Your job contains 1 sequence.
>002658
MSSQPNKFTKPAKPTSQGQQSSSANASRSSSLSSHLAMVEMKQKILTSLSKLADRDTHQI
AIEDLEKTIQTLSQESLPMLLNCLYESSNDPKPAVKKESVRLLALVCELHSELTSTHVTK
IISHIVKRLKDSDSGMKEACRDSIGSLSKLYLNGKEENNGTVVGLFVKPLFEAMMEQNKG
VQSGAAMCMAKMVECASDPPVVAFQKLCARICKLLSNQNFMAKASLLPVVGSLSQVGAIA
PQSLEPLLQSIHECLGSTDWATRKAAADALSALALHSSNLVIDGATSTLTVLEACRFDKI
KPVRDSMNEALQLWKKIAGKVDVGSDDQKSSPGGKAPEPGEDLKNLNPSDKRAELSAKGP
LNGSSPASASLTKGKAGNISEKAVVILKKKAPALSDKELNPEFFQNLSRGSGDLPVEVVV
PRRCLNSSNSNNEEESDPSDLDSKGRSNRMGNSQTDDFSVSLNNKHRSIDRGTAGGNGKD
PRMRAPDVERELSGNRAGFSKTDSQAEGSFINNKGNWLAIQRQLMQLERQQAHLMNMLQD
FMGGSHDSMVTLENRVRGLERVVEDMARDLSISSGRRGSNFAMGFEGSNNRSLGKYNGFA
EYSGTKYNGRTPFGERFAQSDGVAASTRGRGPSWRSDMSDAWDFTAYCASRNGQLGSRRA
PGGGPVDSRSPKSEHDNDQVGGRRAWDKGTGPVRLGEGPSARSVWQASKDEATLEAIRVA
GEDSGTSRSARVAIPELTAEAMGDDNVGQERDPIWTSWTNAMDAIQVGDLDTAYAEVVST
GDDFLLVKLMDRSGPVVDQLSNEVANEVLHAIGQFLLEQNLFDICLSWIQQLVELVLENG
PHVLGIPMELKKELLLNLHEASTTMDPPEDWEGPAPDQLLLQLASAWEIELQQFDK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002658
(896 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2136467 - symbol:TOR1 "TORTIFOLIA 1" species:3... 1598 3.4e-164 1
TAIR|locus:2036411 - symbol:AT1G50890 "AT1G50890" species... 1098 3.3e-111 1
TAIR|locus:2060161 - symbol:AT2G07170 species:3702 "Arabi... 536 1.3e-72 4
TAIR|locus:2025906 - symbol:AT1G59850 "AT1G59850" species... 430 2.8e-50 2
TAIR|locus:2205739 - symbol:AT1G27210 species:3702 "Arabi... 427 2.8e-47 2
TAIR|locus:2154144 - symbol:AT5G62580 species:3702 "Arabi... 345 1.6e-38 2
TAIR|locus:504956282 - symbol:AT1G54385 species:3702 "Ara... 136 2.1e-05 1
>TAIR|locus:2136467 [details] [associations]
symbol:TOR1 "TORTIFOLIA 1" species:3702 "Arabidopsis
thaliana" [GO:0009507 "chloroplast" evidence=ISM] [GO:0007275
"multicellular organismal development" evidence=IMP] [GO:0009826
"unidimensional cell growth" evidence=IMP] [GO:0010031
"circumnutation" evidence=IMP] [GO:0008017 "microtubule binding"
evidence=IDA] [GO:0010005 "cortical microtubule, transverse to long
axis" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
InterPro:IPR016024 GO:GO:0007275 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 EMBL:AL035680 EMBL:AL161566
GO:GO:0009826 GO:GO:0008017 GO:GO:0010031 GO:GO:0010005
EMBL:AB176521 EMBL:AJ249836 EMBL:BT006451 IPI:IPI00530987
PIR:T06036 RefSeq:NP_194436.2 UniGene:At.32124
ProteinModelPortal:Q9T041 SMR:Q9T041 IntAct:Q9T041 STRING:Q9T041
PaxDb:Q9T041 PRIDE:Q9T041 EnsemblPlants:AT4G27060.1 GeneID:828814
KEGG:ath:AT4G27060 TAIR:At4g27060 eggNOG:NOG291487
HOGENOM:HOG000029994 InParanoid:Q9T041 OMA:GGSHDSM PhylomeDB:Q9T041
ProtClustDB:CLSN2680449 Genevestigator:Q9T041 GermOnline:AT4G27060
Uniprot:Q9T041
Length = 864
Score = 1598 (567.6 bits), Expect = 3.4e-164, P = 3.4e-164
Identities = 403/838 (48%), Positives = 504/838 (60%)
Query: 10 KPAKPTXXXXXXXXXXXXXXXXXXXHLAMVEMKQKILTSLSKLADRDTHQIAIEDLEKTI 69
KP +P AMVE+KQKILTS+SKLADRDT+QIA+EDLEKTI
Sbjct: 12 KPTRPARSSSLATRSCSNSGSLTSFQ-AMVELKQKILTSISKLADRDTYQIAVEDLEKTI 70
Query: 70 QTLSQESLPMLLNCLYESSNDPKPAVKKESVRLLALVCELHSELTSTHVTKIISHIVKRL 129
Q+L+ E+LPM LNCLY+S +DPKPAVKKE + LL+ VC LH + T+ H+TKII+ IVKRL
Sbjct: 71 QSLTPETLPMFLNCLYDSCSDPKPAVKKECLHLLSYVCSLHCDSTAAHLTKIIAQIVKRL 130
Query: 130 KDSDSGMKEACRDSIGSLSKLYLNGKEE--NNGTV---VGLFVKPLFEAMMEQNKGVQSG 184
KDSDSG+++ACRD+IG+LS +YL GKEE N G+ VGLFVKPLFEAM EQNK VQSG
Sbjct: 131 KDSDSGVRDACRDTIGALSGIYLKGKEEGTNTGSASLAVGLFVKPLFEAMGEQNKVVQSG 190
Query: 185 AAMCMAKMVECASDPPVVAFQKLCARICKLLSNQNFMAKASLLPVVGSLSQVGAIAPQSL 244
A+MCMA+MVE A+ PPV +FQKLC RICKLLSN +F+AKASLLPVV SLSQVGAIAPQSL
Sbjct: 191 ASMCMARMVESAASPPVTSFQKLCPRICKLLSNSSFLAKASLLPVVSSLSQVGAIAPQSL 250
Query: 245 EPLLQSIHECLGSTDWATRKXXXXXXXXXXXXXXNLVIDGATSTLTVLEACRFDKIKPVR 304
E LL+SIH+CLGSTDW TRK L+ + ST+TVLE CRFDKIKPVR
Sbjct: 251 ESLLESIHDCLGSTDWVTRKAAAETLTALASHSSGLIKEKTDSTITVLETCRFDKIKPVR 310
Query: 305 DSMNEALQLWKKIAGK-VDVGSDDQKSSPGGKAPEPGEDLKNLNPSDKRAELSAKGPLNG 363
+S+ EALQLWKKI+GK VD SDD K S + + G + KN A+L K +G
Sbjct: 311 ESVTEALQLWKKISGKYVDGASDDSKLSA---SEQLGSE-KNGEKRSNLADLMKKEASDG 366
Query: 364 SSPASASLTKGKAGNISEKAVVILKKKAPALSDKELNPEFFQNLSRGSGDLPVEVVVPRR 423
S+ + S +KGK G EKAV +LKKKAP LSDK+ NPEFFQ L R VEVVVPRR
Sbjct: 367 STLSPDSASKGK-GCFPEKAVGLLKKKAPVLSDKDFNPEFFQRLERRQS---VEVVVPRR 422
Query: 424 CLXXXXXXXXXXXDPSDLDSKGRSNRMGNSQTDDFSVSLNNKHRSIDRGTAGGNGKDPRM 483
C DL++ G SNR+ N+Q DD V K R G+ D +
Sbjct: 423 CKNNDEEESGL----DDLNAMGSSNRLKNTQADDKQV----KGRFDGNGSQARTSGDDKA 474
Query: 484 RAPDVERELSGNRAGFSKTDSQAEGSFINNKGNWLAIQRQLMQLERQQAHLMNMLQDFMG 543
+ +E G+ A S TD+Q+EGSF +N+GNW AIQRQL+QLERQQ +LMNMLQ+F+G
Sbjct: 475 GVVN-GKETPGHHAPVSNTDNQSEGSFTSNRGNWSAIQRQLLQLERQQTNLMNMLQEFIG 533
Query: 544 GSHDSMVTLENRVRGLERVVEDMARDLSISSGRRGSNFA-MG-FEGSNNRSLGKYNGFAE 601
GSHDSMVTLE RVRGLER+VEDMARDLSISSGRR + A G + N GKYNG A
Sbjct: 534 GSHDSMVTLEGRVRGLERIVEDMARDLSISSGRRANLTAGFGKYNSFANYPTGKYNGRAP 593
Query: 602 YS-GTKYNGRTPFGERFAQSDGV--------AASTRGRGPSWRSDMSDAWDFTAYCASRN 652
G++ +G G R SD AAS G+ RS S+ ++ R
Sbjct: 594 GERGSQTDGAMR-G-RMWNSDMADDWFIPPHAASRNGQAGPRRSPRSEQYENEHMGNGRR 651
Query: 653 G----QLGSRRAPGGGPVDSRSP-KSEHDNDQVGGRR-AWDKGT--GPVRLGEGPSARSV 704
G G+ R G GP +RS ++ D + R A + G P R+ P A ++
Sbjct: 652 GWDNKASGTIRF-GEGP-SARSVWQASKDEATLEAIRVAGEDGAVPRPTRVAVAPEAEAM 709
Query: 705 WQASKDEATLEAIRVAGEDSGTSRSARVA-IPELTAEAM--GD--------DNVGQERDP 753
+ + I V+ S S RV I AE + GD D G D
Sbjct: 710 GDDDNEGQERDPIWVSW--SNAMHSLRVGDIDAAYAEVLCAGDQHLVIKLMDKTGPSLDQ 767
Query: 754 IWTSWTN-AMDAIQVGDLDTAYAEVVSTGDDFLLVKLMDRSGPVVDQLSNEVANEVLH 810
+ N A++ I LD + ++ + LL +L+ + G + E+ E+L+
Sbjct: 768 MSNEIANEALNFISQFLLDHSLYDICLSWSQQLL-ELVLQDGADTFGVPMELKTEILY 824
Score = 921 (329.3 bits), Expect = 1.9e-92, P = 1.9e-92
Identities = 195/388 (50%), Positives = 254/388 (65%)
Query: 513 NKGNWLAIQRQLMQLERQQAHLMNMLQDFMGGSHDSMVTLENRVRGLERVVEDMARDLSI 572
++G++ + + ++RQ L + M + + + + LE V + R +
Sbjct: 496 SEGSFTSNRGNWSAIQRQLLQLERQQTNLMNMLQEFIGGSHDSMVTLEGRVRGLER--IV 553
Query: 573 SSGRRGSNFAMGFEGSNNRSLGKYNGFAEYSGTKYNGRTPFGERFAQSDGVAASTRGRGP 632
R + + G + GKYN FA Y KYNGR P GER +Q+DG + RGR
Sbjct: 554 EDMARDLSISSGRRANLTAGFGKYNSFANYPTGKYNGRAP-GERGSQTDG---AMRGR-- 607
Query: 633 SWRSDMSDAWDFTAYCASRNGQLGSRRAPGGGPVDSRSPKSEHDNDQVG-GRRAWD-KGT 690
W SDM+D W + ASRNGQ G RR+P RS +++N+ +G GRR WD K +
Sbjct: 608 MWNSDMADDWFIPPHAASRNGQAGPRRSP-------RS--EQYENEHMGNGRRGWDNKAS 658
Query: 691 GPVRLGEGPSARSVWQASKDEATLEAIRVAGEDSGTSRSARVAI-PELTAEAMGDD-NVG 748
G +R GEGPSARSVWQASKDEATLEAIRVAGED R RVA+ PE AEAMGDD N G
Sbjct: 659 GTIRFGEGPSARSVWQASKDEATLEAIRVAGEDGAVPRPTRVAVAPE--AEAMGDDDNEG 716
Query: 749 QERDPIWTSWTNAMDAIQVGDLDTAYAEVVSTGDDFLLVKLMDRSGPVVDQLSNEVANEV 808
QERDPIW SW+NAM +++VGD+D AYAEV+ GD L++KLMD++GP +DQ+SNE+ANE
Sbjct: 717 QERDPIWVSWSNAMHSLRVGDIDAAYAEVLCAGDQHLVIKLMDKTGPSLDQMSNEIANEA 776
Query: 809 LHAIGQFLLEQNLFDICLSWIQQLVELVLENGPHVLGIPMXXXXXXXXXXHEASTTMDPP 868
L+ I QFLL+ +L+DICLSW QQL+ELVL++G G+PM +A +TMDPP
Sbjct: 777 LNFISQFLLDHSLYDICLSWSQQLLELVLQDGADTFGVPMELKTEILYNLQDACSTMDPP 836
Query: 869 EDWEGPAPDQLLLQLASAWEIELQQFDK 896
EDWEGPAP+QL++QLAS WEI+LQQFDK
Sbjct: 837 EDWEGPAPEQLVVQLASVWEIDLQQFDK 864
>TAIR|locus:2036411 [details] [associations]
symbol:AT1G50890 "AT1G50890" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR016024 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0005874
EMBL:AC079284 HOGENOM:HOG000029994 IPI:IPI00521044 PIR:H96545
RefSeq:NP_175502.2 UniGene:At.37931 ProteinModelPortal:F4I6M4
PRIDE:F4I6M4 EnsemblPlants:AT1G50890.1 GeneID:841511
KEGG:ath:AT1G50890 TAIR:At1g50890 eggNOG:NOG272349
InParanoid:Q9C6J1 OMA:MISLENR Uniprot:F4I6M4
Length = 821
Score = 1098 (391.6 bits), Expect = 3.3e-111, P = 3.3e-111
Identities = 289/692 (41%), Positives = 395/692 (57%)
Query: 35 HLAMVEMKQKILTSLSKLADRDTHQIAIEDLEKTIQTL--SQESLPMLLNCLYESSNDPK 92
H AMVE+KQ+ILTSLS+L DRDT+QIA++DLEK + ++ S E LP+LL+CL++SS+D K
Sbjct: 31 HSAMVELKQRILTSLSRLGDRDTYQIAVDDLEKIVVSVPDSPEILPVLLHCLFDSSSDLK 90
Query: 93 PAVKKESVRLLALVCELHSELTSTHVTKIISHIVKRLKDSDSGMKEACRDSIGSLSKLYL 152
VK+ES+RLL+ +C +++L+ + + KIISHIVKRLKD+D+G+++ACRD+IGSLS +L
Sbjct: 91 APVKRESIRLLSFLCLSYTDLSFSQLAKIISHIVKRLKDADNGVRDACRDAIGSLSAQFL 150
Query: 153 NGKEENNG-----TVVGLFVKPLFEAMMEQNKGVQSGAAMCMAKMVECASDPPVVAFQKL 207
KE NG ++VGLF KPLFEAM EQNK +QSGAA+CM KM++ A++PPV AFQKL
Sbjct: 151 KEKEVENGNYVGSSLVGLFAKPLFEAMAEQNKSLQSGAAICMGKMIDSATEPPVAAFQKL 210
Query: 208 CARICKLLSNQNFMAKASLLPVVGSLSQVGAIAPQSLEPLLQSIHECLGSTDWATRKXXX 267
C RI KLL++ N++ KASLLPVVGSLSQVGAIAPQSLE LL SIHECLG T+W TRK
Sbjct: 211 CPRISKLLNSPNYITKASLLPVVGSLSQVGAIAPQSLESLLHSIHECLGCTNWVTRKAAA 270
Query: 268 XXXXXXXXXXXNLVIDGATSTLTVLEACRFDKIKPVRDSMNEALQLWKKIAGKVDVGS-D 326
+LV D STLT LEACRFDKIKPVR+S++EAL +WK IAGK + G+ D
Sbjct: 271 DVLISLAVHSSSLVADKTDSTLTALEACRFDKIKPVRESLSEALNVWKNIAGKGESGTMD 330
Query: 327 DQK--SSPGGKAPEPGEDLKNLNPSDKRAELSAKGPLNGSSPASASLTKGKAGNISEKAV 384
DQK SS GE + S + A L +G +G S +S S++K AV
Sbjct: 331 DQKDVSSEQCILERNGE---TDSVSCEEAGLVMQGSCDGLSSSSDSISK---------AV 378
Query: 385 VILKKKAPALSDKELNPEFFQNLS-RGSGDLPVEVVVPRRCLXXXXXXXXXXXDPSDLDS 443
+IL+KKAP L+ K+LNPEFFQ L RGSGD+PVEV++P R D +
Sbjct: 379 LILRKKAPRLTGKDLNPEFFQKLEKRGSGDMPVEVILPSRQKNSSNSNTEDESDANTSVL 438
Query: 444 KGRSNRMGNSQTDDFSVSLNNKHRSIDRGTAGGNGKDPRMRAPDVE-RELSGNRAGFSKT 502
+ RSN G +T ++ K R A D RM + R G+ +
Sbjct: 439 RSRSN--GLCRT----AGVHTKQRHFG-DFAREKWVDERMNGGESRLRAFDGDHTEVIQA 491
Query: 503 D-SQAEGSFINNKGNWLAIQRQLMQLERQQAHLMNMLQDFMGGSHDSMVTLENRVRGLER 561
D S+ G++ + L ++RQ + M D M + + LE V + R
Sbjct: 492 DTSENRGNWPPLQRQLLHLERQQTHIMNMLQDFMGGSHDGMISLENRVRGLERIVEEMSR 551
Query: 562 V--VEDMARDLSISSGRRGSNFAMGFEGSNN--RSLGKYNGFAEYSGTKYNGRTPFGERF 617
++ AR + +S R + G++ N S + GT + ++ R
Sbjct: 552 EMSIQSGARGKATASWRSDVD---GWDSPNYGPSSRNTQTSTRKIRGTGPSEQSGNSRRA 608
Query: 618 AQSDGVAASTRGRGPSWRSDMSDAWDFTAYCASR-NGQ-LGSRRAPGGGPVDSRSPKSEH 675
VA G GPS RS + D A R G+ G+ R ++ + E
Sbjct: 609 WDKSSVAIRL-GEGPSARSVWQASKDEATLEAIRVAGEDCGTSRNRRVSIPEAEAMMDE- 666
Query: 676 DNDQVGGRRA------WDKGTGPVRLGEGPSA 701
D+D GG++ W +R+G+ SA
Sbjct: 667 DDDNRGGQQGDPIWTCWSNSVHALRVGDTDSA 698
Score = 796 (285.3 bits), Expect = 3.3e-79, P = 3.3e-79
Identities = 166/308 (53%), Positives = 211/308 (68%)
Query: 594 GKYNGFAEYSGTKYNGRTPFGERFAQSDGVAASTRGRGP-SWRSDMSDAWDFTAYC-ASR 651
G ++G + G E ++ + + RG+ SWRSD+ D WD Y +SR
Sbjct: 527 GSHDGMISLEN-RVRGLERIVEEMSREMSIQSGARGKATASWRSDV-DGWDSPNYGPSSR 584
Query: 652 NGQLGSRRAPGGGPVDSRSPKSEHDNDQVGGRRAWDKGTGPVRLGEGPSARSVWQASKDE 711
N Q +R+ G GP SE + RRAWDK + +RLGEGPSARSVWQASKDE
Sbjct: 585 NTQTSTRKIRGTGP-------SEQSGNS---RRAWDKSSVAIRLGEGPSARSVWQASKDE 634
Query: 712 ATLEAIRVAGEDSGTSRSARVAIPELTAEAM---GDDNVG-QERDPIWTSWTNAMDAIQV 767
ATLEAIRVAGED GTSR+ RV+IPE AEAM DDN G Q+ DPIWT W+N++ A++V
Sbjct: 635 ATLEAIRVAGEDCGTSRNRRVSIPE--AEAMMDEDDDNRGGQQGDPIWTCWSNSVHALRV 692
Query: 768 GDLDTAYAEVVSTGDDFLLVKLMDRSGPVVDQLSNEVANEVLHAIGQFLLEQNLFDICLS 827
GD D+A+AEV+STGDD LLVKLMD++GPV+DQLS+++ NE +H+I QFLL+ L+DICLS
Sbjct: 693 GDTDSAFAEVLSTGDDHLLVKLMDKTGPVLDQLSSDMGNEAIHSIAQFLLDHTLYDICLS 752
Query: 828 WIQQLVELVLENGPHVLGIPMXXXXXXXXXXHEASTTMDPPEDWEGPAPDQLLLQLASAW 887
WIQQL+E+ +ENG +GIP+ HEA +T DPPEDWEG APD LL++LAS W
Sbjct: 753 WIQQLLEVSVENGADFMGIPLELKKELLLNLHEALSTTDPPEDWEGLAPDHLLVELASNW 812
Query: 888 EIELQQFD 895
IE+Q FD
Sbjct: 813 NIEIQHFD 820
>TAIR|locus:2060161 [details] [associations]
symbol:AT2G07170 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=RCA] [GO:0006270 "DNA
replication initiation" evidence=RCA] [GO:0006275 "regulation of
DNA replication" evidence=RCA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=RCA] [GO:0007017 "microtubule-based
process" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0016458 "gene silencing" evidence=RCA]
[GO:0031048 "chromatin silencing by small RNA" evidence=RCA]
[GO:0034968 "histone lysine methylation" evidence=RCA] [GO:0051567
"histone H3-K9 methylation" evidence=RCA] [GO:0051726 "regulation
of cell cycle" evidence=RCA] InterPro:IPR000357 InterPro:IPR016024
Pfam:PF02985 EMBL:CP002685 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 IPI:IPI00530465 RefSeq:NP_178730.2
UniGene:At.41010 ProteinModelPortal:F4IK92 SMR:F4IK92 PRIDE:F4IK92
EnsemblPlants:AT2G07170.1 GeneID:815286 KEGG:ath:AT2G07170
OMA:SAVRKEC Uniprot:F4IK92
Length = 820
Score = 536 (193.7 bits), Expect = 1.3e-72, Sum P(4) = 1.3e-72
Identities = 108/293 (36%), Positives = 180/293 (61%)
Query: 40 EMKQKILTSLSKLADRDTHQIAIEDLEKTIQTLSQESLPMLLNCLYESSNDPKPAVKKES 99
E+K+K++ +L+KLADRDT+Q +++LEKT++ L+ + + L+C+ ++ ++ K AV+KE
Sbjct: 26 ELKKKVVIALNKLADRDTYQRGVDELEKTVEHLAPDKVSCFLSCILDTDSEQKSAVRKEC 85
Query: 100 VRLLALVCELHSELTSTHVTKIISHIVKRLKDSDSGMKEACRDSIGSLSKLYLNGKEENN 159
+RL+ + H L ++ K++S IVKRLKD DS +++AC +++G L+ +++N
Sbjct: 86 IRLMGTLARFHEGLVGPYLGKMVSSIVKRLKDPDSVVRDACIETMGVLASKMSCYEDQNF 145
Query: 160 GTVVGLFVKPLFEAMMEQNKGVQSGAAMCMAKMVECASDPPVVAFQKLCARICKLLSNQN 219
G V L VKPLFEA+ +QNK VQSGAA+C+A++++ + + PV Q++ R KLL+N +
Sbjct: 146 GVFVSL-VKPLFEAIGDQNKYVQSGAALCLARVIDSSPEAPVAIIQRMLMRTVKLLNNSH 204
Query: 220 FMAKASLLPVVGSLSQVGAIAPQS-LEPLLQSIHECLGSTDWATRKXXXXXXXXXXXXXX 278
F+AK +++ + S+ G +S L + S + L + DW TRK
Sbjct: 205 FIAKPAVIELNRSIILAGGATSKSVLSSAMSSFQDALKNKDWTTRKAASVALMEIAATGE 264
Query: 279 NLVIDGATSTLTVLEACRFDKIKPVRDSMNEALQLWKKIAGKVDVGSDDQKSS 331
+ S + LE+CRFDK+KPVRDS+ AL+ WK + G + +SS
Sbjct: 265 KFLGPLKASCICSLESCRFDKVKPVRDSVILALKYWKGVPGSDSPEPSETESS 317
Score = 173 (66.0 bits), Expect = 1.3e-72, Sum P(4) = 1.3e-72
Identities = 36/118 (30%), Positives = 66/118 (55%)
Query: 770 LDTAYAEVVSTGDDFLLVKLMDRSGPVVDQLSNEVANEVLHAIGQFLLEQNLFDICLSWI 829
+++ Y +V+S+GD+ LV+L+DR+GPV++ +S++ NE+L + +LLE+ + L W+
Sbjct: 700 VESEYLQVLSSGDELALVELLDRTGPVLESMSSQTINEILSILLSYLLERRFMNSILPWL 759
Query: 830 QQLVELVLENGPHVLGIPMXXXXXXXXXXHEASTTMDPPEDWEGPAPDQLLLQLASAW 887
Q+ +L NG + L IP + ++ MD E A Q+ ++L W
Sbjct: 760 HQVADLSTTNGANYL-IPSARKRAQVLSAIQEASGMDFSNLAERRAVTQIAMKLRKLW 816
Score = 102 (41.0 bits), Expect = 1.3e-72, Sum P(4) = 1.3e-72
Identities = 22/70 (31%), Positives = 42/70 (60%)
Query: 519 AIQRQLMQLERQQAHLMNMLQDFMGGSHDSMVTLENRVRGLERVVEDMARDLSISSGRRG 578
++++QL +E +Q+ L++ LQ F G ++ L+++V LE VE +A++ ++ S
Sbjct: 516 SVRKQLSDIENKQSRLIDQLQVFSTGIMNNFSVLQSKVSSLEYAVEGIAQNAALHSDISN 575
Query: 579 SNFAMGFEGS 588
SNF +GS
Sbjct: 576 SNFVKHNQGS 585
Score = 57 (25.1 bits), Expect = 1.3e-72, Sum P(4) = 1.3e-72
Identities = 29/96 (30%), Positives = 43/96 (44%)
Query: 329 KSSPGGKAPEPGEDLKNLNPSDKRAELSAKGPLNGSSPASASLTKGKAGNISEKAVV-IL 387
K PG +PEP E ++ + S G S S S K K G +S K V +
Sbjct: 301 KGVPGSDSPEPSE-------TESSVKESYNGARESSELFSTSDFKVKDG-MSIKYVTDVT 352
Query: 388 KKKAPALSDKELNPEFFQNLSRGSG--DLPVEVVVP 421
+KK P +S ++ P + + R S D +E+ VP
Sbjct: 353 RKKVP-VSARQ-PPTRYNDDPRKSNQDDWHIEIAVP 386
>TAIR|locus:2025906 [details] [associations]
symbol:AT1G59850 "AT1G59850" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR016024 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AC007258 InterPro:IPR026003 Pfam:PF12765
HOGENOM:HOG000241771 ProtClustDB:CLSN2693175 IPI:IPI00540405
PIR:F96622 RefSeq:NP_176194.1 UniGene:At.66816
ProteinModelPortal:Q9XIE4 SMR:Q9XIE4 EnsemblPlants:AT1G59850.1
GeneID:842279 KEGG:ath:AT1G59850 TAIR:At1g59850 eggNOG:NOG244611
InParanoid:Q9XIE4 OMA:IRSSPSH PhylomeDB:Q9XIE4
Genevestigator:Q9XIE4 Uniprot:Q9XIE4
Length = 498
Score = 430 (156.4 bits), Expect = 2.8e-50, Sum P(2) = 2.8e-50
Identities = 107/364 (29%), Positives = 182/364 (50%)
Query: 36 LAMVEMKQKILTSLSKLADRDTHQIAIEDLEKTIQTLSQESLPMLLNCLYESSNDPKPAV 95
+ + ++KQ+++ L++L+DRDT +A +L+ LS E+ + +NCL + + K V
Sbjct: 17 MTVTDLKQRVIACLNRLSDRDTLALAAAELDSIALNLSPETFSLFINCLQSTDSSAKSPV 76
Query: 96 KKESVRLLALVCELHSELTSTHVTKIISHIVKRLKDSDSGMKEACRDSIGSLSKLYLNGK 155
+K V LL+++ H + + H++K++S +++RL+D DS ++ AC + + + N
Sbjct: 77 RKHCVSLLSVLSRSHGDSLAPHLSKMVSTVLRRLRDPDSSVRAAC---VAASVDMTTN-- 131
Query: 156 EENNGTVVGLFVKPLFEAMMEQ-NKGVQSGAAMCMAKMVECASDPPVVAFQKLCARICKL 214
G + P+ E ++ + Q AAMC+A V+ A +P V QK +I KL
Sbjct: 132 --ITGQPFSILFGPMIETVIHDCDPNAQISAAMCLAAAVDAADEPDVEQLQKALPKIGKL 189
Query: 215 LSNQNFMAKASLLPVVGSLSQVGAIAPQSLEP-----LLQSIHECLGSTDWATRKXXXXX 269
L ++ F AKA LL +G++ +GA+ ++ E LL ++ E L S DW RK
Sbjct: 190 LKSEGFKAKAELLGAIGTV--IGAVGGRNSEKAVLDWLLPNVSEFLSSDDWRARKAAAEA 247
Query: 270 XXXXXXXXXNLVIDGATSTLTVLEACRFDKIKPVRDSMNEALQLWKKIAG---KVDVGSD 326
L + L +LE+ RFDK+K VR++MN L LWK++ G +V S
Sbjct: 248 MARVAMVEEELAPLYKKTCLGILESRRFDKVKLVRETMNRTLGLWKQLEGDSTEVSESSS 307
Query: 327 DQKSSPGGKAPEPGEDLKNLNPSDKRAELSAKGPLNGSSPASASLTKGKAGNISEKAVVI 386
KS+ G + G+ L D+ PL+ S L +G E+ V+
Sbjct: 308 SSKSASSGLSATSGKRSNTLKGKDRNLNT----PLSSKSNDVEPLDRGDTPKDVEQEAVV 363
Query: 387 LKKK 390
K+K
Sbjct: 364 SKEK 367
Score = 127 (49.8 bits), Expect = 2.8e-50, Sum P(2) = 2.8e-50
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 501 KTDSQAEGSFI--NNKGNWLAIQRQLMQLERQQAHLMNMLQDFMGGSHDSMVTLENRVRG 558
KTDS + S +N I+ Q+ Q+E+QQ+ L+++ Q FM SH+ M +LE RVRG
Sbjct: 407 KTDSGSSSSSQAKSNAEELSLIRHQITQIEKQQSSLLDLFQKFMESSHNGMQSLERRVRG 466
Query: 559 LERVVEDMARDLSIS 573
LE ++ DL +S
Sbjct: 467 LETSFSVISTDLLVS 481
>TAIR|locus:2205739 [details] [associations]
symbol:AT1G27210 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] InterPro:IPR016024
EMBL:CP002684 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
InterPro:IPR021133 PROSITE:PS50077 ProtClustDB:CLSN2693175
EMBL:AY057540 EMBL:AY140087 EMBL:BT008391 IPI:IPI00535229
RefSeq:NP_564273.1 UniGene:At.26316 ProteinModelPortal:Q93ZH1
SMR:Q93ZH1 IntAct:Q93ZH1 PRIDE:Q93ZH1 EnsemblPlants:AT1G27210.1
GeneID:839610 KEGG:ath:AT1G27210 TAIR:At1g27210 InParanoid:Q93ZH1
OMA:IKHTISE PhylomeDB:Q93ZH1 ArrayExpress:Q93ZH1
Genevestigator:Q93ZH1 Uniprot:Q93ZH1
Length = 625
Score = 427 (155.4 bits), Expect = 2.8e-47, Sum P(2) = 2.8e-47
Identities = 100/304 (32%), Positives = 167/304 (54%)
Query: 40 EMKQKILTSLSKLADRDTHQIAIEDLEKTIQTLSQESLPMLLNCLYESSNDPKPAVKKES 99
++KQ+++ L+KLADRDT +A +L+ + L+ +S LNC++ + + K V+K+
Sbjct: 34 DLKQRVIACLNKLADRDTLALASAELDSIARNLTHDSFSPFLNCIHNTDSSVKSPVRKQC 93
Query: 100 VRLLALVCELHSELTSTHVTKIISHIVKRLKDSDSGMKEACRDSIGSLSKLYLNGKEENN 159
V LL+++ H + + H+ K++S +++RL+D DS ++ AC + +S + +
Sbjct: 94 VALLSVLSRYHGDSLTPHLAKMVSTVIRRLRDPDSSVRSACAVATADMSA---HVTRQPF 150
Query: 160 GTVVGLFVKPLFEAMMEQ-NKGVQSGAAMCMAKMVECASDPPVVAFQKLCARICKLLSNQ 218
+V KPL E ++++ + +Q GAA+C+A V+ A+DP +K +I KLL +
Sbjct: 151 ASVA----KPLIETLIQEGDSNLQIGAALCLAASVDAATDPESEQLRKSLPKIGKLLKSD 206
Query: 219 NFMAKASLLPVVGSLSQVGAIAPQS-LEPLLQSIHECLGSTDWATRKXXXXXXXXXXXXX 277
F AKA+LL VGS+ G + L+ L+ + E L S DWA RK
Sbjct: 207 GFKAKAALLSAVGSIITAGGAGTKPVLDWLVPVLIEFLSSEDWAARKSAAEALGKVATAE 266
Query: 278 XNLVIDGATSTLTVLEACRFDKIKPVRDSMNEALQLWKKIAGKVDVGSDDQKS-SPGGKA 336
+L + T LE+ RFDK+K VR++MN AL LWK +V +DD+ S SP +
Sbjct: 267 -DLASQYKKTCTTALESRRFDKVKSVRETMNRALNLWK------EVSTDDEASLSPSRSS 319
Query: 337 PEPG 340
+ G
Sbjct: 320 TDDG 323
Score = 133 (51.9 bits), Expect = 2.8e-47, Sum P(2) = 2.8e-47
Identities = 34/92 (36%), Positives = 55/92 (59%)
Query: 520 IQRQLMQLERQQAHLMNMLQDFMGGSHDSMVTLENRVRGLERVVEDMARDLSISSGRRGS 579
I+ QL +E QQ+ L+++LQ FMG S + +LE+RV GLE +++++ DL++S+GR
Sbjct: 477 IREQLALIENQQSSLLDLLQKFMGTSQSGIQSLESRVSGLEMALDEISCDLAVSNGRVPR 536
Query: 580 NFAMGFEGSNNRSLGKYNGFAEYSGTKYNGRT 611
N + G G S K G E+ K+ +T
Sbjct: 537 N-SSGCAGD---SCSKLPG-TEFLSPKFWRKT 563
Score = 46 (21.3 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 317 IAGKVDVGSDDQKSSPGGKAPEPGEDLKNLNPSDKRAELSAKGPL 361
+A VD +D + P+ G+ LK+ K A LSA G +
Sbjct: 177 LAASVDAATDPESEQLRKSLPKIGKLLKSDGFKAKAALLSAVGSI 221
>TAIR|locus:2154144 [details] [associations]
symbol:AT5G62580 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR016024 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:BT010752 IPI:IPI00527330 RefSeq:NP_201064.2
UniGene:At.19834 ProteinModelPortal:Q6NPR6 SMR:Q6NPR6
EnsemblPlants:AT5G62580.1 GeneID:836379 KEGG:ath:AT5G62580
TAIR:At5g62580 eggNOG:NOG328306 HOGENOM:HOG000241771
InParanoid:Q6NPR6 OMA:GKSENGM PhylomeDB:Q6NPR6
ProtClustDB:CLSN2693175 Genevestigator:Q6NPR6 Uniprot:Q6NPR6
Length = 615
Score = 345 (126.5 bits), Expect = 1.6e-38, Sum P(2) = 1.6e-38
Identities = 109/401 (27%), Positives = 184/401 (45%)
Query: 36 LAMVEMKQKILTSLSKLADRDTHQIAIEDLEKTIQTLSQES----LPMLLNCLYESSNDP 91
+A KQ + L+KL DRDT +A +L+ + + S L ++ +
Sbjct: 1 MATKNSKQNMSVLLTKLGDRDTFTMAARELDLMARQIDPSSSSGNLQSFISVILSVDTGD 60
Query: 92 KPAVKKESVRLLALVC-ELHSELTSTHVTKIISHIVKRLKDSDSGMKEACRDSIGSLSKL 150
KPAV+K + LLA++ L S ++KI++ I +RL+D DS ++ C ++ ++S
Sbjct: 61 KPAVRKHCIHLLAVLSVSLPLNSLSPFLSKILTRITRRLRDPDSSIRSTCVAAVSAISS- 119
Query: 151 YLNGKEENNGTVVGLFVKPLFEAMM-EQNKGVQSGAAMCMAKMVECASDP-PVVAFQKLC 208
F+KPL + + EQ Q GAA+C+A ++ ASDP PV Q L
Sbjct: 120 -----RTTKPPFYSAFMKPLADTLFTEQEVNAQIGAALCLAAAIDSASDPDPVRLGQTLL 174
Query: 209 ARICKLLSNQNFMAKASLLPVVGSLSQVGAIAPQSLEPL-LQSIHECL----GSTDWATR 263
R+ KL+ F AK++ + V+GS+ G ++ S+ L+ + +CL S DWA R
Sbjct: 175 PRLEKLVKCNAFKAKSAGVVVIGSVIGAGGLSGTSVSSGGLKGLVDCLLSFLVSEDWAAR 234
Query: 264 KXXXXXXXXXXXXXXNLVIDGATSTLTVLEACRFDKIKPVRDSMNEALQLWKKIAGKVDV 323
K N + + L + E+ ++DK+K VR+ MN+ ++ WK++ D+
Sbjct: 235 KAAAEALGRLATMERNELGEFKAKCLKIFESRKYDKVKAVREVMNQMMEAWKQVP---DL 291
Query: 324 GSDDQKSSPGGKAPEPGEDLKNLNPSDKRA-ELSAKGP---LNGSSPASASLTKGKAGNI 379
++ S P A G+ PS R AK +N S+P +SL
Sbjct: 292 S--EEVSPPRSNASSKGDASDGRYPSGSRVGSTPAKSRTHLVNRSTPPGSSLATTARKQA 349
Query: 380 SEKAVVILKKKAPALSDKELNPEFFQNLS--RGSGDLPVEV 418
+ K++ +K +L+ P + L G +P V
Sbjct: 350 NRKSI---DQKKTSLTASLTKPNVRRRLEWKAGGASIPTGV 387
Score = 144 (55.7 bits), Expect = 1.6e-38, Sum P(2) = 1.6e-38
Identities = 28/57 (49%), Positives = 44/57 (77%)
Query: 520 IQRQLMQLERQQAHLMNMLQDFMGGSHDSMVTLENRVRGLERVVEDMARDLSISSGR 576
I+ QL+Q+E+QQA+LM++LQ F+G S M LE RV GLE +++++ DL++S+GR
Sbjct: 458 IRNQLVQIEQQQANLMDLLQRFVGSSQHGMRGLETRVHGLELALDEISYDLAVSNGR 514
Score = 37 (18.1 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 484 RAPDVERELSGNRAGFSKTDSQAEGSF 510
+ PD+ E+S R+ S ++G +
Sbjct: 287 QVPDLSEEVSPPRSNASSKGDASDGRY 313
>TAIR|locus:504956282 [details] [associations]
symbol:AT1G54385 species:3702 "Arabidopsis thaliana"
[GO:0000245 "spliceosomal complex assembly" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR007022
InterPro:IPR016024 EMBL:CP002684 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0000245 PANTHER:PTHR12794 EMBL:AY735540
EMBL:AY735541 IPI:IPI00526549 RefSeq:NP_001031189.1
RefSeq:NP_683432.1 UniGene:At.50878 ProteinModelPortal:Q5XVI1
SMR:Q5XVI1 PRIDE:Q5XVI1 EnsemblPlants:AT1G54385.1
EnsemblPlants:AT1G54385.2 GeneID:841880 KEGG:ath:AT1G54385
TAIR:At1g54385 InParanoid:Q5XVI1 OMA:SAIQMIN PhylomeDB:Q5XVI1
ProtClustDB:CLSN2917883 Genevestigator:Q5XVI1 Uniprot:Q5XVI1
Length = 560
Score = 136 (52.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 63/300 (21%), Positives = 140/300 (46%)
Query: 41 MKQKILTSLSKLADRDTHQIAIEDLEKTIQTLSQESLPMLLNCLYESSNDPKPAVKKESV 100
++Q+ L +L K D ++ + A++ L+ ++ L +++P L ++E+ + + ++
Sbjct: 9 LRQE-LANLDK--DTESRKSAMKALKSYVKDLDSKAIPGFLAQVFETK-ETNSLSGEYTI 64
Query: 101 RLLALVCELHSELTSTHVTKIISHIVKRLKDSDSG--MKEACRDSIGSLSKLYLNGK--E 156
L ++ +H + I+S IVK L S +++AC I ++++ ++ E
Sbjct: 65 SLYEILARVHGPNIVPQIDTIMSTIVKTLASSAGSFPLQQACSKVIPAIARYGIDPTTTE 124
Query: 157 ENNGTVVGLFVKPLFEAMMEQNKGVQSGAAMCMAKMVECASDPPVVAFQKLCARICK--- 213
+ ++ KPL ++++ + + SGAA+C+ +V+ SD A ++ R+C+
Sbjct: 125 DKKRVIIHSLCKPLTDSLLASQESLTSGAALCLKALVD--SDNWRFASDEMVNRVCQNVV 182
Query: 214 --LLSNQNFMAKASL-LPVVGSLSQVGAIAPQSLEPLLQSIHECL-----GSTDWATRKX 265
L SN N + L + +V SL++ + ++ LL IH L G ++ ++K
Sbjct: 183 VALDSNSN---QTHLQMGLVMSLAKHNPLIVEAYARLL--IHTGLRILGFGVSEGNSQKR 237
Query: 266 XXXXXXXXXXXXX---NLVIDGATSTLTVLEACRFDKIKPVRDSMNEALQLWKKIAGKVD 322
+ + +E C+ D++ VR + EA+ K+IA +++
Sbjct: 238 LSAVQMLNFLMKCLDPRSIYSEVELIIKEMERCQSDQMAYVRGAAYEAMMTSKRIAAELE 297
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.130 0.376 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 896 842 0.00081 122 3 11 23 0.46 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 627 (67 KB)
Total size of DFA: 412 KB (2198 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 79.93u 0.14s 80.07t Elapsed: 00:00:03
Total cpu time: 79.93u 0.14s 80.07t Elapsed: 00:00:03
Start: Mon May 20 17:56:00 2013 End: Mon May 20 17:56:03 2013