Lp~~~~~~la~g~~r~----------ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~ 311 (755)
T TIGR01647 242 VLLVGGIPIAMPAVLSVTMAVGAAEL----------AKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFF 311 (755)
T ss_pred HHHHHhCCcchHHHHHHHHHHHHHHH----------HhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecC
Confidence 99999999999999999999999888 89999999999999999999999999999999999999987432
Q ss_pred eeccCCchHHHHHHHHhhhhchhhhhhhhhcccccCCCCccccccccccCCCCccccccCCCccccccccccCCCCCCCh
Q 002656 441 TAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNV 520 (896)
Q Consensus 441 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (896)
..+ +
T Consensus 312 ~~~----~------------------------------------------------------------------------ 315 (755)
T TIGR01647 312 NGF----D------------------------------------------------------------------------ 315 (755)
T ss_pred CCC----C------------------------------------------------------------------------
Confidence 100 0
Q ss_pred HHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEeee
Q 002656 521 DTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNL 600 (896)
Q Consensus 521 ~~~~~~~~~la~C~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~ 600 (896)
..+++...++|+.. .++||.|.|+++++++.+. ....|++++.
T Consensus 316 --~~~~l~~a~~~~~~-------------~~~~pi~~Ai~~~~~~~~~----------------------~~~~~~~~~~ 358 (755)
T TIGR01647 316 --KDDVLLYAALASRE-------------EDQDAIDTAVLGSAKDLKE----------------------ARDGYKVLEF 358 (755)
T ss_pred --HHHHHHHHHHhCCC-------------CCCChHHHHHHHHHHHhHH----------------------HHhcCceEEE
Confidence 01244455555420 1469999999998876431 0245677889
Q ss_pred ecCCCCCeeEEEEEEcCC-CcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHH
Q 002656 601 LDFTSKRKRMSVIVRDED-GQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNS 679 (896)
Q Consensus 601 ~~F~s~rkrmsviv~~~~-~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~k~l~~~e~~~~~~ 679 (896)
+||++.+|+|++++++++ |+.++++||+|+.|+++|+.. .+.++.+.+.+++++.+|+|++++|+|+.
T Consensus 359 ~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~-~~~~~~~~~~~~~~~~~G~rvl~vA~~~~---------- 427 (755)
T TIGR01647 359 VPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK-KEIEEKVEEKVDELASRGYRALGVARTDE---------- 427 (755)
T ss_pred eccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc-HHHHHHHHHHHHHHHhCCCEEEEEEEEcC----------
Confidence 999999999999998764 778899999999999999753 23566778888999999999999999721
Q ss_pred HHHHHHhhhccCHHHHHHHHHHhhhcccEEEEeeeeccccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002656 680 EFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (896)
Q Consensus 680 ~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~ 759 (896)
|.+|+|+|+++++||+|++++++|+.|+++||+|+|+|||++.||.+||+++||..
T Consensus 428 ------------------------e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~ 483 (755)
T TIGR01647 428 ------------------------EGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGT 483 (755)
T ss_pred ------------------------CCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC
Confidence 36899999999999999999999999999999999999999999999999999964
Q ss_pred cCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcchhHHHHHHHHhhhcCce
Q 002656 760 QGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASV 839 (896)
Q Consensus 760 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~v 839 (896)
.. +.+.. +.+|+.++..-++++.+.+ ..+ .
T Consensus 484 ~~-----~~~~~---------------------------------------l~~~~~~~~~~~~~~~~~~----~~~--~ 513 (755)
T TIGR01647 484 NI-----YTADV---------------------------------------LLKGDNRDDLPSGELGEMV----EDA--D 513 (755)
T ss_pred CC-----cCHHH---------------------------------------hcCCcchhhCCHHHHHHHH----HhC--C
Confidence 21 00000 1223333222222333322 222 3
Q ss_pred EEEeCCcccHHHHHHHHhccCCCEEEEEcCChhhHHHHHHCCccEEE-eCccccc
Q 002656 840 ICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI-SGVEGMQ 893 (896)
Q Consensus 840 v~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~~L~~AdVGI~i-sg~eg~q 893 (896)
||||++|+||..+|+.+|+ .|++|+|+|||+||+|||++|||||+| +|+|..+
T Consensus 514 vfAr~~Pe~K~~iV~~lq~-~G~~VamvGDGvNDapAL~~AdVGIAm~~gtdvAk 567 (755)
T TIGR01647 514 GFAEVFPEHKYEIVEILQK-RGHLVGMTGDGVNDAPALKKADVGIAVAGATDAAR 567 (755)
T ss_pred EEEecCHHHHHHHHHHHHh-cCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHH
Confidence 9999999999999999998 899999999999999999999999999 5677543
No 19
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=2.5e-73 Score=662.57 Aligned_cols=493 Identities=20% Similarity=0.207 Sum_probs=390.3
Q ss_pred HHHhhhHHHHHHHHHHHHhccc-CCC------CCCcccc---cchhhhhhHHHHHHHHHHHHHhcchhhhcc----ceEE
Q 002656 75 FEQFNRVANIYFLIAALLSVTP-LSP------FSPVSML---LPLAIVVGVSMAKEALEDWRRFMQDKEVNA----RKVS 140 (896)
Q Consensus 75 ~~~f~~~~n~~~l~~~il~~~~-~~~------~~~~~~~---~~l~~vl~i~~~~~~~~d~~r~k~~~~~n~----~~~~ 140 (896)
..||++|..+.++++++++++. +.+ ..+...+ +.+++.+++..+.+.+.++|.+++.+.+.+ .+++
T Consensus 28 ~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~ 107 (679)
T PRK01122 28 RVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFAR 107 (679)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 4678899999999999999864 111 1122222 223333444555566777776666555543 3699
Q ss_pred EEeCCCe-EEEeecccCccCcEEEeccCCcCCceEEEEeecCCCceEEEEeccCCCCCcceeecccccCCCCCchhhhcc
Q 002656 141 VHVGNGV-FSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKE 219 (896)
Q Consensus 141 V~~r~g~-~~~i~~~~L~vGDII~l~~ge~vPaD~~lL~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~ 219 (896)
|+ |+|+ +++|+.++|++||+|.|++||.||||++|++ |.+.||||+|||||.|+.|.+++..
T Consensus 108 vi-r~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vie-----G~a~VDESaLTGES~PV~K~~G~~~----------- 170 (679)
T PRK01122 108 KL-REPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIE-----GVASVDESAITGESAPVIRESGGDF----------- 170 (679)
T ss_pred EE-ECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEE-----ccEEEEcccccCCCCceEeCCCCcc-----------
Confidence 99 7777 9999999999999999999999999999999 6689999999999999999987441
Q ss_pred ceEEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeeccceeecCCeEEEEEEEeccccceee---ccCCCCCCcCHHHH
Q 002656 220 FTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQ---NATTSPSKRSGIEK 296 (896)
Q Consensus 220 ~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~g~Vi~tG~~Tk~~~---~~~~~~~k~s~l~~ 296 (896)
...|+||.+++|. +.+.|+.+|.+|.+.+ ..+..+.+++|+|+
T Consensus 171 -------------~~V~aGT~v~~G~---------------------~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~ 216 (679)
T PRK01122 171 -------------SSVTGGTRVLSDW---------------------IVIRITANPGESFLDRMIALVEGAKRQKTPNEI 216 (679)
T ss_pred -------------CeEEeceEEEeee---------------------EEEEEEEecccCHHHHHHHHHHhccccCCHHHH
Confidence 1248999999888 9999999999996644 45566677899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCCcccCCCCCchhHHHHHHHHHHHhccccccchhhhHH
Q 002656 297 KMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIE 376 (896)
Q Consensus 297 ~~~~~~~~~~~~~ii~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~l~ 376 (896)
.++.+..+++.+.++++++.+.+. ||... -..+...+.+++.+|||+|+..++
T Consensus 217 al~~l~~~l~~i~l~~~~~~~~~~-----------~~~g~----------------~~~l~~~iallV~aiP~alg~l~~ 269 (679)
T PRK01122 217 ALTILLAGLTIIFLLVVATLPPFA-----------AYSGG----------------ALSITVLVALLVCLIPTTIGGLLS 269 (679)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHH-----------HHhCc----------------hHHHHHHHHHHHHcccchhhhHHH
Confidence 888876666544443333222211 11100 125677888999999999999888
Q ss_pred HHHHHHHHHHhhccccccCCCCCCceeecccccccccceeEEEecCCCcccccceEEEEEEEcCeeccCCchHHHHHHHH
Q 002656 377 IVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAK 456 (896)
Q Consensus 377 ~~~~~~~~~i~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~ 456 (896)
++...++.++ .++++++|+...+|.||++|+||||||||||+|+|.+..++..+. .
T Consensus 270 ~i~i~g~~r~----------ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~-----~--------- 325 (679)
T PRK01122 270 AIGIAGMDRV----------LQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPG-----V--------- 325 (679)
T ss_pred HHHHHHHHHH----------hcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCC-----C---------
Confidence 8888888888 899999999999999999999999999999999999988752110 0
Q ss_pred hhhhchhhhhhhhhcccccCCCCccccccccccCCCCccccccCCCccccccccccCCCCCCChHHHHHHHHHHhhccee
Q 002656 457 QMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTA 536 (896)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~C~~~ 536 (896)
..++++.+.++|+..
T Consensus 326 -----------------------------------------------------------------~~~~ll~~a~~~s~~ 340 (679)
T PRK01122 326 -----------------------------------------------------------------TEEELADAAQLSSLA 340 (679)
T ss_pred -----------------------------------------------------------------CHHHHHHHHHHhcCC
Confidence 011355566666443
Q ss_pred eecccCCCCceEEecCChhHHHHHHHHHH-CCcEEEEEcCCeEEEEecCCCCCCCceeEEEEeeeecCCCCCeeEEEEEE
Q 002656 537 IPELNEETGNLTYEAESPDEAAFLVAARE-FGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVR 615 (896)
Q Consensus 537 ~~~~~~~~~~~~~~~~sp~e~Al~~~a~~-~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~ 615 (896)
+.||...|++++++. +++... ...+...+.+||++.+++|++.+.
T Consensus 341 --------------s~hP~~~AIv~~a~~~~~~~~~--------------------~~~~~~~~~~pF~s~~~~~gv~~~ 386 (679)
T PRK01122 341 --------------DETPEGRSIVVLAKQRFNLRER--------------------DLQSLHATFVPFSAQTRMSGVDLD 386 (679)
T ss_pred --------------CCCchHHHHHHHHHhhcCCCch--------------------hhccccceeEeecCcCceEEEEEC
Confidence 358999999999986 343210 112455678899999988887653
Q ss_pred cCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhccCHHHH
Q 002656 616 DEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREAT 695 (896)
Q Consensus 616 ~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~ 695 (896)
| ..|+||+++.|++.|...+...++.+.+.+++++.+|+|++++|+
T Consensus 387 ---g--~~~~kGa~e~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~va~----------------------------- 432 (679)
T PRK01122 387 ---G--REIRKGAVDAIRRYVESNGGHFPAELDAAVDEVARKGGTPLVVAE----------------------------- 432 (679)
T ss_pred ---C--EEEEECCHHHHHHHHHhcCCcChHHHHHHHHHHHhCCCcEEEEEE-----------------------------
Confidence 3 589999999999999766555667788888999999999999994
Q ss_pred HHHHHHhhhcccEEEEeeeeccccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhh
Q 002656 696 LEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSV 775 (896)
Q Consensus 696 l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~ 775 (896)
|++++|+++++|++|+|++++|++||++||+++|+|||++.||.+||+++||.+
T Consensus 433 ----------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~---------------- 486 (679)
T PRK01122 433 ----------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD---------------- 486 (679)
T ss_pred ----------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE----------------
Confidence 678999999999999999999999999999999999999999999999999842
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcchhHHHHHHHHhhhcCceEEEeCCcccHHHHHHH
Q 002656 776 GKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRL 855 (896)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vv~~r~sP~qK~~iV~~ 855 (896)
++||++|+||..+|+.
T Consensus 487 ----------------------------------------------------------------v~A~~~PedK~~iV~~ 502 (679)
T PRK01122 487 ----------------------------------------------------------------FLAEATPEDKLALIRQ 502 (679)
T ss_pred ----------------------------------------------------------------EEccCCHHHHHHHHHH
Confidence 8999999999999999
Q ss_pred HhccCCCEEEEEcCChhhHHHHHHCCccEEE-eCccccc
Q 002656 856 VKEGTGKTTLAIGDGANDVGMIQEADIGIGI-SGVEGMQ 893 (896)
Q Consensus 856 lk~~~g~~vl~iGDG~ND~~~L~~AdVGI~i-sg~eg~q 893 (896)
+|+ .|++|+|+|||+||+|||++|||||+| +|+|..+
T Consensus 503 lQ~-~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAk 540 (679)
T PRK01122 503 EQA-EGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAK 540 (679)
T ss_pred HHH-cCCeEEEECCCcchHHHHHhCCEeEEeCCCCHHHH
Confidence 998 899999999999999999999999999 6777543
No 20
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-75 Score=646.67 Aligned_cols=640 Identities=21% Similarity=0.284 Sum_probs=454.4
Q ss_pred CCCCCceeeccccchhhhhHHHHHHHhhhHHHHHHHHHHHHhcccCCCCCCcccccchhhhhhHHHHHHHHHHHHHhcch
Q 002656 52 LKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQD 131 (896)
Q Consensus 52 ~~~g~N~i~~~k~~~~~flp~~l~~~f~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~~~~~~~d~~r~k~~ 131 (896)
.+||.|......+++- ..|.|.-.-|+.+|..+...+|+.. ..||++++.|++++ ..|+---++|.+..
T Consensus 174 ~~~G~N~fdi~vPtF~----eLFkE~A~aPfFVFQVFcvgLWCLD---eyWYySlFtLfMli----~fE~tlV~Qrm~~l 242 (1160)
T KOG0209|consen 174 HKYGKNKFDIVVPTFS----ELFKEHAVAPFFVFQVFCVGLWCLD---EYWYYSLFTLFMLI----AFEATLVKQRMRTL 242 (1160)
T ss_pred HHhcCCccccCCccHH----HHHHHhccCceeeHhHHhHHHHHhH---HHHHHHHHHHHHHH----HHHHHHHHHHHHHH
Confidence 3599999999999875 6777888899999999999999874 45666665554443 33444445555544
Q ss_pred hhh---c--cceEEEEeCCCeEEEeecccCccCcEEEecc---CCcCCceEEEEeecCCCceEEEEeccCCCCCcceeec
Q 002656 132 KEV---N--ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEK---DQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKR 203 (896)
Q Consensus 132 ~~~---n--~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~---ge~vPaD~~lL~ss~~~G~~~Vdes~LtGEs~~~~K~ 203 (896)
.++ . +..+.|+ |+++|+.+..++|.|||+|.|.. ...||||++||. |.|.|||++|||||.|..|.
T Consensus 243 se~R~Mg~kpy~I~v~-R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~-----GsciVnEaMLtGESvPl~KE 316 (1160)
T KOG0209|consen 243 SEFRTMGNKPYTINVY-RNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLR-----GSCIVNEAMLTGESVPLMKE 316 (1160)
T ss_pred HHHHhcCCCceEEEEE-ecCcceeccccccCCCceEEeccCcccCcCCceEEEEe-----cceeechhhhcCCCcccccc
Confidence 333 2 3568899 89999999999999999999987 678999999999 88999999999999999999
Q ss_pred ccccCCCCCchhhhccceEEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeeccceee-cCCeEEEEEEEeccccceee
Q 002656 204 AMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLR-NTAHVYGSVIFTGHDSKVMQ 282 (896)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~-nt~~~~g~Vi~tG~~Tk~~~ 282 (896)
++.... .+ ..+..+........|.||.++.-..- .-+.++ -.+-+++.|++||.+|..+.
T Consensus 317 ~Ie~~~----~d------~~ld~~~d~k~hVlfGGTkivQht~p---------~~~slk~pDggc~a~VlrTGFeTSQGk 377 (1160)
T KOG0209|consen 317 SIELRD----SD------DILDIDRDDKLHVLFGGTKIVQHTPP---------KKASLKTPDGGCVAYVLRTGFETSQGK 377 (1160)
T ss_pred ccccCC----hh------hhcccccccceEEEEcCceEEEecCC---------ccccccCCCCCeEEEEEeccccccCCc
Confidence 886642 11 12233344455677888888732100 001111 12448999999999996655
Q ss_pred ccCC---CCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecc--cCCCccccCCCCCCcccCCCCCchhHHHHHH
Q 002656 283 NATT---SPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINY--QTPQWWYLKPKETDVYFNPGKPLVPGLAHLV 357 (896)
Q Consensus 283 ~~~~---~~~k~s~l~~~~~~~~~~~~~~~ii~~~i~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (896)
..+. ...+-|.- |+-..+++++++++|++.+ +++|... +..+.-| ..|+
T Consensus 378 LvRtilf~aervTaN----n~Etf~FILFLlVFAiaAa--~Yvwv~Gskd~~RsrY--------------------KL~L 431 (1160)
T KOG0209|consen 378 LVRTILFSAERVTAN----NRETFIFILFLLVFAIAAA--GYVWVEGSKDPTRSRY--------------------KLFL 431 (1160)
T ss_pred eeeeEEecceeeeec----cHHHHHHHHHHHHHHHHhh--heEEEecccCcchhhh--------------------heee
Confidence 4442 11121211 3344455555666665553 3334321 1111222 3566
Q ss_pred HHHHHhccccccchhhhHHHHHHHHHHHHhhccccccCCCCCCceeecccccccccceeEEEecCCCcccccceEEEEEE
Q 002656 358 TALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCS 437 (896)
Q Consensus 358 ~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~ 437 (896)
-+..++...+|+-||+.++++.-.+...+ ++.++.|..+-.+.-.|+||.+|||||||||+..|.|.++.
T Consensus 432 eC~LIlTSVvPpELPmELSmAVNsSL~AL----------ak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gva 501 (1160)
T KOG0209|consen 432 ECTLILTSVVPPELPMELSMAVNSSLIAL----------AKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVA 501 (1160)
T ss_pred eeeEEEeccCCCCCchhhhHHHHHHHHHH----------HHhceeecCccccccCCceeEEEecCCCccccccEEEEecc
Confidence 78889999999999998888766665656 88999999999999999999999999999999999999874
Q ss_pred EcCeeccCCchHHHHHHHHhhhhchhhhhhhhhcccccCCCCccccccccccCCCCccccccCCCccccccccccCCCCC
Q 002656 438 VAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKE 517 (896)
Q Consensus 438 i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (896)
|..-... . . .
T Consensus 502 --g~~~~~~--~-------------------------------~-----------------------------------~ 511 (1160)
T KOG0209|consen 502 --GLSADEG--A-------------------------------L-----------------------------------T 511 (1160)
T ss_pred --cccCCcc--c-------------------------------c-----------------------------------c
Confidence 2110000 0 0 0
Q ss_pred CChHHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEE
Q 002656 518 PNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKI 597 (896)
Q Consensus 518 ~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i 597 (896)
+-.+.-.+-..++|.||+.....++ ..++|.|.|.+++ .||.+...+. ..+..|+ ....+|
T Consensus 512 ~~s~~p~~t~~vlAscHsLv~le~~-------lVGDPlEKA~l~~---v~W~~~k~~~-------v~p~~~~--~~~lkI 572 (1160)
T KOG0209|consen 512 PASKAPNETVLVLASCHSLVLLEDK-------LVGDPLEKATLEA---VGWNLEKKNS-------VCPREGN--GKKLKI 572 (1160)
T ss_pred chhhCCchHHHHHHHHHHHHHhcCc-------ccCChHHHHHHHh---cCcccccCcc-------cCCCcCC--Ccccch
Confidence 0001112456789999999775443 3689999999976 6676544221 1111222 246888
Q ss_pred eeeecCCCCCeeEEEEEEcCC----CcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHH
Q 002656 598 LNLLDFTSKRKRMSVIVRDED----GQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESE 673 (896)
Q Consensus 598 l~~~~F~s~rkrmsviv~~~~----~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~k~l~~~e 673 (896)
.+.+.|+|..|||||++.... -++++.+|||||+|.+++.. .+..+.+...+|+.+|.|||+++||.+..--
T Consensus 573 ~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~d----vP~dY~~iYk~ytR~GsRVLALg~K~l~~~~ 648 (1160)
T KOG0209|consen 573 IQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRD----VPKDYDEIYKRYTRQGSRVLALGYKPLGDMM 648 (1160)
T ss_pred hhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHh----CchhHHHHHHHHhhccceEEEEecccccccc
Confidence 999999999999999997632 36899999999999999875 4566777788999999999999999987321
Q ss_pred HHHHHHHHHHHHhhhccCHHHHHHHHHHhhhcccEEEEeeeeccccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHH
Q 002656 674 YSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGF 753 (896)
Q Consensus 674 ~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~ 753 (896)
.+ +.| +...+.+|.||+|.|++.|..|||+|++++|+.|++++++++|+||||+.||.++|+
T Consensus 649 ~~--------------q~r----d~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak 710 (1160)
T KOG0209|consen 649 VS--------------QVR----DLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAK 710 (1160)
T ss_pred hh--------------hhh----hhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehh
Confidence 11 011 123478899999999999999999999999999999999999999999999999999
Q ss_pred hccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcchhHHHHHHHHh
Q 002656 754 ACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLA 833 (896)
Q Consensus 754 ~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~ 833 (896)
++||......++.+.+...+ .+-.|....+.+...+...... ......+.++|+|.+|+++...+ .+.++.
T Consensus 711 ~v~iv~k~~~vl~~~~~~~~--~~~~w~s~d~t~~lp~~p~~~~----~~l~~~~dlcitG~~l~~l~~~~---~l~~l~ 781 (1160)
T KOG0209|consen 711 EVGIVEKPTLVLDLPEEGDG--NQLEWVSVDGTIVLPLKPGKKK----TLLAETHDLCITGSALDHLQATD---QLRRLI 781 (1160)
T ss_pred eeeeeccCceeeccCccCCC--ceeeEecCCCceeecCCCCccc----hhhhhhhhhhcchhHHHHHhhhH---HHHHhh
Confidence 99999875544444333211 0000100000000000000000 00234567899999999988766 222222
Q ss_pred hhcCceEEEeCCcccHHHHHHHHhccCCCEEEEEcCChhhHHHHHHCCccEEE
Q 002656 834 VECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI 886 (896)
Q Consensus 834 ~~~~~vv~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~~L~~AdVGI~i 886 (896)
.+ +-||||++|.||..++..+|+ .|+.|+|||||+||++||++||||||+
T Consensus 782 ~h--v~VfARvaP~QKE~ii~tlK~-~Gy~TLMCGDGTNDVGALK~AhVGVAL 831 (1160)
T KOG0209|consen 782 PH--VWVFARVAPKQKEFIITTLKK-LGYVTLMCGDGTNDVGALKQAHVGVAL 831 (1160)
T ss_pred hh--eeEEEeeChhhHHHHHHHHHh-cCeEEEEecCCCcchhhhhhcccceeh
Confidence 22 339999999999999999998 999999999999999999999999997
No 21
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.9e-75 Score=648.16 Aligned_cols=647 Identities=22% Similarity=0.265 Sum_probs=496.9
Q ss_pred CcCCCCCCCceeeccccchhhhhHHHHHHHhhhHHHHHHHHHHHHhccc--C--C-----CCCCcccccchhhhhhHHHH
Q 002656 48 KKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP--L--S-----PFSPVSMLLPLAIVVGVSMA 118 (896)
Q Consensus 48 ~~~~~~~g~N~i~~~k~~~~~flp~~l~~~f~~~~n~~~l~~~il~~~~--~--~-----~~~~~~~~~~l~~vl~i~~~ 118 (896)
.+++.+-|+|.++.+|.+.-+ ..|.+|++..+.+.++++++++++. + + +.+..+..+.|..+++++.+
T Consensus 65 ~~~L~rdG~NaL~Ppk~t~~w---ikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~ 141 (1019)
T KOG0203|consen 65 AEKLARDGPNALTPPKTTPEW---IKFLRQLFGGFSILLWIGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGL 141 (1019)
T ss_pred HhhhccCCCCCCCCCCCChHH---HHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEec
Confidence 346778999999999987632 4588999999999999999999864 1 1 12223334455566666766
Q ss_pred HHHHHHHHHhcc---hhhhccceEEEEeCCCeEEEeecccCccCcEEEeccCCcCCceEEEEeecCCCceEEEEeccCCC
Q 002656 119 KEALEDWRRFMQ---DKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDG 195 (896)
Q Consensus 119 ~~~~~d~~r~k~---~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~~lL~ss~~~G~~~Vdes~LtG 195 (896)
..++++.+-.+- .+.+-.+.++|+ |||....+..++|+|||+|.++-|++||||++++++.+ |+||+|+|||
T Consensus 142 ~~~~qe~ks~~im~sF~~l~P~~~~Vi-Rdg~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~~g----~~vdnsslTG 216 (1019)
T KOG0203|consen 142 FSYYQEAKSSKIMDSFKNLVPQQALVI-RDGEKMTINAEELVVGDLVEVKGGDRVPADIRIISATG----CKVDNSSLTG 216 (1019)
T ss_pred CCCccchhhHHHHHHHhccchhhheee-ecceeEEechhhcccccceeeccCCcccceeEEEEecc----eeEecccccc
Confidence 666666555443 344456889999 89999999999999999999999999999999999886 9999999999
Q ss_pred CCcceeecccccCCCCCchhhhccceEEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeeccceeecCCeEEEEEEEec
Q 002656 196 ETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTG 275 (896)
Q Consensus 196 Es~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~g~Vi~tG 275 (896)
||.|..+.+........ ......|.+|..++|. ++|+|++||
T Consensus 217 esEP~~~~~~~t~~~~~-----------------Et~Ni~f~st~~veG~---------------------~~givi~tG 258 (1019)
T KOG0203|consen 217 ESEPQTRSPEFTHENPL-----------------ETRNIAFFSTNCVEGT---------------------GRGIVIATG 258 (1019)
T ss_pred ccCCccCCccccccCch-----------------hheeeeeeeeEEecce---------------------EEEEEEecC
Confidence 99999987753321100 1122458888888888 999999999
Q ss_pred cccceeeccC---CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCCcccCCCCCchhH
Q 002656 276 HDSKVMQNAT---TSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPG 352 (896)
Q Consensus 276 ~~Tk~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~ii~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (896)
.+|.+++... .....++++++.+++++.++..+.+++.+..+++..+..+ .|
T Consensus 259 d~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~gy-----~~-------------------- 313 (1019)
T KOG0203|consen 259 DRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALILGY-----EW-------------------- 313 (1019)
T ss_pred CceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhhcc-----hh--------------------
Confidence 9999887655 4456789999999999999998888888877766655422 22
Q ss_pred HHHHHHHHHHhccccccchhhhHHHHHHHHHHHHhhccccccCCCCCCceeecccccccccceeEEEecCCCcccccceE
Q 002656 353 LAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMD 432 (896)
Q Consensus 353 ~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~ 432 (896)
+..+.+.+.+++..+|.+|+++++....+-+.+| +++++++|++.+.|.||...+||+|||||||+|.|.
T Consensus 314 l~avv~~i~iivAnvPeGL~~tvTv~LtltakrM----------a~Knc~vknLeavetlGsts~I~SDktGTlTqnrMt 383 (1019)
T KOG0203|consen 314 LRAVVFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMT 383 (1019)
T ss_pred HHHhhhhheeEEecCcCCccceehhhHHHHHHHH----------hhceeEEeeeeheeecccceeEeecceeeEEecceE
Confidence 3456668889999999999999999999989988 899999999999999999999999999999999999
Q ss_pred EEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhcccccCCCCccccccccccCCCCccccccCCCcccccccccc
Q 002656 433 FLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDG 512 (896)
Q Consensus 433 ~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (896)
|.++|.++.....+.++.. ++..|
T Consensus 384 Vahlw~d~~i~~~d~~~~~------------------------------------------------~~~~~-------- 407 (1019)
T KOG0203|consen 384 VAHLWFDNQIHEADTTEDQ------------------------------------------------SGQSF-------- 407 (1019)
T ss_pred EEeeccCCceeeeechhhh------------------------------------------------hcccc--------
Confidence 9999987765322211100 00000
Q ss_pred CCCCCCChHHHHHHHHHHhhcceeeecccCCCCc--eEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCC
Q 002656 513 NWLKEPNVDTLLLFFRILAICHTAIPELNEETGN--LTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQP 590 (896)
Q Consensus 513 ~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~--~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~ 590 (896)
...+.....+.++..+||.+.....+..-. -.-..+++.|.||++++...-... ..
T Consensus 408 ----~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~------------------~~ 465 (1019)
T KOG0203|consen 408 ----DKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSV------------------ME 465 (1019)
T ss_pred ----cccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchH------------------HH
Confidence 111345668899999999998764332111 123358999999999987532211 11
Q ss_pred ceeEEEEeeeecCCCCCeeEEEEEEcCC---CcEEEEEcccchhhhHhhhc---------cccccHHHHHHHHHHHHhcC
Q 002656 591 VEREFKILNLLDFTSKRKRMSVIVRDED---GQILLLCKGADSIIFDRLSK---------NGRMYEEATTKLLNEYGEAG 658 (896)
Q Consensus 591 ~~~~~~il~~~~F~s~rkrmsviv~~~~---~~~~l~~KGa~~~i~~~~~~---------~~~~~~~~~~~~~~~~~~~G 658 (896)
.++.++.+...||+|.+|+.-.+.+..+ .+..+.+|||||.++++|+. .++...+.+.....++...|
T Consensus 466 ~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~G 545 (1019)
T KOG0203|consen 466 LRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLG 545 (1019)
T ss_pred HHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcc
Confidence 2567888899999999999999988754 57899999999999999975 13346778888899999999
Q ss_pred CeEEEEEEEeCCHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHhhhcccEEEEeeeeccccCCChHHHHHHHHHcCCeEE
Q 002656 659 LRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIW 738 (896)
Q Consensus 659 ~r~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~aGIkv~ 738 (896)
-||+.+|++.++++++...-+ |.- ..+ +.--.+|.|+|++++-||+|..+|+++..||.|||||.
T Consensus 546 erVlgF~~~~l~~~~~p~~~~-f~~--d~~------------n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvi 610 (1019)
T KOG0203|consen 546 ERVLGFCDLELPDEKFPRGFQ-FDT--DDV------------NFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVI 610 (1019)
T ss_pred hHHHHHHHHhcchhcCCCceE-eec--CCC------------CCcchhccccchhhccCCCcccCchhhhhhhhhCceEE
Confidence 999999999998876543211 000 000 11125899999999999999999999999999999999
Q ss_pred EEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCceEEEEeCchhh
Q 002656 739 VLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLA 818 (896)
Q Consensus 739 mlTGD~~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~ 818 (896)
|+|||++.||.+||++.||+....+.+. ++.....-..+. ..+....+.|+.|.+|.
T Consensus 611 mVTgdhpiTAkAiA~~vgIi~~~~et~e-------------------~~a~r~~~~v~~----vn~~~a~a~VihG~eL~ 667 (1019)
T KOG0203|consen 611 MVTGDHPITAKAIAKSVGIISEGSETVE-------------------DIAKRLNIPVEQ----VNSRDAKAAVIHGSELP 667 (1019)
T ss_pred EEecCccchhhhhhhheeeecCCchhhh-------------------hhHHhcCCcccc----cCccccceEEEeccccc
Confidence 9999999999999999999976543211 011111000111 11334578999999999
Q ss_pred hhcchhHHHHHHHHhhhcCceEEEeCCcccHHHHHHHHhccCCCEEEEEcCChhhHHHHHHCCccEEE--eCccc-cccC
Q 002656 819 YALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI--SGVEG-MQVG 895 (896)
Q Consensus 819 ~~l~~~~~~~~~~l~~~~~~vv~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~~L~~AdVGI~i--sg~eg-~qaa 895 (896)
.+.++++. ++..+...+||||.||+||..||+..|+ .|.+|+.+|||+||+|||++||||||| +|+++ .|||
T Consensus 668 ~~~~~qld----~il~nh~eIVFARTSPqQKLiIVe~cQr-~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAA 742 (1019)
T KOG0203|consen 668 DMSSEQLD----ELLQNHQEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAA 742 (1019)
T ss_pred ccCHHHHH----HHHHhCCceEEEecCccceEEeEhhhhh-cCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhc
Confidence 87665544 3445566789999999999999999998 899999999999999999999999965 89994 5777
Q ss_pred C
Q 002656 896 T 896 (896)
Q Consensus 896 ~ 896 (896)
|
T Consensus 743 D 743 (1019)
T KOG0203|consen 743 D 743 (1019)
T ss_pred c
Confidence 6
No 22
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=8.1e-72 Score=649.36 Aligned_cols=489 Identities=17% Similarity=0.211 Sum_probs=371.1
Q ss_pred HHhhhHHHHHHHHHHHHhccc--CCC----CCC--cccccchhhhhhHHH-HHHHHH---HHHHhcchhhhcc---c-eE
Q 002656 76 EQFNRVANIYFLIAALLSVTP--LSP----FSP--VSMLLPLAIVVGVSM-AKEALE---DWRRFMQDKEVNA---R-KV 139 (896)
Q Consensus 76 ~~f~~~~n~~~l~~~il~~~~--~~~----~~~--~~~~~~l~~vl~i~~-~~~~~~---d~~r~k~~~~~n~---~-~~ 139 (896)
.+|++|..+.++++++++++. +.. ..| +..+. ++++++++. +..+.| ++|..++.+.+.+ . ++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~-i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a 106 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFS-IFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKA 106 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceE
Confidence 456789989999999998864 110 111 22222 223333333 333333 5555554444443 2 57
Q ss_pred E-EEeCCCeEEEeecccCccCcEEEeccCCcCCceEEEEeecCCCceEEEEeccCCCCCcceeecccccCCCCCchhhhc
Q 002656 140 S-VHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFK 218 (896)
Q Consensus 140 ~-V~~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~~lL~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~ 218 (896)
+ |. |||++++|+.++|+|||+|.|++||.||||++|++ |.+.||||+|||||.|+.|.++...
T Consensus 107 ~~v~-rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vie-----G~~~VDESaLTGES~PV~K~~g~d~---------- 170 (673)
T PRK14010 107 RRIK-QDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIK-----GLATVDESAITGESAPVIKESGGDF---------- 170 (673)
T ss_pred EEEE-eCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEE-----cceEEecchhcCCCCceeccCCCcc----------
Confidence 6 55 89999999999999999999999999999999999 6689999999999999999987210
Q ss_pred cceEEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeeccceeecCCeEEEEEEEeccccceee---ccCCCCCCcCHHH
Q 002656 219 EFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQ---NATTSPSKRSGIE 295 (896)
Q Consensus 219 ~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~g~Vi~tG~~Tk~~~---~~~~~~~k~s~l~ 295 (896)
...|+||.+.+|. +.++|+.+|.+|.+.+ ..+.+..+++|+|
T Consensus 171 --------------~~V~aGT~v~~G~---------------------~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e 215 (673)
T PRK14010 171 --------------DNVIGGTSVASDW---------------------LEVEITSEPGHSFLDKMIGLVEGATRKKTPNE 215 (673)
T ss_pred --------------CeeecCceeecce---------------------EEEEEEEecccCHHHHHHHHHhhccccCCHHH
Confidence 0138999999888 9999999999996544 4556677789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCCcccCCCCCchhHHHHHHHHHHHhccccccchhhhH
Q 002656 296 KKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSI 375 (896)
Q Consensus 296 ~~~~~~~~~~~~~~ii~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~l 375 (896)
..+..+...+.++. ++++.++.. +.. |. .....+...+.+++.+||++|+..+
T Consensus 216 ~~l~~l~~~l~ii~--l~~~~~~~~-~~~--------~~----------------~~~~~~~~~val~V~~IP~aL~~~~ 268 (673)
T PRK14010 216 IALFTLLMTLTIIF--LVVILTMYP-LAK--------FL----------------NFNLSIAMLIALAVCLIPTTIGGLL 268 (673)
T ss_pred HHHHHHHHHHhHHH--HHHHHHHHH-HHh--------hc----------------cHHHHHHHHHHHHHHhhhhhHHHHH
Confidence 87766544333222 111111110 000 00 0113455667777788999999999
Q ss_pred HHHHHHHHHHHhhccccccCCCCCCceeecccccccccceeEEEecCCCcccccceEEEEEEEcCeeccCCchHHHHHHH
Q 002656 376 EIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAA 455 (896)
Q Consensus 376 ~~~~~~~~~~i~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~ 455 (896)
+++...++.++ +++++++|+...+|.||.+|+||||||||||+|++.+..+.... +
T Consensus 269 ~~~~~~g~~r~----------ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~-----~--------- 324 (673)
T PRK14010 269 SAIGIAGMDRV----------TQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVK-----S--------- 324 (673)
T ss_pred HHHHHHHHHHH----------hhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCC-----C---------
Confidence 99888888888 89999999999999999999999999999999877766543100 0
Q ss_pred HhhhhchhhhhhhhhcccccCCCCccccccccccCCCCccccccCCCccccccccccCCCCCCChHHHHHHHHHHhhcce
Q 002656 456 KQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHT 535 (896)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~C~~ 535 (896)
....+++.+.++|+.
T Consensus 325 -----------------------------------------------------------------~~~~~ll~~a~~~~~ 339 (673)
T PRK14010 325 -----------------------------------------------------------------SSFERLVKAAYESSI 339 (673)
T ss_pred -----------------------------------------------------------------ccHHHHHHHHHHhcC
Confidence 011235556666753
Q ss_pred eeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEeeeecCCCCCeeEEEEEE
Q 002656 536 AIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVR 615 (896)
Q Consensus 536 ~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~ 615 (896)
. +.||.+.|+++++++.|+.... .....+||++.+|+|++.+.
T Consensus 340 ~--------------s~~P~~~AIv~~a~~~~~~~~~-----------------------~~~~~~pF~~~~k~~gv~~~ 382 (673)
T PRK14010 340 A--------------DDTPEGRSIVKLAYKQHIDLPQ-----------------------EVGEYIPFTAETRMSGVKFT 382 (673)
T ss_pred C--------------CCChHHHHHHHHHHHcCCCchh-----------------------hhcceeccccccceeEEEEC
Confidence 2 3599999999999987654210 01123799999999999753
Q ss_pred cCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhccCHHHH
Q 002656 616 DEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREAT 695 (896)
Q Consensus 616 ~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~ 695 (896)
++ .+.|||++.++++|...+...+..+.+..++++.+|+|+++++.
T Consensus 383 ---g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~v~~----------------------------- 428 (673)
T PRK14010 383 ---TR--EVYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVLE----------------------------- 428 (673)
T ss_pred ---CE--EEEECCHHHHHHHhhhcCCCCchHHHHHHHHHHhCCCeEEEEEE-----------------------------
Confidence 33 45699999999999865444445567777889999999998772
Q ss_pred HHHHHHhhhcccEEEEeeeeccccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhh
Q 002656 696 LEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSV 775 (896)
Q Consensus 696 l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~ 775 (896)
|++++|+++++|++|+|++++|++||++||+++|+|||++.||.+||+++||..
T Consensus 429 ----------~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~---------------- 482 (673)
T PRK14010 429 ----------DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR---------------- 482 (673)
T ss_pred ----------CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce----------------
Confidence 678999999999999999999999999999999999999999999999999953
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcchhHHHHHHHHhhhcCceEEEeCCcccHHHHHHH
Q 002656 776 GKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRL 855 (896)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vv~~r~sP~qK~~iV~~ 855 (896)
+++|++|+||.++|+.
T Consensus 483 ----------------------------------------------------------------v~A~~~PedK~~iV~~ 498 (673)
T PRK14010 483 ----------------------------------------------------------------FVAECKPEDKINVIRE 498 (673)
T ss_pred ----------------------------------------------------------------EEcCCCHHHHHHHHHH
Confidence 8999999999999999
Q ss_pred HhccCCCEEEEEcCChhhHHHHHHCCccEEE-eCcccccc
Q 002656 856 VKEGTGKTTLAIGDGANDVGMIQEADIGIGI-SGVEGMQV 894 (896)
Q Consensus 856 lk~~~g~~vl~iGDG~ND~~~L~~AdVGI~i-sg~eg~qa 894 (896)
+|+ .|++|+|+|||+||+|||++|||||+| +|+|..+.
T Consensus 499 lQ~-~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAke 537 (673)
T PRK14010 499 EQA-KGHIVAMTGDGTNDAPALAEANVGLAMNSGTMSAKE 537 (673)
T ss_pred HHh-CCCEEEEECCChhhHHHHHhCCEEEEeCCCCHHHHH
Confidence 998 899999999999999999999999999 77775443
No 23
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=2.2e-69 Score=628.00 Aligned_cols=494 Identities=19% Similarity=0.244 Sum_probs=385.6
Q ss_pred HHHhhhHHHHHHHHHHHHhccc-CCC-------C--CCcccc--cchhhhhhHHHHHHHHHHHHHhcchhhhcc---c-e
Q 002656 75 FEQFNRVANIYFLIAALLSVTP-LSP-------F--SPVSML--LPLAIVVGVSMAKEALEDWRRFMQDKEVNA---R-K 138 (896)
Q Consensus 75 ~~~f~~~~n~~~l~~~il~~~~-~~~-------~--~~~~~~--~~l~~vl~i~~~~~~~~d~~r~k~~~~~n~---~-~ 138 (896)
..||++|..+.++++++++++. +.+ . .|+... +.+++.+++..+.+.+.+++..++.+.+.+ . .
T Consensus 27 ~~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~ 106 (675)
T TIGR01497 27 KAQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTF 106 (675)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCce
Confidence 4578899989999999888764 211 1 133221 223333455566677777777777666654 2 4
Q ss_pred EEEEeCCCeEEEeecccCccCcEEEeccCCcCCceEEEEeecCCCceEEEEeccCCCCCcceeecccccCCCCCchhhhc
Q 002656 139 VSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFK 218 (896)
Q Consensus 139 ~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~~lL~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~ 218 (896)
++|+++||++++|+.++|+|||+|.|++||.|||||+|++ |.+.||||+|||||.|+.|.+++...
T Consensus 107 a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vie-----G~~~VDESaLTGES~PV~K~~g~~~~--------- 172 (675)
T TIGR01497 107 AKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIE-----GVASVDESAITGESAPVIKESGGDFA--------- 172 (675)
T ss_pred EEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEE-----ccEEEEcccccCCCCceeecCCCCcc---------
Confidence 7787458999999999999999999999999999999999 67999999999999999999875320
Q ss_pred cceEEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeeccceeecCCeEEEEEEEecccccee---eccCCCCCCcCHHH
Q 002656 219 EFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVM---QNATTSPSKRSGIE 295 (896)
Q Consensus 219 ~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~g~Vi~tG~~Tk~~---~~~~~~~~k~s~l~ 295 (896)
..|+||.+.+|. +.+.|+.+|.+|.+. ...+.++.+++|+|
T Consensus 173 ---------------~V~aGT~v~~G~---------------------~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq 216 (675)
T TIGR01497 173 ---------------SVTGGTRILSDW---------------------LVVECTANPGETFLDRMIALVEGAQRRKTPNE 216 (675)
T ss_pred ---------------eeecCcEEEeeE---------------------EEEEEEEecccCHHHHHHHHHHhcccCCChHH
Confidence 148899988887 999999999999654 44456677789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCCcccCCCCCchhHHHHHHHHHHHhccccccchhhhH
Q 002656 296 KKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSI 375 (896)
Q Consensus 296 ~~~~~~~~~~~~~~ii~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~l 375 (896)
..++.+..++.++.++++++.+. +..|.. ....+...+.+++.+||++|....
T Consensus 217 ~~l~~l~~~l~~v~li~~~~~~~-~~~~~~--------------------------~~~~~~~lvallV~aiP~aLg~l~ 269 (675)
T TIGR01497 217 IALTILLIALTLVFLLVTATLWP-FAAYGG--------------------------NAISVTVLVALLVCLIPTTIGGLL 269 (675)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHhcC--------------------------hhHHHHHHHHHHHHhCchhhhhHH
Confidence 88888766554433333222111 111100 012455668889999999887766
Q ss_pred HHHHHHHHHHHhhccccccCCCCCCceeecccccccccceeEEEecCCCcccccceEEEEEEEcCeeccCCchHHHHHHH
Q 002656 376 EIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAA 455 (896)
Q Consensus 376 ~~~~~~~~~~i~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~ 455 (896)
+.+...++.++ .+.++++|+...+|.||++|+||||||||||+|+|.+..++..+. .
T Consensus 270 ~av~iag~~r~----------ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~-----~-------- 326 (675)
T TIGR01497 270 SAIGIAGMDRV----------LGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQG-----V-------- 326 (675)
T ss_pred HHHHHHHHHHH----------HHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCC-----C--------
Confidence 66666777777 899999999999999999999999999999999999998763110 0
Q ss_pred HhhhhchhhhhhhhhcccccCCCCccccccccccCCCCccccccCCCccccccccccCCCCCCChHHHHHHHHHHhhcce
Q 002656 456 KQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHT 535 (896)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~C~~ 535 (896)
...+++.+.++|+.
T Consensus 327 ------------------------------------------------------------------~~~~ll~~aa~~~~ 340 (675)
T TIGR01497 327 ------------------------------------------------------------------DEKTLADAAQLASL 340 (675)
T ss_pred ------------------------------------------------------------------cHHHHHHHHHHhcC
Confidence 01145566666643
Q ss_pred eeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEeeeecCCCCCeeEEEEEE
Q 002656 536 AIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVR 615 (896)
Q Consensus 536 ~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~ 615 (896)
. +.||.+.|++++|++.|..... ..++..+..||++.+++|++.+.
T Consensus 341 ~--------------s~hP~a~Aiv~~a~~~~~~~~~--------------------~~~~~~~~~pf~~~~~~sg~~~~ 386 (675)
T TIGR01497 341 A--------------DDTPEGKSIVILAKQLGIREDD--------------------VQSLHATFVEFTAQTRMSGINLD 386 (675)
T ss_pred C--------------CCCcHHHHHHHHHHHcCCCccc--------------------cccccceEEEEcCCCcEEEEEEe
Confidence 3 3689999999999987753211 12334567899999877776553
Q ss_pred cCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhccCHHHH
Q 002656 616 DEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREAT 695 (896)
Q Consensus 616 ~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~ 695 (896)
+| ..|.||+++.+++.|...+...+..+.+.+++++++|+|++++|+
T Consensus 387 --~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~G~r~l~va~----------------------------- 433 (675)
T TIGR01497 387 --NG--RMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVCE----------------------------- 433 (675)
T ss_pred --CC--eEEEECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhCCCeEEEEEE-----------------------------
Confidence 34 579999999999998765555666788888999999999999995
Q ss_pred HHHHHHhhhcccEEEEeeeeccccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhh
Q 002656 696 LEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSV 775 (896)
Q Consensus 696 l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~ 775 (896)
+.+++|+++++|++|+|++++|++|+++||+++|+|||+..||.++|+++|+..
T Consensus 434 ----------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~---------------- 487 (675)
T TIGR01497 434 ----------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD---------------- 487 (675)
T ss_pred ----------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE----------------
Confidence 457999999999999999999999999999999999999999999999999842
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcchhHHHHHHHHhhhcCceEEEeCCcccHHHHHHH
Q 002656 776 GKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRL 855 (896)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vv~~r~sP~qK~~iV~~ 855 (896)
+++|++|+||..+|+.
T Consensus 488 ----------------------------------------------------------------v~a~~~PedK~~~v~~ 503 (675)
T TIGR01497 488 ----------------------------------------------------------------FIAEATPEDKIALIRQ 503 (675)
T ss_pred ----------------------------------------------------------------EEcCCCHHHHHHHHHH
Confidence 8899999999999999
Q ss_pred HhccCCCEEEEEcCChhhHHHHHHCCccEEE-eCcccc
Q 002656 856 VKEGTGKTTLAIGDGANDVGMIQEADIGIGI-SGVEGM 892 (896)
Q Consensus 856 lk~~~g~~vl~iGDG~ND~~~L~~AdVGI~i-sg~eg~ 892 (896)
+|+ .|+.|+|+|||.||+|||++|||||+| +|++..
T Consensus 504 lq~-~g~~VamvGDG~NDapAL~~AdvGiAm~~gt~~a 540 (675)
T TIGR01497 504 EQA-EGKLVAMTGDGTNDAPALAQADVGVAMNSGTQAA 540 (675)
T ss_pred HHH-cCCeEEEECCCcchHHHHHhCCEeEEeCCCCHHH
Confidence 998 799999999999999999999999999 456643
No 24
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=6.5e-64 Score=583.43 Aligned_cols=431 Identities=34% Similarity=0.477 Sum_probs=359.2
Q ss_pred ccchhhhhhHHHHHHHHHHHHHhcchhhhccceEEEEeCCCeEEEeecccCccCcEEEeccCCcCCceEEEEeecCCCce
Q 002656 106 LLPLAIVVGVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGI 185 (896)
Q Consensus 106 ~~~l~~vl~i~~~~~~~~d~~r~k~~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~~lL~ss~~~G~ 185 (896)
++++++.++-...+...++..+...+..+++++++|+ |+| +++|++++|+|||+|.|++||.||||++|++ |.
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~-r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~-----g~ 76 (499)
T TIGR01494 4 ILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVL-RNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLS-----GS 76 (499)
T ss_pred EhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEE-ECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEE-----cc
Confidence 4455555555555666666666666666788999999 788 9999999999999999999999999999999 67
Q ss_pred EEEEeccCCCCCcceeecccccCCCCCchhhhccceEEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeeccceeecCC
Q 002656 186 CYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTA 265 (896)
Q Consensus 186 ~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~ 265 (896)
|.||||+|||||.|+.|++++.. |+|+.+.+|.
T Consensus 77 ~~vdes~LTGEs~pv~k~~g~~v---------------------------~~gs~~~~G~-------------------- 109 (499)
T TIGR01494 77 CFVDESNLTGESVPVLKTAGDAV---------------------------FAGTYVFNGT-------------------- 109 (499)
T ss_pred EEEEcccccCCCCCeeeccCCcc---------------------------ccCcEEeccE--------------------
Confidence 99999999999999999987665 8899999888
Q ss_pred eEEEEEEEeccccce---eeccCCCCCCcCHHHHHHHHHH-HHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCCc
Q 002656 266 HVYGSVIFTGHDSKV---MQNATTSPSKRSGIEKKMDKII-FILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDV 341 (896)
Q Consensus 266 ~~~g~Vi~tG~~Tk~---~~~~~~~~~k~s~l~~~~~~~~-~~~~~~~ii~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~ 341 (896)
+...|..+|.+|.. ..........+++++++.+++. .++++++++++++.+++|..+.... .
T Consensus 110 -~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~~--~----------- 175 (499)
T TIGR01494 110 -LIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGLWDP--N----------- 175 (499)
T ss_pred -EEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc--c-----------
Confidence 88899999999854 3333445555789999999998 7777777777777776654321100 0
Q ss_pred ccCCCCCchhHHHHHHHHHHHhccccccchhhhHHHHHHHHHHHHhhccccccCCCCCCceeecccccccccceeEEEec
Q 002656 342 YFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSD 421 (896)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~D 421 (896)
.....|.+++.+++.+|||+|+++++++...+...+ +++++++|+++.+|+||+++++|||
T Consensus 176 ---------~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~----------~~~gilvk~~~~lE~l~~v~~i~fD 236 (499)
T TIGR01494 176 ---------SIFKIFLRALILLVIAIPIALPLAVTIALAVGDARL----------AKKGIVVRSLNALEELGKVDYICSD 236 (499)
T ss_pred ---------cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH----------HHCCcEEechhhhhhccCCcEEEee
Confidence 123578999999999999999999999999998877 7889999999999999999999999
Q ss_pred CCCcccccceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhcccccCCCCccccccccccCCCCccccccCC
Q 002656 422 KTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKG 501 (896)
Q Consensus 422 KTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (896)
||||||+|+|+|.++++.+.
T Consensus 237 KTGTLT~~~~~v~~~~~~~~------------------------------------------------------------ 256 (499)
T TIGR01494 237 KTGTLTKNEMSFKKVSVLGG------------------------------------------------------------ 256 (499)
T ss_pred CCCccccCceEEEEEEecCC------------------------------------------------------------
Confidence 99999999999998864211
Q ss_pred CccccccccccCCCCCCChHHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEE
Q 002656 502 FNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIR 581 (896)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~ 581 (896)
++.++||+|.|++++++..+
T Consensus 257 ----------------------------------------------~~~s~hp~~~ai~~~~~~~~-------------- 276 (499)
T TIGR01494 257 ----------------------------------------------EYLSGHPDERALVKSAKWKI-------------- 276 (499)
T ss_pred ----------------------------------------------CcCCCChHHHHHHHHhhhcC--------------
Confidence 01257999999999986411
Q ss_pred ecCCCCCCCceeEEEEeeeecCCCCCeeEEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeE
Q 002656 582 ERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRT 661 (896)
Q Consensus 582 ~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~ 661 (896)
+...||++.+++|+++++.+++ .|+||+++.|.+.|.. +.+.++.++.+|+|+
T Consensus 277 ----------------~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~--------~~~~~~~~~~~g~~~ 329 (499)
T TIGR01494 277 ----------------LNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD--------LEEKVKELAQSGLRV 329 (499)
T ss_pred ----------------cceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH--------HHHHHHHHHhCCCEE
Confidence 1357999999999999986433 4789999999988742 234455788899999
Q ss_pred EEEEEEeCCHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHhhhcccEEEEeeeeccccCCChHHHHHHHHHcCCeEEEEc
Q 002656 662 LALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLT 741 (896)
Q Consensus 662 l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~aGIkv~mlT 741 (896)
+++|++ -+++|+++++|++|++++++|+.|+++|+++||+|
T Consensus 330 ~~~a~~---------------------------------------~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~lt 370 (499)
T TIGR01494 330 LAVASK---------------------------------------ETLLGLLGLEDPLRDDAKETISELREAGIRVIMLT 370 (499)
T ss_pred EEEEEC---------------------------------------CeEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEc
Confidence 999973 25899999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhc
Q 002656 742 GDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYAL 821 (896)
Q Consensus 742 GD~~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l 821 (896)
||+..||..+|+++||
T Consensus 371 GD~~~~a~~ia~~lgi---------------------------------------------------------------- 386 (499)
T TIGR01494 371 GDNVLTAKAIAKELGI---------------------------------------------------------------- 386 (499)
T ss_pred CCCHHHHHHHHHHcCc----------------------------------------------------------------
Confidence 9999999999998873
Q ss_pred chhHHHHHHHHhhhcCceEEEeCCcccHHHHHHHHhccCCCEEEEEcCChhhHHHHHHCCccEEEeCccccccCC
Q 002656 822 EDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQVGT 896 (896)
Q Consensus 822 ~~~~~~~~~~l~~~~~~vv~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~~L~~AdVGI~isg~eg~qaa~ 896 (896)
+||++|+||+.+|+.+|+ .|+.|+|+|||+||++||++|||||++. +.+|||
T Consensus 387 -------------------~~~~~p~~K~~~v~~l~~-~g~~v~~vGDg~nD~~al~~Advgia~~---a~~~ad 438 (499)
T TIGR01494 387 -------------------FARVTPEEKAALVEALQK-KGRVVAMTGDGVNDAPALKKADVGIAMG---AKAAAD 438 (499)
T ss_pred -------------------eeccCHHHHHHHHHHHHH-CCCEEEEECCChhhHHHHHhCCCccccc---hHHhCC
Confidence 467999999999999998 7999999999999999999999999995 455554
No 25
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-63 Score=577.64 Aligned_cols=449 Identities=23% Similarity=0.306 Sum_probs=363.7
Q ss_pred hhhhhhHHHHHHHHHHHHHhcchhhh------ccceEEEEeCCCeEEEeecccCccCcEEEeccCCcCCceEEEEeecCC
Q 002656 109 LAIVVGVSMAKEALEDWRRFMQDKEV------NARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYE 182 (896)
Q Consensus 109 l~~vl~i~~~~~~~~d~~r~k~~~~~------n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~~lL~ss~~ 182 (896)
-.+++++..+.+++|++.+.++.+.+ ..++++++++||++++|+.++|+|||+|.|++||.||+||+|++
T Consensus 177 aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~---- 252 (713)
T COG2217 177 AAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVS---- 252 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEe----
Confidence 34566677788999999888875544 34788888566779999999999999999999999999999999
Q ss_pred CceEEEEeccCCCCCcceeecccccCCCCCchhhhccceEEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeeccceee
Q 002656 183 DGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLR 262 (896)
Q Consensus 183 ~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~ 262 (896)
|...||||+|||||.|+.|.+++.+ |+||++.+|.
T Consensus 253 -G~s~vDeS~iTGEs~PV~k~~Gd~V---------------------------~aGtiN~~G~----------------- 287 (713)
T COG2217 253 -GSSSVDESMLTGESLPVEKKPGDEV---------------------------FAGTVNLDGS----------------- 287 (713)
T ss_pred -CcEEeecchhhCCCCCEecCCCCEE---------------------------eeeEEECCcc-----------------
Confidence 8899999999999999999999887 9999999998
Q ss_pred cCCeEEEEEEEeccccce---eeccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCC
Q 002656 263 NTAHVYGSVIFTGHDSKV---MQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKET 339 (896)
Q Consensus 263 nt~~~~g~Vi~tG~~Tk~---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~ii~~~i~~i~~~~~~~~~~~~~~~~~~~~~ 339 (896)
+...|+.+|.||.+ .+..+.++..++++|+..|++..++++..++++++++++|.++... .|
T Consensus 288 ----l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~~----~~------- 352 (713)
T COG2217 288 ----LTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGGG----DW------- 352 (713)
T ss_pred ----EEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcCC----cH-------
Confidence 99999999999955 5556688899999999999999999999999999998876654421 12
Q ss_pred CcccCCCCCchhHHHHHHHHHHHhccccccchhhhHHHHHHHHHHHHhhccccccCCCCCCceeecccccccccceeEEE
Q 002656 340 DVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTIL 419 (896)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~ 419 (896)
...|..++.+++..|||+|.++.+++.+.+.... +++|+++|+...+|.|+++|+|+
T Consensus 353 -------------~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~a----------A~~GILiK~g~~LE~l~~v~tvv 409 (713)
T COG2217 353 -------------ETALYRALAVLVIACPCALGLATPTAILVGIGRA----------ARRGILIKGGEALERLAKVDTVV 409 (713)
T ss_pred -------------HHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHH----------HhCceEEeChHHHHhhccCCEEE
Confidence 2478899999999999999999999999999888 89999999999999999999999
Q ss_pred ecCCCcccccceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhcccccCCCCccccccccccCCCCcccccc
Q 002656 420 SDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRI 499 (896)
Q Consensus 420 ~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (896)
||||||||+|++++..+...+. ++
T Consensus 410 FDKTGTLT~G~p~v~~v~~~~~------~e-------------------------------------------------- 433 (713)
T COG2217 410 FDKTGTLTEGKPEVTDVVALDG------DE-------------------------------------------------- 433 (713)
T ss_pred EeCCCCCcCCceEEEEEecCCC------CH--------------------------------------------------
Confidence 9999999999999998863211 00
Q ss_pred CCCccccccccccCCCCCCChHHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEE
Q 002656 500 KGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVF 579 (896)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~ 579 (896)
.+++...+ .++..++||...|++++|+..|..-..
T Consensus 434 ------------------------~~~L~laA--------------alE~~S~HPiA~AIv~~a~~~~~~~~~------- 468 (713)
T COG2217 434 ------------------------DELLALAA--------------ALEQHSEHPLAKAIVKAAAERGLPDVE------- 468 (713)
T ss_pred ------------------------HHHHHHHH--------------HHHhcCCChHHHHHHHHHHhcCCCCcc-------
Confidence 02232222 112336899999999999887621100
Q ss_pred EEecCCCCCCCceeEEEEeeeecCCCCCeeEEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCC
Q 002656 580 IRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGL 659 (896)
Q Consensus 580 i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~ 659 (896)
.|+ .+| .+-+...+ +| ..+.-|.+.-+.+. +..... .....+.+..+|.
T Consensus 469 --------------~~~---~i~----G~Gv~~~v---~g--~~v~vG~~~~~~~~----~~~~~~-~~~~~~~~~~~G~ 517 (713)
T COG2217 469 --------------DFE---EIP----GRGVEAEV---DG--ERVLVGNARLLGEE----GIDLPL-LSERIEALESEGK 517 (713)
T ss_pred --------------cee---eec----cCcEEEEE---CC--EEEEEcCHHHHhhc----CCCccc-hhhhHHHHHhcCC
Confidence 000 011 11111111 23 34445776555332 111111 4556778888999
Q ss_pred eEEEEEEEeCCHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHhhhcccEEEEeeeeccccCCChHHHHHHHHHcCCeEEE
Q 002656 660 RTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWV 739 (896)
Q Consensus 660 r~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~aGIkv~m 739 (896)
.++.++. |-+++|+++++|++|++++++|+.||+.||++.|
T Consensus 518 t~v~va~---------------------------------------dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~m 558 (713)
T COG2217 518 TVVFVAV---------------------------------------DGKLVGVIALADELRPDAKEAIAALKALGIKVVM 558 (713)
T ss_pred eEEEEEE---------------------------------------CCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEE
Confidence 9888884 5589999999999999999999999999999999
Q ss_pred EcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCceEEEEeCchhhh
Q 002656 740 LTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAY 819 (896)
Q Consensus 740 lTGD~~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~ 819 (896)
||||+..+|.+||+++||..
T Consensus 559 LTGDn~~~A~~iA~~lGId~------------------------------------------------------------ 578 (713)
T COG2217 559 LTGDNRRTAEAIAKELGIDE------------------------------------------------------------ 578 (713)
T ss_pred EcCCCHHHHHHHHHHcChHh------------------------------------------------------------
Confidence 99999999999999999942
Q ss_pred hcchhHHHHHHHHhhhcCceEEEeCCcccHHHHHHHHhccCCCEEEEEcCChhhHHHHHHCCccEEE-eCccc-cccCC
Q 002656 820 ALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI-SGVEG-MQVGT 896 (896)
Q Consensus 820 ~l~~~~~~~~~~l~~~~~~vv~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~~L~~AdVGI~i-sg~eg-~qaa~ 896 (896)
+++.+.|++|+++|+.+|+ .|++|+|||||+||+|||++|||||+| +|+|. ..+||
T Consensus 579 --------------------v~AellPedK~~~V~~l~~-~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaAD 636 (713)
T COG2217 579 --------------------VRAELLPEDKAEIVRELQA-EGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAAD 636 (713)
T ss_pred --------------------heccCCcHHHHHHHHHHHh-cCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCC
Confidence 8999999999999999997 899999999999999999999999999 57884 44443
No 26
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-63 Score=536.74 Aligned_cols=562 Identities=20% Similarity=0.241 Sum_probs=424.8
Q ss_pred CCcCCCCCCCceeeccccchhhhhHHHHHHHhhhHHHHHHHHHHHHhccc-C---CCCCCcccccchhhhhhHHHHHHHH
Q 002656 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP-L---SPFSPVSMLLPLAIVVGVSMAKEAL 122 (896)
Q Consensus 47 ~~~~~~~~g~N~i~~~k~~~~~flp~~l~~~f~~~~n~~~l~~~il~~~~-~---~~~~~~~~~~~l~~vl~i~~~~~~~ 122 (896)
..+|++.||.|++...|-+.+ ..|+..|..|..|..-.++++.... - -|-+|..+.. +...+++++...++
T Consensus 42 ~~eRlk~fG~NkleEkken~~----lKFl~Fm~~PlswVMEaAAimA~~Lang~~~~~DW~DF~g-I~~LLliNsti~Fv 116 (942)
T KOG0205|consen 42 VEERLKIFGPNKLEEKKESKF----LKFLGFMWNPLSWVMEAAAIMAIGLANGGGRPPDWQDFVG-ICCLLLINSTISFI 116 (942)
T ss_pred HHHHHHhhCchhhhhhhhhHH----HHHHHHHhchHHHHHHHHHHHHHHHhcCCCCCcchhhhhh-hheeeeecceeeee
Confidence 456889999999998888876 4577778889999998888887654 1 1234444333 33445667777788
Q ss_pred HHHHHhcchhhhc---cceEEEEeCCCeEEEeecccCccCcEEEeccCCcCCceEEEEeecCCCceEEEEeccCCCCCcc
Q 002656 123 EDWRRFMQDKEVN---ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNL 199 (896)
Q Consensus 123 ~d~~r~k~~~~~n---~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~~lL~ss~~~G~~~Vdes~LtGEs~~ 199 (896)
++++.-..-.++. ..++.|+ |||+|.+++.+.|+|||||.++.|+++|||++||+.. .+.||+|.|||||-|
T Consensus 117 eE~nAGn~aa~L~a~LA~KakVl-RDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~gD----~LkiDQSAlTGESLp 191 (942)
T KOG0205|consen 117 EENNAGNAAAALMAGLAPKAKVL-RDGKWSEQEASILVPGDILSIKLGDIIPADARLLEGD----PLKIDQSALTGESLP 191 (942)
T ss_pred eccccchHHHHHHhccCcccEEe-ecCeeeeeeccccccCceeeeccCCEecCccceecCC----ccccchhhhcCCccc
Confidence 8887766544443 3689999 8999999999999999999999999999999999855 389999999999999
Q ss_pred eeecccccCCCCCchhhhccceEEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeeccceeecCCeEEEEEEEeccccc
Q 002656 200 KVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSK 279 (896)
Q Consensus 200 ~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~g~Vi~tG~~Tk 279 (896)
+.|++++.+ |+|+.+..|+ +.++|++||..|.
T Consensus 192 vtKh~gd~v---------------------------fSgSTcKqGE---------------------~eaVViATg~~TF 223 (942)
T KOG0205|consen 192 VTKHPGDEV---------------------------FSGSTCKQGE---------------------IEAVVIATGVHTF 223 (942)
T ss_pred cccCCCCce---------------------------ecccccccce---------------------EEEEEEEecccee
Confidence 999999988 9999999999 9999999999998
Q ss_pred eeeccC--CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCCcccCCCCCchhHHHHHH
Q 002656 280 VMQNAT--TSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLV 357 (896)
Q Consensus 280 ~~~~~~--~~~~k~s~l~~~~~~~~~~~~~~~ii~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (896)
.++-.. .+.....++++-++-+..++++.++ +.+++-+...++... .-|. ..+-
T Consensus 224 ~GkAA~LVdst~~~GHFqkVLt~IGn~ci~si~-~g~lie~~vmy~~q~----R~~r-------------------~~i~ 279 (942)
T KOG0205|consen 224 FGKAAHLVDSTNQVGHFQKVLTGIGNFCICSIA-LGMLIEITVMYPIQH----RLYR-------------------DGID 279 (942)
T ss_pred ehhhHHhhcCCCCcccHHHHHHhhhhHHHHHHH-HHHHHHHHhhhhhhh----hhhh-------------------hhhh
Confidence 766443 3355678999999888766654332 333222222221111 0110 1222
Q ss_pred HHHHHhccccccchhhhHHHHHHHHHHHHhhccccccCCCCCCceeecccccccccceeEEEecCCCcccccceEEEE--
Q 002656 358 TALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLK-- 435 (896)
Q Consensus 358 ~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~-- 435 (896)
+.+++++.-||+++|..+++...+++-++ ++++++++...++|+|+.+|++|+|||||||.|++.+.+
T Consensus 280 nLlvllIGgiPiamPtVlsvTMAiGs~rL----------aqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl 349 (942)
T KOG0205|consen 280 NLLVLLIGGIPIAMPTVLSVTMAIGSHRL----------SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNL 349 (942)
T ss_pred heheeeecccccccceeeeehhhHHHHHH----------HhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCc
Confidence 34455556699999999999999999998 899999999999999999999999999999999999876
Q ss_pred --EEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhcccccCCCCccccccccccCCCCccccccCCCccccccccccC
Q 002656 436 --CSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGN 513 (896)
Q Consensus 436 --~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (896)
+++.|..
T Consensus 350 ~ev~v~gv~----------------------------------------------------------------------- 358 (942)
T KOG0205|consen 350 IEVFVKGVD----------------------------------------------------------------------- 358 (942)
T ss_pred ceeeecCCC-----------------------------------------------------------------------
Confidence 2222211
Q ss_pred CCCCCChHHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCcee
Q 002656 514 WLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVER 593 (896)
Q Consensus 514 ~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~ 593 (896)
++. ..++.|+|. .. +..+.+|.|++...++- +....
T Consensus 359 ------~D~-~~L~A~rAs----r~-----------en~DAID~A~v~~L~dP----------------------Keara 394 (942)
T KOG0205|consen 359 ------KDD-VLLTAARAS----RK-----------ENQDAIDAAIVGMLADP----------------------KEARA 394 (942)
T ss_pred ------hHH-HHHHHHHHh----hh-----------cChhhHHHHHHHhhcCH----------------------HHHhh
Confidence 000 112223321 11 13578899999876531 01256
Q ss_pred EEEEeeeecCCCCCeeEEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHH
Q 002656 594 EFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESE 673 (896)
Q Consensus 594 ~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~k~l~~~e 673 (896)
.|+.++.+|||+..||....+.+++|+.+..+||||+.|++.|.... +.++...+.+++|+++|+|.|++|++..++..
T Consensus 395 ~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~-~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~ 473 (942)
T KOG0205|consen 395 GIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDH-DIPERVHSIIDKFAERGLRSLAVARQEVPEKT 473 (942)
T ss_pred CceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccC-cchHHHHHHHHHHHHhcchhhhhhhhcccccc
Confidence 79999999999999999999999999999999999999999998754 58899999999999999999999998876531
Q ss_pred HHHHHHHHHHHHhhhccCHHHHHHHHHHhhhcccEEEEeeeeccccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHH
Q 002656 674 YSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGF 753 (896)
Q Consensus 674 ~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~ 753 (896)
+ +.-....+|+|+.-+-||+|.+..++|..-...|..|.|+|||...-+...++
T Consensus 474 ----~----------------------~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgr 527 (942)
T KOG0205|consen 474 ----K----------------------ESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGR 527 (942)
T ss_pred ----c----------------------cCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhh
Confidence 0 11235688999999999999999999999999999999999999999999999
Q ss_pred hccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcchhHHHHHHHHh
Q 002656 754 ACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLA 833 (896)
Q Consensus 754 ~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~ 833 (896)
.+|+-.+-.+--..-+.+.+ . -+.|-.... + .
T Consensus 528 rlgmgtnmypss~llG~~~~---------------------------------~---~~~~~~v~e---------l---i 559 (942)
T KOG0205|consen 528 RLGMGTNMYPSSALLGLGKD---------------------------------G---SMPGSPVDE---------L---I 559 (942)
T ss_pred hhccccCcCCchhhccCCCC---------------------------------C---CCCCCcHHH---------H---h
Confidence 99986532110000000000 0 000111110 1 1
Q ss_pred hhcCceEEEeCCcccHHHHHHHHhccCCCEEEEEcCChhhHHHHHHCCccEEEeCc-cccc
Q 002656 834 VECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGV-EGMQ 893 (896)
Q Consensus 834 ~~~~~vv~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~~L~~AdVGI~isg~-eg~q 893 (896)
. ++--|+.+.|+||..+|+.+|+ +|++++|+|||+||+|+|+.||+||++.+. ++..
T Consensus 560 e--~adgfAgVfpehKy~iV~~Lq~-r~hi~gmtgdgvndapaLKkAdigiava~atdaar 617 (942)
T KOG0205|consen 560 E--KADGFAGVFPEHKYEIVKILQE-RKHIVGMTGDGVNDAPALKKADIGIAVADATDAAR 617 (942)
T ss_pred h--hccCccccCHHHHHHHHHHHhh-cCceecccCCCcccchhhcccccceeeccchhhhc
Confidence 1 2236899999999999999998 899999999999999999999999998543 4443
No 27
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=5.5e-59 Score=559.14 Aligned_cols=438 Identities=21% Similarity=0.226 Sum_probs=352.5
Q ss_pred hhhhHHHHHHHHHHHHHhcchhhh------ccceEEEEeCCCeEEEeecccCccCcEEEeccCCcCCceEEEEeecCCCc
Q 002656 111 IVVGVSMAKEALEDWRRFMQDKEV------NARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDG 184 (896)
Q Consensus 111 ~vl~i~~~~~~~~d~~r~k~~~~~------n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~~lL~ss~~~G 184 (896)
+++++..+.+++|.+.+.++.+.+ ...+++|+ |||++++|++++|+|||+|.|++||.||||++|++ |
T Consensus 211 ~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vi-r~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~-----g 284 (741)
T PRK11033 211 MVLLLFLIGERLEGYAASRARRGVSALMALVPETATRL-RDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLS-----P 284 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEE-----C
Confidence 455566677888888887776544 34789999 89999999999999999999999999999999999 7
Q ss_pred eEEEEeccCCCCCcceeecccccCCCCCchhhhccceEEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeeccceeecC
Q 002656 185 ICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNT 264 (896)
Q Consensus 185 ~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt 264 (896)
.+.||||+|||||.|+.|.+++.+ |+||++++|.
T Consensus 285 ~~~vdes~lTGEs~Pv~k~~Gd~V---------------------------~aGt~~~~G~------------------- 318 (741)
T PRK11033 285 FASFDESALTGESIPVERATGEKV---------------------------PAGATSVDRL------------------- 318 (741)
T ss_pred cEEeecccccCCCCCEecCCCCee---------------------------ccCCEEcCce-------------------
Confidence 789999999999999999998766 9999999998
Q ss_pred CeEEEEEEEecccccee---eccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCCc
Q 002656 265 AHVYGSVIFTGHDSKVM---QNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDV 341 (896)
Q Consensus 265 ~~~~g~Vi~tG~~Tk~~---~~~~~~~~k~s~l~~~~~~~~~~~~~~~ii~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~ 341 (896)
+.+.|+.+|.+|.+. +..+.++.+++++|+.++++..++.+++++++++.+++|.++... +|
T Consensus 319 --~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~~----~~--------- 383 (741)
T PRK11033 319 --VTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLFAA----PW--------- 383 (741)
T ss_pred --EEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC----CH---------
Confidence 999999999999654 444567778899999999999999999999999998876432210 12
Q ss_pred ccCCCCCchhHHHHHHHHHHHhccccccchhhhHHHHHHHHHHHHhhccccccCCCCCCceeecccccccccceeEEEec
Q 002656 342 YFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSD 421 (896)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~D 421 (896)
...+.+++.+++..|||+|.++.+++...+.... +++++++|+.+.+|.|+++++||||
T Consensus 384 -----------~~~i~~a~svlviacPcaL~latP~a~~~~l~~a----------ar~gilik~~~alE~l~~v~~v~fD 442 (741)
T PRK11033 384 -----------QEWIYRGLTLLLIGCPCALVISTPAAITSGLAAA----------ARRGALIKGGAALEQLGRVTTVAFD 442 (741)
T ss_pred -----------HHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHH----------HHCCeEEcCcHHHHHhhCCCEEEEe
Confidence 1356778899999999999998888888777766 7899999999999999999999999
Q ss_pred CCCcccccceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhcccccCCCCccccccccccCCCCccccccCC
Q 002656 422 KTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKG 501 (896)
Q Consensus 422 KTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (896)
||||||+|+|++.++...+.. ++
T Consensus 443 KTGTLT~g~~~v~~~~~~~~~-----~~---------------------------------------------------- 465 (741)
T PRK11033 443 KTGTLTEGKPQVTDIHPATGI-----SE---------------------------------------------------- 465 (741)
T ss_pred CCCCCcCCceEEEEEEecCCC-----CH----------------------------------------------------
Confidence 999999999999987532110 00
Q ss_pred CccccccccccCCCCCCChHHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEE
Q 002656 502 FNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIR 581 (896)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~ 581 (896)
.+++...+.. +..+.||.+.|++++++..|..
T Consensus 466 ----------------------~~~l~~aa~~--------------e~~s~hPia~Ai~~~a~~~~~~------------ 497 (741)
T PRK11033 466 ----------------------SELLALAAAV--------------EQGSTHPLAQAIVREAQVRGLA------------ 497 (741)
T ss_pred ----------------------HHHHHHHHHH--------------hcCCCCHHHHHHHHHHHhcCCC------------
Confidence 0222222211 1125799999999999876532
Q ss_pred ecCCCCCCCceeEEEEeeeecCCCCCeeEE-EEEEc-CCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCC
Q 002656 582 ERYPPKGQPVEREFKILNLLDFTSKRKRMS-VIVRD-EDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGL 659 (896)
Q Consensus 582 ~~~~~~~~~~~~~~~il~~~~F~s~rkrms-viv~~-~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~ 659 (896)
+||.++++.+. .-++. .+|..+ .-|+++.+.+ ..+.+...++++..+|+
T Consensus 498 -------------------~~~~~~~~~~~g~Gv~~~~~g~~~--~ig~~~~~~~--------~~~~~~~~~~~~~~~g~ 548 (741)
T PRK11033 498 -------------------IPEAESQRALAGSGIEGQVNGERV--LICAPGKLPP--------LADAFAGQINELESAGK 548 (741)
T ss_pred -------------------CCCCcceEEEeeEEEEEEECCEEE--EEecchhhhh--------ccHHHHHHHHHHHhCCC
Confidence 34555555543 11221 234332 3478877643 11234455678899999
Q ss_pred eEEEEEEEeCCHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHhhhcccEEEEeeeeccccCCChHHHHHHHHHcCCeEEE
Q 002656 660 RTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWV 739 (896)
Q Consensus 660 r~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~aGIkv~m 739 (896)
|++++|+ |.+++|+++++|++|+|++++|+.|+++||+++|
T Consensus 549 ~~v~va~---------------------------------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~l 589 (741)
T PRK11033 549 TVVLVLR---------------------------------------NDDVLGLIALQDTLRADARQAISELKALGIKGVM 589 (741)
T ss_pred EEEEEEE---------------------------------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEE
Confidence 9999995 5689999999999999999999999999999999
Q ss_pred EcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCceEEEEeCchhhh
Q 002656 740 LTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAY 819 (896)
Q Consensus 740 lTGD~~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~ 819 (896)
+|||+..+|..+|+++||.
T Consensus 590 lTGd~~~~a~~ia~~lgi~------------------------------------------------------------- 608 (741)
T PRK11033 590 LTGDNPRAAAAIAGELGID------------------------------------------------------------- 608 (741)
T ss_pred EcCCCHHHHHHHHHHcCCC-------------------------------------------------------------
Confidence 9999999999999999983
Q ss_pred hcchhHHHHHHHHhhhcCceEEEeCCcccHHHHHHHHhccCCCEEEEEcCChhhHHHHHHCCccEEE-eCcccc
Q 002656 820 ALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI-SGVEGM 892 (896)
Q Consensus 820 ~l~~~~~~~~~~l~~~~~~vv~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~~L~~AdVGI~i-sg~eg~ 892 (896)
++++++|+||..+|+.+|+ . +.|+|||||.||+|||+.|||||++ +|++..
T Consensus 609 --------------------~~~~~~p~~K~~~v~~l~~-~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a 660 (741)
T PRK11033 609 --------------------FRAGLLPEDKVKAVTELNQ-H-APLAMVGDGINDAPAMKAASIGIAMGSGTDVA 660 (741)
T ss_pred --------------------eecCCCHHHHHHHHHHHhc-C-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHH
Confidence 4567899999999999996 3 5899999999999999999999999 455544
No 28
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.3e-60 Score=536.18 Aligned_cols=459 Identities=21% Similarity=0.259 Sum_probs=364.6
Q ss_pred hhHHHHHHHHHHHHHhcchhhh------ccceEEEEeCCCe-EEEeecccCccCcEEEeccCCcCCceEEEEeecCCCce
Q 002656 113 VGVSMAKEALEDWRRFMQDKEV------NARKVSVHVGNGV-FSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGI 185 (896)
Q Consensus 113 l~i~~~~~~~~d~~r~k~~~~~------n~~~~~V~~r~g~-~~~i~~~~L~vGDII~l~~ge~vPaD~~lL~ss~~~G~ 185 (896)
+.+..+.+++|...++|+...+ .+.++.++ .+|+ .++|+.+.|++||+|+|.+|+.||+||++++ |.
T Consensus 348 i~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii-~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~-----Gs 421 (951)
T KOG0207|consen 348 ITFITLGRWLESLAKGKTSEALSKLMSLAPSKATII-EDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVD-----GS 421 (951)
T ss_pred HHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEe-ecCCcceEeeeeeeccCCEEEECCCCccccccEEEe-----Cc
Confidence 4455677888888888875444 45789998 7886 8999999999999999999999999999999 88
Q ss_pred EEEEeccCCCCCcceeecccccCCCCCchhhhccceEEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeeccceeecCC
Q 002656 186 CYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTA 265 (896)
Q Consensus 186 ~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~ 265 (896)
++||||.+|||+.|+.|++++.+ .+|+++.+|.
T Consensus 422 s~VDEs~iTGEs~PV~Kk~gs~V---------------------------iaGsiN~nG~-------------------- 454 (951)
T KOG0207|consen 422 SEVDESLITGESMPVPKKKGSTV---------------------------IAGSINLNGT-------------------- 454 (951)
T ss_pred eeechhhccCCceecccCCCCee---------------------------eeeeecCCce--------------------
Confidence 99999999999999999999877 8999999998
Q ss_pred eEEEEEEEeccccce---eeccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCCcc
Q 002656 266 HVYGSVIFTGHDSKV---MQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVY 342 (896)
Q Consensus 266 ~~~g~Vi~tG~~Tk~---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~ii~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~ 342 (896)
.+.-++.+|.||.+ .+..+.++..+.|+|+.+|+++.++.+++++++++++++|.+..... .||
T Consensus 455 -l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~---~~~--------- 521 (951)
T KOG0207|consen 455 -LLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIV---FKY--------- 521 (951)
T ss_pred -EEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHcccc---ccC---------
Confidence 99999999999955 55666888889999999999999999999999999999998876533 222
Q ss_pred cCCCCCchhHHHHHHHHHHHhccccccchhhhHHHHHHHHHHHHhhccccccCCCCCCceeecccccccccceeEEEecC
Q 002656 343 FNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDK 422 (896)
Q Consensus 343 ~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DK 422 (896)
+..........|..++.+++.+|||+|.++.+++.+.+...- +.+|+++|..+.+|.+.+|++|+|||
T Consensus 522 --~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvg----------A~nGvLIKGge~LE~~hkv~tVvFDK 589 (951)
T KOG0207|consen 522 --PRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVG----------ATNGVLIKGGEALEKAHKVKTVVFDK 589 (951)
T ss_pred --cchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechh----------hhcceEEcCcHHHHHHhcCCEEEEcC
Confidence 111112334588899999999999999999998887776655 88999999999999999999999999
Q ss_pred CCcccccceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhcccccCCCCccccccccccCCCCccccccCCC
Q 002656 423 TGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGF 502 (896)
Q Consensus 423 TGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (896)
|||||+|++.+.++.+-+..
T Consensus 590 TGTLT~G~~~V~~~~~~~~~------------------------------------------------------------ 609 (951)
T KOG0207|consen 590 TGTLTEGKPTVVDFKSLSNP------------------------------------------------------------ 609 (951)
T ss_pred CCceecceEEEEEEEecCCc------------------------------------------------------------
Confidence 99999999999988643221
Q ss_pred ccccccccccCCCCCCChHHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEe
Q 002656 503 NFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRE 582 (896)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~ 582 (896)
-..++++...+.- +-.++||...|++++|+..+-. ++...
T Consensus 610 ------------------~~~~e~l~~v~a~--------------Es~SeHPig~AIv~yak~~~~~-----~~~~~--- 649 (951)
T KOG0207|consen 610 ------------------ISLKEALALVAAM--------------ESGSEHPIGKAIVDYAKEKLVE-----PNPEG--- 649 (951)
T ss_pred ------------------ccHHHHHHHHHHH--------------hcCCcCchHHHHHHHHHhcccc-----cCccc---
Confidence 0112333333311 1225799999999999987611 11111
Q ss_pred cCCCCCCCceeEEEEeeeecCCCCCeeEEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEE
Q 002656 583 RYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTL 662 (896)
Q Consensus 583 ~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l 662 (896)
++..-.|.-..+...+.+. ++. .+-|.-+-| ..++-...+.+...+++-...|..+.
T Consensus 650 --------------~~~~~~~pg~g~~~~~~~~---~~~--i~iGN~~~~----~r~~~~~~~~i~~~~~~~e~~g~tvv 706 (951)
T KOG0207|consen 650 --------------VLSFEYFPGEGIYVTVTVD---GNE--VLIGNKEWM----SRNGCSIPDDILDALTESERKGQTVV 706 (951)
T ss_pred --------------cceeecccCCCcccceEEe---eeE--EeechHHHH----HhcCCCCchhHHHhhhhHhhcCceEE
Confidence 1111112111111111111 111 333554433 22333345567788888889999999
Q ss_pred EEEEEeCCHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHhhhcccEEEEeeeeccccCCChHHHHHHHHHcCCeEEEEcC
Q 002656 663 ALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTG 742 (896)
Q Consensus 663 ~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~aGIkv~mlTG 742 (896)
++|. |-++.|+++++|++|+|+..+|+.||+.||++.||||
T Consensus 707 ~v~v---------------------------------------n~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTG 747 (951)
T KOG0207|consen 707 YVAV---------------------------------------NGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTG 747 (951)
T ss_pred EEEE---------------------------------------CCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcC
Confidence 9995 6789999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcc
Q 002656 743 DKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALE 822 (896)
Q Consensus 743 D~~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~ 822 (896)
||..||.++|+++|+-.
T Consensus 748 Dn~~aA~svA~~VGi~~--------------------------------------------------------------- 764 (951)
T KOG0207|consen 748 DNDAAARSVAQQVGIDN--------------------------------------------------------------- 764 (951)
T ss_pred CCHHHHHHHHHhhCcce---------------------------------------------------------------
Confidence 99999999999999432
Q ss_pred hhHHHHHHHHhhhcCceEEEeCCcccHHHHHHHHhccCCCEEEEEcCChhhHHHHHHCCccEEE-eCcccc
Q 002656 823 DDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI-SGVEGM 892 (896)
Q Consensus 823 ~~~~~~~~~l~~~~~~vv~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~~L~~AdVGI~i-sg~eg~ 892 (896)
|+|++.|+||+++|+.+|+ .+++|+|+|||+||+|||.+|||||+| .|+|..
T Consensus 765 -----------------V~aev~P~~K~~~Ik~lq~-~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vA 817 (951)
T KOG0207|consen 765 -----------------VYAEVLPEQKAEKIKEIQK-NGGPVAMVGDGINDAPALAQADVGIAIGAGSDVA 817 (951)
T ss_pred -----------------EEeccCchhhHHHHHHHHh-cCCcEEEEeCCCCccHHHHhhccceeeccccHHH
Confidence 9999999999999999998 789999999999999999999999999 577743
No 29
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=7.1e-57 Score=529.03 Aligned_cols=440 Identities=23% Similarity=0.289 Sum_probs=341.9
Q ss_pred hhhhHHHHHHHHHHHHHhcchhhh------ccceEEEEeCCC-eEEEeecccCccCcEEEeccCCcCCceEEEEeecCCC
Q 002656 111 IVVGVSMAKEALEDWRRFMQDKEV------NARKVSVHVGNG-VFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYED 183 (896)
Q Consensus 111 ~vl~i~~~~~~~~d~~r~k~~~~~------n~~~~~V~~r~g-~~~~i~~~~L~vGDII~l~~ge~vPaD~~lL~ss~~~ 183 (896)
+++++..+..+++.+.++++.+.+ +..+++|+ |+| ++++|++++|+|||+|.|++||.|||||+|++
T Consensus 23 ~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~-r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi~----- 96 (556)
T TIGR01525 23 LLLFLFLLGETLEERAKGRASDALSALLALAPSTARVL-QGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVIS----- 96 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEE-ECCCeEEEEEHHHCCCCCEEEECCCCEeccceEEEe-----
Confidence 334444455566666666655443 34679999 774 99999999999999999999999999999999
Q ss_pred ceEEEEeccCCCCCcceeecccccCCCCCchhhhccceEEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeeccceeec
Q 002656 184 GICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRN 263 (896)
Q Consensus 184 G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~n 263 (896)
|.+.||||+||||+.|+.|.+++.. |+||.+.+|.
T Consensus 97 g~~~vdes~lTGEs~pv~k~~g~~v---------------------------~aGt~v~~g~------------------ 131 (556)
T TIGR01525 97 GESEVDESALTGESMPVEKKEGDEV---------------------------FAGTINGDGS------------------ 131 (556)
T ss_pred cceEEeehhccCCCCCEecCCcCEE---------------------------eeceEECCce------------------
Confidence 6789999999999999999887554 9999999888
Q ss_pred CCeEEEEEEEeccccceeeccC---CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCC
Q 002656 264 TAHVYGSVIFTGHDSKVMQNAT---TSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETD 340 (896)
Q Consensus 264 t~~~~g~Vi~tG~~Tk~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~ii~~~i~~i~~~~~~~~~~~~~~~~~~~~~~ 340 (896)
+.++|+.||.+|.+++..+ ....+++++++.+++++.+++++.++++++.+++|.+...
T Consensus 132 ---~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~--------------- 193 (556)
T TIGR01525 132 ---LTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGA--------------- 193 (556)
T ss_pred ---EEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------------
Confidence 9999999999997765433 4556789999999999999999999999888877643211
Q ss_pred cccCCCCCchhHHHHHHHHHHHhccccccchhhhHHHHHHHHHHHHhhccccccCCCCCCceeecccccccccceeEEEe
Q 002656 341 VYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILS 420 (896)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~ 420 (896)
...+..++.+++..|||+|+++++++...+...+ .++++++|+++.+|.||++|++||
T Consensus 194 ------------~~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~----------~~~gilvk~~~~le~l~~v~~i~f 251 (556)
T TIGR01525 194 ------------LGALYRALAVLVVACPCALGLATPVAILVAIGVA----------ARRGILIKGGDALEKLAKVKTVVF 251 (556)
T ss_pred ------------chHHHHHHHHHhhccccchhehhHHHHHHHHHHH----------HHCCceecCchHHHHhhcCCEEEE
Confidence 0367788899999999999999999999999888 889999999999999999999999
Q ss_pred cCCCcccccceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhcccccCCCCccccccccccCCCCccccccC
Q 002656 421 DKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIK 500 (896)
Q Consensus 421 DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (896)
|||||||+|+|++.++...+... .
T Consensus 252 DKTGTLT~~~~~v~~~~~~~~~~---~----------------------------------------------------- 275 (556)
T TIGR01525 252 DKTGTLTTGKPTVVDVEPLDDAS---I----------------------------------------------------- 275 (556)
T ss_pred eCCCCCcCCceEEEEEEecCCCC---c-----------------------------------------------------
Confidence 99999999999999886432110 0
Q ss_pred CCccccccccccCCCCCCChHHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEE
Q 002656 501 GFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFI 580 (896)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i 580 (896)
...+++...+.+. ..+.||.+.|+++++++.|.....
T Consensus 276 ---------------------~~~~~l~~a~~~e--------------~~~~hp~~~Ai~~~~~~~~~~~~~-------- 312 (556)
T TIGR01525 276 ---------------------SEEELLALAAALE--------------QSSSHPLARAIVRYAKKRGLELPK-------- 312 (556)
T ss_pred ---------------------cHHHHHHHHHHHh--------------ccCCChHHHHHHHHHHhcCCCccc--------
Confidence 0012222222221 124699999999999987653211
Q ss_pred EecCCCCCCCceeEEEEeeeecCCCCCeeEEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCe
Q 002656 581 RERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLR 660 (896)
Q Consensus 581 ~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r 660 (896)
.++ ...+ ..+.+...+ +|. ..+..|+++.+ ..+..........+..+..+|+|
T Consensus 313 -------------~~~-~~~~----~~~gi~~~~---~g~-~~~~lg~~~~~-----~~~~~~~~~~~~~~~~~~~~g~~ 365 (556)
T TIGR01525 313 -------------QED-VEEV----PGKGVEATV---DGQ-EEVRIGNPRLL-----ELAAEPISASPDLLNEGESQGKT 365 (556)
T ss_pred -------------ccC-eeEe----cCCeEEEEE---CCe-eEEEEecHHHH-----hhcCCCchhhHHHHHHHhhCCcE
Confidence 000 0000 011222222 110 12333555443 11111122234566788899999
Q ss_pred EEEEEEEeCCHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHhhhcccEEEEeeeeccccCCChHHHHHHHHHcC-CeEEE
Q 002656 661 TLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAG-LKIWV 739 (896)
Q Consensus 661 ~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~aG-Ikv~m 739 (896)
++.+|. |.+++|.+.++|+++||++++|+.|+++| ++++|
T Consensus 366 ~~~v~~---------------------------------------~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~i 406 (556)
T TIGR01525 366 VVFVAV---------------------------------------DGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVM 406 (556)
T ss_pred EEEEEE---------------------------------------CCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEE
Confidence 999984 56899999999999999999999999999 99999
Q ss_pred EcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCceEEEEeCchhhh
Q 002656 740 LTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAY 819 (896)
Q Consensus 740 lTGD~~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~ 819 (896)
+|||+..+|..+++++|+-.
T Consensus 407 vTgd~~~~a~~i~~~lgi~~------------------------------------------------------------ 426 (556)
T TIGR01525 407 LTGDNRSAAEAVAAELGIDE------------------------------------------------------------ 426 (556)
T ss_pred EeCCCHHHHHHHHHHhCCCe------------------------------------------------------------
Confidence 99999999999999999832
Q ss_pred hcchhHHHHHHHHhhhcCceEEEeCCcccHHHHHHHHhccCCCEEEEEcCChhhHHHHHHCCccEEEe
Q 002656 820 ALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS 887 (896)
Q Consensus 820 ~l~~~~~~~~~~l~~~~~~vv~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~~L~~AdVGI~is 887 (896)
+|+++.|++|..+++.++. .++.|+|+|||.||++|++.|||||++.
T Consensus 427 --------------------~f~~~~p~~K~~~v~~l~~-~~~~v~~vGDg~nD~~al~~A~vgia~g 473 (556)
T TIGR01525 427 --------------------VHAELLPEDKLAIVKELQE-EGGVVAMVGDGINDAPALAAADVGIAMG 473 (556)
T ss_pred --------------------eeccCCHHHHHHHHHHHHH-cCCEEEEEECChhHHHHHhhCCEeEEeC
Confidence 7889999999999999997 7889999999999999999999999884
No 30
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=2.8e-56 Score=522.03 Aligned_cols=426 Identities=22% Similarity=0.283 Sum_probs=338.3
Q ss_pred hhhhhHHHHHHHHHHHHHhcchhhh------ccceEEEEeCCCeEEEeecccCccCcEEEeccCCcCCceEEEEeecCCC
Q 002656 110 AIVVGVSMAKEALEDWRRFMQDKEV------NARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYED 183 (896)
Q Consensus 110 ~~vl~i~~~~~~~~d~~r~k~~~~~------n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~~lL~ss~~~ 183 (896)
.+++++..+.+++|++.++++.+.+ ...++++++++|.+++|+.++|+|||+|.|++||.|||||+|++
T Consensus 58 ~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~----- 132 (562)
T TIGR01511 58 AMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE----- 132 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE-----
Confidence 3445556667788887666655433 34688888556788999999999999999999999999999999
Q ss_pred ceEEEEeccCCCCCcceeecccccCCCCCchhhhccceEEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeeccceeec
Q 002656 184 GICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRN 263 (896)
Q Consensus 184 G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~n 263 (896)
|.+.||||.||||+.|+.|++++.. |+||++.+|.
T Consensus 133 g~~~vdes~lTGEs~pv~k~~gd~V---------------------------~aGt~~~~g~------------------ 167 (562)
T TIGR01511 133 GESEVDESLVTGESLPVPKKVGDPV---------------------------IAGTVNGTGS------------------ 167 (562)
T ss_pred CceEEehHhhcCCCCcEEcCCCCEE---------------------------EeeeEECCce------------------
Confidence 7799999999999999999998765 9999999998
Q ss_pred CCeEEEEEEEeccccceee---ccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCC
Q 002656 264 TAHVYGSVIFTGHDSKVMQ---NATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETD 340 (896)
Q Consensus 264 t~~~~g~Vi~tG~~Tk~~~---~~~~~~~k~s~l~~~~~~~~~~~~~~~ii~~~i~~i~~~~~~~~~~~~~~~~~~~~~~ 340 (896)
+.+.|+.+|.+|.+.+ ....++.+++++++.++++..++++++++++++.+++|.
T Consensus 168 ---~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~------------------- 225 (562)
T TIGR01511 168 ---LVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL------------------- 225 (562)
T ss_pred ---EEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------
Confidence 9999999999997654 344566778999999999999999998888888776542
Q ss_pred cccCCCCCchhHHHHHHHHHHHhccccccchhhhHHHHHHHHHHHHhhccccccCCCCCCceeecccccccccceeEEEe
Q 002656 341 VYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILS 420 (896)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~ 420 (896)
..+.+++.+++..|||+|+++++++...+...+ +++++++|+++.+|.|+++|+|||
T Consensus 226 -------------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~a----------a~~gIlik~~~~lE~l~~v~~i~f 282 (562)
T TIGR01511 226 -------------FALEFAVTVLIIACPCALGLATPTVIAVATGLA----------AKNGVLIKDGDALERAANIDTVVF 282 (562)
T ss_pred -------------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHH----------HHCCeEEcChHHHHHhhCCCEEEE
Confidence 256778999999999999999999999998888 899999999999999999999999
Q ss_pred cCCCcccccceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhcccccCCCCccccccccccCCCCccccccC
Q 002656 421 DKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIK 500 (896)
Q Consensus 421 DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (896)
|||||||+|+|++..+...+.. +
T Consensus 283 DKTGTLT~g~~~v~~i~~~~~~-----~---------------------------------------------------- 305 (562)
T TIGR01511 283 DKTGTLTQGKPTVTDVHVFGDR-----D---------------------------------------------------- 305 (562)
T ss_pred CCCCCCcCCCEEEEEEecCCCC-----C----------------------------------------------------
Confidence 9999999999999987532110 0
Q ss_pred CCccccccccccCCCCCCChHHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEE
Q 002656 501 GFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFI 580 (896)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i 580 (896)
..+++..++... ..+.||.+.|+++++++.|.....
T Consensus 306 ----------------------~~~~l~~aa~~e--------------~~s~HPia~Ai~~~~~~~~~~~~~-------- 341 (562)
T TIGR01511 306 ----------------------RTELLALAAALE--------------AGSEHPLAKAIVSYAKEKGITLVE-------- 341 (562)
T ss_pred ----------------------HHHHHHHHHHHh--------------ccCCChHHHHHHHHHHhcCCCcCC--------
Confidence 012233222111 124699999999999877643211
Q ss_pred EecCCCCCCCceeEEEEeeeecCCCCCeeEEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCe
Q 002656 581 RERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLR 660 (896)
Q Consensus 581 ~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r 660 (896)
...++ .+ ..+.+...+ +| .-+..|+++.+.+. +... .++..+|.+
T Consensus 342 -----------~~~~~---~~----~g~Gi~~~~---~g--~~~~iG~~~~~~~~----~~~~--------~~~~~~g~~ 386 (562)
T TIGR01511 342 -----------VSDFK---AI----PGIGVEGTV---EG--TKIQLGNEKLLGEN----AIKI--------DGKAEQGST 386 (562)
T ss_pred -----------CCCeE---EE----CCceEEEEE---CC--EEEEEECHHHHHhC----CCCC--------ChhhhCCCE
Confidence 00011 00 122233322 22 23455777665321 1111 124468999
Q ss_pred EEEEEEEeCCHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHhhhcccEEEEeeeeccccCCChHHHHHHHHHcCCeEEEE
Q 002656 661 TLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVL 740 (896)
Q Consensus 661 ~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~aGIkv~ml 740 (896)
++.++. |.+++|+++++|++||+++++|+.|++.|++++|+
T Consensus 387 ~~~~~~---------------------------------------~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~il 427 (562)
T TIGR01511 387 SVLVAV---------------------------------------NGELAGVFALEDQLRPEAKEVIQALKRRGIEPVML 427 (562)
T ss_pred EEEEEE---------------------------------------CCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEE
Confidence 888873 77899999999999999999999999999999999
Q ss_pred cCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhh
Q 002656 741 TGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYA 820 (896)
Q Consensus 741 TGD~~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~ 820 (896)
|||+..+|..+|+++||-
T Consensus 428 Sgd~~~~a~~ia~~lgi~-------------------------------------------------------------- 445 (562)
T TIGR01511 428 TGDNRKTAKAVAKELGIN-------------------------------------------------------------- 445 (562)
T ss_pred cCCCHHHHHHHHHHcCCc--------------------------------------------------------------
Confidence 999999999999999972
Q ss_pred cchhHHHHHHHHhhhcCceEEEeCCcccHHHHHHHHhccCCCEEEEEcCChhhHHHHHHCCccEEEe
Q 002656 821 LEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS 887 (896)
Q Consensus 821 l~~~~~~~~~~l~~~~~~vv~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~~L~~AdVGI~is 887 (896)
+++++.|++|..+++.++. .++.|+|||||.||++|++.|||||++.
T Consensus 446 -------------------~~~~~~p~~K~~~v~~l~~-~~~~v~~VGDg~nD~~al~~A~vgia~g 492 (562)
T TIGR01511 446 -------------------VRAEVLPDDKAALIKELQE-KGRVVAMVGDGINDAPALAQADVGIAIG 492 (562)
T ss_pred -------------------EEccCChHHHHHHHHHHHH-cCCEEEEEeCCCccHHHHhhCCEEEEeC
Confidence 5677899999999999998 7899999999999999999999999884
No 31
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=2.6e-55 Score=512.34 Aligned_cols=413 Identities=21% Similarity=0.261 Sum_probs=328.6
Q ss_pred HHHHHHHHHHHhcchhhh------ccceEEEEeCCCeEEEeecccCccCcEEEeccCCcCCceEEEEeecCCCceEEEEe
Q 002656 117 MAKEALEDWRRFMQDKEV------NARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVET 190 (896)
Q Consensus 117 ~~~~~~~d~~r~k~~~~~------n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~~lL~ss~~~G~~~Vde 190 (896)
.+..+++.+.++++.+.+ ++.+++|+ |+|+++++++++|+|||+|.|++||.|||||+|++ |.+.|||
T Consensus 29 ~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~-r~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii~-----g~~~vde 102 (536)
T TIGR01512 29 SIGETLEEYASGRARRALKALMELAPDTARVL-RGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLS-----GTSTVDE 102 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEE-ECCEEEEEEHHHCCCCCEEEEcCCCEeecceEEEe-----CcEEEEe
Confidence 344455555555544333 45889999 89999999999999999999999999999999999 7799999
Q ss_pred ccCCCCCcceeecccccCCCCCchhhhccceEEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeeccceeecCCeEEEE
Q 002656 191 MNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGS 270 (896)
Q Consensus 191 s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~g~ 270 (896)
|+||||+.|+.|.+++.. |+||.+.+|. +.++
T Consensus 103 s~lTGEs~pv~k~~g~~v---------------------------~aGt~v~~G~---------------------~~~~ 134 (536)
T TIGR01512 103 SALTGESVPVEKAPGDEV---------------------------FAGAINLDGV---------------------LTIV 134 (536)
T ss_pred cccCCCCCcEEeCCCCEE---------------------------EeeeEECCce---------------------EEEE
Confidence 999999999999987654 9999999998 9999
Q ss_pred EEEeccccceeecc---CCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCCcccCCCC
Q 002656 271 VIFTGHDSKVMQNA---TTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGK 347 (896)
Q Consensus 271 Vi~tG~~Tk~~~~~---~~~~~k~s~l~~~~~~~~~~~~~~~ii~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (896)
|+.||.+|.+++.. .....+++++++.++++..+++++.++++++.++++.++.. |
T Consensus 135 V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~--------------- 193 (536)
T TIGR01512 135 VTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLKR------W--------------- 193 (536)
T ss_pred EEEeccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------c---------------
Confidence 99999999776543 34556789999999999999999998888877776543211 1
Q ss_pred CchhHHHHHHHHHHHhccccccchhhhHHHHHHHHHHHHhhccccccCCCCCCceeecccccccccceeEEEecCCCccc
Q 002656 348 PLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLT 427 (896)
Q Consensus 348 ~~~~~~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~DKTGTLT 427 (896)
...+.+++.+++.+|||+|+++++++...+..++ +++++++|+++.+|.||+++++|||||||||
T Consensus 194 -----~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~----------~k~gilik~~~~le~l~~v~~i~fDKTGTLT 258 (536)
T TIGR01512 194 -----PFWVYRALVLLVVASPCALVISAPAAYLSAISAA----------ARHGILIKGGAALEALAKIKTVAFDKTGTLT 258 (536)
T ss_pred -----HHHHHHHHHHHhhcCccccccchHHHHHHHHHHH----------HHCCeEEcCcHHHHhhcCCCEEEECCCCCCc
Confidence 1267778899999999999999999999998888 8999999999999999999999999999999
Q ss_pred ccceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhcccccCCCCccccccccccCCCCccccccCCCccccc
Q 002656 428 CNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDS 507 (896)
Q Consensus 428 ~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (896)
+|+|++.++...
T Consensus 259 ~~~~~v~~~~~~-------------------------------------------------------------------- 270 (536)
T TIGR01512 259 TGRPKVVDVVPA-------------------------------------------------------------------- 270 (536)
T ss_pred CCceEEEEeeHH--------------------------------------------------------------------
Confidence 999999877410
Q ss_pred cccccCCCCCCChHHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCC
Q 002656 508 RLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPK 587 (896)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~ 587 (896)
+++...+.+. ..+.||.+.|+++++++.+ .+
T Consensus 271 -----------------~~l~~a~~~e--------------~~~~hp~~~Ai~~~~~~~~-~~----------------- 301 (536)
T TIGR01512 271 -----------------EVLRLAAAAE--------------QASSHPLARAIVDYARKRE-NV----------------- 301 (536)
T ss_pred -----------------HHHHHHHHHh--------------ccCCCcHHHHHHHHHHhcC-CC-----------------
Confidence 1222222111 1246999999999988654 10
Q ss_pred CCCceeEEEEeeeecCCCCCeeEEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEE
Q 002656 588 GQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYK 667 (896)
Q Consensus 588 ~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~k 667 (896)
... ..+| .+.+...+ +|.. +..|+++.+.+. + ...+..+|.+++.++
T Consensus 302 -----~~~---~~~~----g~gi~~~~---~g~~--~~ig~~~~~~~~----~----------~~~~~~~~~~~~~v~-- 348 (536)
T TIGR01512 302 -----ESV---EEVP----GEGVRAVV---DGGE--VRIGNPRSLEAA----V----------GARPESAGKTIVHVA-- 348 (536)
T ss_pred -----cce---EEec----CCeEEEEE---CCeE--EEEcCHHHHhhc----C----------CcchhhCCCeEEEEE--
Confidence 000 0011 11222222 2332 234766443221 1 014566788877666
Q ss_pred eCCHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHhhhcccEEEEeeeeccccCCChHHHHHHHHHcCC-eEEEEcCCcHH
Q 002656 668 QLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGL-KIWVLTGDKME 746 (896)
Q Consensus 668 ~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~aGI-kv~mlTGD~~~ 746 (896)
.|..++|.+.++|++|+|++++|+.|+++|+ +++|+|||+..
T Consensus 349 -------------------------------------~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~ 391 (536)
T TIGR01512 349 -------------------------------------RDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRA 391 (536)
T ss_pred -------------------------------------ECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHH
Confidence 3678999999999999999999999999999 99999999999
Q ss_pred HHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcchhHH
Q 002656 747 TAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMK 826 (896)
Q Consensus 747 tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~ 826 (896)
+|..+++++|+..
T Consensus 392 ~a~~i~~~lgi~~------------------------------------------------------------------- 404 (536)
T TIGR01512 392 VAERVARELGIDE------------------------------------------------------------------- 404 (536)
T ss_pred HHHHHHHHcCChh-------------------------------------------------------------------
Confidence 9999999999842
Q ss_pred HHHHHHhhhcCceEEEeCCcccHHHHHHHHhccCCCEEEEEcCChhhHHHHHHCCccEEEe
Q 002656 827 HHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS 887 (896)
Q Consensus 827 ~~~~~l~~~~~~vv~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~~L~~AdVGI~is 887 (896)
+|+++.|++|..+++.++. .++.|+|+|||.||++|++.||+||++.
T Consensus 405 -------------~f~~~~p~~K~~~i~~l~~-~~~~v~~vGDg~nD~~al~~A~vgia~g 451 (536)
T TIGR01512 405 -------------VHAELLPEDKLEIVKELRE-KYGPVAMVGDGINDAPALAAADVGIAMG 451 (536)
T ss_pred -------------hhhccCcHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHHHhCCEEEEeC
Confidence 6778899999999999998 7899999999999999999999999985
No 32
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=1.2e-54 Score=532.45 Aligned_cols=447 Identities=20% Similarity=0.254 Sum_probs=353.9
Q ss_pred hhhhhHHHHHHHHHHHHHhcchhhhc------cceEEEEeCCCeEEEeecccCccCcEEEeccCCcCCceEEEEeecCCC
Q 002656 110 AIVVGVSMAKEALEDWRRFMQDKEVN------ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYED 183 (896)
Q Consensus 110 ~~vl~i~~~~~~~~d~~r~k~~~~~n------~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~~lL~ss~~~ 183 (896)
.+++++..+.+++|.+.+.++.+.+. ..+++|+ |+|.+++|+.++|+|||+|.|++||.|||||+|++
T Consensus 290 ~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~-~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~----- 363 (834)
T PRK10671 290 AMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVV-TDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQ----- 363 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEE-eCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEE-----
Confidence 34556667788888888877665443 4778999 79999999999999999999999999999999999
Q ss_pred ceEEEEeccCCCCCcceeecccccCCCCCchhhhccceEEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeeccceeec
Q 002656 184 GICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRN 263 (896)
Q Consensus 184 G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~n 263 (896)
|.+.||||+||||+.|+.|.+++.+ |+||++.+|.
T Consensus 364 g~~~vdeS~lTGEs~pv~k~~gd~V---------------------------~aGt~~~~G~------------------ 398 (834)
T PRK10671 364 GEAWLDEAMLTGEPIPQQKGEGDSV---------------------------HAGTVVQDGS------------------ 398 (834)
T ss_pred ceEEEeehhhcCCCCCEecCCCCEE---------------------------Eecceeccee------------------
Confidence 7799999999999999999998766 9999999998
Q ss_pred CCeEEEEEEEeccccceee---ccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCC
Q 002656 264 TAHVYGSVIFTGHDSKVMQ---NATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETD 340 (896)
Q Consensus 264 t~~~~g~Vi~tG~~Tk~~~---~~~~~~~k~s~l~~~~~~~~~~~~~~~ii~~~i~~i~~~~~~~~~~~~~~~~~~~~~~ 340 (896)
+.+.|+.+|.+|.+.+ ..+.++..++++++.++++..++++++++++++++++|.+... +
T Consensus 399 ---~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~~------~-------- 461 (834)
T PRK10671 399 ---VLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGP------A-------- 461 (834)
T ss_pred ---EEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------c--------
Confidence 9999999999996543 4445666789999999999999999999999888877654211 0
Q ss_pred cccCCCCCchhHHHHHHHHHHHhccccccchhhhHHHHHHHHHHHHhhccccccCCCCCCceeecccccccccceeEEEe
Q 002656 341 VYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILS 420 (896)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~ 420 (896)
......+.+++.+++.+|||+|+++++++...+...+ +++++++|+.+.+|.|++++++||
T Consensus 462 ---------~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~----------a~~gilvk~~~~le~l~~v~~v~f 522 (834)
T PRK10671 462 ---------PQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRA----------AEFGVLVRDADALQRASTLDTLVF 522 (834)
T ss_pred ---------hHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHH----------HHCCeEEecHHHHHhhcCCCEEEE
Confidence 0113467789999999999999999999999999888 899999999999999999999999
Q ss_pred cCCCcccccceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhcccccCCCCccccccccccCCCCccccccC
Q 002656 421 DKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIK 500 (896)
Q Consensus 421 DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (896)
|||||||+|+|++..+...+.. ++
T Consensus 523 DKTGTLT~g~~~v~~~~~~~~~-----~~--------------------------------------------------- 546 (834)
T PRK10671 523 DKTGTLTEGKPQVVAVKTFNGV-----DE--------------------------------------------------- 546 (834)
T ss_pred cCCCccccCceEEEEEEccCCC-----CH---------------------------------------------------
Confidence 9999999999999877532100 00
Q ss_pred CCccccccccccCCCCCCChHHHHHHHH-HHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEE
Q 002656 501 GFNFEDSRLMDGNWLKEPNVDTLLLFFR-ILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVF 579 (896)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~la~C~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~ 579 (896)
.+++. +.+++. .+.||.+.|++++++..... .
T Consensus 547 -----------------------~~~l~~a~~~e~---------------~s~hp~a~Ai~~~~~~~~~~--~------- 579 (834)
T PRK10671 547 -----------------------AQALRLAAALEQ---------------GSSHPLARAILDKAGDMTLP--Q------- 579 (834)
T ss_pred -----------------------HHHHHHHHHHhC---------------CCCCHHHHHHHHHHhhCCCC--C-------
Confidence 01222 222221 14799999999988643210 0
Q ss_pred EEecCCCCCCCceeEEEEeeeecCCCCCeeEEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCC
Q 002656 580 IRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGL 659 (896)
Q Consensus 580 i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~ 659 (896)
...++... .+.+...+ +|. .+..|+++.+.+. +. ..+.+...++++..+|.
T Consensus 580 ------------~~~~~~~~-------g~Gv~~~~---~g~--~~~~G~~~~~~~~----~~-~~~~~~~~~~~~~~~g~ 630 (834)
T PRK10671 580 ------------VNGFRTLR-------GLGVSGEA---EGH--ALLLGNQALLNEQ----QV-DTKALEAEITAQASQGA 630 (834)
T ss_pred ------------cccceEec-------ceEEEEEE---CCE--EEEEeCHHHHHHc----CC-ChHHHHHHHHHHHhCCC
Confidence 01111110 11122221 343 3456998876432 11 12345666778889999
Q ss_pred eEEEEEEEeCCHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHhhhcccEEEEeeeeccccCCChHHHHHHHHHcCCeEEE
Q 002656 660 RTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWV 739 (896)
Q Consensus 660 r~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~aGIkv~m 739 (896)
+++.+|+ |..++|+++++|++|++++++|+.|++.|++++|
T Consensus 631 ~~v~va~---------------------------------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~ 671 (834)
T PRK10671 631 TPVLLAV---------------------------------------DGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVM 671 (834)
T ss_pred eEEEEEE---------------------------------------CCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEE
Confidence 9999995 4568999999999999999999999999999999
Q ss_pred EcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCceEEEEeCchhhh
Q 002656 740 LTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAY 819 (896)
Q Consensus 740 lTGD~~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~ 819 (896)
+|||+..+|..+|+++||..
T Consensus 672 ~Tgd~~~~a~~ia~~lgi~~------------------------------------------------------------ 691 (834)
T PRK10671 672 LTGDNPTTANAIAKEAGIDE------------------------------------------------------------ 691 (834)
T ss_pred EcCCCHHHHHHHHHHcCCCE------------------------------------------------------------
Confidence 99999999999999999842
Q ss_pred hcchhHHHHHHHHhhhcCceEEEeCCcccHHHHHHHHhccCCCEEEEEcCChhhHHHHHHCCccEEEe-Ccc-ccccC
Q 002656 820 ALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS-GVE-GMQVG 895 (896)
Q Consensus 820 ~l~~~~~~~~~~l~~~~~~vv~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~~L~~AdVGI~is-g~e-g~qaa 895 (896)
+++++.|++|..+++.++. .++.|+|+|||.||++|++.|||||++. |++ ...+|
T Consensus 692 --------------------~~~~~~p~~K~~~i~~l~~-~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~a 748 (834)
T PRK10671 692 --------------------VIAGVLPDGKAEAIKRLQS-QGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETA 748 (834)
T ss_pred --------------------EEeCCCHHHHHHHHHHHhh-cCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhC
Confidence 7888999999999999998 7889999999999999999999999993 443 33443
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.8e-52 Score=441.84 Aligned_cols=462 Identities=20% Similarity=0.262 Sum_probs=347.1
Q ss_pred chhhhhhHHHHHHHHHHHHHhcchhhhc----cceEEEEeCCCeEEEeecccCccCcEEEeccCCcCCceEEEEeecCCC
Q 002656 108 PLAIVVGVSMAKEALEDWRRFMQDKEVN----ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYED 183 (896)
Q Consensus 108 ~l~~vl~i~~~~~~~~d~~r~k~~~~~n----~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~~lL~ss~~~ 183 (896)
.|+|.+++..+-|++.+-|-+.+-..+. ...+++++.+|.++.+++.+|+.||||.|+.||.||+|+-+++
T Consensus 71 ~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIe----- 145 (681)
T COG2216 71 ILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIE----- 145 (681)
T ss_pred HHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEe-----
Confidence 3455566666677776654443322222 2346666456999999999999999999999999999999999
Q ss_pred ceEEEEeccCCCCCcceeecccccCCCCCchhhhccceEEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeeccceeec
Q 002656 184 GICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRN 263 (896)
Q Consensus 184 G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~n 263 (896)
|.++||||++||||.|+.|.++...... --||.++
T Consensus 146 G~asVdESAITGESaPViresGgD~ssV------------------------tGgT~v~--------------------- 180 (681)
T COG2216 146 GVASVDESAITGESAPVIRESGGDFSSV------------------------TGGTRVL--------------------- 180 (681)
T ss_pred eeeecchhhccCCCcceeeccCCCcccc------------------------cCCcEEe---------------------
Confidence 8899999999999999999987443110 1223222
Q ss_pred CCeEEEEEEEecccc---ceeeccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCC
Q 002656 264 TAHVYGSVIFTGHDS---KVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETD 340 (896)
Q Consensus 264 t~~~~g~Vi~tG~~T---k~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~ii~~~i~~i~~~~~~~~~~~~~~~~~~~~~~ 340 (896)
++|+...++..-.+| ++....+.+..+++|-|..++.+..-+.++.+ +++++...+..|.. .
T Consensus 181 SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL-~~~~Tl~p~a~y~~---------g----- 245 (681)
T COG2216 181 SDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFL-LAVATLYPFAIYSG---------G----- 245 (681)
T ss_pred eeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHH-HHHHhhhhHHHHcC---------C-----
Confidence 688999999888888 44566778888899988888766544432211 11111111111110 0
Q ss_pred cccCCCCCchhHHHHHHHHHHHhccccccchhhhHHHHHHHHHHHHhhccccccCCCCCCceeecccccccccceeEEEe
Q 002656 341 VYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILS 420 (896)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~v~~~~~~e~Lg~v~~i~~ 420 (896)
.-..+...+.+++++||..+.-.++..-..++-++ .+.+++.++..+.|..|.||+++.
T Consensus 246 -----------~~~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv----------~~~NViA~SGRAVEaaGDvdtliL 304 (681)
T COG2216 246 -----------GAASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRV----------TQFNVIATSGRAVEAAGDVDTLLL 304 (681)
T ss_pred -----------CCcCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHh----------hhhceeecCcchhhhcCCccEEEe
Confidence 01234456677888999988877776666666666 788999999999999999999999
Q ss_pred cCCCcccccceEEEEEEEcCeeccCCchHHHHHHHHhhhhchhhhhhhhhcccccCCCCccccccccccCCCCccccccC
Q 002656 421 DKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIK 500 (896)
Q Consensus 421 DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (896)
|||||+|-|+-.-..++..+.
T Consensus 305 DKTGTIT~GnR~A~~f~p~~g----------------------------------------------------------- 325 (681)
T COG2216 305 DKTGTITLGNRQASEFIPVPG----------------------------------------------------------- 325 (681)
T ss_pred cccCceeecchhhhheecCCC-----------------------------------------------------------
Confidence 999999987654443331110
Q ss_pred CCccccccccccCCCCCCChHHHHHHHHHHhhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEE
Q 002656 501 GFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFI 580 (896)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i 580 (896)
...+++..+..+++-. -+.|...++++.|++.|+....+..
T Consensus 326 --------------------v~~~~la~aa~lsSl~--------------DeTpEGrSIV~LA~~~~~~~~~~~~----- 366 (681)
T COG2216 326 --------------------VSEEELADAAQLASLA--------------DETPEGRSIVELAKKLGIELREDDL----- 366 (681)
T ss_pred --------------------CCHHHHHHHHHHhhhc--------------cCCCCcccHHHHHHHhccCCCcccc-----
Confidence 0112344444444222 2478999999999998865433110
Q ss_pred EecCCCCCCCceeEEEEeeeecCCCCCeeEEEEEEcCCCcEEEEEcccchhhhHhhhccccccHHHHHHHHHHHHhcCCe
Q 002656 581 RERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLR 660 (896)
Q Consensus 581 ~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r 660 (896)
. .--...||+.+.|+..+-.. ++ .-+-|||...|.......+...++.+....++-++.|-.
T Consensus 367 ------------~--~~~~fvpFtA~TRmSGvd~~--~~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGT 428 (681)
T COG2216 367 ------------Q--SHAEFVPFTAQTRMSGVDLP--GG--REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGT 428 (681)
T ss_pred ------------c--ccceeeecceecccccccCC--CC--ceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCC
Confidence 0 01245799988766655543 33 678899999999999877777889999999999999999
Q ss_pred EEEEEEEeCCHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHhhhcccEEEEeeeeccccCCChHHHHHHHHHcCCeEEEE
Q 002656 661 TLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVL 740 (896)
Q Consensus 661 ~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~aGIkv~ml 740 (896)
+|+++. |-.++|++.++|-+|+|.+|-+.+||++|||.+|+
T Consensus 429 PL~V~~---------------------------------------~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~ 469 (681)
T COG2216 429 PLVVVE---------------------------------------NGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMI 469 (681)
T ss_pred ceEEEE---------------------------------------CCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEE
Confidence 999993 66799999999999999999999999999999999
Q ss_pred cCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhh
Q 002656 741 TGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYA 820 (896)
Q Consensus 741 TGD~~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~ 820 (896)
||||+.||..||.+.|+..
T Consensus 470 TGDN~~TAa~IA~EAGVDd------------------------------------------------------------- 488 (681)
T COG2216 470 TGDNPLTAAAIAAEAGVDD------------------------------------------------------------- 488 (681)
T ss_pred eCCCHHHHHHHHHHhCchh-------------------------------------------------------------
Confidence 9999999999999999853
Q ss_pred cchhHHHHHHHHhhhcCceEEEeCCcccHHHHHHHHhccCCCEEEEEcCChhhHHHHHHCCccEEE-eCccc
Q 002656 821 LEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI-SGVEG 891 (896)
Q Consensus 821 l~~~~~~~~~~l~~~~~~vv~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~~L~~AdVGI~i-sg~eg 891 (896)
..++++|++|..+|+.-|. .|+.|+|+|||+||+|||.+||||++| +|+-+
T Consensus 489 -------------------fiAeatPEdK~~~I~~eQ~-~grlVAMtGDGTNDAPALAqAdVg~AMNsGTqA 540 (681)
T COG2216 489 -------------------FIAEATPEDKLALIRQEQA-EGRLVAMTGDGTNDAPALAQADVGVAMNSGTQA 540 (681)
T ss_pred -------------------hhhcCChHHHHHHHHHHHh-cCcEEEEcCCCCCcchhhhhcchhhhhccccHH
Confidence 5678999999999999998 899999999999999999999999999 55543
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=99.97 E-value=8.8e-31 Score=274.94 Aligned_cols=222 Identities=25% Similarity=0.361 Sum_probs=185.8
Q ss_pred hhhhhhHHHHHHHHHHHHHhcchhhhcc---ce-EEEEeCCCeEEEeecccCccCcEEEeccCCcCCceEEEEeecCCCc
Q 002656 109 LAIVVGVSMAKEALEDWRRFMQDKEVNA---RK-VSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDG 184 (896)
Q Consensus 109 l~~vl~i~~~~~~~~d~~r~k~~~~~n~---~~-~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~~lL~ss~~~G 184 (896)
++++++++.+.+.+.++++++..+.+++ .+ ++|+ |||++++++|++|+|||||+|++||.+|||++||+ +|
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~-r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~----~g 76 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVI-RDGRWQKIPSSELVPGDIIILKAGDIVPADGILLE----SG 76 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEE-ETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEE----SS
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEE-eccccccchHhhccceeeeecccccccccCcccee----cc
Confidence 4577788888899999999998877654 34 8899 89999999999999999999999999999999998 26
Q ss_pred eEEEEeccCCCCCcceeecccccCCCCCchhhhccceEEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeeccceeecC
Q 002656 185 ICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNT 264 (896)
Q Consensus 185 ~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt 264 (896)
.|+||||+||||+.|+.|.+. +++..|++++||.+. +
T Consensus 77 ~~~vd~s~ltGes~pv~k~~~------------------------------------------~~~~~~~i~~Gs~v~-~ 113 (230)
T PF00122_consen 77 SAYVDESALTGESEPVKKTPL------------------------------------------PLNPGNIIFAGSIVV-S 113 (230)
T ss_dssp EEEEECHHHHSBSSEEEESSS------------------------------------------CCCTTTEE-TTEEEE-E
T ss_pred ccccccccccccccccccccc------------------------------------------cccccchhhcccccc-c
Confidence 799999999999999999863 456789999999999 8
Q ss_pred CeEEEEEEEeccccceeeccC---CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCCc
Q 002656 265 AHVYGSVIFTGHDSKVMQNAT---TSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDV 341 (896)
Q Consensus 265 ~~~~g~Vi~tG~~Tk~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~ii~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~ 341 (896)
||++++|++||.+|++++..+ ..+.+++++++.++++..+++++.+++++++++++.++ .....|+
T Consensus 114 g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-------- 182 (230)
T PF00122_consen 114 GWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIIILAIAILVFIIWFFN---DSGISFF-------- 182 (230)
T ss_dssp EEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHHHHHHHHHHHHCHTG---STTCHCC--------
T ss_pred cccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcccccchhhhccceec---ccccccc--------
Confidence 999999999999997655444 55666799999999999999998888888887665543 1111332
Q ss_pred ccCCCCCchhHHHHHHHHHHHhccccccchhhhHHHHHHHHHHHHhhccccccCCCCCCceeeccccccc
Q 002656 342 YFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEE 411 (896)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~v~~~~~~e~ 411 (896)
..|..++.+++.++|++|+++++++...++.++ .++++++|+++++|.
T Consensus 183 ------------~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~----------~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 183 ------------KSFLFAISLLIVLIPCALPLALPLSLAIAARRL----------AKNGIIVKNLSALEA 230 (230)
T ss_dssp ------------HHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHH----------HHTTEEESSTTHHHH
T ss_pred ------------cccccccceeeeecccceeehHHHHHHHHHHHH----------HHCCEEEeCcccccC
Confidence 578888999999999999999999999999998 789999999999884
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.88 E-value=2e-22 Score=209.14 Aligned_cols=97 Identities=29% Similarity=0.506 Sum_probs=90.7
Q ss_pred ccEEEEeeeeccccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHH
Q 002656 706 DLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKD 785 (896)
Q Consensus 706 dl~llG~~~i~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 785 (896)
++.++|.+.+.|++|++++++|+.|+++||+++|+|||+..+|..+|+++||..
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-------------------------- 168 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-------------------------- 168 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS--------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc--------------------------
Confidence 688999999999999999999999999999999999999999999999999932
Q ss_pred HHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcchhHHHHHHHHhhhcCceEEEeC--CcccH--HHHHHHHhccCC
Q 002656 786 NILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRV--SPKQK--ALVTRLVKEGTG 861 (896)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vv~~r~--sP~qK--~~iV~~lk~~~g 861 (896)
..|++++ +|++| ..+++.++. .+
T Consensus 169 ----------------------------------------------------~~v~a~~~~kP~~k~~~~~i~~l~~-~~ 195 (215)
T PF00702_consen 169 ----------------------------------------------------SIVFARVIGKPEPKIFLRIIKELQV-KP 195 (215)
T ss_dssp ----------------------------------------------------EEEEESHETTTHHHHHHHHHHHHTC-TG
T ss_pred ----------------------------------------------------ccccccccccccchhHHHHHHHHhc-CC
Confidence 2389999 99999 999999995 56
Q ss_pred CEEEEEcCChhhHHHHHHCC
Q 002656 862 KTTLAIGDGANDVGMIQEAD 881 (896)
Q Consensus 862 ~~vl~iGDG~ND~~~L~~Ad 881 (896)
..|+|||||.||++|+++||
T Consensus 196 ~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 196 GEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp GGEEEEESSGGHHHHHHHSS
T ss_pred CEEEEEccCHHHHHHHHhCc
Confidence 69999999999999999997
No 36
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.48 E-value=3.2e-14 Score=124.87 Aligned_cols=90 Identities=36% Similarity=0.591 Sum_probs=70.9
Q ss_pred hhcceeeecccCCCCceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEeeeecCCCCCeeE
Q 002656 531 AICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRM 610 (896)
Q Consensus 531 a~C~~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrm 610 (896)
++||++....+++....+ ..++|+|.||+.|+...|..+.. +.....|++++.+||||+||||
T Consensus 1 ~LCn~a~~~~~~~~~~~~-~~G~ptE~ALl~~~~~~g~~~~~----------------~~~~~~~~~~~~~pF~S~rK~m 63 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEE-IIGDPTEKALLRFAKKLGVGIDI----------------KEIRSKYKIVAEIPFDSERKRM 63 (91)
T ss_pred CCccccEeecCCCCcccc-ccCCcCHHHHHHHHHHcCCCCcH----------------HHHHhhcceeEEEccCccccee
Confidence 589999876555433322 57899999999999999654321 1135789999999999999999
Q ss_pred EEEEEcCCCcEEEEEcccchhhhHhhhc
Q 002656 611 SVIVRDEDGQILLLCKGADSIIFDRLSK 638 (896)
Q Consensus 611 sviv~~~~~~~~l~~KGa~~~i~~~~~~ 638 (896)
+||++ .++.+++|+|||||.|+++|+.
T Consensus 64 svv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 64 SVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred EEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 99999 3346788999999999999974
No 37
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.44 E-value=5.4e-13 Score=118.60 Aligned_cols=107 Identities=24% Similarity=0.380 Sum_probs=95.7
Q ss_pred ccEEEEeeeeccccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHH
Q 002656 706 DLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKD 785 (896)
Q Consensus 706 dl~llG~~~i~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 785 (896)
-+...+.++---+|=++++++|++|++. ++|++.|||..-+....|.-.|+-..
T Consensus 18 ~~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~------------------------- 71 (152)
T COG4087 18 AGKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE------------------------- 71 (152)
T ss_pred cceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee-------------------------
Confidence 3567888888899999999999999999 99999999999999999988885421
Q ss_pred HHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcchhHHHHHHHHhhhcCceEEEeCCcccHHHHHHHHhccCCCEEE
Q 002656 786 NILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTL 865 (896)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vv~~r~sP~qK~~iV~~lk~~~g~~vl 865 (896)
.|++...|+.|+.+++.|++ ++++|.
T Consensus 72 -----------------------------------------------------rv~a~a~~e~K~~ii~eLkk-~~~k~v 97 (152)
T COG4087 72 -----------------------------------------------------RVFAGADPEMKAKIIRELKK-RYEKVV 97 (152)
T ss_pred -----------------------------------------------------eeecccCHHHHHHHHHHhcC-CCcEEE
Confidence 18999999999999999998 899999
Q ss_pred EEcCChhhHHHHHHCCccEEEeCcccc
Q 002656 866 AIGDGANDVGMIQEADIGIGISGVEGM 892 (896)
Q Consensus 866 ~iGDG~ND~~~L~~AdVGI~isg~eg~ 892 (896)
|+|||+||.+||+.||+||-.-+.|+.
T Consensus 98 mVGnGaND~laLr~ADlGI~tiq~e~v 124 (152)
T COG4087 98 MVGNGANDILALREADLGICTIQQEGV 124 (152)
T ss_pred EecCCcchHHHhhhcccceEEeccCCc
Confidence 999999999999999999976666653
No 38
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.74 E-value=5.3e-08 Score=99.41 Aligned_cols=110 Identities=19% Similarity=0.128 Sum_probs=84.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhhhhh
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (896)
++.|++.++|+.|++.| ++.|+||-....+..++..+|+-.--.+.+.++...
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g-------------------------- 120 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 120 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCC--------------------------
Confidence 57999999999999975 999999999999999999999853111111111000
Q ss_pred hhccCCCCCceEEEEeCchhhhhcchhHHHHHHHHhhhcCceEEEeCCcccHHHHHHHHhccCCCEEEEEcCChhhHHHH
Q 002656 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (896)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vv~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~~L 877 (896)
.++|. .. ..|..|..+++.+++ .+..+.++|||.||.+|+
T Consensus 121 -------------~~tG~------------------------~~--~~~~~K~~~l~~l~~-~~~~~v~vGDs~nDl~ml 160 (203)
T TIGR02137 121 -------------RVVGY------------------------QL--RQKDPKRQSVIAFKS-LYYRVIAAGDSYNDTTML 160 (203)
T ss_pred -------------eeECe------------------------ee--cCcchHHHHHHHHHh-hCCCEEEEeCCHHHHHHH
Confidence 12221 11 357789999999986 677899999999999999
Q ss_pred HHCCccEEEeCcccccc
Q 002656 878 QEADIGIGISGVEGMQV 894 (896)
Q Consensus 878 ~~AdVGI~isg~eg~qa 894 (896)
+.|++||++.+++.-++
T Consensus 161 ~~Ag~~ia~~ak~~~~~ 177 (203)
T TIGR02137 161 SEAHAGILFHAPENVIR 177 (203)
T ss_pred HhCCCCEEecCCHHHHH
Confidence 99999999998886554
No 39
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.70 E-value=1e-07 Score=97.72 Aligned_cols=112 Identities=22% Similarity=0.240 Sum_probs=86.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhhhh
Q 002656 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (896)
Q Consensus 717 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (896)
.++.+++.+.++.++++|.+||++||=-..-+..+|+.+|+...-.+.+.+...
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG-------------------------- 129 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG-------------------------- 129 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC--------------------------
Confidence 789999999999999999999999999999999999999997644333332210
Q ss_pred hhhccCCCCCceEEEEeCchhhhhcchhHHHHHHHHhhhcCceEEEeCCcccHHHHHHHHhccCCC---EEEEEcCChhh
Q 002656 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGK---TTLAIGDGAND 873 (896)
Q Consensus 797 ~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vv~~r~sP~qK~~iV~~lk~~~g~---~vl~iGDG~ND 873 (896)
+++|. ++.-.+..+.|...++.+.+..|. -+.++|||.||
T Consensus 130 --------------~ltG~-----------------------v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nD 172 (212)
T COG0560 130 --------------KLTGR-----------------------VVGPICDGEGKAKALRELAAELGIPLEETVAYGDSAND 172 (212)
T ss_pred --------------EEece-----------------------eeeeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhh
Confidence 23332 133334557898888666543454 49999999999
Q ss_pred HHHHHHCCccEEEeCccc
Q 002656 874 VGMIQEADIGIGISGVEG 891 (896)
Q Consensus 874 ~~~L~~AdVGI~isg~eg 891 (896)
.|||+.|+.+|++..+..
T Consensus 173 lpml~~ag~~ia~n~~~~ 190 (212)
T COG0560 173 LPMLEAAGLPIAVNPKPK 190 (212)
T ss_pred HHHHHhCCCCeEeCcCHH
Confidence 999999999999976653
No 40
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.46 E-value=7.5e-07 Score=97.22 Aligned_cols=110 Identities=27% Similarity=0.280 Sum_probs=78.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhhhhh
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (896)
++.||+.++|+.|++.|+++.++||.....+..+..++|+..--.+.+.+...
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg--------------------------- 233 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDG--------------------------- 233 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECC---------------------------
Confidence 58899999999999999999999999888888888888874311111111100
Q ss_pred hhccCCCCCceEEEEeCchhhhhcchhHHHHHHHHhhhcCceEEEeCCcccHHHHHHHHhccCC---CEEEEEcCChhhH
Q 002656 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTG---KTTLAIGDGANDV 874 (896)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vv~~r~sP~qK~~iV~~lk~~~g---~~vl~iGDG~ND~ 874 (896)
.++|..... + +..+.|...++.+.+..| ..|+|||||.||.
T Consensus 234 -------------~ltg~v~g~--------------------i---v~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl 277 (322)
T PRK11133 234 -------------KLTGNVLGD--------------------I---VDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDL 277 (322)
T ss_pred -------------EEEeEecCc--------------------c---CCcccHHHHHHHHHHHcCCChhhEEEEECCHHHH
Confidence 112211100 1 234678888888765434 5799999999999
Q ss_pred HHHHHCCccEEEeCcc
Q 002656 875 GMIQEADIGIGISGVE 890 (896)
Q Consensus 875 ~~L~~AdVGI~isg~e 890 (896)
+|++.|++||++..++
T Consensus 278 ~m~~~AGlgiA~nAkp 293 (322)
T PRK11133 278 PMIKAAGLGIAYHAKP 293 (322)
T ss_pred HHHHHCCCeEEeCCCH
Confidence 9999999999996554
No 41
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.31 E-value=3e-06 Score=86.02 Aligned_cols=92 Identities=21% Similarity=0.261 Sum_probs=70.0
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhhhhhhhc
Q 002656 721 KGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKL 800 (896)
Q Consensus 721 ~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (896)
+++++.|+.++++|++++|+||+....+..+|+.+|+.....-...+. ..
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~-~~----------------------------- 141 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELF-DN----------------------------- 141 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEE-CT-----------------------------
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeee-ec-----------------------------
Confidence 667799999999999999999999999999999999875321111110 00
Q ss_pred cCCCCCceEEEEeCchhhhhcchhHHHHHHHHhhhcCceEEEeCCcc-c--HHHHHHHH------hccCCCEEEEEcCCh
Q 002656 801 ERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPK-Q--KALVTRLV------KEGTGKTTLAIGDGA 871 (896)
Q Consensus 801 ~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vv~~r~sP~-q--K~~iV~~l------k~~~g~~vl~iGDG~ 871 (896)
+ ......|++|. + |...++.+ +. ....++++|||.
T Consensus 142 -------------~----------------------~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~-~~~~~~~iGDs~ 185 (192)
T PF12710_consen 142 -------------G----------------------GGIFTGRITGSNCGGKAEALKELYIRDEEDI-DPDRVIAIGDSI 185 (192)
T ss_dssp -------------T----------------------CCEEEEEEEEEEESHHHHHHHHHHHHHHHTH-TCCEEEEEESSG
T ss_pred -------------c----------------------cceeeeeECCCCCCcHHHHHHHHHHHhhcCC-CCCeEEEEECCH
Confidence 0 12256666666 5 99999999 33 578999999999
Q ss_pred hhHHHHH
Q 002656 872 NDVGMIQ 878 (896)
Q Consensus 872 ND~~~L~ 878 (896)
||.+|||
T Consensus 186 ~D~~~lr 192 (192)
T PF12710_consen 186 NDLPMLR 192 (192)
T ss_dssp GGHHHHH
T ss_pred HHHHHhC
Confidence 9999997
No 42
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.17 E-value=8.7e-06 Score=87.33 Aligned_cols=49 Identities=18% Similarity=0.281 Sum_probs=42.9
Q ss_pred Eeeeeccc-cCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002656 711 GATAVEDK-LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (896)
Q Consensus 711 G~~~i~D~-lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~ 759 (896)
|.+.-.+. +.+.+.++|+++++.|+++.++||.....+..+..++++-.
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~ 61 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG 61 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc
Confidence 44555554 88999999999999999999999999999999999999864
No 43
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.16 E-value=4.3e-06 Score=80.57 Aligned_cols=111 Identities=22% Similarity=0.366 Sum_probs=77.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCc--eEEEEecCCchhhHHHHHHHHHHHHHHHHHhhh
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGM--KQICITALNSDSVGKAAKEAVKDNILMQITNAS 795 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (896)
.+-+|++|.+..|++.|.+|.++||--..-+..||.++||-..+. +.+.++.
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~-------------------------- 141 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDK-------------------------- 141 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeecc--------------------------
Confidence 457999999999999999999999999999999999999965321 1111110
Q ss_pred hhhhccCCCCCceEEEEeCchhhhhcchhHHHHHHHHhhhcCceEEEeCCcccHHHHHHHHhcc-CCCEEEEEcCChhhH
Q 002656 796 QMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG-TGKTTLAIGDGANDV 874 (896)
Q Consensus 796 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vv~~r~sP~qK~~iV~~lk~~-~g~~vl~iGDG~ND~ 874 (896)
+|+-+..-. --.=+...-|+.+++.+++. ..+.++|||||+||.
T Consensus 142 -----------------~Gk~~gfd~------------------~~ptsdsggKa~~i~~lrk~~~~~~~~mvGDGatDl 186 (227)
T KOG1615|consen 142 -----------------DGKYLGFDT------------------NEPTSDSGGKAEVIALLRKNYNYKTIVMVGDGATDL 186 (227)
T ss_pred -----------------CCccccccc------------------CCccccCCccHHHHHHHHhCCChheeEEecCCcccc
Confidence 111110000 00002234699999999874 345899999999999
Q ss_pred HHHHHCCccEEEeCc
Q 002656 875 GMIQEADIGIGISGV 889 (896)
Q Consensus 875 ~~L~~AdVGI~isg~ 889 (896)
+|+..||.=||..|.
T Consensus 187 ea~~pa~afi~~~g~ 201 (227)
T KOG1615|consen 187 EAMPPADAFIGFGGN 201 (227)
T ss_pred ccCCchhhhhccCCc
Confidence 999997766665444
No 44
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.16 E-value=7.5e-06 Score=85.51 Aligned_cols=172 Identities=17% Similarity=0.193 Sum_probs=87.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecC------Cchhh-HHHHHH-HHHHHHHH
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITAL------NSDSV-GKAAKE-AVKDNILM 789 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~~~~~~~~i~~~------~~~~~-~~~~~~-~~~~~~~~ 789 (896)
.+.+.+.++|++|++.||+++++||.....+..+++.+|+.. ..+..++. ..+.. ...... ........
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPD---PVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIA 91 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC---eEEEecCcEEEeCCCCceEEecccCHHHHHHHHHh
Confidence 467888899999999999999999999999999999988422 22222221 00000 000000 00000000
Q ss_pred HHHhhhhhhhccCCCCCceEEEEeCchhhhhcchhHHHHHHHHhhhcCceEEEeCCc--ccHHHHHHHHhccCC---CEE
Q 002656 790 QITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSP--KQKALVTRLVKEGTG---KTT 864 (896)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vv~~r~sP--~qK~~iV~~lk~~~g---~~v 864 (896)
....................+......+.+ .++..++......+....+..+.| ..|..-++.+.+..| ..|
T Consensus 92 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~ 168 (225)
T TIGR01482 92 -KTFPFSRLKVQYPRRASLVKMRYGIDVDTV--REIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGET 168 (225)
T ss_pred -cccchhhhccccccccceEEEeecCCHHHH--HHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHE
Confidence 000000000000001111111111111110 011111110000001113445555 468888887765433 469
Q ss_pred EEEcCChhhHHHHHHCCccEEEeCc--cccccC
Q 002656 865 LAIGDGANDVGMIQEADIGIGISGV--EGMQVG 895 (896)
Q Consensus 865 l~iGDG~ND~~~L~~AdVGI~isg~--eg~qaa 895 (896)
+++||+.||.+|++.|++|++|... +..++|
T Consensus 169 i~~GD~~NDi~m~~~ag~~vam~Na~~~~k~~A 201 (225)
T TIGR01482 169 LVCGDSENDIDLFEVPGFGVAVANAQPELKEWA 201 (225)
T ss_pred EEECCCHhhHHHHHhcCceEEcCChhHHHHHhc
Confidence 9999999999999999999999544 344444
No 45
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.12 E-value=1.2e-05 Score=83.64 Aligned_cols=111 Identities=23% Similarity=0.315 Sum_probs=77.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhhhhh
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (896)
++.++++++|+.|++.|+++.|+||.....+..+...+|+..--...+..+..
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~--------------------------- 137 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDG--------------------------- 137 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECC---------------------------
Confidence 68999999999999999999999999999999999999885311111111100
Q ss_pred hhccCCCCCceEEEEeCchhhhhcchhHHHHHHHHhhhcCceEEEe-CCcccHHHHHHHHhccCC---CEEEEEcCChhh
Q 002656 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCR-VSPKQKALVTRLVKEGTG---KTTLAIGDGAND 873 (896)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vv~~r-~sP~qK~~iV~~lk~~~g---~~vl~iGDG~ND 873 (896)
+++|. +.++ ..+..|..+++.+.+..+ ..+++|||+.+|
T Consensus 138 -------------~~~~~------------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D 180 (219)
T TIGR00338 138 -------------KLTGL------------------------VEGPIVDASYKGKTLLILLRKEGISPENTVAVGDGAND 180 (219)
T ss_pred -------------EEEEE------------------------ecCcccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHH
Confidence 01110 1111 223346677765544222 358899999999
Q ss_pred HHHHHHCCccEEEeCcccc
Q 002656 874 VGMIQEADIGIGISGVEGM 892 (896)
Q Consensus 874 ~~~L~~AdVGI~isg~eg~ 892 (896)
+.|++.|++++++.+.+..
T Consensus 181 i~aa~~ag~~i~~~~~~~~ 199 (219)
T TIGR00338 181 LSMIKAAGLGIAFNAKPKL 199 (219)
T ss_pred HHHHHhCCCeEEeCCCHHH
Confidence 9999999999999777633
No 46
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.12 E-value=9.2e-06 Score=85.16 Aligned_cols=172 Identities=15% Similarity=0.168 Sum_probs=88.8
Q ss_pred Eeeeeccc-cCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc----cCceEEEEecCCchhhHHHHHHHHHH
Q 002656 711 GATAVEDK-LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR----QGMKQICITALNSDSVGKAAKEAVKD 785 (896)
Q Consensus 711 G~~~i~D~-lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~----~~~~~~~i~~~~~~~~~~~~~~~~~~ 785 (896)
|.+.-.|+ +-+.+.++|++|++.|++++++||.....+..+++.+++-. .+...+.............. ....
T Consensus 12 GTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~-~~~~- 89 (230)
T PRK01158 12 GTITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDI-EECE- 89 (230)
T ss_pred CCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcch-HHHH-
Confidence 33333444 67889999999999999999999999999999999888632 11122221111110000000 0000
Q ss_pred HHHHHHHhhhh----hhhccCCCCCceEEEE-eCchhhhhcchhHHHHHHHHhhhc---CceEEEeCCccc--HHHHHHH
Q 002656 786 NILMQITNASQ----MIKLERDPHAAYALII-EGKTLAYALEDDMKHHFLGLAVEC---ASVICCRVSPKQ--KALVTRL 855 (896)
Q Consensus 786 ~~~~~~~~~~~----~~~~~~~~~~~~~lvi-~G~~l~~~l~~~~~~~~~~l~~~~---~~vv~~r~sP~q--K~~iV~~ 855 (896)
.+...+..... .............+.+ +.... ++....+....... .+..+..+.|.. |..-++.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~ 164 (230)
T PRK01158 90 KAYSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPV-----EEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKK 164 (230)
T ss_pred HHHHHHHHhccccceeeecCCcccccceeeecccccH-----HHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHH
Confidence 01111110000 0000000000011111 11111 11222221111000 111244666665 8888888
Q ss_pred HhccCC---CEEEEEcCChhhHHHHHHCCccEEEeCc
Q 002656 856 VKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGV 889 (896)
Q Consensus 856 lk~~~g---~~vl~iGDG~ND~~~L~~AdVGI~isg~ 889 (896)
+.+..| .-++++|||.||.+|++.|++|++|...
T Consensus 165 l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na 201 (230)
T PRK01158 165 LAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVANA 201 (230)
T ss_pred HHHHhCCCHHHEEEECCchhhHHHHHhcCceEEecCc
Confidence 865433 4699999999999999999999999543
No 47
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.04 E-value=3.4e-05 Score=79.87 Aligned_cols=112 Identities=13% Similarity=0.208 Sum_probs=74.9
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhhhh
Q 002656 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (896)
Q Consensus 717 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (896)
-+++||+.+.++.|++.|+++.|+||.....+..+....+... .++ -+.
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~---~i~-~n~--------------------------- 117 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKD---RIY-CNE--------------------------- 117 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcc---cEE-ece---------------------------
Confidence 4799999999999999999999999999888888887664321 111 000
Q ss_pred hhhccCCCCCceEEEEeCchhhhhcchhHHHHHHHHhhhcCceEEEeCCcccHHHHHHHHhccCCCEEEEEcCChhhHHH
Q 002656 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGM 876 (896)
Q Consensus 797 ~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vv~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~~ 876 (896)
++++|+.+..... . .|. .-+.......|..+++.++. .+..++|||||.||..|
T Consensus 118 -------------~~~~~~~~~~~~p-~----------~~~-~~~~~~cg~~K~~~l~~~~~-~~~~~i~iGDg~~D~~~ 171 (214)
T TIGR03333 118 -------------ADFSNEYIHIDWP-H----------PCD-GTCQNQCGCCKPSLIRKLSE-PNDYHIVIGDSVTDVEA 171 (214)
T ss_pred -------------eEeeCCeeEEeCC-C----------CCc-cccccCCCCCHHHHHHHHhh-cCCcEEEEeCCHHHHHH
Confidence 1122222111000 0 000 00011114579999998886 56778999999999999
Q ss_pred HHHCCccEE
Q 002656 877 IQEADIGIG 885 (896)
Q Consensus 877 L~~AdVGI~ 885 (896)
++.||++++
T Consensus 172 a~~Ad~~~a 180 (214)
T TIGR03333 172 AKQSDLCFA 180 (214)
T ss_pred HHhCCeeEe
Confidence 999999776
No 48
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.02 E-value=3.6e-05 Score=79.09 Aligned_cols=105 Identities=22% Similarity=0.227 Sum_probs=77.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhhhhh
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (896)
++.||+.++++.|+++ +++.++||-....+..+...+|+..--...+......
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------------------------- 120 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG-------------------------- 120 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC--------------------------
Confidence 4579999999999999 9999999999999999999998742111111111000
Q ss_pred hhccCCCCCceEEEEeCchhhhhcchhHHHHHHHHhhhcCceEEEe-CCcccHHHHHHHHhccCCCEEEEEcCChhhHHH
Q 002656 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCR-VSPKQKALVTRLVKEGTGKTTLAIGDGANDVGM 876 (896)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vv~~r-~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~~ 876 (896)
.+.| .. ..|..|..+++.++. .+..++|||||.||.+|
T Consensus 121 -------------~i~~---------------------------~~~~~p~~k~~~l~~~~~-~~~~~v~iGDs~~D~~~ 159 (205)
T PRK13582 121 -------------MITG---------------------------YDLRQPDGKRQAVKALKS-LGYRVIAAGDSYNDTTM 159 (205)
T ss_pred -------------eEEC---------------------------ccccccchHHHHHHHHHH-hCCeEEEEeCCHHHHHH
Confidence 0111 11 246778888888876 67889999999999999
Q ss_pred HHHCCccEEEeCcc
Q 002656 877 IQEADIGIGISGVE 890 (896)
Q Consensus 877 L~~AdVGI~isg~e 890 (896)
.+.|++|+.....+
T Consensus 160 ~~aa~~~v~~~~~~ 173 (205)
T PRK13582 160 LGEADAGILFRPPA 173 (205)
T ss_pred HHhCCCCEEECCCH
Confidence 99999999875443
No 49
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.02 E-value=2e-05 Score=76.89 Aligned_cols=33 Identities=15% Similarity=0.196 Sum_probs=31.0
Q ss_pred HHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 726 CIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 726 ~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
+|+.|++.|+++.|+||+....+..++...|+-
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~ 68 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGIT 68 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999988874
No 50
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.01 E-value=1.8e-05 Score=85.12 Aligned_cols=41 Identities=15% Similarity=0.125 Sum_probs=38.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
.+-+.+.++|++|+++|+++++.||.....+..+..++++.
T Consensus 20 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 60 (270)
T PRK10513 20 TISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHME 60 (270)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCC
Confidence 57788999999999999999999999999999999999864
No 51
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=97.98 E-value=4.3e-05 Score=81.50 Aligned_cols=40 Identities=10% Similarity=0.072 Sum_probs=36.1
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 719 lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
.-+.+.++|+.|++.|+++.++||.....+..+.+++|+.
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE 56 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 4456899999999999999999999999999999999863
No 52
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=97.96 E-value=3.6e-05 Score=79.82 Aligned_cols=170 Identities=15% Similarity=0.188 Sum_probs=87.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccccc----CceEEEEecCCchhhHHHHHHHHHHHHHHHHHh
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQ----GMKQICITALNSDSVGKAAKEAVKDNILMQITN 793 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (896)
++-+.+.++|++|++.|+++.++||.....+..+++.+++-.. +...+........ ............... ...
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~-~~~~~~~~~~~~~~~-~~~ 95 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIF-LANMEEEWFLDEEKK-KRF 95 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEE-EecccchhhHHHhhh-hhh
Confidence 4788999999999999999999999999999999998886421 1112221111000 000000000000000 000
Q ss_pred hhhhhhccCCCCCceEEEEeCchhhhhcchhHHHHHHHHhhhc-CceEEEeCCc--ccHHHHHHHHhccCC---CEEEEE
Q 002656 794 ASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVEC-ASVICCRVSP--KQKALVTRLVKEGTG---KTTLAI 867 (896)
Q Consensus 794 ~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~-~~vv~~r~sP--~qK~~iV~~lk~~~g---~~vl~i 867 (896)
....... ........+..+++... .+...+....... .+..+..++| ..|+..++.+.+..| ..++++
T Consensus 96 ~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~i 169 (215)
T TIGR01487 96 PRDRLSN-EYPRASLVIMREGKDVD-----EVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAI 169 (215)
T ss_pred hhhhccc-ccceeEEEEecCCccHH-----HHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEE
Confidence 0000000 00011112222322221 1111111110000 0002334444 579999998876433 359999
Q ss_pred cCChhhHHHHHHCCccEEEeCc--cccccC
Q 002656 868 GDGANDVGMIQEADIGIGISGV--EGMQVG 895 (896)
Q Consensus 868 GDG~ND~~~L~~AdVGI~isg~--eg~qaa 895 (896)
||+.||.+|++.|++|++|... +..++|
T Consensus 170 GDs~ND~~ml~~ag~~vam~na~~~~k~~A 199 (215)
T TIGR01487 170 GDSENDIDLFRVVGFKVAVANADDQLKEIA 199 (215)
T ss_pred CCCHHHHHHHHhCCCeEEcCCccHHHHHhC
Confidence 9999999999999999999433 344444
No 53
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=97.96 E-value=2.2e-05 Score=84.53 Aligned_cols=41 Identities=20% Similarity=0.134 Sum_probs=38.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
.+-+.+.++|++|++.|+++.+.||.....+..+..++++-
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 59 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLD 59 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCC
Confidence 58889999999999999999999999999999999998863
No 54
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=97.94 E-value=5.7e-05 Score=77.25 Aligned_cols=108 Identities=22% Similarity=0.224 Sum_probs=75.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhhhhh
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (896)
++.+++.++|+.|++.|+++.++||-....+..++...|+..--...+..+...
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g-------------------------- 133 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKG-------------------------- 133 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCC--------------------------
Confidence 589999999999999999999999999999999999998632111111111000
Q ss_pred hhccCCCCCceEEEEeCchhhhhcchhHHHHHHHHhhhcCceEEEeCCcccHHHHHHHHhccC---CCEEEEEcCChhhH
Q 002656 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGT---GKTTLAIGDGANDV 874 (896)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vv~~r~sP~qK~~iV~~lk~~~---g~~vl~iGDG~ND~ 874 (896)
...+ ..+-.+.|..|..+++.+.+.. ...+++|||+.+|+
T Consensus 134 -------------~~~p------------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~ 176 (201)
T TIGR01491 134 -------------FIQP------------------------DGIVRVTFDNKGEAVERLKRELNPSLTETVAVGDSKNDL 176 (201)
T ss_pred -------------eEec------------------------ceeeEEccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHH
Confidence 0000 0122244667877777664422 34599999999999
Q ss_pred HHHHHCCccEEEeC
Q 002656 875 GMIQEADIGIGISG 888 (896)
Q Consensus 875 ~~L~~AdVGI~isg 888 (896)
+|++.|++++++.+
T Consensus 177 ~~a~~ag~~~a~~~ 190 (201)
T TIGR01491 177 PMFEVADISISLGD 190 (201)
T ss_pred HHHHhcCCeEEECC
Confidence 99999999999843
No 55
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=97.91 E-value=4.2e-05 Score=76.51 Aligned_cols=101 Identities=18% Similarity=0.191 Sum_probs=70.2
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhhhhhh
Q 002656 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMI 798 (896)
Q Consensus 719 lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (896)
+++++.+.++.|++.|++++++||.....+..++...|+-.--...+..+...
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g--------------------------- 126 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNG--------------------------- 126 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCC---------------------------
Confidence 57999999999999999999999999999999999988752111111111000
Q ss_pred hccCCCCCceEEEEeCchhhhhcchhHHHHHHHHhhhcCceEEEeCCcccHHHHHHHHhccC---CCEEEEEcCChhhHH
Q 002656 799 KLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGT---GKTTLAIGDGANDVG 875 (896)
Q Consensus 799 ~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vv~~r~sP~qK~~iV~~lk~~~---g~~vl~iGDG~ND~~ 875 (896)
.++|+... + -...+..|..+++.+.+.. ...++++|||.||.+
T Consensus 127 ------------~~~g~~~~------------------~----~~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~ 172 (177)
T TIGR01488 127 ------------LLTGPIEG------------------Q----VNPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLP 172 (177)
T ss_pred ------------EEeCccCC------------------c----ccCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHH
Confidence 11221000 0 1245678998888876532 346899999999999
Q ss_pred HHHHC
Q 002656 876 MIQEA 880 (896)
Q Consensus 876 ~L~~A 880 (896)
|++.|
T Consensus 173 ~~~~a 177 (177)
T TIGR01488 173 MLKLA 177 (177)
T ss_pred HHhcC
Confidence 99876
No 56
>PRK10976 putative hydrolase; Provisional
Probab=97.89 E-value=3.9e-05 Score=82.34 Aligned_cols=41 Identities=15% Similarity=0.106 Sum_probs=37.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
.+-+.+.++|++|+++|+++.+.||.....+..+...+++-
T Consensus 19 ~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 59 (266)
T PRK10976 19 TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIK 59 (266)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCC
Confidence 47788999999999999999999999999999999998863
No 57
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.88 E-value=4.7e-05 Score=76.87 Aligned_cols=114 Identities=16% Similarity=0.167 Sum_probs=75.5
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhhhh
Q 002656 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (896)
Q Consensus 717 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (896)
-++.+++.++++.|++.|+++.++|+.....+..+....|+..--.. +.-+..
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~-i~~~~~-------------------------- 123 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIE-IYSNPA-------------------------- 123 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeE-EeccCc--------------------------
Confidence 48899999999999999999999999999999998888887432111 111100
Q ss_pred hhhccCCCCCceEEEEeCchhhhhcchhHHHHHHHHhhhcCceEEEe-CCcccHHHHHHHHhccC-CCEEEEEcCChhhH
Q 002656 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCR-VSPKQKALVTRLVKEGT-GKTTLAIGDGANDV 874 (896)
Q Consensus 797 ~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vv~~r-~sP~qK~~iV~~lk~~~-g~~vl~iGDG~ND~ 874 (896)
+.+++-...... ..|. .|.. .....|..+++.++. . ...+++||||.||+
T Consensus 124 --------------~~~~~g~~~~~~-----------~~~~--~~~~~~~g~~K~~~~~~~~~-~~~~~~i~iGD~~~D~ 175 (188)
T TIGR01489 124 --------------SFDNDGRHIVWP-----------HHCH--GCCSCPCGCCKGKVIHKLSE-PKYQHIIYIGDGVTDV 175 (188)
T ss_pred --------------eECCCCcEEEec-----------CCCC--ccCcCCCCCCHHHHHHHHHh-hcCceEEEECCCcchh
Confidence 000000000000 0000 1111 122469999999887 5 77899999999999
Q ss_pred HHHHHCCccEE
Q 002656 875 GMIQEADIGIG 885 (896)
Q Consensus 875 ~~L~~AdVGI~ 885 (896)
.|.+.||+-.+
T Consensus 176 ~aa~~~d~~~a 186 (188)
T TIGR01489 176 CPAKLSDVVFA 186 (188)
T ss_pred chHhcCCcccc
Confidence 99999987654
No 58
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.87 E-value=0.00039 Score=74.85 Aligned_cols=39 Identities=8% Similarity=0.112 Sum_probs=35.7
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccc
Q 002656 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (896)
Q Consensus 719 lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi 757 (896)
+-+.+.++|++|+++||++++.||.....+..++.++|+
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~ 63 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGL 63 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCC
Confidence 346688999999999999999999999999999999987
No 59
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=97.84 E-value=4.1e-05 Score=75.47 Aligned_cols=34 Identities=12% Similarity=0.100 Sum_probs=32.1
Q ss_pred HHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 725 QCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 725 e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
..|..|+++|+++.|+|+.....+..+...+|+.
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~ 74 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIK 74 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCc
Confidence 5899999999999999999999999999999985
No 60
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=97.81 E-value=2.3e-05 Score=82.96 Aligned_cols=42 Identities=14% Similarity=0.235 Sum_probs=38.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 717 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
..+-+.+.++|++|+++|+++.+.||.....+..+..+.++-
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~ 55 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID 55 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccch
Confidence 346688999999999999999999999999999999988865
No 61
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=97.81 E-value=8.1e-05 Score=76.29 Aligned_cols=113 Identities=12% Similarity=0.023 Sum_probs=78.7
Q ss_pred eccccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhh
Q 002656 715 VEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNA 794 (896)
Q Consensus 715 i~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (896)
+..++++++.+.|+.+++.|++++++||-....+..+++.+|+..--...+......
T Consensus 84 ~~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g----------------------- 140 (202)
T TIGR01490 84 IESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDG----------------------- 140 (202)
T ss_pred HHHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCC-----------------------
Confidence 356789999999999999999999999999999999999999842100001100000
Q ss_pred hhhhhccCCCCCceEEEEeCchhhhhcchhHHHHHHHHhhhcCceEEEeCCcccHHHHHHHHhccCC---CEEEEEcCCh
Q 002656 795 SQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTG---KTTLAIGDGA 871 (896)
Q Consensus 795 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vv~~r~sP~qK~~iV~~lk~~~g---~~vl~iGDG~ 871 (896)
+.+|+... -.+.++.|...++.+.+..+ ..++++||+.
T Consensus 141 ----------------~~~g~~~~-----------------------~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~ 181 (202)
T TIGR01490 141 ----------------IYTGNIDG-----------------------NNCKGEGKVHALAELLAEEQIDLKDSYAYGDSI 181 (202)
T ss_pred ----------------EEeCCccC-----------------------CCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCc
Confidence 12232110 12346778877766543233 3689999999
Q ss_pred hhHHHHHHCCccEEEeCc
Q 002656 872 NDVGMIQEADIGIGISGV 889 (896)
Q Consensus 872 ND~~~L~~AdVGI~isg~ 889 (896)
+|.+|++.|+.++.+...
T Consensus 182 ~D~~~~~~a~~~~~v~~~ 199 (202)
T TIGR01490 182 SDLPLLSLVGHPYVVNPD 199 (202)
T ss_pred ccHHHHHhCCCcEEeCCC
Confidence 999999999999988654
No 62
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.75 E-value=0.00021 Score=74.20 Aligned_cols=110 Identities=14% Similarity=0.209 Sum_probs=72.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhhhhh
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (896)
+++||+.++++.|++.|+++.|+||-....+..+.... +.. ..++...
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~--~~i~~n~----------------------------- 121 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK--EQIYCNG----------------------------- 121 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc--CcEEEeE-----------------------------
Confidence 68999999999999999999999999998888888877 432 1111100
Q ss_pred hhccCCCCCceEEEEeCchhhhhcchhHHHHHHHHhhhcCceEEE-eCCcccHHHHHHHHhccCCCEEEEEcCChhhHHH
Q 002656 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICC-RVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGM 876 (896)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vv~~-r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~~ 876 (896)
...+|+.+...... .....| ......|..+++.++. ....++|||||.||..|
T Consensus 122 ------------~~~~~~~~~~~kp~-------------p~~~~~~~~~~~~K~~~l~~~~~-~~~~~i~iGDs~~Di~a 175 (219)
T PRK09552 122 ------------SDFSGEYITITWPH-------------PCDEHCQNHCGCCKPSLIRKLSD-TNDFHIVIGDSITDLEA 175 (219)
T ss_pred ------------EEecCCeeEEeccC-------------CccccccccCCCchHHHHHHhcc-CCCCEEEEeCCHHHHHH
Confidence 01122111100000 000000 0012348888888876 55679999999999999
Q ss_pred HHHCCccEE
Q 002656 877 IQEADIGIG 885 (896)
Q Consensus 877 L~~AdVGI~ 885 (896)
.+.||+.++
T Consensus 176 a~~Ag~~~a 184 (219)
T PRK09552 176 AKQADKVFA 184 (219)
T ss_pred HHHCCccee
Confidence 999999776
No 63
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=97.71 E-value=0.00029 Score=73.37 Aligned_cols=43 Identities=7% Similarity=0.027 Sum_probs=38.2
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 716 ~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
.+..-+++.++|++|+++|++++++||.....+..+..++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4556667999999999999999999999999999999999963
No 64
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.68 E-value=0.00013 Score=68.80 Aligned_cols=117 Identities=16% Similarity=0.182 Sum_probs=76.3
Q ss_pred eccccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhh
Q 002656 715 VEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNA 794 (896)
Q Consensus 715 i~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (896)
-..++.++++++++.|++.|++++++||.....+...+..+|+.......+........
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------------------- 79 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIY--------------------- 79 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhh---------------------
Confidence 34588999999999999999999999999999999999999874322111111100000
Q ss_pred hhhhhccCCCCCceEEEEeCchhhhhcchhHHHHHHHHhhhcCceEEEeCCcccHHHHHHHHhccCCCEEEEEcCChhhH
Q 002656 795 SQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDV 874 (896)
Q Consensus 795 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vv~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~ 874 (896)
....... .....+++++-.|..+..+.+.+.. ....++++||+.+|+
T Consensus 80 -----------~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~igD~~~d~ 126 (139)
T cd01427 80 -----------YPKEGLF---------------------LGGGPFDIGKPNPDKLLAALKLLGV-DPEEVLMVGDSLNDI 126 (139)
T ss_pred -----------ccccccc---------------------ccccccccCCCCHHHHHHHHHHcCC-ChhhEEEeCCCHHHH
Confidence 0000000 0111224555566666666666654 467899999999999
Q ss_pred HHHHH-CCccEE
Q 002656 875 GMIQE-ADIGIG 885 (896)
Q Consensus 875 ~~L~~-AdVGI~ 885 (896)
.|++. +.-+|+
T Consensus 127 ~~~~~~g~~~i~ 138 (139)
T cd01427 127 EMAKAAGGLGVA 138 (139)
T ss_pred HHHHHcCCceee
Confidence 99998 444444
No 65
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=97.61 E-value=0.00017 Score=72.68 Aligned_cols=34 Identities=18% Similarity=0.199 Sum_probs=31.7
Q ss_pred HHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 725 QCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 725 e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
..|+.|++.|+++.++||.....+..+++++|+.
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~ 88 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGIT 88 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCc
Confidence 6899999999999999999999999999999874
No 66
>PLN02954 phosphoserine phosphatase
Probab=97.61 E-value=0.00028 Score=73.53 Aligned_cols=41 Identities=17% Similarity=0.420 Sum_probs=38.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
++.||+.++++.|++.|+++.|+||-....+..++..+|+-
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~ 124 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIP 124 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCC
Confidence 47899999999999999999999999999999999999885
No 67
>PLN02887 hydrolase family protein
Probab=97.60 E-value=0.00013 Score=85.65 Aligned_cols=41 Identities=17% Similarity=0.272 Sum_probs=37.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
.+-+.+.++|++|+++||++++.||.....+..+...+++.
T Consensus 325 ~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~ 365 (580)
T PLN02887 325 QISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVDLA 365 (580)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcc
Confidence 47888999999999999999999999999999999888763
No 68
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.57 E-value=0.0014 Score=69.38 Aligned_cols=41 Identities=7% Similarity=0.001 Sum_probs=37.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
..-+.+.++|++|++.||.+++.||........+..++++-
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 45567899999999999999999999999999999999973
No 69
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=97.54 E-value=0.00076 Score=71.62 Aligned_cols=172 Identities=12% Similarity=0.152 Sum_probs=90.9
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccC------ceEEEEecCC-chhhHHHHH-HHHH-HH
Q 002656 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQG------MKQICITALN-SDSVGKAAK-EAVK-DN 786 (896)
Q Consensus 716 ~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~~~------~~~~~i~~~~-~~~~~~~~~-~~~~-~~ 786 (896)
..++.+...++|+++++.||.++++||.....+..+..+.++..++ ...+...+.. .+....... .... +.
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 3456788899999999999999999999999999999988876543 1222222100 110000000 0000 11
Q ss_pred HHHHHHhhhhhhhcc---CCCCCceEEEEeCchhhhhcchhHHHHHHHHhhhcCceEEE----eCCc--ccHHHHHHHHh
Q 002656 787 ILMQITNASQMIKLE---RDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICC----RVSP--KQKALVTRLVK 857 (896)
Q Consensus 787 ~~~~~~~~~~~~~~~---~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vv~~----r~sP--~qK~~iV~~lk 857 (896)
+.. +......+... .....++.+..+.+.....+ .++...+......+..++.. .+.| ..|..-++.+.
T Consensus 99 ~~~-~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~-~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~ 176 (249)
T TIGR01485 99 VVA-ITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVI-KQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLL 176 (249)
T ss_pred HHH-HHhcCcccccCCccccCCeeEEEEechhhhhHHH-HHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHH
Confidence 111 11111111110 01112223332222211111 11222222211122222222 4555 46888889887
Q ss_pred ccCC---CEEEEEcCChhhHHHHHH-CCccEEEeCc
Q 002656 858 EGTG---KTTLAIGDGANDVGMIQE-ADIGIGISGV 889 (896)
Q Consensus 858 ~~~g---~~vl~iGDG~ND~~~L~~-AdVGI~isg~ 889 (896)
+..| ..|+++||+.||++|++. +..||+|...
T Consensus 177 ~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na 212 (249)
T TIGR01485 177 QKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNA 212 (249)
T ss_pred HHcCCCccCEEEEECChhHHHHHHccCCcEEEECCC
Confidence 6433 579999999999999998 6799999554
No 70
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.53 E-value=0.00067 Score=70.60 Aligned_cols=37 Identities=16% Similarity=0.205 Sum_probs=34.4
Q ss_pred ChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 722 GVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 722 ~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
.+.++|+.|+++||++.++||.....+..+...+++-
T Consensus 20 ~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 20 PAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 3789999999999999999999999999999999874
No 71
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=97.53 E-value=0.00041 Score=74.65 Aligned_cols=41 Identities=17% Similarity=0.178 Sum_probs=37.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
++-+.+.++|++|+++|+++.+.||.....+..+++++++-
T Consensus 20 ~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 60 (272)
T PRK10530 20 TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALD 60 (272)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCC
Confidence 47888999999999999999999999999999999998753
No 72
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.53 E-value=0.0015 Score=70.48 Aligned_cols=42 Identities=10% Similarity=0.039 Sum_probs=38.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 717 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
..+-+++.++|+.|++.|++++++||.....+..++.++|+.
T Consensus 20 ~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 20 TYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred CcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 346677999999999999999999999999999999999974
No 73
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.50 E-value=0.00052 Score=70.41 Aligned_cols=169 Identities=18% Similarity=0.214 Sum_probs=84.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcc--ccccCceEEEEecCCchhhHHHHHHHHH---HHHHHHHH
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACS--LLRQGMKQICITALNSDSVGKAAKEAVK---DNILMQIT 792 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~g--i~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~ 792 (896)
++-+.+.++|++|++.|++++++||.....+..+....+ ++..+.-.+...+...-....+..+... +.+...+.
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAELK 96 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEcccccHHHHHHhhhhcCceee
Confidence 466888999999999999999999999999999887643 4444433333221110000000000000 00000000
Q ss_pred hhhhhhhcc--CCCCCceEEEEeCchhhhhcchhHHHHHHHHhh---hc----CceEEEeCCc--ccHHHHHHHHhccCC
Q 002656 793 NASQMIKLE--RDPHAAYALIIEGKTLAYALEDDMKHHFLGLAV---EC----ASVICCRVSP--KQKALVTRLVKEGTG 861 (896)
Q Consensus 793 ~~~~~~~~~--~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~---~~----~~vv~~r~sP--~qK~~iV~~lk~~~g 861 (896)
......... ........+...+..........+...+..... .+ ...-+..+.| ..|...++.+.+..+
T Consensus 97 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~~~ 176 (204)
T TIGR01484 97 SLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKELN 176 (204)
T ss_pred eeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHHHHhC
Confidence 000000000 001111122222210000111112222222110 00 0112334555 679999998865444
Q ss_pred ---CEEEEEcCChhhHHHHHHCCccEEE
Q 002656 862 ---KTTLAIGDGANDVGMIQEADIGIGI 886 (896)
Q Consensus 862 ---~~vl~iGDG~ND~~~L~~AdVGI~i 886 (896)
..++++||+.||.+|++.|++||+|
T Consensus 177 ~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 177 GKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred CCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 4599999999999999999999986
No 74
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=97.48 E-value=0.0011 Score=69.80 Aligned_cols=47 Identities=28% Similarity=0.418 Sum_probs=38.5
Q ss_pred eCCcc--cHHHHHHHHhccCC---CEEEEEcCChhhHHHHHHCCccEEEeCc
Q 002656 843 RVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGV 889 (896)
Q Consensus 843 r~sP~--qK~~iV~~lk~~~g---~~vl~iGDG~ND~~~L~~AdVGI~isg~ 889 (896)
.+.|. .|...++.+.++.| ..++++||+.||.+|++.|++||+|...
T Consensus 152 ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na 203 (236)
T TIGR02471 152 DVLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNH 203 (236)
T ss_pred EEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCC
Confidence 45664 79999998876544 3589999999999999999999999654
No 75
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.42 E-value=0.0015 Score=69.99 Aligned_cols=166 Identities=11% Similarity=0.078 Sum_probs=85.9
Q ss_pred ccCCChHHHHHHHHH-cCCeEEEEcCCcHHHHHHHHHhccc--cccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhh
Q 002656 718 KLQKGVPQCIDKLAQ-AGLKIWVLTGDKMETAINIGFACSL--LRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNA 794 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~-aGIkv~mlTGD~~~tA~~iA~~~gi--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (896)
.+-+++.++|+.|++ .|++++++||.....+..+....++ +..+.-.+. +.... .............+...+...
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~-~~~~~-~~~~~l~~~~~~~i~~~l~~~ 113 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERR-DINGK-THIVHLPDAIARDISVQLHTA 113 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeee-cCCCC-eeeccCChhHHHHHHHHHHHH
Confidence 445788899999998 7999999999999999888776653 222211111 11100 000000001111111222111
Q ss_pred hhhhhccCCCCCceEEEEeCchhhhhcchh-HHHHHHHHhhhcC-ce-----EEEeCCc--ccHHHHHHHHhccCC---C
Q 002656 795 SQMIKLERDPHAAYALIIEGKTLAYALEDD-MKHHFLGLAVECA-SV-----ICCRVSP--KQKALVTRLVKEGTG---K 862 (896)
Q Consensus 795 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~-~~~~~~~l~~~~~-~v-----v~~r~sP--~qK~~iV~~lk~~~g---~ 862 (896)
........-.....+++........ ..+ +......+...+. .. -+..+.| ..|+.-++.+.+..| .
T Consensus 114 ~~~~pg~~ve~k~~~~~~h~r~~~~--~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~ 191 (266)
T PRK10187 114 LAQLPGAELEAKGMAFALHYRQAPQ--HEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGR 191 (266)
T ss_pred hccCCCcEEEeCCcEEEEECCCCCc--cHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCC
Confidence 1110000001233344444432211 112 2222223332222 11 2334455 479888887765433 5
Q ss_pred EEEEEcCChhhHHHHHHC----CccEEEe
Q 002656 863 TTLAIGDGANDVGMIQEA----DIGIGIS 887 (896)
Q Consensus 863 ~vl~iGDG~ND~~~L~~A----dVGI~is 887 (896)
.|+++||+.||.+|++.+ .+||+|.
T Consensus 192 ~v~~~GD~~nD~~mf~~~~~~~g~~vavg 220 (266)
T PRK10187 192 TPVFVGDDLTDEAGFAVVNRLGGISVKVG 220 (266)
T ss_pred eEEEEcCCccHHHHHHHHHhcCCeEEEEC
Confidence 799999999999999999 8888884
No 76
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.40 E-value=0.0018 Score=75.92 Aligned_cols=39 Identities=8% Similarity=-0.030 Sum_probs=35.0
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccc
Q 002656 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (896)
Q Consensus 719 lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi 757 (896)
.-+.+.++|+.|+++||.+++.||.....+..+++++++
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl 472 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGI 472 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 335678999999999999999999999999999999885
No 77
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=97.38 E-value=0.00035 Score=74.51 Aligned_cols=41 Identities=22% Similarity=0.284 Sum_probs=37.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
++.+++.++|++|++.|++++++||.....+..+..++++-
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~ 56 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLD 56 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 47788999999999999999999999999999999888753
No 78
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.19 E-value=0.0014 Score=68.23 Aligned_cols=42 Identities=21% Similarity=0.233 Sum_probs=38.5
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 717 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
-++.+|+.+.++.|++.|+++.++||.....+..+....|+.
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 133 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIA 133 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCc
Confidence 468899999999999999999999999999998998888874
No 79
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.11 E-value=0.0027 Score=65.96 Aligned_cols=44 Identities=25% Similarity=0.238 Sum_probs=41.0
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002656 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (896)
Q Consensus 716 ~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~ 759 (896)
...+-+|+++++..|+++|++..++|++....+..+....|+..
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~ 130 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLAD 130 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcc
Confidence 56788999999999999999999999999999999999998865
No 80
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=96.97 E-value=0.0026 Score=65.57 Aligned_cols=42 Identities=19% Similarity=0.206 Sum_probs=38.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~ 759 (896)
++.+|+.++++.|++.|+++.++|+-....+..+.+..|+..
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~ 126 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAK 126 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHh
Confidence 688999999999999999999999999888888888888753
No 81
>PLN02382 probable sucrose-phosphatase
Probab=96.91 E-value=0.012 Score=66.95 Aligned_cols=163 Identities=14% Similarity=0.145 Sum_probs=85.2
Q ss_pred HHH-HHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceE------EEEecC-CchhhHHHHH-HHH-HHHHHHHHHhh
Q 002656 725 QCI-DKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQ------ICITAL-NSDSVGKAAK-EAV-KDNILMQITNA 794 (896)
Q Consensus 725 e~I-~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~~~~~~------~~i~~~-~~~~~~~~~~-~~~-~~~~~~~~~~~ 794 (896)
+++ +++++.|+..++.||.....+..+.++.++..++.-+ +..... .++....... ... ...+...+..
T Consensus 35 ~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~~~- 113 (413)
T PLN02382 35 NALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEETSK- 113 (413)
T ss_pred HHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHHhc-
Confidence 344 8889999999999999999999999999987764211 211111 1111000000 000 0001111100
Q ss_pred hhhhhc-cC--CCCCceEEEEeCchhhhhcchhHHHHHHHHhhhcCce----EEEeCCccc--HHHHHHHHhccC---C-
Q 002656 795 SQMIKL-ER--DPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASV----ICCRVSPKQ--KALVTRLVKEGT---G- 861 (896)
Q Consensus 795 ~~~~~~-~~--~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~v----v~~r~sP~q--K~~iV~~lk~~~---g- 861 (896)
...... .. ....+..+..+.+.+..+ ..++.+.+......++.+ -+..+.|.. |+.-++.|.+.. |
T Consensus 114 ~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~-~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi 192 (413)
T PLN02382 114 FPELKLQPETEQRPHKVSFYVDKKKAQEV-IKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEGK 192 (413)
T ss_pred CCCcccCCcccCCCeEEEEEechHHhHHH-HHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcCC
Confidence 000000 00 111222333332222211 122333332211112111 245667755 999999887643 3
Q ss_pred --CEEEEEcCChhhHHHHHHCC-ccEEEeCc
Q 002656 862 --KTTLAIGDGANDVGMIQEAD-IGIGISGV 889 (896)
Q Consensus 862 --~~vl~iGDG~ND~~~L~~Ad-VGI~isg~ 889 (896)
..|+++||+.||.+||+.|+ .||+|+..
T Consensus 193 ~~~~~iafGDs~NDleMl~~ag~~gvam~NA 223 (413)
T PLN02382 193 APVNTLVCGDSGNDAELFSVPDVYGVMVSNA 223 (413)
T ss_pred ChhcEEEEeCCHHHHHHHhcCCCCEEEEcCC
Confidence 47899999999999999999 69999544
No 82
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=96.70 E-value=0.0067 Score=65.21 Aligned_cols=42 Identities=12% Similarity=0.112 Sum_probs=36.4
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 717 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
.++.+++.++++.|++.|+++.|+||-....+..+....|+-
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~ 141 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIG 141 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcH
Confidence 478899999999999999999999998888777777666653
No 83
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=96.68 E-value=0.0072 Score=62.01 Aligned_cols=41 Identities=27% Similarity=0.322 Sum_probs=37.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
++.+|+.++++.|++.|+++.++||.....+..+....|+.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~ 115 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLL 115 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCCh
Confidence 77899999999999999999999999888888888878875
No 84
>PTZ00174 phosphomannomutase; Provisional
Probab=96.66 E-value=0.015 Score=61.54 Aligned_cols=48 Identities=27% Similarity=0.367 Sum_probs=38.5
Q ss_pred EeCCc--ccHHHHHHHHhccCCCEEEEEcC----ChhhHHHHHHC-CccEEEeCcc
Q 002656 842 CRVSP--KQKALVTRLVKEGTGKTTLAIGD----GANDVGMIQEA-DIGIGISGVE 890 (896)
Q Consensus 842 ~r~sP--~qK~~iV~~lk~~~g~~vl~iGD----G~ND~~~L~~A-dVGI~isg~e 890 (896)
..+.| -.|+.-++.|.+. ..-|+++|| |.||.+||+.| -.|+++++.+
T Consensus 180 leI~~~gvsKg~al~~L~~~-~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~ 234 (247)
T PTZ00174 180 FDVFPKGWDKTYCLRHLEND-FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPE 234 (247)
T ss_pred EEeeeCCCcHHHHHHHHHhh-hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHH
Confidence 34455 5699999999873 678999999 99999999987 6888886654
No 85
>PRK08238 hypothetical protein; Validated
Probab=96.62 E-value=0.011 Score=68.43 Aligned_cols=41 Identities=17% Similarity=0.148 Sum_probs=38.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
|+++++.+.|+.++++|++++++|+=....+..++...|+.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlF 112 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLF 112 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 47899999999999999999999999999999999999983
No 86
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=96.62 E-value=0.037 Score=68.14 Aligned_cols=166 Identities=15% Similarity=0.097 Sum_probs=85.1
Q ss_pred cCCChHHHHHHHHH-cCCeEEEEcCCcHHHHHHHHHhcc--ccccCceEEEEecCCchhhH--HHHHHHHHHHHHHHHHh
Q 002656 719 LQKGVPQCIDKLAQ-AGLKIWVLTGDKMETAINIGFACS--LLRQGMKQICITALNSDSVG--KAAKEAVKDNILMQITN 793 (896)
Q Consensus 719 lr~~v~e~I~~L~~-aGIkv~mlTGD~~~tA~~iA~~~g--i~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~ 793 (896)
+-+++.++|+.|.+ .|+.|+++||.............+ ++.++...+...+..-.... ...+ ++.+...+..
T Consensus 515 ~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w---~~~v~~il~~ 591 (726)
T PRK14501 515 PDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEW---KDAVRPILEE 591 (726)
T ss_pred CCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhH---HHHHHHHHHH
Confidence 45688899999999 699999999999998887765444 34433333322111100000 1111 1111111111
Q ss_pred hhhhhhccCCCCCceEEEEeCch----hhhhcchhHHHHHHHHhhhcCceE-----EEeCCc--ccHHHHHHHHhcc-CC
Q 002656 794 ASQMIKLERDPHAAYALIIEGKT----LAYALEDDMKHHFLGLAVECASVI-----CCRVSP--KQKALVTRLVKEG-TG 861 (896)
Q Consensus 794 ~~~~~~~~~~~~~~~~lvi~G~~----l~~~l~~~~~~~~~~l~~~~~~vv-----~~r~sP--~qK~~iV~~lk~~-~g 861 (896)
.........-...+.+++..-.. +......++..++..+.......+ +..+.| -.|+..++.+.+. ..
T Consensus 592 ~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~ 671 (726)
T PRK14501 592 FVDRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPY 671 (726)
T ss_pred HHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCC
Confidence 11111100001122333332111 111111233444433322211111 234445 5799999988763 23
Q ss_pred CEEEEEcCChhhHHHHHHCC---ccEEEe
Q 002656 862 KTTLAIGDGANDVGMIQEAD---IGIGIS 887 (896)
Q Consensus 862 ~~vl~iGDG~ND~~~L~~Ad---VGI~is 887 (896)
..|+++||+.||.+|++.++ .||++.
T Consensus 672 d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG 700 (726)
T PRK14501 672 DFVLAIGDDTTDEDMFRALPETAITVKVG 700 (726)
T ss_pred CEEEEECCCCChHHHHHhcccCceEEEEC
Confidence 58999999999999999974 666663
No 87
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=96.61 E-value=0.017 Score=59.50 Aligned_cols=111 Identities=14% Similarity=0.085 Sum_probs=76.1
Q ss_pred ccCCChHHHHH-HHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhhhh
Q 002656 718 KLQKGVPQCID-KLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (896)
Q Consensus 718 ~lr~~v~e~I~-~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (896)
.+.|++.++|+ .+++.|++++|+|+=....+..+|+..+++... +.+..+-+
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~-~~i~t~le-------------------------- 146 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL-NLIASQIE-------------------------- 146 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC-cEEEEEeE--------------------------
Confidence 57899999996 788899999999999999999999886665421 22222110
Q ss_pred hhhccCCCCCceEEEEeCchhhhhcchhHHHHHHHHhhhcCceEEEeCCcccHHHHHHHHhccCCCEEEEEcCChhhHHH
Q 002656 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGM 876 (896)
Q Consensus 797 ~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vv~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~~ 876 (896)
+.+|.- +..-.|-.++|..-++..-........+=||+.||.||
T Consensus 147 --------------~~~gg~----------------------~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pm 190 (210)
T TIGR01545 147 --------------RGNGGW----------------------VLPLRCLGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPL 190 (210)
T ss_pred --------------EeCCce----------------------EcCccCCChHHHHHHHHHhCCChhheEEecCCcccHHH
Confidence 011100 01223566778776654322123455688999999999
Q ss_pred HHHCCccEEEeCccc
Q 002656 877 IQEADIGIGISGVEG 891 (896)
Q Consensus 877 L~~AdVGI~isg~eg 891 (896)
|+.|+-.+.+...+.
T Consensus 191 L~~a~~~~~Vnp~~~ 205 (210)
T TIGR01545 191 LAFCEHRWRVSKRGE 205 (210)
T ss_pred HHhCCCcEEECcchH
Confidence 999999999966543
No 88
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=96.60 E-value=0.0064 Score=62.87 Aligned_cols=42 Identities=17% Similarity=0.043 Sum_probs=37.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~ 759 (896)
++.+|+.++++.|++.|+++.++||-....+..+-...|+..
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~ 123 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDE 123 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh
Confidence 377999999999999999999999999988888888888753
No 89
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=96.57 E-value=0.0094 Score=63.19 Aligned_cols=44 Identities=14% Similarity=0.242 Sum_probs=40.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccC
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQG 761 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~~~ 761 (896)
+++||+++.++.|++.||++.++||=-...+..+.++.|+....
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~ 164 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPN 164 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcC
Confidence 56999999999999999999999999999999999999987544
No 90
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=96.54 E-value=0.0014 Score=53.43 Aligned_cols=46 Identities=24% Similarity=0.215 Sum_probs=38.6
Q ss_pred CCcCCCCCCCceeeccccchhhhhHHHHHHHhhhHHHHHHHHHHHHhcc
Q 002656 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVT 95 (896)
Q Consensus 47 ~~~~~~~~g~N~i~~~k~~~~~flp~~l~~~f~~~~n~~~l~~~il~~~ 95 (896)
...|+.+||.|.+..++...+. +.++++|.+|+.++++++++++++
T Consensus 16 v~~r~~~~G~N~l~~~~~~s~~---~~~l~~~~~p~~~iL~~~a~is~~ 61 (64)
T smart00831 16 AARRLERYGPNELPPPKKRSPL---LRFLRQFHNPLIYILLAAAVLSAL 61 (64)
T ss_pred HHHHHHHhCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHH
Confidence 3567889999999988744433 789999999999999999999876
No 91
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=96.51 E-value=0.011 Score=63.36 Aligned_cols=42 Identities=17% Similarity=0.164 Sum_probs=38.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~ 759 (896)
++-||+.++++.|++.|+++.|+|+-....+..+-...||..
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~ 183 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRS 183 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh
Confidence 578999999999999999999999999999999988888753
No 92
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=96.51 E-value=0.00058 Score=56.60 Aligned_cols=45 Identities=31% Similarity=0.372 Sum_probs=37.2
Q ss_pred cCCcCCCCCCCceeeccccchhhhhHHHHHHHhhhHHHHHHHHHHHHh
Q 002656 46 MHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLS 93 (896)
Q Consensus 46 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~~f~~~~n~~~l~~~il~ 93 (896)
+...|+.+||+|.++..+...+. +.|+++|..|+++++++++++|
T Consensus 25 ev~~r~~~~G~N~l~~~~~~s~~---~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 25 EVEERRKKYGPNELPEPKKKSLW---RIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp HHHHHHHHHSSSSTTTTTSSSHH---HHHHHHTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccccccccccCcHH---HHHHHHHHhHHHHHHHHHHHHC
Confidence 34567889999999766655544 8899999999999999999886
No 93
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=96.50 E-value=0.01 Score=62.02 Aligned_cols=41 Identities=22% Similarity=0.073 Sum_probs=35.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
++.+|+.++++.|++.|+++.++|+.....+..+-...|+.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~ 135 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWE 135 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCch
Confidence 57899999999999999999999999888777777777764
No 94
>PRK11590 hypothetical protein; Provisional
Probab=96.37 E-value=0.028 Score=57.94 Aligned_cols=112 Identities=12% Similarity=0.078 Sum_probs=77.5
Q ss_pred ccCCChHHHH-HHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhhhh
Q 002656 718 KLQKGVPQCI-DKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (896)
Q Consensus 718 ~lr~~v~e~I-~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (896)
.+.|++.++| +.|++.|++++++|+-....+..++...|+.. ..+.+...-
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l--------------------------- 146 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQM--------------------------- 146 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEE---------------------------
Confidence 4589999999 57888999999999999999999999988632 112222210
Q ss_pred hhhccCCCCCceEEEEeCchhhhhcchhHHHHHHHHhhhcCceEEEeCCcccHHHHHHHHhccCCCEEEEEcCChhhHHH
Q 002656 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGM 876 (896)
Q Consensus 797 ~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vv~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~~ 876 (896)
....+|.- ..-.|..+.|+.-++..=.......-+=||..||.||
T Consensus 147 ------------~~~~tg~~-----------------------~g~~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pm 191 (211)
T PRK11590 147 ------------QRRYGGWV-----------------------LTLRCLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPL 191 (211)
T ss_pred ------------EEEEccEE-----------------------CCccCCChHHHHHHHHHhCCCcceEEEecCCcccHHH
Confidence 01122221 1223666778776664321133455688999999999
Q ss_pred HHHCCccEEEeCcccc
Q 002656 877 IQEADIGIGISGVEGM 892 (896)
Q Consensus 877 L~~AdVGI~isg~eg~ 892 (896)
|+.|+-.+.+......
T Consensus 192 L~~a~~~~~vnp~~~l 207 (211)
T PRK11590 192 LYFCQHRWRVTPRGEL 207 (211)
T ss_pred HHhCCCCEEECccHHh
Confidence 9999999999766544
No 95
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=96.17 E-value=0.008 Score=56.66 Aligned_cols=34 Identities=18% Similarity=0.238 Sum_probs=31.9
Q ss_pred HHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 725 QCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 725 e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
-.|+.|.++||++.++||.+...+..=|+++||-
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~ 75 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIK 75 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCc
Confidence 5899999999999999999999999999999984
No 96
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.14 E-value=0.026 Score=57.44 Aligned_cols=44 Identities=20% Similarity=0.090 Sum_probs=38.9
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002656 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (896)
Q Consensus 716 ~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~ 759 (896)
.+++.++++++++.|++.|+++.++||-....+..+...+|+..
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~ 147 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEI 147 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchh
Confidence 45567788999999999999999999999999999999888753
No 97
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=96.12 E-value=0.062 Score=56.75 Aligned_cols=41 Identities=10% Similarity=0.062 Sum_probs=31.7
Q ss_pred EEEeCCcccHHHHHHHHhccCC---CEEEEEcCChhhHHHHHHC
Q 002656 840 ICCRVSPKQKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEA 880 (896)
Q Consensus 840 v~~r~sP~qK~~iV~~lk~~~g---~~vl~iGDG~ND~~~L~~A 880 (896)
+-.+-.+..|...++.+.+..+ ..++++||+.||..|++.+
T Consensus 159 ~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~ 202 (244)
T TIGR00685 159 VELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVV 202 (244)
T ss_pred EEEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHH
Confidence 3344556679888888765433 4799999999999999999
No 98
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.08 E-value=0.016 Score=60.46 Aligned_cols=40 Identities=18% Similarity=0.167 Sum_probs=34.7
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCC----cHHHHHHHHHhcccc
Q 002656 719 LQKGVPQCIDKLAQAGLKIWVLTGD----KMETAINIGFACSLL 758 (896)
Q Consensus 719 lr~~v~e~I~~L~~aGIkv~mlTGD----~~~tA~~iA~~~gi~ 758 (896)
+.+++.++++.|++.|+++.++|+- ...++..+.+..|+.
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 3445999999999999999999997 667899998888884
No 99
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=96.07 E-value=0.026 Score=57.48 Aligned_cols=41 Identities=15% Similarity=0.181 Sum_probs=36.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
++.+|+.++++.|++.|++++++|+-+...+..+....||.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~ 132 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLD 132 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCCh
Confidence 57899999999999999999999998888888888888864
No 100
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=95.90 E-value=0.021 Score=59.31 Aligned_cols=43 Identities=19% Similarity=0.172 Sum_probs=38.5
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002656 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (896)
Q Consensus 717 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~ 759 (896)
-++-+|+.++|+.|++.|+++.++||.....+..+.+..||..
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~ 133 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRD 133 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchh
Confidence 4678999999999999999999999999888888888888653
No 101
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=95.87 E-value=0.033 Score=59.23 Aligned_cols=42 Identities=26% Similarity=0.182 Sum_probs=37.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~ 759 (896)
++-||+.++++.|++.|+++.++||.....+..+-...|+..
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~ 140 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQG 140 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcC
Confidence 457999999999999999999999999998888877777654
No 102
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=95.83 E-value=0.031 Score=58.32 Aligned_cols=41 Identities=17% Similarity=0.186 Sum_probs=35.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCc----HHHHHHHHHhccc
Q 002656 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDK----METAINIGFACSL 757 (896)
Q Consensus 717 D~lr~~v~e~I~~L~~aGIkv~mlTGD~----~~tA~~iA~~~gi 757 (896)
-.+.+++.++++.|++.|+++.++||.. ..|+.++.+..||
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gi 157 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHI 157 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCC
Confidence 3467889999999999999999999953 5688888887887
No 103
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=95.58 E-value=0.069 Score=55.59 Aligned_cols=42 Identities=14% Similarity=0.052 Sum_probs=35.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~ 759 (896)
++.+|+.++++.|++.|+++.++|+-..+.+...-...|+..
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~ 134 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDA 134 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHH
Confidence 678999999999999999999999988887777666667643
No 104
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=95.48 E-value=0.47 Score=58.91 Aligned_cols=161 Identities=11% Similarity=0.121 Sum_probs=82.3
Q ss_pred ccCCChHHHHHHH-HHcCCeEEEEcCCcHHHHHHHHHh---ccccccCceEEEEecCCc-h---hhHHHHHHHHHHHHHH
Q 002656 718 KLQKGVPQCIDKL-AQAGLKIWVLTGDKMETAINIGFA---CSLLRQGMKQICITALNS-D---SVGKAAKEAVKDNILM 789 (896)
Q Consensus 718 ~lr~~v~e~I~~L-~~aGIkv~mlTGD~~~tA~~iA~~---~gi~~~~~~~~~i~~~~~-~---~~~~~~~~~~~~~~~~ 789 (896)
.+-+++.++++.| ++.|+.|+++||....+....-.. ++++.++.-.+...+... + ......++.....+..
T Consensus 616 ~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~~~~~~~w~~~v~~i~~ 695 (854)
T PLN02205 616 SPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPVADCSWKQIAEPVMQ 695 (854)
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecchhhhHHHHHHHHHHHH
Confidence 4446788888887 667999999999999998887754 345554433332221100 0 0001111111111111
Q ss_pred HHHhhhhhhhccCCCCCceEEEEeCchhhhhc----chhHHHHHHHHhhhcCceE-----EEeCCc--ccHHHHHHHHhc
Q 002656 790 QITNASQMIKLERDPHAAYALIIEGKTLAYAL----EDDMKHHFLGLAVECASVI-----CCRVSP--KQKALVTRLVKE 858 (896)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l----~~~~~~~~~~l~~~~~~vv-----~~r~sP--~qK~~iV~~lk~ 858 (896)
.+ .......--....++++..-.....-. ..++..++..........+ +-.+.| -.|...++.+.+
T Consensus 696 ~y---~ertpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~gvnKG~Al~~Ll~ 772 (854)
T PLN02205 696 LY---TETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGLVAKRLLS 772 (854)
T ss_pred HH---hcCCCchhheecceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeCCCCHHHHHHHHHH
Confidence 11 000000001234556665543321111 1234444443332211111 122333 459998888752
Q ss_pred c---CC---CEEEEEcCChhhHHHHHHCC
Q 002656 859 G---TG---KTTLAIGDGANDVGMIQEAD 881 (896)
Q Consensus 859 ~---~g---~~vl~iGDG~ND~~~L~~Ad 881 (896)
. .| ..|+++||+.||..|++.++
T Consensus 773 ~~~~~g~~~d~vl~~GDD~nDedMF~~~~ 801 (854)
T PLN02205 773 IMQERGMLPDFVLCIGDDRSDEDMFEVIT 801 (854)
T ss_pred HHHhcCCCcccEEEEcCCccHHHHHHHhh
Confidence 1 23 37999999999999999886
No 105
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=95.47 E-value=0.069 Score=56.92 Aligned_cols=42 Identities=14% Similarity=0.085 Sum_probs=37.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~ 759 (896)
++.+|+.++++.|++.|+++.|+|+-....+..+-..+||..
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~ 150 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEG 150 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHh
Confidence 568999999999999999999999999998888888888754
No 106
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=95.43 E-value=0.05 Score=53.53 Aligned_cols=45 Identities=13% Similarity=0.157 Sum_probs=40.5
Q ss_pred eccccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002656 715 VEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (896)
Q Consensus 715 i~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~ 759 (896)
-..++.+++.++++.|++.|++++++|+-.......+....|+..
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~ 118 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDD 118 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGG
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCccccccccccccccc
Confidence 345788999999999999999999999999999999999998873
No 107
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=95.39 E-value=0.073 Score=50.23 Aligned_cols=41 Identities=20% Similarity=0.234 Sum_probs=34.5
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCc--------HHHHHHHHHhccc
Q 002656 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDK--------METAINIGFACSL 757 (896)
Q Consensus 717 D~lr~~v~e~I~~L~~aGIkv~mlTGD~--------~~tA~~iA~~~gi 757 (896)
-++.+++.++++.|+++|++++++|+.. .+.+..+....|+
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 3678999999999999999999999987 5666666666665
No 108
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=95.36 E-value=0.082 Score=56.69 Aligned_cols=41 Identities=24% Similarity=0.128 Sum_probs=35.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
++-||+.++|+.|++.|+++.++||.....+..+-...|+.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~ 141 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQ 141 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhc
Confidence 56799999999999999999999999888777766666654
No 109
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=95.25 E-value=0.093 Score=52.35 Aligned_cols=40 Identities=23% Similarity=0.210 Sum_probs=32.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
++.+|+.++++.|++.|++++++|+-.... ..+...+|+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~ 124 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLR 124 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCH
Confidence 678999999999999999999999977776 4444446664
No 110
>PLN02580 trehalose-phosphatase
Probab=95.22 E-value=0.51 Score=52.62 Aligned_cols=46 Identities=26% Similarity=0.351 Sum_probs=34.9
Q ss_pred EeCCc---ccHHHHHHHHhccCC-----C-EEEEEcCChhhHHHHHH-----CCccEEEe
Q 002656 842 CRVSP---KQKALVTRLVKEGTG-----K-TTLAIGDGANDVGMIQE-----ADIGIGIS 887 (896)
Q Consensus 842 ~r~sP---~qK~~iV~~lk~~~g-----~-~vl~iGDG~ND~~~L~~-----AdVGI~is 887 (896)
-++.| -.|..-|+.+.+..| . .++++||+.||-.|++. +++||.|+
T Consensus 292 lEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg 351 (384)
T PLN02580 292 LEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS 351 (384)
T ss_pred EEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe
Confidence 45566 389999998765443 1 35899999999999996 57788775
No 111
>PRK06769 hypothetical protein; Validated
Probab=95.04 E-value=0.12 Score=51.42 Aligned_cols=40 Identities=23% Similarity=0.228 Sum_probs=30.1
Q ss_pred ccEEEEeeeecc----ccCCChHHHHHHHHHcCCeEEEEcCCcH
Q 002656 706 DLILVGATAVED----KLQKGVPQCIDKLAQAGLKIWVLTGDKM 745 (896)
Q Consensus 706 dl~llG~~~i~D----~lr~~v~e~I~~L~~aGIkv~mlTGD~~ 745 (896)
|-++.|-..+.+ ++.||++++++.|++.|+++.++|+...
T Consensus 12 d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 12 DGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred CCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 444544433332 3679999999999999999999998653
No 112
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=95.01 E-value=0.13 Score=51.02 Aligned_cols=51 Identities=22% Similarity=0.175 Sum_probs=41.6
Q ss_pred EEEEeeeeccccCCChHHHHHHHHHcCCeEEEEcCC-cHHHHHHHHHhcccc
Q 002656 708 ILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGD-KMETAINIGFACSLL 758 (896)
Q Consensus 708 ~llG~~~i~D~lr~~v~e~I~~L~~aGIkv~mlTGD-~~~tA~~iA~~~gi~ 758 (896)
......+-+-++.+|+.++++.|+++|+++.|+|+- ....+..+-...|+-
T Consensus 35 ~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~ 86 (174)
T TIGR01685 35 IIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEIT 86 (174)
T ss_pred eEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcC
Confidence 345555556688999999999999999999999964 888888887777764
No 113
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=94.98 E-value=0.082 Score=54.76 Aligned_cols=42 Identities=19% Similarity=0.163 Sum_probs=38.5
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 717 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
.++.+|+.++++.|++.|+++.++||-....+..+....|+.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 127 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWT 127 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhh
Confidence 479999999999999999999999999999999888888865
No 114
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=94.97 E-value=0.09 Score=50.97 Aligned_cols=38 Identities=18% Similarity=0.296 Sum_probs=33.8
Q ss_pred ccHHHHHHHHhccCCCEEEEEcCChhhHHHHHHCCccEE
Q 002656 847 KQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIG 885 (896)
Q Consensus 847 ~qK~~iV~~lk~~~g~~vl~iGDG~ND~~~L~~AdVGI~ 885 (896)
.+|..+|+.+++ ....+.+||||+.|+.|-+.+|+=+|
T Consensus 146 ~dK~~vI~~l~e-~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 146 HDKSSVIHELSE-PNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred CCcchhHHHhhc-CCceEEEecCCcccccHhhhhhhHhh
Confidence 579999999998 88889999999999999999887554
No 115
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=94.75 E-value=0.12 Score=54.82 Aligned_cols=42 Identities=21% Similarity=0.071 Sum_probs=37.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~ 759 (896)
++.||+.++++.|++.|+++.++|+-....+..+-...||..
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~ 149 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSD 149 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChh
Confidence 567999999999999999999999999999988888888753
No 116
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=94.58 E-value=0.17 Score=53.53 Aligned_cols=157 Identities=14% Similarity=0.202 Sum_probs=78.6
Q ss_pred HHHcCCeEEEEcCCcHHHHHHHHHhccccccCc------eEEEEecCCchhhHHHHH-HHHHH-----HHHHHHHhhhhh
Q 002656 730 LAQAGLKIWVLTGDKMETAINIGFACSLLRQGM------KQICITALNSDSVGKAAK-EAVKD-----NILMQITNASQM 797 (896)
Q Consensus 730 L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~~~~------~~~~i~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~ 797 (896)
..+.++..+++||.+.+.+..+.++.++..++. ..++. +.. ......+ ..+.. .+...+......
T Consensus 31 ~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~-~~~--~~~d~~w~~~i~~~w~~~~v~~~l~~~~~l 107 (247)
T PF05116_consen 31 QARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYY-GEN--WQPDEEWQAHIDERWDRERVEEILAELPGL 107 (247)
T ss_dssp HHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEE-SST--TEE-HHHHHHHHTT--HHHHHHHHHCHCCE
T ss_pred hhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEE-cCC--CcChHHHHHHHHhcCChHHHHHHHHHhhCc
Confidence 336789999999999999999999999865431 11222 111 1111111 11111 111111111110
Q ss_pred hhccCC--CCCceEEEEeCchhhhhcchhHHHHHHHHhhhcCce----EEEeCCc--ccHHHHHHHHhccCC---CEEEE
Q 002656 798 IKLERD--PHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASV----ICCRVSP--KQKALVTRLVKEGTG---KTTLA 866 (896)
Q Consensus 798 ~~~~~~--~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~v----v~~r~sP--~qK~~iV~~lk~~~g---~~vl~ 866 (896)
...... ...+.+..++.+.....+ +++...+......|+.+ -+..+.| ..|..-|+.++++.+ ..|++
T Consensus 108 ~~q~~~~q~~~k~sy~~~~~~~~~~~-~~i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~ 186 (247)
T PF05116_consen 108 RPQPESEQRPFKISYYVDPDDSADIL-EEIRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQVLV 186 (247)
T ss_dssp EEGGCCCGCCTCECEEEETTSHCHHH-HHHHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGGEEE
T ss_pred ccCCccccCCeeEEEEEecccchhHH-HHHHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHHEEE
Confidence 111111 122344445554433322 22333333222222211 1233444 459999999987533 46888
Q ss_pred EcCChhhHHHHHHCCccEEEeCcc
Q 002656 867 IGDGANDVGMIQEADIGIGISGVE 890 (896)
Q Consensus 867 iGDG~ND~~~L~~AdVGI~isg~e 890 (896)
+||+.||.+||..++-||-+.+.+
T Consensus 187 aGDSgND~~mL~~~~~~vvV~Na~ 210 (247)
T PF05116_consen 187 AGDSGNDLEMLEGGDHGVVVGNAQ 210 (247)
T ss_dssp EESSGGGHHHHCCSSEEEE-TTS-
T ss_pred EeCCCCcHHHHcCcCCEEEEcCCC
Confidence 999999999999999999885543
No 117
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=94.57 E-value=0.089 Score=52.72 Aligned_cols=40 Identities=20% Similarity=0.270 Sum_probs=30.9
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 717 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
.++.||+.++|+.|+++|+++.++|+-.. +..+....||.
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~ 125 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLI 125 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcH
Confidence 36789999999999999999999997432 34455556653
No 118
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=94.47 E-value=0.16 Score=52.65 Aligned_cols=41 Identities=12% Similarity=0.130 Sum_probs=35.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
++.+|+.++++.|++.|++++++|+=....+.......|+.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVR 134 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChH
Confidence 57899999999999999999999998777777777777764
No 119
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=94.39 E-value=0.11 Score=56.70 Aligned_cols=45 Identities=20% Similarity=0.084 Sum_probs=41.0
Q ss_pred eeccccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 714 AVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 714 ~i~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
...+++.+++.++|+.|++.|++++++||....++..+...+++.
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~ 227 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQT 227 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHc
Confidence 356789999999999999999999999999999999988888775
No 120
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=94.28 E-value=0.16 Score=48.95 Aligned_cols=27 Identities=26% Similarity=0.401 Sum_probs=24.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDK 744 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~ 744 (896)
++.+|+.++++.|++.|+++.++|...
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~ 53 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQS 53 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence 468999999999999999999999865
No 121
>PLN02811 hydrolase
Probab=94.22 E-value=0.16 Score=52.78 Aligned_cols=32 Identities=22% Similarity=0.348 Sum_probs=27.4
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCcHHHH
Q 002656 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETA 748 (896)
Q Consensus 717 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA 748 (896)
-++.+|+.++|+.|++.|++++++||-.....
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~ 108 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHF 108 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhH
Confidence 35779999999999999999999998765533
No 122
>PLN02940 riboflavin kinase
Probab=94.15 E-value=0.14 Score=57.94 Aligned_cols=40 Identities=13% Similarity=0.043 Sum_probs=33.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHH-hccc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGF-ACSL 757 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~-~~gi 757 (896)
++.+|+.++++.|++.|+++.|+|+-....+..... ..|+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl 133 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGW 133 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccCh
Confidence 467999999999999999999999988777665543 4555
No 123
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=94.06 E-value=0.2 Score=51.11 Aligned_cols=39 Identities=15% Similarity=0.116 Sum_probs=30.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi 757 (896)
++-+|+.++++.|++.|+++.++|+-.. .+..+...+|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~-~~~~~l~~~~l 143 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDS-RLRGLLEALGL 143 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCch-hHHHHHHHCCc
Confidence 6789999999999999999999997544 33555555665
No 124
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=93.98 E-value=0.14 Score=51.30 Aligned_cols=40 Identities=15% Similarity=0.229 Sum_probs=33.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 717 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
-++.+|+.++++.|++.|+++.++|+- ..+..+-...|+.
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~ 126 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLT 126 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChH
Confidence 478999999999999999999999986 5556666667764
No 125
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=93.93 E-value=0.26 Score=53.41 Aligned_cols=37 Identities=24% Similarity=0.299 Sum_probs=31.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHh
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFA 754 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~ 754 (896)
++.||+.++++.|++.|+++.++|+-.......+-..
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~ 180 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNT 180 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH
Confidence 5789999999999999999999999877766655443
No 126
>PRK11587 putative phosphatase; Provisional
Probab=93.85 E-value=0.21 Score=51.65 Aligned_cols=40 Identities=18% Similarity=0.183 Sum_probs=32.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi 757 (896)
++.||+.++++.|+++|+++.++|+.....+...-...|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l 122 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL 122 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC
Confidence 5789999999999999999999999877666555455554
No 127
>PRK09449 dUMP phosphatase; Provisional
Probab=93.82 E-value=0.28 Score=50.93 Aligned_cols=40 Identities=15% Similarity=0.044 Sum_probs=33.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
++.+|+.++++.|+ +|+++.++|+.....+...-...|+.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLR 134 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChH
Confidence 46799999999999 68999999998777777666666664
No 128
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=93.70 E-value=0.28 Score=57.10 Aligned_cols=42 Identities=14% Similarity=0.090 Sum_probs=38.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~ 759 (896)
++.||+.++++.|++.|+++.++|+-....+..+...+|+..
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~ 371 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQ 371 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHh
Confidence 688999999999999999999999999999999988888753
No 129
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=93.62 E-value=0.24 Score=49.05 Aligned_cols=40 Identities=18% Similarity=0.282 Sum_probs=32.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCc-HHHHHHHHHhccc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDK-METAINIGFACSL 757 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~-~~tA~~iA~~~gi 757 (896)
.+-++++++++.|++.|++++++|+-. ...+..+++.+|+
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 567999999999999999999999977 4556666666654
No 130
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=93.62 E-value=0.45 Score=46.42 Aligned_cols=34 Identities=26% Similarity=0.324 Sum_probs=31.3
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCcHHHHH
Q 002656 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAI 749 (896)
Q Consensus 716 ~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~ 749 (896)
+|.+.+++.++++.+++.|++++++||.....+.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~ 58 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQAD 58 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHH
Confidence 5788999999999999999999999999988774
No 131
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=93.33 E-value=0.42 Score=47.88 Aligned_cols=27 Identities=30% Similarity=0.363 Sum_probs=24.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDK 744 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~ 744 (896)
.+.+|+.++++.|++.|+++.++|...
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~ 55 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQS 55 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 457999999999999999999999876
No 132
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=93.25 E-value=0.35 Score=46.76 Aligned_cols=40 Identities=15% Similarity=0.320 Sum_probs=33.1
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhc
Q 002656 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFAC 755 (896)
Q Consensus 716 ~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~ 755 (896)
+.+..+|+.++++.|++.|+++.++|+-....+....+..
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 4445689999999999999999999998888877665543
No 133
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=92.98 E-value=0.64 Score=49.38 Aligned_cols=43 Identities=12% Similarity=0.151 Sum_probs=32.2
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCcHHH---HHHHHHhcccc
Q 002656 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMET---AINIGFACSLL 758 (896)
Q Consensus 716 ~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~t---A~~iA~~~gi~ 758 (896)
..++-+|+.++++.|++.|+++.++|+-.... +...-+..|+-
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~ 161 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFP 161 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcC
Confidence 34567999999999999999999999976433 33344455653
No 134
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=92.88 E-value=0.41 Score=53.44 Aligned_cols=42 Identities=12% Similarity=0.117 Sum_probs=38.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~ 759 (896)
.+.+|+.++++.|++.|+++.++|+-....+..+-...||..
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~ 257 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRG 257 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHH
Confidence 467999999999999999999999999999999888888754
No 135
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=92.73 E-value=0.31 Score=45.79 Aligned_cols=39 Identities=10% Similarity=0.064 Sum_probs=32.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCC-cHHHHHHHHHhcc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGD-KMETAINIGFACS 756 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD-~~~tA~~iA~~~g 756 (896)
++.+|+.++++.|+++|+++.++|+- ....+..+-+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68899999999999999999999998 6766666555444
No 136
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=92.51 E-value=0.52 Score=52.23 Aligned_cols=26 Identities=31% Similarity=0.417 Sum_probs=24.3
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcC
Q 002656 717 DKLQKGVPQCIDKLAQAGLKIWVLTG 742 (896)
Q Consensus 717 D~lr~~v~e~I~~L~~aGIkv~mlTG 742 (896)
-++.|++.++++.|+++|+++.|+|+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTN 54 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTN 54 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEEC
Confidence 36789999999999999999999998
No 137
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=92.47 E-value=2.1 Score=43.08 Aligned_cols=37 Identities=8% Similarity=0.137 Sum_probs=30.0
Q ss_pred ChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 722 GVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 722 ~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
.+.+.+..|+++|+.|+.+|.-...--...-.++|+-
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678999999999999999997776666666677653
No 138
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=92.45 E-value=0.47 Score=49.03 Aligned_cols=41 Identities=20% Similarity=0.293 Sum_probs=36.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~ 759 (896)
++.+|+.++++.|++. ++++++|+-....+..+..+.|+..
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~ 137 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFP 137 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHh
Confidence 6789999999999999 9999999988888888888887753
No 139
>PLN02423 phosphomannomutase
Probab=92.39 E-value=1.6 Score=46.07 Aligned_cols=48 Identities=21% Similarity=0.329 Sum_probs=38.1
Q ss_pred EEeCCc--ccHHHHHHHHhccCCCEEEEEcC----ChhhHHHHHH-CCccEEEeCcc
Q 002656 841 CCRVSP--KQKALVTRLVKEGTGKTTLAIGD----GANDVGMIQE-ADIGIGISGVE 890 (896)
Q Consensus 841 ~~r~sP--~qK~~iV~~lk~~~g~~vl~iGD----G~ND~~~L~~-AdVGI~isg~e 890 (896)
+-.+.| -.|+.-++.|+ ...-|+++|| |.||.+||+. -=+|+.++|-+
T Consensus 180 ~iDi~~~gvnKg~al~~L~--~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~ 234 (245)
T PLN02423 180 SFDVFPQGWDKTYCLQFLE--DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPD 234 (245)
T ss_pred EEEEeeCCCCHHHHHHHhc--CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHH
Confidence 344554 35999999998 4668999999 9999999996 77788887653
No 140
>PLN03017 trehalose-phosphatase
Probab=92.35 E-value=4.9 Score=44.60 Aligned_cols=180 Identities=13% Similarity=0.086 Sum_probs=90.3
Q ss_pred ccEEEEeeeecc--ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhc--cccccCceEEEEecCC-ch-------
Q 002656 706 DLILVGATAVED--KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFAC--SLLRQGMKQICITALN-SD------- 773 (896)
Q Consensus 706 dl~llG~~~i~D--~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~--gi~~~~~~~~~i~~~~-~~------- 773 (896)
|.+|+-++.-.| .+-++..++|++|. .|+.++++||...........-. .++..+.-.+...... ..
T Consensus 119 DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~l~~l~l~g~hGa~i~~p~~~~~~~~~~~~~ 197 (366)
T PLN03017 119 DGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFVKLAELYYAGSHGMDIKGPAKGFSRHKRVKQS 197 (366)
T ss_pred CCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhhcccCceEEEcCCcEEecCCCcceeccccccc
Confidence 555554444333 36788889999999 78999999999999988773211 1222111111100000 00
Q ss_pred hh--HHHHHHHHHHHHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcchhHHHHHHHHhhhcC------ceEEEeCC
Q 002656 774 SV--GKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECA------SVICCRVS 845 (896)
Q Consensus 774 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~------~vv~~r~s 845 (896)
.. ....+....+.+...+...........-..+.+++.+.-.......-.++..++..++.... .--.-++.
T Consensus 198 ~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~~~~~l~~~~~~vl~~~~~l~v~~GkkVlEvR 277 (366)
T PLN03017 198 LLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKKWSELVLQVRSVLKNFPTLKLTQGRKVFEIR 277 (366)
T ss_pred cccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHHHHHHHHHHHHHHHHhCCCcEEeCCCeEEEec
Confidence 00 00001011111222222211111111113455666666544332211233344443332221 11223344
Q ss_pred c---ccHHHHHHHHhccC------CCEEEEEcCChhhHHHHHHCC---ccEEE
Q 002656 846 P---KQKALVTRLVKEGT------GKTTLAIGDGANDVGMIQEAD---IGIGI 886 (896)
Q Consensus 846 P---~qK~~iV~~lk~~~------g~~vl~iGDG~ND~~~L~~Ad---VGI~i 886 (896)
| -+|...|+.+.+.. +..++++||-..|=.|++... -|+||
T Consensus 278 P~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI 330 (366)
T PLN03017 278 PMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGI 330 (366)
T ss_pred CCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEE
Confidence 4 49999999887532 236899999999999998764 34554
No 141
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=92.26 E-value=0.8 Score=44.91 Aligned_cols=26 Identities=35% Similarity=0.542 Sum_probs=23.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCC
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGD 743 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD 743 (896)
++-+|+.++++.|++.|+++.++|.-
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 45689999999999999999999974
No 142
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=92.08 E-value=0.23 Score=48.04 Aligned_cols=43 Identities=16% Similarity=0.010 Sum_probs=37.1
Q ss_pred eccccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 715 VEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 715 i~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
..-+++||+.++++.|+ .++++.|.|.=....|..+-..+++.
T Consensus 42 ~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~ 84 (148)
T smart00577 42 VYVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPK 84 (148)
T ss_pred EEEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcC
Confidence 34468999999999999 57999999999999999888777763
No 143
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=91.89 E-value=0.34 Score=49.80 Aligned_cols=29 Identities=24% Similarity=0.290 Sum_probs=25.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHH
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKME 746 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ 746 (896)
++.+++.++++.|++.|++++++|.....
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~ 122 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPT 122 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 56899999999999999999999986543
No 144
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=90.55 E-value=1 Score=46.91 Aligned_cols=42 Identities=14% Similarity=0.148 Sum_probs=35.5
Q ss_pred ccCCChHHHHHHH--HHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002656 718 KLQKGVPQCIDKL--AQAGLKIWVLTGDKMETAINIGFACSLLR 759 (896)
Q Consensus 718 ~lr~~v~e~I~~L--~~aGIkv~mlTGD~~~tA~~iA~~~gi~~ 759 (896)
|+.++.+++++.| ++.|+.+.++|-=+..--..|-+.-||..
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~ 114 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRD 114 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcc
Confidence 6779999999999 55799999999988887777878788753
No 145
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=90.39 E-value=1.1 Score=45.57 Aligned_cols=30 Identities=23% Similarity=0.306 Sum_probs=26.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHH
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMET 747 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~t 747 (896)
++.+|+.++++.|++.|+++.++|.=....
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~ 113 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH 113 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhh
Confidence 468999999999999999999999965443
No 146
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=90.36 E-value=2.2 Score=42.42 Aligned_cols=27 Identities=19% Similarity=0.346 Sum_probs=24.2
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCcH
Q 002656 719 LQKGVPQCIDKLAQAGLKIWVLTGDKM 745 (896)
Q Consensus 719 lr~~v~e~I~~L~~aGIkv~mlTGD~~ 745 (896)
+.||+.++|+.|+++|+++.++|.=..
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 578999999999999999999997553
No 147
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.41 E-value=2.4 Score=49.13 Aligned_cols=184 Identities=15% Similarity=0.200 Sum_probs=102.5
Q ss_pred hhhcccEEEEeeeeccccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCC-chh------
Q 002656 702 MMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALN-SDS------ 774 (896)
Q Consensus 702 ~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~~~~~~~~i~~~~-~~~------ 774 (896)
+.-.+-.|.|++...-+.+.+....|+.|-++-|+.+..+-.+.....-.|.++||-.-=.-.+.+..+. ...
T Consensus 810 Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa 889 (1354)
T KOG4383|consen 810 QAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPA 889 (1354)
T ss_pred HHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCC
Confidence 3345677999999999999999999999999999999999999999999999999854321122221111 000
Q ss_pred hHH-HHHH-HHHHHHHHHHHhhh--hh-hhccCCCCCceEE-EEeCchhhhhcc-h----------hHHHHHHHHhhhcC
Q 002656 775 VGK-AAKE-AVKDNILMQITNAS--QM-IKLERDPHAAYAL-IIEGKTLAYALE-D----------DMKHHFLGLAVECA 837 (896)
Q Consensus 775 ~~~-~~~~-~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~l-vi~G~~l~~~l~-~----------~~~~~~~~l~~~~~ 837 (896)
..+ ..++ ...+++. ++.... .. +.-+.......++ -++.+. ....+ + +...|+.++- +..
T Consensus 890 ~~q~a~qkpSlhddln-qia~ddaeg~lL~~Eeg~~dliSfq~~dsdi-~kf~ed~N~AkLPrGihnVRPHL~~iD-NVP 966 (1354)
T KOG4383|consen 890 HEQFAAQKPSLHDDLN-QIALDDAEGELLDCEEGARDLISFQKMDSDI-AKFAEDPNIAKLPRGIHNVRPHLDEID-NVP 966 (1354)
T ss_pred ChhhhccCcchhHHHH-HhhhcccccceeehhhcccCCccccccccch-hhhcCCCchhhcCcchhhcCccccccc-Ccc
Confidence 000 0000 1111111 110000 00 0000000000000 000000 00000 0 0111111110 000
Q ss_pred --ceEEEeCCcccHHHHHHHHhccCCCEEEEEcCChhhHH--HHHHCCccEEEeCc
Q 002656 838 --SVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVG--MIQEADIGIGISGV 889 (896)
Q Consensus 838 --~vv~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~--~L~~AdVGI~isg~ 889 (896)
+-.|..++|+.--+.|+.+|+ .|.+|+.+|..+|-.. ..-+|||+|++-..
T Consensus 967 LLV~LFTDcnpeamcEMIeIMQE-~GEVtcclGS~aN~rNSciflkadISialD~l 1021 (1354)
T KOG4383|consen 967 LLVGLFTDCNPEAMCEMIEIMQE-NGEVTCCLGSCANARNSCIFLKADISIALDDL 1021 (1354)
T ss_pred eeeeeccCCCHHHHHHHHHHHHH-cCcEEEEeccccccccceEEEccceeEEeccC
Confidence 126899999999999999999 8999999999988654 45689999987443
No 148
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=89.36 E-value=1.4 Score=43.41 Aligned_cols=26 Identities=27% Similarity=0.492 Sum_probs=23.1
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCc
Q 002656 719 LQKGVPQCIDKLAQAGLKIWVLTGDK 744 (896)
Q Consensus 719 lr~~v~e~I~~L~~aGIkv~mlTGD~ 744 (896)
+-+|+.++++.|+++|+++.++|.-.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~ 68 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQS 68 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 34999999999999999999999743
No 149
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=89.21 E-value=2.7 Score=43.48 Aligned_cols=40 Identities=18% Similarity=0.223 Sum_probs=32.8
Q ss_pred eccccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHh
Q 002656 715 VEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFA 754 (896)
Q Consensus 715 i~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~ 754 (896)
++-++.+|+.++++.|+++|+++.++|.-.......+-..
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~ 131 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGH 131 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhh
Confidence 3457899999999999999999999999877765555433
No 150
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=89.12 E-value=1.3 Score=44.63 Aligned_cols=147 Identities=16% Similarity=0.192 Sum_probs=73.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHHHHHHHHhhhhh
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (896)
++-||+.++.+.|.+.= ..+++|---..-+..+|.-+|+-..+.....++-++... ..+.+ +.+.. .
T Consensus 83 ~lvPgA~etm~~l~~~~-tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~-PeeeR----~E~L~-------~ 149 (315)
T COG4030 83 KLVPGAEETMATLQERW-TPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAV-PEEER----EELLS-------I 149 (315)
T ss_pred ccCCChHHHHHHHhccC-CceEEeccHHHHHHHHHHhcCCCccccccccccCccccC-ChHHH----HHHHH-------h
Confidence 45699999999987653 444454445566778888777744332222222111100 00011 01110 0
Q ss_pred hhccCCCCCceEEEEeCchhhhhcchhHH----HHHHHHhhhcCceEEEeCCcccHHHHHHHHhccCC--CEEEEEcCCh
Q 002656 798 IKLERDPHAAYALIIEGKTLAYALEDDMK----HHFLGLAVECASVICCRVSPKQKALVTRLVKEGTG--KTTLAIGDGA 871 (896)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~l~~~~~----~~~~~l~~~~~~vv~~r~sP~qK~~iV~~lk~~~g--~~vl~iGDG~ 871 (896)
+. ---.++|+.|-.-+++-+- ....+++...++ |.+ ..|+.+++.+-+..+ ...+.+||++
T Consensus 150 ~~--------~~~~~~geelfe~lDe~F~rLip~E~gki~~~vk~-VGg----g~ka~i~e~~~ele~~d~sa~~VGDSI 216 (315)
T COG4030 150 ID--------VIASLSGEELFEKLDELFSRLIPSEVGKIVESVKA-VGG----GEKAKIMEGYCELEGIDFSAVVVGDSI 216 (315)
T ss_pred cC--------ccccccHHHHHHHHHHHHhhcCHHHHHHHHHhhhh-ccC----cchhHHHHHHHhhcCCCcceeEecCcc
Confidence 00 0014566655443332100 111222222222 221 457777776654322 2457899999
Q ss_pred hhHHHHHHCC----ccEEEeCcc
Q 002656 872 NDVGMIQEAD----IGIGISGVE 890 (896)
Q Consensus 872 ND~~~L~~Ad----VGI~isg~e 890 (896)
.|+.||+.+. +.|+..|+|
T Consensus 217 tDv~ml~~~rgrGglAvaFNGNe 239 (315)
T COG4030 217 TDVKMLEAARGRGGLAVAFNGNE 239 (315)
T ss_pred cchHHHHHhhccCceEEEecCCc
Confidence 9999999885 445556766
No 151
>PLN02151 trehalose-phosphatase
Probab=88.44 E-value=13 Score=41.26 Aligned_cols=204 Identities=15% Similarity=0.128 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHHHhhhccCHHHHHHHHH-HhhhcccEEEEeee----eccc--cCCChHHHHHHHHHcCCeEEEEcCCc
Q 002656 672 SEYSAWNSEFQKAKSSIGADREATLEHVS-DMMEKDLILVGATA----VEDK--LQKGVPQCIDKLAQAGLKIWVLTGDK 744 (896)
Q Consensus 672 ~e~~~~~~~~~~a~~~~~~~r~~~l~~~~-~~iE~dl~llG~~~----i~D~--lr~~v~e~I~~L~~aGIkv~mlTGD~ 744 (896)
.+|..|..++-.|...+ ++.+.... ..+--=|.|=|.++ --|. +-+++.++|+.|. .+..|+++||..
T Consensus 71 ~~~~~w~~~~p~a~~~~----~~~~~~~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~ 145 (354)
T PLN02151 71 NKQSCWIKEHPSALNMF----EEILHKSEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVSGRC 145 (354)
T ss_pred hhHHHHHHhCChHHHHH----HHHHHhhcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEEECCC
Confidence 57899999987777654 11111111 00000122334444 2222 4567788999998 567999999999
Q ss_pred HHHHHHHHHhccc--ccc-CceEEEEecCCchh-----h---HHHHHHHHHHHHHHHHHhhhhhhhccCCCCCceEEEEe
Q 002656 745 METAINIGFACSL--LRQ-GMKQICITALNSDS-----V---GKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIE 813 (896)
Q Consensus 745 ~~tA~~iA~~~gi--~~~-~~~~~~i~~~~~~~-----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~ 813 (896)
.........-.++ ..+ ++..-.-....... . ....+....+.+...+...........-..+.+++.+.
T Consensus 146 ~~~l~~~~~~~~l~laGsHG~e~~~p~~g~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavH 225 (354)
T PLN02151 146 REKVSSFVKLTELYYAGSHGMDIKGPEQGSKYKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVH 225 (354)
T ss_pred HHHHHHHcCCccceEEEeCCceeecCCCCccccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEE
Confidence 9988876543222 111 11110000000000 0 00001111111111121111111111113455666655
Q ss_pred CchhhhhcchhHHHHHHHHhhhc--------CceEEEeCC-cccHHHHHHHHhccCC------CEEEEEcCChhhHHHHH
Q 002656 814 GKTLAYALEDDMKHHFLGLAVEC--------ASVICCRVS-PKQKALVTRLVKEGTG------KTTLAIGDGANDVGMIQ 878 (896)
Q Consensus 814 G~~l~~~l~~~~~~~~~~l~~~~--------~~vv~~r~s-P~qK~~iV~~lk~~~g------~~vl~iGDG~ND~~~L~ 878 (896)
-.....-...++..++..+.... +.|+=-|-. .-+|...|+.+.+..+ ..++++||-..|=.|++
T Consensus 226 YR~a~~~~~~~l~~~l~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~ 305 (354)
T PLN02151 226 FRCVEENKWSDLANQVRSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFK 305 (354)
T ss_pred eCCCChHHHHHHHHHHHHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHH
Confidence 44332211122334444333322 223333322 3489999998875322 25899999999999988
Q ss_pred HC
Q 002656 879 EA 880 (896)
Q Consensus 879 ~A 880 (896)
..
T Consensus 306 ~L 307 (354)
T PLN02151 306 IL 307 (354)
T ss_pred HH
Confidence 64
No 152
>PHA02597 30.2 hypothetical protein; Provisional
Probab=87.56 E-value=2.9 Score=42.24 Aligned_cols=39 Identities=13% Similarity=0.020 Sum_probs=25.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi 757 (896)
++.||+.++++.|++.+ +.+++|.-+..+....-...++
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l 112 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNL 112 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCH
Confidence 46899999999999975 5677776444433333334443
No 153
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=86.73 E-value=2.4 Score=44.54 Aligned_cols=48 Identities=10% Similarity=0.127 Sum_probs=36.9
Q ss_pred EeeeeccccCCChHHHHHHHHHcCCeEEEEcCCcHHHHH--HHHHhcccc
Q 002656 711 GATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAI--NIGFACSLL 758 (896)
Q Consensus 711 G~~~i~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~--~iA~~~gi~ 758 (896)
|.+.-...+-|+++++++.|+++|+++.++|.-....+. ....+.|+-
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 666667788999999999999999999999995443333 345666664
No 154
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=86.64 E-value=2 Score=47.34 Aligned_cols=37 Identities=16% Similarity=0.194 Sum_probs=32.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHh
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFA 754 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~ 754 (896)
++-+++.++|+.|++.||++.++|.-....|..+-..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHh
Confidence 3568999999999999999999999999988887765
No 155
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=85.86 E-value=3.8 Score=42.43 Aligned_cols=30 Identities=23% Similarity=0.292 Sum_probs=27.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHH
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMET 747 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~t 747 (896)
+.-+++.++++.|++.|++|+++||.....
T Consensus 120 paip~al~l~~~l~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 120 PALPEGLKLYQKIIELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence 566999999999999999999999998755
No 156
>PLN02645 phosphoglycolate phosphatase
Probab=85.81 E-value=2.9 Score=45.91 Aligned_cols=47 Identities=30% Similarity=0.437 Sum_probs=39.9
Q ss_pred EeeeeccccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHH---Hhccc
Q 002656 711 GATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIG---FACSL 757 (896)
Q Consensus 711 G~~~i~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA---~~~gi 757 (896)
|++.-.+.+=++++++|+.|++.|++++++|+....+...++ ...|+
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 777777778899999999999999999999999987777776 45565
No 157
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=84.94 E-value=3 Score=40.28 Aligned_cols=41 Identities=15% Similarity=0.213 Sum_probs=34.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
..-|++.+=++.++.+||++.++|.-+...+...+..+|+-
T Consensus 46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~ 86 (175)
T COG2179 46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP 86 (175)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc
Confidence 34567777788999999999999998888888888888864
No 158
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=84.80 E-value=1.3 Score=39.67 Aligned_cols=51 Identities=14% Similarity=0.152 Sum_probs=37.1
Q ss_pred EeeeeccccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHH---HhccccccC
Q 002656 711 GATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIG---FACSLLRQG 761 (896)
Q Consensus 711 G~~~i~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA---~~~gi~~~~ 761 (896)
|++..-+.+=||+.++|+.|+++|++++++|-....+...++ ..+|+--..
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~ 60 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDE 60 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--G
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCc
Confidence 666677888899999999999999999999998866655544 556765433
No 159
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=84.76 E-value=3 Score=53.53 Aligned_cols=41 Identities=20% Similarity=0.032 Sum_probs=36.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
.+-+|+.++++.|+++|++++++|+-....+..+-...|+.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~ 201 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLP 201 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCC
Confidence 36799999999999999999999998888888777777774
No 160
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=82.45 E-value=6.8 Score=40.98 Aligned_cols=165 Identities=11% Similarity=0.051 Sum_probs=74.4
Q ss_pred ccCCChHHHHHHHHHc-CCeEEEEcCCcHHHHHHHHH--hccccccCceEEEEecCCchhh-HHHHHHHHHHHHHHHHHh
Q 002656 718 KLQKGVPQCIDKLAQA-GLKIWVLTGDKMETAINIGF--ACSLLRQGMKQICITALNSDSV-GKAAKEAVKDNILMQITN 793 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~a-GIkv~mlTGD~~~tA~~iA~--~~gi~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~ 793 (896)
.+-+++.++++.|.+. +..|||+||........... .++++.++.-.+...+...... .........+.+...++.
T Consensus 19 ~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 98 (235)
T PF02358_consen 19 VPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRRPGGSEWTNLPADEDLEWKDEVREILEY 98 (235)
T ss_dssp ---HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEETTE-EEE-TTGGGGHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEeccCccccccccccccchHHHHHHHHHHHH
Confidence 4457788999999877 45799999999998555432 2333433322232222211000 000000111222222222
Q ss_pred hhhhhhccCCCCCceEEEEeCchhhhh----cchhHHHHHHHHhhh--------cCceEEEeCCcccHHHHHHHHhccCC
Q 002656 794 ASQMIKLERDPHAAYALIIEGKTLAYA----LEDDMKHHFLGLAVE--------CASVICCRVSPKQKALVTRLVKEGTG 861 (896)
Q Consensus 794 ~~~~~~~~~~~~~~~~lvi~G~~l~~~----l~~~~~~~~~~l~~~--------~~~vv~~r~sP~qK~~iV~~lk~~~g 861 (896)
.........-..+.+++++.-.....- ...++..++..+... -+.+|=.|-.-..|...|+.+.+..+
T Consensus 99 ~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEvrp~~~~KG~av~~ll~~~~ 178 (235)
T PF02358_consen 99 FAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEVRPPGVNKGSAVRRLLEELP 178 (235)
T ss_dssp HHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEEE-TT--HHHHHHHHHTTS-
T ss_pred HHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEEEeCCCChHHHHHHHHHhcC
Confidence 222211111123445555554333322 112333333332222 24455566666669999997765443
Q ss_pred ------CEEEEEcCChhhHHHHHHCCc
Q 002656 862 ------KTTLAIGDGANDVGMIQEADI 882 (896)
Q Consensus 862 ------~~vl~iGDG~ND~~~L~~AdV 882 (896)
..++++||...|-.|++..+=
T Consensus 179 ~~~~~~~~~l~~GDD~tDE~~f~~~~~ 205 (235)
T PF02358_consen 179 FAGPKPDFVLYIGDDRTDEDAFRALRE 205 (235)
T ss_dssp --------EEEEESSHHHHHHHHTTTT
T ss_pred ccccccceeEEecCCCCCHHHHHHHHh
Confidence 379999999999999998554
No 161
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=81.73 E-value=3.2 Score=42.81 Aligned_cols=39 Identities=8% Similarity=0.077 Sum_probs=30.5
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 717 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
-++.+|++++++.| ++++.++|+.....+...-...|+.
T Consensus 87 ~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~ 125 (221)
T PRK10563 87 LEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGML 125 (221)
T ss_pred CCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChH
Confidence 35568999999998 4999999998877776665556664
No 162
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=81.64 E-value=4.8 Score=40.17 Aligned_cols=38 Identities=11% Similarity=-0.018 Sum_probs=31.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
++.+|+.++++.|+ .+++++|+-....+..+....|+.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~ 121 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIE 121 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcH
Confidence 46789999999997 489999998888888888878764
No 163
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=79.92 E-value=13 Score=36.90 Aligned_cols=50 Identities=20% Similarity=0.407 Sum_probs=37.8
Q ss_pred cCceEEEeCCccc--------HHHHHHHHhccC--CCEEEEEcCChhhHHHHHHCCccEEE
Q 002656 836 CASVICCRVSPKQ--------KALVTRLVKEGT--GKTTLAIGDGANDVGMIQEADIGIGI 886 (896)
Q Consensus 836 ~~~vv~~r~sP~q--------K~~iV~~lk~~~--g~~vl~iGDG~ND~~~L~~AdVGI~i 886 (896)
...+.+|.-.|++ ...+.+.++++. -....+|||-..|..+-..|+++ ++
T Consensus 87 id~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~-~~ 146 (181)
T COG0241 87 IDGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK-GV 146 (181)
T ss_pred cceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC-ce
Confidence 3456778777775 577777887731 25789999999999998888887 54
No 164
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=75.84 E-value=11 Score=37.07 Aligned_cols=43 Identities=14% Similarity=0.203 Sum_probs=35.9
Q ss_pred eccccCCChHHHHHHHHHcCC--eEEEEcCC-------cHHHHHHHHHhccc
Q 002656 715 VEDKLQKGVPQCIDKLAQAGL--KIWVLTGD-------KMETAINIGFACSL 757 (896)
Q Consensus 715 i~D~lr~~v~e~I~~L~~aGI--kv~mlTGD-------~~~tA~~iA~~~gi 757 (896)
=++++-+++.+.+++|++.+. +|+++|-- +.+.|..+++.+|+
T Consensus 56 ~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgI 107 (168)
T PF09419_consen 56 YEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGI 107 (168)
T ss_pred CcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCC
Confidence 467788999999999999987 49999885 37788888888885
No 165
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=74.67 E-value=33 Score=44.36 Aligned_cols=21 Identities=29% Similarity=0.156 Sum_probs=18.4
Q ss_pred CCeEEEee--cccCccCcEEEec
Q 002656 145 NGVFSYKP--WEKIQVGDIVKVE 165 (896)
Q Consensus 145 ~g~~~~i~--~~~L~vGDII~l~ 165 (896)
-|....+. ..+..|.|.+.|+
T Consensus 249 pGDiv~l~~~~g~~iPaD~~ll~ 271 (1054)
T TIGR01657 249 PGDIVSIPRPEEKTMPCDSVLLS 271 (1054)
T ss_pred CCCEEEEecCCCCEecceEEEEe
Confidence 37788898 8999999999996
No 166
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=72.92 E-value=8.5 Score=44.81 Aligned_cols=35 Identities=20% Similarity=0.102 Sum_probs=32.9
Q ss_pred CCCeEEEeecccCccCcEEEeccCCcCCceEEEEe
Q 002656 144 GNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLS 178 (896)
Q Consensus 144 r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~~lL~ 178 (896)
|||+..++|..-|+.||||-+++|+..||.+.=++
T Consensus 162 RDGhlm~lP~~LLVeGDiIa~RPGQeafan~~g~~ 196 (1354)
T KOG4383|consen 162 RDGHLMELPRILLVEGDIIAFRPGQEAFANCEGFD 196 (1354)
T ss_pred ccCeeeecceeEEEeccEEEecCCccccccccccC
Confidence 89999999999999999999999999999987665
No 167
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=71.94 E-value=5.8 Score=42.18 Aligned_cols=48 Identities=17% Similarity=0.218 Sum_probs=37.2
Q ss_pred Eeeeeccc----cCCChHHHHHHHHHcCCeEEEEcCCcHHH---HHHHHHhcccc
Q 002656 711 GATAVEDK----LQKGVPQCIDKLAQAGLKIWVLTGDKMET---AINIGFACSLL 758 (896)
Q Consensus 711 G~~~i~D~----lr~~v~e~I~~L~~aGIkv~mlTGD~~~t---A~~iA~~~gi~ 758 (896)
|.+.-.+. +=+++.++|+.|+++|++++++||....+ ......++|+-
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 55555555 77899999999999999999999977776 44445556753
No 168
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=71.01 E-value=8.5 Score=40.69 Aligned_cols=50 Identities=8% Similarity=0.077 Sum_probs=40.5
Q ss_pred EeeeeccccCCChHHHHHHHHHcCCeEEEEcC---CcHHHHHHHHHhcccccc
Q 002656 711 GATAVEDKLQKGVPQCIDKLAQAGLKIWVLTG---DKMETAINIGFACSLLRQ 760 (896)
Q Consensus 711 G~~~i~D~lr~~v~e~I~~L~~aGIkv~mlTG---D~~~tA~~iA~~~gi~~~ 760 (896)
|++.-.+.+=+++.++|+.|++.|++++++|| ...+......++.|+-..
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~ 62 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPAT 62 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 55555677778999999999999999999996 667777777788887543
No 169
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=70.73 E-value=39 Score=32.82 Aligned_cols=34 Identities=29% Similarity=0.348 Sum_probs=30.3
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHH
Q 002656 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAIN 750 (896)
Q Consensus 717 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~ 750 (896)
|..++|+.+....+++.|.+++-||+...-.|-.
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~ 59 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANR 59 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHH
Confidence 7999999999999999999999999987655543
No 170
>PRK10444 UMP phosphatase; Provisional
Probab=70.65 E-value=4.5 Score=42.71 Aligned_cols=45 Identities=16% Similarity=0.271 Sum_probs=40.5
Q ss_pred EeeeeccccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhc
Q 002656 711 GATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFAC 755 (896)
Q Consensus 711 G~~~i~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~ 755 (896)
|++.-.+.+-+++.++|+.|+++|++++++||....+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 677777888999999999999999999999999999888887775
No 171
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=69.64 E-value=12 Score=39.27 Aligned_cols=28 Identities=11% Similarity=0.267 Sum_probs=22.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHH
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKME 746 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ 746 (896)
++-+|++++++.|++. +++.++|.-+..
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~ 140 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ 140 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch
Confidence 4668999999999975 899999885543
No 172
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=68.91 E-value=7.1 Score=41.79 Aligned_cols=41 Identities=10% Similarity=0.126 Sum_probs=37.3
Q ss_pred cC-CChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002656 719 LQ-KGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (896)
Q Consensus 719 lr-~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~ 759 (896)
+| |++.+++++|+++|+++.++|+-..+.+...-.++||..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 45 999999999999999999999888888888999999974
No 173
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=68.18 E-value=7.6 Score=41.62 Aligned_cols=41 Identities=15% Similarity=0.105 Sum_probs=36.1
Q ss_pred cC-CChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002656 719 LQ-KGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (896)
Q Consensus 719 lr-~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~ 759 (896)
+| |++.+++++|+++|+++.++|+-..+.+..+....||..
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~ 189 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEG 189 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCc
Confidence 35 899999999999999999999777778888999999853
No 174
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=66.58 E-value=16 Score=36.42 Aligned_cols=36 Identities=17% Similarity=0.049 Sum_probs=30.3
Q ss_pred hHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002656 723 VPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (896)
Q Consensus 723 v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~ 759 (896)
..++++.|++. +++.++||-....+..+-...|+..
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~ 127 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRR 127 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHh
Confidence 46899999865 8999999999899888888888753
No 175
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=65.59 E-value=13 Score=38.75 Aligned_cols=29 Identities=17% Similarity=0.290 Sum_probs=25.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHH
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKME 746 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ 746 (896)
+.=|++.+.++.+++.|++|..+||....
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~ 143 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPES 143 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCch
Confidence 55588999999999999999999998765
No 176
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=62.35 E-value=1.6e+02 Score=31.28 Aligned_cols=168 Identities=8% Similarity=0.009 Sum_probs=87.6
Q ss_pred eeccccCCChHHHHHHHHHc-CCeEEEEcCCcHHHHHHHHHhc--cccccCceEE-EEecCCchhhHHHHHHHHHHHHHH
Q 002656 714 AVEDKLQKGVPQCIDKLAQA-GLKIWVLTGDKMETAINIGFAC--SLLRQGMKQI-CITALNSDSVGKAAKEAVKDNILM 789 (896)
Q Consensus 714 ~i~D~lr~~v~e~I~~L~~a-GIkv~mlTGD~~~tA~~iA~~~--gi~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~ 789 (896)
.....+-++..++++.|... ..-+||+||.+++-......-- ||+.++.-.+ .+++...........-...+.+..
T Consensus 36 p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~ 115 (266)
T COG1877 36 PEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAA 115 (266)
T ss_pred ccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEecCHHHHhhHHHHHHH
Confidence 34456667788899999877 5679999999999887766522 3333332222 333332222211222121122222
Q ss_pred HHHhhhhhhhccCCCCCceEEEEeCchhhhhcch--hHHHHHHHHh------hhcCceEEEeCCcccHHHHHHHHhccC-
Q 002656 790 QITNASQMIKLERDPHAAYALIIEGKTLAYALED--DMKHHFLGLA------VECASVICCRVSPKQKALVTRLVKEGT- 860 (896)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~--~~~~~~~~l~------~~~~~vv~~r~sP~qK~~iV~~lk~~~- 860 (896)
.++..........-..+.+++.+.=.....-... .+......+. ..-+.+|-+|-+-.-|+..++.+.+..
T Consensus 116 ~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~~ 195 (266)
T COG1877 116 ILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIKYIMDELP 195 (266)
T ss_pred HHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHHHHHhcCC
Confidence 2333222222111112222332221111100000 0000000000 112567889988888999999776543
Q ss_pred --CCEEEEEcCChhhHHHHHHCC
Q 002656 861 --GKTTLAIGDGANDVGMIQEAD 881 (896)
Q Consensus 861 --g~~vl~iGDG~ND~~~L~~Ad 881 (896)
|..++..||-.-|-.|++..+
T Consensus 196 ~~~~~~~~aGDD~TDE~~F~~v~ 218 (266)
T COG1877 196 FDGRFPIFAGDDLTDEDAFAAVN 218 (266)
T ss_pred CCCCcceecCCCCccHHHHHhhc
Confidence 346899999999999999888
No 177
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=62.25 E-value=7.5 Score=38.09 Aligned_cols=45 Identities=11% Similarity=-0.006 Sum_probs=38.4
Q ss_pred eeeeccccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccc
Q 002656 712 ATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (896)
Q Consensus 712 ~~~i~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi 757 (896)
...+.=..|||+.+.++.|.+. ..+++.|--....|..+...++.
T Consensus 36 ~~~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp 80 (162)
T TIGR02251 36 IIPVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDR 80 (162)
T ss_pred EEEEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCc
Confidence 3345557999999999999987 99999999999999998877664
No 178
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=61.72 E-value=16 Score=36.76 Aligned_cols=49 Identities=22% Similarity=0.283 Sum_probs=42.9
Q ss_pred cEEEEeeeeccccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhc
Q 002656 707 LILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFAC 755 (896)
Q Consensus 707 l~llG~~~i~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~ 755 (896)
+.+-|.+-++|..-|++.|+++.|+.++.+|..+|.-+.+.-..+..++
T Consensus 12 lDlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL 60 (262)
T KOG3040|consen 12 LDLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERL 60 (262)
T ss_pred EeccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHH
Confidence 4578999999999999999999999999999999988887776666554
No 179
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=60.11 E-value=16 Score=46.67 Aligned_cols=22 Identities=14% Similarity=-0.044 Sum_probs=19.4
Q ss_pred CCeEEEeecccCccCcEEEecc
Q 002656 145 NGVFSYKPWEKIQVGDIVKVEK 166 (896)
Q Consensus 145 ~g~~~~i~~~~L~vGDII~l~~ 166 (896)
-|....+...+.+|.|.+.++.
T Consensus 186 ~GDiV~l~~Gd~IPaD~~li~g 207 (941)
T TIGR01517 186 VGDIVSLSTGDVVPADGVFISG 207 (941)
T ss_pred CCCEEEECCCCEecccEEEEEc
Confidence 4789999999999999999964
No 180
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=58.16 E-value=9.4 Score=37.59 Aligned_cols=34 Identities=6% Similarity=-0.018 Sum_probs=24.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
++.||+.++++ +++++|.=.......+....||.
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~ 123 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLP 123 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCH
Confidence 57899999988 36777776666666666666653
No 181
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=57.46 E-value=29 Score=40.80 Aligned_cols=26 Identities=23% Similarity=0.501 Sum_probs=23.4
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCc
Q 002656 719 LQKGVPQCIDKLAQAGLKIWVLTGDK 744 (896)
Q Consensus 719 lr~~v~e~I~~L~~aGIkv~mlTGD~ 744 (896)
+-++++++|+.|+++|++++|+|.=.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~ 223 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQG 223 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCc
Confidence 45999999999999999999999843
No 182
>PTZ00445 p36-lilke protein; Provisional
Probab=53.88 E-value=20 Score=36.39 Aligned_cols=29 Identities=21% Similarity=0.151 Sum_probs=25.5
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCcHHH
Q 002656 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMET 747 (896)
Q Consensus 719 lr~~v~e~I~~L~~aGIkv~mlTGD~~~t 747 (896)
++|+....++.|+++||+|.++|=-.+++
T Consensus 76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~ 104 (219)
T PTZ00445 76 VTPDFKILGKRLKNSNIKISVVTFSDKEL 104 (219)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEccchhh
Confidence 68889999999999999999999766554
No 183
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=53.76 E-value=42 Score=34.67 Aligned_cols=43 Identities=21% Similarity=0.206 Sum_probs=38.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002656 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (896)
Q Consensus 717 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~ 759 (896)
.++.+|+.+++..|+..|+.+.+.|+=....+..+....|+..
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~ 127 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLD 127 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChh
Confidence 4778999999999999999999999988888888888888875
No 184
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=53.57 E-value=26 Score=37.71 Aligned_cols=51 Identities=18% Similarity=0.236 Sum_probs=37.1
Q ss_pred EeeeeccccCCChHHHHHHHHHcCCeEEEEcCCcHHHH---HHHHHhccccccC
Q 002656 711 GATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETA---INIGFACSLLRQG 761 (896)
Q Consensus 711 G~~~i~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA---~~iA~~~gi~~~~ 761 (896)
|++.-.+.+=+++.++|+.|++.|++++++||....+. ..--++.|+....
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~ 64 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLA 64 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCh
Confidence 55555677778999999999999999999999654333 2333567775443
No 185
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=51.82 E-value=79 Score=32.35 Aligned_cols=41 Identities=15% Similarity=0.049 Sum_probs=32.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~~ 759 (896)
++-+++.++++.|+.. .+++++|--....+.....++||..
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~ 139 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLD 139 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChh
Confidence 4557888888888888 8899999866777777888888553
No 186
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=51.04 E-value=22 Score=32.58 Aligned_cols=38 Identities=24% Similarity=0.498 Sum_probs=29.8
Q ss_pred CChHHHHHHHHHcCC-eEEEEcCCcHHHHHHHHHhcccc
Q 002656 721 KGVPQCIDKLAQAGL-KIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 721 ~~v~e~I~~L~~aGI-kv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
+.+++.++++.+.|+ .+|+.+|...+.++..|++.|+-
T Consensus 66 ~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi~ 104 (116)
T PF13380_consen 66 DKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGIR 104 (116)
T ss_dssp HHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-E
T ss_pred HHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCCE
Confidence 567899999999999 69999999999999999998863
No 187
>PF12791 RsgI_N: Anti-sigma factor N-terminus; InterPro: IPR024449 The heat shock genes in Bacillus subtilis can be classified into several groups according to their regulation [], and the sigma gene, sigI, of Bacillus subtilis belongs to the group IV heat-shock response genes and has many orthologues in the bacterial phylum Firmicutes []. Regulation of sigma factor I is carried out by RsgI from the same operon. This entry represents the N-terminal cytoplasmic portion of RsgI ('upstream' of the single transmembrane helix) which has been shown to interact directly with Sigma-I [].
Probab=49.57 E-value=27 Score=27.25 Aligned_cols=39 Identities=13% Similarity=0.266 Sum_probs=31.6
Q ss_pred hccceEEEEeCCCeEEEeecc-cCccCcEEEeccCCcCCc
Q 002656 134 VNARKVSVHVGNGVFSYKPWE-KIQVGDIVKVEKDQFFPA 172 (896)
Q Consensus 134 ~n~~~~~V~~r~g~~~~i~~~-~L~vGDII~l~~ge~vPa 172 (896)
+.+..+.|+..+|+|..|+-. +..+||.|.+...+..+.
T Consensus 3 i~~~~aiVlT~dGeF~~ik~~~~~~vG~eI~~~~~~~~~~ 42 (56)
T PF12791_consen 3 IKKKYAIVLTPDGEFIKIKRKPGMEVGQEIEFDEKDIINK 42 (56)
T ss_pred CcCCEEEEEcCCCcEEEEeCCCCCcccCEEEEechhhccc
Confidence 345678888899999998754 799999999998887654
No 188
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=48.28 E-value=1e+02 Score=32.84 Aligned_cols=30 Identities=23% Similarity=0.282 Sum_probs=26.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCcHH
Q 002656 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKME 746 (896)
Q Consensus 717 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ 746 (896)
.|.-+++.+..+.+++.|++|+.+||....
T Consensus 144 ApAlp~al~ly~~l~~~G~kIf~VSgR~e~ 173 (275)
T TIGR01680 144 APALPETLKNYNKLVSLGFKIIFLSGRLKD 173 (275)
T ss_pred CCCChHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 355579999999999999999999999864
No 189
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=48.17 E-value=75 Score=37.85 Aligned_cols=180 Identities=12% Similarity=0.057 Sum_probs=109.2
Q ss_pred eeccccchhhhhHHHHHHHhhhHHHHHHHHHHHHh-cccCCCCCCcccccchhhhhhHHHHHHHHHHHHHhcchhhhccc
Q 002656 59 ISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLS-VTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDKEVNAR 137 (896)
Q Consensus 59 i~~~k~~~~~flp~~l~~~f~~~~n~~~l~~~il~-~~~~~~~~~~~~~~~l~~vl~i~~~~~~~~d~~r~k~~~~~n~~ 137 (896)
.+...|+++.+++..-|.+|.+.+++++.+..++. +-.-++..++..+.+++++.++--..+-++.++|.+..+...-.
T Consensus 87 qKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r~~rd~~~Nse~y~ 166 (1051)
T KOG0210|consen 87 QKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKRRRRDRELNSEKYT 166 (1051)
T ss_pred cccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhe
Confidence 34467889999999999999999999998877653 21112234444555666777888888999999998876655431
Q ss_pred eE----------EEEeCCCeEEEeecccCccCcEEEeccCCcCCceEEEEeecCCCceE-------EEEeccCCCCCcce
Q 002656 138 KV----------SVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGIC-------YVETMNLDGETNLK 200 (896)
Q Consensus 138 ~~----------~V~~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~~lL~ss~~~G~~-------~Vdes~LtGEs~~~ 200 (896)
+. .-+ .-|....+.-.+=+|-|.|.|+.-|.-- -..+.+..-||.. .--+..++-++.+-
T Consensus 167 ~ltr~~~~~~~Ss~i-~vGDvi~v~K~~RVPADmilLrTsd~sg--~~FiRTDQLDGETDWKLrl~vp~tQ~l~~~~el~ 243 (1051)
T KOG0210|consen 167 KLTRDGTRREPSSDI-KVGDVIIVHKDERVPADMILLRTSDKSG--SCFIRTDQLDGETDWKLRLPVPRTQHLTEDSELM 243 (1051)
T ss_pred eeccCCccccccccc-ccccEEEEecCCcCCcceEEEEccCCCC--ceEEeccccCCcccceeeccchhhccCCcccchh
Confidence 11 112 2366777888889999999998665431 1223333333321 01133344443332
Q ss_pred eecccccCCCCCchhhhccceEEEEeeCCC------CCceeEEEEEEECCe
Q 002656 201 VKRAMEATSPLNEDEAFKEFTGTVKCENPN------PSLYTFVGNIEYDRE 245 (896)
Q Consensus 201 ~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~------~~~~~f~Gt~~~~g~ 245 (896)
.-. ........++..+-|++...+.+ -....|++|++-.|.
T Consensus 244 ~i~----v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t 290 (1051)
T KOG0210|consen 244 EIS----VYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGT 290 (1051)
T ss_pred eEE----EeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCc
Confidence 211 11111234455677877765443 235678999888776
No 190
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=46.77 E-value=18 Score=33.79 Aligned_cols=33 Identities=15% Similarity=0.091 Sum_probs=28.5
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCcHHHHH
Q 002656 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAI 749 (896)
Q Consensus 717 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~ 749 (896)
+++.+++.++++.|++.|++++++||.......
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 557788889999999999999999999887654
No 191
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=44.74 E-value=1.2e+02 Score=35.51 Aligned_cols=43 Identities=14% Similarity=0.093 Sum_probs=30.2
Q ss_pred CcccHHHHHHHHhccCCCEEEEEcCChhhHHHHHHCCccEEEeC
Q 002656 845 SPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISG 888 (896)
Q Consensus 845 sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~~L~~AdVGI~isg 888 (896)
--++|..-++.... ......+.||..+|.+||+.|+-+..+.-
T Consensus 173 ~Ge~Kv~rl~~~~g-~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 173 VGDHKRDAVLKEFG-DALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred ccHHHHHHHHHHhC-CCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 33557666663321 12223799999999999999999988744
No 192
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=43.79 E-value=93 Score=31.85 Aligned_cols=41 Identities=15% Similarity=0.138 Sum_probs=32.7
Q ss_pred ccCCChHHHHHHHHHcCC-eEEEEcCCcHHHHHHHHHhcccc
Q 002656 718 KLQKGVPQCIDKLAQAGL-KIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGI-kv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
|+-|++.++|+.+++.|- .++++|--|.----.+-+..||-
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~ 125 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIH 125 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHH
Confidence 567999999999999996 99999988876666666666553
No 193
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=43.23 E-value=4.3e+02 Score=33.76 Aligned_cols=164 Identities=10% Similarity=0.042 Sum_probs=89.0
Q ss_pred CCeEEEeecccCccCcEEEeccCCcCCceEEEEeecCCCceEEEEec---cCCCCCcceeecccccCCCCCchhhhccce
Q 002656 145 NGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETM---NLDGETNLKVKRAMEATSPLNEDEAFKEFT 221 (896)
Q Consensus 145 ~g~~~~i~~~~L~vGDII~l~~ge~vPaD~~lL~ss~~~G~~~Vdes---~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~ 221 (896)
-|....+...|.+|-|...|+..+ . .++.+.-+|...-=+. .+.++..|..
T Consensus 160 pGDiV~l~~gd~vPAD~rLl~~~~-l-----~VdEs~LTGES~pv~K~~~~~~~~~~~~~-------------------- 213 (917)
T COG0474 160 PGDIVLLEAGDVVPADLRLLESSD-L-----EVDESALTGESLPVEKQALPLTKSDAPLG-------------------- 213 (917)
T ss_pred CCcEEEECCCCccccceEEEEecC-c-----eEEcccccCCCcchhcccccccccccccc--------------------
Confidence 478999999999999999999776 3 2332222232111111 1111222211
Q ss_pred EEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeeccceeecCCeEEEEEEEeccccceeecc-CCCCCCcCHHHHHHHH
Q 002656 222 GTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNA-TTSPSKRSGIEKKMDK 300 (896)
Q Consensus 222 ~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~g~Vi~tG~~Tk~~~~~-~~~~~k~s~l~~~~~~ 300 (896)
.+.....|+||.+.+|+.. | .+. ..|.-++-|+.++.+... .....-.-.+.+....
T Consensus 214 -------~d~~n~l~sGt~V~~G~~~----------g-iVv----aTG~~T~~G~ia~~~~~~~~~~t~l~~~l~~~~~~ 271 (917)
T COG0474 214 -------LDRDNMLFSGTTVVSGRAK----------G-IVV----ATGFETEFGKIARLLPTKKEVKTPLQRKLNKLGKF 271 (917)
T ss_pred -------CCccceEEeCCEEEcceEE----------E-EEE----EEcCccHHHHHHHhhccccccCCcHHHHHHHHHHH
Confidence 1123356999999999832 1 112 567788889999888777 3333333445555555
Q ss_pred HHHHHHHHHHHHHHHHHHHhhe-eecccCCCccccCCCCCCcccCCCCCchhHHHHHHHHHHHhccccccchhhhHHHHH
Q 002656 301 IIFILFAILVLISLISSIGFAV-KINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVK 379 (896)
Q Consensus 301 ~~~~~~~~~ii~~~i~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~l~~~~ 379 (896)
+..+.+.+.+++.++....... |... . +..+.-++.+.-..+|..+.+++.+..
T Consensus 272 l~~~~l~~~~~~~~~~~~~~~~~~~~~----~---------------------~~~v~l~va~IPegLp~~vti~la~g~ 326 (917)
T COG0474 272 LLVLALVLGALVFVVGLFRGGNGLLES----F---------------------LTALALAVAAVPEGLPAVVTIALALGA 326 (917)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccHHHH----H---------------------HHHHHHHHhccccchHHHHHHHHHHHH
Confidence 5555444444444444332111 1111 0 134444566666777877776666544
Q ss_pred HH
Q 002656 380 FL 381 (896)
Q Consensus 380 ~~ 381 (896)
..
T Consensus 327 ~~ 328 (917)
T COG0474 327 QR 328 (917)
T ss_pred HH
Confidence 33
No 194
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=43.00 E-value=1.5e+02 Score=36.92 Aligned_cols=24 Identities=8% Similarity=0.063 Sum_probs=19.8
Q ss_pred cHHHHHHHHHHHHhcCCeEEEEEE
Q 002656 643 YEEATTKLLNEYGEAGLRTLALAY 666 (896)
Q Consensus 643 ~~~~~~~~~~~~~~~G~r~l~~A~ 666 (896)
.++...+.++.+.+.|.++..+.-
T Consensus 443 ~R~~a~~aI~~l~~aGI~v~miTG 466 (755)
T TIGR01647 443 PRHDTKETIERARHLGVEVKMVTG 466 (755)
T ss_pred ChhhHHHHHHHHHHCCCeEEEECC
Confidence 567778888899999999887774
No 195
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=41.80 E-value=2.6e+02 Score=36.07 Aligned_cols=203 Identities=10% Similarity=-0.003 Sum_probs=100.6
Q ss_pred CCeEEEeecccCccCcEEEeccCCcCCceEEEEeecCCCceEEEEeccCCCCCcceeecccccCCCCCchhhhccceEEE
Q 002656 145 NGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTV 224 (896)
Q Consensus 145 ~g~~~~i~~~~L~vGDII~l~~ge~vPaD~~lL~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i 224 (896)
-|....+...+.+|.|.+.++.+. +.++.|.-+|...--+.. .|.+. ..+.+.
T Consensus 161 ~GDiv~l~~Gd~IPaD~~il~~~~------l~VdeS~LTGES~pv~K~-~~~~~---~~~~~~----------------- 213 (997)
T TIGR01106 161 VGDLVEVKGGDRIPADLRIISAQG------CKVDNSSLTGESEPQTRS-PEFTH---ENPLET----------------- 213 (997)
T ss_pred CCCEEEECCCCEEeeeEEEEEccC------cEEEccccCCCCCceecc-CCCcc---cCcccc-----------------
Confidence 478999999999999999998652 223333222332211111 11110 011110
Q ss_pred EeeCCCCCceeEEEEEEECCeeeecCCCCeeeccceeecCCeEEEEEEEeccccceeeccCCC-CCCcCHHHHHHHHHHH
Q 002656 225 KCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTS-PSKRSGIEKKMDKIIF 303 (896)
Q Consensus 225 ~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~g~Vi~tG~~Tk~~~~~~~~-~~k~s~l~~~~~~~~~ 303 (896)
....|+||.+++|...- .+. ..|.=++.|.-.++....... ..-...+++..+.++.
T Consensus 214 -------~n~l~~Gt~v~~G~~~~-----------~V~----~tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~ 271 (997)
T TIGR01106 214 -------RNIAFFSTNCVEGTARG-----------IVV----NTGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITG 271 (997)
T ss_pred -------CCeEEeccEeeeeeEEE-----------EEE----EccccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHH
Confidence 11359999999886211 111 234445556555554444322 2224677888888887
Q ss_pred HHHHHHHHHHHHHHHHhheeecccCCCccccCCCCCCcccCCCCCchhHHHHHHHHHHHhccccccchhhhHHHHHH--H
Q 002656 304 ILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKF--L 381 (896)
Q Consensus 304 ~~~~~~ii~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~l~~~~~--~ 381 (896)
+.+++.+++.++..+...-|... + ...+...+..+-..+|..+.+++..... .
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~-----~--------------------~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~ 326 (997)
T TIGR01106 272 VAVFLGVSFFILSLILGYTWLEA-----V--------------------IFLIGIIVANVPEGLLATVTVCLTLTAKRMA 326 (997)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHH-----H--------------------HHHHHHHhhcCCccchHHHHHHHHHHHHHHH
Confidence 77666665555544433333321 1 1122223333555667777666554322 2
Q ss_pred HHHHHhhccccccCCCCCCcee--ecccccccccceeEEEec
Q 002656 382 QAIFINQDISMYDDESGIPAQA--RTSNLNEELGQVDTILSD 421 (896)
Q Consensus 382 ~~~~i~~d~~m~~~~~~~~i~v--~~~~~~e~Lg~v~~i~~D 421 (896)
....+-++.........-.++| |+..+-|.-=.|..+++|
T Consensus 327 ~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~ 368 (997)
T TIGR01106 327 RKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFD 368 (997)
T ss_pred HCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEEC
Confidence 2222222222222224455555 455555554455555554
No 196
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=39.00 E-value=83 Score=29.71 Aligned_cols=80 Identities=13% Similarity=0.159 Sum_probs=54.4
Q ss_pred HHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHhhhcccEEEEeeeeccccCCChHHHHHHHHH
Q 002656 653 EYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQ 732 (896)
Q Consensus 653 ~~~~~G~r~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~ 732 (896)
-+...|+.|+.+....- .+++ ++ .-.|.+-.++|+-++-=.--+..+++++.|++
T Consensus 24 ~l~~~GfeVi~LG~~v~-~e~~---------------------v~---aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~ 78 (134)
T TIGR01501 24 AFTNAGFNVVNLGVLSP-QEEF---------------------IK---AAIETKADAILVSSLYGHGEIDCKGLRQKCDE 78 (134)
T ss_pred HHHHCCCEEEECCCCCC-HHHH---------------------HH---HHHHcCCCEEEEecccccCHHHHHHHHHHHHH
Confidence 45679999999886433 2222 11 22345777888888877667778999999999
Q ss_pred cCC--eEEEEcCC------cHHHHHHHHHhccc
Q 002656 733 AGL--KIWVLTGD------KMETAINIGFACSL 757 (896)
Q Consensus 733 aGI--kv~mlTGD------~~~tA~~iA~~~gi 757 (896)
+|+ .+||+=|- ....-..-++++|+
T Consensus 79 ~gl~~~~vivGG~~vi~~~d~~~~~~~l~~~Gv 111 (134)
T TIGR01501 79 AGLEGILLYVGGNLVVGKQDFPDVEKRFKEMGF 111 (134)
T ss_pred CCCCCCEEEecCCcCcChhhhHHHHHHHHHcCC
Confidence 997 56778883 12222455788885
No 197
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=38.41 E-value=79 Score=25.15 Aligned_cols=40 Identities=23% Similarity=0.243 Sum_probs=29.7
Q ss_pred eeeccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002656 280 VMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIG 319 (896)
Q Consensus 280 ~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~ii~~~i~~i~ 319 (896)
.+.|.-..+.+++.+.+.++.+...+.+++++.+++++++
T Consensus 23 ~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~ 62 (64)
T smart00831 23 YGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALL 62 (64)
T ss_pred hCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 4556555666688999999999888887777777776654
No 198
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=36.47 E-value=42 Score=35.80 Aligned_cols=47 Identities=17% Similarity=0.227 Sum_probs=40.0
Q ss_pred EEEeeeeccccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhc
Q 002656 709 LVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFAC 755 (896)
Q Consensus 709 llG~~~i~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~ 755 (896)
+=|++.--..+=|++.++|+.|+++|++++.+|--...+...++.++
T Consensus 15 lDGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 15 LDGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred CcCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 34888888888999999999999999999999998888888555443
No 199
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=36.06 E-value=3e+02 Score=25.28 Aligned_cols=96 Identities=13% Similarity=0.062 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHhhhcccEEEEeeeeccccCCChH
Q 002656 645 EATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVP 724 (896)
Q Consensus 645 ~~~~~~~~~~~~~G~r~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~ 724 (896)
....+.++.+...|+++.+++-+........ |.. .++...+.+.-...+.-... ...+|...
T Consensus 28 ~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~-~~~---------------~~~~~l~~~~l~~~~~~~~~--~~~KP~~~ 89 (132)
T TIGR01662 28 PEVPDALAELKEAGYKVVIVTNQSGIGRGKF-SSG---------------RVARRLEELGVPIDVLYACP--HCRKPKPG 89 (132)
T ss_pred CCHHHHHHHHHHCCCEEEEEECCccccccHH-HHH---------------HHHHHHHHCCCCEEEEEECC--CCCCCChH
Confidence 3456678888899999988886542211100 111 11111122111112221222 23344333
Q ss_pred HHHHHHHHc-CC--eEEEEcCCcHHHHHHHHHhcccc
Q 002656 725 QCIDKLAQA-GL--KIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 725 e~I~~L~~a-GI--kv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
-....+++. ++ .=.+.=||+..+-+..|+++|+.
T Consensus 90 ~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 90 MFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred HHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 333445555 46 33666799777889999999985
No 200
>cd06919 Asp_decarbox Aspartate alpha-decarboxylase or L-aspartate 1-decarboxylase, a pyruvoyl group-dependent decarboxylase in beta-alanine production. Decarboxylation of aspartate is the major route of beta-alanine production in bacteria, and is catalyzed by the enzyme L-aspartate decarboxylase (ADC), EC:4.1.1.11 which requires a pyruvoyl group for its activity. The pyruvoyl cofactor is covalently bound to the enzyme. The protein is synthesized as a proenzyme and cleaved via self-processing at Gly23-Ser24 to yield an alpha chain (C-terminal fragment) and beta chain (N-terminal fragment), and the pyruvoyl group. Beta-alanine is required for the biosynthesis of pantothenate, in which the enzyme plays a critical regulatory role. The active site of the tetrameric enzyme is located at the interface of two subunits, with a Lysine and a Histidine from the beta chain of one subunit forming the active site with residues from the alpha chain of the adjacent subunit. This alignment
Probab=34.61 E-value=61 Score=29.20 Aligned_cols=83 Identities=22% Similarity=0.356 Sum_probs=53.4
Q ss_pred ceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEeeeecCCCCCeeEEEEEEcCCCcEEEEE
Q 002656 546 NLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLC 625 (896)
Q Consensus 546 ~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~ 625 (896)
.+.|.++=-.|..|+++|.- ..|+.+.+..-+.--+..+.++..+.|.-.+..
T Consensus 18 ~L~YeGSitID~~Ll~aagi---------------------------~~~E~V~I~Nv~NG~Rf~TYvI~g~~gSg~I~l 70 (111)
T cd06919 18 DLNYEGSITIDEDLLEAAGI---------------------------LPYEKVLVVNVNNGARFETYVIPGERGSGVICL 70 (111)
T ss_pred ccccceeEEECHHHHHhcCC---------------------------CCCCEEEEEECCCCcEEEEEEEEcCCCCCEEEe
Confidence 56787777788888887642 233334444444444444455555555555555
Q ss_pred cccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHH
Q 002656 626 KGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAW 677 (896)
Q Consensus 626 KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~k~l~~~e~~~~ 677 (896)
-||. .++.+.|-|++.+||-.++++|...|
T Consensus 71 NGAA----------------------Ar~~~~GD~vII~sy~~~~~~e~~~~ 100 (111)
T cd06919 71 NGAA----------------------ARLGQPGDRVIIMAYALMDEEEAEGH 100 (111)
T ss_pred CCHH----------------------HhcCCCCCEEEEEECccCCHHHHhcC
Confidence 6653 25567899999999999998876543
No 201
>PF12148 DUF3590: Protein of unknown function (DUF3590); InterPro: IPR021991 This domain is found in eukaryotes, and is typically between 83 and 97 amino acids in length. It is found in association with PF00097 from PFAM, PF02182 from PFAM, PF00628 from PFAM, PF00240 from PFAM. There are two conserved sequence motifs: RAR and NYN. The domain is part of the protein NIRF which has zinc finger and ubiquitinating domains. The function of this domain is likely to be mainly structural, however this has not been confirmed. ; PDB: 3DB4_A 3ASK_A 3DB3_A 2L3R_A.
Probab=33.54 E-value=28 Score=29.81 Aligned_cols=24 Identities=25% Similarity=0.492 Sum_probs=14.1
Q ss_pred EEEeecccCccCcEEEeccCCcCC
Q 002656 148 FSYKPWEKIQVGDIVKVEKDQFFP 171 (896)
Q Consensus 148 ~~~i~~~~L~vGDII~l~~ge~vP 171 (896)
...++|.+|.||++|.|.-+-.-|
T Consensus 58 Rt~l~w~~L~VG~~VMvNYN~d~P 81 (85)
T PF12148_consen 58 RTILKWDELKVGQVVMVNYNVDEP 81 (85)
T ss_dssp -SBE-GGG--TT-EEEEEE-TTST
T ss_pred eEeccHHhCCcccEEEEecCCCCc
Confidence 456899999999999997654444
No 202
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=33.23 E-value=1.1e+02 Score=28.11 Aligned_cols=81 Identities=14% Similarity=0.183 Sum_probs=55.9
Q ss_pred HHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHhhhcccEEEEeeeeccccCCChHHHHHHHHH
Q 002656 653 EYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQ 732 (896)
Q Consensus 653 ~~~~~G~r~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~ 732 (896)
-+...|++|+.+... .+.++..+ .-.+.+-.++++-+......+.+++.++.|++
T Consensus 22 ~l~~~G~~vi~lG~~-vp~e~~~~------------------------~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~ 76 (122)
T cd02071 22 ALRDAGFEVIYTGLR-QTPEEIVE------------------------AAIQEDVDVIGLSSLSGGHMTLFPEVIELLRE 76 (122)
T ss_pred HHHHCCCEEEECCCC-CCHHHHHH------------------------HHHHcCCCEEEEcccchhhHHHHHHHHHHHHh
Confidence 567899999988865 34333211 12245667888888888888999999999999
Q ss_pred cCC-e-EEEEcCCcHHHHHHHHHhcccc
Q 002656 733 AGL-K-IWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 733 aGI-k-v~mlTGD~~~tA~~iA~~~gi~ 758 (896)
+|. + .+++=|-.+.--.+-.++.|+.
T Consensus 77 ~~~~~i~i~~GG~~~~~~~~~~~~~G~d 104 (122)
T cd02071 77 LGAGDILVVGGGIIPPEDYELLKEMGVA 104 (122)
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHCCCC
Confidence 977 4 3556665554445666688853
No 203
>TIGR00223 panD L-aspartate-alpha-decarboxylase. Members of this family are aspartate 1-decarboxylase, the enzyme that makes beta-alanine and C02 from aspartate. Beta-alanine is then used to make the vitamin pantothenate, from which coenzyme A is made. Aspartate 1-decarboxylase is synthesized as a proenzyme, then cleaved to an alpha (C-terminal) and beta (N-terminal) subunit with a pyruvoyl group.
Probab=33.05 E-value=64 Score=29.76 Aligned_cols=85 Identities=16% Similarity=0.251 Sum_probs=54.3
Q ss_pred CceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEeeeecCCCCCeeEEEEEEcCCCcEEEE
Q 002656 545 GNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLL 624 (896)
Q Consensus 545 ~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~ 624 (896)
..+.|.++=-.|..|+++|.- ..|+.+.+..-+.-.+.-+.++..+.|.-.+.
T Consensus 18 a~L~Y~GSItID~~Lm~aagi---------------------------~p~E~V~V~Nv~NG~Rf~TYvI~G~~GSg~I~ 70 (126)
T TIGR00223 18 ANLNYEGSITIDEDLLDAAGI---------------------------LENEKVDIVNVNNGKRFSTYAIAGKRGSRIIC 70 (126)
T ss_pred cccccceeEEECHHHHHhcCC---------------------------CCCCEEEEEECCCCcEEEEEEEEcCCCCCEEE
Confidence 356788777788889887653 23333344444444444444555455555555
Q ss_pred EcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHH
Q 002656 625 CKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWN 678 (896)
Q Consensus 625 ~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~k~l~~~e~~~~~ 678 (896)
.-||. .++.+.|=+++.+||-.++++|...|+
T Consensus 71 lNGAA----------------------Arl~~~GD~VII~sy~~~~~~e~~~~~ 102 (126)
T TIGR00223 71 VNGAA----------------------ARCVSVGDIVIIASYVTMPDEEARTHR 102 (126)
T ss_pred eCCHH----------------------HhcCCCCCEEEEEECCcCCHHHHhcCC
Confidence 55653 256678999999999999998866543
No 204
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=32.73 E-value=67 Score=31.18 Aligned_cols=45 Identities=13% Similarity=-0.025 Sum_probs=38.5
Q ss_pred eeeccccCCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002656 713 TAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 713 ~~i~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~gi~ 758 (896)
....=++|||+.+.++.|++. +++++.|.=....|..+...++.-
T Consensus 53 ~~~~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 53 MWYLTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred eEEEEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 344557899999999999955 999999999999999999888754
No 205
>PRK05449 aspartate alpha-decarboxylase; Provisional
Probab=32.15 E-value=70 Score=29.58 Aligned_cols=85 Identities=21% Similarity=0.287 Sum_probs=54.5
Q ss_pred CceEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEeeeecCCCCCeeEEEEEEcCCCcEEEE
Q 002656 545 GNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLL 624 (896)
Q Consensus 545 ~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~ 624 (896)
..+.|.++=-.|..|+++|.- ..|+.+.+..-+.-.+..+.++..+.|.-.+.
T Consensus 18 a~L~Y~GSitID~~Ll~aagi---------------------------~p~E~V~V~Nv~NG~Rf~TYvI~g~~GSg~I~ 70 (126)
T PRK05449 18 ADLNYEGSITIDEDLLDAAGI---------------------------LENEKVQIVNVNNGARFETYVIAGERGSGVIC 70 (126)
T ss_pred cccccceeEEECHHHHHhcCC---------------------------CCCCEEEEEECCCCcEEEEEEEEcCCCCCEEE
Confidence 356788777788889887653 23333344444444444444555555555555
Q ss_pred EcccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHH
Q 002656 625 CKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWN 678 (896)
Q Consensus 625 ~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~k~l~~~e~~~~~ 678 (896)
.-||. .++.+.|=|++.+||-.++++|...|+
T Consensus 71 lNGAA----------------------Ar~~~~GD~vII~ay~~~~~~e~~~~~ 102 (126)
T PRK05449 71 LNGAA----------------------ARLVQVGDLVIIAAYAQMDEEEAKTHK 102 (126)
T ss_pred eCCHH----------------------HhcCCCCCEEEEEECccCCHHHHhcCC
Confidence 56653 255678999999999999998865543
No 206
>PF13253 DUF4044: Protein of unknown function (DUF4044)
Probab=31.73 E-value=1.6e+02 Score=20.75 Aligned_cols=19 Identities=21% Similarity=0.427 Sum_probs=12.1
Q ss_pred CCCcCHHHHHHHHHHHHHH
Q 002656 288 PSKRSGIEKKMDKIIFILF 306 (896)
Q Consensus 288 ~~k~s~l~~~~~~~~~~~~ 306 (896)
+.|+|.+|+...-++.++.
T Consensus 3 kkkKS~fekiT~v~v~lM~ 21 (35)
T PF13253_consen 3 KKKKSTFEKITMVVVWLML 21 (35)
T ss_pred CccccHHHHHHHHHHHHHH
Confidence 4567888877665554443
No 207
>PRK08508 biotin synthase; Provisional
Probab=31.66 E-value=5.4e+02 Score=27.52 Aligned_cols=45 Identities=13% Similarity=0.048 Sum_probs=30.1
Q ss_pred hHHHHHHHHHcCC-eEE------------EEcCCcHHH---HHHHHHhccccccCceEEEE
Q 002656 723 VPQCIDKLAQAGL-KIW------------VLTGDKMET---AINIGFACSLLRQGMKQICI 767 (896)
Q Consensus 723 v~e~I~~L~~aGI-kv~------------mlTGD~~~t---A~~iA~~~gi~~~~~~~~~i 767 (896)
.++.++.|++||+ .+. +.||...+- ++..|+++|+-....-++.+
T Consensus 101 ~~e~l~~Lk~aGld~~~~~lEt~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~sg~I~Gl 161 (279)
T PRK08508 101 SVEQLKELKKAGIFSYNHNLETSKEFFPKICTTHTWEERFQTCENAKEAGLGLCSGGIFGL 161 (279)
T ss_pred CHHHHHHHHHcCCCEEcccccchHHHhcCCCCCCCHHHHHHHHHHHHHcCCeecceeEEec
Confidence 4899999999998 333 467766665 55568999974433333333
No 208
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=31.32 E-value=79 Score=31.17 Aligned_cols=41 Identities=22% Similarity=0.258 Sum_probs=31.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEc-CCcHHHHHHHHHhcccc
Q 002656 718 KLQKGVPQCIDKLAQAGLKIWVLT-GDKMETAINIGFACSLL 758 (896)
Q Consensus 718 ~lr~~v~e~I~~L~~aGIkv~mlT-GD~~~tA~~iA~~~gi~ 758 (896)
.+-++|+++++.|++.|+++.+.| -|.++.|..+-..+++.
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 567999999999999999999999 58899999999888887
No 209
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=30.35 E-value=23 Score=35.16 Aligned_cols=15 Identities=33% Similarity=0.388 Sum_probs=13.1
Q ss_pred EEecCCCcccccceE
Q 002656 418 ILSDKTGTLTCNQMD 432 (896)
Q Consensus 418 i~~DKTGTLT~n~m~ 432 (896)
+|||.+||||.+.+.
T Consensus 1 v~fD~DGTL~~~~~~ 15 (192)
T PF12710_consen 1 VIFDFDGTLTDSDSG 15 (192)
T ss_dssp EEEESBTTTBSSHHH
T ss_pred eEEecCcCeecCCCc
Confidence 699999999999843
No 210
>PRK10444 UMP phosphatase; Provisional
Probab=29.97 E-value=3.5e+02 Score=28.43 Aligned_cols=24 Identities=21% Similarity=0.284 Sum_probs=20.7
Q ss_pred CCEEEEEcCCh-hhHHHHHHCCccE
Q 002656 861 GKTTLAIGDGA-NDVGMIQEADIGI 884 (896)
Q Consensus 861 g~~vl~iGDG~-ND~~~L~~AdVGI 884 (896)
...++||||.. +|..+=+.|++--
T Consensus 191 ~~~~v~IGD~~~tDi~~A~~~G~~~ 215 (248)
T PRK10444 191 SEETVIVGDNLRTDILAGFQAGLET 215 (248)
T ss_pred cccEEEECCCcHHHHHHHHHcCCCE
Confidence 46799999997 8999999988865
No 211
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=28.89 E-value=68 Score=28.44 Aligned_cols=44 Identities=25% Similarity=0.387 Sum_probs=28.8
Q ss_pred chhhhccceEEEEeCCCeEEEeecccCccCcEEEeccCCcCCceEEEEe
Q 002656 130 QDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLS 178 (896)
Q Consensus 130 ~~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~~lL~ 178 (896)
+........|.+ ||+.. .++.++++||+|.|.-|... -...||.
T Consensus 27 Ak~~~~~GrV~v---NG~~a-KpS~~VK~GD~l~i~~~~~~-~~v~Vl~ 70 (100)
T COG1188 27 AKEMIEGGRVKV---NGQRA-KPSKEVKVGDILTIRFGNKE-FTVKVLA 70 (100)
T ss_pred HHHHHHCCeEEE---CCEEc-ccccccCCCCEEEEEeCCcE-EEEEEEe
Confidence 334445566666 45544 89999999999999877643 2334443
No 212
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=28.59 E-value=1.7e+02 Score=26.51 Aligned_cols=81 Identities=17% Similarity=0.239 Sum_probs=55.1
Q ss_pred HHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHhhhcccEEEEeeeeccccCCChHHHHHHHH
Q 002656 652 NEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLA 731 (896)
Q Consensus 652 ~~~~~~G~r~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~ 731 (896)
.-+...|++|+.+.. .++.+++.+. -.+.+-.++|+......--+.+++.++.+|
T Consensus 21 ~~l~~~G~~V~~lg~-~~~~~~l~~~------------------------~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~ 75 (119)
T cd02067 21 RALRDAGFEVIDLGV-DVPPEEIVEA------------------------AKEEDADAIGLSGLLTTHMTLMKEVIEELK 75 (119)
T ss_pred HHHHHCCCEEEECCC-CCCHHHHHHH------------------------HHHcCCCEEEEeccccccHHHHHHHHHHHH
Confidence 355679999988773 3555443221 124567788888887777799999999999
Q ss_pred HcCC-eE-EEEcCCcHHHHHHHHHhccc
Q 002656 732 QAGL-KI-WVLTGDKMETAINIGFACSL 757 (896)
Q Consensus 732 ~aGI-kv-~mlTGD~~~tA~~iA~~~gi 757 (896)
+.+- ++ +++-|-.....-..+++.|.
T Consensus 76 ~~~~~~~~i~vGG~~~~~~~~~~~~~G~ 103 (119)
T cd02067 76 EAGLDDIPVLVGGAIVTRDFKFLKEIGV 103 (119)
T ss_pred HcCCCCCeEEEECCCCChhHHHHHHcCC
Confidence 9976 44 56677544332456777775
No 213
>PTZ00413 lipoate synthase; Provisional
Probab=26.59 E-value=3.6e+02 Score=30.34 Aligned_cols=54 Identities=24% Similarity=0.330 Sum_probs=39.3
Q ss_pred hcccEEEEeeee-ccccCCC----hHHHHHHHHHc--CCeEEEEcCCc--HHHHHHHHHhccc
Q 002656 704 EKDLILVGATAV-EDKLQKG----VPQCIDKLAQA--GLKIWVLTGDK--METAINIGFACSL 757 (896)
Q Consensus 704 E~dl~llG~~~i-~D~lr~~----v~e~I~~L~~a--GIkv~mlTGD~--~~tA~~iA~~~gi 757 (896)
+.++.++=++.. +|.|.++ ..++|+.+|+. ++.|.+++||- ..-++..-+++|+
T Consensus 191 ~~Gl~~~VVTSv~RDDL~D~ga~~~a~~I~~Ir~~~p~~~IevligDf~g~~e~l~~L~eAG~ 253 (398)
T PTZ00413 191 EMGVDYIVMTMVDRDDLPDGGASHVARCVELIKESNPELLLEALVGDFHGDLKSVEKLANSPL 253 (398)
T ss_pred HcCCCEEEEEEEcCCCCChhhHHHHHHHHHHHHccCCCCeEEEcCCccccCHHHHHHHHhcCC
Confidence 456777777777 5878665 56899999985 79999999987 3445555556665
No 214
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=25.59 E-value=1.2e+02 Score=31.58 Aligned_cols=47 Identities=17% Similarity=0.176 Sum_probs=34.4
Q ss_pred EeeeeccccCCChHHHHHHHHHcCCeEEEEc---CCcHHHHHHHHHh-ccc
Q 002656 711 GATAVEDKLQKGVPQCIDKLAQAGLKIWVLT---GDKMETAINIGFA-CSL 757 (896)
Q Consensus 711 G~~~i~D~lr~~v~e~I~~L~~aGIkv~mlT---GD~~~tA~~iA~~-~gi 757 (896)
|++.-.+.+=+++.++|..|++.|++++++| |.........-.+ .|+
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~ 57 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGV 57 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCC
Confidence 5555556667899999999999999999999 5555554443344 554
No 215
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=24.75 E-value=37 Score=28.99 Aligned_cols=27 Identities=22% Similarity=0.243 Sum_probs=18.1
Q ss_pred eecccCccCcEEEe-ccCCcCCceEEEE
Q 002656 151 KPWEKIQVGDIVKV-EKDQFFPADLLFL 177 (896)
Q Consensus 151 i~~~~L~vGDII~l-~~ge~vPaD~~lL 177 (896)
+.-.+|.+||.|.| +.||.||-=.-++
T Consensus 45 i~~~~i~~Gd~V~V~raGdVIP~I~~vv 72 (82)
T PF03120_consen 45 IKELDIRIGDTVLVTRAGDVIPKIVGVV 72 (82)
T ss_dssp HHHTT-BBT-EEEEEEETTTEEEEEEE-
T ss_pred HHHcCCCCCCEEEEEECCCccceEeEee
Confidence 44579999999887 5899999644433
No 216
>TIGR00676 fadh2 5,10-methylenetetrahydrofolate reductase, prokaryotic form. This protein is an FAD-containing flavoprotein.
Probab=23.86 E-value=2.9e+02 Score=29.55 Aligned_cols=83 Identities=16% Similarity=0.230 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHhh-hcccEEEEeeeeccccCCC
Q 002656 644 EEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMM-EKDLILVGATAVEDKLQKG 722 (896)
Q Consensus 644 ~~~~~~~~~~~~~~G~r~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~i-E~dl~llG~~~i~D~lr~~ 722 (896)
.+.+.+.++.+...|---+.+++-... ..|...++...... +.++..+--+...|.=+.+
T Consensus 14 ~~~l~~~~~~l~~~~pd~isvT~~~~~-------------------~~~~~t~~~a~~l~~~~g~~~i~Hlt~r~~n~~~ 74 (272)
T TIGR00676 14 EENLWETVDRLSPLDPDFVSVTYGAGG-------------------STRDRTVRIVRRIKKETGIPTVPHLTCIGATREE 74 (272)
T ss_pred HHHHHHHHHHHhcCCCCEEEeccCCCC-------------------CcHHHHHHHHHHHHHhcCCCeeEEeeecCCCHHH
Confidence 356666677776655555666654331 22333333333222 2377888888888988888
Q ss_pred hHHHHHHHHHcCCe-EEEEcCCcH
Q 002656 723 VPQCIDKLAQAGLK-IWVLTGDKM 745 (896)
Q Consensus 723 v~e~I~~L~~aGIk-v~mlTGD~~ 745 (896)
..+.+..++.+||+ +..||||..
T Consensus 75 l~~~L~~~~~~Gi~nvL~l~GD~~ 98 (272)
T TIGR00676 75 IREILREYRELGIRHILALRGDPP 98 (272)
T ss_pred HHHHHHHHHHCCCCEEEEeCCCCC
Confidence 99999999999996 556999998
No 217
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=23.74 E-value=4.1e+02 Score=33.79 Aligned_cols=26 Identities=8% Similarity=0.133 Sum_probs=21.0
Q ss_pred cHHHHHHHHHHHHhcCCeEEEEEEEe
Q 002656 643 YEEATTKLLNEYGEAGLRTLALAYKQ 668 (896)
Q Consensus 643 ~~~~~~~~~~~~~~~G~r~l~~A~k~ 668 (896)
.++...+.++.+...|.++.++.-..
T Consensus 529 ~r~~~~~~i~~l~~~Gi~v~miTGD~ 554 (884)
T TIGR01522 529 PRPGVKEAVTTLITGGVRIIMITGDS 554 (884)
T ss_pred chhHHHHHHHHHHHCCCeEEEECCCC
Confidence 67778888999999999988877543
No 218
>PF02261 Asp_decarbox: Aspartate decarboxylase; InterPro: IPR003190 Decarboxylation of aspartate is the major route of alanine production in bacteria, and is catalysed by the enzyme aspartate decarboxylase. The enzyme is translated as an inactive proenzyme of two chains, A and B. This family contains both chains of aspartate decarboxylase.; GO: 0004068 aspartate 1-decarboxylase activity, 0006523 alanine biosynthetic process; PDB: 1PYU_C 1AW8_A 1PYQ_B 3TM7_C 1PT1_A 1PQH_A 1PPY_B 1PT0_B 1PQF_A 1PQE_A ....
Probab=23.43 E-value=46 Score=30.22 Aligned_cols=84 Identities=20% Similarity=0.350 Sum_probs=47.9
Q ss_pred eEEecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEeeeecCCCCCeeEEEEEEcCCCcEEEEEc
Q 002656 547 LTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCK 626 (896)
Q Consensus 547 ~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~K 626 (896)
+.|.++=-.+..|+++|.-. .|+.+.+..-++--+..+.++..+.|.-.+..-
T Consensus 20 L~Y~GSitID~~Ll~aagi~---------------------------p~E~V~V~Nv~nG~Rf~TYvI~g~~GSg~I~lN 72 (116)
T PF02261_consen 20 LNYEGSITIDEDLLDAAGIL---------------------------PYEQVQVVNVNNGERFETYVIPGERGSGVICLN 72 (116)
T ss_dssp TTSTSCEEEEHHHHHHCT-----------------------------TTBEEEEEETTT--EEEEEEEEESTTTT-EEEE
T ss_pred cccceeeEECHHHHHHcCCC---------------------------cCCEEEEEECCCCcEEEEEEEEccCCCcEEEEC
Confidence 44555555777788776533 233333444444445555555656665566666
Q ss_pred ccchhhhHhhhccccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHH
Q 002656 627 GADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNS 679 (896)
Q Consensus 627 Ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~A~k~l~~~e~~~~~~ 679 (896)
||.. ++.+.|=+++.+||..++++|...|+-
T Consensus 73 GaAA----------------------rl~~~GD~vII~sy~~~~~~e~~~~~P 103 (116)
T PF02261_consen 73 GAAA----------------------RLVQVGDRVIIMSYAQVDEEEAKNHKP 103 (116)
T ss_dssp GGGG----------------------GCS-TT-EEEEEEEEEEEHHHHHH---
T ss_pred CHHH----------------------hccCCCCEEEEEEcccCCHHHHhhCCC
Confidence 7642 334578899999999999998877643
No 219
>PRK09545 znuA high-affinity zinc transporter periplasmic component; Reviewed
Probab=23.30 E-value=4.3e+02 Score=28.90 Aligned_cols=52 Identities=13% Similarity=0.119 Sum_probs=41.4
Q ss_pred ccEEEEeeeeccccCCChH---HHHHHHHHcCCeEEEE-cCCcHHHHHHHHHhccc
Q 002656 706 DLILVGATAVEDKLQKGVP---QCIDKLAQAGLKIWVL-TGDKMETAINIGFACSL 757 (896)
Q Consensus 706 dl~llG~~~i~D~lr~~v~---e~I~~L~~aGIkv~ml-TGD~~~tA~~iA~~~gi 757 (896)
+|..+|.+.+...-.+..+ ++++.+++.+|++++. ..-+..++..+|+++|.
T Consensus 221 gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~la~e~g~ 276 (311)
T PRK09545 221 GLTPLGHFTVNPEIQPGAQRLHEIRTQLVEQKATCVFAEPQFRPAVIESVAKGTSV 276 (311)
T ss_pred CCceeeeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEecCCCChHHHHHHHHhcCC
Confidence 6777888777665555544 6899999999998875 66678899999999986
No 220
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=23.29 E-value=50 Score=25.65 Aligned_cols=13 Identities=23% Similarity=0.572 Sum_probs=11.0
Q ss_pred ccCcEEEeccCCc
Q 002656 157 QVGDIVKVEKDQF 169 (896)
Q Consensus 157 ~vGDII~l~~ge~ 169 (896)
.+||||+|+.|-.
T Consensus 2 ~~GDvV~LKSGGp 14 (53)
T PF09926_consen 2 KIGDVVQLKSGGP 14 (53)
T ss_pred CCCCEEEEccCCC
Confidence 5899999998864
No 221
>PRK04980 hypothetical protein; Provisional
Probab=22.98 E-value=1.4e+02 Score=26.73 Aligned_cols=53 Identities=17% Similarity=0.174 Sum_probs=33.5
Q ss_pred cccCccCcEEEec--cCCcCCceEEEEeecCCC-ceEEEEeccCCCCCcceeeccc
Q 002656 153 WEKIQVGDIVKVE--KDQFFPADLLFLSSSYED-GICYVETMNLDGETNLKVKRAM 205 (896)
Q Consensus 153 ~~~L~vGDII~l~--~ge~vPaD~~lL~ss~~~-G~~~Vdes~LtGEs~~~~K~~~ 205 (896)
+...+|||++.|. .+...-|++.+++-.-.. +.+.=+.+...|+|-+.-|..+
T Consensus 29 e~~~~~G~~~~V~~~e~g~~~c~ieI~sV~~i~f~eLte~hA~qEg~sL~elk~~i 84 (102)
T PRK04980 29 ESHFKPGDVLRVGTFEDDRYFCTIEVLSVSPVTFDELNEKHAEQENMTLPELKQVI 84 (102)
T ss_pred ccCCCCCCEEEEEECCCCcEEEEEEEEEEEEEehhhCCHHHHHHhCCCHHHHHHHH
Confidence 5789999999997 888889999999854200 0011112445566555544443
No 222
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=22.85 E-value=4.7e+02 Score=27.36 Aligned_cols=29 Identities=17% Similarity=0.308 Sum_probs=25.8
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCcHHH
Q 002656 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMET 747 (896)
Q Consensus 719 lr~~v~e~I~~L~~aGIkv~mlTGD~~~t 747 (896)
+=+|+.|.++...+.|.+|.-+|-...++
T Consensus 123 ~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~ 151 (274)
T COG2503 123 AVPGAVEFLNYVNSNGGKIFYISNRDQEN 151 (274)
T ss_pred cCccHHHHHHHHHhcCcEEEEEeccchhc
Confidence 34899999999999999999999988776
No 223
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=22.68 E-value=6.2e+02 Score=25.21 Aligned_cols=39 Identities=15% Similarity=0.088 Sum_probs=28.1
Q ss_pred cCCChHHHHHHHHHcCCeE--EEEcCCcHHHHHHHHHhcccc
Q 002656 719 LQKGVPQCIDKLAQAGLKI--WVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 719 lr~~v~e~I~~L~~aGIkv--~mlTGD~~~tA~~iA~~~gi~ 758 (896)
.||...-....+++.|++. ++.=||+. .-+..|+++|+-
T Consensus 130 ~KP~~~~~~~~~~~~~~~~~~~l~igD~~-~Di~aA~~~Gi~ 170 (205)
T TIGR01454 130 PKPAPDIVREALRLLDVPPEDAVMVGDAV-TDLASARAAGTA 170 (205)
T ss_pred CCCChHHHHHHHHHcCCChhheEEEcCCH-HHHHHHHHcCCe
Confidence 4555545555566778753 68889985 788999999985
No 224
>PF02219 MTHFR: Methylenetetrahydrofolate reductase; InterPro: IPR003171 This family includes the 5,10-methylenetetrahydrofolate reductase 1.7.99.5 from EC from bacteria and methylenetetrahydrofolate reductase 1.5.1.20 from EC from eukaryotes. The structure for this domain is known [] to be a TIM barrel.; GO: 0004489 methylenetetrahydrofolate reductase (NADPH) activity, 0006555 methionine metabolic process, 0055114 oxidation-reduction process; PDB: 3IJD_B 1B5T_B 3FSU_C 1ZPT_C 2FMO_B 3FST_C 2FMN_C 1ZP3_A 1ZP4_B 1ZRQ_B ....
Probab=22.27 E-value=2.2e+02 Score=30.68 Aligned_cols=44 Identities=18% Similarity=0.237 Sum_probs=34.2
Q ss_pred hcccEEEEeeeeccccCCChHHHHHHHHHcCC-eEEEEcCCcHHH
Q 002656 704 EKDLILVGATAVEDKLQKGVPQCIDKLAQAGL-KIWVLTGDKMET 747 (896)
Q Consensus 704 E~dl~llG~~~i~D~lr~~v~e~I~~L~~aGI-kv~mlTGD~~~t 747 (896)
+.++..+--+..+|.=+.+....+..++.+|| .|.+||||.+..
T Consensus 68 ~~g~~~i~Hlt~rd~n~~~l~~~L~~~~~~Gi~niL~l~GD~~~~ 112 (287)
T PF02219_consen 68 ETGIEPIPHLTCRDRNREALQSDLLGAHALGIRNILALTGDPPKG 112 (287)
T ss_dssp HTT--EEEEEESTTSBHHHHHHHHHHHHHTT--EEEEESS-TSTT
T ss_pred HhCCceEEeecccCCCHHHHHHHHHHHHHcCCCeEEEecCCCCCC
Confidence 35788899999999888889999999999999 688999997643
No 225
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=21.70 E-value=1.1e+03 Score=30.69 Aligned_cols=171 Identities=13% Similarity=0.137 Sum_probs=85.6
Q ss_pred HHHHHhhhHHHHHHHHHH-HHhcccCCCCCCcccccchhhhhhHHHHHHHHHHHHHhcchhhh-----cc--ceEEEEe-
Q 002656 73 ALFEQFNRVANIYFLIAA-LLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDKEV-----NA--RKVSVHV- 143 (896)
Q Consensus 73 ~l~~~f~~~~n~~~l~~~-il~~~~~~~~~~~~~~~~l~~vl~i~~~~~~~~d~~r~k~~~~~-----n~--~~~~V~~- 143 (896)
.-|..+..+..+...++. +..+.+.++..++.-++.++++..+--..+-+..++..+..+.. .+ ....+--
T Consensus 23 ~qf~~~~N~yfl~i~ilq~ip~~s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~~~n~~~~~v~~~~~~~~~i~~~ 102 (1057)
T TIGR01652 23 EQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDKEVNNRLTEVLEGHGQFVEIPWK 102 (1057)
T ss_pred HHHHHHhhHHHHHHHHHHcCCCcCCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHhHHHHhCcEEEEECCCCcEEEeeee
Confidence 344455555445444444 33555544455444455555555666655655555554443211 11 1112211
Q ss_pred --CCCeEEEeecccCccCcEEEeccCCcCCceEEEEeecCCCceEEEEeccCCCCCc-ceeeccccc----CCCCCchhh
Q 002656 144 --GNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETN-LKVKRAMEA----TSPLNEDEA 216 (896)
Q Consensus 144 --r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~~lL~ss~~~G~~~Vdes~LtGEs~-~~~K~~~~~----~~~~~~~~~ 216 (896)
+-|....+...|.+|-|++.+...+. ....-++++.-+|....-+..-.-.+. ......... ........+
T Consensus 103 ~l~~GDiv~l~~g~~iPaD~~ll~ss~~--~g~~~v~~s~l~GEs~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~ 180 (1057)
T TIGR01652 103 DLRVGDIVKVKKDERIPADLLLLSSSEP--DGVCYVETANLDGETNLKLRQALEETQKMLDEDDIKNFSGEIECEQPNAS 180 (1057)
T ss_pred cccCCCEEEEcCCCcccceEEEEeccCC--CceEEEEeeccCCeecceEeecchhhhccCChhhHhhceEEEEEcCCCCc
Confidence 45789999999999999999986553 112345555445554332221100000 000000000 000112344
Q ss_pred hccceEEEEeeC----C-CCCceeEEEEEEEC-Ce
Q 002656 217 FKEFTGTVKCEN----P-NPSLYTFVGNIEYD-RE 245 (896)
Q Consensus 217 ~~~~~~~i~~e~----p-~~~~~~f~Gt~~~~-g~ 245 (896)
+..+.|++..+. | +.+...|.|+.+.+ |.
T Consensus 181 l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~ 215 (1057)
T TIGR01652 181 LYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDW 215 (1057)
T ss_pred ceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCe
Confidence 566888887654 1 34456789988887 44
No 226
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=21.68 E-value=9.5e+02 Score=25.22 Aligned_cols=73 Identities=14% Similarity=0.204 Sum_probs=43.4
Q ss_pred HHHHHHHHHhcCCeEEEEEEEeCCH-HHHHHHHHHHHHHHhhhccCHHHHHHHHHHhhhcccEEEEeeeeccccCCChHH
Q 002656 647 TTKLLNEYGEAGLRTLALAYKQLDE-SEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQ 725 (896)
Q Consensus 647 ~~~~~~~~~~~G~r~l~~A~k~l~~-~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e 725 (896)
..+.++.+..+|.+++.+.-+.... +++. ..|.-+|+=.=+|.+=-....
T Consensus 26 a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~-----------------------------~~l~~~g~~~~~~~i~ts~~~ 76 (257)
T TIGR01458 26 SQEAVKRLRGASVKVRFVTNTTKESKQDLL-----------------------------ERLQRLGFDISEDEVFTPAPA 76 (257)
T ss_pred HHHHHHHHHHCCCeEEEEECCCCCCHHHHH-----------------------------HHHHHcCCCCCHHHeEcHHHH
Confidence 3456778888999999888554322 1111 111122332223444445567
Q ss_pred HHHHHHHcCCeEEEEcCCcHHHH
Q 002656 726 CIDKLAQAGLKIWVLTGDKMETA 748 (896)
Q Consensus 726 ~I~~L~~aGIkv~mlTGD~~~tA 748 (896)
+...|++.|.+++++.+|.....
T Consensus 77 ~~~~l~~~~~~~~~~g~~~~~~~ 99 (257)
T TIGR01458 77 ARQLLEEKQLRPMLLVDDRVLPD 99 (257)
T ss_pred HHHHHHhcCCCeEEEECccHHHH
Confidence 77888888888888887764443
No 227
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=21.44 E-value=5.6e+02 Score=25.85 Aligned_cols=38 Identities=11% Similarity=0.202 Sum_probs=27.4
Q ss_pred CCChHHHHHHHHHcCCe---EEEEcCCcHHHHHHHHHhcccc
Q 002656 720 QKGVPQCIDKLAQAGLK---IWVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 720 r~~v~e~I~~L~~aGIk---v~mlTGD~~~tA~~iA~~~gi~ 758 (896)
||+-.-....+++.|++ -++.-||.. +-+..|+++|+-
T Consensus 145 KP~p~~~~~a~~~~~~~~~~~~~~igD~~-~Di~aa~~aG~~ 185 (220)
T TIGR03351 145 RPAPDLILRAMELTGVQDVQSVAVAGDTP-NDLEAGINAGAG 185 (220)
T ss_pred CCCHHHHHHHHHHcCCCChhHeEEeCCCH-HHHHHHHHCCCC
Confidence 45443444456667874 477889997 899999999985
No 228
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=21.34 E-value=3.5e+02 Score=29.10 Aligned_cols=53 Identities=4% Similarity=-0.068 Sum_probs=42.1
Q ss_pred ccEEEEeeeeccccCCCh---HHHHHHHHHcCCeEEEE-cCCcHHHHHHHHHhcccc
Q 002656 706 DLILVGATAVEDKLQKGV---PQCIDKLAQAGLKIWVL-TGDKMETAINIGFACSLL 758 (896)
Q Consensus 706 dl~llG~~~i~D~lr~~v---~e~I~~L~~aGIkv~ml-TGD~~~tA~~iA~~~gi~ 758 (896)
+|..+|++.+...-.+.. .++++.+++.|+++++. .+-+...+..+|+++|+-
T Consensus 195 Gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~ia~~~gv~ 251 (287)
T cd01137 195 GLKEAYLWPINTEEEGTPKQVATLIEQVKKEKVPAVFVESTVNDRLMKQVAKETGAK 251 (287)
T ss_pred CCeEeecccCCCCCCCCHHHHHHHHHHHHHhCCCEEEEeCCCChHHHHHHHHHhCCc
Confidence 788889888765555554 58888999999997765 666778899999999973
No 229
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=21.30 E-value=4.9e+02 Score=27.98 Aligned_cols=52 Identities=10% Similarity=0.140 Sum_probs=41.3
Q ss_pred ccEEEEeeeeccccCCC---hHHHHHHHHHcCCeEEEE-cCCcHHHHHHHHHhccc
Q 002656 706 DLILVGATAVEDKLQKG---VPQCIDKLAQAGLKIWVL-TGDKMETAINIGFACSL 757 (896)
Q Consensus 706 dl~llG~~~i~D~lr~~---v~e~I~~L~~aGIkv~ml-TGD~~~tA~~iA~~~gi 757 (896)
+|..++++++...-.+. +.++++.+++.++++++. ++-+..++..||++.|+
T Consensus 197 gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~ia~~~g~ 252 (286)
T cd01019 197 GLTQAGVFTIDPEIDPGAKRLAKIRKEIKEKGATCVFAEPQFHPKIAETLAEGTGA 252 (286)
T ss_pred CCceeeeecCCCCCCCCHHHHHHHHHHHHHcCCcEEEecCCCChHHHHHHHHhcCc
Confidence 67778887776554444 448899999999998776 77788999999999986
No 230
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=20.97 E-value=2e+02 Score=25.07 Aligned_cols=28 Identities=18% Similarity=0.340 Sum_probs=21.3
Q ss_pred eeeeccccCCChHHHHHHHHHcCCe-EEE
Q 002656 712 ATAVEDKLQKGVPQCIDKLAQAGLK-IWV 739 (896)
Q Consensus 712 ~~~i~D~lr~~v~e~I~~L~~aGIk-v~m 739 (896)
.+++.....|.+.++++.|++.|++ |++
T Consensus 36 ~~a~~~~~~P~i~~~l~~l~~~g~~~vvv 64 (101)
T cd03409 36 YVGFQSGLGPDTEEAIRELAEEGYQRVVI 64 (101)
T ss_pred EEEEECCCCCCHHHHHHHHHHcCCCeEEE
Confidence 4455555789999999999999984 444
No 231
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=20.66 E-value=1.3e+02 Score=33.28 Aligned_cols=37 Identities=19% Similarity=0.223 Sum_probs=33.9
Q ss_pred CCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhc-c
Q 002656 720 QKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFAC-S 756 (896)
Q Consensus 720 r~~v~e~I~~L~~aGIkv~mlTGD~~~tA~~iA~~~-g 756 (896)
-|+++++++.|+++|+++.++|+=....+..+...+ |
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 479999999999999999999999999999888885 5
No 232
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.
Probab=20.64 E-value=1.4e+02 Score=28.65 Aligned_cols=37 Identities=19% Similarity=0.090 Sum_probs=28.6
Q ss_pred EEEEeeeeccccCCChHHHHHHHHHcCCeEEEEcCCcH
Q 002656 708 ILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKM 745 (896)
Q Consensus 708 ~llG~~~i~D~lr~~v~e~I~~L~~aGIkv~mlTGD~~ 745 (896)
..+-++|=| -..+++.+.++.+++.|+++|+-||-..
T Consensus 63 ~gVt~SGGE-l~~~~l~~ll~~lk~~Gl~i~l~Tg~~~ 99 (147)
T TIGR02826 63 SCVLFLGGE-WNREALLSLLKIFKEKGLKTCLYTGLEP 99 (147)
T ss_pred CEEEEechh-cCHHHHHHHHHHHHHCCCCEEEECCCCC
Confidence 345666666 3446699999999999999999999543
No 233
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=20.62 E-value=4.3e+02 Score=28.27 Aligned_cols=52 Identities=8% Similarity=0.148 Sum_probs=40.8
Q ss_pred ccEEEEeeeeccccCCC---hHHHHHHHHHcCCeEEEE-cCCcHHHHHHHHHhccc
Q 002656 706 DLILVGATAVEDKLQKG---VPQCIDKLAQAGLKIWVL-TGDKMETAINIGFACSL 757 (896)
Q Consensus 706 dl~llG~~~i~D~lr~~---v~e~I~~L~~aGIkv~ml-TGD~~~tA~~iA~~~gi 757 (896)
+|..+|+.++...-.+. ..++++.+++.|+++++. .+-+..++..+|+++|+
T Consensus 189 gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~la~~~g~ 244 (282)
T cd01017 189 GLKQIAIVGVSPEVEPSPKQLAELVEFVKKSDVKYIFFEENASSKIAETLAKETGA 244 (282)
T ss_pred CCeEEecccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHcCC
Confidence 77788887775444444 458888999999998776 67777889999999986
No 234
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=20.60 E-value=2.5e+02 Score=35.71 Aligned_cols=119 Identities=13% Similarity=0.156 Sum_probs=71.3
Q ss_pred HHHHHHhh-hHHHHHHHHHHHHhcccCCCCCCc-------ccccchhhhhhHHHHHHHHHHHHHhcchhhhccceEEEEe
Q 002656 72 KALFEQFN-RVANIYFLIAALLSVTPLSPFSPV-------SMLLPLAIVVGVSMAKEALEDWRRFMQDKEVNARKVSVHV 143 (896)
Q Consensus 72 ~~l~~~f~-~~~n~~~l~~~il~~~~~~~~~~~-------~~~~~l~~vl~i~~~~~~~~d~~r~k~~~~~n~~~~~V~~ 143 (896)
..+|..|. .+.+.+.++..+..++.+....+. ..+.-.++++++..+...+..++..++.+.+..-+-.+-
T Consensus 69 ~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~- 147 (903)
T PRK15122 69 PHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVR- 147 (903)
T ss_pred CCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-
Confidence 34666654 455555555555554422111111 023445556677778889999999999988886653222
Q ss_pred CCCeEEEeeccc--CccCcEEEeccCCcCCceEEEEeecCCCceEEEEeccCCCCC
Q 002656 144 GNGVFSYKPWEK--IQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGET 197 (896)
Q Consensus 144 r~g~~~~i~~~~--L~vGDII~l~~ge~vPaD~~lL~ss~~~G~~~Vdes~LtGEs 197 (896)
....+-... -.-|....|...|.+|=|.++|+.. ..+-+|=-.+.|+.
T Consensus 148 ---~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~G---d~IPaDg~li~g~~ 197 (903)
T PRK15122 148 ---TTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAG---DMIPADVRLIESRD 197 (903)
T ss_pred ---CceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCC---CEEeeeEEEEEcCc
Confidence 122332221 0125789999999999999999855 34556665666654
No 235
>PRK11507 ribosome-associated protein; Provisional
Probab=20.53 E-value=96 Score=25.63 Aligned_cols=23 Identities=22% Similarity=0.244 Sum_probs=19.8
Q ss_pred CCCeEEEeecccCccCcEEEecc
Q 002656 144 GNGVFSYKPWEKIQVGDIVKVEK 166 (896)
Q Consensus 144 r~g~~~~i~~~~L~vGDII~l~~ 166 (896)
-||+.+.-.-..|.+||+|.+..
T Consensus 41 VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 41 VDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred ECCEEecccCCCCCCCCEEEECC
Confidence 47888888899999999999854
No 236
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=20.48 E-value=1.1e+02 Score=24.75 Aligned_cols=37 Identities=16% Similarity=0.203 Sum_probs=29.0
Q ss_pred eeeccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHH
Q 002656 280 VMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLIS 316 (896)
Q Consensus 280 ~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~ii~~~i~ 316 (896)
.+.|.-..+.+++.+.+.++.+...+.+++++.++++
T Consensus 33 ~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 33 YGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp HSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred cccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 4666667777889999999999888887777776653
No 237
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=20.21 E-value=2.4e+02 Score=26.55 Aligned_cols=82 Identities=17% Similarity=0.166 Sum_probs=56.8
Q ss_pred HHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHhhhcccEEEEeeeeccccCCChHHHHHHHH
Q 002656 652 NEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLA 731 (896)
Q Consensus 652 ~~~~~~G~r~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~ 731 (896)
.-|...|+.|+-.... .+.+++- ....|.+-.++|+-++-...-+.++++++.|+
T Consensus 24 ~~l~~~GfeVi~lg~~-~s~e~~v------------------------~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~ 78 (132)
T TIGR00640 24 TAYADLGFDVDVGPLF-QTPEEIA------------------------RQAVEADVHVVGVSSLAGGHLTLVPALRKELD 78 (132)
T ss_pred HHHHhCCcEEEECCCC-CCHHHHH------------------------HHHHHcCCCEEEEcCchhhhHHHHHHHHHHHH
Confidence 3567799999987754 3333321 12335688899999999988899999999999
Q ss_pred HcCC-eE-EEEcCCcHHHHHHHHHhcccc
Q 002656 732 QAGL-KI-WVLTGDKMETAINIGFACSLL 758 (896)
Q Consensus 732 ~aGI-kv-~mlTGD~~~tA~~iA~~~gi~ 758 (896)
++|. .+ +|+=|-.+..-..-.+++|+.
T Consensus 79 ~~g~~~i~vivGG~~~~~~~~~l~~~Gvd 107 (132)
T TIGR00640 79 KLGRPDILVVVGGVIPPQDFDELKEMGVA 107 (132)
T ss_pred hcCCCCCEEEEeCCCChHhHHHHHHCCCC
Confidence 9987 44 455444444334557778874
Done!