Query 002656
Match_columns 896
No_of_seqs 232 out of 2221
Neff 8.6
Searched_HMMs 29240
Date Tue Mar 26 22:13:45 2013
Command hhsearch -i /local_scratch/syshi/lefta3m2/002656.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H2_58-62//hhsearch_pdb/002656hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2zxe_A Na, K-ATPase alpha subu 1.0 1 1 809.0 35.9 647 47-896 73-752 (1028)
2 3ar4_A Sarcoplasmic/endoplasmi 1.0 1 1 791.4 45.3 672 46-896 29-733 (995)
3 3ixz_A Potassium-transporting 1.0 1 1 789.7 51.9 648 47-896 78-757 (1034)
4 1mhs_A Proton pump, plasma mem 1.0 1 1 740.6 29.2 560 47-896 93-663 (920)
5 3b8c_A ATPase 2, plasma membra 1.0 1 1 733.4 -8.3 568 46-896 37-617 (885)
6 3rfu_A Copper efflux ATPase; a 1.0 1 1 558.4 33.1 452 108-895 190-652 (736)
7 3j09_A COPA, copper-exporting 1.0 1 1 551.3 36.7 447 107-895 175-632 (723)
8 3j08_A COPA, copper-exporting 1.0 1 1 543.7 38.3 447 107-895 97-554 (645)
9 2yj3_A Copper-transporting ATP 1.0 1 1 189.3 0.0 101 706-887 124-224 (263)
10 3gwi_A Magnesium-transporting 1.0 1 1 153.4 4.2 141 525-719 17-166 (170)
No 1
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=1.00 E-value=1 Score=808.98 Aligned_cols=647 Identities=22% Similarity=0.254 Sum_probs=498.2
Q ss_pred CCCCCCCCCCCEEECCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--C---C----CCCCCCCCCHHHHHHHH
Q ss_conf 776888789952214453-025424899999966678999999998722337--8---8----88743332120365699
Q 002656 47 HKKRPLKYCTNYISTTKY-NFFSYFPKALFEQFNRVANIYFLIAALLSVTPL--S---P----FSPVSMLLPLAIVVGVS 116 (896)
Q Consensus 47 ~~~~~~~~g~N~i~~~k~-~~~~flp~~l~~qf~~~~n~~fl~i~il~~~~~--s---~----~~~~~~~~~l~~v~~i~ 116 (896)
...|+.+||.|.+..++. ++| +.|++||.+|++++++++++++++.. . . ...+...++++++++++
T Consensus 73 ~~~r~~~~G~N~l~~~~~~~~~----~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~ 148 (1028)
T 2zxe_A 73 AKEILARDGPNSLTPPPTTPEW----IKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVT 148 (1028)
T ss_dssp HHHHHHHHCCSCCCCCCCCCHH----HHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 9999986699979999999899----999999970899999999999999987511345666520079998989888899
Q ss_pred HHHHHHHHHHHHCCHHHH---CCCEEEEEECCCEEEEEECCCCCCCCEEEECCCCCCCCEEEEEEECCCCCEEEEEECCC
Q ss_conf 999999999974001232---15049999679719984145676594999415974785099973228986089971157
Q 002656 117 MAKEALEDWRRFMQDKEV---NARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNL 193 (896)
Q Consensus 117 ~~~~~~~d~~r~k~d~~~---n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPAD~iiL~ss~~~g~~~Vdes~L 193 (896)
++.+++++++..++.+.+ ...+++|+ |||++++|++++|+|||||.|++||.||||++|+++++ |+||||+|
T Consensus 149 ~~~~~~qe~ka~~~~~~L~~l~~~~a~V~-Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~----~~VdeS~L 223 (1028)
T 2zxe_A 149 GCFSYYQEAKSSRIMDSFKNMVPQQALVI-RDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHG----CKVDNSSL 223 (1028)
T ss_dssp HHHHHHHTCCCCCHHHHHHTTSCSEEEEE-ETTEEEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEEE----EEEECHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEECEEEEEEECC----EEEECCCC
T ss_conf 99999999999999999885278726999-89999999888978677799899798412289996085----89986756
Q ss_pred CCCCCCEEECCCCCCCCCCCHHHHCCCEEEEEEECCCCCCEEEEEEEEECCEEEECCCCCEEECCCEEECCCEEEEEEEE
Q ss_conf 89876255303445798996333214507999607999931689999988914304998714136065148859999999
Q 002656 194 DGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIF 273 (896)
Q Consensus 194 tGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~l~g~~~~l~~~Nil~rgs~l~nt~~~~giVi~ 273 (896)
||||.|+.|.+.... ..+++..|++++||.+.+ +++.|+|++
T Consensus 224 TGES~pv~K~~~~~~-------------------------------------~~~~~~~n~v~~GT~v~~-G~~~~~V~~ 265 (1028)
T 2zxe_A 224 TGESEPQTRSPEFSS-------------------------------------ENPLETRNIAFFSTNCVE-GTARGVVVY 265 (1028)
T ss_dssp HSCCSCEECCSSCCC-------------------------------------SSTTTCSSEECTTCEEEE-EEEEEEEEE
T ss_pred CCCCCCEECCCCCCC-------------------------------------CCCCCCCCEEEECCEEEC-CEEEEEEEE
T ss_conf 788763443467788-------------------------------------884453354873746970-169999998
Q ss_pred ECCCCCEEEC---CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 4163000003---6899997677999999999999999999999999976400115689732248889875459999865
Q 002656 274 TGHDSKVMQN---ATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLV 350 (896)
Q Consensus 274 tG~~Tk~~~~---~~~~~~k~s~~~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 350 (896)
||.+|.+++. ...++.+++++++.+++++.+++.+.++++++.++++.+.. ..|+
T Consensus 266 tG~~T~~g~i~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~~~-----~~~~----------------- 323 (1028)
T 2zxe_A 266 TGDRTVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLILG-----YSWL----------------- 323 (1028)
T ss_dssp CGGGSHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCHH-----------------
T ss_pred ECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CCHH-----------------
T ss_conf 451439889998603788788928999999999999999999999999999736-----7699-----------------
Q ss_pred HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCCC
Q ss_conf 57999999999850544310024599999999999840122344778998144136420002240499864998410031
Q 002656 351 PGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQ 430 (896)
Q Consensus 351 ~~~~~~~~~i~ll~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~I~~DKTGTLT~n~ 430 (896)
..+.+++.+++.+||++||++++++..+++.+| .++++++|+++.+|+||++++||||||||||+|+
T Consensus 324 ---~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~m----------ak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~ 390 (1028)
T 2zxe_A 324 ---EAVIFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNR 390 (1028)
T ss_dssp ---HHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSS
T ss_pred ---HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH----------HHCCCEECCCHHHHHHCCCEEEECCCCCCCCCCE
T ss_conf ---999999999999747417999999999999998----------5589164445676641476299516888888773
Q ss_pred EEEEEEEECCEECCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 28999998584036895178899998621012555432110013699973100000136899863234589753450001
Q 002656 431 MDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLM 510 (896)
Q Consensus 431 m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (896)
|.|.++++++..|.....+. . .+.
T Consensus 391 m~v~~~~~~~~~~~~~~~~~----------------------------~--------------------~~~-------- 414 (1028)
T 2zxe_A 391 MTVAHMWFDNQIHEADTTEN----------------------------Q--------------------SGA-------- 414 (1028)
T ss_dssp CEEEEEEETTEEEECCCCTT----------------------------C--------------------CSC--------
T ss_pred EEEEEEEECCEEEECCCCCC----------------------------C--------------------CCC--------
T ss_conf 89999998984651367777----------------------------6--------------------554--------
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCC--CEEEECCCHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCC
Q ss_conf 66878999847799999998420405611258999--6488508951999999999879599977298599995189999
Q 002656 511 DGNWLKEPNVDTLLLFFRILAICHTAIPELNEETG--NLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKG 588 (896)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~--~~~~~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~ 588 (896)
.....+....+++.++++||++..+...+.. ...+..++|+|.||+++++..+.....
T Consensus 415 ----~~~~~~~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~---------------- 474 (1028)
T 2zxe_A 415 ----AFDKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQG---------------- 474 (1028)
T ss_dssp ----CCCSSCHHHHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHH----------------
T ss_pred ----CCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCHHH----------------
T ss_conf ----446677899999999986578765047777766453007894099999999995898889----------------
Q ss_pred CCCEEEEEEEEEECCCCCCEEEEEEEECC---CCCEEEEECCCCHHHHHHHHCC---------CCCCHHHHHHHHHHHHH
Q ss_conf 97225999966304888970589999838---9939999746602555752016---------42119999999999985
Q 002656 589 QPVEREFKILNLLDFTSKRKRMSVIVRDE---DGQILLLCKGADSIIFDRLSKN---------GRMYEEATTKLLNEYGE 656 (896)
Q Consensus 589 ~~~~~~~~il~~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~~~ 656 (896)
....|++++.+||+|.||||+++++.+ ++++++|+||||+.|+++|+.. +++.++.+.+++++|+.
T Consensus 475 --~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~ 552 (1028)
T 2zxe_A 475 --MRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGG 552 (1028)
T ss_dssp --HHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHH
T ss_pred --HHHHCCEEEEECCCCCCCEEEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf --887482678704476666479999405788871799993882899987456533897212888999999999999985
Q ss_pred CCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCE
Q ss_conf 37808899998279889999999999987410008899999999840126179886642144678939999999975992
Q 002656 657 AGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLK 736 (896)
Q Consensus 657 ~GlR~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~agIk 736 (896)
+|+|||++|+|+++++++.++.+ .+++ ..+.+|+|++|+|+++++||+|++++++|+.|+++||+
T Consensus 553 ~G~RvL~~A~~~l~~~~~~~~~~----------~~~~-----~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~ 617 (1028)
T 2zxe_A 553 LGERVLGFCHFALPEDKYNEGYP----------FDAD-----EPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIK 617 (1028)
T ss_dssp TTCEEEEEEEEECCSTTSCTTCC----------CCTT-----TTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCE
T ss_pred CCCEEEEEEEEECCCCCCCCCCC----------CCHH-----HHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCE
T ss_conf 59979999987468221342012----------4624-----55555438099865115789984489999999986997
Q ss_pred EEEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCH
Q ss_conf 99993985778999997656333584389992589303689999999977999998566542103898774699990830
Q 002656 737 IWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKT 816 (896)
Q Consensus 737 v~ilTGD~~~tA~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~ 816 (896)
+||+|||+..||.+||++|||...+...+ . +......-.... .........+++|..
T Consensus 618 v~miTGD~~~tA~~ia~~lgi~~~~~~~i-------~------------~~~~~~~~~~~~----~~~~~~~~~vi~G~~ 674 (1028)
T 2zxe_A 618 VIMVTGDHPITAKAIAKGVGIISEGNETI-------E------------DIAARLNIPIGQ----VNPRDAKACVVHGSD 674 (1028)
T ss_dssp EEEECSSCHHHHHHHHHHHTSSCTTCCCH-------H------------HHHHHTTCCGGG----SCGGGCCEEEEEHHH
T ss_pred EEEECCCCHHHHHHHHHHCCCCCCCCHHH-------H------------HHHHHCCCCHHH----CCCCCCCEEEEECHH
T ss_conf 99988997799999999869887883367-------7------------777641863222----155566269988088
Q ss_pred HHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCEEEE--CCCCC-C
Q ss_conf 32412046999999986306905999289110999999986039998999939923099988787109971--73200-2
Q 002656 817 LAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS--GVEGM-Q 893 (896)
Q Consensus 817 l~~~l~~~~~~~~~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~ml~~AdVGIgis--g~eg~-q 893 (896)
+....++++ .++...+..++|||++|+||..+|+.+|+ .|++|+|+|||.||++||++|||||+|. |+|.. +
T Consensus 675 l~~~~~~~l----~~~~~~~~~~v~ar~~P~~K~~iV~~lq~-~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~ 749 (1028)
T 2zxe_A 675 LKDLSTEVL----DDILHYHTEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQ 749 (1028)
T ss_dssp HTTCCHHHH----HHHHHHCSEEEEESCCHHHHHHHHHHHHH-TTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHH
T ss_pred HHHCCHHHH----HHHHHHCCCEEEEECCHHHHHHHHHHHHH-CCCEEEEECCCCCHHHHHHHCCCEEEECCCCCHHHHH
T ss_conf 564799999----99986279679998588899999999996-8998999858853399998689119967765888998
Q ss_pred CCC
Q ss_conf 379
Q 002656 894 VGT 896 (896)
Q Consensus 894 aa~ 896 (896)
|||
T Consensus 750 aAD 752 (1028)
T 2zxe_A 750 AAD 752 (1028)
T ss_dssp HCS
T ss_pred HCC
T ss_conf 548
No 2
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=1.00 E-value=1 Score=791.37 Aligned_cols=672 Identities=21% Similarity=0.230 Sum_probs=488.9
Q ss_pred CCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCC-----CCCCCCCHHHHHHHHHHH
Q ss_conf 677688878995221445302542489999996667899999999872233-78888-----743332120365699999
Q 002656 46 MHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP-LSPFS-----PVSMLLPLAIVVGVSMAK 119 (896)
Q Consensus 46 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~i~il~~~~-~s~~~-----~~~~~~~l~~v~~i~~~~ 119 (896)
+...|+.+||.|.+..+++..++ +.|++||++++++++++++++++++ +.+.+ .+...+.++++++++.+.
T Consensus 29 e~~~r~~~~G~N~l~~~~~~~~~---~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i 105 (995)
T 3ar4_A 29 QVKRHLEKYGHNELPAEEGKSLW---ELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIV 105 (995)
T ss_dssp HHHHHHHHHCCSSCCCCCCCCHH---HHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSGGGSSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCCCCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999975688732898898699---999999988999999999999999886025665403478768866788999999
Q ss_pred HHHHHHHHHCCH---HHHCCCEEEEEECCCE--EEEEECCCCCCCCEEEECCCCCCCCEEEEEEECCCCCEEEEEECCCC
Q ss_conf 999999974001---2321504999967971--99841456765949994159747850999732289860899711578
Q 002656 120 EALEDWRRFMQD---KEVNARKVSVHVGNGV--FSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLD 194 (896)
Q Consensus 120 ~~~~d~~r~k~d---~~~n~~~~~V~~r~g~--~~~i~~~~L~vGDII~l~~ge~iPAD~iiL~ss~~~g~~~Vdes~Lt 194 (896)
..+.+++..++. +.+...+++|+ |+|. +++|+|++|+|||||.|++||.||||++|++.+. +.|+||||+||
T Consensus 106 ~~~qe~~a~~al~~L~~~~~~~a~V~-R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD~~ll~~~s--~~l~VdeS~LT 182 (995)
T 3ar4_A 106 GVWQERNAENAIEALKEYEPEMGKVY-RADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKS--TTLRVDQSILT 182 (995)
T ss_dssp HHHHHHHCCCHHHHHGGGSCSEEEEE-BTTCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECS--SCEEEECHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEE-ECCCCEEEEEEHHHCCCCCEEEECCCCCCCCCEEEEEEEE--CEEEEECCCCC
T ss_conf 99999999999999871089738999-3798647997899987787899889784354489998850--43999825246
Q ss_pred CCCCCEEECCCCCCCCCCCHHHHCCCEEEEEEECCCCCCEEEEEEEEECCEEEECCCCCEEECCCEEECCCEEEEEEEEE
Q ss_conf 98762553034457989963332145079996079999316899999889143049987141360651488599999994
Q 002656 195 GETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFT 274 (896)
Q Consensus 195 GEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~l~g~~~~l~~~Nil~rgs~l~nt~~~~giVi~t 274 (896)
|||.|+.|.+.+... ....+.+..|++++||.+.+ +++.|+|++|
T Consensus 183 GES~pv~K~~~~~~~----------------------------------~~~~~~~~~~~v~~GT~v~~-G~~~~~V~~t 227 (995)
T 3ar4_A 183 GESVSVIKHTEPVPD----------------------------------PRAVNQDKKNMLFSGTNIAA-GKALGIVATT 227 (995)
T ss_dssp CCCSCEEECCSCCCC----------------------------------TTCCGGGCTTEECTTCEEEE-CEEEEEEEEC
T ss_pred CCCCCEECCCCCCCC----------------------------------CCCCCCCCCCEEECCCEEEC-CEEEEEEEEC
T ss_conf 887633400456677----------------------------------66675554546761878984-4589999976
Q ss_pred CCCCCEEECC---CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC-CCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 1630000036---8999976779999999999999999999999999764001156-89732248889875459999865
Q 002656 275 GHDSKVMQNA---TTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQ-TPQWWYLKPKETDVYFNPGKPLV 350 (896)
Q Consensus 275 G~~Tk~~~~~---~~~~~k~s~~~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~ 350 (896)
|.+|++++.. ..++.+++++++.++++..++..+.++++++.++++..+.... ....|+ .
T Consensus 228 G~~T~~g~i~~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~ 291 (995)
T 3ar4_A 228 GVSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWI----------------R 291 (995)
T ss_dssp GGGSHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSSSSCHH----------------H
T ss_pred CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH----------------H
T ss_conf 722198999997325787899389999999999999999999999999998741433464079----------------9
Q ss_pred HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCCC
Q ss_conf 57999999999850544310024599999999999840122344778998144136420002240499864998410031
Q 002656 351 PGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQ 430 (896)
Q Consensus 351 ~~~~~~~~~i~ll~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~I~~DKTGTLT~n~ 430 (896)
.....|..++.+++.+||++||++++++..+++.++ .++++++|+++.+|+||++++||||||||||+|+
T Consensus 292 ~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~~~~m----------a~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~ 361 (995)
T 3ar4_A 292 GAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRM----------AKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ 361 (995)
T ss_dssp HHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCC
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH----------CCCCCEECCCHHHHHHCCCEEEEECCCCCCCCCC
T ss_conf 999999999999998667604899999999999984----------4178486134155550383399765888766585
Q ss_pred EEEEEEEECCEECCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 28999998584036895178899998621012555432110013699973100000136899863234589753450001
Q 002656 431 MDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLM 510 (896)
Q Consensus 431 m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (896)
|+|.++++.+..++..... ......+ .+..+ ......
T Consensus 362 m~v~~~~~~~~~~~~~~~~-----------------------------~~~~~~~-------~~~~p-------~~~~~~ 398 (995)
T 3ar4_A 362 MSVCKMFIIDKVDGDFCSL-----------------------------NEFSITG-------STYAP-------EGEVLK 398 (995)
T ss_dssp CEEEEEEEEEEEETTEEEE-----------------------------EEEEECC-------SSSSS-------CCCEEE
T ss_pred EEEEEEEECCCCCCCCCCC-----------------------------CEEECCC-------CCCCC-------CCCCCC
T ss_conf 6999998347556765543-----------------------------0254047-------77688-------631013
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCC
Q ss_conf 66878999847799999998420405611258999648850895199999999987959997729859999518999997
Q 002656 511 DGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQP 590 (896)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~ 590 (896)
.+........+.+.+++.++++||++....++..+ .....++|+|.|++.++++.|+ +..+... +...+........
T Consensus 399 ~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~-~~~~~g~p~E~Al~~~a~~~g~-~~~~~~~-i~~~~~~~~~~~~ 475 (995)
T 3ar4_A 399 NDKPIRSGQFDGLVELATICALCNDSSLDFNETKG-VYEKVGEATETALTTLVEKMNV-FNTEVRN-LSKVERANACNSV 475 (995)
T ss_dssp TTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTT-EEEEESCHHHHHHHHHHHHHCT-TCCCCTT-SCTTTSTTHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC-CEEECCCCCHHHHHHHHHHCCC-CCCCCCC-CCCCCCCCCCHHH
T ss_conf 66434444558999999999874888056568898-3255479647999999998399-6410001-3420101210155
Q ss_pred CEEEEEEEEEECCCCCCEEEEEEEECCCC-----CEEEEECCCCHHHHHHHHCC---------CCCCHHHHHHHHHHH--
Q ss_conf 22599996630488897058999983899-----39999746602555752016---------421199999999999--
Q 002656 591 VEREFKILNLLDFTSKRKRMSVIVRDEDG-----QILLLCKGADSIIFDRLSKN---------GRMYEEATTKLLNEY-- 654 (896)
Q Consensus 591 ~~~~~~il~~~~F~s~rkrmsviv~~~~~-----~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~-- 654 (896)
....|++++.+||+|+||||||+++.++| .+++|+||||+.|+++|+.. +++.++.+.+++++|
T Consensus 476 ~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 555 (995)
T 3ar4_A 476 IRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGT 555 (995)
T ss_dssp HHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHH
T ss_pred HHHHCCEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEEECCCHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 66417457774048888756999834898766644499975887999985405442897324999999999999998776
Q ss_pred HHCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHCC
Q ss_conf 85378088999982798899999999999874100088999999998401261798866421446789399999999759
Q 002656 655 GEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAG 734 (896)
Q Consensus 655 ~~~GlR~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~ag 734 (896)
+.+|+|||++|||+++..+. ...+ .+. ..++.+|+|++|+|+++++|++|++++++|+.|+++|
T Consensus 556 a~~GlRvLa~A~k~~~~~~~----------~~~~-~~~-----~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~G 619 (995)
T 3ar4_A 556 GRDTLRCLALATRDTPPKRE----------EMVL-DDS-----SRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAG 619 (995)
T ss_dssp STTCCEEEEEEEESSCCCGG----------GCCT-TCG-----GGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTT
T ss_pred HHCCCEEEEEEEEECCCCCC----------CCCC-CCC-----HHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHCC
T ss_conf 30561488999983476511----------1222-340-----2445530694899998525889666999999999869
Q ss_pred CEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC
Q ss_conf 92999939857789999976563335843899925893036899999999779999985665421038987746999908
Q 002656 735 LKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEG 814 (896)
Q Consensus 735 Ikv~ilTGD~~~tA~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G 814 (896)
|++||+|||+..||.++|++|||......+ . ..+++|
T Consensus 620 i~v~miTGD~~~ta~~ia~~lgi~~~~~~i------~-------------------------------------~~~~~g 656 (995)
T 3ar4_A 620 IRVIMITGDNKGTAIAICRRIGIFGENEEV------A-------------------------------------DRAYTG 656 (995)
T ss_dssp CEEEEEESSCHHHHHHHHHHHTSSCTTCCC------T-------------------------------------TTEEEH
T ss_pred CEEEEECCCCHHHHHHHHHHCCCCCCCCCC------C-------------------------------------CEEEEC
T ss_conf 989998999789999999983967788753------5-------------------------------------348983
Q ss_pred CHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCEEE-ECCCCC-
Q ss_conf 303241204699999998630690599928911099999998603999899993992309998878710997-173200-
Q 002656 815 KTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI-SGVEGM- 892 (896)
Q Consensus 815 ~~l~~~l~~~~~~~~~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~ml~~AdVGIgi-sg~eg~- 892 (896)
+.+....++++.... . +..+|||++|+||+.+|+.+|+ .|+.|+|+|||.||++||++|||||++ .|++..
T Consensus 657 ~~~~~l~~~~~~~~~----~--~~~v~~r~~P~~K~~~v~~l~~-~g~~v~~~GDG~ND~~alk~Advgiamg~g~~~ak 729 (995)
T 3ar4_A 657 REFDDLPLAEQREAC----R--RACCFARVEPSHKSKIVEYLQS-YDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAK 729 (995)
T ss_dssp HHHHTSCHHHHHHHH----H--HCCEEESCCSSHHHHHHHHHHT-TTCCEEEEECSGGGHHHHHHSTEEEEETTSCHHHH
T ss_pred HHHHHCCHHHHHHHH----H--HCCEEEEECHHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHCCEEEEECCCCHHHH
T ss_conf 664628999999987----5--3738997089999999999997-79979998388144999987896799678899999
Q ss_pred CCCC
Q ss_conf 2379
Q 002656 893 QVGT 896 (896)
Q Consensus 893 qaa~ 896 (896)
.||+
T Consensus 730 ~aAd 733 (995)
T 3ar4_A 730 TASE 733 (995)
T ss_dssp HTCS
T ss_pred HHCC
T ss_conf 7388
No 3
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=1.00 E-value=1 Score=789.72 Aligned_cols=648 Identities=19% Similarity=0.228 Sum_probs=500.0
Q ss_pred CCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CC-------CCCCCCCCCCHHHHHHHHH
Q ss_conf 77688878995221445302542489999996667899999999872233--78-------8887433321203656999
Q 002656 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP--LS-------PFSPVSMLLPLAIVVGVSM 117 (896)
Q Consensus 47 ~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~i~il~~~~--~s-------~~~~~~~~~~l~~v~~i~~ 117 (896)
..+|+.+||+|.+..++...++ +.|++||.++++++++++++++++. +. ..+.+...+++++++++++
T Consensus 78 a~~rl~~~G~N~l~~~~~~~~~---~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~ 154 (1034)
T 3ixz_A 78 AAELLLRDGPNALRPPRGTPEY---VKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTG 154 (1034)
T ss_pred HHHHHHHHCCCCCCCCCCCCHH---HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEEEHHH
T ss_conf 9999985099989998999889---9999998473899999999999999987403477765442056424301322799
Q ss_pred HHHHHHHHHHHCCHHHHCC---CEEEEEECCCEEEEEECCCCCCCCEEEECCCCCCCCEEEEEEECCCCCEEEEEECCCC
Q ss_conf 9999999997400123215---0499996797199841456765949994159747850999732289860899711578
Q 002656 118 AKEALEDWRRFMQDKEVNA---RKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLD 194 (896)
Q Consensus 118 ~~~~~~d~~r~k~d~~~n~---~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPAD~iiL~ss~~~g~~~Vdes~Lt 194 (896)
+..+++++|..++.+.+++ .+++|+ |||++++|+|++|+|||||.|+.||.||||++||++++ +.||||+||
T Consensus 155 ~~~~~qe~ka~~al~~L~~l~~~~a~Vi-RdG~~~~I~~~eLv~GDiV~l~~Gd~VPAD~~ll~~~~----l~VdES~LT 229 (1034)
T 3ixz_A 155 CFGYYQEFKSTNIIASFKNLVPQQATVI-RDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQG----RKVDNSSLT 229 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCEEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEECCCEEEEEECC----CEEEECCCC
T ss_conf 9999999999999999762489735999-99989998889879885899857964358769997088----058833667
Q ss_pred CCCCCEEECCCCCCCCCCCHHHHCCCEEEEEEECCCCCCEEEEEEEEECCEEEECCCCCEEECCCEEECCCEEEEEEEEE
Q ss_conf 98762553034457989963332145079996079999316899999889143049987141360651488599999994
Q 002656 195 GETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFT 274 (896)
Q Consensus 195 GEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~l~g~~~~l~~~Nil~rgs~l~nt~~~~giVi~t 274 (896)
|||.|+.|.+...... ........|+||.+.+|. +.|+|++|
T Consensus 230 GES~pv~K~~~~~~~~-----------------~~~~~n~~f~GT~v~~G~---------------------~~~vVv~t 271 (1034)
T 3ixz_A 230 GESEPQTRSPECTHES-----------------PLETRNIAFFSTMCLEGT---------------------AQGLVVNT 271 (1034)
T ss_pred CCCCCEECCCCCCCCC-----------------CCCCCCCEECCEEEEEEC---------------------CEEEEEEE
T ss_conf 8877766557776656-----------------323445122040698604---------------------24999960
Q ss_pred CCCCCEEEC---CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 163000003---68999976779999999999999999999999999764001156897322488898754599998655
Q 002656 275 GHDSKVMQN---ATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVP 351 (896)
Q Consensus 275 G~~Tk~~~~---~~~~~~k~s~~~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 351 (896)
|.+|.+++. ....+.+++++++.++++..++..+.++++++.++++.++.. .|
T Consensus 272 G~~T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~~------------------- 327 (1034)
T 3ixz_A 272 GDRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCIGY-----TF------------------- 327 (1034)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----HH-------------------
T ss_conf 254374089986203566789189999999999999999999999999999641-----29-------------------
Q ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCCCE
Q ss_conf 79999999998505443100245999999999998401223447789981441364200022404998649984100312
Q 002656 352 GLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQM 431 (896)
Q Consensus 352 ~~~~~~~~i~ll~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~I~~DKTGTLT~n~m 431 (896)
...|.+++.+++.+||++||++++++..+++.+| .++++++|+++.+|+||++++||||||||||+|+|
T Consensus 328 -~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~rm----------ak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m 396 (1034)
T 3ixz_A 328 -LRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRL----------ASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRM 396 (1034)
T ss_pred -HHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHH----------HHCCEEECCHHHHHHHCCCCEEECCCCCCCCCCEE
T ss_conf -9999999999882026650899999999999987----------33882864767888615872997289787236837
Q ss_pred EEEEEEECCEECCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 89999985840368951788999986210125554321100136999731000001368998632345897534500016
Q 002656 432 DFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMD 511 (896)
Q Consensus 432 ~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (896)
.|.++++++..|.....+.. + .
T Consensus 397 ~v~~~~~~~~~~~~~~~~~~---------------------------~---------------------~---------- 418 (1034)
T 3ixz_A 397 TVSHLWFDNHIHSADTTEDQ---------------------------S---------------------G---------- 418 (1034)
T ss_pred EEEEEEECCCCCCCCCCCCC---------------------------C---------------------C----------
T ss_conf 99999977951225676665---------------------------6---------------------6----------
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCC--CEEEECCCHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCC
Q ss_conf 6878999847799999998420405611258999--64885089519999999998795999772985999951899999
Q 002656 512 GNWLKEPNVDTLLLFFRILAICHTAIPELNEETG--NLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQ 589 (896)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~--~~~~~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~ 589 (896)
....+.......++.++++||++......... ......++|.|.|++.++...+.....
T Consensus 419 --~~~~~~~~~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~----------------- 479 (1034)
T 3ixz_A 419 --QTFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMG----------------- 479 (1034)
T ss_pred --CCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCHHH-----------------
T ss_conf --5567677899999999887162665357677766574355492599999999985788688-----------------
Q ss_pred CCEEEEEEEEEECCCCCCEEEEEEEECC---CCCEEEEECCCCHHHHHHHHC---------CCCCCHHHHHHHHHHHHHC
Q ss_conf 7225999966304888970589999838---993999974660255575201---------6421199999999999853
Q 002656 590 PVEREFKILNLLDFTSKRKRMSVIVRDE---DGQILLLCKGADSIIFDRLSK---------NGRMYEEATTKLLNEYGEA 657 (896)
Q Consensus 590 ~~~~~~~il~~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~---------~~~~~~~~~~~~l~~~~~~ 657 (896)
....|++++.+||+|+||||+++++.. ++.+++|+|||||.|+++|+. .+++.++.+...+.+|+.+
T Consensus 480 -~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ 558 (1034)
T 3ixz_A 480 -YRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGL 558 (1034)
T ss_pred -HHHHCCCEEEEEECCCCCEEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHC
T ss_conf -8974860699503577726899998337888608999968849999973775528964019999999999999998714
Q ss_pred CCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCEE
Q ss_conf 78088999982798899999999999874100088999999998401261798866421446789399999999759929
Q 002656 658 GLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKI 737 (896)
Q Consensus 658 GlR~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~agIkv 737 (896)
|+|||++|+|.++++++..|... ++ +..+.+|+||+|+|+++++||+|++++++|+.|+++||++
T Consensus 559 G~RvLa~A~~~l~~~~~~~~~~~----------~~-----~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~v 623 (1034)
T 3ixz_A 559 GERVLGFCQLYLSEKDYPPGYAF----------DV-----EAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRV 623 (1034)
T ss_pred CCHHHEEEEEECCHHHCCCCCCC----------CH-----HHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEE
T ss_conf 75823686785580004321124----------53-----4430222486798887136887065999999999869969
Q ss_pred EEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHH
Q ss_conf 99939857789999976563335843899925893036899999999779999985665421038987746999908303
Q 002656 738 WVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTL 817 (896)
Q Consensus 738 ~ilTGD~~~tA~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l 817 (896)
||+|||+..||.+||++|||..++...+ . +......-... ..........+++|..+
T Consensus 624 vmiTGd~~~tA~~ia~~lgi~~~~~~~i----------~---------~~~~~~~~~~~----~~~~~~~~~~~~~g~~l 680 (1034)
T 3ixz_A 624 IMVTGDHPITAKAIAASVGIISEGSETV----------E---------DIAARLRVPVD----QVNRKDARACVINGMQL 680 (1034)
T ss_pred EEEECCCHHHHHHHHHHCCCCCCCCHHH----------H---------HHHHHHCCCCH----HCCCCCCCEEEEECHHH
T ss_conf 9996997799999999869998872478----------8---------88876176500----02544543167716766
Q ss_pred HHHCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCEEEE--CCC-CCCC
Q ss_conf 2412046999999986306905999289110999999986039998999939923099988787109971--732-0023
Q 002656 818 AYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS--GVE-GMQV 894 (896)
Q Consensus 818 ~~~l~~~~~~~~~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~ml~~AdVGIgis--g~e-g~qa 894 (896)
....++++ .+....+...+|||++|+||..+|+.+|+ .|++|+|+|||.||++||++||+||+|. |.| .++|
T Consensus 681 ~~~~~~~l----~~~~~~~~~~v~ar~~P~~K~~iv~~lq~-~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~a 755 (1034)
T 3ixz_A 681 KDMDPSEL----VEALRTHPEMVFARTSPQQKLVIVESCQR-LGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNA 755 (1034)
T ss_pred HHCCHHHH----HHHHHHCCCEEEEECCHHHHHHHHHHHHH-CCCEEEEECCCHHHHHHHHHCCEEEEECCCCCHHHHHH
T ss_conf 63899999----99987378269996698999999999997-69999998795776999997893298077567999985
Q ss_pred CC
Q ss_conf 79
Q 002656 895 GT 896 (896)
Q Consensus 895 a~ 896 (896)
||
T Consensus 756 AD 757 (1034)
T 3ixz_A 756 AD 757 (1034)
T ss_pred CC
T ss_conf 49
No 4
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=1.00 E-value=1 Score=740.58 Aligned_cols=560 Identities=19% Similarity=0.231 Sum_probs=441.1
Q ss_pred CCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 77688878995221445302542489999996667899999999872233788887433321203656999999999999
Q 002656 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWR 126 (896)
Q Consensus 47 ~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~i~il~~~~~s~~~~~~~~~~l~~v~~i~~~~~~~~d~~ 126 (896)
...|+.+||.|.+..+++++| +.|++||..|++++++++++++++ .+.|.....++++++++++.+++++++
T Consensus 93 a~~r~~~~G~N~l~~~~~~~~----~~~l~~f~~~~~~ll~~aai~s~~----~g~~~~~~~i~~vv~i~~~i~~~qe~~ 164 (920)
T 1mhs_A 93 VVQRRRKYGLNQMKEEKENHF----LKFLGFFVGPIQFVMEGAAVLAAG----LEDWVDFGVICGLLLLNAVVGFVQEFQ 164 (920)
T ss_dssp HHHHHHHTSSSSCCCCCCSSH----HHHTHHHHHHHHHHHHHHHHHCTT----CSCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999639981588888899----999999987999999999999999----976899999999999999999999999
Q ss_pred HHCCHHHHCC---CEEEEEECCCEEEEEECCCCCCCCEEEECCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCEEEC
Q ss_conf 7400123215---0499996797199841456765949994159747850999732289860899711578987625530
Q 002656 127 RFMQDKEVNA---RKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKR 203 (896)
Q Consensus 127 r~k~d~~~n~---~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPAD~iiL~ss~~~g~~~Vdes~LtGEs~~~~K~ 203 (896)
..++.+.+++ .+++|+ |||++++|++++|+|||||.|++||.||||++|++++ +.+.||||+|||||.|+.|.
T Consensus 165 a~~a~~~L~~l~~~~a~V~-RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~---~~l~VDES~LTGES~PV~K~ 240 (920)
T 1mhs_A 165 AGSIVDELKKTLALKAVVL-RDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDD---AFLQVDQSALTGESLAVDKH 240 (920)
T ss_dssp HHHHHHTTTTCCCSSCEEE-CSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEES---SCCEEBCTTTSSCCCCEECC
T ss_pred HHHHHHHHHCCCCCEEEEE-ECCEEEEEEHHHCCCCCEEEECCCCCCCCCEEEEECC---CEEEEECCCCCCCCCCEEEC
T ss_conf 9999998633599879999-8998999898995889789967797336656999457---22320222247888646934
Q ss_pred CCCCCCCCCCHHHHCCCEEEEEEECCCCCCEEEEEEEEECCEEEECCCCCEEECCCEEECCCEEEEEEEEECCCCCEEEC
Q ss_conf 34457989963332145079996079999316899999889143049987141360651488599999994163000003
Q 002656 204 AMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQN 283 (896)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~l~g~~~~l~~~Nil~rgs~l~nt~~~~giVi~tG~~Tk~~~~ 283 (896)
+.+.. |+||.+.+|. +.++|++||.+|.+++.
T Consensus 241 ~gd~v---------------------------~sGT~v~~G~---------------------~~~~V~~tG~~T~~g~I 272 (920)
T 1mhs_A 241 KGDQV---------------------------FASSAVKRGE---------------------AFVVITATGDNTFVGRA 272 (920)
T ss_dssp SSCEE---------------------------CSCBCCSCCC---------------------EEEEEEECSTTCSTTTT
T ss_pred CCCEE---------------------------ECCCEEECCE---------------------EEEEEEEECCCCHHHHH
T ss_conf 79863---------------------------0376695135---------------------99999995776788899
Q ss_pred CC---CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 68---999976779999999999999999999999999764001156897322488898754599998655799999999
Q 002656 284 AT---TSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTAL 360 (896)
Q Consensus 284 ~~---~~~~k~s~~~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i 360 (896)
.. ..+.+++++++.++++..+++++.++++++.++.+.+. . ......|.+++
T Consensus 273 ~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~~~~~~-~------------------------~~~~~~l~~av 327 (920)
T 1mhs_A 273 AALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSSFYR-S------------------------NPIVQILEFTL 327 (920)
T ss_dssp TSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTT-T------------------------CCHHHHHHHHH
T ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-C------------------------CCHHHHHHHHH
T ss_conf 8877642467764999999999999999999999999998846-8------------------------86999999999
Q ss_pred HHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECC
Q ss_conf 98505443100245999999999998401223447789981441364200022404998649984100312899999858
Q 002656 361 ILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAG 440 (896)
Q Consensus 361 ~ll~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~I~~DKTGTLT~n~m~~~~~~i~~ 440 (896)
.+++.+||++||++++++..+++.++ .++++++|+++.+|.||++++||||||||||+|+|.+.+++..+
T Consensus 328 ~llV~aiP~aLp~~vti~la~g~~~m----------ak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~ 397 (920)
T 1mhs_A 328 AITIIGVPVGLPAVVTTTMAVGAAYL----------AKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVA 397 (920)
T ss_dssp HHHHHHSCCCHHHHHHHHHHHHHHHH----------HHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCS
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHH----------HHCCEEEECCCHHHHHCCCCEEEECCCCCCCCCCEEEEEEEECC
T ss_conf 99987676037777899999999999----------86883870571355543676899778887555531699985069
Q ss_pred EECCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 40368951788999986210125554321100136999731000001368998632345897534500016687899984
Q 002656 441 TAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNV 520 (896)
Q Consensus 441 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (896)
. + .+
T Consensus 398 g-~-------------------------------------------------------------------------~~-- 401 (920)
T 1mhs_A 398 G-V-------------------------------------------------------------------------DP-- 401 (920)
T ss_dssp C-C-------------------------------------------------------------------------CC--
T ss_pred C-C-------------------------------------------------------------------------CH--
T ss_conf 9-8-------------------------------------------------------------------------98--
Q ss_pred HHHHHHHHHHHHCCEEEECCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCEEEEEEEEE
Q ss_conf 77999999984204056112589996488508951999999999879599977298599995189999972259999663
Q 002656 521 DTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNL 600 (896)
Q Consensus 521 ~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~ 600 (896)
.+++.+.++|+.... . .+||.|.|+++++++.+... .....|++++.
T Consensus 402 ---~~ll~~a~l~~~~~~-----~------~~~P~e~Al~~~~~~~~~~~-------------------~~~~~~~~~~~ 448 (920)
T 1mhs_A 402 ---EDLMLTACLAASRKK-----K------GIDAIDKAFLKSLKYYPRAK-------------------SVLSKYKVLQF 448 (920)
T ss_dssp ---THHHHHHHHSCCCSS-----C------SCCSHHHHHHHHHHHSSSCC-------------------GGGSCCCEEEE
T ss_pred ---HHHHHHHHHHCCCCC-----C------CCCHHHHHHHHHHHHCCCCH-------------------HHCCCCCEEEE
T ss_conf ---999999998547766-----6------89858999999999646310-------------------10135533578
Q ss_pred ECCCCCCEEEEEEEECCCCCEEEEECCCCHHHHHHHHCC---CCCCHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHH
Q ss_conf 048889705899998389939999746602555752016---42119999999999985378088999982798899999
Q 002656 601 LDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKN---GRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAW 677 (896)
Q Consensus 601 ~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---~~~~~~~~~~~l~~~~~~GlR~l~~A~k~l~~~e~~~~ 677 (896)
+||+|.||||+++++.++|+.++|+||||+.|+++|+.. +++.++.+.+++++|+.+|+|+|++|+|..
T Consensus 449 ~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~~-------- 520 (920)
T 1mhs_A 449 HPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG-------- 520 (920)
T ss_dssp EEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCSS--------
T ss_pred EECCCCCCEEEEEEEECCCCEEEEEECCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECC--------
T ss_conf 611677885999999679918999908799999861356789878899899999999867997999998326--------
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 99999987410008899999999840126179886642144678939999999975992999939857789999976563
Q 002656 678 NSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (896)
Q Consensus 678 ~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~agIkv~ilTGD~~~tA~~ia~~~gl 757 (896)
|.+++|+|+++++||+|++++++|+.|+++||++||+|||+..||.+||+++||
T Consensus 521 --------------------------e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI 574 (920)
T 1mhs_A 521 --------------------------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGL 574 (920)
T ss_dssp --------------------------SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTS
T ss_pred --------------------------CCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCC
T ss_conf --------------------------653078899997343210179999998625744999838978999999998499
Q ss_pred CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHCCHHHHHHHHHHHHHCC
Q ss_conf 33584389992589303689999999977999998566542103898774699990830324120469999999863069
Q 002656 758 LRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECA 837 (896)
Q Consensus 758 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~ 837 (896)
..... +... ++++|. ....++++. +.. .+
T Consensus 575 ~~~~~-----~~~~--------------------------------------~~~~g~--~~~~~~el~----~~~--~~ 603 (920)
T 1mhs_A 575 GTNIY-----NAER--------------------------------------LGLGGG--GDMPGSEVY----DFV--EA 603 (920)
T ss_dssp SCSCC-----CSSS--------------------------------------SSSCBC--CCGGGGGGG----TTT--TT
T ss_pred CCCCC-----CCCC--------------------------------------EEECCC--CCCCHHHHH----HHH--HH
T ss_conf 96546-----7541--------------------------------------242276--558989999----877--51
Q ss_pred CEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCEEEE-CCCCCC-CCC
Q ss_conf 05999289110999999986039998999939923099988787109971-732002-379
Q 002656 838 SVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS-GVEGMQ-VGT 896 (896)
Q Consensus 838 ~~i~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~ml~~AdVGIgis-g~eg~q-aa~ 896 (896)
..+|+|++|+||..+|+.+|+ .|+.|+|+|||.||+|||++|||||+|. |++..+ |||
T Consensus 604 ~~V~arv~P~~K~~iV~~Lq~-~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aAD 663 (920)
T 1mhs_A 604 ADGFAEVFPQHKYNVVEILQQ-RGYLVAMTGDGVNDAPSLKKADTGIAVEGSSDAARSAAD 663 (920)
T ss_dssp TSCEESCCSTHHHHHHHHHHT-TTCCCEECCCCGGGHHHHHHSSEEEEETTSCHHHHHSSS
T ss_pred CEEEEEECHHHHHHHHHHHHH-CCCEEEEECCCCCCHHHHHHCCCCCCCCCCCHHHHHHCC
T ss_conf 819998379999999999996-799699982881009999857867405643399998468
No 5
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=1.00 E-value=1 Score=733.38 Aligned_cols=568 Identities=19% Similarity=0.214 Sum_probs=432.4
Q ss_pred CCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC----CCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 67768887899522144530254248999999666789999999987223378----88874333212036569999999
Q 002656 46 MHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLS----PFSPVSMLLPLAIVVGVSMAKEA 121 (896)
Q Consensus 46 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~fl~i~il~~~~~s----~~~~~~~~~~l~~v~~i~~~~~~ 121 (896)
+...|+..||.|.+..++++.| +.|++||.+|+++++++.++++++... +..|+. .+.++++++++.+.++
T Consensus 37 e~~~r~~~~G~N~l~~~~~~~~----~~~l~~~~~p~~~il~~aaiis~~l~~~~~~~~~~~~-~~~I~~~v~i~~~l~~ 111 (885)
T 3b8c_A 37 EGEDRIQIFGPNKLEEKKESKL----LKFLGFMWNPLSWVMEMAAIMAIALANGDGRPPDWQD-FVGIICLLVINSTISF 111 (885)
T ss_dssp HHHHHSSSCCSCCTTTTCCCTT----SSTTSCCCGGGSSHHHHHHHGGGGSSCCTTSCSCCTT-HHHHHHHTTTTTTTTT
T ss_pred HHHHHHHHCCCCCCCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH-HHHHHHHHHHHHHHHH
T ss_conf 9999998519971588788799----9999999999999999999999999704566301889-9999999999999999
Q ss_pred HHHHHHHCCHHHH---CCCEEEEEECCCEEEEEECCCCCCCCEEEECCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCC
Q ss_conf 9999974001232---1504999967971998414567659499941597478509997322898608997115789876
Q 002656 122 LEDWRRFMQDKEV---NARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETN 198 (896)
Q Consensus 122 ~~d~~r~k~d~~~---n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPAD~iiL~ss~~~g~~~Vdes~LtGEs~ 198 (896)
+++++..++.+.+ ...+++|+ |||++++|++++|+|||||.|++||.||||++|+++++ ++||||+|||||.
T Consensus 112 ~qe~ka~~al~~L~~~~~~~a~V~-RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~g~~----l~VdES~LTGES~ 186 (885)
T 3b8c_A 112 IEENNAGNAAAALMAGLAPKTKVL-RDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDP----LKVDQSALTGESL 186 (885)
T ss_dssp TTTTTTTTHHHHTTTSCSCCCCCC-CSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCCSSC----BCCCCCSTTCCSS
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEEECEEEEECCC----CCCCCCCCCCCCC
T ss_conf 999999999999733499869999-99989998989979897899889999930359997675----4003444688886
Q ss_pred CEEECCCCCCCCCCCHHHHCCCEEEEEEECCCCCCEEEEEEEEECCEEEECCCCCEEECCCEEECCCEEEEEEEEECCCC
Q ss_conf 25530344579899633321450799960799993168999998891430499871413606514885999999941630
Q 002656 199 LKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDS 278 (896)
Q Consensus 199 ~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~l~g~~~~l~~~Nil~rgs~l~nt~~~~giVi~tG~~T 278 (896)
|+.|.+.+.. |+||.+.+|. +.++|++||.+|
T Consensus 187 Pv~K~~g~~v---------------------------~~GT~v~~G~---------------------~~~~V~~tG~~T 218 (885)
T 3b8c_A 187 PVTKHPGQEV---------------------------FSGSTCKQGE---------------------IEAVVIATGVHT 218 (885)
T ss_dssp CCCBSSCCCC---------------------------CSCCCCCSCC---------------------CCCBCCSCTTTT
T ss_pred CEEECCCCCC---------------------------CCCEEEEEEE---------------------EEEEEEECCCCC
T ss_conf 4583489830---------------------------2675995117---------------------999999757301
Q ss_pred CEEECCC--CCCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 0000368--9999767799999999999999-999999999997640011568973224888987545999986557999
Q 002656 279 KVMQNAT--TSPSKRSGIEKKMDKIIFILFA-ILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAH 355 (896)
Q Consensus 279 k~~~~~~--~~~~k~s~~~~~~~~~~~~~~~-~~iil~~i~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 355 (896)
.+++..+ ....+++++++.++++..+++. +.+.++++.++.+.+.. ..|. ..
T Consensus 219 ~~g~i~~lv~~~~~~~~lq~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~--------------------~~ 273 (885)
T 3b8c_A 219 FFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQR-----RKYR--------------------DG 273 (885)
T ss_dssp TSTTCCCSCCSCSCCSTTTTTTHHHHHHHHHHHHHHHHHHSTTTTTTTC-----SCST--------------------TH
T ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CCHH--------------------HH
T ss_conf 9999999986464468499999999999999999999999999999806-----8699--------------------99
Q ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEEE
Q ss_conf 99999985054431002459999999999984012234477899814413642000224049986499841003128999
Q 002656 356 LVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLK 435 (896)
Q Consensus 356 ~~~~i~ll~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~I~~DKTGTLT~n~m~~~~ 435 (896)
+.+++.+++.+||++||++++++..+++.++ .++++++|+++.+|+||++++||||||||||+|+|.+.+
T Consensus 274 ~~~~v~llv~aiP~aLp~~vti~la~g~~r~----------ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~ 343 (885)
T 3b8c_A 274 IDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL----------SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDK 343 (885)
T ss_dssp HHHHHHHTTTTCCSSTTTHHHHTTTHHHHHH----------TTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHCCEEECCCHHHHHHHCCCEEEECCCCCCCCCCEEEEE
T ss_conf 9999999999703689999999999999999----------719869689518889767998998799876168527998
Q ss_pred EEECCEECCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99858403689517889999862101255543211001369997310000013689986323458975345000166878
Q 002656 436 CSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWL 515 (896)
Q Consensus 436 ~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (896)
+.+. .++.+
T Consensus 344 ~~~~--~~~~~--------------------------------------------------------------------- 352 (885)
T 3b8c_A 344 NLVE--VFCKG--------------------------------------------------------------------- 352 (885)
T ss_dssp CCCC--SSCSS---------------------------------------------------------------------
T ss_pred EEEE--CCCCC---------------------------------------------------------------------
T ss_conf 7775--15899---------------------------------------------------------------------
Q ss_pred CCCCHHHHHHHHHHHHHCCEEEECCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCEEEE
Q ss_conf 99984779999999842040561125899964885089519999999998795999772985999951899999722599
Q 002656 516 KEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREF 595 (896)
Q Consensus 516 ~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 595 (896)
....+++.+.++|+... ++||.|.|+++++.+.. . ....|
T Consensus 353 -----~~~~~ll~~aa~~~~~~-------------~~~p~~~Al~~~~~~~~---------~-------------~~~~~ 392 (885)
T 3b8c_A 353 -----VEKDQVLLFAAMASRVE-------------NQDAIDAAMVGMLADPK---------E-------------ARAGI 392 (885)
T ss_dssp -----TTHHHHHHHHHHHCCSS-------------SCCSHHHHHHHTTCCTT---------C-------------CCCSS
T ss_pred -----CCHHHHHHHHHHHHCCC-------------CCCCHHHHHHHHHHCHH---------H-------------HHHCC
T ss_conf -----99999999999972788-------------99915899999864636---------5-------------76248
Q ss_pred EEEEEECCCCCCEEEEEEEECCCCCEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHH
Q ss_conf 99663048889705899998389939999746602555752016421199999999999853780889999827988999
Q 002656 596 KILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYS 675 (896)
Q Consensus 596 ~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~GlR~l~~A~k~l~~~e~~ 675 (896)
++++.+||+|.||||+++++..+|+.++|+||||+.|+++|+.. ...++.+.+++++|+.+|+|+|++|+|++++++
T Consensus 393 ~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~-~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~-- 469 (885)
T 3b8c_A 393 REVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKAS-NDLSKKVLSIIDKYAERGLRSLAVARQVVPEKT-- 469 (885)
T ss_dssp CCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCC-STTTTTHHHHHHHHTTTTCEEEEECCBCCCSSS--
T ss_pred CEEECCCCCCCCCEEEEEEEECCCCEEEEEECCHHHHHHHCCCC-HHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC--
T ss_conf 32201357852256899998048968999948899999764586-445799999999998579869999994466433--
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 99999999874100088999999998401261798866421446789399999999759929999398577899999765
Q 002656 676 AWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFAC 755 (896)
Q Consensus 676 ~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~agIkv~ilTGD~~~tA~~ia~~~ 755 (896)
+ +..|++++|+|+++++||+|++++++|+.|+++||++||+|||+..||.+||+++
T Consensus 470 ----------------~--------~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~l 525 (885)
T 3b8c_A 470 ----------------K--------ESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 525 (885)
T ss_dssp ----------------S--------SCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTT
T ss_pred ----------------C--------CCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHH
T ss_conf ----------------1--------1135675799999960666120899999999769968999399869999999980
Q ss_pred CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHCCH-HHHHHHHHHHH
Q ss_conf 63335843899925893036899999999779999985665421038987746999908303241204-69999999863
Q 002656 756 SLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALED-DMKHHFLGLAV 834 (896)
Q Consensus 756 gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~-~~~~~~~~l~~ 834 (896)
||..+.. ... +++|..++..+.+ ++.+ +..
T Consensus 526 Gi~~~~~--------~~~-------------------------------------~l~g~~~~~~~~~~~l~~----~~~ 556 (885)
T 3b8c_A 526 GMGTNMY--------PSS-------------------------------------ALLGTHKDANLASIPVEE----LIE 556 (885)
T ss_dssp TCTTCCS--------TTS-------------------------------------SCCBGGGGTTSCCSCHHH----HHH
T ss_pred CCCCCCC--------CCC-------------------------------------EEECCCCCCCCCHHHHHH----HHH
T ss_conf 9764667--------751-------------------------------------445553122246357999----986
Q ss_pred HCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCEEEE-CCCCC-CCCC
Q ss_conf 06905999289110999999986039998999939923099988787109971-73200-2379
Q 002656 835 ECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS-GVEGM-QVGT 896 (896)
Q Consensus 835 ~~~~~i~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~ml~~AdVGIgis-g~eg~-qaa~ 896 (896)
+..||+|++|+||..+|+.+|+ .|+.|+|+|||.||+|||++|||||++. |++.. .|||
T Consensus 557 --~~~v~arv~P~~K~~iV~~lq~-~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aAD 617 (885)
T 3b8c_A 557 --KADGFAGVFPEHKYEIVKKLQE-RKHIVGMTGDGVNDAPALKKADIGIAVADATDAARGASD 617 (885)
T ss_dssp --TSCCEECCCHHHHHHHHHHHHH-TTCCCCBCCCSSTTHHHHHHSSSCCCCSSSHHHHGGGCS
T ss_pred --HCCEEEEECHHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHCCEEEEECCCCHHHHHHCC
T ss_conf --3868988789999999999997-799699975981229999869975995771299998434
No 6
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=1.00 E-value=1 Score=558.41 Aligned_cols=452 Identities=20% Similarity=0.251 Sum_probs=365.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCHHHHC------CCEEEEEECCCEEEEEECCCCCCCCEEEECCCCCCCCEEEEEEECC
Q ss_conf 1203656999999999999740012321------5049999679719984145676594999415974785099973228
Q 002656 108 PLAIVVGVSMAKEALEDWRRFMQDKEVN------ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSY 181 (896)
Q Consensus 108 ~l~~v~~i~~~~~~~~d~~r~k~d~~~n------~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPAD~iiL~ss~ 181 (896)
...+++++..+..+++.+.++++.+.++ ..+++|++|||++++|++++|+|||||.|++||.||||++|++
T Consensus 190 ~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~--- 266 (736)
T 3rfu_A 190 AAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQE--- 266 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEECS---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEHHHCCCCCEEEECCCCCCCCCEEEEE---
T ss_conf 99999999999999999999999999999883399889999529989998776689898899879975156379997---
Q ss_pred CCCEEEEEECCCCCCCCCEEECCCCCCCCCCCHHHHCCCEEEEEEECCCCCCEEEEEEEEECCEEEECCCCCEEECCCEE
Q ss_conf 98608997115789876255303445798996333214507999607999931689999988914304998714136065
Q 002656 182 EDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKL 261 (896)
Q Consensus 182 ~~g~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~l~g~~~~l~~~Nil~rgs~l 261 (896)
|.++||||+|||||.|+.|.+++.. |+||++.+|.
T Consensus 267 --G~~~VDES~LTGES~Pv~K~~gd~v---------------------------~~Gt~~~~G~---------------- 301 (736)
T 3rfu_A 267 --GRSFVDESMVTGEPIPVAKEASAKV---------------------------IGATINQTGS---------------- 301 (736)
T ss_dssp --SCEEEECSSSTTCSSCEEECTTCEE---------------------------CTTCEEESCC----------------
T ss_pred --CCEEEEECCCCCCCCCEEECCCCCC---------------------------CCCEEECCCE----------------
T ss_conf --8667651235786142783168867---------------------------7864861450----------------
Q ss_pred ECCCEEEEEEEEECCCCCEEE---CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCC
Q ss_conf 148859999999416300000---36899997677999999999999999999999999976400115689732248889
Q 002656 262 RNTAHVYGSVIFTGHDSKVMQ---NATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKE 338 (896)
Q Consensus 262 ~nt~~~~giVi~tG~~Tk~~~---~~~~~~~k~s~~~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~l~~~~ 338 (896)
+.+.|++||.+|.+++ +...++.+++++++..+++..+++++.++++++.+++|.++.... .|
T Consensus 302 -----~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~~~---~~------ 367 (736)
T 3rfu_A 302 -----FVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGPQP---AL------ 367 (736)
T ss_dssp -----CCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSS---ST------
T ss_pred -----EEEEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---HH------
T ss_conf -----9999998412259999999999743268979999999999999999999999999999967873---29------
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCEEEE
Q ss_conf 87545999986557999999999850544310024599999999999840122344778998144136420002240499
Q 002656 339 TDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTI 418 (896)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~I 418 (896)
...+.+++.+++.+|||+|+++++++...+..++ .++++++|+++.+|.||++++|
T Consensus 368 --------------~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~----------a~~gilvk~~~alE~l~~v~~i 423 (736)
T 3rfu_A 368 --------------SYGLIAAVSVLIIACPCALGLATPMSIMVGVGKG----------AQSGVLIKNAEALERMEKVNTL 423 (736)
T ss_dssp --------------THHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHH----------HHTTEEESCHHHHHHHTSCCEE
T ss_pred --------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHCCEEECHHHHHHHHCCCCEE
T ss_conf --------------9999998774877324278888999999999997----------5151332337899986279999
Q ss_pred EECCCCCCCCCCEEEEEEEECCEECCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 86499841003128999998584036895178899998621012555432110013699973100000136899863234
Q 002656 419 LSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRR 498 (896)
Q Consensus 419 ~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (896)
|||||||||+|+|.+.++...+.. +
T Consensus 424 ~fDKTGTLT~g~~~v~~i~~~~~~------~------------------------------------------------- 448 (736)
T 3rfu_A 424 VVDKTGTLTEGHPKLTRIVTDDFV------E------------------------------------------------- 448 (736)
T ss_dssp EECCBTTTBCSSCEEEEEEESSSC------H-------------------------------------------------
T ss_pred EEECCCCCCCCCEEEEEEEECCCC------H-------------------------------------------------
T ss_conf 981898875895279999834887------7-------------------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEECCCEE
Q ss_conf 58975345000166878999847799999998420405611258999648850895199999999987959997729859
Q 002656 499 IKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSV 578 (896)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~Alv~~a~~~g~~~~~~~~~~~ 578 (896)
.+++...+.+ ++.++||.+.|++++++..|+.+
T Consensus 449 -------------------------~~~l~~aa~l--------------e~~s~hPla~Aiv~~a~~~~~~~-------- 481 (736)
T 3rfu_A 449 -------------------------DNALALAAAL--------------EHQSEHPLANAIVHAAKEKGLSL-------- 481 (736)
T ss_dssp -------------------------HHHHHHHHHH--------------HHSSCCHHHHHHHHHHHTTCCCC--------
T ss_pred -------------------------HHHHHHHHHH--------------HHCCCCHHHHHHHHHHHHCCCCC--------
T ss_conf -------------------------8999999998--------------62289928999999999659986--------
Q ss_pred EEEECCCCCCCCCEEEEEEEEEECCCCCCEEEEEEEECCCCCEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 99951899999722599996630488897058999983899399997466025557520164211999999999998537
Q 002656 579 FIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAG 658 (896)
Q Consensus 579 ~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~G 658 (896)
....+|++.+++.. ... .+|. .+.+|+++.+.+.... .....+..++++.+|
T Consensus 482 -------------------~~~~~f~~~~g~gv-~~~-~~g~--~~~~G~~~~~~~~~~~-----~~~~~~~~~~~~~~G 533 (736)
T 3rfu_A 482 -------------------GSVEAFEAPTGKGV-VGQ-VDGH--HVAIGNARLMQEHGGD-----NAPLFEKADELRGKG 533 (736)
T ss_dssp -------------------CCCSCCCCCTTTEE-EEC-SSSS--CEEEESHHHHHHHCCC-----CHHHHHHHHHHHHTT
T ss_pred -------------------CCCCCCCCCCCCEE-EEE-ECCE--EEEECCHHHHHHCCCC-----HHHHHHHHHHHHHCC
T ss_conf -------------------67543202488658-999-9998--9997389999873997-----167899999998569
Q ss_pred CEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCEEE
Q ss_conf 80889999827988999999999998741000889999999984012617988664214467893999999997599299
Q 002656 659 LRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIW 738 (896)
Q Consensus 659 lR~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~agIkv~ 738 (896)
+|++++|+ |.+++|+++++|++|++++++|+.|+++||+++
T Consensus 534 ~~vl~va~---------------------------------------d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~ 574 (736)
T 3rfu_A 534 ASVMFMAV---------------------------------------DGKTVALLVVEDPIKSSTPETILELQQSGIEIV 574 (736)
T ss_dssp CEEEEEEE---------------------------------------TTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEE
T ss_pred CEEEEEEE---------------------------------------CCEEEEEEEEECCCHHHHHHHHHHHHHCCCEEE
T ss_conf 86999987---------------------------------------998999998503220309999999998799499
Q ss_pred EECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHH
Q ss_conf 99398577899999765633358438999258930368999999997799999856654210389877469999083032
Q 002656 739 VLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLA 818 (896)
Q Consensus 739 ilTGD~~~tA~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~ 818 (896)
|+|||+..+|..+|+++|+..
T Consensus 575 mlTGd~~~~a~~ia~~lgi~~----------------------------------------------------------- 595 (736)
T 3rfu_A 575 MLTGDSKRTAEAVAGTLGIKK----------------------------------------------------------- 595 (736)
T ss_dssp EECSSCHHHHHHHHHHHTCCC-----------------------------------------------------------
T ss_pred EECCCCHHHHHHHHHHCCCCE-----------------------------------------------------------
T ss_conf 987989899999999859987-----------------------------------------------------------
Q ss_pred HHCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCEEE-ECCCCC-CCC
Q ss_conf 41204699999998630690599928911099999998603999899993992309998878710997-173200-237
Q 002656 819 YALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI-SGVEGM-QVG 895 (896)
Q Consensus 819 ~~l~~~~~~~~~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~ml~~AdVGIgi-sg~eg~-qaa 895 (896)
++++++|+||..+|+.+|+ .|+.|+|+|||.||++||++|||||++ .|++.. .+|
T Consensus 596 ---------------------v~a~~~P~~K~~~v~~l~~-~g~~V~~vGDG~ND~paL~~AdvGIAmg~g~d~a~~~A 652 (736)
T 3rfu_A 596 ---------------------VVAEIMPEDKSRIVSELKD-KGLIVAMAGDGVNDAPALAKADIGIAMGTGTDVAIESA 652 (736)
T ss_dssp ---------------------EECSCCHHHHHHHHHHHHH-HSCCEEEEECSSTTHHHHHHSSEEEEESSSCSHHHHHC
T ss_pred ---------------------EEEECCHHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHCCEEEEECCCCHHHHHHC
T ss_conf ---------------------9970699999999999996-69989999898576999986997799478659999769
No 7
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=1.00 E-value=1 Score=551.33 Aligned_cols=447 Identities=19% Similarity=0.237 Sum_probs=355.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCHHHHC------CCEEEEEECCCEEEEEECCCCCCCCEEEECCCCCCCCEEEEEEEC
Q ss_conf 21203656999999999999740012321------504999967971998414567659499941597478509997322
Q 002656 107 LPLAIVVGVSMAKEALEDWRRFMQDKEVN------ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSS 180 (896)
Q Consensus 107 ~~l~~v~~i~~~~~~~~d~~r~k~d~~~n------~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPAD~iiL~ss 180 (896)
-...+++++..+.++++++.++++.+.++ ..+++|+ |+|++++|++++|+|||||.|++||.||||++|++
T Consensus 175 ~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~-r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~-- 251 (723)
T 3j09_A 175 ETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVI-RDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE-- 251 (723)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEE-ETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEE--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEEEEEEEEE--
T ss_conf 999999999999999999999999999988872699756999-89989998989979998999889998856799997--
Q ss_pred CCCCEEEEEECCCCCCCCCEEECCCCCCCCCCCHHHHCCCEEEEEEECCCCCCEEEEEEEEECCEEEECCCCCEEECCCE
Q ss_conf 89860899711578987625530344579899633321450799960799993168999998891430499871413606
Q 002656 181 YEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSK 260 (896)
Q Consensus 181 ~~~g~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~l~g~~~~l~~~Nil~rgs~ 260 (896)
|.|+||||+|||||.|+.|.+.+.. |+||.+.+|.
T Consensus 252 ---G~~~VdeS~LTGES~pv~K~~g~~v---------------------------~~Gt~~~~g~--------------- 286 (723)
T 3j09_A 252 ---GESYVDESMISGEPVPVLKSKGDEV---------------------------FGATINNTGV--------------- 286 (723)
T ss_dssp ---CCEEEECHHHHCCSSCEEECTTCEE---------------------------CTTCEECSSC---------------
T ss_pred ---CCEEEECCCCCCCCCCEEECCCCEE---------------------------CCCEEEECCC---------------
T ss_conf ---7768860001388764663689823---------------------------0416970672---------------
Q ss_pred EECCCEEEEEEEEECCCCC---EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCC
Q ss_conf 5148859999999416300---0003689999767799999999999999999999999997640011568973224888
Q 002656 261 LRNTAHVYGSVIFTGHDSK---VMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPK 337 (896)
Q Consensus 261 l~nt~~~~giVi~tG~~Tk---~~~~~~~~~~k~s~~~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~l~~~ 337 (896)
+.+.|++||.+|. +.++...++.+++++++.+++++.+++++.++++++.++.|.++... +|.
T Consensus 287 ------~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~----~~~---- 352 (723)
T 3j09_A 287 ------LKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHA----PLL---- 352 (723)
T ss_dssp ------EEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSSTTC----TTC----
T ss_pred ------EEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC----CHH----
T ss_conf ------999999846743999999999975346983899999999999999999999999999985688----699----
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCEEE
Q ss_conf 98754599998655799999999985054431002459999999999984012234477899814413642000224049
Q 002656 338 ETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDT 417 (896)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~ 417 (896)
..+.+++.+++..|||+|+++++++...+..++ .++++++|+++.+|.||++++
T Consensus 353 ----------------~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~----------a~~gilvk~~~~lE~lg~v~~ 406 (723)
T 3j09_A 353 ----------------FAFTTLIAVLVVACPCAFGLATPTALTVGMGKG----------AELGILIKNADALEVAEKVTA 406 (723)
T ss_dssp ----------------CSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTTCEESSTTHHHHGGGCCE
T ss_pred ----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHCCEEEECHHHHHHHHCCCE
T ss_conf ----------------999999999975026789999999999999999----------988938948289987624989
Q ss_pred EEECCCCCCCCCCEEEEEEEECCEECCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98649984100312899999858403689517889999862101255543211001369997310000013689986323
Q 002656 418 ILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKR 497 (896)
Q Consensus 418 I~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (896)
||||||||||+|+|.+.++...+.. +
T Consensus 407 i~fDKTGTLT~g~~~v~~~~~~~~~------~------------------------------------------------ 432 (723)
T 3j09_A 407 VIFDKTGTLTKGKPEVTDLVPLNGD------E------------------------------------------------ 432 (723)
T ss_dssp EEEEHHHHTSCSCCEEEEEEESSSC------H------------------------------------------------
T ss_pred EEECCCCCCCCCCEEEEEEEECCCC------H------------------------------------------------
T ss_conf 9984777552696279999807999------8------------------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEECCCE
Q ss_conf 45897534500016687899984779999999842040561125899964885089519999999998795999772985
Q 002656 498 RIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSS 577 (896)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~Alv~~a~~~g~~~~~~~~~~ 577 (896)
.+++...+.+.. .+.||++.|++++++..|+.+...
T Consensus 433 --------------------------~~~l~~aa~~e~--------------~s~hP~~~Ai~~~a~~~~~~~~~~---- 468 (723)
T 3j09_A 433 --------------------------RELLRLAAIAER--------------RSEHPIAEAIVKKALEHGIELGEP---- 468 (723)
T ss_dssp --------------------------HHHHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCSC----
T ss_pred --------------------------HHHHHHHHHHHC--------------CCCCCHHHHHHHHHHHCCCCCCCC----
T ss_conf --------------------------999999999850--------------499954289999998549985786----
Q ss_pred EEEEECCCCCCCCCEEEEEEEEEECCCCCCEEEEEEEECCCCCEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHC
Q ss_conf 99995189999972259999663048889705899998389939999746602555752016421199999999999853
Q 002656 578 VFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEA 657 (896)
Q Consensus 578 ~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~ 657 (896)
..++. ...+. +.. ..+.+|+++.+.+.. ......+..++++++.+
T Consensus 469 ---------------~~~~~--------~~g~g-~~~-------~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~ 513 (723)
T 3j09_A 469 ---------------EKVEV--------IAGEG-VVA-------DGILVGNKRLMEDFG----VAVSNEVELALEKLERE 513 (723)
T ss_dssp ---------------CCCEE--------ETTTE-EEE-------TTEEEECHHHHHHTT----CCCCHHHHHHHHHHHTT
T ss_pred ---------------CCEEE--------ECCCC-EEE-------EEEEECCHHHHHHCC----CCCCHHHHHHHHHHHHC
T ss_conf ---------------44599--------66981-699-------999977899997549----98608999999999855
Q ss_pred CCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCEE
Q ss_conf 78088999982798899999999999874100088999999998401261798866421446789399999999759929
Q 002656 658 GLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKI 737 (896)
Q Consensus 658 GlR~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~agIkv 737 (896)
|+|++++|+ |++++|+++++|++|++++++|+.|+++||++
T Consensus 514 g~~~~~va~---------------------------------------~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v 554 (723)
T 3j09_A 514 AKTAVIVAR---------------------------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKV 554 (723)
T ss_dssp TCEEEEEEE---------------------------------------TTEEEEEEEEECCSCTTHHHHHHHHHHTTCEE
T ss_pred CCEEEEEEE---------------------------------------CCEEEEEEEECCCCCHHHHHHHHHHHHCCCEE
T ss_conf 982899978---------------------------------------99999999606875256999999999779979
Q ss_pred EEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHH
Q ss_conf 99939857789999976563335843899925893036899999999779999985665421038987746999908303
Q 002656 738 WVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTL 817 (896)
Q Consensus 738 ~ilTGD~~~tA~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l 817 (896)
||+|||+..+|..+|+++|+..
T Consensus 555 ~~~TGd~~~~a~~ia~~lgi~~---------------------------------------------------------- 576 (723)
T 3j09_A 555 GMITGDNWRSAEAISRELNLDL---------------------------------------------------------- 576 (723)
T ss_dssp EEECSSCHHHHHHHHHHHTCSE----------------------------------------------------------
T ss_pred EEECCCCHHHHHHHHHHCCCCE----------------------------------------------------------
T ss_conf 9999989899999999859938----------------------------------------------------------
Q ss_pred HHHCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCEEE-ECCCCC-CCC
Q ss_conf 241204699999998630690599928911099999998603999899993992309998878710997-173200-237
Q 002656 818 AYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI-SGVEGM-QVG 895 (896)
Q Consensus 818 ~~~l~~~~~~~~~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~ml~~AdVGIgi-sg~eg~-qaa 895 (896)
++++++|+||..+|+.+++ . +.|+|+|||.||++||++|||||++ .|++.. .+|
T Consensus 577 ----------------------~~~~~~P~~K~~~v~~l~~-~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~A 632 (723)
T 3j09_A 577 ----------------------VIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESG 632 (723)
T ss_dssp ----------------------EECSCCTTCHHHHHHHHTT-T-CCEEEEECSSTTHHHHHHSSEEEECCCCSCCSSCCS
T ss_pred ----------------------EECCCCHHHHHHHHHHHHC-C-CEEEEEECCHHHHHHHHHCCEEEEECCCCHHHHHHC
T ss_conf ----------------------9926899999999999834-9-939999898230999954998799678759999869
No 8
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=1.00 E-value=1 Score=543.74 Aligned_cols=447 Identities=19% Similarity=0.238 Sum_probs=355.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCHHHH------CCCEEEEEECCCEEEEEECCCCCCCCEEEECCCCCCCCEEEEEEEC
Q ss_conf 2120365699999999999974001232------1504999967971998414567659499941597478509997322
Q 002656 107 LPLAIVVGVSMAKEALEDWRRFMQDKEV------NARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSS 180 (896)
Q Consensus 107 ~~l~~v~~i~~~~~~~~d~~r~k~d~~~------n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPAD~iiL~ss 180 (896)
-...+++++..+.++++++.++++.+.+ ...+++|+ |+|++++|++++|+|||||.|++||.||||+++++
T Consensus 97 ~~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~-r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~-- 173 (645)
T 3j08_A 97 ETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVI-RDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE-- 173 (645)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEE-ETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEE--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEEEEEEEEE--
T ss_conf 999999999999999999999999999999861799979999-99979998899979899999889998866899998--
Q ss_pred CCCCEEEEEECCCCCCCCCEEECCCCCCCCCCCHHHHCCCEEEEEEECCCCCCEEEEEEEEECCEEEECCCCCEEECCCE
Q ss_conf 89860899711578987625530344579899633321450799960799993168999998891430499871413606
Q 002656 181 YEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSK 260 (896)
Q Consensus 181 ~~~g~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~l~g~~~~l~~~Nil~rgs~ 260 (896)
|.|+||||+|||||.|+.|.+.+.. |+||.+.+|.
T Consensus 174 ---G~~~VdeS~LTGES~Pv~K~~g~~v---------------------------~~Gt~~~~g~--------------- 208 (645)
T 3j08_A 174 ---GESYVDESMISGEPVPVLKSKGDEV---------------------------FGATINNTGV--------------- 208 (645)
T ss_dssp ---CCEEEECHHHHCCSSCEEECTTCEE---------------------------CTTCEECSSC---------------
T ss_pred ---CCEEEECCCCCCCCCCEECCCCCEE---------------------------ECCEEEECCC---------------
T ss_conf ---8689980224699876560899974---------------------------1667982572---------------
Q ss_pred EECCCEEEEEEEEECCCCC---EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCC
Q ss_conf 5148859999999416300---0003689999767799999999999999999999999997640011568973224888
Q 002656 261 LRNTAHVYGSVIFTGHDSK---VMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPK 337 (896)
Q Consensus 261 l~nt~~~~giVi~tG~~Tk---~~~~~~~~~~k~s~~~~~~~~~~~~~~~~~iil~~i~~i~~~~~~~~~~~~~~~l~~~ 337 (896)
+.+.|++||.+|. +.+....++.+++++++.+++++.+++++.++++++.++.+.++... +|.
T Consensus 209 ------~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~----~~~---- 274 (645)
T 3j08_A 209 ------LKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHA----PLL---- 274 (645)
T ss_dssp ------EEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCSC----SCC----
T ss_pred ------EEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC----CHH----
T ss_conf ------999999727745999999999973146985899999999999999999999999999995698----699----
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCEEE
Q ss_conf 98754599998655799999999985054431002459999999999984012234477899814413642000224049
Q 002656 338 ETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDT 417 (896)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~ 417 (896)
..+.+++.+++..|||+|+++++++...+..++ .++++++|+++.+|.||++++
T Consensus 275 ----------------~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~----------a~~gilvk~~~~lE~lg~v~~ 328 (645)
T 3j08_A 275 ----------------FAFTTLIAVLVVACPCAFGLATPTALTVGMGKG----------AELGILIKNADALEVAEKVTA 328 (645)
T ss_dssp ----------------CTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTCCCCSSTTHHHHGGGCCE
T ss_pred ----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHCCEEECCCHHHHHHHCCCE
T ss_conf ----------------999999999998736689999999999999999----------977937668169998627999
Q ss_pred EEECCCCCCCCCCEEEEEEEECCEECCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98649984100312899999858403689517889999862101255543211001369997310000013689986323
Q 002656 418 ILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKR 497 (896)
Q Consensus 418 I~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (896)
||||||||||+|+|.+.++...+..
T Consensus 329 i~fDKTGTLT~~~~~v~~~~~~~~~------------------------------------------------------- 353 (645)
T 3j08_A 329 VIFDKTGTLTKGKPEVTDLVPLNGD------------------------------------------------------- 353 (645)
T ss_dssp EEEEGGGTSSSSCCEEEEEEESSSC-------------------------------------------------------
T ss_pred EEECCCCCCCCCCEEEEEEEECCCC-------------------------------------------------------
T ss_conf 9986866655897079999817999-------------------------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEECCCE
Q ss_conf 45897534500016687899984779999999842040561125899964885089519999999998795999772985
Q 002656 498 RIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSS 577 (896)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~Alv~~a~~~g~~~~~~~~~~ 577 (896)
..+++...+.|.. .+.||++.|++++++..|+.+...
T Consensus 354 -------------------------~~~~l~~aa~~e~--------------~s~hPla~Aiv~~a~~~g~~~~~~---- 390 (645)
T 3j08_A 354 -------------------------ERELLRLAAIAER--------------RSEHPIAEAIVKKALEHGIELGEP---- 390 (645)
T ss_dssp -------------------------HHHHHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCSC----
T ss_pred -------------------------HHHHHHHHHHHHH--------------CCCCHHHHHHHHHHHHCCCCCCCC----
T ss_conf -------------------------7999999999751--------------588746799999999659986786----
Q ss_pred EEEEECCCCCCCCCEEEEEEEEEECCCCCCEEEEEEEECCCCCEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHC
Q ss_conf 99995189999972259999663048889705899998389939999746602555752016421199999999999853
Q 002656 578 VFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEA 657 (896)
Q Consensus 578 ~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~ 657 (896)
..++ +...+. +.. ..+.+|+++.+.+. +....+.+...++++..+
T Consensus 391 ---------------~~~~--------~~~g~g-~~~-------~~v~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~ 435 (645)
T 3j08_A 391 ---------------EKVE--------VIAGEG-VVA-------DGILVGNKRLMEDF----GVAVSNEVELALEKLERE 435 (645)
T ss_dssp ---------------CCCE--------EETTTE-EEE-------TTEEEECHHHHHHT----TCCCCHHHHHHHHHHHTT
T ss_pred ---------------CCEE--------EECCCC-EEE-------EEEEECCHHHHHHC----CCCCCHHHHHHHHHHHHC
T ss_conf ---------------5359--------965884-699-------99998879999754----987518899999999855
Q ss_pred CCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCEE
Q ss_conf 78088999982798899999999999874100088999999998401261798866421446789399999999759929
Q 002656 658 GLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKI 737 (896)
Q Consensus 658 GlR~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~lr~~v~e~I~~L~~agIkv 737 (896)
|+|++++|+ |++++|+++++|++|++++++|+.|+++||++
T Consensus 436 g~~~l~va~---------------------------------------~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v 476 (645)
T 3j08_A 436 AKTAVIVAR---------------------------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKV 476 (645)
T ss_dssp TCCCEEEEE---------------------------------------TTEEEEEEEEECCCTTTHHHHHHHHHHTTCEE
T ss_pred CCEEEEEEE---------------------------------------CCEEEEEEEECCCCHHHHHHHHHHHHHCCCEE
T ss_conf 983899988---------------------------------------99999999934876567999999999779979
Q ss_pred EEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHH
Q ss_conf 99939857789999976563335843899925893036899999999779999985665421038987746999908303
Q 002656 738 WVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTL 817 (896)
Q Consensus 738 ~ilTGD~~~tA~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l 817 (896)
||+|||+..+|..+|+++|+..
T Consensus 477 ~~~TGd~~~~a~~ia~~lgi~~---------------------------------------------------------- 498 (645)
T 3j08_A 477 GMITGDNWRSAEAISRELNLDL---------------------------------------------------------- 498 (645)
T ss_dssp EEECSSCHHHHHHHHHHHTCSE----------------------------------------------------------
T ss_pred EEEECCCHHHHHHHHHHCCCCE----------------------------------------------------------
T ss_conf 9990888799999999839978----------------------------------------------------------
Q ss_pred HHHCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCEEE-ECCCCC-CCC
Q ss_conf 241204699999998630690599928911099999998603999899993992309998878710997-173200-237
Q 002656 818 AYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI-SGVEGM-QVG 895 (896)
Q Consensus 818 ~~~l~~~~~~~~~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND~~ml~~AdVGIgi-sg~eg~-qaa 895 (896)
++++++|+||..+++.+++ . +.|+|+|||.||++||++||+||++ .|++.. .+|
T Consensus 499 ----------------------~~~~~~P~~K~~~v~~l~~-~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~A 554 (645)
T 3j08_A 499 ----------------------VIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESG 554 (645)
T ss_dssp ----------------------EECSCCTTCHHHHHHHHTT-T-CCEEEEECSSSCHHHHHHSSEEEEECCCSCCSSCCS
T ss_pred ----------------------EEEECCHHHHHHHHHHHHH-C-CEEEEEECCHHHHHHHHHCCEEEEECCCCHHHHHHC
T ss_conf ----------------------9983787768999999860-9-959999697768999975998899488759999869
No 9
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=1.00 E-value=1 Score=189.35 Aligned_cols=101 Identities=25% Similarity=0.446 Sum_probs=88.9
Q ss_pred CCEEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH
Q ss_conf 61798866421446789399999999759929999398577899999765633358438999258930368999999997
Q 002656 706 DLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKD 785 (896)
Q Consensus 706 dl~llG~~~i~D~lr~~v~e~I~~L~~agIkv~ilTGD~~~tA~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 785 (896)
+-.+.|.+.+.|+++|++.++|+.|++.|++++|+|||+..++..++..+|+..
T Consensus 124 ~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-------------------------- 177 (263)
T 2yj3_A 124 NGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE-------------------------- 177 (263)
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCEEE
Q ss_conf 79999985665421038987746999908303241204699999998630690599928911099999998603999899
Q 002656 786 NILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTL 865 (896)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~g~~vl 865 (896)
+|+.+.|..|..+++.++. .+..|+
T Consensus 178 ------------------------------------------------------~f~~~~p~~k~~~~~~l~~-~~~~~~ 202 (263)
T 2yj3_A 178 ------------------------------------------------------YYSNLSPEDKVRIIEKLKQ-NGNKVL 202 (263)
Q ss_pred EECCCHHHHHHHHHCCCCEEEE
Q ss_conf 9939923099988787109971
Q 002656 866 AIGDGANDVGMIQEADIGIGIS 887 (896)
Q Consensus 866 ~iGDG~ND~~ml~~AdVGIgis 887 (896)
|||||.||++|++.|++||++.
T Consensus 203 ~VGD~~~D~~aa~~Agv~va~g 224 (263)
T 2yj3_A 203 MIGDGVNDAAALALADVSVAMG 224 (263)
No 10
>3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli}
Probab=1.00 E-value=1 Score=153.41 Aligned_cols=141 Identities=23% Similarity=0.265 Sum_probs=107.6
Q ss_pred HHHHHHHHCCEEEECCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCEEEEEEEEEECCC
Q ss_conf 99999842040561125899964885089519999999998795999772985999951899999722599996630488
Q 002656 525 LFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFT 604 (896)
Q Consensus 525 ~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~Alv~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~ 604 (896)
+.+...++|+..... .++|.|.|+++++...+..- ....|+++..+||+
T Consensus 17 ~vl~~a~L~s~~~~~-----------~~n~~d~Ail~~~~~~~~~~--------------------~~~~~~~~~eiPFd 65 (170)
T 3gwi_A 17 RVLHSAWLNSHYQTG-----------LKNLLDTAVLEGTDEESARS--------------------LASRWQKIDEIPFD 65 (170)
T ss_dssp HHHHHHHHHHHHCCS-----------CCCHHHHHHHHTSCHHHHHH--------------------HHHHSEEEEEECCC
T ss_pred HHHHHHHHCCCCCCC-----------CCCHHHHHHHHHHHHCCHHH--------------------HHHCCEEEEEEECC
T ss_conf 999999982799888-----------98828999999988607255--------------------66408177567348
Q ss_pred CCCEEEEEEEECCCCCEEEEECCCCHHHHHHHHCC---------CCCCHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHH
Q ss_conf 89705899998389939999746602555752016---------421199999999999853780889999827988999
Q 002656 605 SKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKN---------GRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYS 675 (896)
Q Consensus 605 s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~~~~GlR~l~~A~k~l~~~e~~ 675 (896)
|.||||||+++.+++.+++|+|||||.|+++|+.. +++.+..+...++.|+.+|+|||++|||.++..+..
T Consensus 66 s~rKrmsvv~~~~~g~~~l~~KGApE~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~ 145 (170)
T 3gwi_A 66 FERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGD 145 (170)
T ss_dssp TTTCEEEEEEESSSSEEEEEEEECHHHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSC
T ss_pred CCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCC
T ss_conf 52495899999689979999859839999986887619975239999999999999999847998999999988887565
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEECCCC
Q ss_conf 99999999874100088999999998401261798866421446
Q 002656 676 AWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKL 719 (896)
Q Consensus 676 ~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~i~D~l 719 (896)
.. ...|+||+|+|++||-|.-
T Consensus 146 --------------~~---------~~~E~~L~f~G~~g~~~~~ 166 (170)
T 3gwi_A 146 --------------YQ---------RADESDLILEGYIAFLDHH 166 (170)
T ss_dssp --------------CC---------GGGSCSEEEEEEEEEEC--
T ss_pred --------------CC---------CCCCCCCEEEEHHCCCCCC
T ss_conf --------------67---------5555792987112032321
Done!