Query 002660
Match_columns 895
No_of_seqs 641 out of 4699
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 04:31:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002660.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002660hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR02468 sucrsPsyn_pln sucros 100.0 6E-122 1E-126 1085.0 79.7 877 4-891 170-1050(1050)
2 TIGR02470 sucr_synth sucrose s 100.0 6.4E-56 1.4E-60 516.2 42.3 460 1-502 254-745 (784)
3 PLN00142 sucrose synthase 100.0 4E-55 8.6E-60 509.1 37.5 459 1-502 278-768 (815)
4 TIGR02472 sucr_P_syn_N sucrose 100.0 2.1E-53 4.6E-58 487.7 43.2 438 4-503 1-439 (439)
5 PRK14501 putative bifunctional 100.0 2.5E-52 5.4E-57 503.0 37.3 558 145-890 134-723 (726)
6 PLN02205 alpha,alpha-trehalose 100.0 1.5E-49 3.4E-54 474.7 40.4 543 146-836 203-801 (854)
7 PLN03063 alpha,alpha-trehalose 100.0 1.5E-48 3.1E-53 467.6 45.4 535 145-837 148-722 (797)
8 PLN03064 alpha,alpha-trehalose 100.0 6.6E-47 1.4E-51 448.0 39.5 535 145-836 232-811 (934)
9 TIGR03449 mycothiol_MshA UDP-N 100.0 1.3E-40 2.8E-45 379.8 37.9 402 6-506 1-403 (405)
10 PRK00654 glgA glycogen synthas 100.0 2.5E-40 5.4E-45 381.9 34.6 439 4-507 1-465 (466)
11 cd03800 GT1_Sucrose_synthase T 100.0 2.9E-39 6.3E-44 367.5 38.3 396 5-499 1-397 (398)
12 PLN02939 transferase, transfer 100.0 7.1E-39 1.5E-43 373.8 39.2 447 4-508 482-970 (977)
13 PRK10307 putative glycosyl tra 100.0 8.6E-39 1.9E-43 365.3 39.1 399 4-508 1-411 (412)
14 PLN02316 synthase/transferase 100.0 4.3E-39 9.4E-44 383.2 37.3 416 3-506 587-1035(1036)
15 cd03796 GT1_PIG-A_like This fa 100.0 2.5E-38 5.3E-43 359.5 37.2 367 5-508 1-371 (398)
16 TIGR02095 glgA glycogen/starch 100.0 1.6E-38 3.4E-43 368.8 34.8 441 4-505 1-473 (473)
17 PLN02871 UDP-sulfoquinovose:DA 100.0 1E-37 2.2E-42 360.9 37.7 377 2-509 57-439 (465)
18 PRK14099 glycogen synthase; Pr 100.0 1.3E-37 2.8E-42 357.8 37.4 449 1-508 1-482 (485)
19 TIGR02149 glgA_Coryne glycogen 100.0 1.3E-37 2.8E-42 353.0 36.8 378 4-506 1-388 (388)
20 PRK14098 glycogen synthase; Pr 100.0 4.6E-37 9.9E-42 353.7 35.2 450 3-507 5-488 (489)
21 cd04962 GT1_like_5 This family 100.0 6.7E-36 1.5E-40 336.6 37.8 366 4-505 1-371 (371)
22 PRK15427 colanic acid biosynth 100.0 1.5E-35 3.3E-40 335.4 38.1 279 143-505 117-406 (406)
23 TIGR03088 stp2 sugar transfera 100.0 5.8E-35 1.2E-39 329.6 39.5 357 27-505 12-373 (374)
24 cd03791 GT1_Glycogen_synthase_ 100.0 2.2E-35 4.7E-40 343.7 33.7 442 5-504 1-476 (476)
25 PRK15484 lipopolysaccharide 1, 100.0 1.6E-34 3.5E-39 325.1 38.1 373 1-506 1-379 (380)
26 cd03818 GT1_ExpC_like This fam 100.0 1.1E-34 2.3E-39 329.6 34.4 379 35-500 13-396 (396)
27 cd03805 GT1_ALG2_like This fam 100.0 2.2E-34 4.8E-39 327.0 36.7 387 4-498 1-392 (392)
28 PRK15179 Vi polysaccharide bio 100.0 3.5E-34 7.7E-39 335.9 37.8 289 143-503 399-692 (694)
29 cd04955 GT1_like_6 This family 100.0 4.5E-33 9.9E-38 312.4 36.9 360 5-503 1-363 (363)
30 cd05844 GT1_like_7 Glycosyltra 100.0 1.6E-33 3.4E-38 316.9 31.3 278 143-500 81-366 (367)
31 cd03792 GT1_Trehalose_phosphor 100.0 6.7E-34 1.4E-38 320.5 26.9 286 143-505 84-372 (372)
32 cd03819 GT1_WavL_like This fam 100.0 8.2E-33 1.8E-37 309.4 35.3 343 27-493 8-354 (355)
33 PRK15490 Vi polysaccharide bio 100.0 6.6E-33 1.4E-37 309.6 34.0 291 143-504 279-575 (578)
34 cd03814 GT1_like_2 This family 100.0 2E-32 4.3E-37 306.4 34.8 362 5-503 1-364 (364)
35 cd03813 GT1_like_3 This family 100.0 2.3E-32 5.1E-37 316.4 33.6 293 143-503 172-475 (475)
36 PRK09922 UDP-D-galactose:(gluc 100.0 1.7E-32 3.7E-37 307.2 30.6 347 4-507 1-358 (359)
37 cd03802 GT1_AviGT4_like This f 100.0 5E-32 1.1E-36 300.5 33.6 332 4-503 1-335 (335)
38 cd03795 GT1_like_4 This family 100.0 9.3E-32 2E-36 300.9 35.8 353 5-495 1-357 (357)
39 PLN02846 digalactosyldiacylgly 100.0 1.1E-31 2.5E-36 300.1 35.7 381 3-505 4-392 (462)
40 KOG1111 N-acetylglucosaminyltr 100.0 2E-33 4.4E-38 287.1 19.3 365 4-508 1-370 (426)
41 cd03816 GT1_ALG1_like This fam 100.0 1E-31 2.3E-36 305.7 34.7 375 29-494 14-406 (415)
42 cd03821 GT1_Bme6_like This fam 100.0 1E-31 2.2E-36 301.0 32.9 371 5-499 1-374 (375)
43 PF05116 S6PP: Sucrose-6F-phos 100.0 6.6E-33 1.4E-37 290.2 21.4 245 612-892 2-247 (247)
44 cd03817 GT1_UGDG_like This fam 100.0 3E-31 6.4E-36 297.4 36.4 371 5-504 1-373 (374)
45 cd03794 GT1_wbuB_like This fam 100.0 1.6E-31 3.5E-36 301.1 34.0 385 5-499 1-394 (394)
46 cd03809 GT1_mtfB_like This fam 100.0 1E-31 2.2E-36 300.9 31.3 363 5-499 1-364 (365)
47 PRK10125 putative glycosyl tra 100.0 1.6E-31 3.4E-36 301.5 32.8 369 4-505 1-405 (405)
48 cd03822 GT1_ecORF704_like This 100.0 4.4E-31 9.6E-36 295.9 36.4 356 5-503 1-366 (366)
49 cd03812 GT1_CapH_like This fam 100.0 2E-31 4.4E-36 298.4 33.6 335 27-486 10-346 (358)
50 TIGR03087 stp1 sugar transfera 100.0 1.5E-31 3.3E-36 303.7 32.8 284 143-503 103-395 (397)
51 cd03806 GT1_ALG11_like This fa 100.0 3E-31 6.6E-36 301.6 35.1 373 27-496 12-418 (419)
52 cd03799 GT1_amsK_like This is 100.0 4.7E-31 1E-35 295.0 34.7 268 143-497 78-354 (355)
53 cd04951 GT1_WbdM_like This fam 100.0 9.8E-31 2.1E-35 292.9 36.8 278 143-503 78-359 (360)
54 cd03820 GT1_amsD_like This fam 100.0 1.4E-30 3E-35 288.4 36.1 344 5-499 1-347 (348)
55 cd03825 GT1_wcfI_like This fam 100.0 3.5E-31 7.5E-36 297.2 31.6 345 4-505 1-365 (365)
56 cd03807 GT1_WbnK_like This fam 100.0 1.9E-30 4.1E-35 289.6 37.2 351 28-503 11-365 (365)
57 KOG0853 Glycosyltransferase [C 100.0 5.7E-33 1.2E-37 304.1 16.2 341 84-506 121-469 (495)
58 PLN02949 transferase, transfer 100.0 1.3E-30 2.8E-35 296.7 36.1 238 209-507 214-459 (463)
59 cd03801 GT1_YqgM_like This fam 100.0 1.5E-30 3.2E-35 290.1 35.9 372 5-503 1-374 (374)
60 cd03808 GT1_cap1E_like This fa 100.0 9.8E-30 2.1E-34 282.9 36.5 347 28-499 9-358 (359)
61 PRK10976 putative hydrolase; P 100.0 1.2E-31 2.5E-36 287.1 20.1 236 612-892 2-265 (266)
62 cd03823 GT1_ExpE7_like This fa 100.0 6.3E-30 1.4E-34 285.3 34.5 356 5-504 1-359 (359)
63 TIGR01485 SPP_plant-cyano sucr 100.0 3.9E-31 8.4E-36 279.5 23.1 242 612-893 1-249 (249)
64 PLN02382 probable sucrose-phos 100.0 3.8E-31 8.3E-36 295.4 23.3 247 609-893 6-262 (413)
65 cd03798 GT1_wlbH_like This fam 100.0 1.5E-29 3.3E-34 282.8 35.3 283 143-505 92-377 (377)
66 PRK10513 sugar phosphate phosp 100.0 4.1E-31 9E-36 283.6 20.5 245 612-891 3-268 (270)
67 COG0561 Cof Predicted hydrolas 100.0 5.3E-31 1.1E-35 281.6 20.8 234 611-893 2-263 (264)
68 PRK15126 thiamin pyrimidine py 100.0 3.4E-31 7.4E-36 284.3 18.9 242 612-891 2-262 (272)
69 TIGR02471 sucr_syn_bact_C sucr 100.0 1.4E-29 3E-34 265.7 23.4 233 614-892 1-236 (236)
70 cd03804 GT1_wbaZ_like This fam 100.0 8.4E-29 1.8E-33 276.8 30.8 265 143-498 82-350 (351)
71 TIGR02400 trehalose_OtsA alpha 100.0 1.5E-29 3.2E-34 287.2 24.2 313 145-503 128-455 (456)
72 PLN02887 hydrolase family prot 100.0 6.1E-30 1.3E-34 293.4 20.4 237 609-891 305-579 (580)
73 TIGR02918 accessory Sec system 100.0 1.6E-28 3.5E-33 282.3 32.1 281 143-505 210-500 (500)
74 cd03811 GT1_WabH_like This fam 100.0 4.4E-28 9.5E-33 268.6 34.5 336 28-490 11-352 (353)
75 PLN02275 transferase, transfer 100.0 4.7E-28 1E-32 271.9 33.1 333 30-469 16-371 (371)
76 cd04946 GT1_AmsK_like This fam 100.0 1.4E-28 3.1E-33 279.2 28.8 276 143-499 126-406 (407)
77 PLN02501 digalactosyldiacylgly 100.0 1.8E-27 3.9E-32 267.8 35.4 271 143-503 433-708 (794)
78 COG0297 GlgA Glycogen synthase 100.0 3.9E-28 8.5E-33 271.4 29.3 451 4-509 1-482 (487)
79 PRK03669 mannosyl-3-phosphogly 100.0 5.4E-29 1.2E-33 266.5 20.2 244 610-891 5-268 (271)
80 PRK01158 phosphoglycolate phos 100.0 8.8E-29 1.9E-33 259.1 20.4 225 612-892 3-230 (230)
81 PF00862 Sucrose_synth: Sucros 100.0 7.9E-30 1.7E-34 274.1 12.4 247 1-279 271-531 (550)
82 TIGR01482 SPP-subfamily Sucros 100.0 6E-29 1.3E-33 259.5 15.8 218 615-891 1-225 (225)
83 cd03788 GT1_TPS Trehalose-6-Ph 100.0 1.1E-28 2.4E-33 282.6 17.8 312 144-502 131-459 (460)
84 TIGR02398 gluc_glyc_Psyn gluco 100.0 5.1E-28 1.1E-32 272.0 21.3 314 145-504 133-482 (487)
85 PRK10530 pyridoxal phosphate ( 100.0 3.4E-28 7.3E-33 261.6 18.5 244 612-891 3-271 (272)
86 PHA01630 putative group 1 glyc 100.0 5.7E-27 1.2E-31 256.4 26.0 255 150-504 52-330 (331)
87 PF08282 Hydrolase_3: haloacid 100.0 4.6E-28 1E-32 257.4 16.5 225 615-887 1-254 (254)
88 cd03793 GT1_Glycogen_synthase_ 100.0 1.5E-26 3.3E-31 258.7 29.0 325 143-507 147-589 (590)
89 TIGR01486 HAD-SF-IIB-MPGP mann 100.0 1.8E-27 3.9E-32 252.8 18.1 236 614-890 1-255 (256)
90 PRK00726 murG undecaprenyldiph 99.9 9.1E-26 2E-30 252.8 30.2 345 3-503 1-356 (357)
91 PHA01633 putative glycosyl tra 99.9 1.9E-25 4E-30 241.1 31.1 221 213-500 90-335 (335)
92 cd04949 GT1_gtfA_like This fam 99.9 6.2E-26 1.3E-30 255.8 28.7 274 143-498 98-372 (372)
93 TIGR00099 Cof-subfamily Cof su 99.9 6.1E-27 1.3E-31 249.1 17.0 226 614-887 1-256 (256)
94 PRK10117 trehalose-6-phosphate 99.9 1.9E-26 4E-31 256.1 17.2 317 145-509 124-458 (474)
95 TIGR01487 SPP-like sucrose-pho 99.9 3.5E-26 7.6E-31 236.4 17.3 211 613-887 2-215 (215)
96 KOG1050 Trehalose-6-phosphate 99.9 2.9E-24 6.2E-29 249.4 33.1 524 144-835 140-692 (732)
97 cd03785 GT1_MurG MurG is an N- 99.9 1.4E-24 3E-29 242.6 29.4 331 27-496 8-349 (350)
98 TIGR01133 murG undecaprenyldip 99.9 2.6E-24 5.6E-29 240.3 27.5 328 27-496 9-346 (348)
99 PRK00192 mannosyl-3-phosphogly 99.9 6.8E-25 1.5E-29 235.1 19.4 242 611-890 3-269 (273)
100 PF00982 Glyco_transf_20: Glyc 99.9 8.5E-25 1.9E-29 246.9 15.7 314 144-504 141-474 (474)
101 COG0380 OtsA Trehalose-6-phosp 99.9 9E-24 2E-28 233.0 22.4 314 145-504 148-479 (486)
102 PRK10187 trehalose-6-phosphate 99.9 8.5E-23 1.8E-27 216.4 18.1 195 610-845 12-223 (266)
103 PRK05749 3-deoxy-D-manno-octul 99.9 9.2E-22 2E-26 225.6 27.9 284 143-507 123-422 (425)
104 PRK13609 diacylglycerol glucos 99.9 7.1E-21 1.5E-25 215.0 29.7 264 143-505 103-372 (380)
105 PTZ00174 phosphomannomutase; P 99.9 1.4E-21 3.1E-26 205.8 17.0 210 611-845 4-234 (247)
106 PRK14502 bifunctional mannosyl 99.9 5.1E-21 1.1E-25 217.8 22.6 249 606-890 410-689 (694)
107 cd04950 GT1_like_1 Glycosyltra 99.9 5.9E-20 1.3E-24 206.6 30.9 266 143-504 101-371 (373)
108 TIGR02463 MPGP_rel mannosyl-3- 99.9 1.2E-21 2.6E-26 203.6 15.2 205 614-841 1-220 (221)
109 PRK13608 diacylglycerol glucos 99.9 1.6E-19 3.5E-24 204.0 29.4 268 143-509 103-376 (391)
110 PLN02605 monogalactosyldiacylg 99.9 1.9E-19 4.2E-24 203.0 29.7 265 143-503 99-380 (382)
111 TIGR01484 HAD-SF-IIB HAD-super 99.8 6.6E-21 1.4E-25 195.5 14.2 195 614-841 1-204 (204)
112 PF00534 Glycos_transf_1: Glyc 99.8 1.3E-20 2.8E-25 187.8 13.9 164 306-485 8-172 (172)
113 PLN02580 trehalose-phosphatase 99.8 3.5E-19 7.7E-24 193.1 19.5 211 609-845 116-354 (384)
114 TIGR02461 osmo_MPG_phos mannos 99.8 1.1E-19 2.5E-24 187.8 13.3 200 614-842 1-225 (225)
115 KOG1387 Glycosyltransferase [C 99.8 3.2E-17 7E-22 167.3 28.1 390 27-508 55-462 (465)
116 TIGR00685 T6PP trehalose-phosp 99.8 1.5E-18 3.3E-23 182.4 18.3 221 611-890 2-242 (244)
117 PLN02423 phosphomannomutase 99.8 1.6E-18 3.6E-23 181.6 16.5 208 610-843 5-232 (245)
118 COG0438 RfaG Glycosyltransfera 99.8 8E-16 1.7E-20 169.8 36.0 289 145-507 84-379 (381)
119 cd01635 Glycosyltransferase_GT 99.8 4.8E-17 1E-21 169.0 23.1 119 318-453 109-229 (229)
120 PRK12702 mannosyl-3-phosphogly 99.8 3.1E-17 6.7E-22 169.3 19.8 250 612-890 1-293 (302)
121 PLN03017 trehalose-phosphatase 99.8 4.9E-17 1.1E-21 174.7 21.3 204 609-844 108-335 (366)
122 PRK09814 beta-1,6-galactofuran 99.7 6.8E-16 1.5E-20 170.6 26.1 246 143-497 62-324 (333)
123 PRK00025 lpxB lipid-A-disaccha 99.7 2.5E-16 5.5E-21 178.1 22.9 249 143-487 84-357 (380)
124 TIGR00236 wecB UDP-N-acetylglu 99.7 1.2E-16 2.6E-21 179.5 19.8 274 143-500 85-363 (365)
125 cd03786 GT1_UDP-GlcNAc_2-Epime 99.7 3.5E-16 7.6E-21 175.7 21.6 250 143-478 87-344 (363)
126 TIGR02094 more_P_ylases alpha- 99.7 1.6E-15 3.5E-20 176.4 27.5 336 143-503 160-599 (601)
127 PLN02151 trehalose-phosphatase 99.7 1.9E-16 4.1E-21 169.8 16.8 204 609-844 95-321 (354)
128 KOG2941 Beta-1,4-mannosyltrans 99.7 4.5E-14 9.7E-19 144.8 31.2 374 34-492 28-429 (444)
129 COG1877 OtsB Trehalose-6-phosp 99.7 8.7E-16 1.9E-20 158.7 16.3 193 609-836 15-218 (266)
130 PF02358 Trehalose_PPase: Treh 99.7 3.9E-16 8.5E-21 163.4 11.0 210 616-862 1-233 (235)
131 TIGR03713 acc_sec_asp1 accesso 99.5 1.6E-13 3.5E-18 158.0 19.7 167 315-501 321-518 (519)
132 cd04299 GT1_Glycogen_Phosphory 99.5 6.9E-13 1.5E-17 157.0 25.3 187 309-503 474-688 (778)
133 PF05693 Glycogen_syn: Glycoge 99.5 2E-12 4.4E-17 144.6 19.9 327 144-509 143-586 (633)
134 TIGR00215 lpxB lipid-A-disacch 99.4 7.7E-12 1.7E-16 140.7 21.9 251 143-487 88-367 (385)
135 PF13692 Glyco_trans_1_4: Glyc 99.4 1.4E-13 3E-18 131.1 5.8 131 313-471 2-135 (135)
136 COG0707 MurG UDP-N-acetylgluco 99.4 2E-10 4.3E-15 126.0 31.2 335 26-501 8-354 (357)
137 PRK12446 undecaprenyldiphospho 99.4 1.8E-10 3.8E-15 127.9 29.7 310 26-476 9-330 (352)
138 PF13439 Glyco_transf_4: Glyco 99.4 2.6E-12 5.6E-17 127.8 12.1 169 26-276 9-177 (177)
139 PF13579 Glyco_trans_4_4: Glyc 99.4 1.3E-12 2.9E-17 127.5 9.4 160 29-269 1-160 (160)
140 PF13524 Glyco_trans_1_2: Glyc 99.3 1.5E-11 3.2E-16 108.6 9.9 91 408-500 1-92 (92)
141 COG3769 Predicted hydrolase (H 99.3 1.1E-10 2.4E-15 112.7 14.5 252 611-891 6-271 (274)
142 PF09314 DUF1972: Domain of un 99.2 8.9E-10 1.9E-14 108.1 19.6 182 3-271 1-185 (185)
143 cd03784 GT1_Gtf_like This fami 99.1 8.6E-09 1.9E-13 117.5 23.5 127 311-472 238-373 (401)
144 TIGR02919 accessory Sec system 99.1 1.3E-08 2.8E-13 114.9 24.4 195 213-492 237-432 (438)
145 TIGR01670 YrbI-phosphatas 3-de 99.1 4.8E-10 1E-14 108.9 9.1 73 797-891 76-149 (154)
146 PRK11133 serB phosphoserine ph 99.0 9.4E-10 2E-14 119.2 11.8 71 795-888 246-316 (322)
147 TIGR03492 conserved hypothetic 99.0 1.5E-07 3.3E-12 106.1 27.8 152 324-500 219-394 (396)
148 TIGR02726 phenyl_P_delta pheny 99.0 9.7E-10 2.1E-14 107.5 8.1 69 797-887 82-150 (169)
149 TIGR01426 MGT glycosyltransfer 98.9 6.5E-07 1.4E-11 101.7 28.9 112 380-502 273-390 (392)
150 COG1519 KdtA 3-deoxy-D-manno-o 98.9 1.4E-06 3E-11 94.5 28.6 262 143-487 122-402 (419)
151 TIGR03568 NeuC_NnaA UDP-N-acet 98.8 4.4E-07 9.5E-12 101.4 23.6 263 143-501 92-364 (365)
152 PF13528 Glyco_trans_1_3: Glyc 98.8 2.9E-07 6.3E-12 101.3 21.6 119 311-468 191-317 (318)
153 PRK09484 3-deoxy-D-manno-octul 98.8 5.5E-09 1.2E-13 104.6 6.5 70 798-889 97-166 (183)
154 PF08323 Glyco_transf_5: Starc 98.8 1.3E-08 2.9E-13 106.8 9.2 210 5-234 1-234 (245)
155 TIGR00661 MJ1255 conserved hyp 98.7 2.1E-06 4.5E-11 94.6 22.6 82 381-472 228-315 (321)
156 PF13477 Glyco_trans_4_2: Glyc 98.6 3.6E-07 7.8E-12 87.2 12.1 128 32-223 10-139 (139)
157 COG0381 WecB UDP-N-acetylgluco 98.6 7.3E-06 1.6E-10 88.3 22.5 364 1-503 1-369 (383)
158 smart00775 LNS2 LNS2 domain. T 98.5 2.2E-07 4.7E-12 90.2 7.5 67 614-687 1-89 (157)
159 KOG3189 Phosphomannomutase [Li 98.5 2.2E-06 4.7E-11 81.9 13.4 199 611-834 10-228 (252)
160 COG0560 SerB Phosphoserine pho 98.5 7.4E-07 1.6E-11 91.0 10.1 52 788-842 135-186 (212)
161 TIGR03590 PseG pseudaminic aci 98.4 2.8E-05 6.1E-10 83.5 21.8 98 313-437 171-268 (279)
162 COG4641 Uncharacterized protei 98.4 6.4E-05 1.4E-09 80.5 22.2 192 262-508 162-365 (373)
163 cd01427 HAD_like Haloacid deha 98.3 1.1E-06 2.3E-11 83.2 7.5 52 614-669 1-63 (139)
164 COG1778 Low specificity phosph 98.3 6.9E-07 1.5E-11 82.6 5.8 55 797-856 83-137 (170)
165 PF04007 DUF354: Protein of un 98.3 0.00015 3.2E-09 79.0 24.2 66 394-470 241-309 (335)
166 TIGR01457 HAD-SF-IIA-hyp2 HAD- 98.2 6.9E-06 1.5E-10 86.7 10.3 70 613-687 2-76 (249)
167 PHA03392 egt ecdysteroid UDP-g 98.2 0.00035 7.6E-09 81.3 24.9 154 313-502 297-464 (507)
168 TIGR01689 EcbF-BcbF capsule bi 98.1 6.2E-06 1.3E-10 76.0 7.5 59 613-678 2-84 (126)
169 COG4671 Predicted glycosyl tra 98.1 0.0013 2.9E-08 69.5 24.4 338 3-471 9-365 (400)
170 COG1819 Glycosyl transferases, 98.1 0.00039 8.4E-09 78.7 22.4 114 378-503 280-400 (406)
171 PLN02448 UDP-glycosyltransfera 98.1 0.0048 1E-07 71.3 31.7 91 382-483 323-428 (459)
172 TIGR01684 viral_ppase viral ph 98.1 1.1E-05 2.4E-10 84.1 8.6 72 610-687 124-201 (301)
173 KOG3742 Glycogen synthase [Car 98.1 2.4E-05 5.2E-10 83.7 10.7 108 394-506 493-614 (692)
174 PF02350 Epimerase_2: UDP-N-ac 98.0 0.00015 3.3E-09 80.2 15.9 272 143-502 66-345 (346)
175 PF13844 Glyco_transf_41: Glyc 98.0 7.2E-05 1.6E-09 84.1 12.8 187 299-505 271-467 (468)
176 PRK10444 UMP phosphatase; Prov 97.8 0.00025 5.4E-09 74.5 14.0 64 613-681 2-70 (248)
177 PF03332 PMM: Eukaryotic phosp 97.8 4E-05 8.6E-10 76.4 6.7 185 632-843 2-207 (220)
178 PHA03398 viral phosphatase sup 97.8 6.6E-05 1.4E-09 78.5 8.4 74 609-688 125-204 (303)
179 PLN02208 glycosyltransferase f 97.8 0.046 1E-06 62.5 32.0 112 383-503 312-438 (442)
180 PLN03007 UDP-glucosyltransfera 97.8 0.022 4.9E-07 66.2 29.8 169 312-504 285-480 (482)
181 PLN02562 UDP-glycosyltransfera 97.7 0.032 7E-07 64.1 29.2 139 312-477 273-419 (448)
182 PLN02670 transferase, transfer 97.6 0.06 1.3E-06 62.0 30.4 113 384-506 341-467 (472)
183 COG3980 spsG Spore coat polysa 97.6 0.0037 8E-08 64.2 18.0 140 311-481 157-303 (318)
184 TIGR00338 serB phosphoserine p 97.6 0.00046 1E-08 71.4 12.2 43 797-842 152-194 (219)
185 PRK10017 colanic acid biosynth 97.6 0.1 2.2E-06 59.4 31.1 91 387-486 313-407 (426)
186 COG3914 Spy Predicted O-linked 97.5 0.0033 7.2E-08 70.7 17.5 182 304-506 421-615 (620)
187 PRK02797 4-alpha-L-fucosyltran 97.5 0.015 3.3E-07 61.3 20.9 170 313-508 146-320 (322)
188 PLN02173 UDP-glucosyl transfer 97.4 0.28 6.1E-06 56.2 31.0 82 382-472 317-409 (449)
189 PLN02992 coniferyl-alcohol glu 97.4 0.17 3.6E-06 58.4 29.1 116 383-509 339-474 (481)
190 PRK10671 copA copper exporting 97.4 0.00086 1.9E-08 83.4 11.3 54 612-669 630-689 (834)
191 PLN02410 UDP-glucoronosyl/UDP- 97.3 0.25 5.5E-06 56.7 30.1 83 382-473 324-412 (451)
192 PLN02210 UDP-glucosyl transfer 97.3 0.35 7.6E-06 55.7 30.8 109 384-501 326-452 (456)
193 PF12000 Glyco_trans_4_3: Gkyc 97.3 0.0015 3.2E-08 63.7 9.4 148 90-275 19-170 (171)
194 TIGR01497 kdpB K+-transporting 97.2 0.0023 4.9E-08 76.1 12.5 54 612-669 426-485 (675)
195 PLN02863 UDP-glucoronosyl/UDP- 97.2 0.58 1.3E-05 54.2 31.8 171 312-503 283-470 (477)
196 TIGR01681 HAD-SF-IIIC HAD-supe 97.2 0.00053 1.1E-08 64.3 5.7 52 613-668 1-68 (128)
197 PLN02645 phosphoglycolate phos 97.2 0.00082 1.8E-08 73.4 7.7 65 611-680 27-96 (311)
198 TIGR01458 HAD-SF-IIA-hyp3 HAD- 97.2 0.00024 5.2E-09 75.3 3.4 64 613-681 2-74 (257)
199 TIGR01106 ATPase-IIC_X-K sodiu 97.2 0.0038 8.3E-08 78.9 14.7 41 625-669 567-607 (997)
200 PF07429 Glyco_transf_56: 4-al 97.2 0.11 2.4E-06 55.8 22.9 144 312-469 184-331 (360)
201 PF02684 LpxB: Lipid-A-disacch 97.2 0.024 5.1E-07 62.9 19.0 145 309-477 180-346 (373)
202 COG1817 Uncharacterized protei 97.2 0.09 2E-06 55.2 21.6 137 302-473 171-316 (346)
203 COG3660 Predicted nucleoside-d 97.1 0.14 2.9E-06 52.4 21.8 202 142-440 68-276 (329)
204 COG0763 LpxB Lipid A disacchar 97.1 0.058 1.3E-06 58.7 20.7 243 143-481 84-354 (381)
205 TIGR01662 HAD-SF-IIIA HAD-supe 97.0 0.00098 2.1E-08 62.9 5.1 53 613-669 1-72 (132)
206 PLN02764 glycosyltransferase f 96.9 1.3 2.8E-05 50.8 31.4 115 384-507 319-448 (453)
207 PLN02954 phosphoserine phospha 96.9 0.005 1.1E-07 63.9 9.9 43 794-841 152-194 (224)
208 TIGR01525 ATPase-IB_hvy heavy 96.8 0.0049 1.1E-07 73.1 10.5 55 611-669 363-424 (556)
209 PRK13225 phosphoglycolate phos 96.8 0.013 2.9E-07 62.5 12.7 42 797-841 196-237 (273)
210 TIGR01511 ATPase-IB1_Cu copper 96.8 0.0064 1.4E-07 72.0 11.2 54 612-669 385-444 (562)
211 PF11997 DUF3492: Domain of un 96.8 0.069 1.5E-06 56.7 17.6 88 143-232 171-262 (268)
212 TIGR01522 ATPase-IIA2_Ca golgi 96.8 0.013 2.8E-07 73.4 14.1 56 611-670 502-568 (884)
213 TIGR01524 ATPase-IIIB_Mg magne 96.8 0.012 2.7E-07 73.1 13.9 42 624-669 513-554 (867)
214 TIGR01116 ATPase-IIA1_Ca sarco 96.8 0.0066 1.4E-07 76.2 11.3 41 625-669 536-576 (917)
215 PRK10517 magnesium-transportin 96.8 0.012 2.7E-07 73.2 13.5 42 624-669 548-589 (902)
216 TIGR01664 DNA-3'-Pase DNA 3'-p 96.7 0.0028 6.1E-08 62.2 6.2 64 611-681 12-102 (166)
217 PRK13223 phosphoglycolate phos 96.7 0.0022 4.8E-08 68.6 6.0 51 792-845 153-204 (272)
218 TIGR01517 ATPase-IIB_Ca plasma 96.7 0.013 2.9E-07 73.7 13.6 43 624-670 577-619 (941)
219 TIGR01647 ATPase-IIIA_H plasma 96.7 0.014 3.1E-07 71.6 13.4 55 612-670 417-482 (755)
220 PRK01122 potassium-transportin 96.7 0.0098 2.1E-07 71.0 11.5 54 612-669 425-484 (679)
221 COG0647 NagD Predicted sugar p 96.7 0.023 5E-07 59.7 12.9 66 610-680 6-77 (269)
222 PLN00414 glycosyltransferase f 96.7 1.8 3.9E-05 49.8 33.5 113 384-505 314-441 (446)
223 TIGR01452 PGP_euk phosphoglyco 96.7 0.0023 5.1E-08 68.8 5.7 64 612-680 2-70 (279)
224 PLN03004 UDP-glycosyltransfera 96.7 0.91 2E-05 52.1 26.8 142 312-473 270-426 (451)
225 PLN02554 UDP-glycosyltransfera 96.7 2 4.3E-05 50.1 33.2 111 382-502 342-476 (481)
226 PF13344 Hydrolase_6: Haloacid 96.6 0.0033 7.1E-08 56.1 5.3 52 615-670 1-57 (101)
227 PRK01021 lpxB lipid-A-disaccha 96.6 0.2 4.4E-06 58.3 21.0 243 143-484 309-584 (608)
228 PRK15122 magnesium-transportin 96.6 0.017 3.7E-07 72.1 13.3 42 624-669 548-589 (903)
229 PRK11033 zntA zinc/cadmium/mer 96.6 0.01 2.2E-07 72.6 11.1 55 611-669 547-607 (741)
230 TIGR01523 ATPase-IID_K-Na pota 96.5 0.0085 1.8E-07 75.8 10.2 42 625-670 645-686 (1053)
231 PLN02152 indole-3-acetate beta 96.5 2.5 5.4E-05 48.7 28.5 146 312-473 261-419 (455)
232 PRK11590 hypothetical protein; 96.4 0.018 3.9E-07 59.2 10.1 49 788-842 154-202 (211)
233 PF12038 DUF3524: Domain of un 96.4 0.0082 1.8E-07 57.3 6.6 79 143-233 58-137 (168)
234 PLN00164 glucosyltransferase; 96.4 2.9 6.2E-05 48.7 34.7 81 383-472 340-432 (480)
235 PF08235 LNS2: LNS2 (Lipin/Ned 96.4 0.0072 1.6E-07 57.8 6.2 50 614-667 1-67 (157)
236 PRK14010 potassium-transportin 96.4 0.022 4.7E-07 68.0 11.5 53 613-669 422-480 (673)
237 COG0058 GlgP Glucan phosphoryl 96.3 0.038 8.2E-07 65.3 13.0 190 309-507 483-685 (750)
238 PF08288 PIGA: PIGA (GPI ancho 96.2 0.012 2.6E-07 49.4 5.7 36 143-178 49-86 (90)
239 PLN02167 UDP-glycosyltransfera 96.1 3.9 8.5E-05 47.5 32.7 170 312-502 280-470 (475)
240 COG2217 ZntA Cation transport 96.1 0.019 4.2E-07 68.6 9.3 52 614-669 519-576 (713)
241 TIGR01512 ATPase-IB2_Cd heavy 96.1 0.02 4.3E-07 67.6 9.4 53 613-669 343-402 (536)
242 KOG1615 Phosphoserine phosphat 96.1 0.014 3E-07 56.5 6.5 40 797-841 159-198 (227)
243 TIGR01672 AphA HAD superfamily 96.1 0.023 4.9E-07 59.0 8.5 36 631-670 119-158 (237)
244 TIGR01675 plant-AP plant acid 96.0 0.019 4.1E-07 58.8 7.6 55 611-669 76-162 (229)
245 TIGR01657 P-ATPase-V P-type AT 96.0 0.04 8.7E-07 70.3 12.0 41 625-669 655-695 (1054)
246 TIGR01490 HAD-SF-IB-hyp1 HAD-s 96.0 0.03 6.5E-07 57.0 8.9 47 794-843 152-198 (202)
247 PF06258 Mito_fiss_Elm1: Mitoc 95.9 0.41 9E-06 52.0 17.9 194 143-439 56-259 (311)
248 PRK14986 glycogen phosphorylas 95.9 0.093 2E-06 63.0 13.7 140 309-454 539-694 (815)
249 COG0474 MgtA Cation transport 95.9 0.026 5.7E-07 70.6 9.7 43 624-670 545-587 (917)
250 PRK13222 phosphoglycolate phos 95.9 0.03 6.5E-07 58.1 8.7 46 797-845 150-196 (226)
251 PLN03015 UDP-glucosyl transfer 95.9 4.8 0.0001 46.4 31.1 78 384-470 337-425 (470)
252 PRK13226 phosphoglycolate phos 95.8 0.033 7.1E-07 58.0 8.5 40 798-840 153-192 (229)
253 TIGR01460 HAD-SF-IIA Haloacid 95.8 0.0086 1.9E-07 62.7 4.1 65 615-684 1-71 (236)
254 TIGR01459 HAD-SF-IIA-hyp4 HAD- 95.7 0.016 3.6E-07 60.8 5.9 66 611-680 7-76 (242)
255 TIGR01489 DKMTPPase-SF 2,3-dik 95.7 0.085 1.8E-06 52.8 10.7 42 792-839 144-185 (188)
256 TIGR01656 Histidinol-ppas hist 95.6 0.019 4E-07 55.3 5.4 53 613-669 1-81 (147)
257 cd04300 GT1_Glycogen_Phosphory 95.6 0.15 3.2E-06 61.4 13.7 140 309-454 526-681 (797)
258 TIGR01685 MDP-1 magnesium-depe 95.5 0.026 5.7E-07 55.6 6.1 54 612-669 2-85 (174)
259 PLN02555 limonoid glucosyltran 95.5 6.8 0.00015 45.4 33.6 82 382-472 337-430 (480)
260 PRK14985 maltodextrin phosphor 95.4 0.12 2.6E-06 61.8 11.9 140 309-454 525-680 (798)
261 TIGR01261 hisB_Nterm histidino 95.1 0.043 9.4E-07 53.5 6.2 55 612-670 1-84 (161)
262 PRK08942 D,D-heptose 1,7-bisph 95.0 0.044 9.5E-07 54.7 6.2 42 611-656 2-55 (181)
263 TIGR01663 PNK-3'Pase polynucle 95.0 0.046 1E-06 63.3 6.7 66 609-681 165-257 (526)
264 PF00343 Phosphorylase: Carboh 94.8 0.43 9.3E-06 56.7 14.2 140 309-454 440-595 (713)
265 TIGR02093 P_ylase glycogen/sta 94.8 0.21 4.5E-06 59.9 11.7 140 309-454 523-678 (794)
266 PRK10826 2-deoxyglucose-6-phos 94.8 0.28 6.1E-06 50.7 11.6 45 795-842 147-191 (222)
267 TIGR01533 lipo_e_P4 5'-nucleot 94.8 0.094 2E-06 55.3 8.0 67 610-680 73-171 (266)
268 TIGR00213 GmhB_yaeD D,D-heptos 94.6 0.065 1.4E-06 53.3 5.9 40 613-656 2-52 (176)
269 KOG0202 Ca2+ transporting ATPa 94.5 0.29 6.2E-06 57.9 11.6 55 610-669 569-623 (972)
270 TIGR01668 YqeG_hyp_ppase HAD s 94.5 0.08 1.7E-06 52.3 6.4 55 611-669 24-83 (170)
271 TIGR01491 HAD-SF-IB-PSPlk HAD- 94.5 0.027 6E-07 57.1 3.1 46 796-844 146-191 (201)
272 PRK13288 pyrophosphatase PpaX; 94.4 0.27 5.9E-06 50.4 10.5 45 793-840 135-179 (214)
273 PF04101 Glyco_tran_28_C: Glyc 94.4 0.047 1E-06 53.7 4.6 89 382-480 55-153 (167)
274 PHA02530 pseT polynucleotide k 94.4 0.054 1.2E-06 59.0 5.3 56 610-669 156-226 (300)
275 TIGR01686 FkbH FkbH-like domai 94.0 0.13 2.7E-06 56.6 7.1 55 611-669 2-74 (320)
276 PRK11009 aphA acid phosphatase 93.9 0.27 5.9E-06 51.1 9.0 35 631-669 119-157 (237)
277 COG2179 Predicted hydrolase of 93.8 0.21 4.5E-06 47.7 7.1 57 610-670 26-86 (175)
278 PRK08238 hypothetical protein; 93.6 0.19 4.1E-06 58.0 8.0 48 629-684 75-122 (479)
279 PLN02575 haloacid dehalogenase 93.6 0.59 1.3E-05 51.9 11.4 42 797-841 273-314 (381)
280 smart00577 CPDc catalytic doma 93.4 0.19 4E-06 48.4 6.4 54 611-669 1-83 (148)
281 COG4370 Uncharacterized protei 93.3 0.47 1E-05 49.5 9.3 140 322-487 237-395 (412)
282 COG0546 Gph Predicted phosphat 93.3 0.21 4.5E-06 51.6 7.1 43 798-843 147-192 (220)
283 KOG0203 Na+/K+ ATPase, alpha s 93.3 0.47 1E-05 56.2 10.4 166 626-874 590-755 (1019)
284 PRK05446 imidazole glycerol-ph 93.2 0.17 3.6E-06 55.8 6.5 55 611-669 1-84 (354)
285 PLN02534 UDP-glycosyltransfera 93.1 21 0.00046 41.5 35.7 78 382-470 344-443 (491)
286 PLN02779 haloacid dehalogenase 93.1 0.23 5E-06 53.6 7.3 41 799-842 205-245 (286)
287 PRK14089 ipid-A-disaccharide s 93.1 2.2 4.9E-05 47.1 15.0 92 313-436 168-261 (347)
288 PRK06769 hypothetical protein; 93.1 0.18 4E-06 49.8 5.9 54 612-669 4-75 (173)
289 TIGR02137 HSK-PSP phosphoserin 93.0 0.13 2.9E-06 52.2 5.0 53 794-856 129-181 (203)
290 PF03033 Glyco_transf_28: Glyc 92.8 0.12 2.6E-06 48.9 4.1 121 27-177 7-131 (139)
291 PLN03243 haloacid dehalogenase 92.8 0.17 3.6E-06 53.8 5.4 34 646-680 125-158 (260)
292 TIGR01491 HAD-SF-IB-PSPlk HAD- 92.4 0.34 7.3E-06 49.0 7.1 34 632-669 86-119 (201)
293 PRK09552 mtnX 2-hydroxy-3-keto 92.2 0.29 6.3E-06 50.5 6.3 38 796-840 147-184 (219)
294 TIGR01456 CECR5 HAD-superfamil 92.1 0.24 5.3E-06 54.4 5.9 53 614-670 2-64 (321)
295 TIGR01680 Veg_Stor_Prot vegeta 92.1 0.47 1E-05 49.7 7.5 55 612-670 101-188 (275)
296 PF00201 UDPGT: UDP-glucoronos 92.0 0.43 9.2E-06 56.1 8.3 87 382-477 323-415 (500)
297 PF04464 Glyphos_transf: CDP-G 92.0 1.4 3.1E-05 49.4 12.2 110 379-502 249-367 (369)
298 PF08645 PNK3P: Polynucleotide 91.9 0.13 2.8E-06 50.1 3.1 53 613-669 1-82 (159)
299 TIGR01488 HAD-SF-IB Haloacid D 91.8 0.088 1.9E-06 52.1 1.8 42 791-835 136-177 (177)
300 PRK10422 lipopolysaccharide co 91.6 26 0.00056 38.9 23.7 104 312-436 183-288 (352)
301 PF11440 AGT: DNA alpha-glucos 91.6 12 0.00025 39.1 16.4 145 312-472 179-354 (355)
302 PF05152 DUF705: Protein of un 90.9 0.83 1.8E-05 47.7 7.8 67 610-681 120-192 (297)
303 PF10933 DUF2827: Protein of u 90.5 30 0.00066 37.8 21.7 110 369-491 238-350 (364)
304 TIGR02253 CTE7 HAD superfamily 90.5 2.1 4.6E-05 43.9 10.8 43 798-843 152-196 (221)
305 TIGR01488 HAD-SF-IB Haloacid D 90.5 0.39 8.5E-06 47.4 5.1 36 630-669 77-112 (177)
306 PLN02770 haloacid dehalogenase 90.5 2.9 6.4E-05 44.0 12.0 41 797-840 165-205 (248)
307 COG0637 Predicted phosphatase/ 90.4 0.35 7.7E-06 49.9 4.8 37 630-670 90-126 (221)
308 PF12710 HAD: haloacid dehalog 90.3 0.37 7.9E-06 48.3 4.7 38 629-670 92-129 (192)
309 TIGR02137 HSK-PSP phosphoserin 90.1 0.48 1E-05 48.2 5.3 37 629-670 71-107 (203)
310 PF12689 Acid_PPase: Acid Phos 89.7 0.42 9.2E-06 46.7 4.4 54 612-669 3-85 (169)
311 TIGR01428 HAD_type_II 2-haloal 89.7 2.9 6.4E-05 42.1 10.8 41 798-841 150-190 (198)
312 PRK13582 thrH phosphoserine ph 89.3 0.78 1.7E-05 46.6 6.3 40 797-843 132-171 (205)
313 PF03767 Acid_phosphat_B: HAD 89.0 0.26 5.6E-06 51.1 2.4 55 611-669 71-157 (229)
314 COG3882 FkbH Predicted enzyme 88.9 1.5 3.4E-05 48.8 8.3 55 609-667 219-292 (574)
315 PLN02940 riboflavin kinase 88.9 0.73 1.6E-05 51.8 6.2 45 632-681 99-144 (382)
316 PF09419 PGP_phosphatase: Mito 88.6 1.3 2.8E-05 43.2 6.8 60 609-670 38-108 (168)
317 PF03031 NIF: NLI interacting 88.2 0.86 1.9E-05 44.3 5.5 52 613-669 1-74 (159)
318 PTZ00445 p36-lilke protein; Pr 87.6 1.1 2.4E-05 45.0 5.7 44 792-838 157-200 (219)
319 PLN02207 UDP-glycosyltransfera 87.4 11 0.00023 43.7 14.4 168 312-505 275-466 (468)
320 KOG4626 O-linked N-acetylgluco 85.3 13 0.00027 43.1 12.9 182 305-507 751-943 (966)
321 PLN03190 aminophospholipid tra 85.0 6.2 0.00013 50.9 11.9 41 625-669 725-765 (1178)
322 PF04413 Glycos_transf_N: 3-De 84.3 6.3 0.00014 39.4 9.4 73 143-232 94-166 (186)
323 COG4996 Predicted phosphatase 84.3 2.3 4.9E-05 38.8 5.4 61 613-678 1-88 (164)
324 TIGR02245 HAD_IIID1 HAD-superf 83.9 2 4.3E-05 43.1 5.6 56 609-669 18-83 (195)
325 KOG2116 Protein involved in pl 83.5 1.7 3.6E-05 50.2 5.3 69 611-688 529-614 (738)
326 COG1703 ArgK Putative periplas 83.3 62 0.0013 34.6 16.2 121 27-181 60-180 (323)
327 KOG0210 P-type ATPase [Inorgan 83.2 7.5 0.00016 45.4 10.2 39 797-841 768-806 (1051)
328 PF08660 Alg14: Oligosaccharid 82.9 5.2 0.00011 39.3 7.9 30 143-172 91-126 (170)
329 TIGR01652 ATPase-Plipid phosph 82.8 8.7 0.00019 49.5 12.1 41 625-669 630-670 (1057)
330 PF13242 Hydrolase_like: HAD-h 81.1 1.8 4E-05 35.9 3.5 43 800-845 8-52 (75)
331 PF06437 ISN1: IMP-specific 5' 81.1 4.1 8.9E-05 44.4 6.8 197 611-823 146-378 (408)
332 COG0241 HisB Histidinol phosph 80.0 1.6 3.5E-05 43.0 3.2 36 798-836 107-142 (181)
333 TIGR02250 FCP1_euk FCP1-like p 79.5 4.4 9.6E-05 39.2 6.1 56 609-669 3-96 (156)
334 COG4359 Uncharacterized conser 78.9 5.1 0.00011 39.0 6.0 55 627-689 74-132 (220)
335 PF06925 MGDG_synth: Monogalac 78.5 11 0.00024 36.9 8.8 63 143-232 88-154 (169)
336 KOG0204 Calcium transporting A 77.4 12 0.00026 45.0 9.6 40 626-669 647-686 (1034)
337 COG4087 Soluble P-type ATPase 75.8 3.8 8.2E-05 37.5 4.0 27 812-841 92-118 (152)
338 PF06941 NT5C: 5' nucleotidase 74.6 2.7 5.9E-05 42.2 3.3 35 629-667 76-117 (191)
339 TIGR02251 HIF-SF_euk Dullard-l 73.8 5.4 0.00012 38.9 5.0 53 612-669 1-80 (162)
340 PF05159 Capsule_synth: Capsul 73.7 25 0.00055 37.3 10.6 125 310-462 114-245 (269)
341 PF10087 DUF2325: Uncharacteri 73.5 7.4 0.00016 34.2 5.4 80 349-443 3-89 (97)
342 KOG3040 Predicted sugar phosph 73.2 1.1E+02 0.0023 30.9 14.4 59 611-671 6-67 (262)
343 KOG0208 Cation transport ATPas 71.7 8.2 0.00018 47.0 6.6 41 625-669 704-744 (1140)
344 COG2327 WcaK Polysaccharide py 70.9 1.8E+02 0.0039 32.5 27.7 83 382-473 266-352 (385)
345 PF15024 Glyco_transf_18: Glyc 70.9 35 0.00076 39.6 11.1 107 383-504 323-455 (559)
346 COG4087 Soluble P-type ATPase 70.2 6.7 0.00014 36.0 4.2 50 616-670 18-69 (152)
347 TIGR03609 S_layer_CsaB polysac 68.6 1.7E+02 0.0038 31.4 16.7 39 388-435 237-275 (298)
348 PRK10725 fructose-1-P/6-phosph 67.6 6 0.00013 39.3 3.9 40 797-839 143-182 (188)
349 COG5083 SMP2 Uncharacterized p 66.5 3.9 8.3E-05 45.0 2.3 68 609-688 372-453 (580)
350 TIGR01548 HAD-SF-IA-hyp1 haloa 66.4 11 0.00023 38.0 5.5 45 631-680 111-155 (197)
351 TIGR01545 YfhB_g-proteo haloac 65.9 4.8 0.0001 41.1 2.8 46 791-842 156-201 (210)
352 PF00702 Hydrolase: haloacid d 65.8 3.2 6.9E-05 42.2 1.5 33 801-836 183-215 (215)
353 PF03016 Exostosin: Exostosin 65.6 5.5 0.00012 43.1 3.4 70 393-466 228-300 (302)
354 PF00702 Hydrolase: haloacid d 65.6 9.2 0.0002 38.7 4.9 52 614-669 109-166 (215)
355 KOG1192 UDP-glucuronosyl and U 65.3 29 0.00062 40.6 9.7 113 381-503 334-454 (496)
356 TIGR02193 heptsyl_trn_I lipopo 65.2 68 0.0015 34.9 12.1 100 312-436 179-280 (319)
357 PLN02770 haloacid dehalogenase 64.0 12 0.00026 39.3 5.5 48 629-681 111-158 (248)
358 TIGR02195 heptsyl_trn_II lipop 63.8 46 0.001 36.5 10.4 104 308-435 169-276 (334)
359 COG0546 Gph Predicted phosphat 63.7 13 0.00029 38.2 5.7 45 630-679 93-137 (220)
360 PRK13582 thrH phosphoserine ph 63.7 3.9 8.4E-05 41.4 1.7 12 613-624 2-13 (205)
361 cd03789 GT1_LPS_heptosyltransf 63.1 35 0.00076 36.4 9.1 100 314-436 123-224 (279)
362 PF06888 Put_Phosphatase: Puta 63.0 27 0.00058 36.2 7.6 49 792-842 145-196 (234)
363 TIGR01449 PGP_bact 2-phosphogl 62.6 4.6 0.0001 41.1 2.0 41 798-841 143-183 (213)
364 KOG0853 Glycosyltransferase [C 61.0 13 0.00028 42.6 5.3 32 26-59 44-84 (495)
365 PRK13288 pyrophosphatase PpaX; 60.5 13 0.00028 37.9 5.0 47 628-679 84-130 (214)
366 TIGR03333 salvage_mtnX 2-hydro 59.4 7.3 0.00016 39.9 2.8 41 795-842 142-182 (214)
367 KOG1021 Acetylglucosaminyltran 58.4 69 0.0015 37.1 10.8 72 392-470 334-408 (464)
368 TIGR01449 PGP_bact 2-phosphogl 58.3 19 0.00041 36.5 5.7 47 629-680 88-134 (213)
369 TIGR01454 AHBA_synth_RP 3-amin 57.6 13 0.00029 37.5 4.4 39 628-670 77-115 (205)
370 TIGR02253 CTE7 HAD superfamily 55.4 15 0.00032 37.6 4.3 48 628-680 96-143 (221)
371 PRK09739 hypothetical protein; 54.1 20 0.00043 36.2 4.9 40 1-55 1-41 (199)
372 PHA02597 30.2 hypothetical pro 54.0 6.6 0.00014 39.5 1.4 39 797-840 131-171 (197)
373 PF13419 HAD_2: Haloacid dehal 53.6 13 0.00028 35.9 3.5 48 628-680 79-126 (176)
374 PF01075 Glyco_transf_9: Glyco 53.5 72 0.0016 33.1 9.3 103 311-436 104-209 (247)
375 TIGR01662 HAD-SF-IIIA HAD-supe 53.4 39 0.00085 31.2 6.5 40 797-839 86-127 (132)
376 TIGR01422 phosphonatase phosph 52.3 19 0.00041 37.8 4.7 47 629-680 102-149 (253)
377 TIGR01454 AHBA_synth_RP 3-amin 51.8 9.8 0.00021 38.5 2.3 41 797-840 132-172 (205)
378 TIGR01544 HAD-SF-IE haloacid d 51.6 14 0.00031 39.3 3.4 38 795-835 190-230 (277)
379 PRK10964 ADP-heptose:LPS hepto 51.5 1.3E+02 0.0028 32.9 11.2 46 382-436 234-279 (322)
380 PF01975 SurE: Survival protei 51.4 23 0.00051 35.6 4.8 39 4-60 1-39 (196)
381 PRK10826 2-deoxyglucose-6-phos 51.3 23 0.00049 36.4 4.9 48 628-680 94-141 (222)
382 PRK09449 dUMP phosphatase; Pro 51.1 12 0.00026 38.4 2.9 41 798-841 152-194 (224)
383 PRK10748 flavin mononucleotide 51.0 11 0.00024 39.3 2.6 26 613-638 11-39 (238)
384 PLN02575 haloacid dehalogenase 51.0 20 0.00044 40.0 4.7 47 629-680 219-265 (381)
385 COG2216 KdpB High-affinity K+ 50.1 8.5 0.00018 43.5 1.5 57 789-856 491-547 (681)
386 TIGR03351 PhnX-like phosphonat 49.5 22 0.00048 36.3 4.5 38 628-669 89-126 (220)
387 TIGR02254 YjjG/YfnB HAD superf 49.4 15 0.00032 37.6 3.2 41 798-841 154-196 (224)
388 PRK13222 phosphoglycolate phos 49.2 30 0.00064 35.4 5.4 47 628-679 95-141 (226)
389 TIGR01428 HAD_type_II 2-haloal 48.5 25 0.00055 35.2 4.7 47 629-680 95-141 (198)
390 TIGR00715 precor6x_red precorr 48.5 77 0.0017 33.4 8.3 87 373-469 165-255 (256)
391 PRK09552 mtnX 2-hydroxy-3-keto 48.0 11 0.00024 38.7 2.0 36 629-669 77-112 (219)
392 TIGR01261 hisB_Nterm histidino 47.8 9.7 0.00021 37.1 1.4 44 796-842 103-146 (161)
393 PF06888 Put_Phosphatase: Puta 47.2 31 0.00066 35.8 5.0 41 628-670 73-113 (234)
394 KOG0207 Cation transport ATPas 46.9 19 0.00041 43.8 3.8 49 788-845 766-814 (951)
395 TIGR02009 PGMB-YQAB-SF beta-ph 46.1 21 0.00047 35.1 3.7 46 627-679 89-134 (185)
396 TIGR01656 Histidinol-ppas hist 46.0 31 0.00066 32.8 4.6 42 796-840 101-142 (147)
397 TIGR02201 heptsyl_trn_III lipo 45.1 1.1E+02 0.0025 33.6 9.7 103 313-436 182-286 (344)
398 PRK13223 phosphoglycolate phos 43.9 31 0.00067 36.8 4.7 47 629-680 104-150 (272)
399 TIGR03351 PhnX-like phosphonat 43.9 13 0.00028 38.0 1.8 40 798-840 147-187 (220)
400 KOG3120 Predicted haloacid deh 43.7 27 0.00058 35.3 3.7 51 790-842 156-209 (256)
401 PRK13225 phosphoglycolate phos 43.5 33 0.00072 36.6 4.8 47 628-679 144-190 (273)
402 PRK10563 6-phosphogluconate ph 43.0 24 0.00052 36.1 3.6 44 797-843 143-186 (221)
403 KOG0206 P-type ATPase [General 42.8 20 0.00043 45.5 3.3 40 626-669 651-690 (1151)
404 PRK00207 sulfur transfer compl 41.8 38 0.00082 31.5 4.3 39 4-56 1-40 (128)
405 TIGR01509 HAD-SF-IA-v3 haloaci 41.7 40 0.00087 33.0 4.9 47 628-680 87-133 (183)
406 COG1887 TagB Putative glycosyl 40.8 5.3E+02 0.012 29.1 14.0 99 392-502 277-384 (388)
407 COG4030 Uncharacterized protei 40.8 29 0.00064 35.0 3.5 35 797-835 191-225 (315)
408 cd07944 DRE_TIM_HOA_like 4-hyd 40.1 4.8E+02 0.01 27.6 13.8 126 324-469 104-239 (266)
409 KOG1618 Predicted phosphatase 40.1 22 0.00049 37.8 2.7 59 612-670 35-99 (389)
410 TIGR01494 ATPase_P-type ATPase 40.1 22 0.00048 41.7 3.1 39 797-842 394-432 (499)
411 PRK13226 phosphoglycolate phos 38.9 61 0.0013 33.4 5.8 47 629-680 98-144 (229)
412 PF04392 ABC_sub_bind: ABC tra 38.0 93 0.002 33.5 7.3 100 326-436 115-218 (294)
413 PRK13478 phosphonoacetaldehyde 37.9 46 0.00099 35.3 4.8 37 629-669 104-140 (267)
414 COG3700 AphA Acid phosphatase 37.2 87 0.0019 30.5 5.9 33 627-663 115-147 (237)
415 PRK14988 GMP/IMP nucleotidase; 37.2 42 0.00092 34.5 4.3 47 629-680 96-142 (224)
416 PRK11590 hypothetical protein; 37.1 57 0.0012 33.2 5.2 46 630-681 99-145 (211)
417 COG2120 Uncharacterized protei 35.7 85 0.0018 32.7 6.3 39 3-58 10-48 (237)
418 TIGR01990 bPGM beta-phosphoglu 35.1 21 0.00045 35.2 1.6 40 797-839 142-181 (185)
419 TIGR01494 ATPase_P-type ATPase 35.0 77 0.0017 37.2 6.5 54 612-669 327-386 (499)
420 TIGR03333 salvage_mtnX 2-hydro 35.0 69 0.0015 32.6 5.4 39 627-669 71-109 (214)
421 PRK06698 bifunctional 5'-methy 34.8 57 0.0012 37.8 5.3 46 629-679 333-378 (459)
422 PRK10916 ADP-heptose:LPS hepto 34.3 1.6E+02 0.0035 32.5 8.7 103 313-435 181-286 (348)
423 TIGR02244 HAD-IG-Ncltidse HAD 34.0 75 0.0016 35.1 5.7 37 628-668 186-223 (343)
424 PRK08942 D,D-heptose 1,7-bisph 33.7 25 0.00054 34.8 1.9 38 799-839 106-143 (181)
425 PRK06756 flavodoxin; Provision 33.6 57 0.0012 31.0 4.3 28 26-55 10-37 (148)
426 PRK11587 putative phosphatase; 33.5 61 0.0013 33.1 4.8 45 629-679 86-130 (218)
427 PF13419 HAD_2: Haloacid dehal 32.5 26 0.00055 33.8 1.7 41 797-840 134-174 (176)
428 COG0859 RfaF ADP-heptose:LPS h 32.5 1.8E+02 0.0038 32.1 8.5 99 313-436 176-277 (334)
429 TIGR01549 HAD-SF-IA-v1 haloaci 32.2 71 0.0015 30.3 4.7 44 630-679 68-111 (154)
430 COG0716 FldA Flavodoxins [Ener 31.7 67 0.0015 30.7 4.4 38 3-56 1-38 (151)
431 TIGR02254 YjjG/YfnB HAD superf 31.5 67 0.0014 32.7 4.7 46 629-680 100-145 (224)
432 TIGR01493 HAD-SF-IA-v2 Haloaci 31.1 38 0.00082 33.1 2.7 27 614-640 1-27 (175)
433 PLN02177 glycerol-3-phosphate 31.1 34 0.00074 39.8 2.6 43 794-843 173-215 (497)
434 COG2910 Putative NADH-flavin r 30.6 62 0.0013 32.0 3.8 34 4-58 1-34 (211)
435 TIGR01490 HAD-SF-IB-hyp1 HAD-s 30.4 23 0.00049 35.6 0.9 26 614-641 1-26 (202)
436 PF12710 HAD: haloacid dehalog 29.1 46 0.001 32.8 3.0 33 797-833 157-192 (192)
437 PRK07308 flavodoxin; Validated 28.8 74 0.0016 30.1 4.2 27 27-55 11-37 (146)
438 TIGR02009 PGMB-YQAB-SF beta-ph 28.1 34 0.00074 33.6 1.8 39 798-839 144-182 (185)
439 PRK10725 fructose-1-P/6-phosph 28.1 77 0.0017 31.2 4.4 43 632-680 93-135 (188)
440 PRK06698 bifunctional 5'-methy 27.9 40 0.00086 39.1 2.5 39 797-840 386-424 (459)
441 COG2503 Predicted secreted aci 27.9 1E+02 0.0022 31.9 4.9 58 609-670 76-166 (274)
442 TIGR01990 bPGM beta-phosphoglu 27.6 79 0.0017 31.0 4.3 46 628-680 89-134 (185)
443 PRK09449 dUMP phosphatase; Pro 27.5 77 0.0017 32.4 4.3 46 629-680 98-143 (224)
444 KOG0207 Cation transport ATPas 27.4 1.5E+02 0.0032 36.6 7.0 55 611-669 702-762 (951)
445 PRK13587 1-(5-phosphoribosyl)- 26.9 1.9E+02 0.0041 30.1 7.1 60 611-686 162-225 (234)
446 KOG3109 Haloacid dehalogenase- 26.9 89 0.0019 31.8 4.3 49 790-843 156-206 (244)
447 KOG4549 Magnesium-dependent ph 26.4 1.7E+02 0.0036 27.1 5.4 54 613-670 19-85 (144)
448 TIGR01509 HAD-SF-IA-v3 haloaci 25.7 58 0.0013 31.8 3.0 39 799-840 143-181 (183)
449 TIGR01545 YfhB_g-proteo haloac 25.4 1.3E+02 0.0028 30.7 5.4 46 629-680 97-143 (210)
450 KOG2884 26S proteasome regulat 25.1 4.7E+02 0.01 26.6 8.8 49 422-470 178-228 (259)
451 PLN02177 glycerol-3-phosphate 24.8 47 0.001 38.7 2.3 27 649-680 125-152 (497)
452 PRK02083 imidazole glycerol ph 24.8 8.1E+02 0.017 25.5 17.6 54 610-669 43-97 (253)
453 TIGR01549 HAD-SF-IA-v1 haloaci 24.8 42 0.00091 31.9 1.7 35 797-835 119-153 (154)
454 PF12996 DUF3880: DUF based on 24.7 1.9E+02 0.0041 24.2 5.4 43 212-279 15-57 (79)
455 PRK06249 2-dehydropantoate 2-r 24.3 62 0.0013 35.3 3.1 35 1-57 3-37 (313)
456 TIGR00213 GmhB_yaeD D,D-heptos 24.3 42 0.00092 33.0 1.6 39 798-839 108-146 (176)
457 TIGR02252 DREG-2 REG-2-like, H 24.1 1E+02 0.0023 30.8 4.5 46 629-680 108-153 (203)
458 TIGR01544 HAD-SF-IE haloacid d 24.1 1.2E+02 0.0026 32.4 4.9 40 627-670 122-161 (277)
459 KOG3120 Predicted haloacid deh 24.0 2.1E+02 0.0046 29.2 6.3 36 631-669 89-124 (256)
460 COG1090 Predicted nucleoside-d 24.0 69 0.0015 33.9 3.1 30 28-59 4-33 (297)
461 smart00577 CPDc catalytic doma 23.9 48 0.001 31.6 1.9 34 802-838 104-137 (148)
462 PRK11587 putative phosphatase; 23.8 69 0.0015 32.7 3.1 45 798-845 140-185 (218)
463 PRK08057 cobalt-precorrin-6x r 23.6 5.9E+02 0.013 26.7 10.0 77 383-469 170-247 (248)
464 PRK10563 6-phosphogluconate ph 23.5 49 0.0011 33.8 2.0 14 612-625 4-17 (221)
465 COG1011 Predicted hydrolase (H 23.4 45 0.00097 34.1 1.7 14 610-623 2-15 (229)
466 PRK08238 hypothetical protein; 23.2 1.1E+02 0.0024 35.6 4.9 45 793-845 124-168 (479)
467 KOG2134 Polynucleotide kinase 23.0 59 0.0013 35.8 2.4 41 609-653 72-127 (422)
468 cd03146 GAT1_Peptidase_E Type 22.7 4.9E+02 0.011 26.4 9.1 110 316-440 3-125 (212)
469 TIGR01361 DAHP_synth_Bsub phos 22.6 6E+02 0.013 26.8 10.0 110 319-436 29-139 (260)
470 COG2047 Uncharacterized protei 22.6 6.6E+02 0.014 25.7 9.3 79 382-470 133-213 (258)
471 COG0757 AroQ 3-dehydroquinate 22.6 3.2E+02 0.0068 25.7 6.6 68 365-434 28-97 (146)
472 PRK13015 3-dehydroquinate dehy 22.4 2.7E+02 0.0058 26.5 6.3 104 364-470 28-141 (146)
473 PRK05993 short chain dehydroge 22.3 1E+02 0.0023 32.6 4.3 37 1-57 1-37 (277)
474 PRK04531 acetylglutamate kinas 22.2 1.9E+02 0.0041 32.8 6.4 125 311-470 35-162 (398)
475 cd01020 TroA_b Metal binding p 22.1 5.1E+02 0.011 27.3 9.4 101 396-504 47-150 (264)
476 KOG2882 p-Nitrophenyl phosphat 22.1 1.5E+02 0.0031 31.8 5.0 53 614-670 24-81 (306)
477 PF11019 DUF2608: Protein of u 22.1 98 0.0021 32.6 3.9 32 793-825 158-189 (252)
478 PF04230 PS_pyruv_trans: Polys 21.8 8.6E+02 0.019 24.8 16.5 47 381-436 237-283 (286)
479 PRK14988 GMP/IMP nucleotidase; 21.6 52 0.0011 33.9 1.7 45 798-845 151-197 (224)
480 PRK05282 (alpha)-aspartyl dipe 21.4 6.3E+02 0.014 26.2 9.5 112 314-440 3-124 (233)
481 PRK10037 cell division protein 21.3 1E+02 0.0023 32.2 4.0 26 28-55 10-37 (250)
482 PF03358 FMN_red: NADPH-depend 21.1 1.6E+02 0.0035 27.8 5.0 38 4-56 1-39 (152)
483 PRK12342 hypothetical protein; 21.1 1.8E+02 0.0038 30.7 5.5 35 143-177 108-146 (254)
484 COG0482 TrmU Predicted tRNA(5- 21.1 1.1E+02 0.0024 33.7 4.0 27 28-58 11-37 (356)
485 PRK05632 phosphate acetyltrans 21.0 8.8E+02 0.019 29.7 12.3 24 30-55 15-38 (684)
486 PRK13396 3-deoxy-7-phosphohept 20.9 1.2E+03 0.025 26.0 11.9 113 311-436 98-215 (352)
487 PRK06769 hypothetical protein; 20.4 50 0.0011 32.4 1.2 41 798-841 95-135 (173)
488 TIGR01088 aroQ 3-dehydroquinat 20.2 3.2E+02 0.007 25.8 6.3 103 364-469 26-138 (141)
489 KOG2452 Formyltetrahydrofolate 20.1 1.5E+02 0.0032 33.2 4.7 32 4-57 1-32 (881)
490 PRK13398 3-deoxy-7-phosphohept 20.0 1.1E+03 0.023 25.1 12.3 110 316-436 28-141 (266)
491 PF05686 Glyco_transf_90: Glyc 20.0 2E+02 0.0043 32.6 6.0 89 421-509 229-325 (395)
No 1
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=5.9e-122 Score=1084.99 Aligned_cols=877 Identities=78% Similarity=1.256 Sum_probs=756.0
Q ss_pred eeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCccc
Q 002660 4 NNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 83 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~ 83 (895)
|||+|||+||++||+|+|+|||+|+||+.+||.+||++|+++||||+|+|+|++..+|.++++|+++.|.+.+...++++
T Consensus 170 ~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~~~~~~~~~~ 249 (1050)
T TIGR02468 170 LYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEMLTPRSSENDG 249 (1050)
T ss_pred eEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCcccccccccccccc
Confidence 89999999999999999999999999999999999999999999999999999998888999999999999877777777
Q ss_pred ccCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHh
Q 002660 84 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLS 163 (895)
Q Consensus 84 ~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~ 163 (895)
+++...+|++|+|+|++|..+|++++.+|+++..|.+.++.++.++.+.|.+++..+++..|||||+|||+++++++.++
T Consensus 250 ~~~~~~~g~rIvRip~GP~~~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaHyw~sG~aa~~L~ 329 (1050)
T TIGR02468 250 DEMGESSGAYIIRIPFGPRDKYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHYADAGDSAALLS 329 (1050)
T ss_pred ccccCCCCeEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEECcchHHHHHHHHH
Confidence 88888899999999999985699999999999999999999988877888887766555679999999999999999999
Q ss_pred ccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHH
Q 002660 164 GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 243 (895)
Q Consensus 164 ~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~ 243 (895)
+.+++|+|+|+|+++..++.+++..|..+...+...|++.+++.+|+.++..||.||++|.+++++|++.|..+++.+.+
T Consensus 330 ~~lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~~lY~~~~~~~~~ 409 (1050)
T TIGR02468 330 GALNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWGLYDGFDVILER 409 (1050)
T ss_pred HhhCCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHHHHHHHHHHhccCCchhhh
Confidence 99999999999999999988888777655666777788899999999999999999999999999999999999999999
Q ss_pred HHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCC
Q 002660 244 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD 323 (895)
Q Consensus 244 ~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~ 323 (895)
+||+|+.+||.++|++++++.|||||||++.|.|....................+..+..+++++..+++++|+++||+.
T Consensus 410 ~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~~~~l~r~~~~pdkpvIL~VGRL~ 489 (1050)
T TIGR02468 410 KLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPIWSEIMRFFTNPRKPMILALARPD 489 (1050)
T ss_pred hhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccchhhHHHHhhcccCCCcEEEEEcCCc
Confidence 99999999999999999999999999999999985433211111000011123445667788888889999999999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhh
Q 002660 324 PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAA 403 (895)
Q Consensus 324 ~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~ 403 (895)
++||++.||+||..+..+.+.+++.+|+|++++.+.+......+..++..+++++++.++|.|+|+++.++++.+|+.|+
T Consensus 490 p~KGi~~LIeAf~~L~~l~~~~nL~LIiG~gdd~d~l~~~~~~~l~~L~~li~~lgL~g~V~FlG~v~~edvp~lYr~Ad 569 (1050)
T TIGR02468 490 PKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSSGSSSVLTSVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAA 569 (1050)
T ss_pred cccCHHHHHHHHHHhHhhccCCCEEEEEecCchhhhhhccchHHHHHHHHHHHHhCCCCeEEecCCCCHHHHHHHHHHhh
Confidence 99999999999999975555667877889888777666666677889999999999999999999999999999999995
Q ss_pred cCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 002660 404 KTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGL 483 (895)
Q Consensus 404 ~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~ 483 (895)
.+.||||+||++||||++++||||||+|||+|+.||+.|++.++.+|++|+|.|+++|+++|.+++++++.+++++++++
T Consensus 570 ~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~Dpelr~~m~~~gr 649 (1050)
T TIGR02468 570 KTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVADKQLWAECRQNGL 649 (1050)
T ss_pred hcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCCcEEEECCCCHHHHHHHHHHHhhCHHHHHHHHHHHH
Confidence 55679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCHHHHHHHHHHHHHcccCCCCCCCCCC-CCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCccc
Q 002660 484 KNIHLFSWPEHCKTYLSRIAGCKPRHPQWQRND-DGGETSESDSPGDSLRDIQDISLNLKFSLDGEKSGASGNDDSLDSE 562 (895)
Q Consensus 484 ~~~~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (895)
+.+++|||+.++++|++.+..+..++++|+... .+.+.+++++|.++++++++++++++++.|....+.+.|. ..+
T Consensus 650 ~~v~~FSWe~ia~~yl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~ 726 (1050)
T TIGR02468 650 KNIHLFSWPEHCKTYLSRIASCRPRHPQWQRDTDDGEEASEDESPGDSLRDIQDISLNLSVDGDKESNNGSSNV---EGS 726 (1050)
T ss_pred HHHHHCCHHHHHHHHHHHHHHHhccCcccccccccccccccccCccccccccccchhhcccccccccccccccc---ccc
Confidence 999889999999999999999999888887632 2345667889999999999999555554444444432222 245
Q ss_pred CcchhhhhHHHHHHHHhhccccccccCCCCCccccccCcCCCCccccccCeEEE--EEecCCCCcchhHHHHHHHHHHHh
Q 002660 563 GNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALRRRKHIFV--ISVDCDSTTGLLDATKKICEAVEK 640 (895)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~--~DiDGTL~~~~~~~~~~~l~~l~~ 640 (895)
+++.++...+...+.++.+++ .+++++.+++++..++|.++++++||+ +|+|.| ....+.++++++++++
T Consensus 727 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~via~D~d~~--~~~~~~l~~~~~~~~~ 798 (1050)
T TIGR02468 727 GPPADRVAKIENAVRSWSKSP------KGSSAKAQQGSGAGKYPALRRRKRLFVIAVDCYDD--KDLLQIIKNIFEAVRK 798 (1050)
T ss_pred cchhhHHHHHHHHHhhccccc------cccccccccccccccCccccccceEEEEEeccCCC--CChHHHHHHHHHHHhc
Confidence 566677766666766666433 268888999999999999899999999 788887 4467788888888874
Q ss_pred hccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeeccCC-CCCCCcccchhhHHHhhcccCcchHHHH
Q 002660 641 ERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTLN-SEDGPFVVDFYYHSHIEYRWGGEGLRKT 719 (895)
Q Consensus 641 ~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 719 (895)
....+.+.|+|+|||++.++.+++++.++++..||++||+.|++|||...+ .+...+..|..|..+|.+.|..+.++..
T Consensus 799 ~~~~~~igfv~aTGR~l~~~~~~l~~~~lp~~~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~~ 878 (1050)
T TIGR02468 799 ERMEGSSGFILSTSMTISEIQSFLKSGGLNPTDFDALICNSGSELYYPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKT 878 (1050)
T ss_pred cccCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCcceeccCcCCCCCCCceECHHHHHHHHccCCcHHHHHH
Confidence 211246999999999999999999999995337999999999999997321 2234678889999999999999999988
Q ss_pred HHhhhhhccccccccCCcccccccccCCceEEEEEeeCCCCCccHHHHHHHHHhccCeEEEEEecCCeeEEeecCCCChH
Q 002660 720 LVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRS 799 (895)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg 799 (895)
+..++....+.+.........+....+..||++|++.++...+.++++++.|+..+..++++++++..+|||+|.++|||
T Consensus 879 L~~l~~~~~~~~~~~~~~l~~Q~~~~q~~~k~SY~v~d~~~~~~v~elr~~Lr~~gLr~~~iys~~~~~LDVlP~~ASKg 958 (1050)
T TIGR02468 879 LVKWAASINEKKGENEEQIVEEDEESSTDHCYAFKVKDPSKVPPVKELRKLLRIQGLRCHAVYCRNGTRLNVIPLLASRS 958 (1050)
T ss_pred HHHHhhhcccccccccccceecChhhCCCceEEEEecCcccCccHHHHHHHHHhCCCceEEEeecCCcEeeeeeCCCCHH
Confidence 87877754333333333345556677899999999878887888999999999999999999999755999999999999
Q ss_pred HHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEecCccccccccccccCCCCCCCCCcCCCCceEEccCcCC
Q 002660 800 QALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCT 879 (895)
Q Consensus 800 ~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~ 879 (895)
.||+||+.+|||+++++++|+||++||||.+||.....+|++.+.++....+.+++.+|.++||+|.++|++.++.+.+.
T Consensus 959 qAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~G~~~tvi~~g~~~~~s~~l~~~~sY~~eDVvp~dspni~~~~~~~~ 1038 (1050)
T TIGR02468 959 QALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTVILKGVVSRGSEQLHANRSYPLDDVVPLDSPNIVQATGGSS 1038 (1050)
T ss_pred HHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhCCceeEEEEecccccchhhhcccCCCcccccccCCCCCeEeecCCCC
Confidence 99999999999999999999999999997779999999999999886565667799999999999999999999999999
Q ss_pred hHHHHHHHHHhC
Q 002660 880 TSDIRSSLEQLG 891 (895)
Q Consensus 880 ~dGI~~al~~~~ 891 (895)
.+.|..||+++|
T Consensus 1039 ~~di~~aL~~l~ 1050 (1050)
T TIGR02468 1039 SDDISDALKKLS 1050 (1050)
T ss_pred HHHHHHHHHhcC
Confidence 999999999986
No 2
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=100.00 E-value=6.4e-56 Score=516.23 Aligned_cols=460 Identities=28% Similarity=0.473 Sum_probs=350.0
Q ss_pred CcceeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHH--------hcCCCee----EEEEeecCccCCCCCCCCC
Q 002660 1 MIFNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARAL--------GSMPGVY----RVDLLTRQVSAPDVDWSYG 68 (895)
Q Consensus 1 ~~~m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L--------~~~G~~h----~V~v~t~~~~~~~~~~~y~ 68 (895)
|+ |||+|||+||+++.++ .+|+ ||+||+..||.++|++| +++| | +|+|+|+...+.. ...|.
T Consensus 254 ~~-~rIa~lS~Hg~~~~~~-~lG~-~DtGGq~vYV~elaraL~~~~~~~La~~G--~~v~~~V~I~TR~~~~~~-~~~~~ 327 (784)
T TIGR02470 254 MV-FNVVILSPHGYFGQEN-VLGL-PDTGGQVVYILDQVRALENEMLQRIKLQG--LEITPKILIVTRLIPDAE-GTTCN 327 (784)
T ss_pred cc-ceEEEEecccccCCcc-ccCC-CCCCCceeHHHHHHHHHHHHHHHHHHhcC--CCccceEEEEecCCCCcc-ccccc
Confidence 66 6999999999988877 5997 69999999999999985 6888 8 8889999875432 34455
Q ss_pred CcccccCCCCCCcccccCCCCCCeEEEecCCCCC-----CcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCC
Q 002660 69 EPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPK-----DKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPV 143 (895)
Q Consensus 69 ~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~-----~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~ 143 (895)
++.|.. ...++++|+|+|++|. ++|++++.+|+|+..|...+.+++.... +.
T Consensus 328 ~~~e~~------------~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~~-----------~~ 384 (784)
T TIGR02470 328 QRLEKV------------YGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAEL-----------QG 384 (784)
T ss_pred cccccc------------cCCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhc-----------CC
Confidence 554443 3457999999999884 2579999999999999999887765311 25
Q ss_pred CCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCC
Q 002660 144 WPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITST 223 (895)
Q Consensus 144 ~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s 223 (895)
+||+||+|+|+++++|..+++.+|+|+++|.|++...++. ..+. .+......|++..++.+|..+++.||.||++|
T Consensus 385 ~pDlIHahy~d~glva~lla~~lgVP~v~t~HsL~~~K~~---~~g~-~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT 460 (784)
T TIGR02470 385 KPDLIIGNYSDGNLVASLLARKLGVTQCTIAHALEKTKYP---DSDI-YWQEFEDKYHFSCQFTADLIAMNAADFIITST 460 (784)
T ss_pred CCCEEEECCCchHHHHHHHHHhcCCCEEEECCcchhhccc---cccc-ccccchhHHHhhhhhhHHHHHHhcCCEEEECc
Confidence 7999999999999999999999999999999999766532 1121 22234456777788888999999999999999
Q ss_pred hHHHH------HHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 002660 224 RQEIE------EQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPD 297 (895)
Q Consensus 224 ~~~~~------~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~ 297 (895)
.+++. .||+.|..|... .. +++..| .+.+.+|+.+||||+|.+.|.|.....+.. ......-..-.
T Consensus 461 ~qEi~~~~~~v~qY~s~~~ft~p--~L--y~vvnG---id~~~~Ki~VVpPGVD~~iF~P~~~~~~r~-~~~~~~ie~ll 532 (784)
T TIGR02470 461 YQEIAGTKDSVGQYESHQAFTMP--GL--YRVVHG---IDVFDPKFNIVSPGADESIYFPYSDKEKRL-TNLHPEIEELL 532 (784)
T ss_pred HHHhhhhhhhhhhhhhccccccc--ce--eeeecC---ccCCcCCeEEECCCcChhhcCCCCchhhhh-hhhhcchhhhc
Confidence 88765 355544443321 00 011222 223567999999999999998754321100 00000000000
Q ss_pred CchhHHhhhh--cCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCC-ccccccchHHHHHHHHHH
Q 002660 298 PPIWSEIMRF--FTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDG-IDEMSSTSASVLLSVLKL 374 (895)
Q Consensus 298 ~~~~~~~~~~--~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~-~~~~~~~~~~~~~~l~~~ 374 (895)
.........+ ...+++++|+++||+++.||++.+++|+..+..+.+..++ +|+|++.+ .+....+..+...++..+
T Consensus 533 ~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~~~~L-VIVGGg~~~~~s~d~ee~~~i~~L~~l 611 (784)
T TIGR02470 533 FSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRELVNL-VVVAGKLDAKESKDREEQAEIEKMHNL 611 (784)
T ss_pred cchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCCCeEE-EEEeCCcccccccchhHHHHHHHHHHH
Confidence 0001111222 3367889999999999999999999999987655555666 45665532 222222334567889999
Q ss_pred HHhcCCCCcEEeCCCC-CCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEe
Q 002660 375 IDKYDLYGQVAYPKHH-KQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLV 453 (895)
Q Consensus 375 ~~~~~l~~~v~~~g~~-~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv 453 (895)
++++++.++|.|+|.. +..++.++|+.++.++||||+||++|+||++++||||||+|||+|+.||+.|+|.++.+|++|
T Consensus 612 a~~~gL~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfLV 691 (784)
T TIGR02470 612 IDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHI 691 (784)
T ss_pred HHHhCCCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEe
Confidence 9999999999999975 667899999864444479999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHH
Q 002660 454 DPHDQQSVADALLKLV----ADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRI 502 (895)
Q Consensus 454 ~p~d~~~la~ai~~ll----~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~ 502 (895)
+|.|+++++++|.+++ +|++.|+++++++++.+ ++|||+.++++++.+.
T Consensus 692 dp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 692 DPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 9999999999999886 59999999999999999 6999999999999886
No 3
>PLN00142 sucrose synthase
Probab=100.00 E-value=4e-55 Score=509.08 Aligned_cols=459 Identities=27% Similarity=0.444 Sum_probs=343.9
Q ss_pred CcceeEeeeecccccccCcccCCCCCCCCchhHHHHHHH--------HHHhcCCCeeEE----EEeecCccCCCCCCCCC
Q 002660 1 MIFNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELA--------RALGSMPGVYRV----DLLTRQVSAPDVDWSYG 68 (895)
Q Consensus 1 ~~~m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La--------~~L~~~G~~h~V----~v~t~~~~~~~~~~~y~ 68 (895)
|+ |||+|||+||++++.+ ++|+ ||||||..||.++| ++|+++| |+| +|+||...+.. ...|.
T Consensus 278 ~~-~~i~~iS~Hg~~~~~~-~lG~-~DtGGQ~vYVl~~aral~~el~~~l~~~G--~~v~~~v~i~TR~i~~~~-~~~~~ 351 (815)
T PLN00142 278 MV-FNVVIFSPHGYFGQAN-VLGL-PDTGGQVVYILDQVRALENEMLLRIKQQG--LDIKPQILIVTRLIPDAK-GTTCN 351 (815)
T ss_pred Hh-Hhhheecccccccccc-cCCC-CCCCCceehHHHHHHHHHHHHHHHHHhcC--CCccceeEEEEeccCCcc-CCccc
Confidence 66 4999999999999998 5997 99999999998766 6777889 866 59999886554 45666
Q ss_pred CcccccCCCCCCcccccCCCCCCeEEEecCCCCC----CcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCC
Q 002660 69 EPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPK----DKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVW 144 (895)
Q Consensus 69 ~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~----~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~ 144 (895)
++.|.+ ...++++|+|+|++|. .+|++|+.+|+|+..|...+..++.+.. +.+
T Consensus 352 ~~~e~v------------~~~~~~~I~rvP~g~~~~~l~~~i~ke~l~p~L~~f~~~~~~~~~~~~-----------~~~ 408 (815)
T PLN00142 352 QRLEKV------------SGTEHSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAASEILAEL-----------QGK 408 (815)
T ss_pred Ccceec------------cCCCceEEEecCCCCCccccccccCHHHHHHHHHHHHHHHHHHHHHhc-----------CCC
Confidence 666555 3356999999999984 2577999999999999999887764311 256
Q ss_pred CcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCCh
Q 002660 145 PVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTR 224 (895)
Q Consensus 145 pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~ 224 (895)
||+||+|||+++++|..+++++|+|+|+|.|+++..++. ..+ ..+......|++..++.+|+.++..||.||++|.
T Consensus 409 PDlIHaHYwdsg~vA~~La~~lgVP~v~T~HsL~k~K~~---~~~-~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIasT~ 484 (815)
T PLN00142 409 PDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYP---DSD-IYWKKFDDKYHFSCQFTADLIAMNHADFIITSTY 484 (815)
T ss_pred CCEEEECCccHHHHHHHHHHHhCCCEEEEcccchhhhcc---ccC-CcccccchhhhhhhchHHHHHHHHhhhHHHhCcH
Confidence 999999999999999999999999999999999877742 222 2333455677888888899999999999999999
Q ss_pred HHHH------HHHhhhcCCC-hHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 002660 225 QEIE------EQWRLYDGFD-PVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPD 297 (895)
Q Consensus 225 ~~~~------~~~~~~~~~~-~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~ 297 (895)
+++. .||..+..|. +. | +|+-.|+ +.+.+++.+||+|+|...|.|...... ....+.+.-....
T Consensus 485 qEi~g~~~~i~qy~sh~~f~~p~----L-~rvv~GI---d~~~~ki~VVppGvD~~~F~P~~~~~~-rl~~l~n~I~~~l 555 (815)
T PLN00142 485 QEIAGSKDTVGQYESHTAFTLPG----L-YRVVHGI---DVFDPKFNIVSPGADMSIYFPYTEKQK-RLTSLHPSIEELL 555 (815)
T ss_pred HHHhcccchhhhhhcccccccch----h-hhhhccc---cccccCeeEECCCCChhhcCCCChHHh-hHHhhcccchhhc
Confidence 8886 3444443332 22 1 2333444 234559999999999999886442110 0000000000000
Q ss_pred CchhHHhhhhc--CCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCC-CccccccchHHHHHHHHHH
Q 002660 298 PPIWSEIMRFF--TNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRD-GIDEMSSTSASVLLSVLKL 374 (895)
Q Consensus 298 ~~~~~~~~~~~--~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~-~~~~~~~~~~~~~~~l~~~ 374 (895)
.........++ ..+++++|+++||+++.||++.+|+|++.+.++.+..++ +|+|++. .......+..+...++..+
T Consensus 556 ~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~L-VIVGgg~d~~~s~d~ee~~el~~L~~L 634 (815)
T PLN00142 556 YSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNL-VVVGGFIDPSKSKDREEIAEIKKMHSL 634 (815)
T ss_pred CChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEE-EEEECCccccccccHHHHHHHHHHHHH
Confidence 00001111222 356788999999999999999999999988654544555 4667652 1111112223345778899
Q ss_pred HHhcCCCCcEEeCCCCC-CCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEe
Q 002660 375 IDKYDLYGQVAYPKHHK-QSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLV 453 (895)
Q Consensus 375 ~~~~~l~~~v~~~g~~~-~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv 453 (895)
++++++.++|.|.|... ..+..++|+..+...|+||+||++||||++++||||||+|||+|+.||+.|+|.++.+|+++
T Consensus 635 a~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV 714 (815)
T PLN00142 635 IEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHI 714 (815)
T ss_pred HHHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEe
Confidence 99999999999998654 23344444421111299999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHH
Q 002660 454 DPHDQQSVADALLKLV----ADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRI 502 (895)
Q Consensus 454 ~p~d~~~la~ai~~ll----~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~ 502 (895)
+|.|+++++++|.+++ +|++.|+++++++++.+ ++|||+.++++++++.
T Consensus 715 ~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 715 DPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 9999999999987654 69999999999999999 6999999999999876
No 4
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=100.00 E-value=2.1e-53 Score=487.69 Aligned_cols=438 Identities=50% Similarity=0.855 Sum_probs=342.9
Q ss_pred eeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCccc
Q 002660 4 NNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 83 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~ 83 (895)
.||++||+||+++++++.+|++|+.||+++|+.+|+++|+++|.+|+|+|+|+...++...+.|..+.+..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~~~~~~~~~--------- 71 (439)
T TIGR02472 1 LYLLLLSLHGLIRGHDLELGRDADTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDYAQPIERI--------- 71 (439)
T ss_pred CeEEEEeCCcCCCCCccccCCCCCCCCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCccCCCeeEe---------
Confidence 38999999999999999999999999999999999999999993239999998654333333343322222
Q ss_pred ccCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHh
Q 002660 84 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLS 163 (895)
Q Consensus 84 ~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~ 163 (895)
.+|++++|+++++. .+.+....|+++..|...+.+.+++. ..+|||||+|++.++.++..++
T Consensus 72 -----~~gv~v~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~------------~~~~DvIH~h~~~~~~~~~~~~ 133 (439)
T TIGR02472 72 -----APGARIVRLPFGPR-RYLRKELLWPYLDELADNLLQHLRQQ------------GHLPDLIHAHYADAGYVGARLS 133 (439)
T ss_pred -----CCCcEEEEecCCCC-CCcChhhhhhhHHHHHHHHHHHHHHc------------CCCCCEEEEcchhHHHHHHHHH
Confidence 25999999998776 46566667777777776666655431 1369999999988888898899
Q ss_pred ccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHH
Q 002660 164 GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 243 (895)
Q Consensus 164 ~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~ 243 (895)
+..++|+|+|.|+.+......+...+. ....+...+.+..++..|+..++.+|.|+++|..++.+++..+..+.+
T Consensus 134 ~~~~~p~V~t~H~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~---- 208 (439)
T TIGR02472 134 RLLGVPLIFTGHSLGREKRRRLLAAGL-KPQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEEQYALYDSYQP---- 208 (439)
T ss_pred HHhCCCEEEecccccchhhhhcccCCC-ChhhhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHHHHHhccCCCc----
Confidence 999999999999875433221111111 111222233444555568889999999999998766665544433333
Q ss_pred HHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCC
Q 002660 244 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD 323 (895)
Q Consensus 244 ~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~ 323 (895)
+++.+||||||.+.|.+..... ........+++++..++.++|+++||+.
T Consensus 209 -----------------~ki~vIpnGvd~~~f~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~i~~vGrl~ 258 (439)
T TIGR02472 209 -----------------ERMQVIPPGVDLSRFYPPQSSE-------------ETSEIDNLLAPFLKDPEKPPILAISRPD 258 (439)
T ss_pred -----------------cceEEECCCcChhhcCCCCccc-------------cchhHHHHHHhhccccCCcEEEEEcCCc
Confidence 3899999999999997643111 1111223344455567788999999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhh
Q 002660 324 PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAA 403 (895)
Q Consensus 324 ~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~ 403 (895)
+.||++.+|+|++.+......+++.+++|++++.+.+++...++..++..+++++++.++|.|+|+++.++++.+|+.|+
T Consensus 259 ~~Kg~~~li~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~~~~~~~~~~a~ 338 (439)
T TIGR02472 259 RRKNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPELYRLAA 338 (439)
T ss_pred ccCCHHHHHHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCHHHHHHHHHHHh
Confidence 99999999999987643344466666778888776776655667778888999999999999999999999999999874
Q ss_pred cCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 002660 404 KTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGL 483 (895)
Q Consensus 404 ~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~ 483 (895)
.+.|+||+||..|+||++++||||||+|||+|+.||..|++.++.+|++++|.|+++++++|.+++++++.+++++++++
T Consensus 339 ~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~~~a~ 418 (439)
T TIGR02472 339 RSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSDSSQWQLWSRNGI 418 (439)
T ss_pred hcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 44589999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHh-hcCCHHHHHHHHHHHHH
Q 002660 484 KNI-HLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 484 ~~~-~~~s~~~~a~~~~~~~~ 503 (895)
+.+ ++|||+.++++|+++++
T Consensus 419 ~~~~~~fsw~~~~~~~~~l~~ 439 (439)
T TIGR02472 419 EGVRRHYSWDAHVEKYLRILQ 439 (439)
T ss_pred HHHHHhCCHHHHHHHHHHHhC
Confidence 999 69999999999998863
No 5
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=100.00 E-value=2.5e-52 Score=503.04 Aligned_cols=558 Identities=13% Similarity=0.131 Sum_probs=391.0
Q ss_pred CcEEEeccccchhHHHHHhccC-CCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCC
Q 002660 145 PVAIHGHYADAGDSAALLSGAL-NVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITST 223 (895)
Q Consensus 145 pDvVh~h~~~~~~~~~~~~~~~-~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s 223 (895)
-|+|..|.+...+++..+.++. ..++-+.+|-.++... .+. ...+... -...+-.+|.|-..+
T Consensus 134 ~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH~pfP~~~--~f~-----------~lp~~~~---ll~~ll~~Dligf~t 197 (726)
T PRK14501 134 GDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFPSFE--VFR-----------LLPWREE---ILEGLLGADLIGFHT 197 (726)
T ss_pred CCEEEEeCchhhhHHHHHHhhCCCCcEEEEeeCCCCChH--HHh-----------hCCChHH---HHHHHhcCCeEEeCC
Confidence 4899999997777888776653 5788999998776431 110 0111111 123678999999999
Q ss_pred hHHHHHHHhhhcCCChHHHHHHHHh-HhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhH
Q 002660 224 RQEIEEQWRLYDGFDPVLERKLRAR-IKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 302 (895)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~l~~~-~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (895)
...+..++... .+.|+.. ...++.+.|+.. ++.++|+|||++.|.+..... .......
T Consensus 198 ~~~~r~Fl~~~-------~~~l~~~~~~~~~~~~gr~~-~v~v~p~GID~~~f~~~~~~~-------------~~~~~~~ 256 (726)
T PRK14501 198 YDYVRHFLSSV-------LRVLGYETELGEIRLGGRIV-RVDAFPMGIDYDKFHNSAQDP-------------EVQEEIR 256 (726)
T ss_pred HHHHHHHHHHH-------HHHcCCccCCCeEEECCEEE-EEEEEECeEcHHHHHHHhcCc-------------hHHHHHH
Confidence 88777665532 1222211 223466666655 799999999999998643111 0011111
Q ss_pred HhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEE-EEec----C-CCccccccchHHHHHHHHHH
Q 002660 303 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGN----R-DGIDEMSSTSASVLLSVLKL 374 (895)
Q Consensus 303 ~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~--~l~l-ivG~----~-~~~~~~~~~~~~~~~~l~~~ 374 (895)
.++.. .+++++|+++||+++.||+..+|+||+.+.+..+.+ ++++ ++|. + +++++++++..+..++|+..
T Consensus 257 ~lr~~--~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~ 334 (726)
T PRK14501 257 RLRQD--LRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGE 334 (726)
T ss_pred HHHHH--cCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhh
Confidence 12222 256789999999999999999999999987545543 3443 4442 2 44556666667777777777
Q ss_pred HHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHc-----CCCEEEcCCCCchhccccCCC
Q 002660 375 IDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH-----GLPIVATKNGGPVDIHRVLDN 449 (895)
Q Consensus 375 ~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~-----G~PVvas~~gg~~eiv~~~~~ 449 (895)
.+..++.+.++|.+.++.++++++|+.| ||||+||.+||||++++||||| |+||+++..|++.++. .
T Consensus 335 ~~~~~~~pv~~~~~~~~~~~l~~ly~~a----Dv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~----~ 406 (726)
T PRK14501 335 FGTVDWTPIHYFYRSLPFEELVALYRAA----DVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAELA----E 406 (726)
T ss_pred cCCCCcceEEEEeCCCCHHHHHHHHHhc----cEEEecccccccCcccceEEEEcCCCCceEEEecccchhHHhC----c
Confidence 7777788888999999999999999999 9999999999999999999999 6688889999999884 5
Q ss_pred eEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccCCCCCCCCCCCCCCCCCCCCCC
Q 002660 450 GLLVDPHDQQSVADALLKLVADK-QLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPG 528 (895)
Q Consensus 450 g~lv~p~d~~~la~ai~~ll~~~-~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (895)
|++|+|+|++++|++|.++++++ +++....+++++.+.+|||..|+++|++.|+++...+.....
T Consensus 407 ~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~~~~~~~~~~~-------------- 472 (726)
T PRK14501 407 ALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELREAAEKNKAFAS-------------- 472 (726)
T ss_pred CeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhhcccc--------------
Confidence 99999999999999999999965 556666677888888999999999999999987654321111
Q ss_pred CccccccccccccccccCCCCCCCCCCCCCCcccCcchhhhhHHHHHHHHhhccccccccCCCCCccccccCcCCCCccc
Q 002660 529 DSLRDIQDISLNLKFSLDGEKSGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPAL 608 (895)
Q Consensus 529 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (895)
.. ++....+.++.+|+
T Consensus 473 ------~~------------------------------~~~~~~~~~~~~y~---------------------------- 488 (726)
T PRK14501 473 ------KP------------------------------ITPAAAEEIIARYR---------------------------- 488 (726)
T ss_pred ------cc------------------------------CCccCHHHHHHHHH----------------------------
Confidence 00 11234667889998
Q ss_pred cccCeEEEEEecCCCCc--------chhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEc
Q 002660 609 RRRKHIFVISVDCDSTT--------GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 680 (895)
Q Consensus 609 ~~~~kli~~DiDGTL~~--------~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 680 (895)
.+.+|+|++|+||||+. .+++.+.++|++|+++ +|+.|+|+|||++..+.+++..+++ ++|++
T Consensus 489 ~~~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d---~g~~V~ivSGR~~~~l~~~~~~~~l------~liae 559 (726)
T PRK14501 489 AASRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAAD---PNTDVAIISGRDRDTLERWFGDLPI------HLVAE 559 (726)
T ss_pred hccceEEEEecCccccCCCCCcccCCCCHHHHHHHHHHHcC---CCCeEEEEeCCCHHHHHHHhCCCCe------EEEEe
Confidence 67789999999999942 3678999999999996 4799999999999999999987665 69999
Q ss_pred CCceEeeccCCCCCCCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEEEeeCCCC
Q 002660 681 SGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGM 760 (895)
Q Consensus 681 nGa~I~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~ 760 (895)
||++++..++.+.. .. .....|. +.+..+++.+....... +.+ ....++++++.+.+.
T Consensus 560 nG~~i~~~~~~w~~--~~-------~~~~~w~-~~v~~il~~~~~~~~gs--------~ie----~k~~~l~~~~r~~d~ 617 (726)
T PRK14501 560 HGAWSRAPGGEWQL--LE-------PVATEWK-DAVRPILEEFVDRTPGS--------FIE----EKEASLAWHYRNADP 617 (726)
T ss_pred CCEEEeCCCCceEE--CC-------CcchhHH-HHHHHHHHHHHhcCCCc--------EEE----EcceEEEEEccCCCH
Confidence 99999865421100 00 0122332 44555554443322111 111 113456666543321
Q ss_pred C---ccHHHHHHHHHhc--cCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCc
Q 002660 761 T---PPVKELRKVLRIQ--ALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGV 835 (895)
Q Consensus 761 ~---~~~~~l~~~l~~~--~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~a 835 (895)
. ...+++.+.+... ...+.++ +++ +++||+|+++|||.|+++|++ +++++.+++ +||+.| | ++||+.+
T Consensus 618 ~~~~~~a~~l~~~l~~~~~~~~~~v~-~g~-~~veV~p~~vnKG~al~~ll~--~~~~d~vl~-~GD~~n-D-e~Mf~~~ 690 (726)
T PRK14501 618 ELGEARANELILALSSLLSNAPLEVL-RGN-KVVEVRPAGVNKGRAVRRLLE--AGPYDFVLA-IGDDTT-D-EDMFRAL 690 (726)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEE-ECC-eEEEEEECCCCHHHHHHHHHh--cCCCCEEEE-ECCCCC-h-HHHHHhc
Confidence 1 0123445555432 2233333 334 599999999999999999999 777788888 666666 7 9999996
Q ss_pred ---ceEEEecCccccccccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHHHh
Q 002660 836 ---HKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQL 890 (895)
Q Consensus 836 ---g~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~ 890 (895)
+.+|+|||+. +.|.|...++ +++...|+.+
T Consensus 691 ~~~~~~v~vG~~~-----------------------s~A~~~l~~~--~eV~~~L~~l 723 (726)
T PRK14501 691 PETAITVKVGPGE-----------------------SRARYRLPSQ--REVRELLRRL 723 (726)
T ss_pred ccCceEEEECCCC-----------------------CcceEeCCCH--HHHHHHHHHH
Confidence 7999999865 2344555655 5588888765
No 6
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=100.00 E-value=1.5e-49 Score=474.71 Aligned_cols=543 Identities=14% Similarity=0.129 Sum_probs=393.2
Q ss_pred cEEEeccccchhHHHHHhcc-CCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCCh
Q 002660 146 VAIHGHYADAGDSAALLSGA-LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTR 224 (895)
Q Consensus 146 DvVh~h~~~~~~~~~~~~~~-~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~ 224 (895)
|+|..|.+...+++..+.++ ...++-|.+|..++..- ++. ...+.. .-...+-.||.|-..|.
T Consensus 203 d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~e--ifr-----------~LP~r~---eiL~glL~aDlIGFht~ 266 (854)
T PLN02205 203 DFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE--IYK-----------TLPIRE---ELLRALLNSDLIGFHTF 266 (854)
T ss_pred CEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCChH--HHh-----------hCCcHH---HHHHHHhcCCeEEecCH
Confidence 79999998777777777765 45789999998766431 110 000111 12346789999999999
Q ss_pred HHHHHHHhhhcCCChHHHHHHHHhHh-----ccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 002660 225 QEIEEQWRLYDGFDPVLERKLRARIK-----RNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPP 299 (895)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~l~~~~~-----~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 299 (895)
..+..+... ..+.|+.+.. .|+.+.|+.+ ++.++|.|||++.|....... ....
T Consensus 267 ~yar~Fl~~-------~~r~lgl~~~~~~g~~~~~~~Gr~v-~v~~~PigId~~~~~~~~~~~-------------~~~~ 325 (854)
T PLN02205 267 DYARHFLSC-------CSRMLGLSYESKRGYIGLEYYGRTV-SIKILPVGIHMGQLQSVLSLP-------------ETEA 325 (854)
T ss_pred HHHHHHHHH-------HHHHhCCcccCCCcceeEEECCcEE-EEEEEeCeEcHHHHHHHhcCh-------------hHHH
Confidence 888776552 2334443322 3677788887 899999999999886432111 1122
Q ss_pred hhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEEE--E----ecCCCccccccchHHHHHHH
Q 002660 300 IWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELA--NLTLI--M----GNRDGIDEMSSTSASVLLSV 371 (895)
Q Consensus 300 ~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~--~l~li--v----G~~~~~~~~~~~~~~~~~~l 371 (895)
...+++..+..+++++|+.++|+|+.|||...+.||++|++.+|.+ ++++| + +.+++|++++.+..+.+++|
T Consensus 326 ~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~rI 405 (854)
T PLN02205 326 KVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRI 405 (854)
T ss_pred HHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHHHHHHH
Confidence 2333443332346899999999999999999999999998777766 44442 2 45678889999999999999
Q ss_pred HHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHc--------------------CCC
Q 002660 372 LKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH--------------------GLP 431 (895)
Q Consensus 372 ~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~--------------------G~P 431 (895)
|+.+++.+|.+.+++...++.+++.++|+.| ||+++||++|||||+++||++| |+.
T Consensus 406 N~~fg~~~~~Pv~~~~~~~~~~e~~aly~~A----Dv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvL 481 (854)
T PLN02205 406 NETFGKPGYDPIVLIDAPLKFYERVAYYVVA----ECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSML 481 (854)
T ss_pred HhhcCCCCCceEEEEecCCCHHHHHHHHHhc----cEEEeccccccccccchheeEEccCccccccccccccccCCCCce
Confidence 9999999999999999999999999999999 9999999999999999999987 678
Q ss_pred EEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccCCCC
Q 002660 432 IVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADK-QLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPRHP 510 (895)
Q Consensus 432 Vvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~-~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~~~~~~ 510 (895)
|||..+|+..++ ..+++|||+|++++|+||.++|+++ ++++...+..++++..++...|++.|+..+++....+.
T Consensus 482 iLSEfaGaa~~L----~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~~~~~~ 557 (854)
T PLN02205 482 VVSEFIGCSPSL----SGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHS 557 (854)
T ss_pred EeeeccchhHHh----CcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHh
Confidence 889999999888 4689999999999999999999965 45566666667777999999999999999988743221
Q ss_pred CCCCCCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCcccCcchhhhhHHHHHHHHhhccccccccCC
Q 002660 511 QWQRNDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEKSGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKS 590 (895)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (895)
.... -.+.++++|++ +++++++++...++++.+|+
T Consensus 558 ~~~~--------------------~~~g~g~~~~~---------------~~~~~~~~~l~~~~i~~~y~---------- 592 (854)
T PLN02205 558 RRRC--------------------WGIGFGLSFRV---------------VALDPNFRKLSMEHIVSAYK---------- 592 (854)
T ss_pred hhhh--------------------ccccccccccc---------------ccccccccccCHHHHHHHHH----------
Confidence 1111 01123344444 56777888889999999999
Q ss_pred CCCccccccCcCCCCccccccCeEEEEEecCCCC------cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHH
Q 002660 591 GSTDKVDQNTGAAKFPALRRRKHIFVISVDCDST------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFL 664 (895)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~~~~kli~~DiDGTL~------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l 664 (895)
++.+|+|++|+||||. ..+++.+.++|++|.+. +|+.|+|+|||++.++.+++
T Consensus 593 ------------------~~~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d---~g~~VaIvSGR~~~~L~~~f 651 (854)
T PLN02205 593 ------------------RTTTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRD---KNNMVFIVSARSRKTLADWF 651 (854)
T ss_pred ------------------hhcCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhc---CCCEEEEEeCCCHHHHHHHh
Confidence 6788999999999993 25678899999998776 58999999999999999999
Q ss_pred HhCC-CCCCCCCEEEEcCCceEeeccCCCCCCCcccchhhH---HHhhcccCcchHHHHHHhh----hhhccccccccCC
Q 002660 665 VSGH-LSPSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYH---SHIEYRWGGEGLRKTLVRW----ASQVTDKKAESGE 736 (895)
Q Consensus 665 ~~l~-l~~~~~d~~I~~nGa~I~~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 736 (895)
.... + ++||+||+++...+.. .|. ......|. +.+..+++.+ ++...+.+
T Consensus 652 ~~~~~l------~laaEHG~~ir~~~~~----------~w~~~~~~~~~~w~-~~v~~i~~~y~ertpGs~IE~K----- 709 (854)
T PLN02205 652 SPCEKL------GIAAEHGYFLRLKRDV----------EWETCVPVADCSWK-QIAEPVMQLYTETTDGSTIEDK----- 709 (854)
T ss_pred CCCCCe------EEEEeCCEEEEeCCCc----------eeeecchhhhHHHH-HHHHHHHHHHhcCCCchhheec-----
Confidence 7753 4 6999999999865421 111 00112232 2223333323 23222222
Q ss_pred cccccccccCCceEEEEEeeCCCC-Cc--cHHHHHHHHHhccCeE-EEEEecCCeeEEeecCCCChHHHHHHHHH---Hh
Q 002660 737 KVLTPAEQLSTNYCYAFSVQKPGM-TP--PVKELRKVLRIQALRC-HVIYCQNGSRINVIPVLASRSQALRYLYL---RW 809 (895)
Q Consensus 737 ~~~~~~~~~~~~~k~~~~~~~~~~-~~--~~~~l~~~l~~~~~~~-~~~~s~~~~~lEI~p~g~sKg~al~~L~~---~~ 809 (895)
...+.+++++.+. .. ..+++...+.....+. ..+.+.. +++||.|+|+|||.|++.|++ ++
T Consensus 710 -----------~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~-~vvEV~p~gvnKG~Al~~Ll~~~~~~ 777 (854)
T PLN02205 710 -----------ETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQ-NIVEVKPQGVSKGLVAKRLLSIMQER 777 (854)
T ss_pred -----------ceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECC-cEEEEEeCCCCHHHHHHHHHHHHHhc
Confidence 4566677654321 10 1234444444321111 1234444 499999999999999999985 46
Q ss_pred CCCcccEEEEecCCCCCCccccccCcc
Q 002660 810 GVELSKMVVFVGESGDTDYEGLLGGVH 836 (895)
Q Consensus 810 gi~~~~viaf~Gd~nn~D~~eMl~~ag 836 (895)
|++++.+++ +||+.| | ++||+.++
T Consensus 778 g~~~d~vl~-~GDD~n-D-edMF~~~~ 801 (854)
T PLN02205 778 GMLPDFVLC-IGDDRS-D-EDMFEVIT 801 (854)
T ss_pred CCCcccEEE-EcCCcc-H-HHHHHHhh
Confidence 999999988 555656 6 99999886
No 7
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=1.5e-48 Score=467.63 Aligned_cols=535 Identities=12% Similarity=0.088 Sum_probs=376.8
Q ss_pred CcEEEeccccchhHHHHHhcc-CCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCC
Q 002660 145 PVAIHGHYADAGDSAALLSGA-LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITST 223 (895)
Q Consensus 145 pDvVh~h~~~~~~~~~~~~~~-~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s 223 (895)
-|+|..|.+...+++..+.++ ...++.+.+|..++..- ++. .++ +.+ .-...+-.||.|-..|
T Consensus 148 ~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPFPs~e--~fr--~lp---------~r~---~il~gll~aDligF~t 211 (797)
T PLN03063 148 GDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPSSE--IYK--TLP---------SRS---ELLRAVLTADLIGFHT 211 (797)
T ss_pred CCEEEEecchhhhHHHHHHHhCCCCcEEEEecCCCCCHH--HHh--hCC---------CHH---HHHHHHhcCCEEEeCC
Confidence 479999998777788777765 46899999998766431 110 001 111 1224678999999999
Q ss_pred hHHHHHHHhhhcCCChHHHHHHHHh-HhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhH
Q 002660 224 RQEIEEQWRLYDGFDPVLERKLRAR-IKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 302 (895)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~l~~~-~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (895)
...+..+.... .+.|+.. ...++.+.|+.. ++.+||+|||++.|.+..... .......
T Consensus 212 ~~y~r~Fl~~~-------~r~l~~~~~~~~i~~~gr~~-~I~viP~GID~~~f~~~~~~~-------------~~~~~~~ 270 (797)
T PLN03063 212 YDFARHFLSAC-------TRILGVEGTHEGVVDQGKVT-RVAVFPIGIDPERFINTCELP-------------EVKQHMK 270 (797)
T ss_pred HHHHHHHHHHH-------HHHhCccccCCceEECCeEE-EEEEEecccCHHHHHHHhcCh-------------hHHHHHH
Confidence 98887765532 2233322 234566666666 899999999999887532110 0011111
Q ss_pred HhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEEE-E-----ecCCCccccccchHHHHHHHHHH
Q 002660 303 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELA--NLTLI-M-----GNRDGIDEMSSTSASVLLSVLKL 374 (895)
Q Consensus 303 ~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~--~l~li-v-----G~~~~~~~~~~~~~~~~~~l~~~ 374 (895)
.+++. ..++++|+++||+++.||+..+|+||+.+.+.++.+ +++|+ + |+++.++.+++...++.++++..
T Consensus 271 ~lr~~--~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~ 348 (797)
T PLN03063 271 ELKRF--FAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGR 348 (797)
T ss_pred HHHHh--cCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcc
Confidence 22222 246789999999999999999999999987656655 35443 2 24455666666666666677777
Q ss_pred HHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCC----EEEcCCCCchhccccCCCe
Q 002660 375 IDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLP----IVATKNGGPVDIHRVLDNG 450 (895)
Q Consensus 375 ~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~P----Vvas~~gg~~eiv~~~~~g 450 (895)
++..++.+.+++.+.++.+++.++|+.| ||||+||++||||++++||||||+| +|+|..+|..+.+ +.+|
T Consensus 349 ~g~~~~~pv~~l~~~v~~~el~aly~~A----DvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l--~~~a 422 (797)
T PLN03063 349 FGSVSSVPIHHLDCSVDFNYLCALYAIT----DVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSL--GAGA 422 (797)
T ss_pred cccCCCceeEEecCCCCHHHHHHHHHhC----CEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCchhhh--cCCe
Confidence 7777888888899999999999999999 9999999999999999999999998 8888888877765 4579
Q ss_pred EEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccCCCCCCCCCCCCCCCCCCCCCCC
Q 002660 451 LLVDPHDQQSVADALLKLVA-DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPGD 529 (895)
Q Consensus 451 ~lv~p~d~~~la~ai~~ll~-~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (895)
++|||+|++++|++|.++|+ ++++++++.+..++++.+++|..|++.|++.++++...+.....
T Consensus 423 llVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~~~~~~~~--------------- 487 (797)
T PLN03063 423 LLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIVEAELRTR--------------- 487 (797)
T ss_pred EEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhhhhhhccc---------------
Confidence 99999999999999999999 66778888888999999999999999999999887654321111
Q ss_pred ccccccccccccccccCCCCCCCCCCCCCCcccCcchhhhhHHHHHHHHhhccccccccCCCCCccccccCcCCCCcccc
Q 002660 530 SLRDIQDISLNLKFSLDGEKSGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALR 609 (895)
Q Consensus 530 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (895)
+. .+......++.+|+ .
T Consensus 488 -----~~------------------------------~~~l~~~~~~~~y~----------------------------~ 504 (797)
T PLN03063 488 -----NI------------------------------PLELPEQDVIQQYS----------------------------K 504 (797)
T ss_pred -----CC------------------------------CCCCCHHHHHHHHH----------------------------h
Confidence 00 01234567889998 6
Q ss_pred ccCeEEEEEecCCCC-----------cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEE
Q 002660 610 RRKHIFVISVDCDST-----------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFI 678 (895)
Q Consensus 610 ~~~kli~~DiDGTL~-----------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I 678 (895)
+.+++||+|+||||. ..+++.+.++|++|.+. ++..|+|+|||+...+..++...++ +++
T Consensus 505 a~~rll~LDyDGTL~~~~~~~~~p~~a~p~~~l~~~L~~L~~d---~~~~V~IvSGR~~~~L~~~~~~~~l------~l~ 575 (797)
T PLN03063 505 SNNRLLILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSD---PKTTVVVLSRSGKDILDKNFGEYNI------WLA 575 (797)
T ss_pred ccCeEEEEecCccccCCCCCccccccCCCCHHHHHHHHHHHcC---CCCEEEEEeCCCHHHHHHHhCCCCC------cEE
Confidence 778999999999993 12667899999999997 5889999999999999999987666 599
Q ss_pred EcCCceEeeccCCCCC-CCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEEEeeC
Q 002660 679 CNSGSDLYYSTLNSED-GPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQK 757 (895)
Q Consensus 679 ~~nGa~I~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 757 (895)
++||+++...++.+.. .....+..|...+. ..++...++.+++..+.+ .+.+.|+++.
T Consensus 576 aeHG~~~r~~~~~w~~~~~~~~~~~w~~~v~-----~~l~~~~~rtpGs~iE~K----------------~~sla~HyR~ 634 (797)
T PLN03063 576 AENGMFLRHTSGEWVTTMPEHMNLDWVDGVK-----NVFKYFTDRTPRSYVEKS----------------ETSLVWNYEY 634 (797)
T ss_pred EeCCEEEecCCCceeeccccccChhHHHHHH-----HHHHHHHHhCCCcEEEEc----------------CeEEEEEcCC
Confidence 9999998754321110 00001122322211 122333444555555554 5667788764
Q ss_pred CCCC---ccHHHHHHHHHhc---cCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHh------CCCcccEEEEecCC-C
Q 002660 758 PGMT---PPVKELRKVLRIQ---ALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRW------GVELSKMVVFVGES-G 824 (895)
Q Consensus 758 ~~~~---~~~~~l~~~l~~~---~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~------gi~~~~viaf~Gd~-n 824 (895)
.+.. ....++...+... ...+.+ ..+.+.+||.|.|+|||.|++.|++++ +-+. +++.++||+ .
T Consensus 635 adp~~g~~~a~el~~~l~~~~~~~~~~~v--~~Gk~vvEvrp~gvnKG~Av~~ll~~~~~~~~~~~~~-dfvl~~Gdd~~ 711 (797)
T PLN03063 635 ADVEFGRAQARDMLQHLWAGPISNASVDV--VRGQKSVEVHAIGVTKGAAIGRILGEIVHNKSMTTPI-DFVFCSGYFLE 711 (797)
T ss_pred CChHHHHHHHHHHHHHHHHhhccCCCcEE--EECCeEEEEEcCCCChHHHHHHHHHHhhhccccCCCC-CEEEEeCCCCC
Confidence 4211 2234455554221 123433 344469999999999999999999987 2233 345446665 6
Q ss_pred CCCccccccCcce
Q 002660 825 DTDYEGLLGGVHK 837 (895)
Q Consensus 825 n~D~~eMl~~ag~ 837 (895)
+ | ++||++.+-
T Consensus 712 ~-D-EdmF~~l~~ 722 (797)
T PLN03063 712 K-D-EDVYTFFEP 722 (797)
T ss_pred C-c-HHHHHhccc
Confidence 6 8 999998763
No 8
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=6.6e-47 Score=448.05 Aligned_cols=535 Identities=13% Similarity=0.108 Sum_probs=382.9
Q ss_pred CcEEEeccccchhHHHHHhccC-CCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCC
Q 002660 145 PVAIHGHYADAGDSAALLSGAL-NVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITST 223 (895)
Q Consensus 145 pDvVh~h~~~~~~~~~~~~~~~-~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s 223 (895)
=|+|.+|.+...+++..+.++. ..++-|.+|..++..- ++. .++ +.. .-...+-.||.|-.-|
T Consensus 232 gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiPFPs~E--ifr--~LP---------~r~---elL~glL~aDlIGFqT 295 (934)
T PLN03064 232 GDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSSE--IHR--TLP---------SRS---ELLRSVLAADLVGFHT 295 (934)
T ss_pred CCEEEEecchhhHHHHHHHHhCCCCcEEEEecCCCCChH--HHh--hCC---------cHH---HHHHHHhcCCeEEeCC
Confidence 3799999987778888887654 5788999998766431 110 001 111 1224678999999999
Q ss_pred hHHHHHHHhhhcCCChHHHHHHHHh-HhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhH
Q 002660 224 RQEIEEQWRLYDGFDPVLERKLRAR-IKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 302 (895)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~l~~~-~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (895)
...+..+.... .+.|+.+ ...+|.+.|+.+ ++.++|.|||++.|....... .......
T Consensus 296 ~~y~rhFl~~c-------~rlLg~~~~~~~v~~~Gr~v-~V~~~PiGID~~~f~~~~~~~-------------~v~~~~~ 354 (934)
T PLN03064 296 YDYARHFVSAC-------TRILGLEGTPEGVEDQGRLT-RVAAFPIGIDSDRFIRALETP-------------QVQQHIK 354 (934)
T ss_pred HHHHHHHHHHH-------HHHhCccccCCeEEECCEEE-EEEEEeCEEcHHHHHHHhcCh-------------hHHHHHH
Confidence 98887765532 2333333 234577777776 799999999999997532111 1112222
Q ss_pred HhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc--EEEE--E----ecCCCccccccchHHHHHHHHHH
Q 002660 303 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELAN--LTLI--M----GNRDGIDEMSSTSASVLLSVLKL 374 (895)
Q Consensus 303 ~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~--l~li--v----G~~~~~~~~~~~~~~~~~~l~~~ 374 (895)
.++... .++++|++++|+++.|||...|+||+++++.+|.+. ++++ + +++++|+.++++..+.+++||..
T Consensus 355 ~lr~~~--~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~ 432 (934)
T PLN03064 355 ELKERF--AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGR 432 (934)
T ss_pred HHHHHh--CCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhh
Confidence 333322 367899999999999999999999999877677653 4433 1 55677888999999999999999
Q ss_pred HHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHc-----CCCEEEcCCCCchhccccCCC
Q 002660 375 IDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH-----GLPIVATKNGGPVDIHRVLDN 449 (895)
Q Consensus 375 ~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~-----G~PVvas~~gg~~eiv~~~~~ 449 (895)
++..+|.+.+++...++.+++.++|+.| ||+|+||++|||||+++||||| |++||+...|+..++ +..
T Consensus 433 fg~~~w~Pv~~~~~~l~~eeL~AlY~~A----DV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaGaa~~L---~~~ 505 (934)
T PLN03064 433 FGTLTAVPIHHLDRSLDFHALCALYAVT----DVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAAQSL---GAG 505 (934)
T ss_pred ccCCCcceEEEeccCCCHHHHHHHHHhC----CEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCchHHHh---CCc
Confidence 9999999999999999999999999999 9999999999999999999999 788887667766665 346
Q ss_pred eEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccCCCCCCCCCCCCCCCCCCCCCC
Q 002660 450 GLLVDPHDQQSVADALLKLVA-DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPG 528 (895)
Q Consensus 450 g~lv~p~d~~~la~ai~~ll~-~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (895)
|++|||+|++++|++|.++|+ ++++++++.+..++.+..+|+..|++.|++.+......+.....
T Consensus 506 AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L~~~~~~~~~~~~-------------- 571 (934)
T PLN03064 506 AILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVSELNDTVVEAQLRTR-------------- 571 (934)
T ss_pred eEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHhhhhcccc--------------
Confidence 899999999999999999999 67788888899999999999999999999999877543211111
Q ss_pred CccccccccccccccccCCCCCCCCCCCCCCcccCcchhhhhHHHHHHHHhhccccccccCCCCCccccccCcCCCCccc
Q 002660 529 DSLRDIQDISLNLKFSLDGEKSGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPAL 608 (895)
Q Consensus 529 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (895)
+ . .+......++.+|+
T Consensus 572 ------~-~-----------------------------~~~l~~~~~~~~y~---------------------------- 587 (934)
T PLN03064 572 ------Q-V-----------------------------PPQLPPEDAIQRYL---------------------------- 587 (934)
T ss_pred ------c-c-----------------------------CCCCCHHHHHHHHH----------------------------
Confidence 0 0 01334567888998
Q ss_pred cccCeEEEEEecCCCC-----c------------chhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCC
Q 002660 609 RRRKHIFVISVDCDST-----T------------GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSP 671 (895)
Q Consensus 609 ~~~~kli~~DiDGTL~-----~------------~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~ 671 (895)
.+.+++||+|+||||. . .+++.+.++|++|.+. ++..|+|+|||+...+..++..+++
T Consensus 588 ~a~~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~d---p~n~VaIVSGR~~~~Le~~fg~~~L-- 662 (934)
T PLN03064 588 QSNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSD---PKTTIVVLSGSDRSVLDENFGEFDM-- 662 (934)
T ss_pred hccceEEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhC---CCCeEEEEeCCCHHHHHHHhCCCCc--
Confidence 6778999999999993 1 1457889999999997 6889999999999999999988776
Q ss_pred CCCCEEEEcCCceEeeccCCCC-CCCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceE
Q 002660 672 SDFDAFICNSGSDLYYSTLNSE-DGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYC 750 (895)
Q Consensus 672 ~~~d~~I~~nGa~I~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 750 (895)
+++++||+++...+..+. ......+..|...+. ..++...++.+++..+.+ .+.
T Consensus 663 ----~LaAEHG~~~R~~~~~w~~~~~~~~~~~W~~~v~-----~ile~~~eRtPGS~IE~K----------------~~S 717 (934)
T PLN03064 663 ----WLAAENGMFLRHTKGEWMTTMPEHLNMDWVDSVK-----HVFEYFTERTPRSHFETR----------------ETS 717 (934)
T ss_pred ----eEEeeCCeEEecCCCcceeccccccchHHHHHHH-----HHHHHHHhcCCCcEEEEc----------------CcE
Confidence 599999999875432211 000011123322221 122333444555555554 566
Q ss_pred EEEEeeCCC--CC-ccHHHHHHHHHh-c--cCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhC----C-CcccEEEE
Q 002660 751 YAFSVQKPG--MT-PPVKELRKVLRI-Q--ALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWG----V-ELSKMVVF 819 (895)
Q Consensus 751 ~~~~~~~~~--~~-~~~~~l~~~l~~-~--~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~g----i-~~~~viaf 819 (895)
+.|+++..+ .. ....++.+++.. . ...+.+ ..+.+++||.|.|+|||.|++.|++++. . ..-++|.+
T Consensus 718 LawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V--~~Gk~VVEVrP~gvnKG~Av~~ll~~~~~~~~~~~~~DFvlc 795 (934)
T PLN03064 718 LVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDV--VQGSRSVEVRPVGVTKGAAIDRILGEIVHSKSMTTPIDYVLC 795 (934)
T ss_pred EEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEE--EeCCeEEEEEcCCCCHHHHHHHHHHhhhhccccCCCCCEEEE
Confidence 777776442 11 113455555522 1 123443 3444599999999999999999999762 1 12245555
Q ss_pred ecCCCCCCccccccCcc
Q 002660 820 VGESGDTDYEGLLGGVH 836 (895)
Q Consensus 820 ~Gd~nn~D~~eMl~~ag 836 (895)
+||+..|| ++||++..
T Consensus 796 ~GDd~~~D-EdmF~~l~ 811 (934)
T PLN03064 796 IGHFLGKD-EDIYTFFE 811 (934)
T ss_pred eCCCCCCc-HHHHHHHh
Confidence 77754337 99999864
No 9
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=100.00 E-value=1.3e-40 Score=379.76 Aligned_cols=402 Identities=26% Similarity=0.353 Sum_probs=293.1
Q ss_pred EeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCccccc
Q 002660 6 YFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDD 85 (895)
Q Consensus 6 I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~ 85 (895)
|++++.|.. +...+-..+.||+++++.+|+++|+++| |+|+|+|+....+.. +..
T Consensus 1 ~~~~~~~~~----~~~~~~~~~~GG~e~~v~~la~~L~~~G--~~V~v~~~~~~~~~~------~~~------------- 55 (405)
T TIGR03449 1 VAMISMHTS----PLQQPGTGDAGGMNVYILETATELARRG--IEVDIFTRATRPSQP------PVV------------- 55 (405)
T ss_pred CeEEeccCC----ccccCCCcCCCCceehHHHHHHHHhhCC--CEEEEEecccCCCCC------Ccc-------------
Confidence 678888885 3222222346999999999999999999 999999975321110 000
Q ss_pred CCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhcc
Q 002660 86 MGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGA 165 (895)
Q Consensus 86 ~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~~ 165 (895)
...+|+++++++..+. .......+...+..|...+++.+. .. ...+||+||+|.+..+++++.+++.
T Consensus 56 -~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~-----~~~~~Diih~h~~~~~~~~~~~~~~ 122 (405)
T TIGR03449 56 -EVAPGVRVRNVVAGPY-EGLDKEDLPTQLCAFTGGVLRAEA------RH-----EPGYYDLIHSHYWLSGQVGWLLRDR 122 (405)
T ss_pred -ccCCCcEEEEecCCCc-ccCCHHHHHHHHHHHHHHHHHHHh------hc-----cCCCCCeEEechHHHHHHHHHHHHh
Confidence 1125899999876554 211111111111112211111111 10 1247999999998778888888888
Q ss_pred CCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHH
Q 002660 166 LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKL 245 (895)
Q Consensus 166 ~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l 245 (895)
.++|+|+|.|+.+......+. .... .........|+..++.+|.|+++|+...+.+...+..
T Consensus 123 ~~~p~v~t~h~~~~~~~~~~~-~~~~--------~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~~~~~--------- 184 (405)
T TIGR03449 123 WGVPLVHTAHTLAAVKNAALA-DGDT--------PEPEARRIGEQQLVDNADRLIANTDEEARDLVRHYDA--------- 184 (405)
T ss_pred cCCCEEEeccchHHHHHHhcc-CCCC--------CchHHHHHHHHHHHHhcCeEEECCHHHHHHHHHHcCC---------
Confidence 899999999987532211000 0000 0001111235667899999999999877766554421
Q ss_pred HHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCCC
Q 002660 246 RARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPK 325 (895)
Q Consensus 246 ~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~~ 325 (895)
+..++.+||||+|.+.|.+.. ......+++.++++++|+++||+.+.
T Consensus 185 -------------~~~ki~vi~ngvd~~~~~~~~--------------------~~~~~~~~~~~~~~~~i~~~G~l~~~ 231 (405)
T TIGR03449 185 -------------DPDRIDVVAPGADLERFRPGD--------------------RATERARLGLPLDTKVVAFVGRIQPL 231 (405)
T ss_pred -------------ChhhEEEECCCcCHHHcCCCc--------------------HHHHHHhcCCCCCCcEEEEecCCCcc
Confidence 223899999999998886432 01123345555678999999999999
Q ss_pred CCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhc
Q 002660 326 KNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAK 404 (895)
Q Consensus 326 Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~ 404 (895)
||++.+++|++.+.+..+..++.+ ++|+..... .....++..+++.+++.++|.|+|+++.+++..+|+.|
T Consensus 232 K~~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~g------~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~a-- 303 (405)
T TIGR03449 232 KAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSG------LATPDALIELAAELGIADRVRFLPPRPPEELVHVYRAA-- 303 (405)
T ss_pred cCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCc------chHHHHHHHHHHHcCCCceEEECCCCCHHHHHHHHHhC--
Confidence 999999999999864444434654 677532111 01245677888899999999999999999999999999
Q ss_pred CCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Q 002660 405 TKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLK 484 (895)
Q Consensus 405 ~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~ 484 (895)
|++|+||..|+||++++|||+||+|||+++.||..|++.++.+|++++++|+++++++|.+++++++.+++++.++++
T Consensus 304 --d~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~ 381 (405)
T TIGR03449 304 --DVVAVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLLDDPRTRIRMGAAAVE 381 (405)
T ss_pred --CEEEECCCCCCcChHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCHHHHHHHHHHHHHccc
Q 002660 485 NIHLFSWPEHCKTYLSRIAGCK 506 (895)
Q Consensus 485 ~~~~~s~~~~a~~~~~~~~~~~ 506 (895)
.+++|||+.++++++++|.+++
T Consensus 382 ~~~~fsw~~~~~~~~~~y~~~~ 403 (405)
T TIGR03449 382 HAAGFSWAATADGLLSSYRDAL 403 (405)
T ss_pred HHHhCCHHHHHHHHHHHHHHHh
Confidence 8889999999999999999765
No 10
>PRK00654 glgA glycogen synthase; Provisional
Probab=100.00 E-value=2.5e-40 Score=381.94 Aligned_cols=439 Identities=18% Similarity=0.198 Sum_probs=285.0
Q ss_pred eeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCccc
Q 002660 4 NNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 83 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~ 83 (895)
|||+|||.+.+ | -.-+||...++..|+++|+++| |+|+|+|+.+.. ....+..... ..........
T Consensus 1 m~i~~vs~e~~----P-----~~k~GGl~~~v~~L~~~L~~~G--~~V~v~~p~y~~--~~~~~~~~~~-~~~~~~~~~~ 66 (466)
T PRK00654 1 MKILFVASECA----P-----LIKTGGLGDVVGALPKALAALG--HDVRVLLPGYPA--IREKLRDAQV-VGRLDLFTVL 66 (466)
T ss_pred CeEEEEEcccc----c-----CcccCcHHHHHHHHHHHHHHCC--CcEEEEecCCcc--hhhhhcCceE-EEEeeeEEEE
Confidence 79999998875 1 1338999999999999999999 999999987532 1000000000 0000000000
Q ss_pred ccCCCCCCeEEEecCCCCCCcccccccCCCChHH------HHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchh
Q 002660 84 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPE------FVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGD 157 (895)
Q Consensus 84 ~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~------f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~ 157 (895)
......+|+++++++.. .+..+..+..+.+. |...++..+.+ + ..+|||||+|+|.+++
T Consensus 67 ~~~~~~~gv~v~~v~~~---~~~~~~~~y~~~d~~~r~~~f~~~~~~~~~~--------~----~~~pDiiH~h~w~~~~ 131 (466)
T PRK00654 67 FGHLEGDGVPVYLIDAP---HLFDRPSGYGYPDNGERFAFFSWAAAEFAEG--------L----DPRPDIVHAHDWHTGL 131 (466)
T ss_pred EEeEEcCCceEEEEeCH---HHcCCCCCCCCcChHHHHHHHHHHHHHHHHh--------c----CCCCceEEECCcHHHH
Confidence 00012358888888752 23333333333322 12222222221 1 1479999999999999
Q ss_pred HHHHHhccC-----CCCEEEEeCCCchhhHH--HHHHHhhccHHHHH-hhhhhhHHHHHHHhhhcccCEEEeCChHHHHH
Q 002660 158 SAALLSGAL-----NVPMLFTGHSLGRDKLE--QLLKQARLSRDEIN-ATYKIMRRIEAEELSLDASEIVITSTRQEIEE 229 (895)
Q Consensus 158 ~~~~~~~~~-----~ip~v~t~H~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~ 229 (895)
++..+++.. ++|+|+|+|++...... ..+..-.++..... ....+...+..++.++..||.|+++|+...++
T Consensus 132 ~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~e 211 (466)
T PRK00654 132 IPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYARE 211 (466)
T ss_pred HHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHH
Confidence 888887553 79999999998543210 00100000100000 00001111223556789999999999988777
Q ss_pred HHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCchhHHhhhhc
Q 002660 230 QWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPAS-PDPPIWSEIMRFF 308 (895)
Q Consensus 230 ~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 308 (895)
+...+..+. +... ++.+..++.+||||||.+.|.|..... ....+...... ........+++++
T Consensus 212 i~~~~~~~g--l~~~-----------~~~~~~ki~vI~NGid~~~~~p~~~~~--~~~~~~~~~~~~k~~~k~~l~~~~g 276 (466)
T PRK00654 212 ITTPEFGYG--LEGL-----------LRARSGKLSGILNGIDYDIWNPETDPL--LAANYSADDLEGKAENKRALQERFG 276 (466)
T ss_pred hccccCCcC--hHHH-----------HHhcccCceEecCCCCccccCCccCcc--cccccChhhhhchHHHHHHHHHHhC
Confidence 643211100 0000 112234899999999999998753211 00000000000 0011123345566
Q ss_pred CCC-CCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEe-
Q 002660 309 TNP-RKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAY- 386 (895)
Q Consensus 309 ~~~-~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~- 386 (895)
.++ +.++|+++||+.++||++.+++|++++.+ ...++ +++|+++. .+..++..++.+++. ++.+
T Consensus 277 l~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~--~~~~l-vivG~g~~---------~~~~~l~~l~~~~~~--~v~~~ 342 (466)
T PRK00654 277 LPDDDAPLFAMVSRLTEQKGLDLVLEALPELLE--QGGQL-VLLGTGDP---------ELEEAFRALAARYPG--KVGVQ 342 (466)
T ss_pred CCCCCCcEEEEeeccccccChHHHHHHHHHHHh--cCCEE-EEEecCcH---------HHHHHHHHHHHHCCC--cEEEE
Confidence 553 67899999999999999999999999863 23444 46787742 234567777777763 4554
Q ss_pred CCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccC------CCeEEeCCCCHHH
Q 002660 387 PKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVL------DNGLLVDPHDQQS 460 (895)
Q Consensus 387 ~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~------~~g~lv~p~d~~~ 460 (895)
.++ +.+.+..+|+.| |++|+||.+||||++++|||+||+|+|+++.||+.|++.++ .+|++++|.|+++
T Consensus 343 ~g~-~~~~~~~~~~~a----Dv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~ 417 (466)
T PRK00654 343 IGY-DEALAHRIYAGA----DMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAED 417 (466)
T ss_pred EeC-CHHHHHHHHhhC----CEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHH
Confidence 554 445567899999 99999999999999999999999999999999999999887 8999999999999
Q ss_pred HHHHHHHHHh---CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccC
Q 002660 461 VADALLKLVA---DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKP 507 (895)
Q Consensus 461 la~ai~~ll~---~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~~~ 507 (895)
++++|.++++ +++.+.++++++++ ++|||+..+++|+++|++++.
T Consensus 418 la~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~lY~~~~~ 465 (466)
T PRK00654 418 LLRALRRALELYRQPPLWRALQRQAMA--QDFSWDKSAEEYLELYRRLLG 465 (466)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHhc--cCCChHHHHHHHHHHHHHHhh
Confidence 9999999987 67778888777753 689999999999999998764
No 11
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=100.00 E-value=2.9e-39 Score=367.51 Aligned_cols=396 Identities=40% Similarity=0.622 Sum_probs=301.3
Q ss_pred eEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccc
Q 002660 5 NYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 84 (895)
Q Consensus 5 ~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~ 84 (895)
||+|++.|+.+-+.+ | .|+.||+++++.+|+++|+++| |+|+|+|.....+... .
T Consensus 1 ~~~~~~~~~~~~~~~---~-~~~~GG~~~~~~~l~~~L~~~g--~~V~v~~~~~~~~~~~------~------------- 55 (398)
T cd03800 1 RIALISLHGSPLAQP---G-GADTGGQNVYVLELARALARLG--HEVDIFTRRIDDALPP------I------------- 55 (398)
T ss_pred CeEEEeccccccccC---C-CCCCCceeehHHHHHHHHhccC--ceEEEEEecCCcccCC------c-------------
Confidence 588899998644332 2 3789999999999999999999 9999999754321110 0
Q ss_pred cCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhc
Q 002660 85 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSG 164 (895)
Q Consensus 85 ~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~ 164 (895)
....+++.+++++..+. .+.++..+++++..|...+...+... ..+||+||+|.+..++++..+++
T Consensus 56 -~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~Div~~~~~~~~~~~~~~~~ 121 (398)
T cd03800 56 -VELAPGVRVVRVPAGPA-EYLPKEELWPYLDEFADDLLRFLRRE------------GGRPDLIHAHYWDSGLVALLLAR 121 (398)
T ss_pred -cccccceEEEecccccc-cCCChhhcchhHHHHHHHHHHHHHhc------------CCCccEEEEecCccchHHHHHHh
Confidence 11235889999887655 44555556666666666655554431 02799999999888888888899
Q ss_pred cCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHH
Q 002660 165 ALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERK 244 (895)
Q Consensus 165 ~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~ 244 (895)
..++|+|++.|+............ ..+....+...|+..++.+|.|+++|....+.+...+..
T Consensus 122 ~~~~~~i~~~h~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~-------- 184 (398)
T cd03800 122 RLGIPLVHTFHSLGAVKRRHLGAA---------DTYEPARRIEAEERLLRAADRVIASTPQEAEELYSLYGA-------- 184 (398)
T ss_pred hcCCceEEEeecccccCCcccccc---------cccchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHHccc--------
Confidence 999999999998764332111000 000112223346778999999999999887776655432
Q ss_pred HHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCC
Q 002660 245 LRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDP 324 (895)
Q Consensus 245 l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~ 324 (895)
+..++.+||||+|.+.|.+..... ..+......+++++|+++||+.+
T Consensus 185 --------------~~~~~~vi~ng~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~i~~~gr~~~ 231 (398)
T cd03800 185 --------------YPRRIRVVPPGVDLERFTPYGRAE-------------------ARRARLLRDPDKPRILAVGRLDP 231 (398)
T ss_pred --------------cccccEEECCCCCccceecccchh-------------------hHHHhhccCCCCcEEEEEccccc
Confidence 112689999999998886533110 01222334567889999999999
Q ss_pred CCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhc
Q 002660 325 KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAK 404 (895)
Q Consensus 325 ~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~ 404 (895)
.||++.+++|+..+.+..+...+ +++|++..... .....++...++.+++.+++.|+|+++.+++..+|+.|
T Consensus 232 ~k~~~~ll~a~~~l~~~~~~~~l-~i~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a-- 303 (398)
T cd03800 232 RKGIDTLIRAYAELPELRERANL-VIVGGPRDDIL-----AMDEEELRELARELGVIDRVDFPGRVSREDLPALYRAA-- 303 (398)
T ss_pred ccCHHHHHHHHHHHHHhCCCeEE-EEEECCCCcch-----hhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHHhC--
Confidence 99999999999999754333344 46777653211 11234567778888998999999999999999999999
Q ss_pred CCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Q 002660 405 TKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLK 484 (895)
Q Consensus 405 ~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~ 484 (895)
|++++||..|++|++++|||+||+|||+++.||..|++.++.+|++++++|+++++++|.+++++++.++++++++++
T Consensus 304 --di~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~a~~ 381 (398)
T cd03800 304 --DVFVNPALYEPFGLTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDPALRRRLSRAGLR 381 (398)
T ss_pred --CEEEecccccccCcHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hh-hcCCHHHHHHHHH
Q 002660 485 NI-HLFSWPEHCKTYL 499 (895)
Q Consensus 485 ~~-~~~s~~~~a~~~~ 499 (895)
.+ ++|||+.++++|+
T Consensus 382 ~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 382 RARARYTWERVAARLL 397 (398)
T ss_pred HHHHhCCHHHHHHHHh
Confidence 99 7999999999886
No 12
>PLN02939 transferase, transferring glycosyl groups
Probab=100.00 E-value=7.1e-39 Score=373.83 Aligned_cols=447 Identities=17% Similarity=0.164 Sum_probs=293.5
Q ss_pred eeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcc-cc-----cCCC
Q 002660 4 NNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPT-EM-----LTPR 77 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~-e~-----~~~~ 77 (895)
|||+|||.-.. .-.-+||..-++..|.++|++.| |+|.|+++.+..-.......... +. +. .
T Consensus 482 mkILfVasE~a---------P~aKtGGLaDVv~sLPkAL~~~G--hdV~VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~-g 549 (977)
T PLN02939 482 LHIVHIAAEMA---------PVAKVGGLADVVSGLGKALQKKG--HLVEIVLPKYDCMQYDQIRNLKVLDVVVESYFD-G 549 (977)
T ss_pred CEEEEEEcccc---------cccccccHHHHHHHHHHHHHHcC--CeEEEEeCCCcccChhhhhcccccceEEEEeec-C
Confidence 89999995543 12568999999999999999999 99999999875321110000000 00 00 0
Q ss_pred CCCcccccCCCCCCeEEEecCCC-CCCcccccccCCCChH---HHH---HHHHHHHHHhhhhhhcccCCCCCCCCcEEEe
Q 002660 78 NSDDFMDDMGESSGAYIIRIPFG-PKDKYIAKELLWPHIP---EFV---DGALNHIIRMSNVLGEQIGGGKPVWPVAIHG 150 (895)
Q Consensus 78 ~~~~~~~~~~~~~gv~i~~i~~~-~~~~~~~~~~~~~~l~---~f~---~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~ 150 (895)
..+...-.....+|+.++.+... +. .|+.+..+..+-+ +|. ..++.++.. ..++||||||
T Consensus 550 ~~~~~~v~~~~~~GV~vyfId~~~~~-~fF~R~~iYg~~Dn~~RF~~FsrAaLe~~~~------------~~~~PDIIH~ 616 (977)
T PLN02939 550 NLFKNKIWTGTVEGLPVYFIEPQHPS-KFFWRAQYYGEHDDFKRFSYFSRAALELLYQ------------SGKKPDIIHC 616 (977)
T ss_pred ceeEEEEEEEEECCeeEEEEecCCch-hccCCCCCCCCccHHHHHHHHHHHHHHHHHh------------cCCCCCEEEE
Confidence 00000001112346777777531 21 2333333332221 222 112222111 1267999999
Q ss_pred ccccchhHHHHHhc------cCCCCEEEEeCCCchhhHHH--HHHHhhccHHHHH---h-hhhhhHHHHHHHhhhcccCE
Q 002660 151 HYADAGDSAALLSG------ALNVPMLFTGHSLGRDKLEQ--LLKQARLSRDEIN---A-TYKIMRRIEAEELSLDASEI 218 (895)
Q Consensus 151 h~~~~~~~~~~~~~------~~~ip~v~t~H~~~~~~~~~--~~~~~~~~~~~~~---~-~~~~~~~~~~e~~~l~~ad~ 218 (895)
|.|.+++++..+.+ ..++|+|+|+|++.++.... .+..-.++...+. . ...+...+...+..+..||.
T Consensus 617 HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~~~~~~iN~LK~GIv~AD~ 696 (977)
T PLN02939 617 HDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDNAHGRINVVKGAIVYSNI 696 (977)
T ss_pred CCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhhccCCchHHHHHHHHhCCe
Confidence 99988887443222 24589999999986543211 1110001111110 0 00011223334456778999
Q ss_pred EEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCC
Q 002660 219 VITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPA-SPD 297 (895)
Q Consensus 219 vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~-~~~ 297 (895)
|+++|+..++++...+.. ++... ++.+..++.+||||||++.|.|.....-. ..+..... ...
T Consensus 697 VtTVSptYA~EI~te~G~---GL~~~-----------L~~~~~Kl~gIlNGID~e~wnPatD~~L~--~~Ys~~dl~GK~ 760 (977)
T PLN02939 697 VTTVSPTYAQEVRSEGGR---GLQDT-----------LKFHSKKFVGILNGIDTDTWNPSTDRFLK--VQYNANDLQGKA 760 (977)
T ss_pred eEeeeHHHHHHHHHHhcc---chHHH-----------hccccCCceEEecceehhhcCCccccccc--cccChhhhhhhh
Confidence 999999998887652211 11111 23444589999999999999886421100 00000000 011
Q ss_pred CchhHHhhhhcCCC---CCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHH
Q 002660 298 PPIWSEIMRFFTNP---RKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKL 374 (895)
Q Consensus 298 ~~~~~~~~~~~~~~---~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~ 374 (895)
......+++++.+. +.++|+++||+.++||++.+++|+..+.. ....+ +|+|+|++ ..+..++..+
T Consensus 761 ~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~dvqL-VIvGdGp~--------~~~e~eL~~L 829 (977)
T PLN02939 761 ANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LGGQF-VLLGSSPV--------PHIQREFEGI 829 (977)
T ss_pred hhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cCCEE-EEEeCCCc--------HHHHHHHHHH
Confidence 12234455666653 56899999999999999999999988753 33333 57898864 2234677788
Q ss_pred HHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhcccc--------
Q 002660 375 IDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV-------- 446 (895)
Q Consensus 375 ~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~-------- 446 (895)
+.+++..++|.|+|.++......+|+.| |+||+||++||||++++|||+||+|+|++++||..|+|.+
T Consensus 830 a~~l~l~drV~FlG~~de~lah~IYAaA----DIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~ 905 (977)
T PLN02939 830 ADQFQSNNNIRLILKYDEALSHSIYAAS----DMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPV 905 (977)
T ss_pred HHHcCCCCeEEEEeccCHHHHHHHHHhC----CEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCcccccc
Confidence 8999988999999997766677899999 9999999999999999999999999999999999998865
Q ss_pred -CCCeEEeCCCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccCC
Q 002660 447 -LDNGLLVDPHDQQSVADALLKLVA----DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPR 508 (895)
Q Consensus 447 -~~~g~lv~p~d~~~la~ai~~ll~----~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~~~~ 508 (895)
+.+|++|+|.|+++++++|.+++. +++.|++++++++. +.|||+.++++|.++|++++.+
T Consensus 906 eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am~--~dFSWe~~A~qYeeLY~~ll~~ 970 (977)
T PLN02939 906 ELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDMN--IDFSWDSSASQYEELYQRAVAR 970 (977)
T ss_pred CCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH--hcCCHHHHHHHHHHHHHHHHHh
Confidence 468999999999999999999875 79999999886643 6899999999999999998754
No 13
>PRK10307 putative glycosyl transferase; Provisional
Probab=100.00 E-value=8.6e-39 Score=365.26 Aligned_cols=399 Identities=16% Similarity=0.143 Sum_probs=286.5
Q ss_pred eeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCC--CCCCCcccccCCCCCCc
Q 002660 4 NNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVD--WSYGEPTEMLTPRNSDD 81 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~--~~y~~~~e~~~~~~~~~ 81 (895)
|||++++.+++ |+.||.+.++.+|+++|+++| |+|+|+|+....|... ..|.... .
T Consensus 1 mkIlii~~~~~-----------P~~~g~~~~~~~l~~~L~~~G--~~V~vit~~~~~~~~~~~~~~~~~~--~------- 58 (412)
T PRK10307 1 MKILVYGINYA-----------PELTGIGKYTGEMAEWLAARG--HEVRVITAPPYYPQWRVGEGYSAWR--Y------- 58 (412)
T ss_pred CeEEEEecCCC-----------CCccchhhhHHHHHHHHHHCC--CeEEEEecCCCCCCCCCCccccccc--c-------
Confidence 79999997776 789999999999999999999 9999999863322211 1111000 0
Q ss_pred ccccCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccc--cchhHH
Q 002660 82 FMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYA--DAGDSA 159 (895)
Q Consensus 82 ~~~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~--~~~~~~ 159 (895)
.....+|++++|++....... ..+.+... ...+.......+...+ ..+||+||+|.+ .....+
T Consensus 59 ---~~~~~~~i~v~r~~~~~~~~~-------~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~Div~~~~p~~~~~~~~ 123 (412)
T PRK10307 59 ---RRESEGGVTVWRCPLYVPKQP-------SGLKRLLH-LGSFALSSFFPLLAQR----RWRPDRVIGVVPTLFCAPGA 123 (412)
T ss_pred ---eeeecCCeEEEEccccCCCCc-------cHHHHHHH-HHHHHHHHHHHHhhcc----CCCCCEEEEeCCcHHHHHHH
Confidence 001135899999986322000 00111110 0001111111111111 156999999976 335566
Q ss_pred HHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCCh
Q 002660 160 ALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDP 239 (895)
Q Consensus 160 ~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~ 239 (895)
..+++..++|+|+++|+.+++.. ...+...... ..++... .|+++++.+|.|+++|+...+.+...
T Consensus 124 ~~~~~~~~~~~v~~~~d~~~~~~---~~~~~~~~~~---~~~~~~~--~~~~~~~~ad~ii~~S~~~~~~~~~~------ 189 (412)
T PRK10307 124 RLLARLSGARTWLHIQDYEVDAA---FGLGLLKGGK---VARLATA--FERSLLRRFDNVSTISRSMMNKAREK------ 189 (412)
T ss_pred HHHHHhhCCCEEEEeccCCHHHH---HHhCCccCcH---HHHHHHH--HHHHHHhhCCEEEecCHHHHHHHHHc------
Confidence 77888899999999999876442 1112211111 1122222 37778999999999999877765332
Q ss_pred HHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEE
Q 002660 240 VLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILAL 319 (895)
Q Consensus 240 ~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~v 319 (895)
|.+..++.+||||+|.+.|.+.... .....+.+++.++++++|+|+
T Consensus 190 -----------------~~~~~~i~vi~ngvd~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~i~~~ 235 (412)
T PRK10307 190 -----------------GVAAEKVIFFPNWSEVARFQPVADA-----------------DVDALRAQLGLPDGKKIVLYS 235 (412)
T ss_pred -----------------CCCcccEEEECCCcCHhhcCCCCcc-----------------chHHHHHHcCCCCCCEEEEEc
Confidence 1122389999999999888653210 011233445556677899999
Q ss_pred eCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHH
Q 002660 320 ARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEI 398 (895)
Q Consensus 320 grl~~~Kgi~~ll~A~~~l~~~~~~~~l~-livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~l 398 (895)
||+.+.||++.+++|++.+.+ .+++. +|+|+|+. .+++.++++.+++. +|.|+|+++.+++..+
T Consensus 236 G~l~~~kg~~~li~a~~~l~~---~~~~~l~ivG~g~~-----------~~~l~~~~~~~~l~-~v~f~G~~~~~~~~~~ 300 (412)
T PRK10307 236 GNIGEKQGLELVIDAARRLRD---RPDLIFVICGQGGG-----------KARLEKMAQCRGLP-NVHFLPLQPYDRLPAL 300 (412)
T ss_pred CccccccCHHHHHHHHHHhcc---CCCeEEEEECCChh-----------HHHHHHHHHHcCCC-ceEEeCCCCHHHHHHH
Confidence 999999999999999998842 34455 48898864 35566778888886 7999999999999999
Q ss_pred HHHhhcCCcEEEecCCCCC----CchHHHHHHHcCCCEEEcCCCC--chhccccCCCeEEeCCCCHHHHHHHHHHHHhCH
Q 002660 399 YRLAAKTKGVFINPAFIEP----FGLTLIEAAAHGLPIVATKNGG--PVDIHRVLDNGLLVDPHDQQSVADALLKLVADK 472 (895)
Q Consensus 399 y~~A~~~~dv~v~ps~~Eg----~gl~~~Ea~a~G~PVvas~~gg--~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~ 472 (895)
|+.| |++|+|+..|+ +|.+++||||||+|||+|+.|| ..+++. .+|++++++|+++++++|.++++++
T Consensus 301 ~~~a----Di~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l~~~~ 374 (412)
T PRK10307 301 LKMA----DCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAALARQA 374 (412)
T ss_pred HHhc----CEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHHHhCH
Confidence 9999 99999999988 5677899999999999999876 457776 6899999999999999999999999
Q ss_pred HHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHHcccCC
Q 002660 473 QLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAGCKPR 508 (895)
Q Consensus 473 ~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~~~~~~ 508 (895)
++++++++++++.+ ++|||+.++++|++.|++++.+
T Consensus 375 ~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~ 411 (412)
T PRK10307 375 LLRPKLGTVAREYAERTLDKENVLRQFIADIRGLVAE 411 (412)
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcC
Confidence 99999999999999 5999999999999999988753
No 14
>PLN02316 synthase/transferase
Probab=100.00 E-value=4.3e-39 Score=383.24 Aligned_cols=416 Identities=15% Similarity=0.134 Sum_probs=281.7
Q ss_pred ceeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcc-cccCCCCCCc
Q 002660 3 FNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPT-EMLTPRNSDD 81 (895)
Q Consensus 3 ~m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~-e~~~~~~~~~ 81 (895)
+|+|+|||.+.. |. .-+||...++..|+++|+++| |+|.|+|+.+............. ..+.... ..
T Consensus 587 pM~Il~VSsE~~----P~-----aKvGGLgDVV~sLp~ALa~~G--h~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~-~~ 654 (1036)
T PLN02316 587 PMHIVHIAVEMA----PI-----AKVGGLGDVVTSLSRAVQDLN--HNVDIILPKYDCLNLSHVKDLHYQRSYSWGG-TE 654 (1036)
T ss_pred CcEEEEEEcccC----CC-----CCcCcHHHHHHHHHHHHHHcC--CEEEEEecCCcccchhhcccceEEEEeccCC-EE
Confidence 489999998875 11 358999999999999999999 99999999865311100000000 0000000 00
Q ss_pred ccccCCCCCCeEEEecCCCCCCcccccccCCCCh---HHH---HHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccc
Q 002660 82 FMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHI---PEF---VDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADA 155 (895)
Q Consensus 82 ~~~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l---~~f---~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~ 155 (895)
..-.....+|+.++.+.... .++....+..+. .+| ...++.++.+ ...+|||||||+|.+
T Consensus 655 ~~v~~~~~~GV~vyfl~~~~--~~F~r~~~Yg~~Dd~~RF~~F~~Aale~l~~------------~~~~PDIIHaHDW~t 720 (1036)
T PLN02316 655 IKVWFGKVEGLSVYFLEPQN--GMFWAGCVYGCRNDGERFGFFCHAALEFLLQ------------SGFHPDIIHCHDWSS 720 (1036)
T ss_pred EEEEEEEECCcEEEEEeccc--cccCCCCCCCchhHHHHHHHHHHHHHHHHHh------------cCCCCCEEEECCChH
Confidence 00000112477777776421 122222222221 122 2222222211 125799999999988
Q ss_pred hhHHHHHhcc------CCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHH
Q 002660 156 GDSAALLSGA------LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEE 229 (895)
Q Consensus 156 ~~~~~~~~~~------~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~ 229 (895)
++++++++.. .++|+|+|+|++.... .. .+.++..||.|+++|+...++
T Consensus 721 alva~llk~~~~~~~~~~~p~V~TiHnl~~~~-------------------n~------lk~~l~~AD~ViTVS~tya~E 775 (1036)
T PLN02316 721 APVAWLFKDHYAHYGLSKARVVFTIHNLEFGA-------------------NH------IGKAMAYADKATTVSPTYSRE 775 (1036)
T ss_pred HHHHHHHHHhhhhhccCCCCEEEEeCCcccch-------------------hH------HHHHHHHCCEEEeCCHHHHHH
Confidence 8888887653 3589999999874211 00 113578999999999988877
Q ss_pred HHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCchhHHhhhh
Q 002660 230 QWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNP--ASPDPPIWSEIMRF 307 (895)
Q Consensus 230 ~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 307 (895)
+...+. +. .+..++.+||||||++.|.|.....-.. .+.... ..........++++
T Consensus 776 I~~~~~-l~-------------------~~~~Kl~vI~NGID~~~w~P~tD~~lp~--~y~~~~~~~gK~~~k~~Lr~~l 833 (1036)
T PLN02316 776 VSGNSA-IA-------------------PHLYKFHGILNGIDPDIWDPYNDNFIPV--PYTSENVVEGKRAAKEALQQRL 833 (1036)
T ss_pred HHhccC-cc-------------------cccCCEEEEECCccccccCCcccccccc--cCCchhhhhhhhhhHHHHHHHh
Confidence 654321 00 1123899999999999998754211000 000000 00001122345566
Q ss_pred cCC-CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCC--CCcE
Q 002660 308 FTN-PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDL--YGQV 384 (895)
Q Consensus 308 ~~~-~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l--~~~v 384 (895)
+++ ++.++|+++||+.++||++.|++|+..+.+ ....+ +|+|+|++ ..+..++..++.++++ .++|
T Consensus 834 GL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~--~~~ql-VIvG~Gpd--------~~~e~~l~~La~~Lg~~~~~rV 902 (1036)
T PLN02316 834 GLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLE--RNGQV-VLLGSAPD--------PRIQNDFVNLANQLHSSHHDRA 902 (1036)
T ss_pred CCCcccCeEEEEEeccccccCHHHHHHHHHHHhh--cCcEE-EEEeCCCC--------HHHHHHHHHHHHHhCccCCCeE
Confidence 665 367999999999999999999999998853 33444 57898864 2235677788888765 5689
Q ss_pred EeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccC-------------CCeE
Q 002660 385 AYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVL-------------DNGL 451 (895)
Q Consensus 385 ~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~-------------~~g~ 451 (895)
.|.+.++......+|+.| |+||+||++||||++++|||+||+|+|++++||+.|+|.++ .+|+
T Consensus 903 ~f~g~~de~lah~iyaaA----DiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGf 978 (1036)
T PLN02316 903 RLCLTYDEPLSHLIYAGA----DFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGF 978 (1036)
T ss_pred EEEecCCHHHHHHHHHhC----cEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceE
Confidence 888775332234799999 99999999999999999999999999999999999999874 5899
Q ss_pred EeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHHccc
Q 002660 452 LVDPHDQQSVADALLKLVAD-KQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAGCK 506 (895)
Q Consensus 452 lv~p~d~~~la~ai~~ll~~-~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~~~~ 506 (895)
+|++.|+++++.+|.+++.+ ++....++..+++.+ +.|||+..+++|+++|+++.
T Consensus 979 lf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 979 SFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSAR 1035 (1036)
T ss_pred EeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999986 355566788888887 58999999999999998764
No 15
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=100.00 E-value=2.5e-38 Score=359.52 Aligned_cols=367 Identities=20% Similarity=0.198 Sum_probs=271.0
Q ss_pred eEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccc
Q 002660 5 NYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 84 (895)
Q Consensus 5 ~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~ 84 (895)
||++++.... |..||+++++.+|+++|+++| |+|+|+|+....+. ..+
T Consensus 1 kI~~v~~~~~-----------p~~GG~e~~~~~la~~L~~~G--~~V~v~~~~~~~~~-------~~~------------ 48 (398)
T cd03796 1 RICMVSDFFY-----------PNLGGVETHIYQLSQCLIKRG--HKVVVITHAYGNRV-------GIR------------ 48 (398)
T ss_pred CeeEEeeccc-----------cccccHHHHHHHHHHHHHHcC--CeeEEEeccCCcCC-------Ccc------------
Confidence 7899986664 789999999999999999999 99999997532110 000
Q ss_pred cCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccch--hHHHHH
Q 002660 85 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAG--DSAALL 162 (895)
Q Consensus 85 ~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~--~~~~~~ 162 (895)
....+++++++|..+. .....+. ....+...+.+.+. +.+|||||+|..... ..+..+
T Consensus 49 --~~~~~i~v~~~p~~~~---~~~~~~~-~~~~~~~~l~~~~~--------------~~~~DiIh~~~~~~~~~~~~~~~ 108 (398)
T cd03796 49 --YLTNGLKVYYLPFVVF---YNQSTLP-TFFGTFPLLRNILI--------------RERITIVHGHQAFSALAHEALLH 108 (398)
T ss_pred --cccCceeEEEecceec---cCCcccc-chhhhHHHHHHHHH--------------hcCCCEEEECCCCchHHHHHHHH
Confidence 0124788888886432 1111111 11111111111111 167999999986433 345667
Q ss_pred hccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHH
Q 002660 163 SGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 242 (895)
Q Consensus 163 ~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~ 242 (895)
++..++|+|+|.|+.+.... . . ..+..+ .++..++.+|.++++|+...+.+.... ...
T Consensus 109 ~~~~~~~~v~t~h~~~~~~~--~------~-------~~~~~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~-~~~---- 166 (398)
T cd03796 109 ARTMGLKTVFTDHSLFGFAD--A------S-------SIHTNK--LLRFSLADVDHVICVSHTSKENTVLRA-SLD---- 166 (398)
T ss_pred hhhcCCcEEEEecccccccc--h------h-------hHHhhH--HHHHhhccCCEEEEecHhHhhHHHHHh-CCC----
Confidence 88889999999998643110 0 0 000111 134568899999999987665432221 112
Q ss_pred HHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCC
Q 002660 243 RKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARP 322 (895)
Q Consensus 243 ~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl 322 (895)
..++.+||||+|.+.|.+.... ..+++++++++||+
T Consensus 167 -----------------~~k~~vi~ngvd~~~f~~~~~~---------------------------~~~~~~~i~~~grl 202 (398)
T cd03796 167 -----------------PERVSVIPNAVDSSDFTPDPSK---------------------------RDNDKITIVVISRL 202 (398)
T ss_pred -----------------hhhEEEEcCccCHHHcCCCccc---------------------------CCCCceEEEEEecc
Confidence 2389999999999888753311 13567899999999
Q ss_pred CCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHH
Q 002660 323 DPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRL 401 (895)
Q Consensus 323 ~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~ 401 (895)
.+.||++.+++|+..+.+. .+++.+ ++|+++. ...+.++++++++.++|.|+|+++.+++..+|+.
T Consensus 203 ~~~Kg~~~li~a~~~l~~~--~~~~~l~i~G~g~~-----------~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ 269 (398)
T cd03796 203 VYRKGIDLLVGIIPEICKK--HPNVRFIIGGDGPK-----------RILLEEMREKYNLQDRVELLGAVPHERVRDVLVQ 269 (398)
T ss_pred chhcCHHHHHHHHHHHHhh--CCCEEEEEEeCCch-----------HHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHh
Confidence 9999999999999988643 345554 7888763 3556788889999999999999999999999999
Q ss_pred hhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Q 002660 402 AAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQN 481 (895)
Q Consensus 402 A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~ 481 (895)
| |++|+||..|+||++++||||||+|||+++.||..|++.++ .+++++ .|.++++++|.++++++.+...++.+
T Consensus 270 a----d~~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~~-~~~~~~-~~~~~l~~~l~~~l~~~~~~~~~~~~ 343 (398)
T cd03796 270 G----HIFLNTSLTEAFCIAIVEAASCGLLVVSTRVGGIPEVLPPD-MILLAE-PDVESIVRKLEEAISILRTGKHDPWS 343 (398)
T ss_pred C----CEEEeCChhhccCHHHHHHHHcCCCEEECCCCCchhheeCC-ceeecC-CCHHHHHHHHHHHHhChhhhhhHHHH
Confidence 9 99999999999999999999999999999999999999764 345554 48999999999999987766677888
Q ss_pred HHHHh-hcCCHHHHHHHHHHHHHcccCC
Q 002660 482 GLKNI-HLFSWPEHCKTYLSRIAGCKPR 508 (895)
Q Consensus 482 ~~~~~-~~~s~~~~a~~~~~~~~~~~~~ 508 (895)
+++.+ ++|||+..+++++++|++++..
T Consensus 344 ~~~~~~~~fs~~~~~~~~~~~y~~l~~~ 371 (398)
T cd03796 344 FHNRVKKMYSWEDVAKRTEKVYDRILQT 371 (398)
T ss_pred HHHHHHhhCCHHHHHHHHHHHHHHHhcC
Confidence 88888 6999999999999999998753
No 16
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=100.00 E-value=1.6e-38 Score=368.75 Aligned_cols=441 Identities=18% Similarity=0.174 Sum_probs=287.0
Q ss_pred eeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCC-CCCccccc---CCCCC
Q 002660 4 NNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWS-YGEPTEML---TPRNS 79 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~-y~~~~e~~---~~~~~ 79 (895)
|||+|+|.... | -.-+||...++..|+++|+++| |+|.|+++.+..-..... ........ .....
T Consensus 1 m~i~~vs~E~~----P-----~~k~GGl~~~v~~L~~aL~~~G--~~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (473)
T TIGR02095 1 MRVLFVAAEMA----P-----FAKTGGLADVVGALPKALAALG--HDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRT 69 (473)
T ss_pred CeEEEEEeccc----c-----ccCcCcHHHHHHHHHHHHHHcC--CeEEEEecCCcChhhhhccCeEEEEEEEEeecCce
Confidence 79999997764 1 1348999999999999999999 999999987643111000 00000000 00000
Q ss_pred CcccccCCCCCCeEEEecCCCCCCccccc-ccCCC--C---hHH---HHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEe
Q 002660 80 DDFMDDMGESSGAYIIRIPFGPKDKYIAK-ELLWP--H---IPE---FVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHG 150 (895)
Q Consensus 80 ~~~~~~~~~~~gv~i~~i~~~~~~~~~~~-~~~~~--~---l~~---f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~ 150 (895)
....-.....+|++++++.... ++.+ ..+.. + ..+ |...++..+.+ ...+|||||+
T Consensus 70 ~~~~~~~~~~~~v~~~~i~~~~---~~~r~~~~y~~~~~d~~~r~~~f~~a~~~~~~~------------~~~~~DiiH~ 134 (473)
T TIGR02095 70 LYVKVFEGVVEGVPVYFIDNPS---LFDRPGGIYGDDYPDNAERFAFFSRAAAELLSG------------LGWQPDVVHA 134 (473)
T ss_pred eEEEEEEEEECCceEEEEECHH---HcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHh------------cCCCCCEEEE
Confidence 0000001123578888876532 1111 01111 1 112 22222222211 1267999999
Q ss_pred ccccchhHHHHHhccCC---CCEEEEeCCCchhhH--HHHHHHhhccHHHHH-hhhhhhHHHHHHHhhhcccCEEEeCCh
Q 002660 151 HYADAGDSAALLSGALN---VPMLFTGHSLGRDKL--EQLLKQARLSRDEIN-ATYKIMRRIEAEELSLDASEIVITSTR 224 (895)
Q Consensus 151 h~~~~~~~~~~~~~~~~---ip~v~t~H~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~e~~~l~~ad~vi~~s~ 224 (895)
|.|.+++++..+++..+ +|+|+|+|++..... ...+....++..... ..+.+...+..++.++..||.|+++|+
T Consensus 135 hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~ 214 (473)
T TIGR02095 135 HDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSP 214 (473)
T ss_pred CCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecCH
Confidence 99999999888887766 999999999864321 001111000100000 011111123345678999999999999
Q ss_pred HHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCchhHH
Q 002660 225 QEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDN-PASPDPPIWSE 303 (895)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 303 (895)
...+++....... .+...+ ..+..++.+||||||.+.|.|.....-. ..+... ...........
T Consensus 215 ~~~~ei~~~~~~~--~l~~~l-----------~~~~~ki~~I~NGid~~~~~p~~~~~~~--~~~~~~~~~~k~~~k~~l 279 (473)
T TIGR02095 215 TYAREILTPEFGY--GLDGVL-----------KARSGKLRGILNGIDTEVWNPATDPYLK--ANYSADDLAGKAENKEAL 279 (473)
T ss_pred hHHHHhcCCcCCc--cchhHH-----------HhcCCCeEEEeCCCCccccCCCCCcccc--cCcCccchhhhhhhHHHH
Confidence 8877764321110 000001 0122489999999999999875321100 000000 00011112233
Q ss_pred hhhhcCCC--CCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCC
Q 002660 304 IMRFFTNP--RKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY 381 (895)
Q Consensus 304 ~~~~~~~~--~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~ 381 (895)
+++++.+. +.++|+++||+.++||++.+++|+.++.+ ...++ +|+|+++. ++..++..++.+++
T Consensus 280 ~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~~l-vi~G~g~~---------~~~~~l~~~~~~~~-- 345 (473)
T TIGR02095 280 QEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLE--LGGQL-VVLGTGDP---------ELEEALRELAERYP-- 345 (473)
T ss_pred HHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHH--cCcEE-EEECCCCH---------HHHHHHHHHHHHCC--
Confidence 45565554 78999999999999999999999999863 22333 47788751 23455666666554
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccC------CCeEEeCC
Q 002660 382 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVL------DNGLLVDP 455 (895)
Q Consensus 382 ~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~------~~g~lv~p 455 (895)
.++.|.+.++.+++..+|+.| |++|+||.+||||++++|||+||+|+|+++.||..|++.++ .+|++++|
T Consensus 346 ~~v~~~~~~~~~~~~~~~~~a----Dv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~ 421 (473)
T TIGR02095 346 GNVRVIIGYDEALAHLIYAGA----DFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEE 421 (473)
T ss_pred CcEEEEEcCCHHHHHHHHHhC----CEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCC
Confidence 568887877777889999999 99999999999999999999999999999999999999988 89999999
Q ss_pred CCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcc
Q 002660 456 HDQQSVADALLKLVA----DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGC 505 (895)
Q Consensus 456 ~d~~~la~ai~~ll~----~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~ 505 (895)
.|+++++++|.+++. +++.++++++++++ ++|||+.++++|+++|+++
T Consensus 422 ~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~~Y~~l 473 (473)
T TIGR02095 422 YDPGALLAALSRALRLYRQDPSLWEALQKNAMS--QDFSWDKSAKQYVELYRSL 473 (473)
T ss_pred CCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhc--cCCCcHHHHHHHHHHHHhC
Confidence 999999999999988 89999999887753 5899999999999999864
No 17
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=100.00 E-value=1e-37 Score=360.93 Aligned_cols=377 Identities=19% Similarity=0.205 Sum_probs=272.3
Q ss_pred cceeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCc
Q 002660 2 IFNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDD 81 (895)
Q Consensus 2 ~~m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~ 81 (895)
-.|||+++. |.. + .+..||++.++.+|+++|+++| |+|+|+|+....+. +
T Consensus 57 ~~mrI~~~~-~~~--------~-~~~~gG~~~~~~~l~~~L~~~G--~eV~vlt~~~~~~~---------~--------- 106 (465)
T PLN02871 57 RPRRIALFV-EPS--------P-FSYVSGYKNRFQNFIRYLREMG--DEVLVVTTDEGVPQ---------E--------- 106 (465)
T ss_pred CCceEEEEE-CCc--------C-CcccccHHHHHHHHHHHHHHCC--CeEEEEecCCCCCc---------c---------
Confidence 358999986 332 1 2578999999999999999999 99999997532111 0
Q ss_pred ccccCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEecccc-chhHHH
Q 002660 82 FMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYAD-AGDSAA 160 (895)
Q Consensus 82 ~~~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~-~~~~~~ 160 (895)
..++++++++..+. .+.... .+.. .+...+...+++ .+||+||+|... ..+.+.
T Consensus 107 -------~~g~~v~~~~~~~~-~~~~~~-~~~~--~~~~~l~~~i~~--------------~kpDiIh~~~~~~~~~~~~ 161 (465)
T PLN02871 107 -------FHGAKVIGSWSFPC-PFYQKV-PLSL--ALSPRIISEVAR--------------FKPDLIHASSPGIMVFGAL 161 (465)
T ss_pred -------ccCceeeccCCcCC-ccCCCc-eeec--cCCHHHHHHHHh--------------CCCCEEEECCCchhHHHHH
Confidence 12555554433221 111110 0000 111122222322 679999999863 344555
Q ss_pred HHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChH
Q 002660 161 LLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPV 240 (895)
Q Consensus 161 ~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~ 240 (895)
.+++..++|+|++.|+......... ... ...+... ..++...+.+|.|+++|+...+.+...+.
T Consensus 162 ~~ak~~~ip~V~~~h~~~~~~~~~~------~~~---~~~~~~~--~~~r~~~~~ad~ii~~S~~~~~~l~~~~~----- 225 (465)
T PLN02871 162 FYAKLLCVPLVMSYHTHVPVYIPRY------TFS---WLVKPMW--DIIRFLHRAADLTLVTSPALGKELEAAGV----- 225 (465)
T ss_pred HHHHHhCCCEEEEEecCchhhhhcc------cch---hhHHHHH--HHHHHHHhhCCEEEECCHHHHHHHHHcCC-----
Confidence 6778889999999998754332111 000 0011111 12455688999999999987776654321
Q ss_pred HHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhc-CCCCCcEEEEE
Q 002660 241 LERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFF-TNPRKPVILAL 319 (895)
Q Consensus 241 ~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~il~v 319 (895)
.+..++.+||||+|.+.|.+..... ..+.++. ..+++++|+|+
T Consensus 226 -----------------~~~~kv~vi~nGvd~~~f~p~~~~~-------------------~~~~~~~~~~~~~~~i~~v 269 (465)
T PLN02871 226 -----------------TAANRIRVWNKGVDSESFHPRFRSE-------------------EMRARLSGGEPEKPLIVYV 269 (465)
T ss_pred -----------------CCcCeEEEeCCccCccccCCccccH-------------------HHHHHhcCCCCCCeEEEEe
Confidence 1123899999999999987643110 1111221 23467899999
Q ss_pred eCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHH
Q 002660 320 ARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIY 399 (895)
Q Consensus 320 grl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly 399 (895)
||+.+.||++.++++++.+. +..+ +|+|+|+. .+++.+++.. .+|.|+|+++.+++..+|
T Consensus 270 Grl~~~K~~~~li~a~~~~~----~~~l-~ivG~G~~-----------~~~l~~~~~~----~~V~f~G~v~~~ev~~~~ 329 (465)
T PLN02871 270 GRLGAEKNLDFLKRVMERLP----GARL-AFVGDGPY-----------REELEKMFAG----TPTVFTGMLQGDELSQAY 329 (465)
T ss_pred CCCchhhhHHHHHHHHHhCC----CcEE-EEEeCChH-----------HHHHHHHhcc----CCeEEeccCCHHHHHHHH
Confidence 99999999999999998773 2333 48898764 2334444442 369999999999999999
Q ss_pred HHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhcccc---CCCeEEeCCCCHHHHHHHHHHHHhCHHHHH
Q 002660 400 RLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV---LDNGLLVDPHDQQSVADALLKLVADKQLWA 476 (895)
Q Consensus 400 ~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~---~~~g~lv~p~d~~~la~ai~~ll~~~~~~~ 476 (895)
+.| |++|+||..|+||++++||||||+|||+++.||..|++.+ +.+|++++|+|+++++++|.+++++++.++
T Consensus 330 ~~a----Dv~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~ 405 (465)
T PLN02871 330 ASG----DVFVMPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLADPELRE 405 (465)
T ss_pred HHC----CEEEECCcccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhCHHHHH
Confidence 999 9999999999999999999999999999999999999998 899999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCHHHHHHHHHH-HHHcccCCC
Q 002660 477 RCRQNGLKNIHLFSWPEHCKTYLS-RIAGCKPRH 509 (895)
Q Consensus 477 ~~~~~~~~~~~~~s~~~~a~~~~~-~~~~~~~~~ 509 (895)
++++++++.+++|||+.+++++++ .|+++....
T Consensus 406 ~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~~ 439 (465)
T PLN02871 406 RMGAAAREEVEKWDWRAATRKLRNEQYSAAIWFW 439 (465)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998 698887654
No 18
>PRK14099 glycogen synthase; Provisional
Probab=100.00 E-value=1.3e-37 Score=357.84 Aligned_cols=449 Identities=18% Similarity=0.144 Sum_probs=281.3
Q ss_pred CcceeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCc--ccccCCCC
Q 002660 1 MIFNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEP--TEMLTPRN 78 (895)
Q Consensus 1 ~~~m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~--~e~~~~~~ 78 (895)
|.-|||+|+|.-.. | =.-+||..-++..|.++|+++| |+|.|+++.+..= ....... ...+.. .
T Consensus 1 ~~~~~il~v~~E~~----p-----~~k~ggl~dv~~~lp~~l~~~g--~~v~v~~P~y~~~--~~~~~~~~~~~~~~~-~ 66 (485)
T PRK14099 1 MTPLRVLSVASEIF----P-----LIKTGGLADVAGALPAALKAHG--VEVRTLVPGYPAV--LAGIEDAEQVHSFPD-L 66 (485)
T ss_pred CCCcEEEEEEeccc----c-----ccCCCcHHHHHHHHHHHHHHCC--CcEEEEeCCCcch--hhhhcCceEEEEEee-e
Confidence 77899999995553 1 2679999999999999999999 9999999976431 0000000 000000 0
Q ss_pred CC-cccccCCCCCCeEEEecCCCCCCccccccc-CC------CChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEe
Q 002660 79 SD-DFMDDMGESSGAYIIRIPFGPKDKYIAKEL-LW------PHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHG 150 (895)
Q Consensus 79 ~~-~~~~~~~~~~gv~i~~i~~~~~~~~~~~~~-~~------~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~ 150 (895)
.. ...-.....+|+.++.+... .++.+.. +. +|.+.+.+.+ .+-+.....+ ..+ ...++|||||+
T Consensus 67 ~~~~~~~~~~~~~~v~~~~~~~~---~~f~r~~~~y~~~~~~~~~d~~~rf~-~f~~a~~~~~-~~~--~~~~~pDIiH~ 139 (485)
T PRK14099 67 FGGPARLLAARAGGLDLFVLDAP---HLYDRPGNPYVGPDGKDWPDNAQRFA-ALARAAAAIG-QGL--VPGFVPDIVHA 139 (485)
T ss_pred CCceEEEEEEEeCCceEEEEeCh---HhhCCCCCCCCCccCCCCCcHHHHHH-HHHHHHHHHH-hhh--ccCCCCCEEEE
Confidence 00 00000011235655555321 1111110 11 1222211111 0101111111 100 01268999999
Q ss_pred ccccchhHHHHHhc--cCCCCEEEEeCCCchhhH--HHHHH-HhhccHHHHH-hhhhhhHHHHHHHhhhcccCEEEeCCh
Q 002660 151 HYADAGDSAALLSG--ALNVPMLFTGHSLGRDKL--EQLLK-QARLSRDEIN-ATYKIMRRIEAEELSLDASEIVITSTR 224 (895)
Q Consensus 151 h~~~~~~~~~~~~~--~~~ip~v~t~H~~~~~~~--~~~~~-~~~~~~~~~~-~~~~~~~~~~~e~~~l~~ad~vi~~s~ 224 (895)
|.|.+++++.++.. ..++|+|+|+|++..... ...+. .|. +..... ....+...+...+..+..||.|+++|+
T Consensus 140 Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~ 218 (485)
T PRK14099 140 HDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGL-PPSAFSLDGVEYYGGIGYLKAGLQLADRITTVSP 218 (485)
T ss_pred CCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCC-ChHHcCchhhhhCCCccHHHHHHHhcCeeeecCh
Confidence 99988888876653 346899999999854321 00110 111 111000 000111112235667999999999999
Q ss_pred HHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CchhHH
Q 002660 225 QEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPD-PPIWSE 303 (895)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 303 (895)
..++++...+... .+...| +.+..++.+||||||++.|.|.....-. ..+........ ......
T Consensus 219 ~~a~ei~~~~~g~--gl~~~l-----------~~~~~ki~vI~NGID~~~f~p~~~~~~~--~~~~~~~~~~k~~~k~~l 283 (485)
T PRK14099 219 TYALEIQGPEAGM--GLDGLL-----------RQRADRLSGILNGIDTAVWNPATDELIA--ATYDVETLAARAANKAAL 283 (485)
T ss_pred hHHHHHhcccCCc--ChHHHH-----------HhhCCCeEEEecCCchhhccccccchhh--hcCChhHHHhHHHhHHHH
Confidence 8887765432111 000111 1122489999999999999875421100 00000000000 001223
Q ss_pred hhhhcCC--CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCC
Q 002660 304 IMRFFTN--PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY 381 (895)
Q Consensus 304 ~~~~~~~--~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~ 381 (895)
+++++.+ ++.++|+++||+.++||++.+++|+..+.+ ....+ +++|+|+. ++..++.+++.++.
T Consensus 284 ~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~--~~~~l-vivG~G~~---------~~~~~l~~l~~~~~-- 349 (485)
T PRK14099 284 QARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLG--EGAQL-ALLGSGDA---------ELEARFRAAAQAYP-- 349 (485)
T ss_pred HHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHh--cCcEE-EEEecCCH---------HHHHHHHHHHHHCC--
Confidence 4455554 356899999999999999999999998853 23344 47788752 23455666666654
Q ss_pred CcE-EeCCCCCCCCHHHHHH-HhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccC---------CCe
Q 002660 382 GQV-AYPKHHKQSDVPEIYR-LAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVL---------DNG 450 (895)
Q Consensus 382 ~~v-~~~g~~~~~el~~ly~-~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~---------~~g 450 (895)
+++ .|.|+ .++++.+|. .| |+||+||.+||||++.+|||+||+|+|++++||..|+|.++ .+|
T Consensus 350 ~~v~~~~G~--~~~l~~~~~a~a----Difv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G 423 (485)
T PRK14099 350 GQIGVVIGY--DEALAHLIQAGA----DALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATG 423 (485)
T ss_pred CCEEEEeCC--CHHHHHHHHhcC----CEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCce
Confidence 344 78898 788999885 58 99999999999999999999999988889999999998775 589
Q ss_pred EEeCCCCHHHHHHHHHH---HHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccCC
Q 002660 451 LLVDPHDQQSVADALLK---LVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPR 508 (895)
Q Consensus 451 ~lv~p~d~~~la~ai~~---ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~~~~ 508 (895)
++++|.|+++++++|.+ ++++++.+++++++++. ++|||+..+++|+++|++++..
T Consensus 424 ~l~~~~d~~~La~ai~~a~~l~~d~~~~~~l~~~~~~--~~fSw~~~a~~y~~lY~~l~~~ 482 (485)
T PRK14099 424 VQFSPVTADALAAALRKTAALFADPVAWRRLQRNGMT--TDVSWRNPAQHYAALYRSLVAE 482 (485)
T ss_pred EEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHhhh--hcCChHHHHHHHHHHHHHHHhh
Confidence 99999999999999997 66799999999998863 6899999999999999998753
No 19
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=100.00 E-value=1.3e-37 Score=353.02 Aligned_cols=378 Identities=22% Similarity=0.268 Sum_probs=275.4
Q ss_pred eeEeeeecccccccCcccCCCCCC-CCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcc
Q 002660 4 NNYFACSIHGLIRGENMELGRDSD-TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDF 82 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~~-~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~ 82 (895)
|||++|+.... |+ .||.++++.+|+++|+++ |+|+|+|.... ..
T Consensus 1 mkI~~i~~~~~-----------p~~~GG~~~~v~~l~~~l~~~---~~v~v~~~~~~--~~------------------- 45 (388)
T TIGR02149 1 MKVTVLTREYP-----------PNVYGGAGVHVEELTRELARL---MDVDVRCFGDQ--RF------------------- 45 (388)
T ss_pred CeeEEEecccC-----------ccccccHhHHHHHHHHHHHHh---cCeeEEcCCCc--hh-------------------
Confidence 79999986553 66 499999999999999886 57777765321 00
Q ss_pred cccCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHH
Q 002660 83 MDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALL 162 (895)
Q Consensus 83 ~~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~ 162 (895)
...++.+.+++.... +. .....+..+...+. .. . ...+||+||+|.+.+++.+..+
T Consensus 46 -----~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~-~~-------~------~~~~~divh~~~~~~~~~~~~~ 101 (388)
T TIGR02149 46 -----DSEGLTVKGYRPWSE---LK--EANKALGTFSVDLA-MA-------N------DPVDADVVHSHTWYTFLAGHLA 101 (388)
T ss_pred -----cCCCeEEEEecChhh---cc--chhhhhhhhhHHHH-Hh-------h------CCCCCCeEeecchhhhhHHHHH
Confidence 013777777653211 10 01111111111110 00 0 0146999999998777777777
Q ss_pred hccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHH
Q 002660 163 SGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 242 (895)
Q Consensus 163 ~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~ 242 (895)
++..++|+|++.|+..+...... ......+.+..+ .++..++.+|.|+++|+...+.+...+....+
T Consensus 102 ~~~~~~p~v~~~h~~~~~~~~~~--------~~~~~~~~~~~~--~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~--- 168 (388)
T TIGR02149 102 KKLYDKPLVVTAHSLEPLRPWKE--------EQLGGGYKLSSW--AEKTAIEAADRVIAVSGGMREDILKYYPDLDP--- 168 (388)
T ss_pred HHhcCCCEEEEeecccccccccc--------cccccchhHHHH--HHHHHHhhCCEEEEccHHHHHHHHHHcCCCCc---
Confidence 77789999999999754221000 000001122223 26678999999999999887776665533333
Q ss_pred HHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCC
Q 002660 243 RKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARP 322 (895)
Q Consensus 243 ~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl 322 (895)
.++.+||||+|.+.|.+.. ....+.+++.++++++|+++||+
T Consensus 169 ------------------~~i~vi~ng~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~i~~~Grl 210 (388)
T TIGR02149 169 ------------------EKVHVIYNGIDTKEYKPDD--------------------GNVVLDRYGIDRSRPYILFVGRI 210 (388)
T ss_pred ------------------ceEEEecCCCChhhcCCCc--------------------hHHHHHHhCCCCCceEEEEEccc
Confidence 2899999999998886532 11234455556778899999999
Q ss_pred CCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCC-CcEE-eCCCCCCCCHHHHHH
Q 002660 323 DPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY-GQVA-YPKHHKQSDVPEIYR 400 (895)
Q Consensus 323 ~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~-~~v~-~~g~~~~~el~~ly~ 400 (895)
.+.||++.+++|++.+. +...+ +++|++++. .++..++.+.+..++.. .++. +.+.++.+++..+|+
T Consensus 211 ~~~Kg~~~li~a~~~l~---~~~~l-~i~g~g~~~-------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 279 (388)
T TIGR02149 211 TRQKGVPHLLDAVHYIP---KDVQV-VLCAGAPDT-------PEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLS 279 (388)
T ss_pred ccccCHHHHHHHHHHHh---hcCcE-EEEeCCCCc-------HHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHH
Confidence 99999999999999883 33344 355655432 22345666666666652 3455 467899999999999
Q ss_pred HhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCH------HHHHHHHHHHHhCHHH
Q 002660 401 LAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQ------QSVADALLKLVADKQL 474 (895)
Q Consensus 401 ~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~------~~la~ai~~ll~~~~~ 474 (895)
.| |++|+||..|+||++++|||+||+|||+++.||..|++.++.+|++++++|. ++++++|.+++++++.
T Consensus 280 ~a----Dv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~ 355 (388)
T TIGR02149 280 NA----EVFVCPSIYEPLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLADPEL 355 (388)
T ss_pred hC----CEEEeCCccCCCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhCHHH
Confidence 99 9999999999999999999999999999999999999999999999999998 9999999999999999
Q ss_pred HHHHHHHHHHHh-hcCCHHHHHHHHHHHHHccc
Q 002660 475 WARCRQNGLKNI-HLFSWPEHCKTYLSRIAGCK 506 (895)
Q Consensus 475 ~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~~~~ 506 (895)
+++++.++++.+ ++|||+.+++++.++|++++
T Consensus 356 ~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~~ 388 (388)
T TIGR02149 356 AKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKVL 388 (388)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhC
Confidence 999999999998 69999999999999998763
No 20
>PRK14098 glycogen synthase; Provisional
Probab=100.00 E-value=4.6e-37 Score=353.71 Aligned_cols=450 Identities=14% Similarity=0.112 Sum_probs=283.6
Q ss_pred ceeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCC-CCCCCc--ccccC-C-C
Q 002660 3 FNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVD-WSYGEP--TEMLT-P-R 77 (895)
Q Consensus 3 ~m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~-~~y~~~--~e~~~-~-~ 77 (895)
||||+|+|.--. | =.-+||..-++..|.++|+++| |+|.|+++.+..-... ...... ...+. + .
T Consensus 5 ~~~il~v~~E~~----p-----~~k~Ggl~dv~~~Lp~al~~~g--~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~ 73 (489)
T PRK14098 5 NFKVLYVSGEVS----P-----FVRVSALADFMASFPQALEEEG--FEARIMMPKYGTINDRKFRLHDVLRLSDIEVPLK 73 (489)
T ss_pred CcEEEEEeecch----h-----hcccchHHHHHHHHHHHHHHCC--CeEEEEcCCCCchhhhhhccccceEEEEEEEeec
Confidence 489999995553 1 2689999999999999999999 9999999976431100 000000 00000 0 0
Q ss_pred CCCccccc-CC--CCCCeEEEecCCCCCCcccccccCC-------CChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcE
Q 002660 78 NSDDFMDD-MG--ESSGAYIIRIPFGPKDKYIAKELLW-------PHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVA 147 (895)
Q Consensus 78 ~~~~~~~~-~~--~~~gv~i~~i~~~~~~~~~~~~~~~-------~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDv 147 (895)
........ .. ...++.++.+... .++.+..+. +|.+.+.+ +..+-......+.+ ..++|||
T Consensus 74 ~~~~~~~~~~~~~~~~~v~~~~~~~~---~~f~r~~~y~~~~~g~~~~d~~~r-f~~f~~a~l~~~~~-----~~~~pDi 144 (489)
T PRK14098 74 EKTDLLHVKVTALPSSKIQTYFLYNE---KYFKRNGLFTDMSLGGDLKGSAEK-VIFFNVGVLETLQR-----LGWKPDI 144 (489)
T ss_pred CeeEEEEEEEecccCCCceEEEEeCH---HHcCCCCcCCCCccCCCCCcHHHH-HHHHHHHHHHHHHh-----cCCCCCE
Confidence 00000000 00 0113444443321 122222111 11111111 11111111111111 1267999
Q ss_pred EEeccccchhHHHHHhccC-------CCCEEEEeCCCchhhHHH--HHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCE
Q 002660 148 IHGHYADAGDSAALLSGAL-------NVPMLFTGHSLGRDKLEQ--LLKQARLSRDEINATYKIMRRIEAEELSLDASEI 218 (895)
Q Consensus 148 Vh~h~~~~~~~~~~~~~~~-------~ip~v~t~H~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~ 218 (895)
||+|+|.+++++.++++.. ++|+|+|+|++..+.... .+.. .++.............+..++.++..||.
T Consensus 145 iH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~-~~~~~~~~~~~~~~~~~n~lk~~i~~ad~ 223 (489)
T PRK14098 145 IHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQK-LLPEEVCSGLHREGDEVNMLYTGVEHADL 223 (489)
T ss_pred EEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHH-hCCHHhhhhhhhcCCcccHHHHHHHhcCc
Confidence 9999999999888886543 799999999975432100 0000 01111111111111123335668999999
Q ss_pred EEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CC
Q 002660 219 VITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPAS-PD 297 (895)
Q Consensus 219 vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~-~~ 297 (895)
|+++|+...+++.... .+.-.+...|+.+ ..++.+||||||++.|.|..... ..+.+...... ..
T Consensus 224 VitVS~~~a~ei~~~~-~~~~gl~~~l~~~-----------~~kl~~I~NGID~~~~~p~~d~~--~~~~~~~~~~~~k~ 289 (489)
T PRK14098 224 LTTTSPRYAEEIAGDG-EEAFGLDKVLEER-----------KMRLHGILNGIDTRQWNPSTDKL--IKKRYSIERLDGKL 289 (489)
T ss_pred ceeeCHHHHHHhCcCC-CCCcChHHHHHhc-----------CCCeeEEeCCccccccCCccccc--ccccCCcchhhhHH
Confidence 9999998888764310 0000112222211 23899999999999998754211 00001000000 00
Q ss_pred CchhHHhhhhcCC--CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHH
Q 002660 298 PPIWSEIMRFFTN--PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLI 375 (895)
Q Consensus 298 ~~~~~~~~~~~~~--~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~ 375 (895)
......+++++.+ ++.++|+++||+.+.||++.+++|+..+.+ ....+ +|+|+|+. .+..++.+++
T Consensus 290 ~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~--~~~~l-vivG~G~~---------~~~~~l~~l~ 357 (489)
T PRK14098 290 ENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVE--LDIQL-VICGSGDK---------EYEKRFQDFA 357 (489)
T ss_pred HHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHh--cCcEE-EEEeCCCH---------HHHHHHHHHH
Confidence 0112233445544 467899999999999999999999999863 23333 47788752 2346677777
Q ss_pred HhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhcccc----CCCeE
Q 002660 376 DKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV----LDNGL 451 (895)
Q Consensus 376 ~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~----~~~g~ 451 (895)
++++ ++|.|.+.++.+++..+|+.| |++|+||..|+||++.+|||+||+|+|+++.||..|.+.+ +.+|+
T Consensus 358 ~~~~--~~V~~~g~~~~~~~~~~~a~a----Di~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~ 431 (489)
T PRK14098 358 EEHP--EQVSVQTEFTDAFFHLAIAGL----DMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGF 431 (489)
T ss_pred HHCC--CCEEEEEecCHHHHHHHHHhC----CEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCcee
Confidence 7763 689999999888899999999 9999999999999999999999999999999999998864 67999
Q ss_pred EeCCCCHHHHHHHHHHHH---hCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccC
Q 002660 452 LVDPHDQQSVADALLKLV---ADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKP 507 (895)
Q Consensus 452 lv~p~d~~~la~ai~~ll---~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~~~ 507 (895)
++++.|+++++++|.+++ ++++.++++++++++ +.|||+..+++|+++|+++++
T Consensus 432 l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~y~~lY~~~~~ 488 (489)
T PRK14098 432 IFHDYTPEALVAKLGEALALYHDEERWEELVLEAME--RDFSWKNSAEEYAQLYRELLG 488 (489)
T ss_pred EeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--CCCChHHHHHHHHHHHHHHhc
Confidence 999999999999999875 588888887766532 699999999999999998753
No 21
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=6.7e-36 Score=336.65 Aligned_cols=366 Identities=21% Similarity=0.291 Sum_probs=265.6
Q ss_pred eeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCccc
Q 002660 4 NNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 83 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~ 83 (895)
|||++++ + |..||.++++.+|+++|+++| |+|+|+|..... .. ..
T Consensus 1 mki~~~~---~-----------p~~gG~~~~~~~la~~L~~~G--~~v~v~~~~~~~-~~------~~------------ 45 (371)
T cd04962 1 MKIGIVC---Y-----------PTYGGSGVVATELGKALARRG--HEVHFITSSRPF-RL------DE------------ 45 (371)
T ss_pred CceeEEE---E-----------eCCCCccchHHHHHHHHHhcC--CceEEEecCCCc-ch------hh------------
Confidence 7999997 2 567999999999999999999 999999874210 00 00
Q ss_pred ccCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHh
Q 002660 84 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLS 163 (895)
Q Consensus 84 ~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~ 163 (895)
..+++.+..++.... +......+.......+.+. +.+ .+||+||+|++........++
T Consensus 46 ----~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~-------i~~-------~~~divh~~~~~~~~~~~~~~ 103 (371)
T cd04962 46 ----YSPNIFFHEVEVPQY----PLFQYPPYDLALASKIAEV-------AKR-------YKLDLLHVHYAVPHAVAAYLA 103 (371)
T ss_pred ----hccCeEEEEeccccc----chhhcchhHHHHHHHHHHH-------Hhc-------CCccEEeecccCCccHHHHHH
Confidence 012444444332211 0000001111111112221 222 689999999864333222222
Q ss_pred ----ccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCCh
Q 002660 164 ----GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDP 239 (895)
Q Consensus 164 ----~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~ 239 (895)
+..++|+|++.|+...... +. .. ..+. .++..++.+|.|++.|+...+.+.+.+.
T Consensus 104 ~~~~~~~~~~~i~~~h~~~~~~~------~~------~~---~~~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~~---- 162 (371)
T cd04962 104 REILGKKDLPVVTTLHGTDITLV------GQ------DP---SFQP--ATRFSIEKSDGVTAVSESLRQETYELFD---- 162 (371)
T ss_pred HHhcCcCCCcEEEEEcCCccccc------cc------cc---cchH--HHHHHHhhCCEEEEcCHHHHHHHHHhcC----
Confidence 2248999999997633210 00 00 1111 1445788999999999987776654431
Q ss_pred HHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEE
Q 002660 240 VLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILAL 319 (895)
Q Consensus 240 ~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~v 319 (895)
+..++.+||||+|...|.+.... ..+.+++..+++++++++
T Consensus 163 -------------------~~~~i~vi~n~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~il~~ 203 (371)
T cd04962 163 -------------------ITKEIEVIPNFVDEDRFRPKPDE--------------------ALKRRLGAPEGEKVLIHI 203 (371)
T ss_pred -------------------CcCCEEEecCCcCHhhcCCCchH--------------------HHHHhcCCCCCCeEEEEe
Confidence 11289999999998777543210 122344455678899999
Q ss_pred eCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHH
Q 002660 320 ARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIY 399 (895)
Q Consensus 320 grl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly 399 (895)
||+.+.||++.+++|+..+.+. ....+ +++|.+++ ...+...+.++++.++|.|+|. .+++..+|
T Consensus 204 g~l~~~K~~~~li~a~~~l~~~-~~~~l-~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~ 268 (371)
T cd04962 204 SNFRPVKRIDDVIRIFAKVRKE-VPARL-LLVGDGPE-----------RSPAERLARELGLQDDVLFLGK--QDHVEELL 268 (371)
T ss_pred cccccccCHHHHHHHHHHHHhc-CCceE-EEEcCCcC-----------HHHHHHHHHHcCCCceEEEecC--cccHHHHH
Confidence 9999999999999999988532 22333 47788764 2456677788888889999997 46899999
Q ss_pred HHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHH
Q 002660 400 RLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCR 479 (895)
Q Consensus 400 ~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~ 479 (895)
+.| |++|+||..|+||++++|||+||+|||+++.|+..|++.++.+|++++++|+++++++|.+++++++.+.+++
T Consensus 269 ~~~----d~~v~ps~~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~~~~~~~~~ 344 (371)
T cd04962 269 SIA----DLFLLPSEKESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLEDDELWQEFS 344 (371)
T ss_pred Hhc----CEEEeCCCcCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHHhCHHHHHHHH
Confidence 999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHh-hcCCHHHHHHHHHHHHHcc
Q 002660 480 QNGLKNI-HLFSWPEHCKTYLSRIAGC 505 (895)
Q Consensus 480 ~~~~~~~-~~~s~~~~a~~~~~~~~~~ 505 (895)
.++++.+ ++|||+.+++++.++|+++
T Consensus 345 ~~~~~~~~~~fs~~~~~~~~~~~y~~~ 371 (371)
T cd04962 345 RAARNRAAERFDSERIVPQYEALYRRL 371 (371)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 9999997 6999999999999999864
No 22
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=100.00 E-value=1.5e-35 Score=335.39 Aligned_cols=279 Identities=20% Similarity=0.264 Sum_probs=226.3
Q ss_pred CCCcEEEeccccchhHHHHHhc--cCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEE
Q 002660 143 VWPVAIHGHYADAGDSAALLSG--ALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVI 220 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~~--~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi 220 (895)
.+||+||+|++..+..+..+++ ..+.|.++|.|+...... ... ..++. ..+..++.+|.|+
T Consensus 117 ~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~-~~~-----------~~~~~-----~~~~~~~~ad~vv 179 (406)
T PRK15427 117 FVADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSR-EVL-----------NHYTP-----EYQQLFRRGDLML 179 (406)
T ss_pred CCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccc-hhh-----------hhhhH-----HHHHHHHhCCEEE
Confidence 6799999999877777777765 445678999997643210 000 00100 1233578999999
Q ss_pred eCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCch
Q 002660 221 TSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPI 300 (895)
Q Consensus 221 ~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (895)
++|+...+.+... ..++ +++.+||||+|.+.|.+.....
T Consensus 180 ~~S~~~~~~l~~~--g~~~---------------------~ki~vi~nGvd~~~f~~~~~~~------------------ 218 (406)
T PRK15427 180 PISDLWAGRLQKM--GCPP---------------------EKIAVSRMGVDMTRFSPRPVKA------------------ 218 (406)
T ss_pred ECCHHHHHHHHHc--CCCH---------------------HHEEEcCCCCCHHHcCCCcccc------------------
Confidence 9999776665332 1222 3899999999999886532110
Q ss_pred hHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcC
Q 002660 301 WSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYD 379 (895)
Q Consensus 301 ~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~ 379 (895)
..+...|+++||+.+.||++.+++|++.+.+. .+++.+ ++|+|+. ..++.+++++++
T Consensus 219 ---------~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~--~~~~~l~ivG~G~~-----------~~~l~~~~~~~~ 276 (406)
T PRK15427 219 ---------PATPLEIISVARLTEKKGLHVAIEACRQLKEQ--GVAFRYRILGIGPW-----------ERRLRTLIEQYQ 276 (406)
T ss_pred ---------CCCCeEEEEEeCcchhcCHHHHHHHHHHHHhh--CCCEEEEEEECchh-----------HHHHHHHHHHcC
Confidence 13456799999999999999999999998643 345554 7898863 366778899999
Q ss_pred CCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCC------CCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEe
Q 002660 380 LYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFI------EPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLV 453 (895)
Q Consensus 380 l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~------Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv 453 (895)
+.++|.|+|+++.+++.++|+.| |++|+||.. ||+|++++||||||+|||+|+.||..|++.++.+|+++
T Consensus 277 l~~~V~~~G~~~~~el~~~l~~a----Dv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv 352 (406)
T PRK15427 277 LEDVVEMPGFKPSHEVKAMLDDA----DVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLV 352 (406)
T ss_pred CCCeEEEeCCCCHHHHHHHHHhC----CEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEe
Confidence 99999999999999999999999 999999974 99999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHHcc
Q 002660 454 DPHDQQSVADALLKLVA-DKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAGC 505 (895)
Q Consensus 454 ~p~d~~~la~ai~~ll~-~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~~~ 505 (895)
+|+|+++++++|.++++ +++.++++++++++.+ ++|||+..++++.++|+++
T Consensus 353 ~~~d~~~la~ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~~ 406 (406)
T PRK15427 353 PENDAQALAQRLAAFSQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQAL 406 (406)
T ss_pred CCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 99999999999999999 9999999999999999 6999999999999999753
No 23
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=5.8e-35 Score=329.58 Aligned_cols=357 Identities=20% Similarity=0.229 Sum_probs=260.8
Q ss_pred CCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCccc
Q 002660 27 DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYI 106 (895)
Q Consensus 27 ~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~~~ 106 (895)
+.||+++++.+|+++|.++| +++.|++....+ . +.... ...|+++++++..+..
T Consensus 12 ~~GG~e~~~~~l~~~l~~~~--~~~~v~~~~~~~-~----~~~~~----------------~~~~i~~~~~~~~~~~--- 65 (374)
T TIGR03088 12 DVGGLENGLVNLINHLPADR--YRHAVVALTEVS-A----FRKRI----------------QRPDVAFYALHKQPGK--- 65 (374)
T ss_pred CCCcHHHHHHHHHhhccccc--cceEEEEcCCCC-h----hHHHH----------------HhcCceEEEeCCCCCC---
Confidence 46899999999999999998 999998753211 1 11000 0137788877643220
Q ss_pred ccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhccCCCCE-EEEeCCCchhhHHHH
Q 002660 107 AKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPM-LFTGHSLGRDKLEQL 185 (895)
Q Consensus 107 ~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~~~~ip~-v~t~H~~~~~~~~~~ 185 (895)
. + .+...+.+.+.+ .+|||||+|... ...+..+++..++|. +++.|+.......
T Consensus 66 ----~---~-~~~~~l~~~l~~--------------~~~Divh~~~~~-~~~~~~~~~~~~~~~~i~~~h~~~~~~~~-- 120 (374)
T TIGR03088 66 ----D---V-AVYPQLYRLLRQ--------------LRPDIVHTRNLA-ALEAQLPAALAGVPARIHGEHGRDVFDLD-- 120 (374)
T ss_pred ----C---h-HHHHHHHHHHHH--------------hCCCEEEEcchh-HHHHHHHHHhcCCCeEEEeecCcccccch--
Confidence 0 1 122223333333 689999999763 333445555667775 5566654221100
Q ss_pred HHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEE
Q 002660 186 LKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAI 265 (895)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~v 265 (895)
+ ....+.+. ++...+.+|.++++|+...+.+...+. .+..++.+
T Consensus 121 ---~------~~~~~~~~-----~~~~~~~~~~~i~vs~~~~~~~~~~~~----------------------~~~~~~~v 164 (374)
T TIGR03088 121 ---G------SNWKYRWL-----RRLYRPLIHHYVAVSRDLEDWLRGPVK----------------------VPPAKIHQ 164 (374)
T ss_pred ---h------hHHHHHHH-----HHHHHhcCCeEEEeCHHHHHHHHHhcC----------------------CChhhEEE
Confidence 0 00011122 233556789999999977766544332 22238999
Q ss_pred eCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCC-
Q 002660 266 IPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLREL- 344 (895)
Q Consensus 266 ip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~- 344 (895)
||||+|.+.|.+..... ...........++++|+++||+.+.||++.+++|+..+.+..+.
T Consensus 165 i~ngvd~~~~~~~~~~~------------------~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~ 226 (374)
T TIGR03088 165 IYNGVDTERFHPSRGDR------------------SPILPPDFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEG 226 (374)
T ss_pred eccCccccccCCCccch------------------hhhhHhhcCCCCCeEEEEEecCCcccCHHHHHHHHHHHHHhCccc
Confidence 99999998886532110 01111222345678999999999999999999999988654332
Q ss_pred -CcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHH
Q 002660 345 -ANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTL 422 (895)
Q Consensus 345 -~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~ 422 (895)
+++.+ ++|+|+. ..++...++.+++..++.|+|. .+++..+|+.| |++|+||..||||+++
T Consensus 227 ~~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a----di~v~pS~~Eg~~~~~ 289 (374)
T TIGR03088 227 AERLRLVIVGDGPA-----------RGACEQMVRAAGLAHLVWLPGE--RDDVPALMQAL----DLFVLPSLAEGISNTI 289 (374)
T ss_pred ccceEEEEecCCch-----------HHHHHHHHHHcCCcceEEEcCC--cCCHHHHHHhc----CEEEeccccccCchHH
Confidence 25554 7788763 2556677888899889999996 67999999999 9999999999999999
Q ss_pred HHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHH
Q 002660 423 IEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSR 501 (895)
Q Consensus 423 ~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~ 501 (895)
+|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++++++.+..++.++++.+ ++|||+.++++|.++
T Consensus 290 lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~ 369 (374)
T TIGR03088 290 LEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSDPAARRAHGAAGRARAEQQFSINAMVAAYAGL 369 (374)
T ss_pred HHHHHcCCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999998 699999999999999
Q ss_pred HHcc
Q 002660 502 IAGC 505 (895)
Q Consensus 502 ~~~~ 505 (895)
|+++
T Consensus 370 y~~~ 373 (374)
T TIGR03088 370 YDQL 373 (374)
T ss_pred HHHh
Confidence 9876
No 24
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=100.00 E-value=2.2e-35 Score=343.73 Aligned_cols=442 Identities=19% Similarity=0.150 Sum_probs=277.9
Q ss_pred eEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCC-CCCCCccccc---CCCCCC
Q 002660 5 NYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVD-WSYGEPTEML---TPRNSD 80 (895)
Q Consensus 5 ~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~-~~y~~~~e~~---~~~~~~ 80 (895)
||+|+|.-. +...-+||...++..|+++|+++| |+|+|+++.+..-... .......... ......
T Consensus 1 ~Il~v~~E~---------~p~~k~GGl~~~~~~L~~aL~~~G--~~V~Vi~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (476)
T cd03791 1 KVLFVASEV---------APFAKTGGLGDVVGALPKALAKLG--HDVRVIMPKYGRILDELRGQLLVLRLFGVPVGGRPE 69 (476)
T ss_pred CEEEEEccc---------cccccCCcHHHHHHHHHHHHHHCC--CeEEEEecCCcchhhHhccCeEEEEEEeeccCCcee
Confidence 689998443 322469999999999999999999 9999999876431110 0000000000 000000
Q ss_pred cccccCCCCCCeEEEecCCCCCC--cccccccCCCCh---HHH---HHHHHHHHHHhhhhhhcccCCCCCCCCcEEEecc
Q 002660 81 DFMDDMGESSGAYIIRIPFGPKD--KYIAKELLWPHI---PEF---VDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHY 152 (895)
Q Consensus 81 ~~~~~~~~~~gv~i~~i~~~~~~--~~~~~~~~~~~l---~~f---~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~ 152 (895)
...-.....+|+.++++...... ..+.......+. .+| ...++..+.. + ..+|||||+|.
T Consensus 70 ~~~~~~~~~~gv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~----~--------~~~pDviH~hd 137 (476)
T cd03791 70 YVGVFELPVDGVPVYFLDNPDYFDRPGLYDDSGYDYEDNAERFALFSRAALELLRR----L--------GWKPDIIHCHD 137 (476)
T ss_pred EEEEEEEEeCCceEEEEcChHHcCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHh----c--------CCCCcEEEECc
Confidence 00000111357888887653210 000000011111 111 1122222211 1 26799999999
Q ss_pred ccchhHHHHHhcc------CCCCEEEEeCCCchhhHHH---HHHHhhcc-HHHHHhhhhhhHHHHHHHhhhcccCEEEeC
Q 002660 153 ADAGDSAALLSGA------LNVPMLFTGHSLGRDKLEQ---LLKQARLS-RDEINATYKIMRRIEAEELSLDASEIVITS 222 (895)
Q Consensus 153 ~~~~~~~~~~~~~------~~ip~v~t~H~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~ 222 (895)
|.+++++..+... .++|+|+|+|++....... +...+... .......+.+...+..++.++..||.|+++
T Consensus 138 ~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~v 217 (476)
T cd03791 138 WHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTV 217 (476)
T ss_pred hHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeec
Confidence 9888888777765 3899999999986533110 00000000 000000001112233467789999999999
Q ss_pred ChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCchh
Q 002660 223 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPA-SPDPPIW 301 (895)
Q Consensus 223 s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~-~~~~~~~ 301 (895)
|+...++....+... .+...+ ..+..++.+||||||.+.|.|........ .+..... .......
T Consensus 218 S~~~~~~i~~~~~~~--gl~~~~-----------~~~~~ki~~I~NGid~~~~~p~~~~~~~~--~~~~~~~~~~~~~k~ 282 (476)
T cd03791 218 SPTYAREILTPEFGE--GLDGLL-----------RARAGKLSGILNGIDYDVWNPATDPHLPA--NYSADDLEGKAENKA 282 (476)
T ss_pred CHhHHHHhCCCCCCc--chHHHH-----------HhccCCeEEEeCCCcCcccCccccchhhh--cCCccccccHHHHHH
Confidence 998777654321100 000000 11224899999999999998754221000 0000000 0011112
Q ss_pred HHhhhhcC--CCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcC
Q 002660 302 SEIMRFFT--NPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYD 379 (895)
Q Consensus 302 ~~~~~~~~--~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~ 379 (895)
..+++++. .++.++|+++||+.+.||++.+++|+..+.+ ...++ +++|+++. .+...+..+..++
T Consensus 283 ~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~~l-vi~G~g~~---------~~~~~~~~~~~~~- 349 (476)
T cd03791 283 ALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLE--LGGQL-VILGSGDP---------EYEEALRELAARY- 349 (476)
T ss_pred HHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHH--cCcEE-EEEecCCH---------HHHHHHHHHHHhC-
Confidence 23444554 3678999999999999999999999999863 22333 47787742 2345555666655
Q ss_pred CCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCC------CeEEe
Q 002660 380 LYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLD------NGLLV 453 (895)
Q Consensus 380 l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~------~g~lv 453 (895)
.+++.|.+..+.+++..+|+.| |++|+||.+|+||++++|||+||+|||+++.||..|++.++. +|+++
T Consensus 350 -~~~v~~~~~~~~~~~~~~~~~a----Dv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~ 424 (476)
T cd03791 350 -PGRVAVLIGYDEALAHLIYAGA----DFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVF 424 (476)
T ss_pred -CCcEEEEEeCCHHHHHHHHHhC----CEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEe
Confidence 4677776666666778999999 999999999999999999999999999999999999999887 99999
Q ss_pred CCCCHHHHHHHHHHHHh---CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHc
Q 002660 454 DPHDQQSVADALLKLVA---DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAG 504 (895)
Q Consensus 454 ~p~d~~~la~ai~~ll~---~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~ 504 (895)
+|.|+++++++|.++++ +++.++++++++++ ..|||+.++++|+++|++
T Consensus 425 ~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~~y~~ 476 (476)
T cd03791 425 EGYNADALLAALRRALALYRDPEAWRKLQRNAMA--QDFSWDRSAKEYLELYRS 476 (476)
T ss_pred CCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--cCCChHHHHHHHHHHHhC
Confidence 99999999999999886 66777777776654 479999999999999863
No 25
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=100.00 E-value=1.6e-34 Score=325.07 Aligned_cols=373 Identities=17% Similarity=0.210 Sum_probs=265.5
Q ss_pred CcceeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCC
Q 002660 1 MIFNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSD 80 (895)
Q Consensus 1 ~~~m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~ 80 (895)
|+- ||+|++.--+ + .+ +.-.||+|+++.++++.|+ ++|+|+|..... |...+ .
T Consensus 1 ~~~-~~~~~~~~~~----~--~p-~~~~g~ve~~~~~~~~~l~-----~~~~~~~~~~~~------~~~~~-~------- 53 (380)
T PRK15484 1 MID-KIIFTVTPIF----S--IP-PRGAAAVETWIYQVAKRTS-----IPNRIACIKNPG------YPEYT-K------- 53 (380)
T ss_pred CCc-eEEEEeccCC----C--CC-CccccHHHHHHHHhhhhcc-----CCeeEEEecCCC------CCchh-h-------
Confidence 774 9999885554 2 22 2347999999999999993 589999986421 11110 0
Q ss_pred cccccCCCCCCeEEEecCCCCCCcccccccCCCCh--HHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhH
Q 002660 81 DFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHI--PEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDS 158 (895)
Q Consensus 81 ~~~~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l--~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~ 158 (895)
..+|+.++++++... +......|..+ ..+...++..+... ...++||||+|... .+.
T Consensus 54 -------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~vi~v~~~~-~~~ 112 (380)
T PRK15484 54 -------VNDNCDIHYIGFSRI--YKRLFQKWTRLDPLPYSQRILNIAHKF-----------TITKDSVIVIHNSM-KLY 112 (380)
T ss_pred -------ccCCCceEEEEeccc--cchhhhhhhccCchhHHHHHHHHHHhc-----------CCCCCcEEEEeCcH-HhH
Confidence 124677777755321 11100111111 12223232222110 12569999999853 333
Q ss_pred HHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCC
Q 002660 159 AALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFD 238 (895)
Q Consensus 159 ~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~ 238 (895)
.....+..+.|+|++.|+.+... .+..++.|+++|+...+.+...++
T Consensus 113 ~~~~~~~~~~~~v~~~h~~~~~~------------------------------~~~~~~~ii~~S~~~~~~~~~~~~--- 159 (380)
T PRK15484 113 RQIRERAPQAKLVMHMHNAFEPE------------------------------LLDKNAKIIVPSQFLKKFYEERLP--- 159 (380)
T ss_pred HHHHhhCCCCCEEEEEecccChh------------------------------HhccCCEEEEcCHHHHHHHHhhCC---
Confidence 44445556789999999753211 234678999999877665433221
Q ss_pred hHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEE
Q 002660 239 PVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILA 318 (895)
Q Consensus 239 ~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~ 318 (895)
..++.+||||+|.+.|.+... .....+++..+++++|+|
T Consensus 160 ---------------------~~~i~vIpngvd~~~~~~~~~--------------------~~~~~~~~~~~~~~~il~ 198 (380)
T PRK15484 160 ---------------------NADISIVPNGFCLETYQSNPQ--------------------PNLRQQLNISPDETVLLY 198 (380)
T ss_pred ---------------------CCCEEEecCCCCHHHcCCcch--------------------HHHHHHhCCCCCCeEEEE
Confidence 127999999999888764320 012234445567789999
Q ss_pred EeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHH
Q 002660 319 LARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPE 397 (895)
Q Consensus 319 vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ 397 (895)
+||+.+.||++.+++|+..+.+. .+++.+ ++|+++.... .+...+..++.+++..++ .++.|.|+++.+++..
T Consensus 199 ~Grl~~~Kg~~~Li~A~~~l~~~--~p~~~lvivG~g~~~~~--~~~~~~~~~l~~~~~~l~--~~v~~~G~~~~~~l~~ 272 (380)
T PRK15484 199 AGRISPDKGILLLMQAFEKLATA--HSNLKLVVVGDPTASSK--GEKAAYQKKVLEAAKRIG--DRCIMLGGQPPEKMHN 272 (380)
T ss_pred eccCccccCHHHHHHHHHHHHHh--CCCeEEEEEeCCccccc--cchhHHHHHHHHHHHhcC--CcEEEeCCCCHHHHHH
Confidence 99999999999999999998643 345554 7787754211 122345667777777665 5799999999999999
Q ss_pred HHHHhhcCCcEEEecCC-CCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeE-EeCCCCHHHHHHHHHHHHhCHHHH
Q 002660 398 IYRLAAKTKGVFINPAF-IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGL-LVDPHDQQSVADALLKLVADKQLW 475 (895)
Q Consensus 398 ly~~A~~~~dv~v~ps~-~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~-lv~p~d~~~la~ai~~ll~~~~~~ 475 (895)
+|+.| |++|+||. .|+||++++||||||+|||+|+.||..|++.++.+|+ +++|.|+++++++|.++++|++.
T Consensus 273 ~~~~a----Dv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d~~~- 347 (380)
T PRK15484 273 YYPLA----DLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLADPEL- 347 (380)
T ss_pred HHHhC----CEEEeCCCCccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcCHHH-
Confidence 99999 99999997 5999999999999999999999999999999999998 56899999999999999999985
Q ss_pred HHHHHHHHHHh-hcCCHHHHHHHHHHHHHccc
Q 002660 476 ARCRQNGLKNI-HLFSWPEHCKTYLSRIAGCK 506 (895)
Q Consensus 476 ~~~~~~~~~~~-~~~s~~~~a~~~~~~~~~~~ 506 (895)
.++++++++.+ ++|||+.++++|++.|++..
T Consensus 348 ~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~~~ 379 (380)
T PRK15484 348 TQIAEQAKDFVFSKYSWEGVTQRFEEQIHNWF 379 (380)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhc
Confidence 77999999988 69999999999999998653
No 26
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=100.00 E-value=1.1e-34 Score=329.60 Aligned_cols=379 Identities=18% Similarity=0.172 Sum_probs=250.1
Q ss_pred HHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCcccccccCCCC
Q 002660 35 VVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPH 114 (895)
Q Consensus 35 v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~ 114 (895)
..+||++|+++| |+|+++|..... .. ..|+++++++..+.. .+ ..+++
T Consensus 13 ~~~la~~L~~~G--~~v~~~~~~~~~-~~-------------------------~~~v~~~~~~~~~~~---~~-~~~~~ 60 (396)
T cd03818 13 FRHLAPALAAQG--HEVVFLTEPNAA-PP-------------------------PGGVRVVRYRPPRGP---TS-GTHPY 60 (396)
T ss_pred HHHHHHHHHHCC--CEEEEEecCCCC-CC-------------------------CCCeeEEEecCCCCC---CC-CCCcc
Confidence 457999999999 999999986321 10 016889988865431 11 35566
Q ss_pred hHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhcc-CCCCEEEEeCCCchhhHHHHHHHhhccH
Q 002660 115 IPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGA-LNVPMLFTGHSLGRDKLEQLLKQARLSR 193 (895)
Q Consensus 115 l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~~-~~ip~v~t~H~~~~~~~~~~~~~~~~~~ 193 (895)
...+...+.+.... .+.+.... .++.+|||||+|.... .+..+.+. .++|+|.+.|-+................
T Consensus 61 ~~~~~~~~~~~~~~-~~~~~~~~--~~~~~pdvi~~h~~~~--~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 135 (396)
T cd03818 61 LREFEEAVLRGQAV-ARALLALR--AKGFRPDVIVAHPGWG--ETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPP 135 (396)
T ss_pred chhHHHHHHHHHHH-HHHHHHHH--hcCCCCCEEEECCccc--hhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCC
Confidence 66665544332111 11111110 1247899999997422 12223333 3688887665322110000000000000
Q ss_pred HHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCC
Q 002660 194 DEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFH 273 (895)
Q Consensus 194 ~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~ 273 (895)
.. ....++..+.......++.+|.||++|+...+.+...+. .++.+||||+|.+
T Consensus 136 ~~-~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~-------------------------~ki~vI~ngvd~~ 189 (396)
T cd03818 136 SL-DDALRLRNRNALILLALAQADAGVSPTRWQRSTFPAELR-------------------------SRISVIHDGIDTD 189 (396)
T ss_pred ch-hHHHHHHHhhhHhHHHHHhCCEEECCCHHHHhhCcHhhc-------------------------cceEEeCCCcccc
Confidence 00 000111111111345789999999999877665433221 2899999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeC-CCCCCCHHHHHHHHHhcccccCCCcEEEEEe
Q 002660 274 HIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALAR-PDPKKNITTLVKAFGECRPLRELANLTLIMG 352 (895)
Q Consensus 274 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgr-l~~~Kgi~~ll~A~~~l~~~~~~~~l~livG 352 (895)
.|.+....... ........++.++|+|+|| +.+.||++.+++|+..+.+..++..+ +++|
T Consensus 190 ~f~~~~~~~~~------------------~~~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~l-vivG 250 (396)
T cd03818 190 RLRPDPQARLR------------------LPNGRVLTPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDARV-VIVG 250 (396)
T ss_pred ccCCCchhhhc------------------ccccccCCCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcEE-EEEc
Confidence 99764311100 0001112356789999998 99999999999999998644444444 3667
Q ss_pred cCC-CccccccchHHHHHHHHHHHH-hcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCC
Q 002660 353 NRD-GIDEMSSTSASVLLSVLKLID-KYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGL 430 (895)
Q Consensus 353 ~~~-~~~~~~~~~~~~~~~l~~~~~-~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~ 430 (895)
++. .+.......+++..++.+... +++ .++|.|+|+++.+++..+|+.| |++|+||..|++|++++||||||+
T Consensus 251 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~V~f~G~v~~~~~~~~l~~a----dv~v~~s~~e~~~~~llEAmA~G~ 325 (396)
T cd03818 251 GDGVSYGAPPPDGESWKQHMLDELGGRLD-LSRVHFLGRVPYDQYLALLQVS----DVHVYLTYPFVLSWSLLEAMACGC 325 (396)
T ss_pred CCCcccCCCCCCcccHHHHHHHHhhcccC-cceEEEeCCCCHHHHHHHHHhC----cEEEEcCcccccchHHHHHHHCCC
Confidence 532 221111111112233322222 222 4689999999999999999999 999999999999999999999999
Q ss_pred CEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhh-cCCHHHHHHHHHH
Q 002660 431 PIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIH-LFSWPEHCKTYLS 500 (895)
Q Consensus 431 PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~-~~s~~~~a~~~~~ 500 (895)
|||+|+.||..|++.++.+|+++++.|+++++++|.+++++++.++++++++++.++ +|||+.++++|++
T Consensus 326 PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~l~~~ar~~~~~~fs~~~~~~~~~~ 396 (396)
T cd03818 326 LVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELLDDPARRARLRRAARRTALRYDLLSVCLPRQLA 396 (396)
T ss_pred CEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhccHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999994 7999999998863
No 27
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=100.00 E-value=2.2e-34 Score=326.97 Aligned_cols=387 Identities=19% Similarity=0.200 Sum_probs=263.2
Q ss_pred eeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCccc
Q 002660 4 NNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 83 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~ 83 (895)
|||+++.+.. ..||.++++.+||++|+++| |+|+|+|..... . ..+. +..
T Consensus 1 mkIl~~~~~~-------------~~gG~e~~~~~la~~L~~~G--~~V~v~~~~~~~--~-~~~~---~~~--------- 50 (392)
T cd03805 1 LRVAFIHPDL-------------GIGGAERLVVDAALALQSRG--HEVTIYTSHHDP--S-HCFE---ETK--------- 50 (392)
T ss_pred CeEEEECCCC-------------CCchHHHHHHHHHHHHHhCC--CeEEEEcCCCCc--h-hcch---hcc---------
Confidence 7999996332 36899999999999999999 999999974211 0 0000 000
Q ss_pred ccCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHh
Q 002660 84 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLS 163 (895)
Q Consensus 84 ~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~ 163 (895)
..++.+..++. +++.. .+.....+... +......... .+ ....+||+||+|....+.......
T Consensus 51 -----~~~~~i~~~~~-----~~~~~-~~~~~~~~~~~-~~~~~~~~~~---~~--~~~~~~Dvi~~~~~~~~~~~~~~~ 113 (392)
T cd03805 51 -----DGTLPVRVRGD-----WLPRS-IFGRFHILCAY-LRMLYLALYL---LL--LPDEKYDVFIVDQVSACVPLLKLF 113 (392)
T ss_pred -----CCeeEEEEEeE-----EEcch-hhHhHHHHHHH-HHHHHHHHHH---Hh--cccCCCCEEEEcCcchHHHHHHHh
Confidence 11244433321 11110 11111111110 0110000000 00 012679999999764433322222
Q ss_pred ccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhh-hhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHH
Q 002660 164 GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYK-IMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 242 (895)
Q Consensus 164 ~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~ 242 (895)
.+.|+|++.|... .. ... ........++ ...+ .|+..++.+|.|+++|+...+.+...++....
T Consensus 114 --~~~~~i~~~h~~~--~~---~~~---~~~~~~~~~~~~~~~--~e~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~--- 178 (392)
T cd03805 114 --SPSKILFYCHFPD--QL---LAQ---RGSLLKRLYRKPFDW--LEEFTTGMADKIVVNSNFTASVFKKTFPSLAK--- 178 (392)
T ss_pred --cCCcEEEEEecCh--HH---hcC---CCcHHHHHHHHHHHH--HHHHHhhCceEEEEcChhHHHHHHHHhccccc---
Confidence 2389999999432 11 100 0001111121 2233 37788999999999999877766555433211
Q ss_pred HHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCC
Q 002660 243 RKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARP 322 (895)
Q Consensus 243 ~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl 322 (895)
.++.+||||+|.+.|.+..... ........++.++|+++||+
T Consensus 179 ------------------~~~~vi~n~vd~~~~~~~~~~~--------------------~~~~~~~~~~~~~i~~~grl 220 (392)
T cd03805 179 ------------------NPREVVYPCVDTDSFESTSEDP--------------------DPGLLIPKSGKKTFLSINRF 220 (392)
T ss_pred ------------------CCcceeCCCcCHHHcCcccccc--------------------cccccccCCCceEEEEEeee
Confidence 1346999999998886533110 01112234677899999999
Q ss_pred CCCCCHHHHHHHHHhcccccC-CCcEEE-EEecCCCccccccchHHHHHHHHHHHHh-cCCCCcEEeCCCCCCCCHHHHH
Q 002660 323 DPKKNITTLVKAFGECRPLRE-LANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDK-YDLYGQVAYPKHHKQSDVPEIY 399 (895)
Q Consensus 323 ~~~Kgi~~ll~A~~~l~~~~~-~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~-~~l~~~v~~~g~~~~~el~~ly 399 (895)
.+.||++.+++|++++.+..+ .+++.+ ++|+++... ....++.+++..++++ +++.++|.|+|+++.+++..+|
T Consensus 221 ~~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~~---~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~~~~~~~~~l 297 (392)
T cd03805 221 ERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPRV---AENVEYLEELQRLAEELLLLEDQVIFLPSISDSQKELLL 297 (392)
T ss_pred cccCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCCC---chhHHHHHHHHHHHHHhcCCCceEEEeCCCChHHHHHHH
Confidence 999999999999999864320 135554 778765321 1223566788888998 8999999999999999999999
Q ss_pred HHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHH
Q 002660 400 RLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCR 479 (895)
Q Consensus 400 ~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~ 479 (895)
+.| |++++||..|+||++++||||||+|||+++.||..|++.++.+|+++++ |+++++++|.+++++++.+++++
T Consensus 298 ~~a----d~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~~~~~~~~ 372 (392)
T cd03805 298 SSA----RALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDPDLADRMG 372 (392)
T ss_pred hhC----eEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHHhChHHHHHHH
Confidence 999 9999999999999999999999999999999999999999889999976 89999999999999999999999
Q ss_pred HHHHHHh-hcCCHHHHHHHH
Q 002660 480 QNGLKNI-HLFSWPEHCKTY 498 (895)
Q Consensus 480 ~~~~~~~-~~~s~~~~a~~~ 498 (895)
+++++.+ ++|||+.+++++
T Consensus 373 ~~a~~~~~~~~s~~~~~~~~ 392 (392)
T cd03805 373 AAGRKRVKEKFSTEAFAERL 392 (392)
T ss_pred HHHHHHHHHhcCHHHHhhhC
Confidence 9999999 699999998764
No 28
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=3.5e-34 Score=335.88 Aligned_cols=289 Identities=16% Similarity=0.121 Sum_probs=215.5
Q ss_pred CCCcEEEeccccchhHHHHHhccCCCCEEE-EeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEe
Q 002660 143 VWPVAIHGHYADAGDSAALLSGALNVPMLF-TGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 221 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~-t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~ 221 (895)
.+|||||+|...+.+++..+++..++|+|+ +.|+......... ....++.... ......++.+++
T Consensus 399 ~kpDIVH~h~~~a~~lg~lAa~~~gvPvIv~t~h~~~~~~~~~~----------~~~~~~~l~~----~l~~~~~~i~Vs 464 (694)
T PRK15179 399 SVPSVVHIWQDGSIFACALAALLAGVPRIVLSVRTMPPVDRPDR----------YRVEYDIIYS----ELLKMRGVALSS 464 (694)
T ss_pred cCCcEEEEeCCcHHHHHHHHHHHcCCCEEEEEeCCCccccchhH----------HHHHHHHHHH----HHHhcCCeEEEe
Confidence 689999999987778888888888999877 6676543221110 0011111111 111223456666
Q ss_pred CChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchh
Q 002660 222 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 301 (895)
Q Consensus 222 ~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (895)
.|....+.+...+ |.+..++.|||||||...|.+..... ..+
T Consensus 465 ~S~~~~~~l~~~~----------------------g~~~~kI~VI~NGVd~~~f~~~~~~~----------------~~~ 506 (694)
T PRK15179 465 NSQFAAHRYADWL----------------------GVDERRIPVVYNGLAPLKSVQDDACT----------------AMM 506 (694)
T ss_pred CcHHHHHHHHHHc----------------------CCChhHEEEECCCcCHHhcCCCchhh----------------HHH
Confidence 6766555443332 22334899999999988886422100 000
Q ss_pred HHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCccccccchHHHHHHHHHHHHhcCC
Q 002660 302 SEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDL 380 (895)
Q Consensus 302 ~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~-livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l 380 (895)
... +...+.+.++|+++||+.+.||++.+|+|+..+.+.. +++. +|+|+|+. ..++.++++++++
T Consensus 507 ~~~-~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~--p~~~LvIvG~G~~-----------~~~L~~l~~~lgL 572 (694)
T PRK15179 507 AQF-DARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAASH--PKVRFIMVGGGPL-----------LESVREFAQRLGM 572 (694)
T ss_pred Hhh-ccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHHHC--cCeEEEEEccCcc-----------hHHHHHHHHHcCC
Confidence 000 1112345678999999999999999999999886433 4454 48898764 3567788999999
Q ss_pred CCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCH--
Q 002660 381 YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQ-- 458 (895)
Q Consensus 381 ~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~-- 458 (895)
.++|.|+|+. +++..+|+.| |++|+||.+||||++++|||+||+|||+|+.||..|+|.++.+|++++|+|.
T Consensus 573 ~~~V~flG~~--~dv~~ll~aa----Dv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~ 646 (694)
T PRK15179 573 GERILFTGLS--RRVGYWLTQF----NAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTLPADTVTA 646 (694)
T ss_pred CCcEEEcCCc--chHHHHHHhc----CEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEeCCCCCCh
Confidence 9999999995 5899999999 9999999999999999999999999999999999999999999999998774
Q ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHH
Q 002660 459 QSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 459 ~~la~ai~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~ 503 (895)
++++++|.+++.+......+++++++.+ ++|||+.++++++++|+
T Consensus 647 ~~La~aL~~ll~~l~~~~~l~~~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 647 PDVAEALARIHDMCAADPGIARKAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred HHHHHHHHHHHhChhccHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 6899999998887666677888999998 69999999999999985
No 29
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=4.5e-33 Score=312.35 Aligned_cols=360 Identities=19% Similarity=0.191 Sum_probs=255.9
Q ss_pred eEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccc
Q 002660 5 NYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 84 (895)
Q Consensus 5 ~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~ 84 (895)
||++|+.+|+ +|..||+++++.+|+++|+++| |+|+|+|........ .
T Consensus 1 ~i~~i~~~~~----------~~~~gG~~~~~~~la~~L~~~g--~~v~v~~~~~~~~~~-------~------------- 48 (363)
T cd04955 1 KIAIIGTRGI----------PAKYGGFETFVEELAPRLVARG--HEVTVYCRSPYPKQK-------E------------- 48 (363)
T ss_pred CeEEEecCcC----------CcccCcHHHHHHHHHHHHHhcC--CCEEEEEccCCCCCc-------c-------------
Confidence 6899988886 4788999999999999999999 999999975321110 0
Q ss_pred cCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhc
Q 002660 85 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSG 164 (895)
Q Consensus 85 ~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~ 164 (895)
....|++++++|.... .. +..+...+...+.. +.. ..++|+||...... ..+..+++
T Consensus 49 --~~~~~i~~~~~~~~~~-~~---------~~~~~~~~~~~~~~----~~~------~~~~~~i~~~~~~~-~~~~~~~~ 105 (363)
T cd04955 49 --TEYNGVRLIHIPAPEI-GG---------LGTIIYDILAILHA----LFV------KRDIDHVHALGPAI-APFLPLLR 105 (363)
T ss_pred --cccCCceEEEcCCCCc-cc---------hhhhHHHHHHHHHH----Hhc------cCCeEEEEecCccH-HHHHHHHH
Confidence 0124888888875331 00 11111111111111 000 14466666555433 33344455
Q ss_pred cCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHH
Q 002660 165 ALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERK 244 (895)
Q Consensus 165 ~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~ 244 (895)
..++|++++.|+...... ..+. ....+.+. .|+..++.+|.|+++|+...+.+...|+.
T Consensus 106 ~~~~~~v~~~h~~~~~~~----~~~~-------~~~~~~~~--~~~~~~~~ad~ii~~s~~~~~~~~~~~~~-------- 164 (363)
T cd04955 106 LKGKKVVVNMDGLEWKRA----KWGR-------PAKRYLKF--GEKLAVKFADRLIADSPGIKEYLKEKYGR-------- 164 (363)
T ss_pred hcCCCEEEEccCcceeec----cccc-------chhHHHHH--HHHHHHhhccEEEeCCHHHHHHHHHhcCC--------
Confidence 569999999998643210 0000 01112222 35667899999999999877765444432
Q ss_pred HHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCC
Q 002660 245 LRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDP 324 (895)
Q Consensus 245 l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~ 324 (895)
+..+||||+|...+.+.. ....... ..+.+.++++||+.+
T Consensus 165 -----------------~~~~i~ngv~~~~~~~~~----------------------~~~~~~~-~~~~~~i~~~G~~~~ 204 (363)
T cd04955 165 -----------------DSTYIPYGADHVVSSEED----------------------EILKKYG-LEPGRYYLLVGRIVP 204 (363)
T ss_pred -----------------CCeeeCCCcChhhcchhh----------------------hhHHhcC-CCCCcEEEEEecccc
Confidence 238999999987765310 0111111 233457899999999
Q ss_pred CCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHH-hcCCCCcEEeCCCCCCCCHHHHHHHhh
Q 002660 325 KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLID-KYDLYGQVAYPKHHKQSDVPEIYRLAA 403 (895)
Q Consensus 325 ~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~-~~~l~~~v~~~g~~~~~el~~ly~~A~ 403 (895)
.||++.+++|+..+. ....+ +++|+++.... +...+. .++..++|.|+|+++.+++..+|+.|
T Consensus 205 ~Kg~~~li~a~~~l~---~~~~l-~ivG~~~~~~~-----------~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~a- 268 (363)
T cd04955 205 ENNIDDLIEAFSKSN---SGKKL-VIVGNADHNTP-----------YGKLLKEKAAADPRIIFVGPIYDQELLELLRYA- 268 (363)
T ss_pred cCCHHHHHHHHHhhc---cCceE-EEEcCCCCcch-----------HHHHHHHHhCCCCcEEEccccChHHHHHHHHhC-
Confidence 999999999999884 23333 47888754322 222222 56778899999999999999999999
Q ss_pred cCCcEEEecCCC-CCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH
Q 002660 404 KTKGVFINPAFI-EPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNG 482 (895)
Q Consensus 404 ~~~dv~v~ps~~-Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~ 482 (895)
|++++||.. |+||++++|||+||+|||+|+.|+..|++.+ +|+++++.|. ++++|.+++++++.+.+++.++
T Consensus 269 ---d~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~~--l~~~i~~l~~~~~~~~~~~~~~ 341 (363)
T cd04955 269 ---ALFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGDD--LASLLEELEADPEEVSAMAKAA 341 (363)
T ss_pred ---CEEEeCCccCCCCChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCchH--HHHHHHHHHhCHHHHHHHHHHH
Confidence 999999998 9999999999999999999999999999865 7889987776 9999999999999999999999
Q ss_pred HHHh-hcCCHHHHHHHHHHHHH
Q 002660 483 LKNI-HLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 483 ~~~~-~~~s~~~~a~~~~~~~~ 503 (895)
++.+ ++|||+.++++|+++|+
T Consensus 342 ~~~~~~~fs~~~~~~~~~~~y~ 363 (363)
T cd04955 342 RERIREKYTWEKIADQYEELYK 363 (363)
T ss_pred HHHHHHhCCHHHHHHHHHHHhC
Confidence 9998 58999999999999874
No 30
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=100.00 E-value=1.6e-33 Score=316.87 Aligned_cols=278 Identities=27% Similarity=0.388 Sum_probs=225.2
Q ss_pred CCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeC
Q 002660 143 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 222 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~ 222 (895)
.+||+||+|....+..+..+++..|+|+|++.|+.......... . .. .++.... .++..++.+|.|+++
T Consensus 81 ~~~dvvh~~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~---~-~~-----~~~~~~~--~~~~~~~~~d~ii~~ 149 (367)
T cd05844 81 HRPDLVHAHFGFDGVYALPLARRLGVPLVVTFHGFDATTSLALL---L-RS-----RWALYAR--RRRRLARRAALFIAV 149 (367)
T ss_pred hCCCEEEeccCchHHHHHHHHHHcCCCEEEEEeCccccccchhh---c-cc-----chhHHHH--HHHHHHHhcCEEEEC
Confidence 67999999987777788888899999999999975432211000 0 00 0111222 255678999999999
Q ss_pred ChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhH
Q 002660 223 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 302 (895)
Q Consensus 223 s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (895)
|+...+.+... ...+ .++.++|||+|.+.|.+...
T Consensus 150 s~~~~~~~~~~--~~~~---------------------~~i~vi~~g~d~~~~~~~~~---------------------- 184 (367)
T cd05844 150 SQFIRDRLLAL--GFPP---------------------EKVHVHPIGVDTAKFTPATP---------------------- 184 (367)
T ss_pred CHHHHHHHHHc--CCCH---------------------HHeEEecCCCCHHhcCCCCC----------------------
Confidence 99877665432 2222 38999999999988865320
Q ss_pred HhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCC
Q 002660 303 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY 381 (895)
Q Consensus 303 ~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~ 381 (895)
..+.+.++++|++.+.||++.+++|+..+.+. .+++.+ ++|+++. .+++..+++.+++.
T Consensus 185 -------~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~--~~~~~l~ivG~g~~-----------~~~~~~~~~~~~~~ 244 (367)
T cd05844 185 -------ARRPPRILFVGRFVEKKGPLLLLEAFARLARR--VPEVRLVIIGDGPL-----------LAALEALARALGLG 244 (367)
T ss_pred -------CCCCcEEEEEEeeccccChHHHHHHHHHHHHh--CCCeEEEEEeCchH-----------HHHHHHHHHHcCCC
Confidence 23567899999999999999999999998643 344444 7787652 35677888888888
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC------CCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCC
Q 002660 382 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF------IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDP 455 (895)
Q Consensus 382 ~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~------~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p 455 (895)
++|.|.|.++.+++..+|+.| |++|+||. .||||++++|||+||+|||+++.|+..|++.++.+|+++++
T Consensus 245 ~~v~~~g~~~~~~l~~~~~~a----d~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~~ 320 (367)
T cd05844 245 GRVTFLGAQPHAEVRELMRRA----RIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPE 320 (367)
T ss_pred CeEEECCCCCHHHHHHHHHhC----CEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEECC
Confidence 999999999999999999999 99999996 59999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHH
Q 002660 456 HDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLS 500 (895)
Q Consensus 456 ~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~ 500 (895)
.|+++++++|.+++++++.+++++.++++.+ ++|||+.+++++.+
T Consensus 321 ~d~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 321 GDVAALAAALGRLLADPDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 9999999999999999999999999999999 69999999998865
No 31
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=100.00 E-value=6.7e-34 Score=320.47 Aligned_cols=286 Identities=18% Similarity=0.218 Sum_probs=209.2
Q ss_pred CCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeC
Q 002660 143 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 222 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~ 222 (895)
.+|||||+|.+....+ ....+..++|+|++.|+...... ...+++. +..++.+|.+++.
T Consensus 84 ~~~Dvv~~h~~~~~~~-~~~~~~~~~~~i~~~H~~~~~~~--------------~~~~~~~------~~~~~~~d~~i~~ 142 (372)
T cd03792 84 LDADVVVIHDPQPLAL-PLFKKKRGRPWIWRCHIDLSSPN--------------RRVWDFL------QPYIEDYDAAVFH 142 (372)
T ss_pred CCCCEEEECCCCchhH-HHhhhcCCCeEEEEeeeecCCCc--------------HHHHHHH------HHHHHhCCEEeec
Confidence 5799999998753222 22333348999999997543211 0111122 2346788998888
Q ss_pred ChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhH
Q 002660 223 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 302 (895)
Q Consensus 223 s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (895)
+...... .+. ..++ +||||||...+.... . .......
T Consensus 143 ~~~~~~~------~~~---------------------~~~~-vipngvd~~~~~~~~--~-------------~~~~~~~ 179 (372)
T cd03792 143 LPEYVPP------QVP---------------------PRKV-IIPPSIDPLSGKNRE--L-------------SPADIEY 179 (372)
T ss_pred HHHhcCC------CCC---------------------CceE-EeCCCCCCCccccCC--C-------------CHHHHHH
Confidence 7432211 111 1144 999999975321100 0 0011223
Q ss_pred HhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCC
Q 002660 303 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYG 382 (895)
Q Consensus 303 ~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~ 382 (895)
.+++++..+++++|+++||+.+.||++.+++|++.+.+..+...+ +++|+++..+.. ....+..+.+..++.+
T Consensus 180 ~~~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l-~i~G~g~~~~~~------~~~~~~~~~~~~~~~~ 252 (372)
T cd03792 180 ILEKYGIDPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQL-VLVGSGATDDPE------GWIVYEEVLEYAEGDP 252 (372)
T ss_pred HHHHhCCCCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCEE-EEEeCCCCCCch------hHHHHHHHHHHhCCCC
Confidence 345566677899999999999999999999999998643344444 478887642211 1122333444566777
Q ss_pred cEEeCCCC--CCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHH
Q 002660 383 QVAYPKHH--KQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQS 460 (895)
Q Consensus 383 ~v~~~g~~--~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~ 460 (895)
+|.|.|.. +.+++..+|+.| |++++||..||||++++||||||+|||+++.||..+++.++.+|++++ +.++
T Consensus 253 ~v~~~~~~~~~~~~~~~~~~~a----d~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~--~~~~ 326 (372)
T cd03792 253 DIHVLTLPPVSDLEVNALQRAS----TVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVD--TVEE 326 (372)
T ss_pred CeEEEecCCCCHHHHHHHHHhC----eEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEeC--CcHH
Confidence 89998876 788999999999 999999999999999999999999999999999999999999999987 5678
Q ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHHcc
Q 002660 461 VADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAGC 505 (895)
Q Consensus 461 la~ai~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~~~ 505 (895)
++++|.+++++++.++++++++++.+ ++|||+.++++++++|+.+
T Consensus 327 ~a~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~ 372 (372)
T cd03792 327 AAVRILYLLRDPELRRKMGANAREHVRENFLITRHLKDYLYLISKL 372 (372)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHhC
Confidence 99999999999999999999999998 6999999999999999863
No 32
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=100.00 E-value=8.2e-33 Score=309.39 Aligned_cols=343 Identities=24% Similarity=0.287 Sum_probs=257.1
Q ss_pred CCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCccc
Q 002660 27 DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYI 106 (895)
Q Consensus 27 ~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~~~ 106 (895)
+.||+++++.+|+++|+++| |+|.+++...... ... ...+++++.++.....
T Consensus 8 ~~gG~e~~~~~l~~~L~~~g--~~v~v~~~~~~~~-------~~~----------------~~~~~~~~~~~~~~~~--- 59 (355)
T cd03819 8 ESGGVERGTLELARALVERG--HRSLVASAGGRLV-------AEL----------------EAEGSRHIKLPFISKN--- 59 (355)
T ss_pred ccCcHHHHHHHHHHHHHHcC--CEEEEEcCCCchH-------HHH----------------HhcCCeEEEccccccc---
Confidence 34899999999999999999 9999998642100 001 1136777776653321
Q ss_pred ccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHH
Q 002660 107 AKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLL 186 (895)
Q Consensus 107 ~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~ 186 (895)
.+..+ .+...+...+.+ .+||+||+|.....+.+..+++..++|+|++.|+.+....
T Consensus 60 ----~~~~~-~~~~~l~~~~~~--------------~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~---- 116 (355)
T cd03819 60 ----PLRIL-LNVARLRRLIRE--------------EKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVNF---- 116 (355)
T ss_pred ----hhhhH-HHHHHHHHHHHH--------------cCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhHH----
Confidence 11111 111222222222 6899999999877777777778889999999998754321
Q ss_pred HHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEe
Q 002660 187 KQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAII 266 (895)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vi 266 (895)
+ .+..++.+|.++++|+...+.+...++ .+..++.+|
T Consensus 117 ---------------~------~~~~~~~~~~vi~~s~~~~~~~~~~~~----------------------~~~~k~~~i 153 (355)
T cd03819 117 ---------------R------YNAIMARGDRVIAVSNFIADHIRENYG----------------------VDPDRIRVI 153 (355)
T ss_pred ---------------H------HHHHHHhcCEEEEeCHHHHHHHHHhcC----------------------CChhhEEEe
Confidence 0 122467899999999877766543332 222389999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc
Q 002660 267 PPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELAN 346 (895)
Q Consensus 267 p~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~ 346 (895)
|||+|...|.+..... ......++++...++.++++++||+.+.||++.+++|+..+.+. .++
T Consensus 154 ~ngi~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~--~~~ 216 (355)
T cd03819 154 PRGVDLDRFDPGAVPP---------------ERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALARLKKD--DPD 216 (355)
T ss_pred cCCccccccCccccch---------------HHHHHHHHHcCCCCCceEEEEeeccccccCHHHHHHHHHHHHhc--CCC
Confidence 9999998886532110 01111234444566788999999999999999999999999643 344
Q ss_pred EEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecC-CCCCCchHHHH
Q 002660 347 LTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPA-FIEPFGLTLIE 424 (895)
Q Consensus 347 l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps-~~Eg~gl~~~E 424 (895)
+.+ ++|.++..+ .+...+.+.+.++++.++|.|+|+ .+++..+|+.| |++++|| ..|+||++++|
T Consensus 217 ~~l~ivG~~~~~~-------~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~l~~a----d~~i~ps~~~e~~~~~l~E 283 (355)
T cd03819 217 VHLLIVGDAQGRR-------FYYAELLELIKRLGLQDRVTFVGH--CSDMPAAYALA----DIVVSASTEPEAFGRTAVE 283 (355)
T ss_pred eEEEEEECCcccc-------hHHHHHHHHHHHcCCcceEEEcCC--cccHHHHHHhC----CEEEecCCCCCCCchHHHH
Confidence 554 788876432 234566677888898889999999 78999999999 9999999 79999999999
Q ss_pred HHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHh-hcCCHHH
Q 002660 425 AAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVA-DKQLWARCRQNGLKNI-HLFSWPE 493 (895)
Q Consensus 425 a~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~-~~~~~~~~~~~~~~~~-~~~s~~~ 493 (895)
|||||+|||+++.||..|++.++.+|++++++|+++++++|..++. ++++++++++++++.+ ++|||+.
T Consensus 284 A~a~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~~~f~~~~ 354 (355)
T cd03819 284 AQAMGRPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVETLFSYDR 354 (355)
T ss_pred HHhcCCCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 9999999999999999999999889999999999999999976665 8999999999999999 5999975
No 33
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=6.6e-33 Score=309.60 Aligned_cols=291 Identities=16% Similarity=0.108 Sum_probs=212.7
Q ss_pred CCCcEEEeccccchhHHHHHhccCCCCEEEE-eCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEe
Q 002660 143 VWPVAIHGHYADAGDSAALLSGALNVPMLFT-GHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 221 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t-~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~ 221 (895)
.+|||||+|...+...+...+...|+|.+++ .|+......... ....|...++ -..+...+| +++
T Consensus 279 ~rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~~~~~~~~r~----------~~~e~~~~~~---a~~i~~~sd-~v~ 344 (578)
T PRK15490 279 RKLDYLSVWQDGACLMIALAALIAGVPRIQLGLRGLPPVVRKRL----------FKPEYEPLYQ---ALAVVPGVD-FMS 344 (578)
T ss_pred cCCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecccCCcchhhH----------HHHHHHHhhh---hceeEecch-hhh
Confidence 7899999999877777777777789999664 665322211100 0011111110 001234444 445
Q ss_pred CChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchh
Q 002660 222 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 301 (895)
Q Consensus 222 ~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (895)
.+....+.+...+ |.+.+++.+||||||...|.+..... ...+
T Consensus 345 ~s~~v~~~l~~~l----------------------gip~~KI~VIyNGVD~~rf~p~~~~~---------------~~~r 387 (578)
T PRK15490 345 NNHCVTRHYADWL----------------------KLEAKHFQVVYNGVLPPSTEPSSEVP---------------HKIW 387 (578)
T ss_pred ccHHHHHHHHHHh----------------------CCCHHHEEEEeCCcchhhcCccchhh---------------HHHH
Confidence 5554444332322 23334999999999999887643110 0001
Q ss_pred HHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCccccccchHHHHHHHHHHHHhcCC
Q 002660 302 SEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDL 380 (895)
Q Consensus 302 ~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~-livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l 380 (895)
... +...+++.++|+++||+.+.||+..+|+++..+.+.. +++. +++|+|+. ..++..+++++++
T Consensus 388 ~~~-~~~l~~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~--pdirLvIVGdG~~-----------~eeLk~la~elgL 453 (578)
T PRK15490 388 QQF-TQKTQDADTTIGGVFRFVGDKNPFAWIDFAARYLQHH--PATRFVLVGDGDL-----------RAEAQKRAEQLGI 453 (578)
T ss_pred HHh-hhccCCCCcEEEEEEEEehhcCHHHHHHHHHHHHhHC--CCeEEEEEeCchh-----------HHHHHHHHHHcCC
Confidence 111 1222355679999999999999999999998875433 4555 47898863 3567788999999
Q ss_pred CCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHH
Q 002660 381 YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQS 460 (895)
Q Consensus 381 ~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~ 460 (895)
.++|.|.|+ .+++..+|+.+ |+||+||.+||||++++||||||+|||+|+.||..|+|.++.+|+++++.|+++
T Consensus 454 ~d~V~FlG~--~~Dv~~~LaaA----DVfVlPS~~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~nG~LVp~~D~~a 527 (578)
T PRK15490 454 LERILFVGA--SRDVGYWLQKM----NVFILFSRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGFILDDAQTVN 527 (578)
T ss_pred CCcEEECCC--hhhHHHHHHhC----CEEEEcccccCccHHHHHHHHhCCCEEEeCCCCcHHHcccCCcEEEECCCChhh
Confidence 999999999 57999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH---HHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHHc
Q 002660 461 VADAL---LKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAG 504 (895)
Q Consensus 461 la~ai---~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~~ 504 (895)
+++++ .++....+....+++++++.+ ++|||+.++++|.++|..
T Consensus 528 La~ai~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 528 LDQACRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 88887 334445555667889999999 599999999999999985
No 34
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=2e-32 Score=306.39 Aligned_cols=362 Identities=22% Similarity=0.256 Sum_probs=262.2
Q ss_pred eEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccc
Q 002660 5 NYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 84 (895)
Q Consensus 5 ~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~ 84 (895)
||++++.... |..||.+.++..|+++|+++| |+|+++|......... +
T Consensus 1 kIl~i~~~~~-----------p~~~G~~~~~~~l~~~L~~~g--~~v~~~~~~~~~~~~~--~----------------- 48 (364)
T cd03814 1 RIAIVTDTFL-----------PQVNGVVRTLQRLVEHLRARG--HEVLVIAPGPFRESEG--P----------------- 48 (364)
T ss_pred CeEEEecccC-----------ccccceehHHHHHHHHHHHCC--CEEEEEeCCchhhccC--C-----------------
Confidence 6888885553 677999999999999999999 9999999764221100 0
Q ss_pred cCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccc-cchhHHHHHh
Q 002660 85 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYA-DAGDSAALLS 163 (895)
Q Consensus 85 ~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~-~~~~~~~~~~ 163 (895)
.....+...+.... .... ..+. ....+...+. ..+||+||++.. ..+..+..++
T Consensus 49 ----~~~~~~~~~~~~~~-~~~~--~~~~----~~~~~~~~~~--------------~~~pdii~~~~~~~~~~~~~~~~ 103 (364)
T cd03814 49 ----ARVVPVPSVPLPGY-PEIR--LALP----PRRRVRRLLD--------------AFAPDVVHIATPGPLGLAALRAA 103 (364)
T ss_pred ----CCceeecccccCcc-cceE--eccc----chhhHHHHHH--------------hcCCCEEEEeccchhhHHHHHHH
Confidence 01222222222111 0000 0000 0111111111 167999999875 3455667778
Q ss_pred ccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHH
Q 002660 164 GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 243 (895)
Q Consensus 164 ~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~ 243 (895)
+..++|++++.|+.+........ .. ... .+... .++..++.+|.++++|....+.+.....
T Consensus 104 ~~~~~~~i~~~~~~~~~~~~~~~-----~~-~~~---~~~~~--~~~~~~~~~d~i~~~s~~~~~~~~~~~~-------- 164 (364)
T cd03814 104 RRLGIPVVTSYHTDFPEYLRYYG-----LG-PLS---WLAWA--YLRWFHNRADRVLVPSPSLADELRARGF-------- 164 (364)
T ss_pred HHcCCCEEEEEecChHHHhhhcc-----cc-hHh---HhhHH--HHHHHHHhCCEEEeCCHHHHHHHhccCC--------
Confidence 88899999999987653321111 00 001 11112 2455688999999999987764332211
Q ss_pred HHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCC
Q 002660 244 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD 323 (895)
Q Consensus 244 ~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~ 323 (895)
.++.++|+|+|.+.|.+..... .....+. ..++++++++|++.
T Consensus 165 -----------------~~~~~~~~g~~~~~~~~~~~~~-------------------~~~~~~~-~~~~~~i~~~G~~~ 207 (364)
T cd03814 165 -----------------RRVRLWPRGVDTELFHPRRRDE-------------------ALRARLG-PPDRPVLLYVGRLA 207 (364)
T ss_pred -----------------CceeecCCCccccccCcccccH-------------------HHHHHhC-CCCCeEEEEEeccc
Confidence 2789999999998886533110 1112222 45678899999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHh
Q 002660 324 PKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLA 402 (895)
Q Consensus 324 ~~Kgi~~ll~A~~~l~~~~~~~~l~-livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A 402 (895)
+.||++.+++++..+.+. +++. +++|.++..+. +. +..++|.|.|+++.+++..+|+.|
T Consensus 208 ~~k~~~~~i~~~~~l~~~---~~~~l~i~G~~~~~~~-----------~~------~~~~~v~~~g~~~~~~~~~~~~~~ 267 (364)
T cd03814 208 PEKNLEALLDADLPLRRR---PPVRLVIVGDGPARAR-----------LE------ARYPNVHFLGFLDGEELAAAYASA 267 (364)
T ss_pred cccCHHHHHHHHHHhhhc---CCceEEEEeCCchHHH-----------Hh------ccCCcEEEEeccCHHHHHHHHHhC
Confidence 999999999999999653 3444 47887764211 11 456789999999999999999999
Q ss_pred hcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH
Q 002660 403 AKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNG 482 (895)
Q Consensus 403 ~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~ 482 (895)
|++|+|+..|+||++++||||||+|||+++.|+..+++.++.+|+++++.|.++++++|.+++++++.+.++++++
T Consensus 268 ----d~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~ 343 (364)
T cd03814 268 ----DVFVFPSRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLADPELRRRMAARA 343 (364)
T ss_pred ----CEEEECcccccCCcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999899999999999999999999999999999999999
Q ss_pred HHHhhcCCHHHHHHHHHHHHH
Q 002660 483 LKNIHLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 483 ~~~~~~~s~~~~a~~~~~~~~ 503 (895)
++.+++|+|+.++++++++|+
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~ 364 (364)
T cd03814 344 RAEAERRSWEAFLDNLLEAYR 364 (364)
T ss_pred HHHHhhcCHHHHHHHHHHhhC
Confidence 999989999999999998873
No 35
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=2.3e-32 Score=316.38 Aligned_cols=293 Identities=21% Similarity=0.287 Sum_probs=233.9
Q ss_pred CCCcEEEeccc-cchhHHHHHhccCCCCEEEEeCCCchhhHH-HHHHHhhccHHHHHh-hhhhhHHHHHHHhhhcccCEE
Q 002660 143 VWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLE-QLLKQARLSRDEINA-TYKIMRRIEAEELSLDASEIV 219 (895)
Q Consensus 143 ~~pDvVh~h~~-~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~e~~~l~~ad~v 219 (895)
.++|+||+|.. .+++++..+++..++|+|+|.|+.+..... .+....+ ....... ..+++..+ ++.+++.||.|
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~-~~~~~~~~~~~~~~~l--~~~~~~~ad~I 248 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADW-EMSYFRRLWIRFFESL--GRLAYQAADRI 248 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhccc-chHHHHHHHHHHHHHH--HHHHHHhCCEE
Confidence 47999999975 567888888889999999999997653321 1211110 1111111 12233333 66789999999
Q ss_pred EeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 002660 220 ITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPP 299 (895)
Q Consensus 220 i~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 299 (895)
+++|+...+.+.. + |.+.+++.+||||+|.+.|.+....
T Consensus 249 i~~s~~~~~~~~~-~----------------------g~~~~ki~vIpNgid~~~f~~~~~~------------------ 287 (475)
T cd03813 249 TTLYEGNRERQIE-D----------------------GADPEKIRVIPNGIDPERFAPARRA------------------ 287 (475)
T ss_pred EecCHHHHHHHHH-c----------------------CCCHHHeEEeCCCcCHHHcCCcccc------------------
Confidence 9999876655432 1 2222389999999999988754310
Q ss_pred hhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhc
Q 002660 300 IWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKY 378 (895)
Q Consensus 300 ~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~ 378 (895)
....+.++|+++||+.+.||++.+++|++.+.+. .+++.+ |+|+++. ..++.+++.++++++
T Consensus 288 --------~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~p~~~l~IvG~g~~-------~~~~~~e~~~li~~l 350 (475)
T cd03813 288 --------RPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKK--IPDAEGWVIGPTDE-------DPEYAEECRELVESL 350 (475)
T ss_pred --------ccCCCCcEEEEEeccccccCHHHHHHHHHHHHHh--CCCeEEEEECCCCc-------ChHHHHHHHHHHHHh
Confidence 0135678999999999999999999999998643 455554 7888752 234568888999999
Q ss_pred CCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhcccc------CCCeEE
Q 002660 379 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV------LDNGLL 452 (895)
Q Consensus 379 ~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~------~~~g~l 452 (895)
++.++|.|+| .+++.++|+.| |++|+||..|+||++++||||||+|||+|+.|+..|++.+ +.+|++
T Consensus 351 ~l~~~V~f~G---~~~v~~~l~~a----Dv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~l 423 (475)
T cd03813 351 GLEDNVKFTG---FQNVKEYLPKL----DVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEV 423 (475)
T ss_pred CCCCeEEEcC---CccHHHHHHhC----CEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEE
Confidence 9999999999 57899999999 9999999999999999999999999999999999999988 568999
Q ss_pred eCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHH
Q 002660 453 VDPHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 453 v~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~ 503 (895)
++|.|+++++++|.+++++++.++++++++++.+ +.|+|+.++++|.++|+
T Consensus 424 v~~~d~~~la~ai~~ll~~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 424 VPPADPEALARAILRLLKDPELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred ECCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999 58999999999999884
No 36
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=100.00 E-value=1.7e-32 Score=307.22 Aligned_cols=347 Identities=14% Similarity=0.121 Sum_probs=244.5
Q ss_pred eeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcC--CCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCc
Q 002660 4 NNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSM--PGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDD 81 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~--G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~ 81 (895)
|||++++.. + +..||+++++.+++++|.++ | |+|.++++...... ...
T Consensus 1 mkI~~~~~~-~-----------~~~GG~e~~~~~l~~~L~~~~~g--~~v~v~~~~~~~~~---------~~~------- 50 (359)
T PRK09922 1 MKIAFIGEA-V-----------SGFGGMETVISNVINTFEESKIN--CEMFFFCRNDKMDK---------AWL------- 50 (359)
T ss_pred CeeEEeccc-c-----------cCCCchhHHHHHHHHHhhhcCcc--eeEEEEecCCCCCh---------HHH-------
Confidence 799999732 2 56799999999999999999 7 99999987432100 000
Q ss_pred ccccCCCCCCeEEE-ecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHH
Q 002660 82 FMDDMGESSGAYII-RIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAA 160 (895)
Q Consensus 82 ~~~~~~~~~gv~i~-~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~ 160 (895)
....++ .++..+. ..+.. ......+.+++++ .+||+||+|.....+++.
T Consensus 51 --------~~~~~~~~~~~~~~-~~~~~-------~~~~~~l~~~l~~--------------~~~Dii~~~~~~~~~~~~ 100 (359)
T PRK09922 51 --------KEIKYAQSFSNIKL-SFLRR-------AKHVYNFSKWLKE--------------TQPDIVICIDVISCLYAN 100 (359)
T ss_pred --------Hhcchhcccccchh-hhhcc-------cHHHHHHHHHHHh--------------cCCCEEEEcCHHHHHHHH
Confidence 011100 0111000 00000 0111222222222 789999999876666666
Q ss_pred HHhccCCCC--EEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCC
Q 002660 161 LLSGALNVP--MLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFD 238 (895)
Q Consensus 161 ~~~~~~~ip--~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~ 238 (895)
.+++..++| ++.+.|....... .+ +...+..+|.++++|+...+.+... ...
T Consensus 101 ~~~~~~~~~~~~~~~~h~~~~~~~----------------~~--------~~~~~~~~d~~i~~S~~~~~~~~~~--~~~ 154 (359)
T PRK09922 101 KARKKSGKQFKIFSWPHFSLDHKK----------------HA--------ECKKITCADYHLAISSGIKEQMMAR--GIS 154 (359)
T ss_pred HHHHHhCCCCeEEEEecCcccccc----------------hh--------hhhhhhcCCEEEEcCHHHHHHHHHc--CCC
Confidence 666666655 4666675321110 00 0011468999999998776665432 122
Q ss_pred hHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEE
Q 002660 239 PVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILA 318 (895)
Q Consensus 239 ~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~ 318 (895)
+ +++.+||||+|.+.+..... ...+++++++
T Consensus 155 ~---------------------~ki~vi~N~id~~~~~~~~~----------------------------~~~~~~~i~~ 185 (359)
T PRK09922 155 A---------------------QRISVIYNPVEIKTIIIPPP----------------------------ERDKPAVFLY 185 (359)
T ss_pred H---------------------HHEEEEcCCCCHHHccCCCc----------------------------ccCCCcEEEE
Confidence 2 38999999999765432110 0134678999
Q ss_pred EeCCC--CCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCC--C
Q 002660 319 LARPD--PKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQ--S 393 (895)
Q Consensus 319 vgrl~--~~Kgi~~ll~A~~~l~~~~~~~~l~-livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~--~ 393 (895)
+||+. ..||+..+++|+..+. + ++. +++|+|++ .+++.++++.+++.++|.|+|+++. +
T Consensus 186 ~Grl~~~~~k~~~~l~~a~~~~~---~--~~~l~ivG~g~~-----------~~~l~~~~~~~~l~~~v~f~G~~~~~~~ 249 (359)
T PRK09922 186 VGRLKFEGQKNVKELFDGLSQTT---G--EWQLHIIGDGSD-----------FEKCKAYSRELGIEQRIIWHGWQSQPWE 249 (359)
T ss_pred EEEEecccCcCHHHHHHHHHhhC---C--CeEEEEEeCCcc-----------HHHHHHHHHHcCCCCeEEEecccCCcHH
Confidence 99986 4699999999999873 2 344 47898875 3556788888999999999998754 6
Q ss_pred CHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcC-CCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCH
Q 002660 394 DVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK-NGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADK 472 (895)
Q Consensus 394 el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~-~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~ 472 (895)
++.++|+.| |++|+||..||||++++||||||+|||+++ .||..|++.++.+|++++|+|+++++++|.++++++
T Consensus 250 ~~~~~~~~~----d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~ 325 (359)
T PRK09922 250 VVQQKIKNV----SALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVISGE 325 (359)
T ss_pred HHHHHHhcC----cEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEECCCCHHHHHHHHHHHHhCc
Confidence 889999999 999999999999999999999999999999 899999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccC
Q 002660 473 QLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKP 507 (895)
Q Consensus 473 ~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~~~ 507 (895)
+.+. .....+.+.+|+.+...+++.++|..++.
T Consensus 326 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
T PRK09922 326 VKYQ--HDAIPNSIERFYEVLYFKNLNNALFSKLQ 358 (359)
T ss_pred ccCC--HHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 7541 22333344788999999999999987754
No 37
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=100.00 E-value=5e-32 Score=300.47 Aligned_cols=332 Identities=19% Similarity=0.173 Sum_probs=234.3
Q ss_pred eeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCccc
Q 002660 4 NNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 83 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~ 83 (895)
|||++|+.... + .+ +|..||+++++.+|+++|+++| |+|++++.......
T Consensus 1 MkI~~i~~~~~----~--~~-~~~~GG~~~~~~~l~~~L~~~g--~~V~v~~~~~~~~~--------------------- 50 (335)
T cd03802 1 MRIALVAPPRE----P--VP-PPAYGGTERVVAALTEGLVARG--HEVTLFASGDSKTA--------------------- 50 (335)
T ss_pred CeEEEEcCCcc----c--CC-CcccCcHHHHHHHHHHHHHhcC--ceEEEEecCCCCcc---------------------
Confidence 79999985443 0 01 3688999999999999999999 99999997532110
Q ss_pred ccCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHh
Q 002660 84 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLS 163 (895)
Q Consensus 84 ~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~ 163 (895)
........... .... .. ...........+ .+.+. ..+||+||+|.+..... ++
T Consensus 51 --------~~~~~~~~~~~--~~~~---~~-~~~~~~~~~~~~---~~~~~-------~~~~Divh~~~~~~~~~---~~ 103 (335)
T cd03802 51 --------APLVPVVPEPL--RLDA---PG-RDRAEAEALALA---ERALA-------AGDFDIVHNHSLHLPLP---FA 103 (335)
T ss_pred --------cceeeccCCCc--cccc---ch-hhHhhHHHHHHH---HHHHh-------cCCCCEEEecCcccchh---hh
Confidence 00011110000 0000 00 000001111111 11111 26799999999855544 56
Q ss_pred ccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHH
Q 002660 164 GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 243 (895)
Q Consensus 164 ~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~ 243 (895)
+..++|+|++.|+........ ........+.++++|+...+.....
T Consensus 104 ~~~~~~~v~~~h~~~~~~~~~------------------------~~~~~~~~~~~~~~s~~~~~~~~~~---------- 149 (335)
T cd03802 104 RPLPVPVVTTLHGPPDPELLK------------------------LYYAARPDVPFVSISDAQRRPWPPL---------- 149 (335)
T ss_pred cccCCCEEEEecCCCCcccch------------------------HHHhhCcCCeEEEecHHHHhhcccc----------
Confidence 778999999999875433100 0123567788889888655432111
Q ss_pred HHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCC
Q 002660 244 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD 323 (895)
Q Consensus 244 ~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~ 323 (895)
.++.+||||+|.+.|.+. ..++..++++||+.
T Consensus 150 -----------------~~~~vi~ngvd~~~~~~~-------------------------------~~~~~~i~~~Gr~~ 181 (335)
T cd03802 150 -----------------PWVATVHNGIDLDDYPFR-------------------------------GPKGDYLLFLGRIS 181 (335)
T ss_pred -----------------cccEEecCCcChhhCCCC-------------------------------CCCCCEEEEEEeec
Confidence 289999999999888652 13467899999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcC-CCCcEEeCCCCCCCCHHHHHHHh
Q 002660 324 PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYD-LYGQVAYPKHHKQSDVPEIYRLA 402 (895)
Q Consensus 324 ~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~-l~~~v~~~g~~~~~el~~ly~~A 402 (895)
+.||++.+++++... ..++ +++|.++..+ .+........ +.++|.|+|+++.+++..+|+.|
T Consensus 182 ~~Kg~~~li~~~~~~-----~~~l-~i~G~~~~~~-----------~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~ 244 (335)
T cd03802 182 PEKGPHLAIRAARRA-----GIPL-KLAGPVSDPD-----------YFYREIAPELLDGPDIEYLGEVGGAEKAELLGNA 244 (335)
T ss_pred cccCHHHHHHHHHhc-----CCeE-EEEeCCCCHH-----------HHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhC
Confidence 999999999998754 2334 4788876422 2222222222 56789999999999999999999
Q ss_pred hcCCcEEEecCC-CCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Q 002660 403 AKTKGVFINPAF-IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQN 481 (895)
Q Consensus 403 ~~~~dv~v~ps~-~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~ 481 (895)
|++|+||. .|+||++++||||||+|||+++.||..|++.++.+|+++++ +++++++|.++++.+. .+
T Consensus 245 ----d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~~~~~------~~ 312 (335)
T cd03802 245 ----RALLFPILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARADRLDR------AA 312 (335)
T ss_pred ----cEEEeCCcccCCcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHhccHH------HH
Confidence 99999997 59999999999999999999999999999999889999985 9999999999876432 34
Q ss_pred HHHHh-hcCCHHHHHHHHHHHHH
Q 002660 482 GLKNI-HLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 482 ~~~~~-~~~s~~~~a~~~~~~~~ 503 (895)
+++.+ ++|||+..+++|+++|+
T Consensus 313 ~~~~~~~~~s~~~~~~~~~~~y~ 335 (335)
T cd03802 313 CRRRAERRFSAARMVDDYLALYR 335 (335)
T ss_pred HHHHHHHhCCHHHHHHHHHHHhC
Confidence 55666 69999999999999874
No 38
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=9.3e-32 Score=300.89 Aligned_cols=353 Identities=21% Similarity=0.249 Sum_probs=255.5
Q ss_pred eEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccc
Q 002660 5 NYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 84 (895)
Q Consensus 5 ~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~ 84 (895)
||++|+.... |+.||.++++.+|+++|.++| |+|+|++........ ..
T Consensus 1 kil~i~~~~~-----------p~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~-------~~------------ 48 (357)
T cd03795 1 RVLHVGKFYP-----------PDRGGIEQVIRDLAEGLAARG--IEVAVLCASPEPKGR-------DE------------ 48 (357)
T ss_pred CeeEecCCCC-----------CCCCcHHHHHHHHHHHHHhCC--CceEEEecCCCCcch-------hh------------
Confidence 6888885553 779999999999999999999 999999875322111 00
Q ss_pred cCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhc
Q 002660 85 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSG 164 (895)
Q Consensus 85 ~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~ 164 (895)
...+..+.+++.... . ..+.....+ ...+. + ...+||+||+|.............
T Consensus 49 ---~~~~~~~~~~~~~~~-----~-~~~~~~~~~----~~~~~-----~-------~~~~~Dii~~~~~~~~~~~~~~~~ 103 (357)
T cd03795 49 ---ERNGHRVIRAPSLLN-----V-ASTPFSPSF----FKQLK-----K-------LAKKADVIHLHFPNPLADLALLLL 103 (357)
T ss_pred ---hccCceEEEeecccc-----c-ccccccHHH----HHHHH-----h-------cCCCCCEEEEecCcchHHHHHHHh
Confidence 012455666553211 0 011111111 11111 0 126799999998643322222333
Q ss_pred cCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHH
Q 002660 165 ALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERK 244 (895)
Q Consensus 165 ~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~ 244 (895)
..++|.+++.|+..... .. .+++...+ ++..++.+|.|+++|+...+.....+.. .
T Consensus 104 ~~~~~~i~~~h~~~~~~-------~~--------~~~~~~~~--~~~~~~~~d~vi~~s~~~~~~~~~~~~~-~------ 159 (357)
T cd03795 104 PRKKPVVVHWHSDIVKQ-------KL--------LLKLYRPL--QRRFLRRADAIVATSPNYAETSPVLRRF-R------ 159 (357)
T ss_pred ccCceEEEEEcChhhcc-------ch--------hhhhhhHH--HHHHHHhcCEEEeCcHHHHHHHHHhcCC-c------
Confidence 36899999999743211 00 11112222 4557899999999998776654333211 1
Q ss_pred HHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCC
Q 002660 245 LRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDP 324 (895)
Q Consensus 245 l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~ 324 (895)
.++.++|||+|...+.+..... ........+.++|+++||+.+
T Consensus 160 ----------------~~~~~i~~gi~~~~~~~~~~~~---------------------~~~~~~~~~~~~i~~~G~~~~ 202 (357)
T cd03795 160 ----------------DKVRVIPLGLDPARYPRPDALE---------------------EAIWRRAAGRPFFLFVGRLVY 202 (357)
T ss_pred ----------------cceEEecCCCChhhcCCcchhh---------------------hHhhcCCCCCcEEEEeccccc
Confidence 2899999999998876432100 011122456789999999999
Q ss_pred CCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhc
Q 002660 325 KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAK 404 (895)
Q Consensus 325 ~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~ 404 (895)
.||++.+++|++++. ...+ +++|+++. ...+.+.+.+.++.++|.|+|+++.+++..+|+.|
T Consensus 203 ~K~~~~li~a~~~l~----~~~l-~i~G~g~~-----------~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~a-- 264 (357)
T cd03795 203 YKGLDVLLEAAAALP----DAPL-VIVGEGPL-----------EAELEALAAALGLLDRVRFLGRLDDEEKAALLAAC-- 264 (357)
T ss_pred ccCHHHHHHHHHhcc----CcEE-EEEeCChh-----------HHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhC--
Confidence 999999999999884 2333 47787753 34566677788899999999999999999999999
Q ss_pred CCcEEEecCC--CCCCchHHHHHHHcCCCEEEcCCCCchhcccc-CCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Q 002660 405 TKGVFINPAF--IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV-LDNGLLVDPHDQQSVADALLKLVADKQLWARCRQN 481 (895)
Q Consensus 405 ~~dv~v~ps~--~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~-~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~ 481 (895)
|++++||. .|+||++++|||+||+|||+++.|+..+.+.+ +.+|++++++|+++++++|.+++++++.++.++++
T Consensus 265 --d~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~~~~~~~~~~~ 342 (357)
T cd03795 265 --DVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLEDPELRERLGEA 342 (357)
T ss_pred --CEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHCHHHHHHHHHH
Confidence 99999986 69999999999999999999999999998886 88999999999999999999999999999999999
Q ss_pred HHHHh-hcCCHHHHH
Q 002660 482 GLKNI-HLFSWPEHC 495 (895)
Q Consensus 482 ~~~~~-~~~s~~~~a 495 (895)
+++.+ ++|||+.++
T Consensus 343 ~~~~~~~~~s~~~~~ 357 (357)
T cd03795 343 ARERAEEEFTADRMV 357 (357)
T ss_pred HHHHHHHhcchHhhC
Confidence 99999 699998764
No 39
>PLN02846 digalactosyldiacylglycerol synthase
Probab=100.00 E-value=1.1e-31 Score=300.07 Aligned_cols=381 Identities=15% Similarity=0.070 Sum_probs=243.8
Q ss_pred ceeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcc
Q 002660 3 FNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDF 82 (895)
Q Consensus 3 ~m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~ 82 (895)
.|||++++--++ |..+|+...+..++.+|+++|. |+|+||++..........|+.....-.+ .+.
T Consensus 4 ~mrIaivTdt~l-----------P~vnGva~s~~~~a~~L~~~G~-heV~vvaP~~~~~~~~~~~~~~~~f~~~---~~~ 68 (462)
T PLN02846 4 KQHIAIFTTASL-----------PWMTGTAVNPLFRAAYLAKDGD-REVTLVIPWLSLKDQKLVYPNKITFSSP---SEQ 68 (462)
T ss_pred CCEEEEEEcCCC-----------CCCCCeeccHHHHHHHHHhcCC-cEEEEEecCCccccccccccccccccCc---hhh
Confidence 389999996665 8999999999999999999992 3999999864321111111100000000 000
Q ss_pred cccCCCCCCeEEEecCCCCCCcccccccCCCChH-HHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccc-cchhH--
Q 002660 83 MDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIP-EFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYA-DAGDS-- 158 (895)
Q Consensus 83 ~~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~-~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~-~~~~~-- 158 (895)
...+.+..+-++.+++.-+. ...+...-+++.. -....+.+.+.. .+|||||+|.+ ..++.
T Consensus 69 e~~~~~~~~~~v~r~~s~~~-p~yp~r~~~~~r~~~~~~~i~~~l~~--------------~~pDVIHv~tP~~LG~~~~ 133 (462)
T PLN02846 69 EAYVRQWLEERISFLPKFSI-KFYPGKFSTDKRSILPVGDISETIPD--------------EEADIAVLEEPEHLTWYHH 133 (462)
T ss_pred hhhhhhhccCeEEEeccccc-ccCcccccccccccCChHHHHHHHHh--------------cCCCEEEEcCchhhhhHHH
Confidence 00010111335556554433 1111110010000 011223333332 78999999997 45665
Q ss_pred HHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhh-cccCEEEeCChHHHHHHHhhhcCC
Q 002660 159 AALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSL-DASEIVITSTRQEIEEQWRLYDGF 237 (895)
Q Consensus 159 ~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l-~~ad~vi~~s~~~~~~~~~~~~~~ 237 (895)
+..+++++++ +|.++|.....+.... ..|... ....++..++ +. .++|.|+++|....+ +.+
T Consensus 134 g~~~~~k~~~-vV~tyHT~y~~Y~~~~-~~g~~~----~~l~~~~~~~-----~~r~~~d~vi~pS~~~~~-l~~----- 196 (462)
T PLN02846 134 GKRWKTKFRL-VIGIVHTNYLEYVKRE-KNGRVK----AFLLKYINSW-----VVDIYCHKVIRLSAATQD-YPR----- 196 (462)
T ss_pred HHHHHhcCCc-EEEEECCChHHHHHHh-ccchHH----HHHHHHHHHH-----HHHHhcCEEEccCHHHHH-Hhh-----
Confidence 6677777755 8889999654432221 111111 1111112221 11 248999999974322 211
Q ss_pred ChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCC--CcE
Q 002660 238 DPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPR--KPV 315 (895)
Q Consensus 238 ~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 315 (895)
.+.+.++|||.+.|.+..... .... ...+ .+.
T Consensus 197 ------------------------~~i~~v~GVd~~~f~~~~~~~---------------------~~~~-~~~~~~~~~ 230 (462)
T PLN02846 197 ------------------------SIICNVHGVNPKFLEIGKLKL---------------------EQQK-NGEQAFTKG 230 (462)
T ss_pred ------------------------CEEecCceechhhcCCCcccH---------------------hhhc-CCCCCcceE
Confidence 445567999999887643110 0011 1222 357
Q ss_pred EEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCC
Q 002660 316 ILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSD 394 (895)
Q Consensus 316 il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~-livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~e 394 (895)
++|+||+.++||++.+|+|+..+.+.. +++. +|+|+|++ ..++.+++.++++..++ |.|. .+
T Consensus 231 ~l~vGRL~~eK~~~~Li~a~~~l~~~~--~~~~l~ivGdGp~-----------~~~L~~~a~~l~l~~~v-f~G~---~~ 293 (462)
T PLN02846 231 AYYIGKMVWSKGYKELLKLLHKHQKEL--SGLEVDLYGSGED-----------SDEVKAAAEKLELDVRV-YPGR---DH 293 (462)
T ss_pred EEEEecCcccCCHHHHHHHHHHHHhhC--CCeEEEEECCCcc-----------HHHHHHHHHhcCCcEEE-ECCC---CC
Confidence 999999999999999999999886433 3444 48899986 35566788888876444 7776 34
Q ss_pred HHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHH
Q 002660 395 VPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQL 474 (895)
Q Consensus 395 l~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~ 474 (895)
..++|+.+ ||||+||..|+||++++||||||+|||+++.++ .+++.++.+|++++ |.++++++|.++++++.
T Consensus 294 ~~~~~~~~----DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~--~~~~~a~ai~~~l~~~~- 365 (462)
T PLN02846 294 ADPLFHDY----KVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTYD--DGKGFVRATLKALAEEP- 365 (462)
T ss_pred HHHHHHhC----CEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEecC--CHHHHHHHHHHHHccCc-
Confidence 45899999 999999999999999999999999999999997 59999999999884 89999999999998532
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHcc
Q 002660 475 WARCRQNGLKNIHLFSWPEHCKTYLSRIAGC 505 (895)
Q Consensus 475 ~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~ 505 (895)
.+++..+ .+.|||+..++++++.++--
T Consensus 366 -~~~~~~a---~~~~SWe~~~~~l~~~~~~~ 392 (462)
T PLN02846 366 -APLTDAQ---RHELSWEAATERFLRVADLD 392 (462)
T ss_pred -hhHHHHH---HHhCCHHHHHHHHHHHhccC
Confidence 2222222 25999999999999999843
No 40
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=100.00 E-value=2e-33 Score=287.11 Aligned_cols=365 Identities=17% Similarity=0.230 Sum_probs=264.5
Q ss_pred eeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCccc
Q 002660 4 NNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 83 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~ 83 (895)
++|+|+|.|.+ |.+||++.++..|++.|-+.| |.|.++|-.+.+. . +...
T Consensus 1 ~~i~mVsdff~-----------P~~ggveshiy~lSq~li~lg--hkVvvithayg~r-~------giry---------- 50 (426)
T KOG1111|consen 1 SRILMVSDFFY-----------PSTGGVESHIYALSQCLIRLG--HKVVVITHAYGNR-V------GIRY---------- 50 (426)
T ss_pred CcceeeCcccc-----------cCCCChhhhHHHhhcchhhcC--CeEEEEeccccCc-c------ceee----------
Confidence 47999999999 999999999999999999999 9999999876432 1 1211
Q ss_pred ccCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccc--hhHHHH
Q 002660 84 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADA--GDSAAL 161 (895)
Q Consensus 84 ~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~--~~~~~~ 161 (895)
.++|++|+.+|.... ......+.+......+...+.+ ++..+||.|..++ +--+..
T Consensus 51 ----lt~glkVyylp~~v~----~n~tT~ptv~~~~Pllr~i~lr--------------E~I~ivhghs~fS~lahe~l~ 108 (426)
T KOG1111|consen 51 ----LTNGLKVYYLPAVVG----YNQTTFPTVFSDFPLLRPILLR--------------ERIEIVHGHSPFSYLAHEALM 108 (426)
T ss_pred ----ecCCceEEEEeeeee----ecccchhhhhccCcccchhhhh--------------hceEEEecCChHHHHHHHHHH
Confidence 245788888886322 1222222222221111111111 5799999998743 334556
Q ss_pred HhccCCCCEEEEeCCCchhh-HHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChH
Q 002660 162 LSGALNVPMLFTGHSLGRDK-LEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPV 240 (895)
Q Consensus 162 ~~~~~~ip~v~t~H~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~ 240 (895)
.++.+|.++|+|-|+++-.. .... +... .-...+...|++||+|..-.+... .....
T Consensus 109 hartMGlktVfTdHSlfGfad~~si----------------~~n~--ll~~sL~~id~~IcVshtskentv-lr~~L--- 166 (426)
T KOG1111|consen 109 HARTMGLKTVFTDHSLFGFADIGSI----------------LTNK--LLPLSLANIDRIICVSHTSKENTV-LRGAL--- 166 (426)
T ss_pred HHHhcCceEEEeccccccccchhhh----------------hhcc--eeeeeecCCCcEEEEeecCCCceE-EEecc---
Confidence 78889999999999974311 1000 0111 123468899999998754322110 11112
Q ss_pred HHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEe
Q 002660 241 LERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALA 320 (895)
Q Consensus 241 ~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vg 320 (895)
..+++.+|||.++++.|.|..... ...+...|+.++
T Consensus 167 ------------------~p~kvsvIPnAv~~~~f~P~~~~~--------------------------~S~~i~~ivv~s 202 (426)
T KOG1111|consen 167 ------------------APAKVSVIPNAVVTHTFTPDAADK--------------------------PSADIITIVVAS 202 (426)
T ss_pred ------------------CHhHeeeccceeeccccccCcccc--------------------------CCCCeeEEEEEe
Confidence 233999999999999999854221 013347899999
Q ss_pred CCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHH
Q 002660 321 RPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIY 399 (895)
Q Consensus 321 rl~~~Kgi~~ll~A~~~l~~~~~~~~l~-livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly 399 (895)
|+.++||++++++++.++.++ .|++. +|+|+||... .+++..+++.++++|.++|.++.+++.+.|
T Consensus 203 RLvyrKGiDll~~iIp~vc~~--~p~vrfii~GDGPk~i-----------~lee~lEk~~l~~rV~~lG~v~h~~Vr~vl 269 (426)
T KOG1111|consen 203 RLVYRKGIDLLLEIIPSVCDK--HPEVRFIIIGDGPKRI-----------DLEEMLEKLFLQDRVVMLGTVPHDRVRDVL 269 (426)
T ss_pred eeeeccchHHHHHHHHHHHhc--CCCeeEEEecCCcccc-----------hHHHHHHHhhccCceEEecccchHHHHHHH
Confidence 999999999999999999744 45555 4789998643 345677888999999999999999999999
Q ss_pred HHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHH
Q 002660 400 RLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCR 479 (895)
Q Consensus 400 ~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~ 479 (895)
..- |||++||+.|.|+++++||++||+|||+|.+||..|++.+. -+.....+++++++++.++++.-... -
T Consensus 270 ~~G----~IFlntSlTEafc~~ivEAaScGL~VVsTrVGGIpeVLP~d--~i~~~~~~~~dl~~~v~~ai~~~~~~---p 340 (426)
T KOG1111|consen 270 VRG----DIFLNTSLTEAFCMVIVEAASCGLPVVSTRVGGIPEVLPED--MITLGEPGPDDLVGAVEKAITKLRTL---P 340 (426)
T ss_pred hcC----cEEeccHHHHHHHHHHHHHHhCCCEEEEeecCCccccCCcc--ceeccCCChHHHHHHHHHHHHHhccC---c
Confidence 999 99999999999999999999999999999999999998653 34355567889999998888632211 1
Q ss_pred HHHHHHh-hcCCHHHHHHHHHHHHHcccCC
Q 002660 480 QNGLKNI-HLFSWPEHCKTYLSRIAGCKPR 508 (895)
Q Consensus 480 ~~~~~~~-~~~s~~~~a~~~~~~~~~~~~~ 508 (895)
....+.+ +.|+|+..|++-...|.++...
T Consensus 341 ~~~h~~v~~~y~w~dVa~rTekvy~r~~~t 370 (426)
T KOG1111|consen 341 LEFHDRVKKMYSWKDVAERTEKVYDRAATT 370 (426)
T ss_pred hhHHHHHHHhccHHHHHHHHHHHHHHHhhc
Confidence 2233455 4899999999999999988764
No 41
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=100.00 E-value=1e-31 Score=305.74 Aligned_cols=375 Identities=15% Similarity=0.115 Sum_probs=246.8
Q ss_pred CchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCccccc
Q 002660 29 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAK 108 (895)
Q Consensus 29 GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~~~~~ 108 (895)
+|.+..+..+|++|+++| |+|+|+|.....+. .+ .....|+.++.++..+. ...
T Consensus 14 ~~~~~R~~~~a~~L~~~G--~~V~ii~~~~~~~~--------~~-------------~~~~~~v~~~~~~~~~~--~~~- 67 (415)
T cd03816 14 IGRSPRMQYHALSLAKHG--WKVDLVGYLETPPH--------DE-------------ILSNPNITIHPLPPPPQ--RLN- 67 (415)
T ss_pred cCCCHHHHHHHHHHHhcC--ceEEEEEecCCCCC--------HH-------------HhcCCCEEEEECCCCcc--ccc-
Confidence 466778899999999999 99999987532111 00 01124899998876541 000
Q ss_pred ccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEecccc---chhHHHHHhccCCCCEEEEeCCCchhhHHHH
Q 002660 109 ELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYAD---AGDSAALLSGALNVPMLFTGHSLGRDKLEQL 185 (895)
Q Consensus 109 ~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~---~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~ 185 (895)
..+.+..+...++..+..+.+.+.. ..+||+||+|... ...++..+++..++|+|++.|+.+....
T Consensus 68 --~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~~--- 136 (415)
T cd03816 68 --KLPFLLFAPLKVLWQFFSLLWLLYK------LRPADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTIL--- 136 (415)
T ss_pred --cchHHHHHHHHHHHHHHHHHHHHHh------cCCCCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHHH---
Confidence 0111111111111111121111111 1579999998742 2344555677789999999999753221
Q ss_pred HHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEE
Q 002660 186 LKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAI 265 (895)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~v 265 (895)
..+..... ...++..++ |+..++.+|.|+++|+...+.+.+ + |.+..++.+
T Consensus 137 -~~~~~~~~---~~~~~~~~~--e~~~~~~ad~ii~vS~~~~~~l~~-~----------------------~~~~~ki~v 187 (415)
T cd03816 137 -ALKLGENH---PLVRLAKWY--EKLFGRLADYNLCVTKAMKEDLQQ-F----------------------NNWKIRATV 187 (415)
T ss_pred -hcccCCCC---HHHHHHHHH--HHHHhhcCCEeeecCHHHHHHHHh-h----------------------hccCCCeee
Confidence 11110000 112233443 777889999999999987776543 2 122349999
Q ss_pred eCCCCCCCCCCCCCCCCCCC-CCCC--CCCCCCCCCchhHHhhhh-cCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc
Q 002660 266 IPPGMEFHHIVPQDGDMDGE-TEGN--EDNPASPDPPIWSEIMRF-FTNPRKPVILALARPDPKKNITTLVKAFGECRPL 341 (895)
Q Consensus 266 ip~Gid~~~f~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~ 341 (895)
||||. ...|.|........ .... ... .. ....... ...++..+++++||+.+.||++.+|+|+..+.+.
T Consensus 188 I~Ng~-~~~f~p~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~ 260 (415)
T cd03816 188 LYDRP-PEQFRPLPLEEKHELFLKLAKTFL-----TR-ELRIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEKS 260 (415)
T ss_pred cCCCC-HHHceeCcHHHHHHHHHhcccccc-----cc-ccccccceecCCCceEEEEeccccCCCCHHHHHHHHHHHHHh
Confidence 99994 45665532110000 0000 000 00 0000000 1123456788999999999999999999998532
Q ss_pred ----cCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecC---
Q 002660 342 ----RELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPA--- 413 (895)
Q Consensus 342 ----~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps--- 413 (895)
...+++.+ ++|+|+. ..++.++++++++.+.+.+.|+++.++++.+|+.| |++|.|+
T Consensus 261 ~~~~~~~~~i~l~ivG~G~~-----------~~~l~~~~~~~~l~~~~~~~g~~~~~~~~~~l~~a----Dv~v~~~~~~ 325 (415)
T cd03816 261 AATGPKLPKLLCIITGKGPL-----------KEKYLERIKELKLKKVTIRTPWLSAEDYPKLLASA----DLGVSLHTSS 325 (415)
T ss_pred hcccccCCCEEEEEEecCcc-----------HHHHHHHHHHcCCCcEEEEcCcCCHHHHHHHHHhC----CEEEEccccc
Confidence 12345664 7898874 35677888889987667777899999999999999 9998753
Q ss_pred CCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHhhcCC
Q 002660 414 FIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVAD---KQLWARCRQNGLKNIHLFS 490 (895)
Q Consensus 414 ~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~---~~~~~~~~~~~~~~~~~~s 490 (895)
..|++|++++||||||+|||+++.||..|++.++.+|++++ |+++++++|.+++++ ++.+++|+.++++.. .++
T Consensus 326 ~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~-~~~ 402 (415)
T cd03816 326 SGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEES-ELR 402 (415)
T ss_pred cccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh-hcC
Confidence 35789999999999999999999999999999999999994 899999999999999 899999999998887 444
Q ss_pred HHHH
Q 002660 491 WPEH 494 (895)
Q Consensus 491 ~~~~ 494 (895)
|.+-
T Consensus 403 ~~~~ 406 (415)
T cd03816 403 WDEN 406 (415)
T ss_pred HHHH
Confidence 4443
No 42
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=100.00 E-value=1e-31 Score=301.01 Aligned_cols=371 Identities=22% Similarity=0.240 Sum_probs=258.5
Q ss_pred eEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccc
Q 002660 5 NYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 84 (895)
Q Consensus 5 ~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~ 84 (895)
||++++.+.. |..||.++++.+|+++|+++| |+|++++......... .. .
T Consensus 1 kIl~i~~~~~-----------~~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~~------~~-~---------- 50 (375)
T cd03821 1 KILHVIPSFD-----------PKYGGPVRVVLNLSKALAKLG--HEVTVATTDAGGDPLL------VA-L---------- 50 (375)
T ss_pred CeEEEcCCCC-----------cccCCeehHHHHHHHHHHhcC--CcEEEEecCCCCccch------hh-c----------
Confidence 6888875442 789999999999999999999 9999998754221100 00 0
Q ss_pred cCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccc--cchhHHHHH
Q 002660 85 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYA--DAGDSAALL 162 (895)
Q Consensus 85 ~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~--~~~~~~~~~ 162 (895)
.......... .. ..... ..+.. +......+... ...+||+||+|.. .....+...
T Consensus 51 -----~~~~~~~~~~-~~-~~~~~-~~~~~---~~~~~~~~~~~------------~~~~~dii~~~~~~~~~~~~~~~~ 107 (375)
T cd03821 51 -----NGVPVKLFSI-NV-AYGLN-LARYL---FPPSLLAWLRL------------NIREADIVHVHGLWSYPSLAAARA 107 (375)
T ss_pred -----cCceeeeccc-ch-hhhhh-hhhhc---cChhHHHHHHH------------hCCCCCEEEEecccchHHHHHHHH
Confidence 0100000000 00 00000 00000 00001111111 0157999999973 345555666
Q ss_pred hccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHH
Q 002660 163 SGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 242 (895)
Q Consensus 163 ~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~ 242 (895)
++..++|++++.|+........ .. ...+.......++..+..++.+++++..........+
T Consensus 108 ~~~~~~~~i~~~~~~~~~~~~~---~~--------~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~~-------- 168 (375)
T cd03821 108 ARKYGIPYVVSPHGMLDPWALP---HK--------ALKKRLAWFLFERRLLQAAAAVHATSEQEAAEIRRLG-------- 168 (375)
T ss_pred HHHhCCCEEEEccccccccccc---cc--------hhhhHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhhC--------
Confidence 7778999999999875433110 00 0011122223356678899999999976655543322
Q ss_pred HHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCC
Q 002660 243 RKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARP 322 (895)
Q Consensus 243 ~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl 322 (895)
+..++.++|||+|.+.|.+..... .+.......++++++++||+
T Consensus 169 ----------------~~~~~~vi~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~i~~~G~~ 212 (375)
T cd03821 169 ----------------LKAPIAVIPNGVDIPPFAALPSRG--------------------RRRKFPILPDKRIILFLGRL 212 (375)
T ss_pred ----------------CcccEEEcCCCcChhccCcchhhh--------------------hhhhccCCCCCcEEEEEeCc
Confidence 112899999999998886532110 02223345678899999999
Q ss_pred CCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHh
Q 002660 323 DPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLA 402 (895)
Q Consensus 323 ~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A 402 (895)
.+.||++.+++|+..+.+..+...+ +++|.++.. ....+...+.++++.++|.|+|+++.+++..+|+.|
T Consensus 213 ~~~K~~~~li~a~~~l~~~~~~~~l-~i~G~~~~~---------~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a 282 (375)
T cd03821 213 HPKKGLDLLIEAFAKLAERFPDWHL-VIAGPDEGG---------YRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADA 282 (375)
T ss_pred chhcCHHHHHHHHHHhhhhcCCeEE-EEECCCCcc---------hHHHHHHHHHhcCccceEEEcCCCChHHHHHHHhhC
Confidence 9999999999999999743333333 477876432 123444556888999999999999999999999999
Q ss_pred hcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH
Q 002660 403 AKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNG 482 (895)
Q Consensus 403 ~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~ 482 (895)
|++|+||..|+||++++|||+||+|||+++.||..+++.+ ..|+++++ +.++++++|.+++++++.++.+++++
T Consensus 283 ----dv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~i~~l~~~~~~~~~~~~~~ 356 (375)
T cd03821 283 ----DLFVLPSHSENFGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVVDD-DVDALAAALRRALELPQRLKAMGENG 356 (375)
T ss_pred ----CEEEeccccCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEeCC-ChHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988 78888764 56999999999999999999999999
Q ss_pred HHHh-hcCCHHHHHHHHH
Q 002660 483 LKNI-HLFSWPEHCKTYL 499 (895)
Q Consensus 483 ~~~~-~~~s~~~~a~~~~ 499 (895)
++.+ ++|||+..+++++
T Consensus 357 ~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 357 RALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHHHHHhcCHHHHHHHhh
Confidence 9997 7999999999886
No 43
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=100.00 E-value=6.6e-33 Score=290.24 Aligned_cols=245 Identities=22% Similarity=0.381 Sum_probs=181.2
Q ss_pred CeEEEEEecCCCCcchhHHHHHHHHHHH-hhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeeccC
Q 002660 612 KHIFVISVDCDSTTGLLDATKKICEAVE-KERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTL 690 (895)
Q Consensus 612 ~kli~~DiDGTL~~~~~~~~~~~l~~l~-~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~~ 690 (895)
++||++|+||||.......+.++.+.++ .. .+++.|+++|||++.++.+++++.+++ .||++||++|+.||+..
T Consensus 2 ~~ll~sDlD~Tl~~~~~~~~~~l~~~l~~~~--~~~~~~v~~TGRs~~~~~~~~~~~~l~--~Pd~~I~svGt~I~~~~- 76 (247)
T PF05116_consen 2 PRLLASDLDGTLIDGDDEALARLEELLEQQA--RPEILFVYVTGRSLESVLRLLREYNLP--QPDYIITSVGTEIYYGE- 76 (247)
T ss_dssp SEEEEEETBTTTBHCHHHHHHHHHHHHHHHH--CCGEEEEEE-SS-HHHHHHHHHHCT-E--E-SEEEETTTTEEEESS-
T ss_pred CEEEEEECCCCCcCCCHHHHHHHHHHHHHhh--CCCceEEEECCCCHHHHHHHHHhCCCC--CCCEEEecCCeEEEEcC-
Confidence 6899999999997333344444444444 22 258999999999999999999999984 58999999999999953
Q ss_pred CCCCCCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEEEeeCCCCCccHHHHHHH
Q 002660 691 NSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKV 770 (895)
Q Consensus 691 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~ 770 (895)
.+..+..|..++...|..+.+.+++..+++...+.. ..+..+|++|++........++++++.
T Consensus 77 -----~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~l~~q~~------------~~q~~~k~sy~~~~~~~~~~~~~i~~~ 139 (247)
T PF05116_consen 77 -----NWQPDEEWQAHIDERWDRERVEEILAELPGLRPQPE------------SEQRPFKISYYVDPDDSADILEEIRAR 139 (247)
T ss_dssp -----TTEE-HHHHHHHHTT--HHHHHHHHHCHCCEEEGGC------------CCGCCTCECEEEETTSHCHHHHHHHHH
T ss_pred -----CCcChHHHHHHHHhcCChHHHHHHHHHhhCcccCCc------------cccCCeeEEEEEecccchhHHHHHHHH
Confidence 566788999999999999889988888876544432 346678999998655444447889999
Q ss_pred HHhccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEecCccccccc
Q 002660 771 LRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSN 850 (895)
Q Consensus 771 l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgNa~~~~~~ 850 (895)
+...+..+++++|++. ++||+|+++|||.||++|+++|+++++++++ +||+.| | ++||..+..||+||||.++...
T Consensus 140 l~~~~l~~~~i~s~~~-~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~-aGDSgN-D-~~mL~~~~~~vvV~Na~~e~~~ 215 (247)
T PF05116_consen 140 LRQRGLRVNVIYSNGR-DLDILPKGASKGAALRYLMERWGIPPEQVLV-AGDSGN-D-LEMLEGGDHGVVVGNAQPELLS 215 (247)
T ss_dssp HHCCTCEEEEEECTCC-EEEEEETT-SHHHHHHHHHHHHT--GGGEEE-EESSGG-G-HHHHCCSSEEEE-TTS-HHHHH
T ss_pred HHHcCCCeeEEEccce-eEEEccCCCCHHHHHHHHHHHhCCCHHHEEE-EeCCCC-c-HHHHcCcCCEEEEcCCCHHHHH
Confidence 9988999999999885 9999999999999999999999999999999 788888 8 9999999999999999944100
Q ss_pred cccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHHHhCc
Q 002660 851 QIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGL 892 (895)
Q Consensus 851 ~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~~l 892 (895)
...... ....-.|++.....+||.+||+||||
T Consensus 216 ~~~~~~----------~~~~~iy~a~~~~a~GIlegl~~~~~ 247 (247)
T PF05116_consen 216 WLLEKL----------RQQERIYFAQGPYAAGILEGLQHFGF 247 (247)
T ss_dssp HHHHCC-----------TTE--EE-SS-THHHHHHHHHHTTT
T ss_pred HHHHhc----------ccCCceEecCCCCcHHHHHHHHHcCC
Confidence 000000 01223466788899999999999996
No 44
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=100.00 E-value=3e-31 Score=297.38 Aligned_cols=371 Identities=22% Similarity=0.282 Sum_probs=264.2
Q ss_pred eEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccc
Q 002660 5 NYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 84 (895)
Q Consensus 5 ~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~ 84 (895)
||++++... .|+.||.+.++.+++++|+++| |+|+++|.......... .
T Consensus 1 kil~~~~~~-----------~p~~~G~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~~~-------~----------- 49 (374)
T cd03817 1 KIGIFTDTY-----------LPQVNGVATSIRRLAEELEKRG--HEVYVVAPSYPGAPEEE-------E----------- 49 (374)
T ss_pred CeeEeehhc-----------cCCCCCeehHHHHHHHHHHHcC--CeEEEEeCCCCCCCccc-------c-----------
Confidence 688887443 3889999999999999999999 99999987643211100 0
Q ss_pred cCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccc-cchhHHHHHh
Q 002660 85 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYA-DAGDSAALLS 163 (895)
Q Consensus 85 ~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~-~~~~~~~~~~ 163 (895)
..+......... ...+ ..+.. .+...+...+. ..+||+||+|.. ..+..+..++
T Consensus 50 ----~~~~~~~~~~~~----~~~~-~~~~~--~~~~~~~~~~~--------------~~~~Div~~~~~~~~~~~~~~~~ 104 (374)
T cd03817 50 ----VVVVRPFRVPTF----KYPD-FRLPL--PIPRALIIILK--------------ELGPDIVHTHTPFSLGLLGLRVA 104 (374)
T ss_pred ----cccccccccccc----hhhh-hhccc--cHHHHHHHHHh--------------hcCCCEEEECCchhhhhHHHHHH
Confidence 001111111000 0000 01100 11111111111 167999999975 4556677788
Q ss_pred ccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHH
Q 002660 164 GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 243 (895)
Q Consensus 164 ~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~ 243 (895)
+..++|++++.|+.+....... ....... . .... ...++..++.+|.++++|+...+.+....
T Consensus 105 ~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~-----~-~~~~-~~~~~~~~~~~d~i~~~s~~~~~~~~~~~--------- 167 (374)
T cd03817 105 RKLGIPVVATYHTMYEDYTHYV-PLGRLLA-----R-AVVR-RKLSRRFYNRCDAVIAPSEKIADLLREYG--------- 167 (374)
T ss_pred HHcCCCEEEEecCCHHHHHHHH-hcccchh-----H-HHHH-HHHHHHHhhhCCEEEeccHHHHHHHHhcC---------
Confidence 8899999999999866432221 1111000 0 0111 02366789999999999997665543321
Q ss_pred HHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCC
Q 002660 244 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD 323 (895)
Q Consensus 244 ~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~ 323 (895)
.. .++.++|+|+|...+.+.... ..+..+....+++.|+++|++.
T Consensus 168 --------------~~-~~~~vi~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~i~~~G~~~ 212 (374)
T cd03817 168 --------------VK-RPIEVIPTGIDLDRFEPVDGD--------------------DERRKLGIPEDEPVLLYVGRLA 212 (374)
T ss_pred --------------CC-CceEEcCCccchhccCccchh--------------------HHHHhcCCCCCCeEEEEEeeee
Confidence 11 168999999999887653211 0122333456678999999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHh
Q 002660 324 PKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLA 402 (895)
Q Consensus 324 ~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A 402 (895)
+.||++.+++++..+.+. .+++.+ ++|+++. ...+...++++++.++|.|+|.++.+++..+|+.|
T Consensus 213 ~~k~~~~l~~~~~~~~~~--~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a 279 (374)
T cd03817 213 KEKNIDFLIRAFARLLKE--EPDVKLVIVGDGPE-----------REELEELARELGLADRVIFTGFVPREELPDYYKAA 279 (374)
T ss_pred cccCHHHHHHHHHHHHHh--CCCeEEEEEeCCch-----------HHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHc
Confidence 999999999999998643 344554 6787653 34566777788888999999999999999999999
Q ss_pred hcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH
Q 002660 403 AKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNG 482 (895)
Q Consensus 403 ~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~ 482 (895)
|++++|+..|++|++++|||+||+|||+++.|+..+++.++.+|+++++.+. +++++|.+++++++.++++++++
T Consensus 280 ----d~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~~~~~~~~~~~ 354 (374)
T cd03817 280 ----DLFVFASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLLQDPELRRRLSKNA 354 (374)
T ss_pred ----CEEEecccccCcChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHHhChHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998887 99999999999999999999999
Q ss_pred HHHhhcCCHHHHHHHHHHHHHc
Q 002660 483 LKNIHLFSWPEHCKTYLSRIAG 504 (895)
Q Consensus 483 ~~~~~~~s~~~~a~~~~~~~~~ 504 (895)
++.+++++ +++++.++|++
T Consensus 355 ~~~~~~~~---~~~~~~~~~~~ 373 (374)
T cd03817 355 EESAEKFS---FAKKVEKLYEE 373 (374)
T ss_pred HHHHHHHH---HHHHHHHHHhc
Confidence 99997665 66666666654
No 45
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=100.00 E-value=1.6e-31 Score=301.07 Aligned_cols=385 Identities=20% Similarity=0.256 Sum_probs=270.4
Q ss_pred eEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccc
Q 002660 5 NYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 84 (895)
Q Consensus 5 ~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~ 84 (895)
||++|+.+.. |+.||.+.++..++++|+++| |+|++++.....+.........
T Consensus 1 kIl~i~~~~~-----------~~~~G~~~~~~~l~~~L~~~g--~~v~~~~~~~~~~~~~~~~~~~-------------- 53 (394)
T cd03794 1 KILILSQYFP-----------PELGGGAFRTTELAEELVKRG--HEVTVITGSPNYPSGKIYKGYK-------------- 53 (394)
T ss_pred CEEEEecccC-----------CccCCcceeHHHHHHHHHhCC--ceEEEEecCCCcccccccccce--------------
Confidence 6899985553 566999999999999999999 9999998764322211000000
Q ss_pred cCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccc--cchhHHHHH
Q 002660 85 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYA--DAGDSAALL 162 (895)
Q Consensus 85 ~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~--~~~~~~~~~ 162 (895)
....+++++++++..... . . ..+..+..+.. +.......+.. +..+||+||++.+ .....+..+
T Consensus 54 -~~~~~~~~~~~~~~~~~~-~--~-~~~~~~~~~~~----~~~~~~~~~~~-----~~~~~D~v~~~~~~~~~~~~~~~~ 119 (394)
T cd03794 54 -REEVDGVRVHRVPLPPYK-K--N-GLLKRLLNYLS----FALSALLALLK-----RRRRPDVIIATSPPLLIALAALLL 119 (394)
T ss_pred -EEecCCeEEEEEecCCCC-c--c-chHHHHHhhhH----HHHHHHHHHHh-----cccCCCEEEEcCChHHHHHHHHHH
Confidence 011247888887754331 0 0 00000111111 11111111110 1267999999973 455566667
Q ss_pred hccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHH
Q 002660 163 SGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 242 (895)
Q Consensus 163 ~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~ 242 (895)
++..++|++++.|+.++....... ..... ...+++..++ ++..++.+|.++++|+...+.+. .+
T Consensus 120 ~~~~~~~~i~~~h~~~~~~~~~~~---~~~~~--~~~~~~~~~~--~~~~~~~~d~vi~~s~~~~~~~~-~~-------- 183 (394)
T cd03794 120 ARLKGAPFVLEVRDLWPESAVALG---LLKNG--SLLYRLLRKL--ERLIYRRADAIVVISPGMREYLV-RR-------- 183 (394)
T ss_pred HHhcCCCEEEEehhhcchhHHHcc---Ccccc--chHHHHHHHH--HHHHHhcCCEEEEECHHHHHHHH-hc--------
Confidence 777799999999998765432211 11110 0011233333 66789999999999998777653 11
Q ss_pred HHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCC
Q 002660 243 RKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARP 322 (895)
Q Consensus 243 ~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl 322 (895)
+.+..++.++|||+|...+.+..... .+.+.....+++.++++|++
T Consensus 184 --------------~~~~~~~~~i~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~i~~~G~~ 229 (394)
T cd03794 184 --------------GVPPEKISVIPNGVDLELFKPPPADE--------------------SLRKELGLDDKFVVLYAGNI 229 (394)
T ss_pred --------------CCCcCceEEcCCCCCHHHcCCccchh--------------------hhhhccCCCCcEEEEEecCc
Confidence 12223899999999988776533110 01222234567899999999
Q ss_pred CCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHH
Q 002660 323 DPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRL 401 (895)
Q Consensus 323 ~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~ 401 (895)
.+.||++.+++|+..+.+. +++.+ ++|.++.. ..+...+...++ ++|.|.|+++.+++.++|+.
T Consensus 230 ~~~k~~~~l~~~~~~l~~~---~~~~l~i~G~~~~~-----------~~~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~ 294 (394)
T cd03794 230 GRAQGLDTLLEAAALLKDR---PDIRFLIVGDGPEK-----------EELKELAKALGL-DNVTFLGRVPKEELPELLAA 294 (394)
T ss_pred ccccCHHHHHHHHHHHhhc---CCeEEEEeCCcccH-----------HHHHHHHHHcCC-CcEEEeCCCChHHHHHHHHh
Confidence 9999999999999999643 44444 77877642 333444444454 67999999999999999999
Q ss_pred hhcCCcEEEecCCCCCC-----chHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHH
Q 002660 402 AAKTKGVFINPAFIEPF-----GLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWA 476 (895)
Q Consensus 402 A~~~~dv~v~ps~~Eg~-----gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~ 476 (895)
| |++++|+..|++ |++++|||+||+|||+++.++..+++.++.+|++++++|+++++++|.+++++++.++
T Consensus 295 ~----di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~ 370 (394)
T cd03794 295 A----DVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDDPEERA 370 (394)
T ss_pred h----CeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHHhChHHHH
Confidence 9 999999998876 7889999999999999999999999988889999999999999999999999999999
Q ss_pred HHHHHHHHHhh-cCCHHHHHHHHH
Q 002660 477 RCRQNGLKNIH-LFSWPEHCKTYL 499 (895)
Q Consensus 477 ~~~~~~~~~~~-~~s~~~~a~~~~ 499 (895)
++++++++.+. +|||+.++++|+
T Consensus 371 ~~~~~~~~~~~~~~s~~~~~~~~~ 394 (394)
T cd03794 371 EMGENGRRYVEEKFSREKLAERLL 394 (394)
T ss_pred HHHHHHHHHHHHhhcHHHHHHhcC
Confidence 99999999995 999999998863
No 46
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=100.00 E-value=1e-31 Score=300.87 Aligned_cols=363 Identities=22% Similarity=0.319 Sum_probs=258.5
Q ss_pred eEeeeecccccccCcccCCCCC-CCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCccc
Q 002660 5 NYFACSIHGLIRGENMELGRDS-DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 83 (895)
Q Consensus 5 ~I~~is~~~~~~~~~~~~~~~~-~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~ 83 (895)
||++++.+.. + ..||+++|+.+|+++|+++| |+|++++.............
T Consensus 1 ~ili~~~~~~-----------~~~~gG~~~~~~~l~~~L~~~~--~~v~~~~~~~~~~~~~~~~~--------------- 52 (365)
T cd03809 1 RILIDARFLA-----------SRRPTGIGRYARELLRALLKLD--PEEVLLLLPGAPGLLLLPLR--------------- 52 (365)
T ss_pred CEEEechhhh-----------cCCCCcHHHHHHHHHHHHHhcC--CceEEEEecCccccccccch---------------
Confidence 5777764443 4 78999999999999999999 99999987643221110000
Q ss_pred ccCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHh
Q 002660 84 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLS 163 (895)
Q Consensus 84 ~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~ 163 (895)
..... ... ......+.....+......... ..+||+||+++......
T Consensus 53 ------~~~~~--~~~------~~~~~~~~~~~~~~~~~~~~~~--------------~~~~Dii~~~~~~~~~~----- 99 (365)
T cd03809 53 ------AALRL--LLR------LPRRLLWGLLFLLRAGDRLLLL--------------LLGLDLLHSPHNTAPLL----- 99 (365)
T ss_pred ------hcccc--ccc------cccccccchhhHHHHHHHHHhh--------------hcCCCeeeecccccCcc-----
Confidence 00000 000 0001111111111111111111 15799999998754433
Q ss_pred ccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHH
Q 002660 164 GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 243 (895)
Q Consensus 164 ~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~ 243 (895)
+..++|+++++|+..+......... . .....+. .++..++.+|.++++|+...+.+.+.+.. .+.
T Consensus 100 ~~~~~~~i~~~hd~~~~~~~~~~~~-----~----~~~~~~~--~~~~~~~~~d~~i~~s~~~~~~~~~~~~~-~~~--- 164 (365)
T cd03809 100 RLRGVPVVVTIHDLIPLRFPEYFSP-----G----FRRYFRR--LLRRALRRADAIITVSEATKRDLLRYLGV-PPD--- 164 (365)
T ss_pred cCCCCCEEEEeccchhhhCcccCCH-----H----HHHHHHH--HHHHHHHHcCEEEEccHHHHHHHHHHhCc-CHH---
Confidence 5679999999999865442221110 0 1112222 25668999999999999888877666542 222
Q ss_pred HHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCC
Q 002660 244 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD 323 (895)
Q Consensus 244 ~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~ 323 (895)
++.++|||+|...+.+.... . ........+++.|+++||+.
T Consensus 165 ------------------~~~vi~~~~~~~~~~~~~~~--------------------~-~~~~~~~~~~~~i~~~G~~~ 205 (365)
T cd03809 165 ------------------KIVVIPLGVDPRFRPPPAEA--------------------E-VLRALYLLPRPYFLYVGTIE 205 (365)
T ss_pred ------------------HEEeeccccCccccCCCchH--------------------H-HHHHhcCCCCCeEEEeCCCc
Confidence 89999999999877643200 0 11223346788999999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhh
Q 002660 324 PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAA 403 (895)
Q Consensus 324 ~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~ 403 (895)
+.||++.+++++..+.+..+...+ +++|.+..... .....+.+.++.++|.++|+++.+++..+|+.|
T Consensus 206 ~~K~~~~~l~~~~~~~~~~~~~~l-~i~G~~~~~~~----------~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~- 273 (365)
T cd03809 206 PRKNLERLLEAFARLPAKGPDPKL-VIVGKRGWLNE----------ELLARLRELGLGDRVRFLGYVSDEELAALYRGA- 273 (365)
T ss_pred cccCHHHHHHHHHHHHHhcCCCCE-EEecCCccccH----------HHHHHHHHcCCCCeEEECCCCChhHHHHHHhhh-
Confidence 999999999999999754433344 46676543221 122233567888999999999999999999999
Q ss_pred cCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 002660 404 KTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGL 483 (895)
Q Consensus 404 ~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~ 483 (895)
|++++||..|++|++++|||++|+|||+++.|+..|++. .+|+++++.|.++++++|.+++.+++.+..++++++
T Consensus 274 ---d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~ 348 (365)
T cd03809 274 ---RAFVFPSLYEGFGLPVLEAMACGTPVIASNISSLPEVAG--DAALYFDPLDPEALAAAIERLLEDPALREELRERGL 348 (365)
T ss_pred ---hhhcccchhccCCCCHHHHhcCCCcEEecCCCCccceec--CceeeeCCCCHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999874 578999999999999999999999999999999999
Q ss_pred HHhhcCCHHHHHHHHH
Q 002660 484 KNIHLFSWPEHCKTYL 499 (895)
Q Consensus 484 ~~~~~~s~~~~a~~~~ 499 (895)
+.+++|||+.++++++
T Consensus 349 ~~~~~~sw~~~~~~~~ 364 (365)
T cd03809 349 ARAKRFSWEKTARRTL 364 (365)
T ss_pred HHHHhCCHHHHHHHHh
Confidence 7778999999999886
No 47
>PRK10125 putative glycosyl transferase; Provisional
Probab=100.00 E-value=1.6e-31 Score=301.49 Aligned_cols=369 Identities=12% Similarity=0.083 Sum_probs=228.8
Q ss_pred eeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCccc
Q 002660 4 NNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 83 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~ 83 (895)
|||++|.. + -..||+++.+.+|++.|.++| |+|.++......+....
T Consensus 1 mkil~i~~-~------------l~~GGaeri~~~L~~~l~~~G--~~~~i~~~~~~~~~~~~------------------ 47 (405)
T PRK10125 1 MNILQFNV-R------------LAEGGAAGVALDLHQRALQQG--LASHFVYGYGKGGKESV------------------ 47 (405)
T ss_pred CeEEEEEe-e------------ecCCchhHHHHHHHHHHHhcC--CeEEEEEecCCCccccc------------------
Confidence 79999973 2 246899999999999999999 99999887643222100
Q ss_pred ccCCCCCCe-EEEecCCCCCCcccccccCCCChHHHH-HHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHH
Q 002660 84 DDMGESSGA-YIIRIPFGPKDKYIAKELLWPHIPEFV-DGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAAL 161 (895)
Q Consensus 84 ~~~~~~~gv-~i~~i~~~~~~~~~~~~~~~~~l~~f~-~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~ 161 (895)
....+ .++.+..... .++... +.++. ...+.......+.+.+ ..+|||||.|....+++...
T Consensus 48 ----~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~------~~~pDviHlH~~~~~~~~~~ 111 (405)
T PRK10125 48 ----SHQNYPQVIKHTPRMT-AMANIA-----LFRLFNRDLFGNFNELYRTITR------TPGPVVLHFHVLHSYWLNLK 111 (405)
T ss_pred ----ccCCcceEEEecccHH-HHHHHH-----HHHhcchhhcchHHHHHHHHhh------ccCCCEEEEecccCceecHH
Confidence 00111 1111111000 000000 00000 0000111111111211 27899999998754322111
Q ss_pred ---------HhccCCCCEEEEeCCCchhh---HH-H---HHHHhh--------ccHHHHHhh-hhhhHHHHHHHhhhccc
Q 002660 162 ---------LSGALNVPMLFTGHSLGRDK---LE-Q---LLKQAR--------LSRDEINAT-YKIMRRIEAEELSLDAS 216 (895)
Q Consensus 162 ---------~~~~~~ip~v~t~H~~~~~~---~~-~---~~~~~~--------~~~~~~~~~-~~~~~~~~~e~~~l~~a 216 (895)
..+..++|+|+|+||.|... .. . -...+. .+....... ..+.++...-+..++.+
T Consensus 112 ~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~~Cp~l~~~~~~~~d~~~~~~~~k~~~~~~~~~~~ 191 (405)
T PRK10125 112 SVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKVDRAHQLVAGKRQLFREMLALG 191 (405)
T ss_pred HHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCCCCCCccCCCCCccchHHHHHHHHHHHHHHHhhcC
Confidence 12455799999999988531 00 0 000000 000000000 00111111122335567
Q ss_pred CEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 002660 217 EIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASP 296 (895)
Q Consensus 217 d~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~ 296 (895)
+.+|++|++..+.+...+.. .++.+||||||++.+.+.....
T Consensus 192 ~~iV~~S~~l~~~~~~~~~~------------------------~~i~vI~NGid~~~~~~~~~~~-------------- 233 (405)
T PRK10125 192 CQFISPSQHVADAFNSLYGP------------------------GRCRIINNGIDMATEAILAELP-------------- 233 (405)
T ss_pred cEEEEcCHHHHHHHHHHcCC------------------------CCEEEeCCCcCccccccccccc--------------
Confidence 89999999888765443321 2899999999975433211000
Q ss_pred CCchhHHhhhhcCCCCCcEEEEEeC-C-CCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCccccccchHHHHHHHHH
Q 002660 297 DPPIWSEIMRFFTNPRKPVILALAR-P-DPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLK 373 (895)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~il~vgr-l-~~~Kgi~~ll~A~~~l~~~~~~~~l~-livG~~~~~~~~~~~~~~~~~~l~~ 373 (895)
.....+++++|+++|+ + .+.||++.+++|+..+. + ++. +++|+++...
T Consensus 234 ---------~~~~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~---~--~~~L~ivG~g~~~~--------------- 284 (405)
T PRK10125 234 ---------PVRETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG---D--KIELHTFGKFSPFT--------------- 284 (405)
T ss_pred ---------ccccCCCCCEEEEEEeccccCCccHHHHHHHHHhCC---C--CeEEEEEcCCCccc---------------
Confidence 0001246788999999 4 47899999999999873 2 344 4778764210
Q ss_pred HHHhcCCCCcEEeCCCCC-CCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEE
Q 002660 374 LIDKYDLYGQVAYPKHHK-QSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLL 452 (895)
Q Consensus 374 ~~~~~~l~~~v~~~g~~~-~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~l 452 (895)
...+.++|+.. .+++.++|+.| |+||+||..|+||++++||||||+|||+|+.||.+|++.+. +|++
T Consensus 285 -------~~~v~~~g~~~~~~~l~~~y~~a----DvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~~-~G~l 352 (405)
T PRK10125 285 -------AGNVVNHGFETDKRKLMSALNQM----DALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKS-GGKT 352 (405)
T ss_pred -------ccceEEecCcCCHHHHHHHHHhC----CEEEECCccccCcCHHHHHHHcCCCEEEeCCCChHHhEeCC-cEEE
Confidence 13577788753 46899999999 99999999999999999999999999999999999999764 8999
Q ss_pred eCCCCHHHHHHHHHHHHhCHHHHHH----HHHHHHHHh-hcCCHHHHHHHHHHHHHcc
Q 002660 453 VDPHDQQSVADALLKLVADKQLWAR----CRQNGLKNI-HLFSWPEHCKTYLSRIAGC 505 (895)
Q Consensus 453 v~p~d~~~la~ai~~ll~~~~~~~~----~~~~~~~~~-~~~s~~~~a~~~~~~~~~~ 505 (895)
++|.|++++|+++ +++..++ +..++++.+ ++|||+.++++|+++|+++
T Consensus 353 v~~~d~~~La~~~-----~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~l 405 (405)
T PRK10125 353 VSEEEVLQLAQLS-----KPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL 405 (405)
T ss_pred ECCCCHHHHHhcc-----CHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 9999999999864 3333322 234577777 6899999999999999863
No 48
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=100.00 E-value=4.4e-31 Score=295.86 Aligned_cols=356 Identities=21% Similarity=0.230 Sum_probs=250.8
Q ss_pred eEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccc
Q 002660 5 NYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 84 (895)
Q Consensus 5 ~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~ 84 (895)
||++|+.+. |..||.++++.+|+++|+++| |+|++++.....+.... ..
T Consensus 1 kI~~v~~~~------------~~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~~~--------~~--------- 49 (366)
T cd03822 1 RIALVSPYP------------PRKCGIATFTTDLVNALSARG--PDVLVVSVAALYPSLLY--------GG--------- 49 (366)
T ss_pred CeEEecCCC------------CCCCcHHHHHHHHHHHhhhcC--CeEEEEEeecccCcccC--------CC---------
Confidence 688887432 668999999999999999999 99999986532211100 00
Q ss_pred cCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEecccc---chhHH--
Q 002660 85 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYAD---AGDSA-- 159 (895)
Q Consensus 85 ~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~---~~~~~-- 159 (895)
......... . ........+...+.. .+||+||++.+. .....
T Consensus 50 ---~~~~~~~~~-~---------------~~~~~~~~~~~~~~~--------------~~~dii~~~~~~~~~~~~~~~~ 96 (366)
T cd03822 50 ---EQEVVRVIV-L---------------DNPLDYRRAARAIRL--------------SGPDVVVIQHEYGIFGGEAGLY 96 (366)
T ss_pred ---cccceeeee-c---------------CCchhHHHHHHHHhh--------------cCCCEEEEeeccccccchhhHH
Confidence 000111100 0 000011112222222 679999998741 12222
Q ss_pred -HHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCC
Q 002660 160 -ALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFD 238 (895)
Q Consensus 160 -~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~ 238 (895)
....+..++|+|++.|+..... .. ....+ .++..++.+|.|+++|............
T Consensus 97 ~~~~~~~~~~~~i~~~h~~~~~~----------~~-------~~~~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~~--- 154 (366)
T cd03822 97 LLLLLRGLGIPVVVTLHTVLLHE----------PR-------PGDRA--LLRLLLRRADAVIVMSSELLRALLLRAY--- 154 (366)
T ss_pred HHHHHhhcCCCEEEEEecCCccc----------cc-------hhhhH--HHHHHHhcCCEEEEeeHHHHHHHHhhcC---
Confidence 2223447999999999971111 00 00111 2445688999999997444443322211
Q ss_pred hHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEE
Q 002660 239 PVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILA 318 (895)
Q Consensus 239 ~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~ 318 (895)
+ .++.++|||+|...+.+... ..+.....++++|++
T Consensus 155 ~---------------------~~~~~i~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~i~~ 190 (366)
T cd03822 155 P---------------------EKIAVIPHGVPDPPAEPPES-----------------------LKALGGLDGRPVLLT 190 (366)
T ss_pred C---------------------CcEEEeCCCCcCcccCCchh-----------------------hHhhcCCCCCeEEEE
Confidence 1 28999999999877654210 012223456789999
Q ss_pred EeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCC-CCCCCHH
Q 002660 319 LARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKH-HKQSDVP 396 (895)
Q Consensus 319 vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~-~~~~el~ 396 (895)
+|++.+.||++.+++|+..+.+. .+++.+ ++|.+....... .....+++.++++.++|.|+|. ++.+++.
T Consensus 191 ~G~~~~~K~~~~ll~a~~~~~~~--~~~~~l~i~G~~~~~~~~~------~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~ 262 (366)
T cd03822 191 FGLLRPYKGLELLLEALPLLVAK--HPDVRLLVAGETHPDLERY------RGEAYALAERLGLADRVIFINRYLPDEELP 262 (366)
T ss_pred EeeccCCCCHHHHHHHHHHHHhh--CCCeEEEEeccCccchhhh------hhhhHhHHHhcCCCCcEEEecCcCCHHHHH
Confidence 99999999999999999998643 344554 778765322110 1111144778899999999987 9999999
Q ss_pred HHHHHhhcCCcEEEecCCCC--CCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHH
Q 002660 397 EIYRLAAKTKGVFINPAFIE--PFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQL 474 (895)
Q Consensus 397 ~ly~~A~~~~dv~v~ps~~E--g~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~ 474 (895)
.+|+.| |++++||..| ++|++++|||+||+|||+++.|+ .+.+.+..+|+++++.|+++++++|.+++++++.
T Consensus 263 ~~~~~a----d~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~~~~~~ 337 (366)
T cd03822 263 ELFSAA----DVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLLADPEL 337 (366)
T ss_pred HHHhhc----CEEEecccccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHHcChHH
Confidence 999999 9999999999 99999999999999999999999 6777778899999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 002660 475 WARCRQNGLKNIHLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 475 ~~~~~~~~~~~~~~~s~~~~a~~~~~~~~ 503 (895)
+.++++++++.+++|||+.++++|.++|+
T Consensus 338 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 366 (366)
T cd03822 338 AQALRARAREYARAMSWERVAERYLRLLA 366 (366)
T ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHhC
Confidence 99999999999977999999999999873
No 49
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=100.00 E-value=2e-31 Score=298.45 Aligned_cols=335 Identities=19% Similarity=0.215 Sum_probs=242.3
Q ss_pred CCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCccc
Q 002660 27 DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYI 106 (895)
Q Consensus 27 ~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~~~ 106 (895)
..||.++++.+++++|+++| |+|++++....... +.... ...++.+.+++....
T Consensus 10 ~~GG~~~~~~~l~~~L~~~~--~~v~~i~~~~~~~~----~~~~~----------------~~~~~~~~~~~~~~~---- 63 (358)
T cd03812 10 NRGGIETFIMNYYRNLDRSK--IQFDFLVTSKEEGD----YDDEI----------------EKLGGKIYYIPARKK---- 63 (358)
T ss_pred CCccHHHHHHHHHHhcCccc--eEEEEEEeCCCCcc----hHHHH----------------HHcCCeEEEecCCCc----
Confidence 57899999999999999999 99999997532110 11111 013666666443211
Q ss_pred ccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhccCCCCE-EEEeCCCchhhHHHH
Q 002660 107 AKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPM-LFTGHSLGRDKLEQL 185 (895)
Q Consensus 107 ~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~~~~ip~-v~t~H~~~~~~~~~~ 185 (895)
....+...+...+.+ .+||+||+|......++..+++..+.|. +++.|+........
T Consensus 64 -------~~~~~~~~~~~~~~~--------------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~- 121 (358)
T cd03812 64 -------NPLKYFKKLYKLIKK--------------NKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKK- 121 (358)
T ss_pred -------cHHHHHHHHHHHHhc--------------CCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEecccccccccc-
Confidence 111222222222211 6799999999866666666666677775 66788764332100
Q ss_pred HHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEE
Q 002660 186 LKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAI 265 (895)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~v 265 (895)
.. .... ...++..++.++.++++|....+.+... ... .++.+
T Consensus 122 ------~~-----~~~~---~~~~~~~~~~~~~~i~~s~~~~~~~~~~---~~~---------------------~~~~v 163 (358)
T cd03812 122 ------KK-----ILKY---KVLRKLINRLATDYLACSEEAGKWLFGK---VKN---------------------KKFKV 163 (358)
T ss_pred ------ch-----hhHH---HHHHHHHHhcCCEEEEcCHHHHHHHHhC---CCc---------------------ccEEE
Confidence 00 0000 1124457889999999999877766443 111 28999
Q ss_pred eCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC
Q 002660 266 IPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELA 345 (895)
Q Consensus 266 ip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~ 345 (895)
||||+|.+.|.+.... ...+.......++++|+++||+.+.||++.+++|+..+.+.. +
T Consensus 164 i~ngvd~~~~~~~~~~-------------------~~~~~~~~~~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~--~ 222 (358)
T cd03812 164 IPNGIDLEKFIFNEEI-------------------RKKRRELGILEDKFVIGHVGRFSEQKNHEFLIEIFAELLKKN--P 222 (358)
T ss_pred EeccCcHHHcCCCchh-------------------hhHHHHcCCCCCCEEEEEEeccccccChHHHHHHHHHHHHhC--C
Confidence 9999999887653211 011233444567889999999999999999999999997544 4
Q ss_pred cEE-EEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHH
Q 002660 346 NLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIE 424 (895)
Q Consensus 346 ~l~-livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~E 424 (895)
++. +++|+++. ...+...++++++.++|.|+|+ .+++.++|+.| |++|+||..|+||++++|
T Consensus 223 ~~~l~ivG~g~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a----di~v~ps~~E~~~~~~lE 285 (358)
T cd03812 223 NAKLLLVGDGEL-----------EEEIKKKVKELGLEDKVIFLGV--RNDVPELLQAM----DVFLFPSLYEGLPLVLIE 285 (358)
T ss_pred CeEEEEEeCCch-----------HHHHHHHHHhcCCCCcEEEecc--cCCHHHHHHhc----CEEEecccccCCCHHHHH
Confidence 454 47898764 3456677788899999999998 78999999999 999999999999999999
Q ss_pred HHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh
Q 002660 425 AAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI 486 (895)
Q Consensus 425 a~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~ 486 (895)
|||||+|||+|+.||..+++.+ ..+++..++++++++++|.+++++|+.++.++..+....
T Consensus 286 Ama~G~PvI~s~~~~~~~~i~~-~~~~~~~~~~~~~~a~~i~~l~~~~~~~~~~~~~~~~~~ 346 (358)
T cd03812 286 AQASGLPCILSDTITKEVDLTD-LVKFLSLDESPEIWAEEILKLKSEDRRERSSESIKKKGL 346 (358)
T ss_pred HHHhCCCEEEEcCCchhhhhcc-CccEEeCCCCHHHHHHHHHHHHhCcchhhhhhhhhhccc
Confidence 9999999999999999999988 566777777889999999999999998888877776655
No 50
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=1.5e-31 Score=303.69 Aligned_cols=284 Identities=19% Similarity=0.185 Sum_probs=205.1
Q ss_pred CCCcEEEeccccchhHHHHHh-ccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHh-hhhhhHHHHHHHhhhcccCEEE
Q 002660 143 VWPVAIHGHYADAGDSAALLS-GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINA-TYKIMRRIEAEELSLDASEIVI 220 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~-~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~~l~~ad~vi 220 (895)
.++|+||++....+ .++. +..++|+|++.|+.....+..+..........+.. ..+... ..|+..++.+|.|+
T Consensus 103 ~~~D~v~~~~~~~~---~~~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~e~~~~~~ad~vi 177 (397)
T TIGR03087 103 EPVDAIVVFSSAMA---QYVTPHVRGVPRIVDFVDVDSDKWLQYARTKRWPLRWIYRREGRLLL--AYERAIAARFDAAT 177 (397)
T ss_pred CCCCEEEEeccccc---eeccccccCCCeEeehhhHHHHHHHHHHhccCcchhHHHHHHHHHHH--HHHHHHHhhCCeEE
Confidence 67999999875332 2222 34589999999997654443332211111111100 011122 24888999999999
Q ss_pred eCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCch
Q 002660 221 TSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPI 300 (895)
Q Consensus 221 ~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (895)
++|+.+.+.+.+.+.. ...++.+||||+|.+.|.+.....
T Consensus 178 ~~S~~~~~~l~~~~~~----------------------~~~~v~vipngvd~~~f~~~~~~~------------------ 217 (397)
T TIGR03087 178 FVSRAEAELFRRLAPE----------------------AAGRITAFPNGVDADFFSPDRDYP------------------ 217 (397)
T ss_pred EcCHHHHHHHHHhCCC----------------------CCCCeEEeecccchhhcCCCcccc------------------
Confidence 9999888776543321 112899999999999887532110
Q ss_pred hHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHH----HHHhcccccCCCcEE-EEEecCCCccccccchHHHHHHHHHHH
Q 002660 301 WSEIMRFFTNPRKPVILALARPDPKKNITTLVK----AFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLI 375 (895)
Q Consensus 301 ~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~----A~~~l~~~~~~~~l~-livG~~~~~~~~~~~~~~~~~~l~~~~ 375 (895)
.. ..+++++|+|+||+++.||++.++. ++..+.+. .+++. +|+|+++. .+ +
T Consensus 218 ----~~--~~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~--~p~~~l~ivG~g~~------------~~----~ 273 (397)
T TIGR03087 218 ----NP--YPPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRAR--RPAAEFYIVGAKPS------------PA----V 273 (397)
T ss_pred ----CC--CCCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHH--CCCcEEEEECCCCh------------HH----H
Confidence 00 1245679999999999999999884 45455432 34444 47888763 11 2
Q ss_pred HhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC-CCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeC
Q 002660 376 DKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF-IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVD 454 (895)
Q Consensus 376 ~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~-~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~ 454 (895)
.++...++|.|.|+++ ++..+|+.| |++|+||. .||++++++||||||+|||+|+.++. .+....++|+++.
T Consensus 274 ~~l~~~~~V~~~G~v~--~~~~~~~~a----dv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~~~~g~lv~ 346 (397)
T TIGR03087 274 RALAALPGVTVTGSVA--DVRPYLAHA----AVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAE-GIDALPGAELLVA 346 (397)
T ss_pred HHhccCCCeEEeeecC--CHHHHHHhC----CEEEecccccCCcccHHHHHHHcCCCEEecCcccc-cccccCCcceEeC
Confidence 2334456799999975 799999999 99999997 69999999999999999999997543 3333456788886
Q ss_pred CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHH
Q 002660 455 PHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 455 p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~ 503 (895)
+|+++++++|.++++|++.++++++++++.+ ++|||+.+++++.++|+
T Consensus 347 -~~~~~la~ai~~ll~~~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 347 -ADPADFAAAILALLANPAEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred -CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 8999999999999999999999999999999 69999999999999885
No 51
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=100.00 E-value=3e-31 Score=301.60 Aligned_cols=373 Identities=18% Similarity=0.225 Sum_probs=249.3
Q ss_pred CCCchhHHHHHHHHHHhcC--CCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecC-CCCCC
Q 002660 27 DTGGQVKYVVELARALGSM--PGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIP-FGPKD 103 (895)
Q Consensus 27 ~~GG~~~~v~~La~~L~~~--G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~-~~~~~ 103 (895)
..||.|+.+++.+.+|.+. + |+|+|+|....... .+.+.. ....+.+ ...+++.++++. .+
T Consensus 12 ~ggg~ervl~~a~~~l~~~~~~--~~v~i~t~~~~~~~--------~~~l~~-~~~~f~~--~~~~~~~~~~~~~~~--- 75 (419)
T cd03806 12 AGGGGERVLWCAVRALQKRYPN--NIVVIYTGDLDATP--------EEILEK-VESRFNI--ELDRPRIVFFLLKYR--- 75 (419)
T ss_pred CCCCchHHHHHHHHHHHHhCCC--cEEEEECCCCCCCH--------HHHHHH-HHHhcCe--ecCCCceEEEEecce---
Confidence 3469999999999999998 6 99999998743211 000000 0000001 112466666653 21
Q ss_pred cccccccCCCCh---HHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEecc-ccc-hhHHHHHhccCCCCEEEEeCCCc
Q 002660 104 KYIAKELLWPHI---PEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHY-ADA-GDSAALLSGALNVPMLFTGHSLG 178 (895)
Q Consensus 104 ~~~~~~~~~~~l---~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~-~~~-~~~~~~~~~~~~ip~v~t~H~~~ 178 (895)
.+++. ..|+.+ .+++..++..+.. +.. .+||||..|. +.. ..++..++ ++|+|++.| +
T Consensus 76 ~~~~~-~~~~r~~~~~~~~~~~~~~~~~----~~~-------~~pDv~i~~~g~~~~~~~~~~~~---~~~~i~y~h--~ 138 (419)
T cd03806 76 KLVEA-STYPRFTLLGQALGSMILGLEA----LLK-------LVPDIFIDTMGYPFTYPLVRLLG---GCPVGAYVH--Y 138 (419)
T ss_pred eeecc-ccCCceeeHHHHHHHHHHHHHH----HHh-------cCCCEEEEcCCcccHHHHHHHhc---CCeEEEEec--C
Confidence 12222 244443 2233222222221 111 4699988886 333 33333333 789999999 3
Q ss_pred h----hhHHHHHHHhh--------ccH----HHHHhh-hhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHH
Q 002660 179 R----DKLEQLLKQAR--------LSR----DEINAT-YKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVL 241 (895)
Q Consensus 179 ~----~~~~~~~~~~~--------~~~----~~~~~~-~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~ 241 (895)
+ +..... ..+. ... ...... |+++.+ .|+..++.||.|+++|+...+.+.+.+...
T Consensus 139 P~~~~d~l~~~-~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~--~~~~~~~~aD~ii~~S~~~~~~~~~~~~~~---- 211 (419)
T cd03806 139 PTISTDMLQKV-RSREASYNNSATIARSPVLSKAKLLYYRLFAF--LYGLAGSFADVVMVNSTWTRNHIRSLWKRN---- 211 (419)
T ss_pred CcchHHHHHHH-hhccccccCccchhccchHHHHHHHHHHHHHH--HHHHHhhcCCEEEECCHHHHHHHHHHhCcC----
Confidence 4 222111 1111 000 011111 222223 378899999999999998777665443210
Q ss_pred HHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeC
Q 002660 242 ERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALAR 321 (895)
Q Consensus 242 ~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgr 321 (895)
.++.+||||+|.+.|.+.... ...+.++|+|+||
T Consensus 212 -------------------~~~~vi~~gvd~~~~~~~~~~---------------------------~~~~~~~il~vgr 245 (419)
T cd03806 212 -------------------TKPSIVYPPCDVEELLKLPLD---------------------------EKTRENQILSIAQ 245 (419)
T ss_pred -------------------CCcEEEcCCCCHHHhcccccc---------------------------cccCCcEEEEEEe
Confidence 278999999999877543210 1245679999999
Q ss_pred CCCCCCHHHHHHHHHhcccccCC---CcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHH
Q 002660 322 PDPKKNITTLVKAFGECRPLREL---ANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPE 397 (895)
Q Consensus 322 l~~~Kgi~~ll~A~~~l~~~~~~---~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ 397 (895)
+.+.||++.+|+||..+.+..+. +++.+ |+|++...+ ..++..++.++++.+++.++|.|+|.+|.+++..
T Consensus 246 ~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~-----~~~~~~~L~~~~~~l~l~~~V~f~g~v~~~~l~~ 320 (419)
T cd03806 246 FRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNED-----DEKRVEDLKLLAKELGLEDKVEFVVNAPFEELLE 320 (419)
T ss_pred ecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcc-----cHHHHHHHHHHHHHhCCCCeEEEecCCCHHHHHH
Confidence 99999999999999998754333 34554 778764321 2346788889999999999999999999999999
Q ss_pred HHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCc-hhccc---cCCCeEEeCCCCHHHHHHHHHHHHhCHH
Q 002660 398 IYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP-VDIHR---VLDNGLLVDPHDQQSVADALLKLVADKQ 473 (895)
Q Consensus 398 ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~-~eiv~---~~~~g~lv~p~d~~~la~ai~~ll~~~~ 473 (895)
+|+.| |++|+|+..|+||++++||||||+|||+++.||+ .|++. ++.+|++++ |+++++++|.+++++++
T Consensus 321 ~l~~a----dv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~~~~ 394 (419)
T cd03806 321 ELSTA----SIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKILSLSE 394 (419)
T ss_pred HHHhC----eEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC--CHHHHHHHHHHHHhCCH
Confidence 99999 9999999999999999999999999999999775 57887 789999985 99999999999999665
Q ss_pred H-HHHHHHHHHHHhhcCCHHHHHH
Q 002660 474 L-WARCRQNGLKNIHLFSWPEHCK 496 (895)
Q Consensus 474 ~-~~~~~~~~~~~~~~~s~~~~a~ 496 (895)
. ++.+++++++..++|||+...+
T Consensus 395 ~~~~~~~~~~~~~~~~fs~~~f~~ 418 (419)
T cd03806 395 EERLRIRRAARSSVKRFSDEEFER 418 (419)
T ss_pred HHHHHHHHHHHHHHHhhCHHHhcc
Confidence 4 4445444444337999998653
No 52
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=100.00 E-value=4.7e-31 Score=294.95 Aligned_cols=268 Identities=23% Similarity=0.306 Sum_probs=218.6
Q ss_pred CCCcEEEeccc-cchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEe
Q 002660 143 VWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 221 (895)
Q Consensus 143 ~~pDvVh~h~~-~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~ 221 (895)
.+||+||+|+. ....++...++..++|++++.|+....... . . ..++..++.+|.+++
T Consensus 78 ~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-----------~--~~~~~~~~~~~~vi~ 136 (355)
T cd03799 78 LGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRSP--------D-----------A--IDLDEKLARADFVVA 136 (355)
T ss_pred cCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEecccccccC--------c-----------h--HHHHHHHhhCCEEEE
Confidence 67999999987 444455555555689999999965321100 0 0 124456889999999
Q ss_pred CChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchh
Q 002660 222 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 301 (895)
Q Consensus 222 ~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (895)
+|+...+.+...+. .+..++.++|||+|.+.|.+...
T Consensus 137 ~s~~~~~~l~~~~~----------------------~~~~~~~vi~~~~d~~~~~~~~~--------------------- 173 (355)
T cd03799 137 ISEYNRQQLIRLLG----------------------CDPDKIHVVHCGVDLERFPPRPP--------------------- 173 (355)
T ss_pred CCHHHHHHHHHhcC----------------------CCcccEEEEeCCcCHHHcCCccc---------------------
Confidence 99988877655531 12238999999999888764320
Q ss_pred HHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCC
Q 002660 302 SEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDL 380 (895)
Q Consensus 302 ~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l 380 (895)
....+++.|+++|++.+.||++.+++++..+... .+++.+ ++|.++. ..++...+.++++
T Consensus 174 ------~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~--~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~ 234 (355)
T cd03799 174 ------PPPGEPLRILSVGRLVEKKGLDYLLEALALLKDR--GIDFRLDIVGDGPL-----------RDELEALIAELGL 234 (355)
T ss_pred ------cccCCCeEEEEEeeeccccCHHHHHHHHHHHhhc--CCCeEEEEEECCcc-----------HHHHHHHHHHcCC
Confidence 0124567899999999999999999999998643 345554 7788764 2456677788888
Q ss_pred CCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCC------CCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeC
Q 002660 381 YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFI------EPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVD 454 (895)
Q Consensus 381 ~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~------Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~ 454 (895)
.++|.|.|+++.+++..+|+.| |++++|+.. |+||++++|||+||+|||+++.|+..+++.++.+|++++
T Consensus 235 ~~~v~~~g~~~~~~l~~~~~~a----di~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~ 310 (355)
T cd03799 235 EDRVTLLGAKSQEEVRELLRAA----DLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVP 310 (355)
T ss_pred CCeEEECCcCChHHHHHHHHhC----CEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEeC
Confidence 8999999999999999999999 999999998 999999999999999999999999999999988999999
Q ss_pred CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHH
Q 002660 455 PHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKT 497 (895)
Q Consensus 455 p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~ 497 (895)
+.|+++++++|.+++++++.+..+++++++.+ ++|||+..+++
T Consensus 311 ~~~~~~l~~~i~~~~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~ 354 (355)
T cd03799 311 PGDPEALADAIERLLDDPELRREMGEAGRARVEEEFDIRKQAAR 354 (355)
T ss_pred CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHhhc
Confidence 99999999999999999999999999999999 59999999875
No 53
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=100.00 E-value=9.8e-31 Score=292.94 Aligned_cols=278 Identities=21% Similarity=0.228 Sum_probs=211.2
Q ss_pred CCCcEEEeccccchhHHHHHhcc-CCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEe
Q 002660 143 VWPVAIHGHYADAGDSAALLSGA-LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 221 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~~~-~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~ 221 (895)
.+||+||+|...+..++..+... .++|++++.|+...... ...+. .+.....++.+++
T Consensus 78 ~~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~----------------~~~~~-----~~~~~~~~~~~~~ 136 (360)
T cd04951 78 FKPDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGR----------------LRMLA-----YRLTDFLSDLTTN 136 (360)
T ss_pred cCCCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhH----------------HHHHH-----HHHHhhccCceEE
Confidence 68999999987665555544433 46789999998743210 00011 1223455777888
Q ss_pred CChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchh
Q 002660 222 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 301 (895)
Q Consensus 222 ~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (895)
+|....+.+.... . .+..++.+||||+|...|.+... ...
T Consensus 137 ~s~~~~~~~~~~~-~---------------------~~~~~~~~i~ng~~~~~~~~~~~------------------~~~ 176 (360)
T cd04951 137 VSKEALDYFIASK-A---------------------FNANKSFVVYNGIDTDRFRKDPA------------------RRL 176 (360)
T ss_pred EcHHHHHHHHhcc-C---------------------CCcccEEEEccccchhhcCcchH------------------HHH
Confidence 8877666654432 1 12238999999999887764321 111
Q ss_pred HHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCC
Q 002660 302 SEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDL 380 (895)
Q Consensus 302 ~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l 380 (895)
..+..+...+++++++++||+.+.||++.+++|+..+.+.. +++.+ ++|+++. ..++.+.+..+++
T Consensus 177 ~~~~~~~~~~~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~--~~~~l~i~G~g~~-----------~~~~~~~~~~~~~ 243 (360)
T cd04951 177 KIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFAKLLSDY--LDIKLLIAGDGPL-----------RATLERLIKALGL 243 (360)
T ss_pred HHHHHcCcCCCCEEEEEEeeCchhcCcHHHHHHHHHHHhhC--CCeEEEEEcCCCc-----------HHHHHHHHHhcCC
Confidence 23334445567889999999999999999999999986433 44554 7888764 2456677778888
Q ss_pred CCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHH
Q 002660 381 YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQS 460 (895)
Q Consensus 381 ~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~ 460 (895)
.++|.|+|. .+++..+|+.| |++|+||..|+||++++|||++|+|||+++.|+..|++.+ +|++++++|+++
T Consensus 244 ~~~v~~~g~--~~~~~~~~~~a----d~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~~~~~~~~ 315 (360)
T cd04951 244 SNRVKLLGL--RDDIAAYYNAA----DLFVLSSAWEGFGLVVAEAMACELPVVATDAGGVREVVGD--SGLIVPISDPEA 315 (360)
T ss_pred CCcEEEecc--cccHHHHHHhh----ceEEecccccCCChHHHHHHHcCCCEEEecCCChhhEecC--CceEeCCCCHHH
Confidence 889999997 57899999999 9999999999999999999999999999999999999875 789999999999
Q ss_pred HHHHHHHHHh-CHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHH
Q 002660 461 VADALLKLVA-DKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 461 la~ai~~ll~-~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~ 503 (895)
++++|.++++ +++.+..++++ ++.+ ++|||+.++++|.++|+
T Consensus 316 ~~~~i~~ll~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 316 LANKIDEILKMSGEERDIIGAR-RERIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred HHHHHHHHHhCCHHHHHHHHHH-HHHHHHhcCHHHHHHHHHHHhh
Confidence 9999999995 56666666665 6666 69999999999999986
No 54
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=100.00 E-value=1.4e-30 Score=288.38 Aligned_cols=344 Identities=22% Similarity=0.279 Sum_probs=250.2
Q ss_pred eEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccc
Q 002660 5 NYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 84 (895)
Q Consensus 5 ~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~ 84 (895)
||++++.+.. + .||.++.+.+++++|+++| |+|++++..... ...+
T Consensus 1 kI~i~~~~~~-----------~-~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~---~~~~----------------- 46 (348)
T cd03820 1 KILFVIPSLG-----------N-AGGAERVLSNLANALAEKG--HEVTIISLDKGE---PPFY----------------- 46 (348)
T ss_pred CeEEEecccc-----------C-CCChHHHHHHHHHHHHhCC--CeEEEEecCCCC---CCcc-----------------
Confidence 5788874432 3 8999999999999999999 999999876432 0000
Q ss_pred cCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhc
Q 002660 85 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSG 164 (895)
Q Consensus 85 ~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~ 164 (895)
...+++.+..++.... . ..+..+ .+...+...+. ..+||+||++... ........
T Consensus 47 --~~~~~~~~~~~~~~~~-~-----~~~~~~-~~~~~~~~~l~--------------~~~~d~i~~~~~~--~~~~~~~~ 101 (348)
T cd03820 47 --ELDPKIKVIDLGDKRD-S-----KLLARF-KKLRRLRKLLK--------------NNKPDVVISFLTS--LLTFLASL 101 (348)
T ss_pred --ccCCccceeecccccc-c-----chhccc-cchHHHHHhhc--------------ccCCCEEEEcCch--HHHHHHHH
Confidence 0123566666654322 1 000000 11111222221 1679999999875 12222222
Q ss_pred cCC-CCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHH
Q 002660 165 ALN-VPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 243 (895)
Q Consensus 165 ~~~-ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~ 243 (895)
..+ +|++++.|+......... .+...++..++.+|.+++.|..........
T Consensus 102 ~~~~~~~i~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~---------- 153 (348)
T cd03820 102 GLKIVKLIVSEHNSPDAYKKRL------------------RRLLLRRLLYRRADAVVVLTEEDRALYYKK---------- 153 (348)
T ss_pred hhccccEEEecCCCccchhhhh------------------HHHHHHHHHHhcCCEEEEeCHHHHHHhhcc----------
Confidence 334 499999998754321110 000025567999999999998765221111
Q ss_pred HHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCC
Q 002660 244 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD 323 (895)
Q Consensus 244 ~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~ 323 (895)
+..++.++|||++...+.+. ...+++.++++|++.
T Consensus 154 ---------------~~~~~~vi~~~~~~~~~~~~------------------------------~~~~~~~i~~~g~~~ 188 (348)
T cd03820 154 ---------------FNKNVVVIPNPLPFPPEEPS------------------------------SDLKSKRILAVGRLV 188 (348)
T ss_pred ---------------CCCCeEEecCCcChhhcccc------------------------------CCCCCcEEEEEEeec
Confidence 11289999999998766532 024578999999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHh
Q 002660 324 PKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLA 402 (895)
Q Consensus 324 ~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A 402 (895)
+.||++.+++|+..+.+. .+++.+ ++|.++.. ..+.+.+.++++.++|.|.|. .+++..+|+.|
T Consensus 189 ~~K~~~~l~~~~~~l~~~--~~~~~l~i~G~~~~~-----------~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a 253 (348)
T cd03820 189 PQKGFDLLIEAWAKIAKK--HPDWKLRIVGDGPER-----------EALEALIKELGLEDRVILLGF--TKNIEEYYAKA 253 (348)
T ss_pred cccCHHHHHHHHHHHHhc--CCCeEEEEEeCCCCH-----------HHHHHHHHHcCCCCeEEEcCC--cchHHHHHHhC
Confidence 999999999999999643 344544 77877642 345567788899999999998 78999999999
Q ss_pred hcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCC-CchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Q 002660 403 AKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG-GPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQN 481 (895)
Q Consensus 403 ~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~g-g~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~ 481 (895)
|++++||..|+||++++|||+||+|||+++.+ +..+++.++.+|+++++.|+++++++|.+++++++.+++++++
T Consensus 254 ----d~~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~ 329 (348)
T cd03820 254 ----SIFVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMEDEELRKRMGAN 329 (348)
T ss_pred ----CEEEeCccccccCHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 99999999999999999999999999999864 5677777777999999999999999999999999999999999
Q ss_pred HHHHhhcCCHHHHHHHHH
Q 002660 482 GLKNIHLFSWPEHCKTYL 499 (895)
Q Consensus 482 ~~~~~~~~s~~~~a~~~~ 499 (895)
+++.+++|+|+.++++|.
T Consensus 330 ~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 330 ARESAERFSIENIIKQWE 347 (348)
T ss_pred HHHHHHHhCHHHHHHHhc
Confidence 977778999999999885
No 55
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=100.00 E-value=3.5e-31 Score=297.21 Aligned_cols=345 Identities=23% Similarity=0.213 Sum_probs=246.8
Q ss_pred eeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCccc
Q 002660 4 NNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 83 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~ 83 (895)
|||++++. + +..||.++++..++++|.++| |+|++++...
T Consensus 1 MkIl~~~~-~------------~~~gG~~~~~~~l~~~l~~~G--~~v~v~~~~~------------------------- 40 (365)
T cd03825 1 MKVLHLNT-S------------DISGGAARAAYRLHRALQAAG--VDSTMLVQEK------------------------- 40 (365)
T ss_pred CeEEEEec-C------------CCCCcHHHHHHHHHHHHHhcC--CceeEEEeec-------------------------
Confidence 79999972 2 345899999999999999999 9999998631
Q ss_pred ccCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHh
Q 002660 84 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLS 163 (895)
Q Consensus 84 ~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~ 163 (895)
. . +...+. ..+|||||+|+...+.+.....
T Consensus 41 -------~----------~-------------------~~~~~~--------------~~~~diih~~~~~~~~~~~~~~ 70 (365)
T cd03825 41 -------K----------A-------------------LISKIE--------------IINADIVHLHWIHGGFLSIEDL 70 (365)
T ss_pred -------c----------h-------------------hhhChh--------------cccCCEEEEEccccCccCHHHH
Confidence 1 0 000011 1679999999864444443333
Q ss_pred ccC--CCCEEEEeCCCchhhHHHHHHHh---------h---c-cHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHH
Q 002660 164 GAL--NVPMLFTGHSLGRDKLEQLLKQA---------R---L-SRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIE 228 (895)
Q Consensus 164 ~~~--~ip~v~t~H~~~~~~~~~~~~~~---------~---~-~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~ 228 (895)
... ++|+|+|+|+.+........... . . ............++. .......++.++++|+...+
T Consensus 71 ~~~~~~~~~v~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~s~~~~~ 148 (365)
T cd03825 71 SKLLDRKPVVWTLHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRK--RKAWADLNLTIVAPSRWLAD 148 (365)
T ss_pred HHHHcCCCEEEEcccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHH--HHHhccCCcEEEehhHHHHH
Confidence 333 99999999987543210000000 0 0 000000000011110 11123567788888886665
Q ss_pred HHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhc
Q 002660 229 EQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFF 308 (895)
Q Consensus 229 ~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (895)
.+...+. + +..++.++|||+|.+.|.+... ......+.
T Consensus 149 ~~~~~~~-~---------------------~~~~~~vi~ngi~~~~~~~~~~--------------------~~~~~~~~ 186 (365)
T cd03825 149 CARSSSL-F---------------------KGIPIEVIPNGIDTTIFRPRDK--------------------REARKRLG 186 (365)
T ss_pred HHHhccc-c---------------------CCCceEEeCCCCcccccCCCcH--------------------HHHHHHhC
Confidence 5433321 1 1238999999999988864321 12233444
Q ss_pred CCCCCcEEEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEE
Q 002660 309 TNPRKPVILALARPDP--KKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVA 385 (895)
Q Consensus 309 ~~~~~~~il~vgrl~~--~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~ 385 (895)
.+++++++++.|+... .||++.+++|++.+.+. ..+++.+ ++|+++... ..++..++.
T Consensus 187 ~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~-~~~~~~~~i~G~~~~~~------------------~~~~~~~v~ 247 (365)
T cd03825 187 LPADKKIILFGAVGGTDPRKGFDELIEALKRLAER-WKDDIELVVFGASDPEI------------------PPDLPFPVH 247 (365)
T ss_pred CCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhc-cCCCeEEEEeCCCchhh------------------hccCCCceE
Confidence 5566777777777765 89999999999988532 2355655 667765311 014556899
Q ss_pred eCCCCC-CCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHH
Q 002660 386 YPKHHK-QSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADA 464 (895)
Q Consensus 386 ~~g~~~-~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~a 464 (895)
|+|+++ .+++..+|+.| |++++||..|+||++++|||+||+|||+++.||..|++.++.+|+++++.|+++++++
T Consensus 248 ~~g~~~~~~~~~~~~~~a----d~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~ 323 (365)
T cd03825 248 YLGSLNDDESLALIYSAA----DVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEG 323 (365)
T ss_pred ecCCcCCHHHHHHHHHhC----CEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHH
Confidence 999998 67899999999 9999999999999999999999999999999999999998889999999999999999
Q ss_pred HHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHHcc
Q 002660 465 LLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAGC 505 (895)
Q Consensus 465 i~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~~~ 505 (895)
|.+++++++.+.++++++++.+ ++|||+.++++|+++|+++
T Consensus 324 l~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~~ 365 (365)
T cd03825 324 IEWLLADPDEREELGEAARELAENEFDSRVQAKRYLSLYEEL 365 (365)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 9999999999999999999999 5999999999999999863
No 56
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=100.00 E-value=1.9e-30 Score=289.58 Aligned_cols=351 Identities=22% Similarity=0.268 Sum_probs=256.9
Q ss_pred CCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCcccc
Q 002660 28 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIA 107 (895)
Q Consensus 28 ~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~~~~ 107 (895)
.||.++++..|+++|.+.| |+|.+++.....+. ...+ ...++.++.++....
T Consensus 11 ~gG~~~~~~~l~~~l~~~~--~~v~~~~~~~~~~~--------~~~~-------------~~~~i~v~~~~~~~~----- 62 (365)
T cd03807 11 VGGAERMLVRLLKGLDRDR--FEHVVISLTDRGEL--------GEEL-------------EEAGVPVYCLGKRPG----- 62 (365)
T ss_pred CccHHHHHHHHHHHhhhcc--ceEEEEecCcchhh--------hHHH-------------HhcCCeEEEEecccc-----
Confidence 3999999999999999999 99999986432110 0000 013677766654221
Q ss_pred cccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhcc-CCCCEEEEeCCCchhhHHHHH
Q 002660 108 KELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGA-LNVPMLFTGHSLGRDKLEQLL 186 (895)
Q Consensus 108 ~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~~-~~ip~v~t~H~~~~~~~~~~~ 186 (895)
+... .+..++...+.+ .+||+||+|.......+...++. .++|++++.|+......
T Consensus 63 ----~~~~-~~~~~~~~~~~~--------------~~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---- 119 (365)
T cd03807 63 ----RPDP-GALLRLYKLIRR--------------LRPDVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLG---- 119 (365)
T ss_pred ----cccH-HHHHHHHHHHHh--------------hCCCEEEeccccccHHHHHHHHhcCCCcEEEEecCCccccc----
Confidence 0111 122223222222 68999999987665555555555 68899999999765421
Q ss_pred HHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEe
Q 002660 187 KQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAII 266 (895)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vi 266 (895)
.. ...+..+ .++...+.+|.+++.|....+.+... .+.. .++.++
T Consensus 120 --~~--------~~~~~~~--~~~~~~~~~~~~i~~s~~~~~~~~~~--~~~~---------------------~~~~vi 164 (365)
T cd03807 120 --KK--------STRLVAR--LRRLLSSFIPLIVANSAAAAEYHQAI--GYPP---------------------KKIVVI 164 (365)
T ss_pred --ch--------hHhHHHH--HHHHhccccCeEEeccHHHHHHHHHc--CCCh---------------------hheeEe
Confidence 00 0001111 14456788999999998766655432 2222 389999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc
Q 002660 267 PPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELAN 346 (895)
Q Consensus 267 p~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~ 346 (895)
|||+|...|.+.... ....+.+++.+++.++++++||+.+.||++.+++|+..+.+. .++
T Consensus 165 ~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~--~~~ 224 (365)
T cd03807 165 PNGVDTERFSPDLDA------------------RARLREELGLPEDTFLIGIVARLHPQKDHATLLRAAALLLKK--FPN 224 (365)
T ss_pred CCCcCHHhcCCcccc------------------hHHHHHhcCCCCCCeEEEEecccchhcCHHHHHHHHHHHHHh--CCC
Confidence 999998877653311 112233455566788999999999999999999999998643 344
Q ss_pred EEE-EEecCCCccccccchHHHHHHHHHHHH-hcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHH
Q 002660 347 LTL-IMGNRDGIDEMSSTSASVLLSVLKLID-KYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIE 424 (895)
Q Consensus 347 l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~-~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~E 424 (895)
+.+ ++|.++... .+..... ..++.+++.|.|. .+++..+|+.| |++|+|+..|++|++++|
T Consensus 225 ~~l~i~G~~~~~~-----------~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a----di~v~ps~~e~~~~~~~E 287 (365)
T cd03807 225 ARLLLVGDGPDRA-----------NLELLALKELGLEDKVILLGE--RSDVPALLNAL----DVFVLSSLSEGFPNVLLE 287 (365)
T ss_pred eEEEEecCCcchh-----------HHHHHHHHhcCCCceEEEccc--cccHHHHHHhC----CEEEeCCccccCCcHHHH
Confidence 554 678775422 2223333 7788889999996 57899999999 999999999999999999
Q ss_pred HHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHH
Q 002660 425 AAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 425 a~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~ 503 (895)
||+||+|||+++.|+..|++.+ +|++++++|+++++++|.+++++++.+.++++++++.+ ++|||+..+++|.++|+
T Consensus 288 a~a~g~PvI~~~~~~~~e~~~~--~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~ 365 (365)
T cd03807 288 AMACGLPVVATDVGDNAELVGD--TGFLVPPGDPEALAEAIEALLADPALRQALGEAARERIEENFSIEAMVEAYEELYR 365 (365)
T ss_pred HHhcCCCEEEcCCCChHHHhhc--CCEEeCCCCHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 9999999999999999999876 89999999999999999999999999999999999999 58999999999999874
No 57
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=5.7e-33 Score=304.06 Aligned_cols=341 Identities=28% Similarity=0.369 Sum_probs=250.2
Q ss_pred ccCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHh
Q 002660 84 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLS 163 (895)
Q Consensus 84 ~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~ 163 (895)
+......+++++++|+++...|. ..+|+++..|+.... ++.+.. +. ||++|.++|+......+++
T Consensus 121 ~~~~~~~~~~il~~~~~~~~k~~--~~~d~~i~d~~~~~~-~l~~~~-----------~~-p~~~~~i~~~~h~~~~lla 185 (495)
T KOG0853|consen 121 EQVAGCAYLRILRIPFGILFKWA--EKVDPIIEDFVSACV-PLLKQL-----------SG-PDVIIKIYFYCHFPDSLLA 185 (495)
T ss_pred hhhhccceeEEEEeccchhhhhh--hhhceeecchHHHHH-HHHHHh-----------cC-CcccceeEEeccchHHHhc
Confidence 44455679999999998765555 678999998885433 332221 13 9999999999999999999
Q ss_pred ccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHH
Q 002660 164 GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 243 (895)
Q Consensus 164 ~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~ 243 (895)
++.|++.+.+.|.+...+++. ...+|.+++.+...+.............
T Consensus 186 ~r~g~~~~l~~~~l~~~e~e~----------------------------~~~~~~~~~ns~~~~~~f~~~~~~L~~~--- 234 (495)
T KOG0853|consen 186 KRLGVLKVLYRHALDKIEEET----------------------------TGLAWKILVNSYFTKRQFKATFVSLSNS--- 234 (495)
T ss_pred cccCccceeehhhhhhhhhhh----------------------------hhccceEecchhhhhhhhhhhhhhcCCC---
Confidence 999999999999886655433 4445555555554444433333222221
Q ss_pred HHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCC
Q 002660 244 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD 323 (895)
Q Consensus 244 ~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~ 323 (895)
.+.+.+++||.+.+.+..-+.... .....+...+......+++.+.|+.
T Consensus 235 ------------------d~~~~y~ei~~s~~~~~~~~~~~~-------------~~~~~r~~~~v~~~d~~~~siN~~~ 283 (495)
T KOG0853|consen 235 ------------------DITSTYPEIDGSWFTYGQYESHLE-------------LRLPVRLYRGVSGIDRFFPSINRFE 283 (495)
T ss_pred ------------------Ccceeeccccchhccccccccchh-------------cccccceeeeecccceEeeeeeecC
Confidence 366777777766665421111000 0001111222334467899999999
Q ss_pred CCCCHHHHHHHHHhcccccCC---CcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCC-CcEEeCCCCCCCCHHHHH
Q 002660 324 PKKNITTLVKAFGECRPLREL---ANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY-GQVAYPKHHKQSDVPEIY 399 (895)
Q Consensus 324 ~~Kgi~~ll~A~~~l~~~~~~---~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~-~~v~~~g~~~~~el~~ly 399 (895)
+.||+...++||..+...-+. +..++++++.+.++...++..+++.++..+++++++. ..|.|..+.++.+. |
T Consensus 284 pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~s~~~~~~---y 360 (495)
T KOG0853|consen 284 PGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDLLGQFVWFLPSTTRVAK---Y 360 (495)
T ss_pred CCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCccCceEEEecCCchHHH---H
Confidence 999999999999988654432 4555544442237778888999999999999999996 56777788665554 5
Q ss_pred HHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHH---HHHHHHHHHHhCHHHHH
Q 002660 400 RLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQ---SVADALLKLVADKQLWA 476 (895)
Q Consensus 400 ~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~---~la~ai~~ll~~~~~~~ 476 (895)
+.+++++.+++.|+. |.||+|++|||+||+|||+++.||+.|+|.++.+|++++| +.+ .+|++|.++.+||+.|.
T Consensus 361 rl~adt~~v~~qPa~-E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp-~~e~~~~~a~~~~kl~~~p~l~~ 438 (495)
T KOG0853|consen 361 RLAADTKGVLYQPAN-EHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLIDP-GQEAVAELADALLKLRRDPELWA 438 (495)
T ss_pred HHHHhcceEEecCCC-CCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceeeCC-chHHHHHHHHHHHHHhcCHHHHH
Confidence 665556667777777 9999999999999999999999999999999999999999 666 59999999999999999
Q ss_pred HHHHHHHHHhh-cCCHHHHHHHHHHHHHccc
Q 002660 477 RCRQNGLKNIH-LFSWPEHCKTYLSRIAGCK 506 (895)
Q Consensus 477 ~~~~~~~~~~~-~~s~~~~a~~~~~~~~~~~ 506 (895)
+|+.+++++++ .|||.++.+++.+.+....
T Consensus 439 ~~~~~G~~rV~e~fs~~~~~~ri~~~~~~~~ 469 (495)
T KOG0853|consen 439 RMGKNGLKRVKEMFSWQHYSERIASVLGKYL 469 (495)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhHhcC
Confidence 99999999995 7999888888888777443
No 58
>PLN02949 transferase, transferring glycosyl groups
Probab=100.00 E-value=1.3e-30 Score=296.72 Aligned_cols=238 Identities=18% Similarity=0.203 Sum_probs=194.7
Q ss_pred HHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCC
Q 002660 209 EELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEG 288 (895)
Q Consensus 209 e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~ 288 (895)
++.+.+.||.|+++|+...+.+.+.+.. + .++.+++||+|.+.+......
T Consensus 214 ~~~~~~~ad~ii~nS~~t~~~l~~~~~~--~---------------------~~i~vvyp~vd~~~~~~~~~~------- 263 (463)
T PLN02949 214 YGLVGRCAHLAMVNSSWTKSHIEALWRI--P---------------------ERIKRVYPPCDTSGLQALPLE------- 263 (463)
T ss_pred HHHHcCCCCEEEECCHHHHHHHHHHcCC--C---------------------CCeEEEcCCCCHHHcccCCcc-------
Confidence 6678899999999999887766544321 1 278999999998766321100
Q ss_pred CCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhccccc--CCCcEEE-EEecCCCccccccchH
Q 002660 289 NEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLR--ELANLTL-IMGNRDGIDEMSSTSA 365 (895)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~--~~~~l~l-ivG~~~~~~~~~~~~~ 365 (895)
..+++++++++||+.++||++.+|+||..+.+.. ..+++.+ |+|+++.. +..
T Consensus 264 --------------------~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~~-----~~~ 318 (463)
T PLN02949 264 --------------------RSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRNK-----EDE 318 (463)
T ss_pred --------------------ccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCCc-----ccH
Confidence 0234678999999999999999999999875321 1244544 77876421 223
Q ss_pred HHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCch-hcc
Q 002660 366 SVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPV-DIH 444 (895)
Q Consensus 366 ~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~-eiv 444 (895)
++..++.++++++++.++|.|+|+++.+++..+|+.| +++|+|+..|+||++++||||||+|||+++.||+. |++
T Consensus 319 ~~~~eL~~la~~l~L~~~V~f~g~v~~~el~~ll~~a----~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV 394 (463)
T PLN02949 319 ERLQKLKDRAKELGLDGDVEFHKNVSYRDLVRLLGGA----VAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIV 394 (463)
T ss_pred HHHHHHHHHHHHcCCCCcEEEeCCCCHHHHHHHHHhC----cEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceee
Confidence 4567889999999999999999999999999999999 99999999999999999999999999999999975 777
Q ss_pred cc---CCCeEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccC
Q 002660 445 RV---LDNGLLVDPHDQQSVADALLKLVA-DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKP 507 (895)
Q Consensus 445 ~~---~~~g~lv~p~d~~~la~ai~~ll~-~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~~~ 507 (895)
.+ +.+|++++ |+++++++|.++++ +++.++++++++++.+++|||+..++++.+.++++++
T Consensus 395 ~~~~~g~tG~l~~--~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~~ 459 (463)
T PLN02949 395 LDEDGQQTGFLAT--TVEEYADAILEVLRMRETERLEIAAAARKRANRFSEQRFNEDFKDAIRPILN 459 (463)
T ss_pred ecCCCCcccccCC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh
Confidence 64 56798875 99999999999998 5788899999999999889999999999999998765
No 59
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=100.00 E-value=1.5e-30 Score=290.15 Aligned_cols=372 Identities=25% Similarity=0.321 Sum_probs=268.5
Q ss_pred eEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccc
Q 002660 5 NYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 84 (895)
Q Consensus 5 ~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~ 84 (895)
||++++.... |..||...++..|+++|.+.| |+|++++........... .
T Consensus 1 kI~ii~~~~~-----------~~~~G~~~~~~~l~~~L~~~g--~~v~i~~~~~~~~~~~~~-------~---------- 50 (374)
T cd03801 1 KILLVTPEYP-----------PSVGGAERHVLELARALAARG--HEVTVLTPGDGGLPDEEE-------V---------- 50 (374)
T ss_pred CeeEEecccC-----------CccCcHhHHHHHHHHHHHhcC--ceEEEEecCCCCCCceee-------e----------
Confidence 6888885553 446999999999999999999 999999986432211000 0
Q ss_pred cCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhc
Q 002660 85 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSG 164 (895)
Q Consensus 85 ~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~ 164 (895)
.......... . . ..........+...+... +.+ .+||+||++.+.........++
T Consensus 51 -----~~~~~~~~~~--~---~-~~~~~~~~~~~~~~~~~~-------~~~-------~~~Dii~~~~~~~~~~~~~~~~ 105 (374)
T cd03801 51 -----GGIVVVRPPP--L---L-RVRRLLLLLLLALRLRRL-------LRR-------ERFDVVHAHDWLALLAAALAAR 105 (374)
T ss_pred -----cCcceecCCc--c---c-ccchhHHHHHHHHHHHHH-------hhh-------cCCcEEEEechhHHHHHHHHHH
Confidence 0000000000 0 0 000000000111111111 111 6799999999865555556777
Q ss_pred cCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHH
Q 002660 165 ALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERK 244 (895)
Q Consensus 165 ~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~ 244 (895)
..++|++++.|+......... ......+ ....++..++.+|.+++.|....+.+.+.+..
T Consensus 106 ~~~~~~i~~~h~~~~~~~~~~----------~~~~~~~--~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~-------- 165 (374)
T cd03801 106 LLGIPLVLTVHGLEFGRPGNE----------LGLLLKL--ARALERRALRRADRIIAVSEATREELRELGGV-------- 165 (374)
T ss_pred hcCCcEEEEeccchhhccccc----------hhHHHHH--HHHHHHHHHHhCCEEEEecHHHHHHHHhcCCC--------
Confidence 789999999999865432110 0000111 11125567899999999999888776555432
Q ss_pred HHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCC
Q 002660 245 LRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDP 324 (895)
Q Consensus 245 l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~ 324 (895)
+..++.++|||+|...+.+.. ...........+++.++++|++.+
T Consensus 166 --------------~~~~~~~i~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~i~~~g~~~~ 210 (374)
T cd03801 166 --------------PPEKITVIPNGVDTERFRPAP---------------------RAARRRLGIPEDEPVILFVGRLVP 210 (374)
T ss_pred --------------CCCcEEEecCcccccccCccc---------------------hHHHhhcCCcCCCeEEEEecchhh
Confidence 112899999999998875421 001111222456789999999999
Q ss_pred CCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhh
Q 002660 325 KKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAA 403 (895)
Q Consensus 325 ~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~ 403 (895)
.||++.+++|+..+.... +++.+ ++|+++. ...+...+.+.+..++|.|.|+++.+++..+|+.|
T Consensus 211 ~k~~~~~i~~~~~~~~~~--~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~- 276 (374)
T cd03801 211 RKGVDLLLEALAKLRKEY--PDVRLVIVGDGPL-----------REELEALAAELGLGDRVTFLGFVPDEDLPALYAAA- 276 (374)
T ss_pred hcCHHHHHHHHHHHhhhc--CCeEEEEEeCcHH-----------HHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhc-
Confidence 999999999999986433 45554 6775542 34555666778888999999999999999999999
Q ss_pred cCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 002660 404 KTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGL 483 (895)
Q Consensus 404 ~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~ 483 (895)
|++++|+..|++|++++|||+||+|||+++.++..+++.++.+|+++++.|+++++++|.+++++++.+.+++++++
T Consensus 277 ---di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~ 353 (374)
T cd03801 277 ---DVFVLPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDPELRRRLGEAAR 353 (374)
T ss_pred ---CEEEecchhccccchHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcChHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988999999999999999999999999999999999999
Q ss_pred HHh-hcCCHHHHHHHHHHHHH
Q 002660 484 KNI-HLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 484 ~~~-~~~s~~~~a~~~~~~~~ 503 (895)
+.+ +.|+|+.+++++.++|+
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~ 374 (374)
T cd03801 354 ERVAERFSWDRVAARTEEVYY 374 (374)
T ss_pred HHHHHhcCHHHHHHHHHHhhC
Confidence 777 69999999999998873
No 60
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.98 E-value=9.8e-30 Score=282.86 Aligned_cols=347 Identities=25% Similarity=0.311 Sum_probs=253.9
Q ss_pred CCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCcccc
Q 002660 28 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIA 107 (895)
Q Consensus 28 ~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~~~~ 107 (895)
.||.+.++..++++|.+.| |+|++++....... . ....++.++.++.... ...
T Consensus 9 ~~g~~~~~~~l~~~L~~~g--~~v~~~~~~~~~~~----------~-------------~~~~~~~~~~~~~~~~--~~~ 61 (359)
T cd03808 9 DGGLYSFRLPLIKALRAAG--YEVHVVAPPGDELE----------E-------------LEALGVKVIPIPLDRR--GIN 61 (359)
T ss_pred chhHHHHHHHHHHHHHhcC--CeeEEEecCCCccc----------c-------------cccCCceEEecccccc--ccC
Confidence 5799999999999999999 99999987642211 0 0123777777775431 000
Q ss_pred cccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhc-cCCCCEEEEeCCCchhhHHHHH
Q 002660 108 KELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSG-ALNVPMLFTGHSLGRDKLEQLL 186 (895)
Q Consensus 108 ~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~-~~~ip~v~t~H~~~~~~~~~~~ 186 (895)
.+..+. ....+...+ .+ .+||+||+|......++...++ ..+.+++++.|+..........
T Consensus 62 ---~~~~~~-~~~~~~~~~-------~~-------~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 123 (359)
T cd03808 62 ---PFKDLK-ALLRLYRLL-------RK-------ERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFTSGGL 123 (359)
T ss_pred ---hHhHHH-HHHHHHHHH-------Hh-------cCCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhccchh
Confidence 111111 111111111 12 6799999998766666666655 4456788888886543211100
Q ss_pred HHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEe
Q 002660 187 KQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAII 266 (895)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vi 266 (895)
.......+ ++..++.+|.+++.|+...+.+...+.... ..++.++
T Consensus 124 ------------~~~~~~~~--~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~---------------------~~~~~~~ 168 (359)
T cd03808 124 ------------KRRLYLLL--ERLALRFTDKVIFQNEDDRDLALKLGIIKK---------------------KKTVLIP 168 (359)
T ss_pred ------------HHHHHHHH--HHHHHhhccEEEEcCHHHHHHHHHhcCCCc---------------------CceEEec
Confidence 11122222 566788999999999988776655432110 1278889
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc
Q 002660 267 PPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELAN 346 (895)
Q Consensus 267 p~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~ 346 (895)
|+|+|.+.+.+.... ...+++.|+++|++.+.||++.+++++..+.+. .++
T Consensus 169 ~~~~~~~~~~~~~~~---------------------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~--~~~ 219 (359)
T cd03808 169 GSGVDLDRFSPSPEP---------------------------IPEDDPVFLFVARLLKDKGIDELLEAARILKAK--GPN 219 (359)
T ss_pred CCCCChhhcCccccc---------------------------cCCCCcEEEEEeccccccCHHHHHHHHHHHHhc--CCC
Confidence 999999877643210 124678999999999999999999999998642 344
Q ss_pred EEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHH
Q 002660 347 LTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEA 425 (895)
Q Consensus 347 l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea 425 (895)
+.+ ++|.++...... .. .+...+..++|.|.|+ .+++..+|+.| |++++|+..|++|++++||
T Consensus 220 ~~l~i~G~~~~~~~~~--------~~--~~~~~~~~~~v~~~g~--~~~~~~~~~~a----di~i~ps~~e~~~~~~~Ea 283 (359)
T cd03808 220 VRLLLVGDGDEENPAA--------IL--EIEKLGLEGRVEFLGF--RDDVPELLAAA----DVFVLPSYREGLPRVLLEA 283 (359)
T ss_pred eEEEEEcCCCcchhhH--------HH--HHHhcCCcceEEEeec--cccHHHHHHhc----cEEEecCcccCcchHHHHH
Confidence 554 778776432211 10 3566777789999998 78999999999 9999999999999999999
Q ss_pred HHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHH
Q 002660 426 AAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYL 499 (895)
Q Consensus 426 ~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~ 499 (895)
|+||+|||+++.++..+++.++.+|++++++|+++++++|.+++.+++.+.++++++++.+ ++|||+.++++|+
T Consensus 284 ~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 284 MAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIEDPELRARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHcCCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 9999999999999999999988999999999999999999999999999999999999997 7999999999876
No 61
>PRK10976 putative hydrolase; Provisional
Probab=99.98 E-value=1.2e-31 Score=287.13 Aligned_cols=236 Identities=12% Similarity=0.082 Sum_probs=159.3
Q ss_pred CeEEEEEecCCCC---cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeec
Q 002660 612 KHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 688 (895)
Q Consensus 612 ~kli~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~ 688 (895)
.|+|++|+||||. +.+++.++++|++++++ |+.|+|||||++.++.+++++++++ +++||+||+.|++.
T Consensus 2 ikli~~DlDGTLl~~~~~is~~~~~ai~~l~~~----G~~~~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~i~~~ 73 (266)
T PRK10976 2 YQVVASDLDGTLLSPDHTLSPYAKETLKLLTAR----GIHFVFATGRHHVDVGQIRDNLEIK----SYMITSNGARVHDT 73 (266)
T ss_pred ceEEEEeCCCCCcCCCCcCCHHHHHHHHHHHHC----CCEEEEEcCCChHHHHHHHHhcCCC----CeEEEcCCcEEECC
Confidence 4899999999993 56889999999999998 5999999999999999999999983 57999999999964
Q ss_pred cCCCCCCCcccchhhHHHhhcccCcchHHHHHHhhhh---hc--c-cc-----------------ccccCCcccc-cccc
Q 002660 689 TLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWAS---QV--T-DK-----------------KAESGEKVLT-PAEQ 744 (895)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~--~-~~-----------------~~~~~~~~~~-~~~~ 744 (895)
..+.. ... .+..+.+.+++..... .. . .. .......... ....
T Consensus 74 ~~~~i-~~~------------~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (266)
T PRK10976 74 DGNLI-FSH------------NLDRDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLE 140 (266)
T ss_pred CCCEe-hhh------------cCCHHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcc
Confidence 22110 000 0011111111110000 00 0 00 0000000000 0000
Q ss_pred cCCceEEEEEeeCCCCCccHHHHHHHHHhc-cCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCC
Q 002660 745 LSTNYCYAFSVQKPGMTPPVKELRKVLRIQ-ALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGES 823 (895)
Q Consensus 745 ~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~ 823 (895)
.....|+.+...++ ...+++.+.+... ...+.++.+.+. ++||+|+|+|||.||++|++++||+++++|| +||+
T Consensus 141 ~~~i~ki~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~s~~~-~~eI~~~gvsKg~al~~l~~~lgi~~~~via-fGD~ 215 (266)
T PRK10976 141 PDGVSKVFFTCDSH---EKLLPLEQAINARWGDRVNVSFSTLT-CLEVMAGGVSKGHALEAVAKKLGYSLKDCIA-FGDG 215 (266)
T ss_pred cCCceEEEEEcCCH---HHHHHHHHHHHHHhCCcEEEEEeCCc-eEEEEcCCCChHHHHHHHHHHcCCCHHHeEE-EcCC
Confidence 11234444332111 1233445555432 234666777775 9999999999999999999999999999999 7777
Q ss_pred CCCCccccccCcceEEEecCccccccccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHHHhCc
Q 002660 824 GDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGL 892 (895)
Q Consensus 824 nn~D~~eMl~~ag~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~~l 892 (895)
.| | ++||+.+|+||||+||. +++|+.|++ .+||.++++|||+++|++|.+
T Consensus 216 ~N-D-i~Ml~~ag~~vAm~NA~--~~vK~~A~~---------------~~v~~~n~edGVa~~l~~~~~ 265 (266)
T PRK10976 216 MN-D-AEMLSMAGKGCIMGNAH--QRLKDLLPE---------------LEVIGSNADDAVPHYLRKLYL 265 (266)
T ss_pred cc-c-HHHHHHcCCCeeecCCc--HHHHHhCCC---------------CeecccCchHHHHHHHHHHhh
Confidence 77 7 99999999999999999 666777652 248999999999999999854
No 62
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.98 E-value=6.3e-30 Score=285.32 Aligned_cols=356 Identities=21% Similarity=0.247 Sum_probs=245.4
Q ss_pred eEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccc
Q 002660 5 NYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 84 (895)
Q Consensus 5 ~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~ 84 (895)
||++++.+.. +..+||.++++.+|+++|+++| |+|++++......... ..
T Consensus 1 kIl~i~~~~~----------~~~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~~--~~---------------- 50 (359)
T cd03823 1 RILVVNHLYP----------PRSVGGAEVVAHDLAEALAKRG--HEVAVLTAGEDPPRQD--KE---------------- 50 (359)
T ss_pred CeeEEcccCC----------cccccchHHHHHHHHHHHHhcC--CceEEEeCCCCCCCcc--cc----------------
Confidence 6888985543 2347999999999999999999 9999998764321110 00
Q ss_pred cCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEecccc-chhHHHHHh
Q 002660 85 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYAD-AGDSAALLS 163 (895)
Q Consensus 85 ~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~-~~~~~~~~~ 163 (895)
..+..+...+.............+.....+.......+.+ .+.+ .+||+||+|... ........+
T Consensus 51 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------~~~dii~~~~~~~~~~~~~~~~ 116 (359)
T cd03823 51 ----VIGVVVYGRPIDEVLRSALPRDLFHLSDYDNPAVVAEFAR---LLED-------FRPDVVHFHHLQGLGVSILRAA 116 (359)
T ss_pred ----cccceeeccccccccCCCchhhhhHHHhccCHHHHHHHHH---HHHH-------cCCCEEEECCccchHHHHHHHH
Confidence 0011111111000000000000000000000011111111 1111 679999999863 333344456
Q ss_pred ccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHH
Q 002660 164 GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 243 (895)
Q Consensus 164 ~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~ 243 (895)
+..++|+|++.|+.+...... . ......|.++++|+...+.+.....
T Consensus 117 ~~~~~~~i~~~hd~~~~~~~~-------------------~------~~~~~~d~ii~~s~~~~~~~~~~~~-------- 163 (359)
T cd03823 117 RDRGIPIVLTLHDYWLICPRQ-------------------G------LFKKGGDAVIAPSRFLLDRYVANGL-------- 163 (359)
T ss_pred HhcCCCEEEEEeeeeeecchh-------------------h------hhccCCCEEEEeCHHHHHHHHHcCC--------
Confidence 677899999999875422100 0 0122239999999877666544321
Q ss_pred HHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCC
Q 002660 244 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD 323 (895)
Q Consensus 244 ~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~ 323 (895)
+..++.++|||+|...+.+... ....++++++++|++.
T Consensus 164 ---------------~~~~~~vi~n~~~~~~~~~~~~---------------------------~~~~~~~~i~~~G~~~ 201 (359)
T cd03823 164 ---------------FAEKISVIRNGIDLDRAKRPRR---------------------------APPGGRLRFGFIGQLT 201 (359)
T ss_pred ---------------CccceEEecCCcChhhcccccc---------------------------CCCCCceEEEEEecCc
Confidence 1128999999999988764321 1135678899999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHh
Q 002660 324 PKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLA 402 (895)
Q Consensus 324 ~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A 402 (895)
+.||++.+++++..+.+ +++.+ ++|.++..... .... +..++|.|.|+++.+++..+|+.|
T Consensus 202 ~~k~~~~li~~~~~l~~----~~~~l~i~G~~~~~~~~-----------~~~~---~~~~~v~~~g~~~~~~~~~~~~~a 263 (359)
T cd03823 202 PHKGVDLLLEAFKRLPR----GDIELVIVGNGLELEEE-----------SYEL---EGDPRVEFLGAYPQEEIDDFYAEI 263 (359)
T ss_pred cccCHHHHHHHHHHHHh----cCcEEEEEcCchhhhHH-----------HHhh---cCCCeEEEeCCCCHHHHHHHHHhC
Confidence 99999999999999853 34444 77877642211 0111 556789999999999999999999
Q ss_pred hcCCcEEEecCC-CCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Q 002660 403 AKTKGVFINPAF-IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQN 481 (895)
Q Consensus 403 ~~~~dv~v~ps~-~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~ 481 (895)
|++++||. .||+|++++|||+||+|||+++.|+..|++.++.+|++++++|+++++++|.+++++++.++.++++
T Consensus 264 ----d~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~ 339 (359)
T cd03823 264 ----DVLVVPSIWPENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDDPDLLERLRAG 339 (359)
T ss_pred ----CEEEEcCcccCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhChHHHHHHHHh
Confidence 99999997 7999999999999999999999999999999988999999999999999999999999999999998
Q ss_pred HHHHhhcCCHHHHHHHHHHHHHc
Q 002660 482 GLKNIHLFSWPEHCKTYLSRIAG 504 (895)
Q Consensus 482 ~~~~~~~~s~~~~a~~~~~~~~~ 504 (895)
+++..+. +.++++++++|++
T Consensus 340 ~~~~~~~---~~~~~~~~~~~~~ 359 (359)
T cd03823 340 IEPPRSI---EDQAEEYLKLYRS 359 (359)
T ss_pred HHHhhhH---HHHHHHHHHHhhC
Confidence 8877643 8899999988863
No 63
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.98 E-value=3.9e-31 Score=279.50 Aligned_cols=242 Identities=17% Similarity=0.246 Sum_probs=182.3
Q ss_pred CeEEEEEecCCCCc------chhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceE
Q 002660 612 KHIFVISVDCDSTT------GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDL 685 (895)
Q Consensus 612 ~kli~~DiDGTL~~------~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I 685 (895)
+.+|++|+||||.. ..++.+.+++++++++ |+.|++||||++.++.++++++++. .|+++||+||+.|
T Consensus 1 ~~li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~~----gi~fv~aTGR~~~~~~~~~~~~~~~--~p~~~I~~NGa~I 74 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTDGDNQALLRLNALLEDHRGE----DSLLVYSTGRSPHSYKELQKQKPLL--TPDIWVTSVGSEI 74 (249)
T ss_pred CeEEEEcCCCcCcCCCCCChHHHHHHHHHHHHhhcc----CceEEEEcCCCHHHHHHHHhcCCCC--CCCEEEEcCCceE
Confidence 35899999999953 4567888888888887 5899999999999999999999884 5788999999999
Q ss_pred eeccCCCCCCCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEEEeeCCCCCccHH
Q 002660 686 YYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVK 765 (895)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 765 (895)
++.+ ....+..|...+...|..+.+..+...+....... ......+|+++..........++
T Consensus 75 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------------~~~~~~~k~~~~~~~~~~~~~~~ 136 (249)
T TIGR01485 75 YYGG------AEVPDQHWAEYLSEKWQRDIVVAITDKFEELKPQP------------DLEQRPHKVSFFLDPEAAPEVIK 136 (249)
T ss_pred EeCC------CCcCCHHHHHHHhcccCHHHHHHHHhcCcccccCC------------ccccCCeeEEEEechhhhhHHHH
Confidence 9754 23456788888888887544444332222211111 11245788877753222122245
Q ss_pred HHHHHHHhccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccC-cceEEEecCc
Q 002660 766 ELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGG-VHKTVILKGI 844 (895)
Q Consensus 766 ~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~-ag~gVaMgNa 844 (895)
++.+.+...+..+.++.+.+. ++||+|+++|||.||++|++++|++++++++ +||+.| | ++||+. ++.+|||+||
T Consensus 137 ~l~~~l~~~~~~~~~~~~~~~-~ldi~~~~~~K~~al~~l~~~~~i~~~~~i~-~GD~~N-D-~~ml~~~~~~~va~~na 212 (249)
T TIGR01485 137 QLTEMLKETGLDVKLIYSSGK-DLDILPQGSGKGQALQYLLQKLAMEPSQTLV-CGDSGN-D-IELFEIGSVRGVIVSNA 212 (249)
T ss_pred HHHHHHHhcCCCEEEEEECCc-eEEEEeCCCChHHHHHHHHHHcCCCccCEEE-EECChh-H-HHHHHccCCcEEEECCC
Confidence 566666665666777788775 9999999999999999999999999999999 666667 7 999998 7799999999
Q ss_pred cccccccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHHHhCcc
Q 002660 845 CSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLL 893 (895)
Q Consensus 845 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~~li 893 (895)
. .+.|..++. .+.+ ..|+|+.+.++||++||+||||+
T Consensus 213 ~--~~~k~~~~~---------~~~~-~~~~~~~~~~~Gi~e~l~~~~~~ 249 (249)
T TIGR01485 213 Q--EELLQWYDE---------NAKD-KIYHASERCAGGIIEAIAHFDLL 249 (249)
T ss_pred H--HHHHHHHHh---------cccC-cEEEecCCCcHHHHHHHHHcCCC
Confidence 9 656655431 0122 44688999999999999999985
No 64
>PLN02382 probable sucrose-phosphatase
Probab=99.97 E-value=3.8e-31 Score=295.43 Aligned_cols=247 Identities=19% Similarity=0.240 Sum_probs=182.2
Q ss_pred cccCeEEEEEecCCCCc-----chhHH-HHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCC
Q 002660 609 RRRKHIFVISVDCDSTT-----GLLDA-TKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSG 682 (895)
Q Consensus 609 ~~~~kli~~DiDGTL~~-----~~~~~-~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nG 682 (895)
..++.+|++||||||.. ..+.. ....+++++++ |+.|++||||++.++.++++++++. .||++||+||
T Consensus 6 ~~~~~lI~sDLDGTLL~~~~~~~~s~~~~~~l~~~~~~~----gi~fv~aTGR~~~~~~~l~~~~~l~--~p~~~I~~nG 79 (413)
T PLN02382 6 GSPRLMIVSDLDHTMVDHHDPENLSLLRFNALWEAEYRH----DSLLVFSTGRSPTLYKELRKEKPLL--TPDITIMSVG 79 (413)
T ss_pred CCCCEEEEEcCCCcCcCCCCccchhHHHHHHHHHHhhcC----CeeEEEEcCCCHHHHHHHHHhCCCC--CCCEEEEcCC
Confidence 34577999999999942 23323 33333666666 6999999999999999999999884 5899999999
Q ss_pred ceEeeccCCCCCCCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEEEeeCCCCCc
Q 002660 683 SDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTP 762 (895)
Q Consensus 683 a~I~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~ 762 (895)
++|++.+ ....+..|...+...|....+.+.+..++....+ ....+..+|++++..+.....
T Consensus 80 t~I~~~~------~~~~d~~w~~~l~~~w~~~~v~~~~~~~~~l~~q------------~~~~~~~~Ki~~~~~~~~~~~ 141 (413)
T PLN02382 80 TEIAYGE------SMVPDHGWVEYLNKKWDREIVVEETSKFPELKLQ------------PETEQRPHKVSFYVDKKKAQE 141 (413)
T ss_pred cEEEeCC------CCccChhHHHHHhccCChhhHHHHHhcCCCcccC------------CcccCCCeEEEEEechHHhHH
Confidence 9999864 4456788999999999865554444444322211 112356788888764222112
Q ss_pred cHHHHHHHHHhccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHh---CCCcccEEEEecCCCCCCccccccCcc-eE
Q 002660 763 PVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRW---GVELSKMVVFVGESGDTDYEGLLGGVH-KT 838 (895)
Q Consensus 763 ~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~---gi~~~~viaf~Gd~nn~D~~eMl~~ag-~g 838 (895)
..+.+.+.+...+..+.++.+.+. ++||+|+++|||.||++|++++ |+++++++| +||+.| | ++||+.+| +|
T Consensus 142 ~~~~l~~~~~~~g~~~~i~~s~~~-~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~ia-fGDs~N-D-leMl~~ag~~g 217 (413)
T PLN02382 142 VIKELSERLEKRGLDVKIIYSGGI-DLDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLV-CGDSGN-D-AELFSVPDVYG 217 (413)
T ss_pred HHHHHHHHHHhcCCcEEEEEECCc-EEEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEE-EeCCHH-H-HHHHhcCCCCE
Confidence 234455555554566788888886 9999999999999999999999 999999999 777777 7 99999999 89
Q ss_pred EEecCccccccccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHHHhCcc
Q 002660 839 VILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLL 893 (895)
Q Consensus 839 VaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~~li 893 (895)
|||+||. .++|..+.+. ...++. .+.+++++++||++||+||+|+
T Consensus 218 vam~NA~--~elk~~a~~~-------~~~~~~-~~~a~~~~~~GI~~al~~f~l~ 262 (413)
T PLN02382 218 VMVSNAQ--EELLQWYAEN-------AKDNPK-IIHATERCAAGIIQAIGHFNLG 262 (413)
T ss_pred EEEcCCc--HHHHHHHHhh-------ccCCCc-EEEcCCCCccHHHHHHHHhCCC
Confidence 9999999 6667654330 111222 2356788999999999999987
No 65
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.97 E-value=1.5e-29 Score=282.83 Aligned_cols=283 Identities=30% Similarity=0.443 Sum_probs=226.7
Q ss_pred CCCcEEEeccc-cchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEe
Q 002660 143 VWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 221 (895)
Q Consensus 143 ~~pDvVh~h~~-~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~ 221 (895)
.+||+||+|+. ...+.+..+++..++|++++.|+.......... +.+. .++..+..+|.+++
T Consensus 92 ~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~---------------~~~~--~~~~~~~~~d~ii~ 154 (377)
T cd03798 92 FRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR---------------LLRA--LLRRALRRADAVIA 154 (377)
T ss_pred CCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh---------------hHHH--HHHHHHhcCCeEEe
Confidence 68999999975 456666777788899999999987654321100 1111 24567899999999
Q ss_pred CChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchh
Q 002660 222 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 301 (895)
Q Consensus 222 ~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (895)
.|+...+.+...+ .. ..++.++|||+|...+.+.....
T Consensus 155 ~s~~~~~~~~~~~--~~---------------------~~~~~~i~~~~~~~~~~~~~~~~------------------- 192 (377)
T cd03798 155 VSEALADELKALG--ID---------------------PEKVTVIPNGVDTERFSPADRAE------------------- 192 (377)
T ss_pred CCHHHHHHHHHhc--CC---------------------CCceEEcCCCcCcccCCCcchHH-------------------
Confidence 9998877765542 11 12899999999998887543110
Q ss_pred HHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCC
Q 002660 302 SEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDL 380 (895)
Q Consensus 302 ~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l 380 (895)
. .+.....+++.++++|++.+.||++.++++++.+.+. .+++.+ ++|.++. ...+...++++++
T Consensus 193 ~--~~~~~~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~--~~~~~l~i~g~~~~-----------~~~~~~~~~~~~~ 257 (377)
T cd03798 193 A--RKLGLPEDKKVILFVGRLVPRKGIDYLIEALARLLKK--RPDVHLVIVGDGPL-----------REALEALAAELGL 257 (377)
T ss_pred H--HhccCCCCceEEEEeccCccccCHHHHHHHHHHHHhc--CCCeEEEEEcCCcc-----------hHHHHHHHHhcCC
Confidence 0 1122345678999999999999999999999998643 445555 6777654 2445566778888
Q ss_pred CCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHH
Q 002660 381 YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQS 460 (895)
Q Consensus 381 ~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~ 460 (895)
.++|.+.|+++.+++..+|+.| |++++|+..|++|++++|||+||+|||+++.|+..+++.++.+|++++++|+++
T Consensus 258 ~~~v~~~g~~~~~~~~~~~~~a----d~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~ 333 (377)
T cd03798 258 EDRVTFLGAVPHEEVPAYYAAA----DVFVLPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVPPGDPEA 333 (377)
T ss_pred cceEEEeCCCCHHHHHHHHHhc----CeeecchhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEECCCCHHH
Confidence 8999999999999999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHHcc
Q 002660 461 VADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAGC 505 (895)
Q Consensus 461 la~ai~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~~~ 505 (895)
++++|.+++++++. ++..++++.+ ++|+|+.+++++.++++++
T Consensus 334 l~~~i~~~~~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l 377 (377)
T cd03798 334 LAEAILRLLADPWL--RLGRAARRRVAERFSWENVAERLLELYREV 377 (377)
T ss_pred HHHHHHHHhcCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHhhC
Confidence 99999999999887 6777777777 6999999999999998753
No 66
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.97 E-value=4.1e-31 Score=283.64 Aligned_cols=245 Identities=12% Similarity=0.108 Sum_probs=156.5
Q ss_pred CeEEEEEecCCCC---cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeec
Q 002660 612 KHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 688 (895)
Q Consensus 612 ~kli~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~ 688 (895)
.|+|++|+||||. +.+++.++++|++++++ |+.|+|||||++.++.++++++++.. ..+++||+||+.|++.
T Consensus 3 ~kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~----G~~~~iaTGR~~~~~~~~~~~l~~~~-~~~~~I~~NGa~i~~~ 77 (270)
T PRK10513 3 IKLIAIDMDGTLLLPDHTISPAVKQAIAAARAK----GVNVVLTTGRPYAGVHRYLKELHMEQ-PGDYCITNNGALVQKA 77 (270)
T ss_pred eEEEEEecCCcCcCCCCccCHHHHHHHHHHHHC----CCEEEEecCCChHHHHHHHHHhCCCC-CCCeEEEcCCeEEEEC
Confidence 5899999999993 56889999999999998 59999999999999999999999841 1258999999999964
Q ss_pred cCCCC--CCCcccchh-h-HHHhhc-c-----cCcc-------hHHHHHHhhhhhccccccccCCcccccccccCCceEE
Q 002660 689 TLNSE--DGPFVVDFY-Y-HSHIEY-R-----WGGE-------GLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCY 751 (895)
Q Consensus 689 ~~~~~--~~~~~~~~~-~-~~~i~~-~-----~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 751 (895)
..... ...+..+.. . ...... . +..+ ...... .......... .....+.+........|+
T Consensus 78 ~~~~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~k~ 154 (270)
T PRK10513 78 ADGETVAQTALSYDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYT-VHESFLTGIP--LVFREVEKMDPNLQFPKV 154 (270)
T ss_pred CCCCEEEecCCCHHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhH-HHhhhhccCC--ccccchhhccccCCceEE
Confidence 21110 000100000 0 000000 0 0000 000000 0000000000 000000000001123343
Q ss_pred EEEeeCCCCCccHHHHHHHHHh-ccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccc
Q 002660 752 AFSVQKPGMTPPVKELRKVLRI-QALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEG 830 (895)
Q Consensus 752 ~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~e 830 (895)
.+. .++ ..++++.+.+.. ....+.++.+.+. ++||+|+|+|||+||++|++++||++++++| +||+.| | ++
T Consensus 155 ~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~s~~~-~~eI~~~gvsKg~al~~l~~~~gi~~~~v~a-fGD~~N-D-i~ 226 (270)
T PRK10513 155 MMI-DEP---EILDAAIARIPAEVKERYTVLKSAPY-FLEILDKRVNKGTGVKSLAEHLGIKPEEVMA-IGDQEN-D-IA 226 (270)
T ss_pred EEe-CCH---HHHHHHHHHhHHHhcCcEEEEEecCe-eEEEeCCCCChHHHHHHHHHHhCCCHHHEEE-ECCchh-h-HH
Confidence 332 111 122344344432 2234667777775 9999999999999999999999999999999 777777 7 99
Q ss_pred cccCcceEEEecCccccccccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHHHhC
Q 002660 831 LLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLG 891 (895)
Q Consensus 831 Ml~~ag~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~~ 891 (895)
||+.+|+||||+||. +++|+.|++ ||.++++|||+++|++|.
T Consensus 227 Ml~~ag~~vAm~NA~--~~vK~~A~~-----------------vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 227 MIEYAGVGVAMGNAI--PSVKEVAQF-----------------VTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred HHHhCCceEEecCcc--HHHHHhcCe-----------------eccCCCcchHHHHHHHHh
Confidence 999999999999999 555666555 999999999999999985
No 67
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.97 E-value=5.3e-31 Score=281.63 Aligned_cols=234 Identities=17% Similarity=0.163 Sum_probs=157.5
Q ss_pred cCeEEEEEecCCC---CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEee
Q 002660 611 RKHIFVISVDCDS---TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYY 687 (895)
Q Consensus 611 ~~kli~~DiDGTL---~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~ 687 (895)
..|+|++|||||| .+.+++.++++|++++++ |+.|+|||||++..+.++++++++. .++||+||++|++
T Consensus 2 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~~~~~----g~~v~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~i~~ 73 (264)
T COG0561 2 MIKLLAFDLDGTLLDSNKTISPETKEALARLREK----GVKVVLATGRPLPDVLSILEELGLD----GPLITFNGALIYN 73 (264)
T ss_pred CeeEEEEcCCCCccCCCCccCHHHHHHHHHHHHC----CCEEEEECCCChHHHHHHHHHcCCC----ccEEEeCCeEEec
Confidence 3689999999999 356899999999999998 6999999999999999999999984 3799999999998
Q ss_pred ccCCCCCCCcccchhhHHHhhcccCcchHHHHHHhhhhh---cccccccc-----------CC--------c-ccccccc
Q 002660 688 STLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQ---VTDKKAES-----------GE--------K-VLTPAEQ 744 (895)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~-----------~~--------~-~~~~~~~ 744 (895)
.+. .. ....+..+.+..++...... ........ .. . .......
T Consensus 74 ~~~------~i--------~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (264)
T COG0561 74 GGE------LL--------FQKPLSREDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAE 139 (264)
T ss_pred CCc------EE--------eeecCCHHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhh
Confidence 731 11 01111112222222111100 00000000 00 0 0000000
Q ss_pred cCCceEEEEEeeCCCCCccHHHHHHHHHhccC--eEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecC
Q 002660 745 LSTNYCYAFSVQKPGMTPPVKELRKVLRIQAL--RCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGE 822 (895)
Q Consensus 745 ~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd 822 (895)
....++...... .....++.+.+..... ...+..+.+. ++||+|+|+|||.||++|+++||++++++|| +||
T Consensus 140 -~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~s~~~-~lei~~~g~~K~~al~~l~~~lgi~~~~v~a-fGD 213 (264)
T COG0561 140 -LEDNKIIALDKD---HEILEELVEALRKRFPDLGLTVSSSGPI-SLDITPKGVSKGYALQRLAKLLGIKLEEVIA-FGD 213 (264)
T ss_pred -cCcceEEEEecC---hHhHHHHHHHHhhhccccceEEEEcCCc-eEEEecCCCchHHHHHHHHHHhCCCHHHeEE-eCC
Confidence 000111111111 1233455555554322 3444444443 5999999999999999999999999999999 777
Q ss_pred CCCCCccccccCcceEEEecCccccccccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHHHhCcc
Q 002660 823 SGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLL 893 (895)
Q Consensus 823 ~nn~D~~eMl~~ag~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~~li 893 (895)
+.| | ++||+.+|+|||||||. ++.|+.|++ +|.++++|||+++|+++.++
T Consensus 214 ~~N-D-~~Ml~~ag~gvam~Na~--~~~k~~A~~-----------------vt~~n~~~Gv~~~l~~~~~~ 263 (264)
T COG0561 214 STN-D-IEMLEVAGLGVAMGNAD--EELKELADY-----------------VTTSNDEDGVAEALEKLLLL 263 (264)
T ss_pred ccc-c-HHHHHhcCeeeeccCCC--HHHHhhCCc-----------------ccCCccchHHHHHHHHHhcc
Confidence 777 7 99999999999999998 555666554 99999999999999999875
No 68
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.97 E-value=3.4e-31 Score=284.27 Aligned_cols=242 Identities=14% Similarity=0.143 Sum_probs=159.4
Q ss_pred CeEEEEEecCCC---CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeec
Q 002660 612 KHIFVISVDCDS---TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 688 (895)
Q Consensus 612 ~kli~~DiDGTL---~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~ 688 (895)
.|||++|+|||| .+.+++.++++|++++++ |+.|+|||||++.++.+++++++++ +++||+||+.|++.
T Consensus 2 ~kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~----G~~~~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~I~~~ 73 (272)
T PRK15126 2 ARLAAFDMDGTLLMPDHHLGEKTLSTLARLRER----DITLTFATGRHVLEMQHILGALSLD----AYLITGNGTRVHSL 73 (272)
T ss_pred ccEEEEeCCCcCcCCCCcCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHcCCC----CcEEecCCcEEEcC
Confidence 589999999999 356899999999999998 5999999999999999999999983 47999999999964
Q ss_pred cCCCCCCCcccchhhHHHhhcc--------------cCc-chHHHHHHhhhhhccccccccCCcccccccccCCceEEEE
Q 002660 689 TLNSEDGPFVVDFYYHSHIEYR--------------WGG-EGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAF 753 (895)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~i~~~--------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 753 (895)
..................+... |.. .................. ...+.+. .....+|+.+
T Consensus 74 ~~~~l~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~ki~~ 148 (272)
T PRK15126 74 EGELLHRQDLPADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQ----LIDLKRL-PAHGVTKICF 148 (272)
T ss_pred CCCEEEeecCCHHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceE----EecHHHc-cccCceEEEE
Confidence 3211000000000000001000 000 000000000000000000 0000000 0123455544
Q ss_pred EeeCCCCCccHHHHHHHHHhc-cCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccc
Q 002660 754 SVQKPGMTPPVKELRKVLRIQ-ALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLL 832 (895)
Q Consensus 754 ~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl 832 (895)
.. ++ ..++++.+.+... ...+.++.+.+. ++||+|+|+|||+||++|++++||++++++| +||+.| | ++||
T Consensus 149 ~~-~~---~~~~~~~~~l~~~~~~~~~~~~s~~~-~~eI~~~g~sKg~al~~l~~~~gi~~~~v~a-fGD~~N-D-i~Ml 220 (272)
T PRK15126 149 CG-DH---DDLTRLQIQLNEALGERAHLCFSATD-CLEVLPVGCNKGAALAVLSQHLGLSLADCMA-FGDAMN-D-REML 220 (272)
T ss_pred EC-CH---HHHHHHHHHHHHHhcCCEEEEEcCCc-EEEeecCCCChHHHHHHHHHHhCCCHHHeEE-ecCCHH-H-HHHH
Confidence 32 22 2334555555432 334666777665 9999999999999999999999999999999 777777 7 9999
Q ss_pred cCcceEEEecCccccccccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHHHhC
Q 002660 833 GGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLG 891 (895)
Q Consensus 833 ~~ag~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~~ 891 (895)
+.+|+|||||||. +++|..|++ ..||.++++|||+++|++|-
T Consensus 221 ~~ag~~vAm~Na~--~~vK~~A~~---------------~~v~~~n~edGva~~l~~~~ 262 (272)
T PRK15126 221 GSVGRGFIMGNAM--PQLRAELPH---------------LPVIGHCRNQAVSHYLTHWL 262 (272)
T ss_pred HHcCCceeccCCh--HHHHHhCCC---------------CeecCCCcchHHHHHHHHHh
Confidence 9999999999999 666666653 13788999999999999874
No 69
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.97 E-value=1.4e-29 Score=265.72 Aligned_cols=233 Identities=21% Similarity=0.382 Sum_probs=170.4
Q ss_pred EEEEEecCCCCcc---hhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeeccC
Q 002660 614 IFVISVDCDSTTG---LLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTL 690 (895)
Q Consensus 614 li~~DiDGTL~~~---~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~~ 690 (895)
||++|+||||... +++.+ ++++ +++ +|+.|++||||++.++.++++.+++. .||++||+||+.|++..
T Consensus 1 li~~DlDgTLl~~~~~~~~~~-~~~~-~~~----~gi~~viaTGR~~~~v~~~~~~l~l~--~~~~~I~~nGa~i~~~~- 71 (236)
T TIGR02471 1 LIITDLDNTLLGDDEGLASFV-ELLR-GSG----DAVGFGIATGRSVESAKSRYAKLNLP--SPDVLIARVGTEIYYGP- 71 (236)
T ss_pred CeEEeccccccCCHHHHHHHH-HHHH-hcC----CCceEEEEeCCCHHHHHHHHHhCCCC--CCCEEEECCCceEEeCC-
Confidence 5899999999532 33333 4544 344 47999999999999999999999983 47899999999998754
Q ss_pred CCCCCCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEEEeeCCCCCccHHHHHHH
Q 002660 691 NSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKV 770 (895)
Q Consensus 691 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~ 770 (895)
....+..|...+...|....+...+...++...+. ......+++.|... ++....++++.+.
T Consensus 72 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~i~~~~~-~~~~~~~~~~~~~ 133 (236)
T TIGR02471 72 -----ELQPDRFWQKHIDHDWRRQAVVEALADIPGLTLQD------------DQEQGPFKISYLLD-PEGEPILPQIRQR 133 (236)
T ss_pred -----CCCCChhHHHHHhcCCCHHHHHHHHhcCCCcEeCC------------hhcCCCeeEEEEEC-cccchHHHHHHHH
Confidence 22334557666666776544444333332211111 11234677777653 3322345566677
Q ss_pred HHhccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEecCccccccc
Q 002660 771 LRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSN 850 (895)
Q Consensus 771 l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgNa~~~~~~ 850 (895)
+......+.++.+.+. ++||+|+++|||.||++|++++|++++++++ +||+.| | ++||+.+|+||||+||. .++
T Consensus 134 l~~~~~~~~~~~~~~~-~~ei~~~~~~K~~al~~l~~~~g~~~~~~i~-~GD~~n-D-~~ml~~~~~~iav~na~--~~~ 207 (236)
T TIGR02471 134 LRQQSQAAKVILSCGW-FLDVLPLRASKGLALRYLSYRWGLPLEQILV-AGDSGN-D-EEMLRGLTLGVVVGNHD--PEL 207 (236)
T ss_pred HHhccCCEEEEEECCc-eEEEeeCCCChHHHHHHHHHHhCCCHHHEEE-EcCCcc-H-HHHHcCCCcEEEEcCCc--HHH
Confidence 7665555677777775 8999999999999999999999999999999 667677 7 99999999999999999 666
Q ss_pred cccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHHHhCc
Q 002660 851 QIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGL 892 (895)
Q Consensus 851 ~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~~l 892 (895)
|..++. ...|||++.+++||+++|++|++
T Consensus 208 k~~a~~-------------~~~~v~~~~~~~Gv~~~i~~~~~ 236 (236)
T TIGR02471 208 EGLRHQ-------------QRIYFANNPHAFGILEGINHYDF 236 (236)
T ss_pred HHhhcC-------------CcEEEcCCCChhHHHHHHHhhCC
Confidence 666552 12268999999999999999985
No 70
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.97 E-value=8.4e-29 Score=276.81 Aligned_cols=265 Identities=18% Similarity=0.209 Sum_probs=196.8
Q ss_pred CCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhH---HHHHH-HhhccHHHHHhhhhhhHHHHHHHhhhcccCE
Q 002660 143 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKL---EQLLK-QARLSRDEINATYKIMRRIEAEELSLDASEI 218 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~ 218 (895)
.++|+||++..... ..+....++|.+.+.|+.....+ ..... .+...........+..++ .|+..++.+|.
T Consensus 82 ~~~D~v~~~~~~~~---~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~ 156 (351)
T cd03804 82 SGYDLVISSSHAVA---KGVITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRI--WDRRSAARVDY 156 (351)
T ss_pred cCCCEEEEcCcHHh---ccccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHH--HHHHHhcCCCE
Confidence 57999998764221 12224568999999997532211 11111 111111111112222232 36677999999
Q ss_pred EEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 002660 219 VITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDP 298 (895)
Q Consensus 219 vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~ 298 (895)
|+++|+...+.+.+.+.. +..+||||+|.+.|.+..
T Consensus 157 ii~~S~~~~~~~~~~~~~-------------------------~~~vi~~~~d~~~~~~~~------------------- 192 (351)
T cd03804 157 FIANSRFVARRIKKYYGR-------------------------DATVIYPPVDTDRFTPAE------------------- 192 (351)
T ss_pred EEECCHHHHHHHHHHhCC-------------------------CcEEECCCCCHhhcCcCC-------------------
Confidence 999999888877554432 568999999998876421
Q ss_pred chhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhc
Q 002660 299 PIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY 378 (895)
Q Consensus 299 ~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~ 378 (895)
...++++++||+.+.||++.+++|++.+. .++ +++|+++.. .++.+
T Consensus 193 ------------~~~~~il~~G~~~~~K~~~~li~a~~~~~-----~~l-~ivG~g~~~-----------~~l~~----- 238 (351)
T cd03804 193 ------------EKEDYYLSVGRLVPYKRIDLAIEAFNKLG-----KRL-VVIGDGPEL-----------DRLRA----- 238 (351)
T ss_pred ------------CCCCEEEEEEcCccccChHHHHHHHHHCC-----CcE-EEEECChhH-----------HHHHh-----
Confidence 23567999999999999999999999873 344 578887642 22222
Q ss_pred CCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCH
Q 002660 379 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQ 458 (895)
Q Consensus 379 ~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~ 458 (895)
+..++|.|+|+++.+++.++|+.| |++|+||. |+||++++||||||+|||+++.||..|++.++.+|++++++|+
T Consensus 239 ~~~~~V~~~g~~~~~~~~~~~~~a----d~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~ 313 (351)
T cd03804 239 KAGPNVTFLGRVSDEELRDLYARA----RAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQTV 313 (351)
T ss_pred hcCCCEEEecCCCHHHHHHHHHhC----CEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEeCCCCH
Confidence 445789999999999999999999 99999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHH
Q 002660 459 QSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTY 498 (895)
Q Consensus 459 ~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~~ 498 (895)
++++++|.+++++++ .++++.++.+++|+|+++.+++
T Consensus 314 ~~la~~i~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 350 (351)
T cd03804 314 ESLAAAVERFEKNED---FDPQAIRAHAERFSESRFREKI 350 (351)
T ss_pred HHHHHHHHHHHhCcc---cCHHHHHHHHHhcCHHHHHHHh
Confidence 999999999999884 2334455555789999988765
No 71
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=99.97 E-value=1.5e-29 Score=287.17 Aligned_cols=313 Identities=15% Similarity=0.133 Sum_probs=232.6
Q ss_pred CcEEEeccccchhHHHHHhccC-CCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCC
Q 002660 145 PVAIHGHYADAGDSAALLSGAL-NVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITST 223 (895)
Q Consensus 145 pDvVh~h~~~~~~~~~~~~~~~-~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s 223 (895)
-|+|.+|.+...+++..+.+.. ..++.+..|-.++..- ++. ...+... -...+-.||.|...|
T Consensus 128 ~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlHipfP~~e--~f~-----------~lp~r~~---il~gll~~dligF~t 191 (456)
T TIGR02400 128 GDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFPSSE--IYR-----------TLPWRRE---LLEGLLAYDLVGFQT 191 (456)
T ss_pred CCEEEEecchhhHHHHHHHhhCCCCeEEEEEeCCCCChH--HHh-----------hCCcHHH---HHHHHhcCCEEEECC
Confidence 4899999998888888887664 4688899997654321 110 0111111 224678999999999
Q ss_pred hHHHHHHHhhhcCCChHHHHHHHHhH-hccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhH
Q 002660 224 RQEIEEQWRLYDGFDPVLERKLRARI-KRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 302 (895)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~l~~~~-~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (895)
...++.+.... .+.|+.+. ..++...|+.. ++.++|||||++.|.+..... .......
T Consensus 192 ~~~~~~Fl~~~-------~~~l~~~~~~~~~~~~g~~~-~v~viP~GID~~~f~~~~~~~-------------~~~~~~~ 250 (456)
T TIGR02400 192 YDDARNFLSAV-------SRELGLETLPNGVESGGRTV-RVGAFPIGIDVDRFAEQAKKP-------------SVQKRIA 250 (456)
T ss_pred HHHHHHHHHHH-------HHHhCCcccCCceEECCcEE-EEEEecCcCCHHHHHHHhcCh-------------hHHHHHH
Confidence 98887765432 22333222 34566556655 899999999999997543111 0111111
Q ss_pred HhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEE-EE-----ecCCCccccccchHHHHHHHHHH
Q 002660 303 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IM-----GNRDGIDEMSSTSASVLLSVLKL 374 (895)
Q Consensus 303 ~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~--~l~l-iv-----G~~~~~~~~~~~~~~~~~~l~~~ 374 (895)
.++..+ +++++|+++||+++.||++.+++||+.+.+..+.. ++++ ++ |+++.++.+++..++..++++..
T Consensus 251 ~lr~~~--~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~ 328 (456)
T TIGR02400 251 ELRESL--KGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGR 328 (456)
T ss_pred HHHHHc--CCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhc
Confidence 222222 47789999999999999999999999987555543 3443 33 34455566666666666666666
Q ss_pred HHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCC----EEEcCCCCchhccccCCCe
Q 002660 375 IDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLP----IVATKNGGPVDIHRVLDNG 450 (895)
Q Consensus 375 ~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~P----Vvas~~gg~~eiv~~~~~g 450 (895)
.+..++.+.+++.+.++.+++.++|+.| ||+|+||.+||||++++||||||+| +|+|..+|..+.+. +|
T Consensus 329 ~~~~~~~pv~~l~~~~~~~el~aly~aa----Dv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l~---~g 401 (456)
T TIGR02400 329 FGTLDWTPIRYLNRSYDREELMALYRAA----DVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN---GA 401 (456)
T ss_pred cCCCCCccEEEEcCCCCHHHHHHHHHhC----cEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChHHhC---Cc
Confidence 6677777888889999999999999999 9999999999999999999999999 88888777766663 79
Q ss_pred EEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 002660 451 LLVDPHDQQSVADALLKLVA-DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 451 ~lv~p~d~~~la~ai~~ll~-~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~ 503 (895)
++|+|+|++++|++|.++++ ++++++++.+..++.+.+||+..|+++|++.+.
T Consensus 402 llVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 402 LLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWREDFLSDLN 455 (456)
T ss_pred EEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 99999999999999999999 557788888889999988999999999998764
No 72
>PLN02887 hydrolase family protein
Probab=99.97 E-value=6.1e-30 Score=293.38 Aligned_cols=237 Identities=12% Similarity=0.080 Sum_probs=157.6
Q ss_pred cccCeEEEEEecCCC---CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCC-------EEE
Q 002660 609 RRRKHIFVISVDCDS---TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFD-------AFI 678 (895)
Q Consensus 609 ~~~~kli~~DiDGTL---~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d-------~~I 678 (895)
+-..|+||+|||||| .+.+++.++++|++++++ |+.|+|||||++.++.++++++++. .++ ++|
T Consensus 305 ~~~iKLIa~DLDGTLLn~d~~Is~~t~eAI~kl~ek----Gi~~vIATGR~~~~i~~~l~~L~l~--~~~~~I~~~~p~I 378 (580)
T PLN02887 305 KPKFSYIFCDMDGTLLNSKSQISETNAKALKEALSR----GVKVVIATGKARPAVIDILKMVDLA--GKDGIISESSPGV 378 (580)
T ss_pred ccCccEEEEeCCCCCCCCCCccCHHHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHhCcc--cccceEeecccEE
Confidence 446799999999999 356899999999999998 5999999999999999999999873 123 356
Q ss_pred EcCCceEeeccCCCCCCCcccchhhHHHhhcccCcchHHHHHHhh---------------------------hhhccccc
Q 002660 679 CNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRW---------------------------ASQVTDKK 731 (895)
Q Consensus 679 ~~nGa~I~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---------------------------~~~~~~~~ 731 (895)
|+||+.|++..++.. .... +..+.+.+++... ........
T Consensus 379 ~~NGA~I~d~~g~~I-~~~~------------L~~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~ 445 (580)
T PLN02887 379 FLQGLLVYGRQGREI-YRSN------------LDQEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPK 445 (580)
T ss_pred eecCeEEEECCCcEE-EEEe------------CCHHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhcccc
Confidence 779999986432110 0000 0001111111000 00000000
Q ss_pred cccCCcccccccccCCceEEEEEeeCCCCCccHHHHHHHHHh-ccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhC
Q 002660 732 AESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRI-QALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWG 810 (895)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~g 810 (895)
......+.+........|+.+.. .++ ...+.+.+.+.. ....+.++.+.+. ++||+|+|+|||.||++||+++|
T Consensus 446 -~~~i~~l~~~~~~~~i~Ki~~~~-~~e--~~~~~l~~~l~~~~~~~~~v~~S~~~-~lEI~p~gvSKG~ALk~L~e~lG 520 (580)
T PLN02887 446 -AEIMSSVDQLLAAADIQKVIFLD-TAE--GVSSVLRPYWSEATGDRANVVQAQPD-MLEIVPPGTSKGNGVKMLLNHLG 520 (580)
T ss_pred -ccccCCHHHhhcccCeeEEEEEc-ChH--HHHHHHHHHHHHHhcCcEEEEEecCc-EEEEecCCCCHHHHHHHHHHHcC
Confidence 00000000000011234444332 111 112234444432 2345777888776 99999999999999999999999
Q ss_pred CCcccEEEEecCCCCCCccccccCcceEEEecCccccccccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHHHh
Q 002660 811 VELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQL 890 (895)
Q Consensus 811 i~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~ 890 (895)
|+++++|| +||+.| | ++||+.+|+|||||||. +++|+.|++ ||.++++|||+++|++|
T Consensus 521 I~~eeviA-FGDs~N-D-IeMLe~AG~gVAMgNA~--eeVK~~Ad~-----------------VT~sNdEDGVA~aLek~ 578 (580)
T PLN02887 521 VSPDEIMA-IGDGEN-D-IEMLQLASLGVALSNGA--EKTKAVADV-----------------IGVSNDEDGVADAIYRY 578 (580)
T ss_pred CCHHHEEE-Eecchh-h-HHHHHHCCCEEEeCCCC--HHHHHhCCE-----------------EeCCCCcCHHHHHHHHh
Confidence 99999999 666667 7 99999999999999999 555666555 99999999999999987
Q ss_pred C
Q 002660 891 G 891 (895)
Q Consensus 891 ~ 891 (895)
-
T Consensus 579 ~ 579 (580)
T PLN02887 579 A 579 (580)
T ss_pred h
Confidence 3
No 73
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.97 E-value=1.6e-28 Score=282.25 Aligned_cols=281 Identities=18% Similarity=0.199 Sum_probs=210.4
Q ss_pred CCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeC
Q 002660 143 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 222 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~ 222 (895)
.++||+|++.......+ .+.....+|.++++|+...... ....... .+. ..+.......+.+|.||++
T Consensus 210 ~~~di~i~dr~~~~~~~-~~~~~~~~~~v~~lH~~h~~~~-------~~~~~~~--~~~--~~y~~~~~~~~~~D~iI~~ 277 (500)
T TIGR02918 210 TKKDIIILDRSTGIGQA-VLENKGPAKLGVVVHAEHFSES-------ATNETYI--LWN--NYYEYQFSNADYIDFFITA 277 (500)
T ss_pred CCCCEEEEcCCcccchH-HHhcCCCceEEEEEChhhhcCc-------cCcchhH--HHH--HHHHHHHhchhhCCEEEEC
Confidence 56999999876322222 3445558999999997432111 0000000 010 1110011246788999999
Q ss_pred ChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhH
Q 002660 223 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 302 (895)
Q Consensus 223 s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (895)
|+...+.+...++. ++.+..++.+||+|++...+.+..
T Consensus 278 S~~~~~~l~~~~~~-------------------~~~~~~ki~viP~g~~~~~~~~~~----------------------- 315 (500)
T TIGR02918 278 TDIQNQILKNQFKK-------------------YYNIEPRIYTIPVGSLDELQYPEQ----------------------- 315 (500)
T ss_pred CHHHHHHHHHHhhh-------------------hcCCCCcEEEEcCCCcccccCccc-----------------------
Confidence 98777766554432 112223899999998755443211
Q ss_pred HhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCC
Q 002660 303 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY 381 (895)
Q Consensus 303 ~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~ 381 (895)
...+..|+++||+.+.||++.+|+|+..+.+ ..+++.+ ++|+|+. ..++.++++.+++.
T Consensus 316 -------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~--~~p~~~l~i~G~G~~-----------~~~l~~~i~~~~l~ 375 (500)
T TIGR02918 316 -------ERKPFSIITASRLAKEKHIDWLVKAVVKAKK--SVPELTFDIYGEGGE-----------KQKLQKIINENQAQ 375 (500)
T ss_pred -------ccCCeEEEEEeccccccCHHHHHHHHHHHHh--hCCCeEEEEEECchh-----------HHHHHHHHHHcCCC
Confidence 1234679999999999999999999999864 3345554 7898864 35677888889999
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCC-CchhccccCCCeEEeCCC----
Q 002660 382 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG-GPVDIHRVLDNGLLVDPH---- 456 (895)
Q Consensus 382 ~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~g-g~~eiv~~~~~g~lv~p~---- 456 (895)
++|.|.|+. ++.++|+.| |++|+||..||||++++||||||+|||+++.+ |+.|+|.++.+|++++++
T Consensus 376 ~~V~f~G~~---~~~~~~~~a----dv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~ 448 (500)
T TIGR02918 376 DYIHLKGHR---NLSEVYKDY----ELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEED 448 (500)
T ss_pred CeEEEcCCC---CHHHHHHhC----CEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCcccc
Confidence 999999963 799999999 99999999999999999999999999999986 899999999999999743
Q ss_pred C----HHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcc
Q 002660 457 D----QQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGC 505 (895)
Q Consensus 457 d----~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~ 505 (895)
| ++++|++|.++++ ++.++++++++++.+++|||+.++++|.++++++
T Consensus 449 d~~~~~~~la~~I~~ll~-~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~~~ 500 (500)
T TIGR02918 449 DEDQIITALAEKIVEYFN-SNDIDAFHEYSYQIAEGFLTANIIEKWKKLVREV 500 (500)
T ss_pred chhHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 3 8899999999994 5678999999999889999999999999998764
No 74
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.97 E-value=4.4e-28 Score=268.64 Aligned_cols=336 Identities=23% Similarity=0.245 Sum_probs=240.8
Q ss_pred CCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCcccc
Q 002660 28 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIA 107 (895)
Q Consensus 28 ~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~~~~ 107 (895)
.||.++++.+++++|.+.| |+|++++........... ..... .......
T Consensus 11 ~gG~~~~~~~l~~~l~~~g--~~v~v~~~~~~~~~~~~~----------------------~~~~~--~~~~~~~----- 59 (353)
T cd03811 11 GGGAERVLLNLANGLDKRG--YDVTLVVLRDEGDYLELL----------------------PSNVK--LIPVRVL----- 59 (353)
T ss_pred CCCcchhHHHHHHHHHhcC--ceEEEEEcCCCCcccccc----------------------ccchh--hhceeee-----
Confidence 7899999999999999999 999999875432111000 00000 0000000
Q ss_pred cccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccc-cchhHHHHHhccCCCCEEEEeCCCchhhHHHHH
Q 002660 108 KELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLL 186 (895)
Q Consensus 108 ~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~-~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~ 186 (895)
.........+...+...+.. .+||+||+|.. ....++....+. ++|++++.|+..........
T Consensus 60 -~~~~~~~~~~~~~~~~~~~~--------------~~~dii~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~ 123 (353)
T cd03811 60 -KLKSLRDLLAILRLRRLLRK--------------EKPDVVISHLTTTPNVLALLAARL-GTKLIVWEHNSLSLELKRKL 123 (353)
T ss_pred -ecccccchhHHHHHHHHHHh--------------cCCCEEEEcCccchhHHHHHHhhc-CCceEEEEcCcchhhhccch
Confidence 00000111122222222222 67999999987 454444444443 89999999998654321110
Q ss_pred HHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEe
Q 002660 187 KQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAII 266 (895)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vi 266 (895)
... ..++..+..+|.+++.|+...+.+...+.. +..++.+|
T Consensus 124 ---------------~~~--~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~----------------------~~~~~~vi 164 (353)
T cd03811 124 ---------------RLL--LLIRKLYRRADKIVAVSEGVKEDLLKLLGI----------------------PPDKIEVI 164 (353)
T ss_pred ---------------hHH--HHHHhhccccceEEEeccchhhhHHHhhcC----------------------CccccEEe
Confidence 000 235567999999999999888777665532 11289999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc
Q 002660 267 PPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELAN 346 (895)
Q Consensus 267 p~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~ 346 (895)
|||+|...+.+..... . ......++++++++||+.+.||++.+++|+..+.+. .++
T Consensus 165 ~~~~~~~~~~~~~~~~---------------------~-~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~--~~~ 220 (353)
T cd03811 165 YNPIDIEEIRALAEEP---------------------L-ELGIPPDGPVILAVGRLSPQKGFDTLIRAFALLRKE--GPD 220 (353)
T ss_pred cCCcChhhcCcccchh---------------------h-hcCCCCCceEEEEEecchhhcChHHHHHHHHHhhhc--CCC
Confidence 9999998876533110 0 112245678999999999999999999999999753 334
Q ss_pred EEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHH
Q 002660 347 LTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEA 425 (895)
Q Consensus 347 l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea 425 (895)
+.+ ++|.++. ...+...+.++++.++|.+.|. .+++.++|+.| |++|+||..|++|++++||
T Consensus 221 ~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~~----d~~i~ps~~e~~~~~~~Ea 283 (353)
T cd03811 221 ARLVILGDGPL-----------REELEALAKELGLADRVHFLGF--QSNPYPYLKAA----DLFVLSSRYEGFPNVLLEA 283 (353)
T ss_pred ceEEEEcCCcc-----------HHHHHHHHHhcCCCccEEEecc--cCCHHHHHHhC----CEEEeCcccCCCCcHHHHH
Confidence 443 6787764 2445577888899999999999 46899999999 9999999999999999999
Q ss_pred HHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHH---HHHHHHHHhCHHHHHHHHHHHHHHh-hcCC
Q 002660 426 AAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSV---ADALLKLVADKQLWARCRQNGLKNI-HLFS 490 (895)
Q Consensus 426 ~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~l---a~ai~~ll~~~~~~~~~~~~~~~~~-~~~s 490 (895)
|+||+|||+++.|+..|++.++.+|++++++|.+++ .++|..++++++.+++++.++++.+ ++|+
T Consensus 284 ~~~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (353)
T cd03811 284 MALGTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALALLDLLLDPELRERLAAAARERVAREYS 352 (353)
T ss_pred HHhCCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999 7777788889999999999777777 5775
No 75
>PLN02275 transferase, transferring glycosyl groups
Probab=99.97 E-value=4.7e-28 Score=271.92 Aligned_cols=333 Identities=15% Similarity=0.128 Sum_probs=220.4
Q ss_pred chhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCcccccc
Q 002660 30 GQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKE 109 (895)
Q Consensus 30 G~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~~~~~~ 109 (895)
|.+..+..++..|+++|+ ++|+|+|.....+ ..+. ....|++++++|. +. ......
T Consensus 16 g~~~r~~~~~~~l~~~~~-~~v~vi~~~~~~~--------~~~~-------------~~~~~v~v~r~~~-~~-~~~~~~ 71 (371)
T PLN02275 16 GRSPRMQYHALSLARQAS-FQVDVVAYGGSEP--------IPAL-------------LNHPSIHIHLMVQ-PR-LLQRLP 71 (371)
T ss_pred CCCHHHHHHHHHHHhcCC-ceEEEEEecCCCC--------CHHH-------------hcCCcEEEEECCC-cc-cccccc
Confidence 455678888889998873 4799998642111 0011 1124899999986 32 111111
Q ss_pred cCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEecccc---chhHHHHHhccCCCCEEEEeCCCchhhHHHHH
Q 002660 110 LLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYAD---AGDSAALLSGALNVPMLFTGHSLGRDKLEQLL 186 (895)
Q Consensus 110 ~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~---~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~ 186 (895)
.++..+ .++......+..+...+.. +..+||+||+|... ....+..+++..++|+|++.|+++... .
T Consensus 72 ~~~~~~-~~~~~~~~~~~~~~~~~~~-----~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~----~ 141 (371)
T PLN02275 72 RVLYAL-ALLLKVAIQFLMLLWFLCV-----KIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYTL----L 141 (371)
T ss_pred cchHHH-HHHHHHHHHHHHHHHHHHh-----hCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHHH----H
Confidence 122200 0111111111111111100 12689999998742 244566677778999999999985221 1
Q ss_pred HHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEe
Q 002660 187 KQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAII 266 (895)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vi 266 (895)
..+.... ....++..++ |+..++.+|.|+++|+...+.+.+.+ |. ++.+|
T Consensus 142 ~~~~~~~---~~~~~~~~~~--e~~~~~~ad~ii~~S~~~~~~l~~~~----------------------g~---~i~vi 191 (371)
T PLN02275 142 ALSLGRS---HPLVRLYRWY--ERHYGKMADGHLCVTKAMQHELDQNW----------------------GI---RATVL 191 (371)
T ss_pred hcccCCC---CHHHHHHHHH--HHHHHhhCCEEEECCHHHHHHHHHhc----------------------CC---CeEEE
Confidence 1121111 1122233443 77789999999999998777654322 11 37899
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc-----
Q 002660 267 PPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPL----- 341 (895)
Q Consensus 267 p~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~----- 341 (895)
|||+ .+.|.+..... . ...+...+++++||+.+.||++.+++|+..+..+
T Consensus 192 ~n~~-~~~f~~~~~~~-----------------------~-~~~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~ 246 (371)
T PLN02275 192 YDQP-PEFFRPASLEI-----------------------R-LRPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARL 246 (371)
T ss_pred CCCC-HHHcCcCCchh-----------------------c-ccCCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhcc
Confidence 9995 46665432110 0 0112345788999999999999999999887310
Q ss_pred ----------cCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEe-CCCCCCCCHHHHHHHhhcCCcEE
Q 002660 342 ----------RELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAY-PKHHKQSDVPEIYRLAAKTKGVF 409 (895)
Q Consensus 342 ----------~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~-~g~~~~~el~~ly~~A~~~~dv~ 409 (895)
...+++.+ ++|+|+. .+++.++++++++.+ +.| .++++.++++.+|+.| |++
T Consensus 247 ~~~~~~~~~~~~~~~i~l~ivG~G~~-----------~~~l~~~~~~~~l~~-v~~~~~~~~~~~~~~~l~~a----Dv~ 310 (371)
T PLN02275 247 NESDSASGKQSLYPRLLFIITGKGPQ-----------KAMYEEKISRLNLRH-VAFRTMWLEAEDYPLLLGSA----DLG 310 (371)
T ss_pred ccccccccccccCCCeEEEEEeCCCC-----------HHHHHHHHHHcCCCc-eEEEcCCCCHHHHHHHHHhC----CEE
Confidence 12355664 8899985 356778888899876 665 5578999999999999 999
Q ss_pred EecC---CCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHH
Q 002660 410 INPA---FIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLV 469 (895)
Q Consensus 410 v~ps---~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll 469 (895)
|+|+ ..|+||++++||||||+|||+++.||..|++.++.+|++++ |+++++++|.+++
T Consensus 311 v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~la~~i~~l~ 371 (371)
T PLN02275 311 VSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDGKNGLLFS--SSSELADQLLELL 371 (371)
T ss_pred EEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccCCCCeEEEC--CHHHHHHHHHHhC
Confidence 9863 24899999999999999999999999999999999999996 6999999998875
No 76
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.97 E-value=1.4e-28 Score=279.24 Aligned_cols=276 Identities=16% Similarity=0.219 Sum_probs=216.9
Q ss_pred CCCcEEEecccc-chhHHHHHhccCCCC-EEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEE
Q 002660 143 VWPVAIHGHYAD-AGDSAALLSGALNVP-MLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVI 220 (895)
Q Consensus 143 ~~pDvVh~h~~~-~~~~~~~~~~~~~ip-~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi 220 (895)
.++|++|+++.. .++.+..+.+..+.+ +|.+.|+..... ... ...+.. ..+..++.+|.|+
T Consensus 126 ~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~--~~~----------~~~~~~-----~~~~~~~~~d~ii 188 (407)
T cd04946 126 GQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYE--DRY----------PSGYIP-----LRRYLLSSLDAVF 188 (407)
T ss_pred cCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhh--hhc----------cccchH-----HHHHHHhcCCEEE
Confidence 567899997653 344444566666665 999999764211 000 001111 1234588999999
Q ss_pred eCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCch
Q 002660 221 TSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPI 300 (895)
Q Consensus 221 ~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (895)
++|+...+.+...|+.. .+++.++|+|++...+.+..
T Consensus 189 ~~S~~~~~~l~~~~~~~----------------------~~ki~vi~~gv~~~~~~~~~--------------------- 225 (407)
T cd04946 189 PCSEQGRNYLQKRYPAY----------------------KEKIKVSYLGVSDPGIISKP--------------------- 225 (407)
T ss_pred ECCHHHHHHHHHHCCCc----------------------cccEEEEECCcccccccCCC---------------------
Confidence 99998888776655432 23899999999987665321
Q ss_pred hHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcC
Q 002660 301 WSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYD 379 (895)
Q Consensus 301 ~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~ 379 (895)
...+.+.|+++||+.+.||++.+++|+..+.+..+..++.+ ++|+|+. ...+..++...+
T Consensus 226 --------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~-----------~~~l~~~~~~~~ 286 (407)
T cd04946 226 --------SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPL-----------EDTLKELAESKP 286 (407)
T ss_pred --------CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchH-----------HHHHHHHHHhcC
Confidence 12456789999999999999999999999976555456654 6788764 345666777777
Q ss_pred CCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCC-CH
Q 002660 380 LYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPH-DQ 458 (895)
Q Consensus 380 l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~-d~ 458 (895)
..++|.|+|+++.+++.++|+.+ ..|++++||..||+|++++||||||+|||+|+.||..|++.++.+|+++++. |+
T Consensus 287 ~~~~V~f~G~v~~~e~~~~~~~~--~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~ 364 (407)
T cd04946 287 ENISVNFTGELSNSEVYKLYKEN--PVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSKDPTP 364 (407)
T ss_pred CCceEEEecCCChHHHHHHHhhc--CCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEeCCCCCH
Confidence 78899999999999999999863 0189999999999999999999999999999999999999998899999864 89
Q ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHH
Q 002660 459 QSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYL 499 (895)
Q Consensus 459 ~~la~ai~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~ 499 (895)
++++++|.+++++++.++++++++++.+ ++|||+.+.++|.
T Consensus 365 ~~la~~I~~ll~~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 365 NELVSSLSKFIDNEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 9999999999999999999999999999 6999999998875
No 77
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.96 E-value=1.8e-27 Score=267.79 Aligned_cols=271 Identities=13% Similarity=0.072 Sum_probs=195.4
Q ss_pred CCCcEEEeccc-cchhH--HHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhh-cccCE
Q 002660 143 VWPVAIHGHYA-DAGDS--AALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSL-DASEI 218 (895)
Q Consensus 143 ~~pDvVh~h~~-~~~~~--~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l-~~ad~ 218 (895)
..|||||.+.+ ..++. |..++++++ |+|.++|.....+...+ ..+.+... .+++.+++ .. .+||.
T Consensus 433 f~PDVVHLatP~~LGw~~~Glr~ArKl~-PVVasyHTny~eYl~~y-~~g~L~~~----llk~l~~~-----v~r~hcD~ 501 (794)
T PLN02501 433 KDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKRE-KNGALQAF----FVKHINNW-----VTRAYCHK 501 (794)
T ss_pred cCCCEEEECCchhhccHHHHHHHHHHcC-CeEEEEeCCcHHHHhHh-cchhHHHH----HHHHHHHH-----HHHhhCCE
Confidence 77999999987 56777 888999999 99999999877643332 21221111 11122221 11 12899
Q ss_pred EEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 002660 219 VITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDP 298 (895)
Q Consensus 219 vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~ 298 (895)
|+++|.... .+ . . ++....+|||.+.|.|.....
T Consensus 502 VIaPS~atq-~L-~---~-------------------------~vI~nVnGVDte~F~P~~r~~---------------- 535 (794)
T PLN02501 502 VLRLSAATQ-DL-P---K-------------------------SVICNVHGVNPKFLKIGEKVA---------------- 535 (794)
T ss_pred EEcCCHHHH-Hh-c---c-------------------------cceeecccccccccCCcchhH----------------
Confidence 999996443 21 0 0 222222699999998754211
Q ss_pred chhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCccccccchHHHHHHHHHHHHh
Q 002660 299 PIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDK 377 (895)
Q Consensus 299 ~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~-livG~~~~~~~~~~~~~~~~~~l~~~~~~ 377 (895)
..++++.....+.++|+||+.+.||++.||+|+..+... .+++. +|+|+|+. ..++..++.+
T Consensus 536 ----~~r~lgi~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~--~pnvrLvIVGDGP~-----------reeLe~la~e 598 (794)
T PLN02501 536 ----EERELGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNE--LDGFNLDVFGNGED-----------AHEVQRAAKR 598 (794)
T ss_pred ----HHHhcCCccccCceEEEEcccccCCHHHHHHHHHHHHhh--CCCeEEEEEcCCcc-----------HHHHHHHHHH
Confidence 112333333445689999999999999999999988532 34555 48899986 3456677777
Q ss_pred cCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCC
Q 002660 378 YDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHD 457 (895)
Q Consensus 378 ~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d 457 (895)
+++ .|.|+|. .++...+|+.+ ||||+||..|+||++++||||||+|||+++.+|. +++.++.+|+++ .|
T Consensus 599 LgL--~V~FLG~--~dd~~~lyasa----DVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll~--~D 667 (794)
T PLN02501 599 LDL--NLNFLKG--RDHADDSLHGY----KVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLTY--KT 667 (794)
T ss_pred cCC--EEEecCC--CCCHHHHHHhC----CEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEec--CC
Confidence 776 4889998 56778899999 9999999999999999999999999999999985 446677788765 69
Q ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 002660 458 QQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 458 ~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~ 503 (895)
+++++++|.++++++.....+. ....|||+..++++++.-+
T Consensus 668 ~EafAeAI~~LLsd~~~rl~~~-----a~~~~SWeAaadrLle~~~ 708 (794)
T PLN02501 668 SEDFVAKVKEALANEPQPLTPE-----QRYNLSWEAATQRFMEYSD 708 (794)
T ss_pred HHHHHHHHHHHHhCchhhhHHH-----HHhhCCHHHHHHHHHHhhc
Confidence 9999999999999876433222 2348999999999997643
No 78
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.96 E-value=3.9e-28 Score=271.38 Aligned_cols=451 Identities=18% Similarity=0.166 Sum_probs=291.8
Q ss_pred eeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCC-C-----
Q 002660 4 NNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTP-R----- 77 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~-~----- 77 (895)
|||++++.--. +=..+||..-.+..|.++|+++| ++|.|+.+.+. .+...+....+.... .
T Consensus 1 M~Il~v~~E~~---------p~vK~GGLaDv~~alpk~L~~~g--~~v~v~lP~y~--~~~~~~~~~~~~~~~~~~~~~~ 67 (487)
T COG0297 1 MKILFVASEIF---------PFVKTGGLADVVGALPKALAKRG--VDVRVLLPSYP--KVQKEWRDLLKVVGKFGVLKGG 67 (487)
T ss_pred Ccceeeeeeec---------CccccCcHHHHHHHhHHHHHhcC--CeEEEEcCCch--hhhhhhccccceeeEeeeeecc
Confidence 79999884443 12589999999999999999999 99999988764 222222111111000 0
Q ss_pred -CCCcccccCCCCCCeEEEecCCCCCCccccc--ccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEecccc
Q 002660 78 -NSDDFMDDMGESSGAYIIRIPFGPKDKYIAK--ELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYAD 154 (895)
Q Consensus 78 -~~~~~~~~~~~~~gv~i~~i~~~~~~~~~~~--~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~ 154 (895)
.....-+......++.+.-+... .+..+ ...+.+.+...+.. . +......+..... -. ..|||||+|+|.
T Consensus 68 ~~~~~~~~~~~~~~~v~~~lid~~---~~f~r~~~~~~~~~d~~~Rf~-~-F~~a~~~~~~~~~-~~-~~pDIvH~hDWq 140 (487)
T COG0297 68 RAQLFIVKEYGKDGGVDLYLIDNP---ALFKRPDSTLYGYYDNAERFA-F-FSLAAAELAPLGL-IS-WLPDIVHAHDWQ 140 (487)
T ss_pred cceEEEEEeecccCCCcEEEecCh---hhcCccccccCCCCcHHHHHH-H-HHHHHHHHhhhcC-CC-CCCCEEEeecHH
Confidence 00000000000111333333311 22222 12233322211111 0 1111111111000 01 479999999999
Q ss_pred chhHHHHHhc----cCCCCEEEEeCCCchhhHHHHHHHhh--ccHHHHH-hhhhhhHHHHHHHhhhcccCEEEeCChHHH
Q 002660 155 AGDSAALLSG----ALNVPMLFTGHSLGRDKLEQLLKQAR--LSRDEIN-ATYKIMRRIEAEELSLDASEIVITSTRQEI 227 (895)
Q Consensus 155 ~~~~~~~~~~----~~~ip~v~t~H~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~ 227 (895)
++++..+++. ...+|.|+|+|++..+.......... ++..... ....+...+..++..+..||.|.++|+..+
T Consensus 141 t~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSptYa 220 (487)
T COG0297 141 TGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADAVTTVSPTYA 220 (487)
T ss_pred HHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccEEEEECHHHH
Confidence 9999999988 44799999999986654322111111 1111111 000011222346778999999999999999
Q ss_pred HHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCchhHHhhh
Q 002660 228 EEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPAS-PDPPIWSEIMR 306 (895)
Q Consensus 228 ~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 306 (895)
++++ .+.+....+..++.+. .++.-|-||||.+.+.|....-.. ..+..+..+ ..........+
T Consensus 221 ~Ei~--t~~~g~gl~g~l~~~~-----------~~l~GI~NgiD~~~wnp~~d~~~~--~~y~~~~~~~k~~nk~~L~~~ 285 (487)
T COG0297 221 GEIY--TPEYGEGLEGLLSWRS-----------GKLSGILNGIDYDLWNPETDPYIA--ANYSAEVLPAKAENKVALQER 285 (487)
T ss_pred Hhhc--cccccccchhhhhhcc-----------ccEEEEEeeEEecccCcccccchh--ccCCccchhhhHHHHHHHHHH
Confidence 9886 3444444444443332 288999999999999886543211 111111111 11222233444
Q ss_pred hcCC--CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcE
Q 002660 307 FFTN--PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQV 384 (895)
Q Consensus 307 ~~~~--~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v 384 (895)
++.+ .+.|++.++||+..+||++.+++++..+.+. ...+ +++|.++ ..+.+.+..+.+++.. ++
T Consensus 286 ~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~--~~~~-vilG~gd---------~~le~~~~~la~~~~~--~~ 351 (487)
T COG0297 286 LGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQ--GWQL-VLLGTGD---------PELEEALRALASRHPG--RV 351 (487)
T ss_pred hCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHh--CceE-EEEecCc---------HHHHHHHHHHHHhcCc--eE
Confidence 5544 3569999999999999999999999999743 3444 5778883 4566788888888765 56
Q ss_pred EeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhcccc--------CCCeEEeCCC
Q 002660 385 AYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV--------LDNGLLVDPH 456 (895)
Q Consensus 385 ~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~--------~~~g~lv~p~ 456 (895)
.+.-..+..-...+|..| |++++||++||+|++-++||+.|+++|+..+||.+|.|.+ ..+|+++.+.
T Consensus 352 ~~~i~~~~~la~~i~aga----D~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~ 427 (487)
T COG0297 352 LVVIGYDEPLAHLIYAGA----DVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQT 427 (487)
T ss_pred EEEeeecHHHHHHHHhcC----CEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecC
Confidence 665555555566777778 9999999999999999999999999999999999999875 4789999999
Q ss_pred CHHHHHHHHHHHHh---CHHH-HHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccCCC
Q 002660 457 DQQSVADALLKLVA---DKQL-WARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPRH 509 (895)
Q Consensus 457 d~~~la~ai~~ll~---~~~~-~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~~~~~ 509 (895)
++++++.+|.+++. .++. |+.+..+++. ..|||+..+.+|.++|+.++...
T Consensus 428 ~~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~--~d~sw~~sa~~y~~lY~~~~~~~ 482 (487)
T COG0297 428 NPDHLANALRRALVLYRAPPLLWRKVQPNAMG--ADFSWDLSAKEYVELYKPLLSKP 482 (487)
T ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHhhcc--cccCchhHHHHHHHHHHHHhccc
Confidence 99999999999986 4554 8888887776 79999999999999999987654
No 79
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.96 E-value=5.4e-29 Score=266.48 Aligned_cols=244 Identities=13% Similarity=0.112 Sum_probs=157.2
Q ss_pred ccCeEEEEEecCCCC---cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEe
Q 002660 610 RRKHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLY 686 (895)
Q Consensus 610 ~~~kli~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~ 686 (895)
..+|+||+||||||. +.+++.++++|++++++ |+.|+|||||++..+.+++++++++ .+++||+||+.|+
T Consensus 5 ~~~~lI~~DlDGTLL~~~~~i~~~~~~ai~~l~~~----Gi~~viaTGR~~~~i~~~~~~l~~~---~~~~I~~NGa~I~ 77 (271)
T PRK03669 5 QDPLLIFTDLDGTLLDSHTYDWQPAAPWLTRLREA----QVPVILCSSKTAAEMLPLQQTLGLQ---GLPLIAENGAVIQ 77 (271)
T ss_pred CCCeEEEEeCccCCcCCCCcCcHHHHHHHHHHHHc----CCeEEEEcCCCHHHHHHHHHHhCCC---CCcEEEeCCCEEE
Confidence 467899999999993 45678899999999998 5999999999999999999999983 2479999999999
Q ss_pred eccCCCCCCCcccchhhHHHhhcccCcchHHHHHHhhhhh-cccccc-----------ccCCc-ccccccc-cCCceEEE
Q 002660 687 YSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQ-VTDKKA-----------ESGEK-VLTPAEQ-LSTNYCYA 752 (895)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~-----------~~~~~-~~~~~~~-~~~~~k~~ 752 (895)
............ .+ ......+.+..++...... ...... ..... ....... .....++.
T Consensus 78 ~~~~~~~~~~~~---~~----~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (271)
T PRK03669 78 LDEQWQDHPDFP---RI----ISGISHGEIRQVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLI 150 (271)
T ss_pred ecCcccCCCCce---Ee----ecCCCHHHHHHHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeE
Confidence 753211000000 00 0001111122222111000 000000 00000 0000000 00122222
Q ss_pred EEeeCCCCCccHHHHHHHHHhccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCC---CcccEEEEecCCCCCCcc
Q 002660 753 FSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGV---ELSKMVVFVGESGDTDYE 829 (895)
Q Consensus 753 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi---~~~~viaf~Gd~nn~D~~ 829 (895)
+. . . .....++.+.+... .+.++. .+. ++||+|+++|||+||++|++++|+ +++++|| +||+.| | +
T Consensus 151 ~~-~-~--~~~~~~~~~~l~~~--~~~~~~-~~~-~iEi~~~g~sKg~al~~l~~~lgi~~~~~~~via-fGDs~N-D-i 219 (271)
T PRK03669 151 WR-D-S--DERMAQFTARLAEL--GLQFVQ-GAR-FWHVLDASAGKDQAANWLIATYQQLSGTRPTTLG-LGDGPN-D-A 219 (271)
T ss_pred ec-C-C--HHHHHHHHHHHHHC--CCEEEe-cCe-eEEEecCCCCHHHHHHHHHHHHHhhcCCCceEEE-EcCCHH-H-H
Confidence 21 1 1 12334556666542 355554 344 899999999999999999999999 9999999 777777 7 9
Q ss_pred ccccCcceEEEecCccccccccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHHHhC
Q 002660 830 GLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLG 891 (895)
Q Consensus 830 eMl~~ag~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~~ 891 (895)
+||+.+|+||||||+.+..+ -++..+..++|+|...++|||+++|+||.
T Consensus 220 ~Ml~~ag~gvAM~~~~~~~~-------------~l~~~~~~~~~~~~~~~~~g~~~~l~~~~ 268 (271)
T PRK03669 220 PLLDVMDYAVVVKGLNREGV-------------HLQDDDPARVYRTQREGPEGWREGLDHFF 268 (271)
T ss_pred HHHHhCCEEEEecCCCCCCc-------------ccccccCCceEeccCCCcHHHHHHHHHHH
Confidence 99999999999999872221 11223667889999999999999999973
No 80
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.96 E-value=8.8e-29 Score=259.10 Aligned_cols=225 Identities=17% Similarity=0.135 Sum_probs=153.7
Q ss_pred CeEEEEEecCCCC---cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeec
Q 002660 612 KHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 688 (895)
Q Consensus 612 ~kli~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~ 688 (895)
.|+|++|+||||. ..+++.++++|++++++ |+.|+|||||++..+.++++.++++ +++||+||+.|+..
T Consensus 3 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~----G~~~~iaTGR~~~~~~~~~~~l~~~----~~~i~~nGa~i~~~ 74 (230)
T PRK01158 3 IKAIAIDIDGTITDKDRRLSLKAVEAIRKAEKL----GIPVILATGNVLCFARAAAKLIGTS----GPVIAENGGVISVG 74 (230)
T ss_pred eeEEEEecCCCcCCCCCccCHHHHHHHHHHHHC----CCEEEEEcCCchHHHHHHHHHhCCC----CcEEEecCeEEEEc
Confidence 4899999999993 55789999999999987 5999999999999999999999983 57999999999975
Q ss_pred cCCCCCCCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEEEeeCCCCCccHHHHH
Q 002660 689 TLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELR 768 (895)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~ 768 (895)
... ... +...+. ....++........... ..+...........+. ... . ...+++.
T Consensus 75 ~~~----~~~----~~~~~~------~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~~-~---~~~~~~~ 130 (230)
T PRK01158 75 FDG----KRI----FLGDIE------ECEKAYSELKKRFPEAS-----TSLTKLDPDYRKTEVA-LRR-T---VPVEEVR 130 (230)
T ss_pred CCC----CEE----EEcchH------HHHHHHHHHHHhccccc-----eeeecCCcccccceee-ecc-c---ccHHHHH
Confidence 211 111 000010 11111111111000000 0000000000011111 111 1 1234555
Q ss_pred HHHHhccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEecCccccc
Q 002660 769 KVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSS 848 (895)
Q Consensus 769 ~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgNa~~~~ 848 (895)
+.+......+.++.+ .. ++||+|+++|||.|+++|++++|++++++++ +||+.| | ++||+.+|+||||+||. +
T Consensus 131 ~~l~~~~~~~~~~~~-~~-~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~-~GD~~N-D-i~m~~~ag~~vam~Na~--~ 203 (230)
T PRK01158 131 ELLEELGLDLEIVDS-GF-AIHIKSPGVNKGTGLKKLAELMGIDPEEVAA-IGDSEN-D-LEMFEVAGFGVAVANAD--E 203 (230)
T ss_pred HHHHHcCCcEEEEec-ce-EEEEeeCCCChHHHHHHHHHHhCCCHHHEEE-ECCchh-h-HHHHHhcCceEEecCcc--H
Confidence 555544434444444 33 8999999999999999999999999999999 777777 7 99999999999999999 5
Q ss_pred cccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHHHhCc
Q 002660 849 SNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGL 892 (895)
Q Consensus 849 ~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~~l 892 (895)
++|+.| ++||.++++|||+++|++|.|
T Consensus 204 ~vk~~a-----------------~~v~~~n~~~Gv~~~l~~~~~ 230 (230)
T PRK01158 204 ELKEAA-----------------DYVTEKSYGEGVAEAIEHLLL 230 (230)
T ss_pred HHHHhc-----------------ceEecCCCcChHHHHHHHHhC
Confidence 555554 459999999999999999865
No 81
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=99.96 E-value=7.9e-30 Score=274.10 Aligned_cols=247 Identities=35% Similarity=0.529 Sum_probs=173.2
Q ss_pred CcceeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCC-------Ce---eEEEEeecCccCCCCCCCCCCc
Q 002660 1 MIFNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMP-------GV---YRVDLLTRQVSAPDVDWSYGEP 70 (895)
Q Consensus 1 ~~~m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G-------~~---h~V~v~t~~~~~~~~~~~y~~~ 70 (895)
|++ +|+++|+||++++.++ +|| ||||||..||+++|++|.+.+ |+ -+|.++|+.+.+.. ...+.++
T Consensus 271 mvf-~vvliSpHG~f~q~nv-LG~-pDTGGQVvYVleqarALe~e~~~ri~~~gl~i~p~i~i~TRlIpd~~-~t~~~q~ 346 (550)
T PF00862_consen 271 MVF-NVVLISPHGYFGQENV-LGR-PDTGGQVVYVLEQARALENEMLYRIKLQGLDITPKIDIVTRLIPDAK-GTTCNQR 346 (550)
T ss_dssp --S-EEEEE--SS--STTST-TSS-TTSSHHHHHHHHHHHHHHHHTHHHHHHTT-----EEEEEEE--TBTT-CGGGTSS
T ss_pred eeE-EEEEEcCccccccccc-cCC-CCCCCcEEEEeHHHHHHHHHHHHHHHhcCCCCCCceeeecccccCCc-CCCcccc
Confidence 777 9999999999999999 999 999999999999999998642 11 36999999876543 2344444
Q ss_pred ccccCCCCCCcccccCCCCCCeEEEecCCCCC----CcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCc
Q 002660 71 TEMLTPRNSDDFMDDMGESSGAYIIRIPFGPK----DKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPV 146 (895)
Q Consensus 71 ~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~----~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pD 146 (895)
.|.+ ..+++++|+|+||++. ++|++++.+|||+.+|++.+...+.... +.+||
T Consensus 347 le~~------------~gt~~a~IlRvPF~~~~gi~~kwisrf~lWPyLe~fa~d~~~~i~~e~-----------~~~Pd 403 (550)
T PF00862_consen 347 LEKV------------SGTENARILRVPFGPEKGILRKWISRFDLWPYLEEFADDAEREILAEL-----------QGKPD 403 (550)
T ss_dssp EEEE------------TTESSEEEEEE-ESESTEEE-S---GGG-GGGHHHHHHHHHHHHHHHH-----------TS--S
T ss_pred cccc------------CCCCCcEEEEecCCCCcchhhhccchhhchhhHHHHHHHHHHHHHHHh-----------CCCCc
Confidence 4433 4467899999999985 3699999999999999998877765421 25799
Q ss_pred EEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHH
Q 002660 147 AIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQE 226 (895)
Q Consensus 147 vVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~ 226 (895)
+||+||.+++++|.+++.++|+|++++.|+++..++. .+.+.+..+...|++..++.+|..+++.||.||++|.++
T Consensus 404 lI~GnYsDgnlvA~LLs~~lgv~~~~iaHsLek~Ky~----~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST~QE 479 (550)
T PF00862_consen 404 LIIGNYSDGNLVASLLSRKLGVTQCFIAHSLEKTKYE----DSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITSTYQE 479 (550)
T ss_dssp EEEEEHHHHHHHHHHHHHHHT-EEEEE-SS-HHHHHH----TTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESSHHH
T ss_pred EEEeccCcchHHHHHHHhhcCCceehhhhcccccccc----ccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcchHh
Confidence 9999999999999999999999999999999998865 366688899999999999999999999999999999999
Q ss_pred HHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCC
Q 002660 227 IEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQD 279 (895)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~ 279 (895)
++.++..++.|.....-.++. ..+.|...+++.+|+.++|||+|.+.|-|-.
T Consensus 480 I~g~~~~~gqyes~~~ftlpg-Lyrvv~Gi~vFdPkfNiv~PGad~~iyFpyt 531 (550)
T PF00862_consen 480 IAGQKDTVGQYESHKAFTLPG-LYRVVNGIDVFDPKFNIVSPGADESIYFPYT 531 (550)
T ss_dssp HHB-SSSBHTTGGGSSEEETT-TEEEEES--TT-TTEEE------TTTS--TT
T ss_pred hcCCccccCCccchhhcchHh-HHhhhccccccCCcccccCCCCCcceecCCc
Confidence 998655444443321111111 5678888999999999999999999988765
No 82
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.96 E-value=6e-29 Score=259.47 Aligned_cols=218 Identities=14% Similarity=0.151 Sum_probs=149.4
Q ss_pred EEEEecCCCC---cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeeccCC
Q 002660 615 FVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTLN 691 (895)
Q Consensus 615 i~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~~~ 691 (895)
|++|+||||. ..+++.++++|++++++ |+.|+|||||++.++.++++.+++ ++++||+||+.|++.+..
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~----Gi~~~~aTGR~~~~~~~~~~~l~~----~~~~i~~nGa~i~~~~~~ 72 (225)
T TIGR01482 1 IASDIDGTLTDPNRAINESALEAIRKAESV----GIPVVLVTGNSVQFARALAKLIGT----PDPVIAENGGEISYNEGM 72 (225)
T ss_pred CeEeccCccCCCCcccCHHHHHHHHHHHHC----CCEEEEEcCCchHHHHHHHHHhCC----CCeEEEecCcEEEeCCCC
Confidence 5899999993 45788999999999998 599999999999999999999987 468999999999976421
Q ss_pred CCCCCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEEEeeCCCCCccHHHHHHHH
Q 002660 692 SEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVL 771 (895)
Q Consensus 692 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l 771 (895)
. ..|...+...|............... .. .........++.+. . ..+.+...+
T Consensus 73 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----------~~~~~~~~~~~~~~----~---~~~~~~~~~ 125 (225)
T TIGR01482 73 D--------DIFLAYLEEEWFLDIVIAKTFPFSRL--KV----------QYPRRASLVKMRYG----I---DVDTVREII 125 (225)
T ss_pred c--------eEEecccCHHHHHHHHHhcccchhhh--cc----------ccccccceEEEeec----C---CHHHHHHHH
Confidence 0 11111111111111000000000000 00 00001112222221 1 112333333
Q ss_pred HhccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEecCcccccccc
Q 002660 772 RIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQ 851 (895)
Q Consensus 772 ~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgNa~~~~~~~ 851 (895)
......+.+. +.+. ++||+|+++|||.||++|++++|++++++++ +||+.| | ++||+.+|+||||+||. +++|
T Consensus 126 ~~~~~~~~~~-~~~~-~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~-~GD~~N-D-i~m~~~ag~~vam~Na~--~~~k 198 (225)
T TIGR01482 126 KELGLNLVAV-DSGF-DIHILPQGVNKGVAVKKLKEKLGIKPGETLV-CGDSEN-D-IDLFEVPGFGVAVANAQ--PELK 198 (225)
T ss_pred HhcCceEEEe-cCCc-EEEEeeCCCCHHHHHHHHHHHhCCCHHHEEE-ECCCHh-h-HHHHHhcCceEEcCChh--HHHH
Confidence 3333333333 4454 8999999999999999999999999999999 777777 8 99999999999999999 5556
Q ss_pred ccccCCCCCCCCCcCCCCceEEccCcCChHH----HHHHHHHhC
Q 002660 852 IHANRSYPLSDVMPIDSPNIVQTPEDCTTSD----IRSSLEQLG 891 (895)
Q Consensus 852 ~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dG----I~~al~~~~ 891 (895)
..|++ ||.++++|| |+++|++||
T Consensus 199 ~~A~~-----------------vt~~~~~~G~~~~v~~~l~~~~ 225 (225)
T TIGR01482 199 EWADY-----------------VTESPYGEGGAEAIGEILQAIG 225 (225)
T ss_pred HhcCe-----------------ecCCCCCCcHHHHHHHHHHhhC
Confidence 66555 999999999 999999987
No 83
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=99.96 E-value=1.1e-28 Score=282.65 Aligned_cols=312 Identities=14% Similarity=0.092 Sum_probs=216.6
Q ss_pred CCcEEEeccccchhHHHHHhcc-CCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeC
Q 002660 144 WPVAIHGHYADAGDSAALLSGA-LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 222 (895)
Q Consensus 144 ~pDvVh~h~~~~~~~~~~~~~~-~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~ 222 (895)
..|+|++|.+....++..+.++ ...|+++..|-.++..- ++. .++ .... -...+-.+|.|...
T Consensus 131 ~~d~iwihDyhl~llp~~lr~~~~~~~i~~f~HipfP~~e--~~~--~lp---------~~~~---ll~~~l~~D~igF~ 194 (460)
T cd03788 131 PGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFPSSE--IFR--CLP---------WREE---LLRGLLGADLIGFQ 194 (460)
T ss_pred CCCEEEEeChhhhHHHHHHHhhCCCCeEEEEEeCCCCChH--HHh--hCC---------ChHH---HHHHHhcCCEEEEC
Confidence 4699999998777777776654 35899999997765431 110 000 0011 11245569999999
Q ss_pred ChHHHHHHHhhhcCCChHHHHHHHHhH--hccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCch
Q 002660 223 TRQEIEEQWRLYDGFDPVLERKLRARI--KRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPI 300 (895)
Q Consensus 223 s~~~~~~~~~~~~~~~~~~~~~l~~~~--~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (895)
+...+..++.... +.++... ..++.+.|+.. ++.+||||||++.|.+..... ..
T Consensus 195 t~~~~~~Fl~~~~-------~~l~~~~~~~~~i~~~g~~~-~i~vip~GID~~~f~~~~~~~----------------~~ 250 (460)
T cd03788 195 TERYARNFLSCCS-------RLLGLEVTDDGGVEYGGRRV-RVGAFPIGIDPDAFRKLAASP----------------EV 250 (460)
T ss_pred CHHHHHHHHHHHH-------HHcCCcccCCceEEECCEEE-EEEEEeCeEcHHHHHHHhcCc----------------hh
Confidence 9877666554321 1111111 13455555544 799999999999997543111 11
Q ss_pred hHHh-hhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEE-EEecC-----CCccccccchHHHHHHH
Q 002660 301 WSEI-MRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNR-----DGIDEMSSTSASVLLSV 371 (895)
Q Consensus 301 ~~~~-~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~--~l~l-ivG~~-----~~~~~~~~~~~~~~~~l 371 (895)
.... ......+++++|+++||+++.||++.+|+|++.+.+..+.+ ++++ ++|.+ +.++.++++..+..+++
T Consensus 251 ~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~i 330 (460)
T cd03788 251 QERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRI 330 (460)
T ss_pred HHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHH
Confidence 1111 11223467899999999999999999999999987544443 3444 45433 22222322222222223
Q ss_pred HHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCC----EEEcCCCCchhccccC
Q 002660 372 LKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLP----IVATKNGGPVDIHRVL 447 (895)
Q Consensus 372 ~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~P----Vvas~~gg~~eiv~~~ 447 (895)
+...+..++.+.+++.|.++.+++.++|+.| |++|+||..||||++++||||||+| ||+|+.+|..+. +
T Consensus 331 n~~~g~~~~~~v~~~~g~v~~~el~~~y~~a----Dv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---~ 403 (460)
T cd03788 331 NGKFGTLDWTPVRYLYRSLPREELAALYRAA----DVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE---L 403 (460)
T ss_pred HhccCCCCceeEEEEeCCCCHHHHHHHHHhc----cEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh---c
Confidence 2222223355666778899999999999999 9999999999999999999999999 888888777776 4
Q ss_pred CCeEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Q 002660 448 DNGLLVDPHDQQSVADALLKLVADK-QLWARCRQNGLKNIHLFSWPEHCKTYLSRI 502 (895)
Q Consensus 448 ~~g~lv~p~d~~~la~ai~~ll~~~-~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~ 502 (895)
.+|++++|+|+++++++|.++++++ ++++.+++++++.+++|||..|+++|++.+
T Consensus 404 ~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~l 459 (460)
T cd03788 404 SGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDL 459 (460)
T ss_pred CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHhh
Confidence 6899999999999999999999955 677888888888889999999999998765
No 84
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=99.96 E-value=5.1e-28 Score=271.97 Aligned_cols=314 Identities=12% Similarity=0.077 Sum_probs=235.0
Q ss_pred CcEEEeccccchhHHHHHhcc-CCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCC
Q 002660 145 PVAIHGHYADAGDSAALLSGA-LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITST 223 (895)
Q Consensus 145 pDvVh~h~~~~~~~~~~~~~~-~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s 223 (895)
-|+|..|.+...+++..+.++ ...++-|.+|-.++..- ++. .++ +.+. -...+-.||.|-.-|
T Consensus 133 ~d~vWVhDYhL~llp~~LR~~~~~~~IgfFlHiPFPs~e--ifr--~LP---------~r~~---ll~glL~aDliGFqt 196 (487)
T TIGR02398 133 GATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTPFPSAD--VFN--ILP---------WREQ---IIGSLLCCDYIGFHI 196 (487)
T ss_pred CCEEEEecchhhHHHHHHHHhCCCCeEEEEeeCCCCChH--HHh--hCC---------chHH---HHHHHhcCCeEEeCC
Confidence 479999998777788777664 35788889998765431 110 001 1111 224677999999999
Q ss_pred hHHHHHHHhhhcCCChHHHHHHHHhH----------------------hccccccCCCCCCEEEeCCCCCCCCCCCCCCC
Q 002660 224 RQEIEEQWRLYDGFDPVLERKLRARI----------------------KRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGD 281 (895)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~l~~~~----------------------~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~ 281 (895)
...++.+.... .+.|+.+. .-+|.+.|+.+ ++.++|+|||++.|.+....
T Consensus 197 ~~y~~~Fl~~~-------~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v-~v~~~PiGID~~~f~~~~~~ 268 (487)
T TIGR02398 197 PRYVENFVDAA-------RGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVV-KLGAHPVGTDPERIRSALAA 268 (487)
T ss_pred HHHHHHHHHHH-------HHHhCCccccccccccccccccccccccccccceeECCEEE-EEEEEECEecHHHHHHHhcC
Confidence 88877765532 22333221 11366667776 89999999999999754311
Q ss_pred CCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEE-EEecC----
Q 002660 282 MDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNR---- 354 (895)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~--~l~l-ivG~~---- 354 (895)
. ........+++.+ .++++|+++||+++.||+..+|+||+++.+.+|.+ ++++ ++|..
T Consensus 269 ~-------------~~~~~~~~lr~~~--~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr~~ 333 (487)
T TIGR02398 269 A-------------SIREMMERIRSEL--AGVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAASG 333 (487)
T ss_pred c-------------hHHHHHHHHHHHc--CCceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCccc
Confidence 1 1112222333322 37899999999999999999999999997666655 4554 34433
Q ss_pred -CCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCC---
Q 002660 355 -DGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGL--- 430 (895)
Q Consensus 355 -~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~--- 430 (895)
+.|++++++.++..++||+...+.++.+.++|.+.++.+++.++|+.| ||+++||++||||||++||+||+.
T Consensus 334 v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~A----DV~lvT~lrDGmNLVa~Eyva~~~~~~ 409 (487)
T TIGR02398 334 MTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMA----DVMWITPLRDGLNLVAKEYVAAQGLLD 409 (487)
T ss_pred chHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhC----CEEEECccccccCcchhhHHhhhcCCC
Confidence 556778888889999999999999999999999999999999999999 999999999999999999999966
Q ss_pred -CEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHc
Q 002660 431 -PIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQ-LWARCRQNGLKNIHLFSWPEHCKTYLSRIAG 504 (895)
Q Consensus 431 -PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~-~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~ 504 (895)
|+|.|..+|+.+.+ ..+++|||+|++++|++|.++|++|. ++++..+..++.+..++...|++.|++.+..
T Consensus 410 GvLILSefaGaa~~l---~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 410 GVLVLSEFAGAAVEL---KGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQRWADEFLAAVSP 482 (487)
T ss_pred CCEEEeccccchhhc---CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhhh
Confidence 67766665555443 56999999999999999999999765 5566666667777899999999999987763
No 85
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.96 E-value=3.4e-28 Score=261.58 Aligned_cols=244 Identities=14% Similarity=0.182 Sum_probs=151.5
Q ss_pred CeEEEEEecCCC---CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeec
Q 002660 612 KHIFVISVDCDS---TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 688 (895)
Q Consensus 612 ~kli~~DiDGTL---~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~ 688 (895)
.|+|++|+|||| .+.+++.++++|++++++ |+.|+|||||++.++.++++++++. .++||+||+.|++.
T Consensus 3 ~kli~~DlDGTLl~~~~~i~~~~~~ai~~~~~~----G~~~~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~i~d~ 74 (272)
T PRK10530 3 YRVIALDLDGTLLTPKKTILPESLEALARAREA----GYKVIIVTGRHHVAIHPFYQALALD----TPAICCNGTYLYDY 74 (272)
T ss_pred ccEEEEeCCCceECCCCccCHHHHHHHHHHHHC----CCEEEEEcCCChHHHHHHHHhcCCC----CCEEEcCCcEEEec
Confidence 589999999999 356889999999999998 5999999999999999999999983 36999999999964
Q ss_pred cCCCC--CCCcccchh--hHHHhhc-----------cc-CcchHHHHHH--hhhhhccccccccCCccccccc----ccC
Q 002660 689 TLNSE--DGPFVVDFY--YHSHIEY-----------RW-GGEGLRKTLV--RWASQVTDKKAESGEKVLTPAE----QLS 746 (895)
Q Consensus 689 ~~~~~--~~~~~~~~~--~~~~i~~-----------~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~ 746 (895)
..... ...+..+.. ....+.. .| .......... .+........ ......+.+.. ...
T Consensus 75 ~~~~~l~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 153 (272)
T PRK10530 75 QAKKVLEADPLPVQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQ-RPTFTQVDSLAQAARQVN 153 (272)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhc-ccceEEcccHHHHHhhcC
Confidence 21110 000100000 0000000 00 0000000000 0000000000 00000000000 001
Q ss_pred CceEEEEEeeCCCCCccHHHHHHHHHhccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCC
Q 002660 747 TNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDT 826 (895)
Q Consensus 747 ~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~ 826 (895)
..+++... .++ ....+++.+.+... ..+.+..+... ++||+|+++|||.||+++++++|++++++++ +||+.|
T Consensus 154 ~~~~i~~~--~~~-~~~~~~~~~~~~~~-~~~~~~~s~~~-~~ei~~~~~~K~~~l~~l~~~~gi~~~e~i~-~GD~~N- 226 (272)
T PRK10530 154 AIWKFALT--HED-LPQLQHFAKHVEHE-LGLECEWSWHD-QVDIARKGNSKGKRLTQWVEAQGWSMKNVVA-FGDNFN- 226 (272)
T ss_pred CcEEEEEe--cCC-HHHHHHHHHHHhhh-cCceEEEecCc-eEEEecCCCChHHHHHHHHHHcCCCHHHeEE-eCCChh-
Confidence 12232221 111 11223344444322 22444555554 8999999999999999999999999999999 777777
Q ss_pred CccccccCcceEEEecCccccccccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHHHhC
Q 002660 827 DYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLG 891 (895)
Q Consensus 827 D~~eMl~~ag~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~~ 891 (895)
| ++||+.+|+|||||||. ++.|..|+ +||+++++|||+++|++|-
T Consensus 227 D-i~m~~~ag~~vamgna~--~~lk~~Ad-----------------~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 227 D-ISMLEAAGLGVAMGNAD--DAVKARAD-----------------LVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred h-HHHHHhcCceEEecCch--HHHHHhCC-----------------EEEecCCCCcHHHHHHHHh
Confidence 8 99999999999999998 44454544 5999999999999999874
No 86
>PHA01630 putative group 1 glycosyl transferase
Probab=99.95 E-value=5.7e-27 Score=256.36 Aligned_cols=255 Identities=13% Similarity=0.093 Sum_probs=184.6
Q ss_pred eccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhh-hcccCEEEeCChHHHH
Q 002660 150 GHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELS-LDASEIVITSTRQEIE 228 (895)
Q Consensus 150 ~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-l~~ad~vi~~s~~~~~ 228 (895)
.|.....+..+....+.|+|+|++.|+..+ +.+.+ +... .+.+|.|+++|+...+
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~----------------------l~~~~--~~~~~~~~ad~ii~~S~~~~~ 107 (331)
T PHA01630 52 YYTIFNSMLFWKGIPHVGKNIVFEVADTDA----------------------ISHTA--LYFFRNQPVDEIVVPSQWSKN 107 (331)
T ss_pred ehhhhhHHHHHhhccccCCceEEEEEeech----------------------hhHHH--HHHHhhccCCEEEECCHHHHH
Confidence 444445555666666779999999998421 11111 3345 6889999999998777
Q ss_pred HHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhc
Q 002660 229 EQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFF 308 (895)
Q Consensus 229 ~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (895)
.+.... +. . ..++.+||||+|.+.|.+....
T Consensus 108 ~l~~~g--~~-------------------~-~~~i~vIpNGVd~~~f~~~~~~--------------------------- 138 (331)
T PHA01630 108 AFYTSG--LK-------------------I-PQPIYVIPHNLNPRMFEYKPKE--------------------------- 138 (331)
T ss_pred HHHHcC--CC-------------------C-CCCEEEECCCCCHHHcCCCccc---------------------------
Confidence 653321 10 0 1289999999999888653210
Q ss_pred CCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeC
Q 002660 309 TNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYP 387 (895)
Q Consensus 309 ~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~-livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~ 387 (895)
..+..+++++|++.++||++.+|+|++.+.+.. +++. +++|++.. . .++ .++.+ +.
T Consensus 139 -~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~--~~~~llivG~~~~--~---------~~l------~~~~~---~~ 195 (331)
T PHA01630 139 -KPHPCVLAILPHSWDRKGGDIVVKIFHELQNEG--YDFYFLIKSSNML--D---------PRL------FGLNG---VK 195 (331)
T ss_pred -cCCCEEEEEeccccccCCHHHHHHHHHHHHhhC--CCEEEEEEeCccc--c---------hhh------ccccc---ee
Confidence 123456777888999999999999999986433 4454 46775432 1 011 12222 34
Q ss_pred CCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCC------------
Q 002660 388 KHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDP------------ 455 (895)
Q Consensus 388 g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p------------ 455 (895)
+.++.+++..+|+.| |++|+||..|+||++++||||||+|||+|+.||..|++.++.+|+++++
T Consensus 196 ~~v~~~~l~~~y~~a----Dv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~ 271 (331)
T PHA01630 196 TPLPDDDIYSLFAGC----DILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPI 271 (331)
T ss_pred ccCCHHHHHHHHHhC----CEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCc
Confidence 568889999999999 9999999999999999999999999999999999999999888776642
Q ss_pred -------CCHHHHHHHHHHHHhCH--HHHH-HHHHHHHHHhhcCCHHHHHHHHHHHHHc
Q 002660 456 -------HDQQSVADALLKLVADK--QLWA-RCRQNGLKNIHLFSWPEHCKTYLSRIAG 504 (895)
Q Consensus 456 -------~d~~~la~ai~~ll~~~--~~~~-~~~~~~~~~~~~~s~~~~a~~~~~~~~~ 504 (895)
.|.+++++++.+++.++ +.++ .+.++++...++|||+.++++|+++|++
T Consensus 272 ~~G~~v~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 272 HVGYFLDPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred ccccccCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 37788999999999863 4444 4444444444799999999999999974
No 87
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.95 E-value=4.6e-28 Score=257.41 Aligned_cols=225 Identities=15% Similarity=0.196 Sum_probs=153.5
Q ss_pred EEEEecCCC---CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeeccCC
Q 002660 615 FVISVDCDS---TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTLN 691 (895)
Q Consensus 615 i~~DiDGTL---~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~~~ 691 (895)
||+|+|||| ...+++.++++++.++++ |+.|++||||++..+.++++++++. +++||+||+.|+....+
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~----g~~~~i~TGR~~~~~~~~~~~~~~~----~~~I~~nGa~i~~~~~~ 72 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGKISPETIEALKELQEK----GIKLVIATGRSYSSIKRLLKELGID----DYFICSNGALIDDPKGK 72 (254)
T ss_dssp EEEECCTTTCSTTSSSCHHHHHHHHHHHHT----TCEEEEECSSTHHHHHHHHHHTTHC----SEEEEGGGTEEEETTTE
T ss_pred cEEEECCceecCCCeeCHHHHHHHHhhccc----ceEEEEEccCcccccccccccccch----hhhcccccceeeecccc
Confidence 689999999 366899999999999998 5999999999999999999999983 69999999999433211
Q ss_pred CCCCCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCC-----------------------c--ccccccccC
Q 002660 692 SEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGE-----------------------K--VLTPAEQLS 746 (895)
Q Consensus 692 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~--~~~~~~~~~ 746 (895)
.. ....+..+.+..++................ . .........
T Consensus 73 -----~l--------~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (254)
T PF08282_consen 73 -----IL--------YEKPIDSDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDE 139 (254)
T ss_dssp -----EE--------EEESB-HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCS
T ss_pred -----cc--------hhhheeccchhheeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccc
Confidence 11 000011111111111111000000000000 0 000011123
Q ss_pred CceEEEEEeeCCCCCccHHHHHHHHHhcc-CeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCC
Q 002660 747 TNYCYAFSVQKPGMTPPVKELRKVLRIQA-LRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGD 825 (895)
Q Consensus 747 ~~~k~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn 825 (895)
...++.+.. ++ ..++++.+.+.... ....+..+... ++||+|+++|||.||++|++++|++++++++ +||+.|
T Consensus 140 ~i~ki~~~~-~~---~~~~~l~~~l~~~~~~~~~~~~~~~~-~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~-~GD~~N 213 (254)
T PF08282_consen 140 EIFKILFFP-DP---EDLEQLREELKKKFPNLIDVVRSSPY-FLEITPKGVSKGSAIKYLLEYLGISPEDIIA-FGDSEN 213 (254)
T ss_dssp SESEEEEES-CH---HHHHHHHHHHHHHHTTTEEEEEEETT-EEEEEETTSSHHHHHHHHHHHHTTSGGGEEE-EESSGG
T ss_pred cceeeeccc-cc---hhhhhhhhhhccccCcceeEEEeccc-ceEEeeCCCCHHHHHHHHhhhcccccceeEE-eecccc
Confidence 456666432 22 24455555565432 22466777776 9999999999999999999999999999999 666666
Q ss_pred CCccccccCcceEEEecCccccccccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHH
Q 002660 826 TDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSL 887 (895)
Q Consensus 826 ~D~~eMl~~ag~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al 887 (895)
| ++||+.+|+||||+||. .+.|..|++ +|.++++|||+++|
T Consensus 214 -D-~~Ml~~~~~~~am~na~--~~~k~~a~~-----------------i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 214 -D-IEMLELAGYSVAMGNAT--PELKKAADY-----------------ITPSNNDDGVAKAI 254 (254)
T ss_dssp -G-HHHHHHSSEEEEETTS---HHHHHHSSE-----------------EESSGTCTHHHHHH
T ss_pred -c-HhHHhhcCeEEEEcCCC--HHHHHhCCE-----------------EecCCCCChHHHhC
Confidence 6 99999999999999999 666777666 99999999999986
No 88
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.95 E-value=1.5e-26 Score=258.74 Aligned_cols=325 Identities=17% Similarity=0.194 Sum_probs=210.5
Q ss_pred CCCcEEEeccccchhHHHHHh-ccCCCCEEEEeCCCchhhHHHHHHHhhc---------cHHHHHhhhhhhHHHHHHHhh
Q 002660 143 VWPVAIHGHYADAGDSAALLS-GALNVPMLFTGHSLGRDKLEQLLKQARL---------SRDEINATYKIMRRIEAEELS 212 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~-~~~~ip~v~t~H~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~e~~~ 212 (895)
.++||+|+|.|.++..+..+. +..++|+|+|.|....-.. +..|.. ..........+..+...|+.+
T Consensus 147 ~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT~~GR~---l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~a 223 (590)
T cd03793 147 EPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHATLLGRY---LCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAA 223 (590)
T ss_pred CCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecccccccc---cccCCcccchhhhhcchhhhhhcccchHHHHHHHHH
Confidence 569999999999999998888 5678999999997643221 111110 001111123344555568899
Q ss_pred hcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 002660 213 LDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDN 292 (895)
Q Consensus 213 l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~ 292 (895)
...||.++++|+.+..+....|+ ++.++ |||||+|.+.|.+...-.. .
T Consensus 224 a~~Ad~fttVS~it~~E~~~Ll~----------------------~~pd~--ViPNGid~~~f~~~~e~~~--~------ 271 (590)
T cd03793 224 AHCAHVFTTVSEITAYEAEHLLK----------------------RKPDV--VLPNGLNVKKFSALHEFQN--L------ 271 (590)
T ss_pred HhhCCEEEECChHHHHHHHHHhC----------------------CCCCE--EeCCCcchhhcccchhhhh--h------
Confidence 99999999999988888776654 33334 9999999999975431100 0
Q ss_pred CCCCCCchhH-----HhhhhcCCCCCcEEEE-EeCCCC-CCCHHHHHHHHHhcccc----cCCCcEE-EE-EecC---CC
Q 002660 293 PASPDPPIWS-----EIMRFFTNPRKPVILA-LARPDP-KKNITTLVKAFGECRPL----RELANLT-LI-MGNR---DG 356 (895)
Q Consensus 293 ~~~~~~~~~~-----~~~~~~~~~~~~~il~-vgrl~~-~Kgi~~ll~A~~~l~~~----~~~~~l~-li-vG~~---~~ 356 (895)
.......... .+.++..++++++++| +||+.+ .||++.+|+|+.++... ..+-.++ ++ +... -.
T Consensus 272 ~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~ 351 (590)
T cd03793 272 HAQSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFN 351 (590)
T ss_pred hHHhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcC
Confidence 0001111111 2333455677888888 799998 99999999999998531 1112232 33 3221 11
Q ss_pred ccccccch-----HHHHHH------------------------------------------------------------H
Q 002660 357 IDEMSSTS-----ASVLLS------------------------------------------------------------V 371 (895)
Q Consensus 357 ~~~~~~~~-----~~~~~~------------------------------------------------------------l 371 (895)
.+.++.+. ++-... +
T Consensus 352 ~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~i 431 (590)
T cd03793 352 VESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPI 431 (590)
T ss_pred HHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHH
Confidence 11121110 111111 1
Q ss_pred HHHHHhcCCC----C--cEEeC-CCCC------CCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCC
Q 002660 372 LKLIDKYDLY----G--QVAYP-KHHK------QSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG 438 (895)
Q Consensus 372 ~~~~~~~~l~----~--~v~~~-g~~~------~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~g 438 (895)
...+.+.+|. + +|.|+ .+++ ..+..++|+.| |++|+||++||||++++||||||+|+|+|+.+
T Consensus 432 l~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~----dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~ 507 (590)
T cd03793 432 LNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGC----HLGVFPSYYEPWGYTPAECTVMGIPSITTNLS 507 (590)
T ss_pred HHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhc----eEEEeccccCCCCcHHHHHHHcCCCEEEccCc
Confidence 1122222221 1 13333 2222 23588999999 99999999999999999999999999999999
Q ss_pred Cc----hhccccC-CCeEEeC-------CCCHHHHHHHHHHHHhCHHHHHHHHHHHH--HHhhcCCHHHHHHHHHHHHHc
Q 002660 439 GP----VDIHRVL-DNGLLVD-------PHDQQSVADALLKLVADKQLWARCRQNGL--KNIHLFSWPEHCKTYLSRIAG 504 (895)
Q Consensus 439 g~----~eiv~~~-~~g~lv~-------p~d~~~la~ai~~ll~~~~~~~~~~~~~~--~~~~~~s~~~~a~~~~~~~~~ 504 (895)
|+ .|++.++ ..|++|. +.++++++++|.+++.. +.++++..++. +..+.|+|++.+..|.+.+.-
T Consensus 508 gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~ 586 (590)
T cd03793 508 GFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEFCQL-SRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQL 586 (590)
T ss_pred chhhhhHHHhccCCCceEEEecCCccchHHHHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 88 5665444 3577776 45678899999998854 45565555554 555799999999999999987
Q ss_pred ccC
Q 002660 505 CKP 507 (895)
Q Consensus 505 ~~~ 507 (895)
.++
T Consensus 587 Al~ 589 (590)
T cd03793 587 ALS 589 (590)
T ss_pred Hhh
Confidence 654
No 89
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.95 E-value=1.8e-27 Score=252.82 Aligned_cols=236 Identities=19% Similarity=0.129 Sum_probs=151.7
Q ss_pred EEEEEecCCCC--cc-hhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeeccC
Q 002660 614 IFVISVDCDST--TG-LLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTL 690 (895)
Q Consensus 614 li~~DiDGTL~--~~-~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~~ 690 (895)
||++|+||||. .. ..+.+++++++++++ |+.|+|||||++..+.++++++++ ++++||+||++|++.++
T Consensus 1 li~~DlDGTll~~~~~~~~~~~~~i~~l~~~----g~~~~~~TgR~~~~~~~~~~~~~~----~~~~I~~NGa~i~~~~~ 72 (256)
T TIGR01486 1 WIFTDLDGTLLDPHGYDWGPAKEVLERLQEL----GIPVIPCTSKTAAEVEYLRKELGL----EDPFIVENGGAIYGPRG 72 (256)
T ss_pred CEEEcCCCCCcCCCCcCchHHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHcCC----CCcEEEcCCeEEEeCCC
Confidence 58999999993 22 445689999999998 599999999999999999999998 36899999999998643
Q ss_pred CCCCCCcccchhhHHHhhcccCcchHHHHHHhhhhhc---ccc--ccc-------cCCc-ccccccccCCceEEEEEeeC
Q 002660 691 NSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQV---TDK--KAE-------SGEK-VLTPAEQLSTNYCYAFSVQK 757 (895)
Q Consensus 691 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~--~~~-------~~~~-~~~~~~~~~~~~k~~~~~~~ 757 (895)
... .+..| .....|..+.+..+++.+.... ... ... .... ............++.+. +
T Consensus 73 ~~~-----~~~~~--~~~~~i~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 143 (256)
T TIGR01486 73 WFT-----EPEYP--VIALGIPYEKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILW--S 143 (256)
T ss_pred ccc-----CCCeE--EEEcCCCHHHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceec--C
Confidence 210 00001 0112222233333332211100 000 000 0000 00000000112222222 2
Q ss_pred CCCCccHHHHHHHHHhccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCC--cccEEEEecCCCCCCccccccCc
Q 002660 758 PGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVE--LSKMVVFVGESGDTDYEGLLGGV 835 (895)
Q Consensus 758 ~~~~~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~--~~~viaf~Gd~nn~D~~eMl~~a 835 (895)
+ ...+.+.+.+...+ +.++.+ .. ++||+|+++|||.||++|++++|++ .+++++ +||+.| | ++||+.+
T Consensus 144 ~---~~~~~~~~~~~~~~--~~~~~s-~~-~~ei~~~~~~Kg~ai~~l~~~~~i~~~~~~~~a-~GD~~N-D-~~Ml~~a 213 (256)
T TIGR01486 144 E---ERRERFTEALVELG--LEVTHG-NR-FYHVLGAGSDKGKAANALKQFYNQPGGAIKVVG-LGDSPN-D-LPLLEVV 213 (256)
T ss_pred h---HHHHHHHHHHHHcC--CEEEeC-Cc-eEEEecCCCCHHHHHHHHHHHHhhcCCCceEEE-EcCCHh-h-HHHHHHC
Confidence 2 23445556665432 444554 34 8999999999999999999999999 999999 777777 7 9999999
Q ss_pred ceEEEecCcccc-ccccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHHHh
Q 002660 836 HKTVILKGICSS-SSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQL 890 (895)
Q Consensus 836 g~gVaMgNa~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~ 890 (895)
|+||||+||.+. .++|... +..+|||+++++|||+++|+||
T Consensus 214 g~~vam~Na~~~~~~lk~~~--------------~a~~~vt~~~~~dGva~~l~~~ 255 (256)
T TIGR01486 214 DLAVVVPGPNGPNVSLKPGD--------------PGSFLLTPAPGPEGWREALEHL 255 (256)
T ss_pred CEEEEeCCCCCCccccCccC--------------CCcEEEcCCCCcHHHHHHHHHh
Confidence 999999999832 2223220 0134799999999999999987
No 90
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.95 E-value=9.1e-26 Score=252.81 Aligned_cols=345 Identities=16% Similarity=0.143 Sum_probs=239.2
Q ss_pred ceeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcc
Q 002660 3 FNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDF 82 (895)
Q Consensus 3 ~m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~ 82 (895)
||||++++ ...||.+....+|+++|.++| |+|++++.... +. .+..
T Consensus 1 ~~~i~i~~---------------~g~gG~~~~~~~la~~L~~~g--~ev~vv~~~~~-~~--------~~~~-------- 46 (357)
T PRK00726 1 MKKILLAG---------------GGTGGHVFPALALAEELKKRG--WEVLYLGTARG-ME--------ARLV-------- 46 (357)
T ss_pred CcEEEEEc---------------CcchHhhhHHHHHHHHHHhCC--CEEEEEECCCc-hh--------hhcc--------
Confidence 37999886 345799999999999999999 99999987431 00 0000
Q ss_pred cccCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHH
Q 002660 83 MDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALL 162 (895)
Q Consensus 83 ~~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~ 162 (895)
...|+++++++..... ....+..+..+. ..+..+.+..+.+++ .+|||||+|.+..++.+..+
T Consensus 47 -----~~~g~~~~~~~~~~~~----~~~~~~~l~~~~-~~~~~~~~~~~~ik~-------~~pDvv~~~~~~~~~~~~~~ 109 (357)
T PRK00726 47 -----PKAGIEFHFIPSGGLR----RKGSLANLKAPF-KLLKGVLQARKILKR-------FKPDVVVGFGGYVSGPGGLA 109 (357)
T ss_pred -----ccCCCcEEEEeccCcC----CCChHHHHHHHH-HHHHHHHHHHHHHHh-------cCCCEEEECCCcchhHHHHH
Confidence 0137888888753320 000011111111 112222222222222 68999999987666677777
Q ss_pred hccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHH
Q 002660 163 SGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 242 (895)
Q Consensus 163 ~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~ 242 (895)
++..++|+|++.|+..+.. .+++..+.+|.++++++.... . ...
T Consensus 110 ~~~~~~p~v~~~~~~~~~~--------------------------~~r~~~~~~d~ii~~~~~~~~---~----~~~--- 153 (357)
T PRK00726 110 ARLLGIPLVIHEQNAVPGL--------------------------ANKLLARFAKKVATAFPGAFP---E----FFK--- 153 (357)
T ss_pred HHHcCCCEEEEcCCCCccH--------------------------HHHHHHHHhchheECchhhhh---c----cCC---
Confidence 7888999999887643211 022346678999988874321 1 111
Q ss_pred HHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCC
Q 002660 243 RKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARP 322 (895)
Q Consensus 243 ~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl 322 (895)
.++.++|||+|.+.+.+.. . ..++...++.++|+++|+.
T Consensus 154 ------------------~~i~vi~n~v~~~~~~~~~--~---------------------~~~~~~~~~~~~i~~~gg~ 192 (357)
T PRK00726 154 ------------------PKAVVTGNPVREEILALAA--P---------------------PARLAGREGKPTLLVVGGS 192 (357)
T ss_pred ------------------CCEEEECCCCChHhhcccc--h---------------------hhhccCCCCCeEEEEECCc
Confidence 3899999999987664311 0 0122234567889999998
Q ss_pred CCCCCHHHHH-HHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHH
Q 002660 323 DPKKNITTLV-KAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRL 401 (895)
Q Consensus 323 ~~~Kgi~~ll-~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~ 401 (895)
...|++..++ +|+.++.. . +...+++|+++. +++....+ +++. |.|.|++ +++..+|..
T Consensus 193 ~~~~~~~~~l~~a~~~~~~-~--~~~~~~~G~g~~------------~~~~~~~~-~~~~--v~~~g~~--~~~~~~~~~ 252 (357)
T PRK00726 193 QGARVLNEAVPEALALLPE-A--LQVIHQTGKGDL------------EEVRAAYA-AGIN--AEVVPFI--DDMAAAYAA 252 (357)
T ss_pred HhHHHHHHHHHHHHHHhhh-C--cEEEEEcCCCcH------------HHHHHHhh-cCCc--EEEeehH--hhHHHHHHh
Confidence 8888876655 99988853 1 333346788752 33444444 5653 8999996 789999999
Q ss_pred hhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCC--------chhccccCCCeEEeCCCC--HHHHHHHHHHHHhC
Q 002660 402 AAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG--------PVDIHRVLDNGLLVDPHD--QQSVADALLKLVAD 471 (895)
Q Consensus 402 A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg--------~~eiv~~~~~g~lv~p~d--~~~la~ai~~ll~~ 471 (895)
| |++|.++ .+++++|||+||+|+|++..++ ..+.+.+.+.|+++++.| +++++++|.+++++
T Consensus 253 ~----d~~i~~~----g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~ 324 (357)
T PRK00726 253 A----DLVICRA----GASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSD 324 (357)
T ss_pred C----CEEEECC----CHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcC
Confidence 9 9999876 2689999999999999987643 235677778999998888 99999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 002660 472 KQLWARCRQNGLKNIHLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~ 503 (895)
++.++++++++++..+.++.+.+++.+++.++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 325 PERLEAMAEAARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred HHHHHHHHHHHHhcCCcCHHHHHHHHHHHHhh
Confidence 99999999999998889999999999988765
No 91
>PHA01633 putative glycosyl transferase group 1
Probab=99.95 E-value=1.9e-25 Score=241.07 Aligned_cols=221 Identities=12% Similarity=0.158 Sum_probs=163.9
Q ss_pred hcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 002660 213 LDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDN 292 (895)
Q Consensus 213 l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~ 292 (895)
+...+.+|++|+...+.+.+. |+ +. .+ +|++|+|++.|.+.....
T Consensus 90 m~~~~~vIavS~~t~~~L~~~------------------G~-----~~-~i-~I~~GVD~~~f~p~~~~~---------- 134 (335)
T PHA01633 90 LLQDVKFIPNSKFSAENLQEV------------------GL-----QV-DL-PVFHGINFKIVENAEKLV---------- 134 (335)
T ss_pred HhcCCEEEeCCHHHHHHHHHh------------------CC-----CC-ce-eeeCCCChhhcCccchhh----------
Confidence 445668999998877765432 11 11 33 478999999987633100
Q ss_pred CCCCCCchhHHhhhhcCC-CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEE-EEecCCCccccccchHHHH
Q 002660 293 PASPDPPIWSEIMRFFTN-PRKPVILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRDGIDEMSSTSASVL 368 (895)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~-~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~--~l~l-ivG~~~~~~~~~~~~~~~~ 368 (895)
...+.++... ++.++++++||+.++||++.+++|++.+.+..+.+ ++.+ ++|.
T Consensus 135 --------~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~--------------- 191 (335)
T PHA01633 135 --------PQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH--------------- 191 (335)
T ss_pred --------HHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH---------------
Confidence 0111222221 46788999999999999999999999986544432 3454 4442
Q ss_pred HHHHHHHHhcCCCCcEEeC---CCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccc
Q 002660 369 LSVLKLIDKYDLYGQVAYP---KHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHR 445 (895)
Q Consensus 369 ~~l~~~~~~~~l~~~v~~~---g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~ 445 (895)
....++++.++|.|. |+++.+++.++|+.| |++|+||..||||++++||||||+|||+++.|+..|++.
T Consensus 192 ----~~~~~l~l~~~V~f~g~~G~~~~~dl~~~y~~a----DifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g 263 (335)
T PHA01633 192 ----KQFTQLEVPANVHFVAEFGHNSREYIFAFYGAM----DFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTS 263 (335)
T ss_pred ----HHHHHcCCCCcEEEEecCCCCCHHHHHHHHHhC----CEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecC
Confidence 123456677889998 556778999999999 999999999999999999999999999999999888643
Q ss_pred c------------------CCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHH
Q 002660 446 V------------------LDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLS 500 (895)
Q Consensus 446 ~------------------~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~ 500 (895)
+ ...|+++++.|+++++++|.++++..+ ...+++++++.+++|+|+.++++|++
T Consensus 264 ~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~-~~~~~~~~~~~a~~f~~~~~~~~~~~ 335 (335)
T PHA01633 264 WQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQD-REERSMKLKELAKKYDIRNLYTRFLE 335 (335)
T ss_pred CccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccC-hhhhhHHHHHHHHhcCHHHHHHHhhC
Confidence 1 234678888999999999999976432 33347778888899999999999863
No 92
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.95 E-value=6.2e-26 Score=255.81 Aligned_cols=274 Identities=24% Similarity=0.307 Sum_probs=209.7
Q ss_pred CCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeC
Q 002660 143 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 222 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~ 222 (895)
.++|+++++....... ..+......+.++++|+.......... .. .+...+ +. ....++.+|.|+++
T Consensus 98 ~~~diii~~~~~~~~~-~~~~~~~~~~~i~~~h~~~~~~~~~~~-~~-----~~~~~~---~~---~~~~~~~~d~ii~~ 164 (372)
T cd04949 98 TKPDVFILDRPTLDGQ-ALLNMKKAAKVVVVLHSNHVSDNNDPV-HS-----LINNFY---EY---VFENLDKVDGVIVA 164 (372)
T ss_pred CCCCEEEECCccccch-hHHhccCCceEEEEEChHHhCCccccc-cc-----ccchhh---HH---HHhChhhCCEEEEc
Confidence 5699999998644333 233334466788999975322210000 00 001111 11 12346889999999
Q ss_pred ChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhH
Q 002660 223 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 302 (895)
Q Consensus 223 s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (895)
|+...+.+...++.. .++.+||+|++...+.+...
T Consensus 165 s~~~~~~l~~~~~~~-----------------------~~v~~ip~g~~~~~~~~~~~---------------------- 199 (372)
T cd04949 165 TEQQKQDLQKQFGNY-----------------------NPIYTIPVGSIDPLKLPAQF---------------------- 199 (372)
T ss_pred cHHHHHHHHHHhCCC-----------------------CceEEEcccccChhhcccch----------------------
Confidence 998887776654321 15899999999887754210
Q ss_pred HhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCC
Q 002660 303 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYG 382 (895)
Q Consensus 303 ~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~ 382 (895)
....++.++++||+.+.||++.+|+|+..+.+..+...+ +++|.++. ...+...+..+++.+
T Consensus 200 ------~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l-~i~G~g~~-----------~~~~~~~~~~~~~~~ 261 (372)
T cd04949 200 ------KQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATL-DIYGYGDE-----------EEKLKELIEELGLED 261 (372)
T ss_pred ------hhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEE-EEEEeCch-----------HHHHHHHHHHcCCcc
Confidence 123467899999999999999999999998644444444 36787764 234556667888889
Q ss_pred cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCC-CchhccccCCCeEEeCCCCHHHH
Q 002660 383 QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG-GPVDIHRVLDNGLLVDPHDQQSV 461 (895)
Q Consensus 383 ~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~g-g~~eiv~~~~~g~lv~p~d~~~l 461 (895)
+|.|.|+ .+++.++|+.| |++|+||..||||++++|||+||+|||+++.+ |+.+++.++.+|++++++|++++
T Consensus 262 ~v~~~g~--~~~~~~~~~~a----d~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~l 335 (372)
T cd04949 262 YVFLKGY--TRDLDEVYQKA----QLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVPKGDIEAL 335 (372)
T ss_pred eEEEcCC--CCCHHHHHhhh----hEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeCCCcHHHH
Confidence 9999995 67899999999 99999999999999999999999999999987 89999999999999999999999
Q ss_pred HHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHH
Q 002660 462 ADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTY 498 (895)
Q Consensus 462 a~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~~ 498 (895)
+++|.+++++++.+++++.++++..++|||+.++++|
T Consensus 336 a~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~w 372 (372)
T cd04949 336 AEAIIELLNDPKLLQKFSEAAYENAERYSEENVWEKW 372 (372)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence 9999999999999999999999998899999998764
No 93
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.95 E-value=6.1e-27 Score=249.10 Aligned_cols=226 Identities=14% Similarity=0.109 Sum_probs=149.6
Q ss_pred EEEEEecCCCC---cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeeccC
Q 002660 614 IFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTL 690 (895)
Q Consensus 614 li~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~~ 690 (895)
||++||||||. +.+++.+.+++++++++ |+.|+|||||++..+.++++++++. .++||+||+.|++.+.
T Consensus 1 li~~DlDGTLl~~~~~i~~~~~~~i~~l~~~----G~~~~iaTGR~~~~~~~~~~~~~~~----~~~I~~NGa~i~~~~~ 72 (256)
T TIGR00099 1 LIFIDLDGTLLNDDHTISPSTKEALAKLREK----GIKVVLATGRPYKEVKNILKELGLD----TPFITANGAAVIDDQG 72 (256)
T ss_pred CEEEeCCCCCCCCCCccCHHHHHHHHHHHHC----CCeEEEEeCCCHHHHHHHHHHcCCC----CCEEEcCCcEEECCCC
Confidence 58999999993 56889999999999998 5999999999999999999999883 3799999999997632
Q ss_pred CCCCCCcccchhhHHHhhcccCcchHHHHHHhhhhhccc-----ccc--c----------------cCCcccccc--ccc
Q 002660 691 NSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTD-----KKA--E----------------SGEKVLTPA--EQL 745 (895)
Q Consensus 691 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-----~~~--~----------------~~~~~~~~~--~~~ 745 (895)
... .... +..+.+..++..+...... ... . .....+... ...
T Consensus 73 ~~i-~~~~------------i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (256)
T TIGR00099 73 EIL-YKKP------------LDLDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPD 139 (256)
T ss_pred CEE-eecC------------CCHHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhc
Confidence 110 0000 0111111111110000000 000 0 000000000 000
Q ss_pred CCceEEEEEeeCCCCCccHHHHHHHHHh--ccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCC
Q 002660 746 STNYCYAFSVQKPGMTPPVKELRKVLRI--QALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGES 823 (895)
Q Consensus 746 ~~~~k~~~~~~~~~~~~~~~~l~~~l~~--~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~ 823 (895)
....++.+. .++ ...+++.+.+.. ....+.+..+.+. ++||+|+++|||.||+++++++|++++++++ +||+
T Consensus 140 ~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~s~~~-~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~-~GD~ 213 (256)
T TIGR00099 140 DILKILLLF-LDP---EDLDLLIEALNKLELEENVSVVSSGPY-SIEITAKGVSKGSALQSLAEALGISLEDVIA-FGDG 213 (256)
T ss_pred ccceEEEEE-CCH---HHHHHHHHHhhhhhhcCCEEEEEecCc-eEEecCCCCChHHHHHHHHHHcCCCHHHEEE-eCCc
Confidence 112222222 111 123455555542 2344667777775 9999999999999999999999999999999 7777
Q ss_pred CCCCccccccCcceEEEecCccccccccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHH
Q 002660 824 GDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSL 887 (895)
Q Consensus 824 nn~D~~eMl~~ag~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al 887 (895)
.| | ++||+.+|.+|||+||. .++|..|+ ++|.++++|||+++|
T Consensus 214 ~n-D-~~m~~~~~~~~a~~na~--~~~k~~a~-----------------~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 214 MN-D-IEMLEAAGYGVAMGNAD--EELKALAD-----------------YVTDSNNEDGVALAL 256 (256)
T ss_pred HH-h-HHHHHhCCceeEecCch--HHHHHhCC-----------------EEecCCCCcchhhhC
Confidence 77 7 99999999999999998 44555554 499999999999875
No 94
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=99.94 E-value=1.9e-26 Score=256.13 Aligned_cols=317 Identities=15% Similarity=0.134 Sum_probs=242.1
Q ss_pred CcEEEeccccchhHHHHHhcc-CCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCC
Q 002660 145 PVAIHGHYADAGDSAALLSGA-LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITST 223 (895)
Q Consensus 145 pDvVh~h~~~~~~~~~~~~~~-~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s 223 (895)
-|+|..|.+...+++..+.++ ...++-|.+|-.++..- ++. ...+.+. -...+-.+|.|-.-|
T Consensus 124 ~D~VWVHDYhL~llp~~LR~~~~~~~IgFFlHiPFPs~e--ifr-----------~LP~r~e---il~glL~aDlIGFqt 187 (474)
T PRK10117 124 DDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIPFPTPE--IFN-----------ALPPHDE---LLEQLCDYDLLGFQT 187 (474)
T ss_pred CCEEEEeccHhhHHHHHHHHhCCCCcEEEEEeCCCCChH--HHh-----------hCCChHH---HHHHHHhCccceeCC
Confidence 489999998777777777654 45788999998765431 110 0001111 124677899999999
Q ss_pred hHHHHHHHhhhcCCChHHHHHHHHhHhc--cccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchh
Q 002660 224 RQEIEEQWRLYDGFDPVLERKLRARIKR--NVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 301 (895)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~--gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (895)
...++.+.... .+.|+.+... .+...|+.+ ++.++|.|||++.|...... +.....
T Consensus 188 ~~y~rnFl~~~-------~~~lg~~~~~~~~v~~~gr~v-~v~~~PigID~~~~~~~a~~--------------~~~~~~ 245 (474)
T PRK10117 188 ENDRLAFLDCL-------SNLTRVTTRSGKSHTAWGKAF-RTEVYPIGIEPDEIAKQAAG--------------PLPPKL 245 (474)
T ss_pred HHHHHHHHHHH-------HHHcCCcccCCCeEEECCeEE-EEEEEECeEcHHHHHHHhhc--------------hHHHHH
Confidence 98877665432 2223322211 244456666 89999999999998743211 011122
Q ss_pred HHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEEE-E-----ecCCCccccccchHHHHHHHHH
Q 002660 302 SEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELA--NLTLI-M-----GNRDGIDEMSSTSASVLLSVLK 373 (895)
Q Consensus 302 ~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~--~l~li-v-----G~~~~~~~~~~~~~~~~~~l~~ 373 (895)
..++... .++++|+.++|+|+.||+...++||+++++.+|.+ +++++ + ++.++|++++++.++.+++||+
T Consensus 246 ~~lr~~~--~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg 323 (474)
T PRK10117 246 AQLKAEL--KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRING 323 (474)
T ss_pred HHHHHHc--CCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHh
Confidence 2333322 46889999999999999999999999998777766 44442 2 4456778889999999999999
Q ss_pred HHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHc------CCCEEEcCCCCchhccccC
Q 002660 374 LIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH------GLPIVATKNGGPVDIHRVL 447 (895)
Q Consensus 374 ~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~------G~PVvas~~gg~~eiv~~~ 447 (895)
..++.+|.+..++...++++++.++|+.| ||+++||++||||||++||+|| |+.|+|..+|++.++
T Consensus 324 ~fg~~~w~Pv~y~~~~~~~~~l~alyr~A----Dv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGaA~~L---- 395 (474)
T PRK10117 324 KYGQLGWTPLYYLNQHFDRKLLMKIFRYS----DVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL---- 395 (474)
T ss_pred ccCCCCceeEEEecCCCCHHHHHHHHHhc----cEEEecccccccccccchheeeecCCCCccEEEecccchHHHh----
Confidence 99999999999999999999999999999 9999999999999999999999 778899999999888
Q ss_pred CCeEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccCCC
Q 002660 448 DNGLLVDPHDQQSVADALLKLVADK-QLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPRH 509 (895)
Q Consensus 448 ~~g~lv~p~d~~~la~ai~~ll~~~-~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~~~~~ 509 (895)
..+++|||+|.+++|+||.++|++| +++++..+..++.+..++...|++.|++.+..+..+.
T Consensus 396 ~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~~~~ 458 (474)
T PRK10117 396 TSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVPRS 458 (474)
T ss_pred CCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhhcC
Confidence 4699999999999999999999965 5566666667777799999999999999999875443
No 95
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.94 E-value=3.5e-26 Score=236.41 Aligned_cols=211 Identities=15% Similarity=0.179 Sum_probs=146.5
Q ss_pred eEEEEEecCCCC---cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeecc
Q 002660 613 HIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYST 689 (895)
Q Consensus 613 kli~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~ 689 (895)
|+|++|+||||. +.+++.+.++|++++++ |+.|+|||||++..+.++++.+++. .++||+||+.|++.+
T Consensus 2 k~v~~DlDGTLl~~~~~i~~~~~~~i~~l~~~----g~~~~~~TGR~~~~~~~~~~~l~~~----~~~i~~NGa~i~~~~ 73 (215)
T TIGR01487 2 KLVAIDIDGTLTEPNRMISERAIEAIRKAEKK----GIPVSLVTGNTVPFARALAVLIGTS----GPVVAENGGVIFYNK 73 (215)
T ss_pred cEEEEecCCCcCCCCcccCHHHHHHHHHHHHC----CCEEEEEcCCcchhHHHHHHHhCCC----CcEEEccCcEEEeCC
Confidence 799999999993 56889999999999997 5999999999999999999999883 479999999999864
Q ss_pred CCCCCCCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEEEeeCCCCCccHHHHHH
Q 002660 690 LNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRK 769 (895)
Q Consensus 690 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~ 769 (895)
.. .. +.. ....|........ .+....... ........... .. ...+.+.+
T Consensus 74 ~~-----~~----~~~-~~~~~~~~~~~~~--~~~~~~~~~--------------~~~~~~~~~~~-~~---~~~~~~~~ 123 (215)
T TIGR01487 74 ED-----IF----LAN-MEEEWFLDEEKKK--RFPRDRLSN--------------EYPRASLVIMR-EG---KDVDEVRE 123 (215)
T ss_pred Cc-----EE----Eec-ccchhhHHHhhhh--hhhhhhccc--------------ccceeEEEEec-CC---ccHHHHHH
Confidence 21 10 000 0000000000000 000000000 00011111221 11 22345555
Q ss_pred HHHhccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEecCcccccc
Q 002660 770 VLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSS 849 (895)
Q Consensus 770 ~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgNa~~~~~ 849 (895)
.+... .+.+..+ +. ++||+|.++|||.||+++++++|++.+++++ +||+.| | ++||+.+|+||||+||. ++
T Consensus 124 ~l~~~--~~~~~~~-~~-~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~-iGDs~N-D-~~ml~~ag~~vam~na~--~~ 194 (215)
T TIGR01487 124 IIKER--GLNLVDS-GF-AIHIMKKGVDKGVGVEKLKELLGIKPEEVAA-IGDSEN-D-IDLFRVVGFKVAVANAD--DQ 194 (215)
T ss_pred HHHhC--CeEEEec-Cc-eEEEecCCCChHHHHHHHHHHhCCCHHHEEE-ECCCHH-H-HHHHHhCCCeEEcCCcc--HH
Confidence 55543 3444444 44 8999999999999999999999999999999 777777 8 99999999999999998 55
Q ss_pred ccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHH
Q 002660 850 NQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSL 887 (895)
Q Consensus 850 ~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al 887 (895)
+|..|+ |||+++++|||+++|
T Consensus 195 ~k~~A~-----------------~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 195 LKEIAD-----------------YVTSNPYGEGVVEVL 215 (215)
T ss_pred HHHhCC-----------------EEcCCCCCchhhhhC
Confidence 555555 499999999999875
No 96
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=99.94 E-value=2.9e-24 Score=249.36 Aligned_cols=524 Identities=14% Similarity=0.106 Sum_probs=343.8
Q ss_pred CCcEEEeccccchhHHHHHhcc-CCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeC
Q 002660 144 WPVAIHGHYADAGDSAALLSGA-LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 222 (895)
Q Consensus 144 ~pDvVh~h~~~~~~~~~~~~~~-~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~ 222 (895)
.-|+|..|.....++...+... ..+++-+..|+..+-. +.+... + ..+. -...+..+|.+-..
T Consensus 140 ~~d~vwihdyhlmllp~~lr~~~~~~~ig~flhspfpss-Ei~r~l---p---------~r~e---Il~gll~~~~i~f~ 203 (732)
T KOG1050|consen 140 EGDIVWIHDYHLMLLPQMLRERFNSAKIGFFLHSPFPSS-EIYRCL---P---------VRKE---ILRGLLYDDLLGFH 203 (732)
T ss_pred CCCcEEEEcchhhccchhhhcccccceEEEeccCCCChH-HHHHhc---c---------cHHH---HHHhhhccCccccc
Confidence 4677777776444444445444 3566667778765422 111100 0 0011 11245677776666
Q ss_pred ChHHHHHHHhhhcCCChHHHHHHHHhH-----hccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 002660 223 TRQEIEEQWRLYDGFDPVLERKLRARI-----KRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPD 297 (895)
Q Consensus 223 s~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~ 297 (895)
+.+.....+.. -.+.|+... ..||++.|+.. .+..+|.|||..+|......
T Consensus 204 t~d~arhFls~-------c~R~l~~~~~s~~~~~~v~~rgr~~-~v~~~pigid~~r~v~~~~~---------------- 259 (732)
T KOG1050|consen 204 TDDYARHFLST-------CSRLLGLEVASKFPTAGVSGRGRDV-SVKALPIGIDVQRFVKLLEL---------------- 259 (732)
T ss_pred cccHHHHHHHH-------HHHHHHhhhhccCCcceEEecccee-eeeecccccchHHhhccccc----------------
Confidence 65444433221 123333332 34678888776 89999999999998743311
Q ss_pred CchhHHhhhhcCC-CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEEE-E-----ecCCCccccccchHHHH
Q 002660 298 PPIWSEIMRFFTN-PRKPVILALARPDPKKNITTLVKAFGECRPLRELA--NLTLI-M-----GNRDGIDEMSSTSASVL 368 (895)
Q Consensus 298 ~~~~~~~~~~~~~-~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~--~l~li-v-----G~~~~~~~~~~~~~~~~ 368 (895)
+........+..+ .++++|+.++|+++.||+..-+.||+++.+..+.+ +++++ + +++.+++.++......+
T Consensus 260 ~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~~~k~~v~~~v 339 (732)
T KOG1050|consen 260 PYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVEELKFCVSVHV 339 (732)
T ss_pred hhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchHHHHHHHHhHhhh
Confidence 1111122222111 57899999999999999999999999998666654 34332 2 34455566777788888
Q ss_pred HHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHc-----CCCEEEcCCCCchhc
Q 002660 369 LSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH-----GLPIVATKNGGPVDI 443 (895)
Q Consensus 369 ~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~-----G~PVvas~~gg~~ei 443 (895)
.++++........+.+.+...++..++.++|..| |++++.++.+|++++.+|+.+| |..|++...|...-+
T Consensus 340 ~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Va----ev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl 415 (732)
T KOG1050|consen 340 RRINEKFGSASYQPVHSLLKDLPFLELLALYKVA----EVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTL 415 (732)
T ss_pred hhhhhccCCcccceEEEeeccCCHHHHhhhHHhh----hheeecccccccchhhhHHHHhhcccCCceEEeeeccccccc
Confidence 8888888888877778889999999999999999 9999999999999999999999 445555566665432
Q ss_pred cccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHH-HHHHHhhcCCHHHHHHHHHHHHHcccCCCCCCCCCCCCCCCC
Q 002660 444 HRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQ-NGLKNIHLFSWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETS 522 (895)
Q Consensus 444 v~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~-~~~~~~~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (895)
++..++++|+|.+.++.+|..++++++...+++. ...+.+..++...|+..+...+.+.-.... .
T Consensus 416 ---~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~~~~~~~l~~~~~~~~-~---------- 481 (732)
T KOG1050|consen 416 ---EDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWAKSFLQGLKRIWKVGF-L---------- 481 (732)
T ss_pred ---cccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHHHHHHHhhhhhhhhcc-c----------
Confidence 3567899999999999999999997765444444 444444678889999999884443322111 0
Q ss_pred CCCCCCCccccccccccccccccCCCCCCCCCCCCCCcccCcchhhhhHHHHHHHHhhccccccccCCCCCccccccCcC
Q 002660 523 ESDSPGDSLRDIQDISLNLKFSLDGEKSGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGA 602 (895)
Q Consensus 523 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (895)
.+++ ++-...+.++..|+
T Consensus 482 -------------------~~~~---------------------~~~l~~~~~i~~y~---------------------- 499 (732)
T KOG1050|consen 482 -------------------GFRV---------------------TPLLTAEHIVSDYK---------------------- 499 (732)
T ss_pred -------------------cccc---------------------ccccChhHhhhhhh----------------------
Confidence 0000 00123456788888
Q ss_pred CCCccccccCeEEEEEecCCCCcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHh-CCCCCCCCCEEEEcC
Q 002660 603 AKFPALRRRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVS-GHLSPSDFDAFICNS 681 (895)
Q Consensus 603 ~~~~~~~~~~kli~~DiDGTL~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~-l~l~~~~~d~~I~~n 681 (895)
++.+|+|++|+|||+....+..+...++.|... ++..|.|+|||....+..++.. .++ +++++|
T Consensus 500 ------~s~~rli~ldyd~t~~~~~~~~~~~~l~~L~~d---p~n~v~i~s~~~r~~l~~~~~~~~~l------gl~aEh 564 (732)
T KOG1050|consen 500 ------KSKKRLILLDYDLTLIPPRSIKAISILKDLCSD---PKNIVYIVSGRGRSVLEKWFFGCKNL------GLAAEH 564 (732)
T ss_pred ------hccceEEEecccccccCCCCchHHHHHHHHhcC---CCCeEEEEEccCchhhhhhccccccc------eeeccc
Confidence 789999999999999544444477778888887 6889999999999999777633 334 799999
Q ss_pred CceEeeccCCCCCCCcccchhhHHHhhcccCcchHHHHHHh----hhhhccccccccCCcccccccccCCceEEEEEeeC
Q 002660 682 GSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVR----WASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQK 757 (895)
Q Consensus 682 Ga~I~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 757 (895)
|.++..++.|.... .+.. |. +.+.++++. .+++..+.+ ...+.|++.+
T Consensus 565 G~f~r~~~~w~~~~---~~~~--------w~-~~v~~i~~~~~ert~GS~ie~k----------------~~~l~~hy~~ 616 (732)
T KOG1050|consen 565 GYFVRIPGKWETCV---LDLD--------WK-DLVKDIFQYYTERTPGSYIERK----------------ETALVWHYRN 616 (732)
T ss_pred CceeccCCceeeec---cccc--------HH-HHHHHHHHHHHhcCCCceeccc----------------CceEEEeeec
Confidence 99999876422111 2333 33 334444443 344443333 2334455543
Q ss_pred C--CCC-ccHHHHHHHHHhccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccC
Q 002660 758 P--GMT-PPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGG 834 (895)
Q Consensus 758 ~--~~~-~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ 834 (895)
. +.. ....++.++|......+.+. .+...+||-|.|+|||.|...+...+.-+++.+++ .||+.. | ++||+.
T Consensus 617 ad~~~g~~qA~el~~~l~~~~~~~~v~--~g~~~Vev~~~gvsk~~~~~~~~~~~~~~~df~~c-~g~d~t-D-ed~~~~ 691 (732)
T KOG1050|consen 617 ADPEFGELQAKELLEHLESKNEPVEVV--RGKHIVEVRPQGVSKGLAAERILSEMVKEPDFVLC-IGDDRT-D-EDMFEF 691 (732)
T ss_pred cCcchhHHHHHHHHHHhcccCCCeEEE--ecCceEEEcccccchHHHHHHHHHhcCCCcceEEE-ecCCCC-h-HHHHHH
Confidence 3 321 22356666666523334433 34348999999999999999999999833344555 777554 8 999987
Q ss_pred c
Q 002660 835 V 835 (895)
Q Consensus 835 a 835 (895)
.
T Consensus 692 ~ 692 (732)
T KOG1050|consen 692 I 692 (732)
T ss_pred H
Confidence 5
No 97
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.94 E-value=1.4e-24 Score=242.64 Aligned_cols=331 Identities=17% Similarity=0.175 Sum_probs=227.1
Q ss_pred CCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCccc
Q 002660 27 DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYI 106 (895)
Q Consensus 27 ~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~~~ 106 (895)
.+||..+++..|+++|.++| |+|+++|...... .+.. ...|+++.+++....
T Consensus 8 ~~gG~~~~~~~la~~l~~~G--~ev~v~~~~~~~~---------~~~~-------------~~~~~~~~~~~~~~~---- 59 (350)
T cd03785 8 GTGGHIFPALALAEELRERG--AEVLFLGTKRGLE---------ARLV-------------PKAGIPLHTIPVGGL---- 59 (350)
T ss_pred CchhhhhHHHHHHHHHHhCC--CEEEEEECCCcch---------hhcc-------------cccCCceEEEEecCc----
Confidence 57899999999999999999 9999998753110 0000 013678888876422
Q ss_pred ccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHH
Q 002660 107 AKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLL 186 (895)
Q Consensus 107 ~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~ 186 (895)
.+...+..+..+.. .+..+.+..+.+.+ ++||+||+|....+..+..+++..++|++++.|+..+..
T Consensus 60 ~~~~~~~~~~~~~~-~~~~~~~~~~~i~~-------~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~~~~----- 126 (350)
T cd03785 60 RRKGSLKKLKAPFK-LLKGVLQARKILKK-------FKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAVPGL----- 126 (350)
T ss_pred CCCChHHHHHHHHH-HHHHHHHHHHHHHh-------cCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCCccH-----
Confidence 11111111111111 11111122222222 789999999876667777778888999998776642210
Q ss_pred HHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEe
Q 002660 187 KQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAII 266 (895)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vi 266 (895)
. ++...+.+|.|+++|+...+. +.+ .++.++
T Consensus 127 ----------------~-----~~~~~~~~~~vi~~s~~~~~~-------~~~---------------------~~~~~i 157 (350)
T cd03785 127 ----------------A-----NRLLARFADRVALSFPETAKY-------FPK---------------------DKAVVT 157 (350)
T ss_pred ----------------H-----HHHHHHhhCEEEEcchhhhhc-------CCC---------------------CcEEEE
Confidence 0 223456789999999865443 112 289999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCC
Q 002660 267 PPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITT-LVKAFGECRPLRELA 345 (895)
Q Consensus 267 p~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~-ll~A~~~l~~~~~~~ 345 (895)
|||+|.+.+.+.. .+.++..++++++|+++|+....|+... +++|+..+. .+..
T Consensus 158 ~n~v~~~~~~~~~-----------------------~~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~--~~~~ 212 (350)
T cd03785 158 GNPVREEILALDR-----------------------ERARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELL--RKRL 212 (350)
T ss_pred CCCCchHHhhhhh-----------------------hHHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhh--ccCe
Confidence 9999987765321 0223344567788888888777777754 558888875 2333
Q ss_pred cEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHH
Q 002660 346 NLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEA 425 (895)
Q Consensus 346 ~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea 425 (895)
.+.+++|.+. .+++.+.+..+ .++|.|.|++ +++.++|+.| |++|.++ + +++++||
T Consensus 213 ~~~~i~G~g~------------~~~l~~~~~~~--~~~v~~~g~~--~~~~~~l~~a----d~~v~~s---g-~~t~~Ea 268 (350)
T cd03785 213 QVIHQTGKGD------------LEEVKKAYEEL--GVNYEVFPFI--DDMAAAYAAA----DLVISRA---G-ASTVAEL 268 (350)
T ss_pred EEEEEcCCcc------------HHHHHHHHhcc--CCCeEEeehh--hhHHHHHHhc----CEEEECC---C-HhHHHHH
Confidence 3334667762 23344455544 4689999996 7999999999 9999876 2 6899999
Q ss_pred HHcCCCEEEcCCCC--------chhccccCCCeEEeCCC--CHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHH
Q 002660 426 AAHGLPIVATKNGG--------PVDIHRVLDNGLLVDPH--DQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHC 495 (895)
Q Consensus 426 ~a~G~PVvas~~gg--------~~eiv~~~~~g~lv~p~--d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a 495 (895)
|++|+|||+++.++ ..+.+.+.++|+++++. |+++++++|.+++++++.+++++.++++.++.+..++++
T Consensus 269 m~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~i~ 348 (350)
T cd03785 269 AALGLPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSDPERLKAMAEAARSLARPDAAERIA 348 (350)
T ss_pred HHhCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 99999999987654 24566677899999987 899999999999999999999999999888888777766
Q ss_pred H
Q 002660 496 K 496 (895)
Q Consensus 496 ~ 496 (895)
+
T Consensus 349 ~ 349 (350)
T cd03785 349 D 349 (350)
T ss_pred h
Confidence 4
No 98
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.93 E-value=2.6e-24 Score=240.30 Aligned_cols=328 Identities=18% Similarity=0.182 Sum_probs=218.5
Q ss_pred CCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCccc
Q 002660 27 DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYI 106 (895)
Q Consensus 27 ~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~~~ 106 (895)
.+||......+|+++|.++| |+|+++|+... . ..+.. ...|+++++++..+.. ..
T Consensus 9 ~~~g~~~~~~~La~~L~~~g--~eV~vv~~~~~--~-------~~~~~-------------~~~g~~~~~i~~~~~~-~~ 63 (348)
T TIGR01133 9 GTGGHIFPALAVAEELIKRG--VEVLWLGTKRG--L-------EKRLV-------------PKAGIEFYFIPVGGLR-RK 63 (348)
T ss_pred ccHHHHhHHHHHHHHHHhCC--CEEEEEeCCCc--c-------hhccc-------------ccCCCceEEEeccCcC-CC
Confidence 45677766679999999999 99999986321 0 00000 1137888888764421 11
Q ss_pred ccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHH
Q 002660 107 AKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLL 186 (895)
Q Consensus 107 ~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~ 186 (895)
. +...+..+.. .+..+.++.+.+.+ ++||+||+|.......+..+++..++|+|++.|+..+..
T Consensus 64 ~---~~~~l~~~~~-~~~~~~~l~~~i~~-------~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~~~----- 127 (348)
T TIGR01133 64 G---SFRLIKTPLK-LLKAVFQARRILKK-------FKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAVPGL----- 127 (348)
T ss_pred C---hHHHHHHHHH-HHHHHHHHHHHHHh-------cCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCCccH-----
Confidence 1 1001111000 11112222222222 789999999876666677777888999986555432100
Q ss_pred HHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEe
Q 002660 187 KQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAII 266 (895)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vi 266 (895)
.+++..+.+|.+++.++...+.+ +..+|
T Consensus 128 ---------------------~~~~~~~~~d~ii~~~~~~~~~~-------------------------------~~~~i 155 (348)
T TIGR01133 128 ---------------------TNKLLSRFAKKVLISFPGAKDHF-------------------------------EAVLV 155 (348)
T ss_pred ---------------------HHHHHHHHhCeeEECchhHhhcC-------------------------------CceEE
Confidence 02335678999999998654321 34799
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCC
Q 002660 267 PPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITT-LVKAFGECRPLRELA 345 (895)
Q Consensus 267 p~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~-ll~A~~~l~~~~~~~ 345 (895)
|||+|...+.+... ..+++.+++.++|+++|+....|++.. +++|++.+.. ...
T Consensus 156 ~n~v~~~~~~~~~~-----------------------~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~--~~~ 210 (348)
T TIGR01133 156 GNPVRQEIRSLPVP-----------------------RERFGLREGKPTILVLGGSQGAKILNELVPKALAKLAE--KGI 210 (348)
T ss_pred cCCcCHHHhcccch-----------------------hhhcCCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhh--cCc
Confidence 99998765543210 112334567789999998888888654 5588888753 234
Q ss_pred cEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHH
Q 002660 346 NLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEA 425 (895)
Q Consensus 346 ~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea 425 (895)
++.+++|+++ ..++.+.+.++++...+.|. ..++.++|+.| |++|.++ | +++++||
T Consensus 211 ~~~~~~g~~~------------~~~l~~~~~~~~l~~~v~~~----~~~~~~~l~~a----d~~v~~~---g-~~~l~Ea 266 (348)
T TIGR01133 211 QIVHQTGKND------------LEKVKNVYQELGIEAIVTFI----DENMAAAYAAA----DLVISRA---G-ASTVAEL 266 (348)
T ss_pred EEEEECCcch------------HHHHHHHHhhCCceEEecCc----ccCHHHHHHhC----CEEEECC---C-hhHHHHH
Confidence 4534445442 24556667777775555555 23899999999 9999864 3 7899999
Q ss_pred HHcCCCEEEcCCCC-------chhccccCCCeEEeCCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHH
Q 002660 426 AAHGLPIVATKNGG-------PVDIHRVLDNGLLVDPHD--QQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCK 496 (895)
Q Consensus 426 ~a~G~PVvas~~gg-------~~eiv~~~~~g~lv~p~d--~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a~ 496 (895)
|++|+|+|+++.++ ..+++.++.+|+++++.| +++++++|.+++++++.+++|++++++.++.+..+++++
T Consensus 267 ~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~i~~ 346 (348)
T TIGR01133 267 AAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLDPANLEAMAEAARKLAKPDAAKRIAE 346 (348)
T ss_pred HHcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcCHHHHHHHHHHHHhcCCccHHHHHHh
Confidence 99999999988654 235777888999998876 999999999999999999999999988877666666654
No 99
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.93 E-value=6.8e-25 Score=235.08 Aligned_cols=242 Identities=17% Similarity=0.134 Sum_probs=150.2
Q ss_pred cCeEEEEEecCCCC---cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEee
Q 002660 611 RKHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYY 687 (895)
Q Consensus 611 ~~kli~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~ 687 (895)
..|+||+|+||||. ..+++.++++|++|+++ |+.|+|||||++..+..+++++++. +++||.||+.|++
T Consensus 3 ~~kli~~DlDGTLl~~~~~~~~~~~~ai~~l~~~----Gi~~~iaTgR~~~~~~~~~~~l~l~----~~~i~~nGa~i~~ 74 (273)
T PRK00192 3 MKLLVFTDLDGTLLDHHTYSYEPAKPALKALKEK----GIPVIPCTSKTAAEVEVLRKELGLE----DPFIVENGAAIYI 74 (273)
T ss_pred cceEEEEcCcccCcCCCCcCcHHHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCCC----CCEEEEcCcEEEe
Confidence 36899999999994 45778899999999997 5999999999999999999999983 4799999999997
Q ss_pred ccCCCC-CC--CcccchhhHHHhhcccCcchHHHHHHhhhhhcc-ccccc-----------cC--CcccccccccCCceE
Q 002660 688 STLNSE-DG--PFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVT-DKKAE-----------SG--EKVLTPAEQLSTNYC 750 (895)
Q Consensus 688 ~~~~~~-~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~-----------~~--~~~~~~~~~~~~~~k 750 (895)
.+.... .. ....+..| ........+.+.+++..+..... ..... .. .... +........+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 151 (273)
T PRK00192 75 PKNYFPFQPDGERLKGDYW--VIELGPPYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESA-RLAKDREFSE 151 (273)
T ss_pred cccccccCCccccccCCce--EEEcCCCHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHH-HHHHhcccCC
Confidence 542100 00 00000000 00011111222222211111000 00000 00 0000 0000001111
Q ss_pred EEEEeeCCCCCccHHHHHHHHHhccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCc-ccEEEEecCCCCCCcc
Q 002660 751 YAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVEL-SKMVVFVGESGDTDYE 829 (895)
Q Consensus 751 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~-~~viaf~Gd~nn~D~~ 829 (895)
..+.... ....+.+.+.+...+ +.++.+ + +++||+|.+ |||.|+++|++++|+++ +++++ +||+.| | +
T Consensus 152 ~~~~~~~---~~~~~~~~~~l~~~~--~~~~~~-~-~~~ei~~~~-~Kg~al~~l~~~~~i~~~~~v~~-~GDs~N-D-i 220 (273)
T PRK00192 152 PFLWNGS---EAAKERFEEALKRLG--LKVTRG-G-RFLHLLGGG-DKGKAVRWLKELYRRQDGVETIA-LGDSPN-D-L 220 (273)
T ss_pred ceeecCc---hHHHHHHHHHHHHcC--CEEEEC-C-eEEEEeCCC-CHHHHHHHHHHHHhccCCceEEE-EcCChh-h-H
Confidence 1111111 123455666664432 444443 4 499999999 99999999999999999 99999 777777 7 9
Q ss_pred ccccCcceEEEecCcccccccc----ccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHHHh
Q 002660 830 GLLGGVHKTVILKGICSSSSNQ----IHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQL 890 (895)
Q Consensus 830 eMl~~ag~gVaMgNa~~~~~~~----~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~ 890 (895)
+||+.+|++|||+||. +++| ..+. ...++|.++.+|||+++|+++
T Consensus 221 ~m~~~ag~~vam~NA~--~~~k~~~~~~a~--------------~~v~~~~~~~~~Gv~~~l~~~ 269 (273)
T PRK00192 221 PMLEAADIAVVVPGPD--GPNPPLLPGIAD--------------GEFILASAPGPEGWAEAINKL 269 (273)
T ss_pred HHHHhCCeeEEeCCCC--CCCcccCccccC--------------CceEEecCCCcHHHHHHHHHH
Confidence 9999999999999999 4444 1110 123444899999999999974
No 100
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=99.92 E-value=8.5e-25 Score=246.90 Aligned_cols=314 Identities=15% Similarity=0.111 Sum_probs=206.1
Q ss_pred CCcEEEeccccchhHHHHHhccC-CCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeC
Q 002660 144 WPVAIHGHYADAGDSAALLSGAL-NVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 222 (895)
Q Consensus 144 ~pDvVh~h~~~~~~~~~~~~~~~-~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~ 222 (895)
.-|+|..|.+...+++..+.++. ..++.+.+|-.++..- ++ ....+... -...+-.||.|-..
T Consensus 141 ~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~e--~f-----------r~lP~r~e---iL~glL~aDlIgFq 204 (474)
T PF00982_consen 141 PGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIPFPSSE--IF-----------RCLPWREE---ILRGLLGADLIGFQ 204 (474)
T ss_dssp TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S----HH--HH-----------TTSTTHHH---HHHHHTTSSEEEES
T ss_pred CCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecCCCCHH--HH-----------hhCCcHHH---HHHHhhcCCEEEEe
Confidence 46899999987777887777654 6788999998765321 11 00111111 22467899999999
Q ss_pred ChHHHHHHHhhhcCCChHHHHHHHHhHhc---cccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 002660 223 TRQEIEEQWRLYDGFDPVLERKLRARIKR---NVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPP 299 (895)
Q Consensus 223 s~~~~~~~~~~~~~~~~~~~~~l~~~~~~---gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 299 (895)
+...++.+... ..+.|+.+... +|.+.|+.+ ++.++|.|||++.|.....+ +....
T Consensus 205 t~~~~~nFl~~-------~~r~lg~~~~~~~~~v~~~Gr~v-~v~~~pigId~~~~~~~~~~-------------~~v~~ 263 (474)
T PF00982_consen 205 TFEYARNFLSC-------CKRLLGLEVDSDRGTVEYNGRRV-RVGVFPIGIDPDAFAQLARS-------------PEVQE 263 (474)
T ss_dssp SHHHHHHHHHH-------HHHHS-EEEEETTE-EEETTEEE-EEEE------HHHHHHHHH--------------S---H
T ss_pred cHHHHHHHHHH-------HHHHcCCcccCCCceEEECCEEE-EEEEeeccCChHHHHhhccC-------------hHHHH
Confidence 99888776443 23444444322 477777777 99999999999988632211 11223
Q ss_pred hhHHhhhhcCCCC-CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEEE--E----ecCCCccccccchHHHHHH
Q 002660 300 IWSEIMRFFTNPR-KPVILALARPDPKKNITTLVKAFGECRPLRELA--NLTLI--M----GNRDGIDEMSSTSASVLLS 370 (895)
Q Consensus 300 ~~~~~~~~~~~~~-~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~--~l~li--v----G~~~~~~~~~~~~~~~~~~ 370 (895)
....+++.. .+ .++|+.++|+|+.||+...++||+++.+.+|.+ +++++ + .+.++|++++++..+.+++
T Consensus 264 ~~~~l~~~~--~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~~~~~y~~~~~~v~~~v~~ 341 (474)
T PF00982_consen 264 RAEELREKF--KGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSREDVPEYQELRREVEELVGR 341 (474)
T ss_dssp HHHHHHHHT--TT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-STTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhc--CCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccCccchhHHHHHHHHHHHHHH
Confidence 333444433 34 589999999999999999999999998777765 45542 2 2234456788899999999
Q ss_pred HHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHc-----CCCEEEcCCCCchhccc
Q 002660 371 VLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH-----GLPIVATKNGGPVDIHR 445 (895)
Q Consensus 371 l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~-----G~PVvas~~gg~~eiv~ 445 (895)
||+..+..+|.+.+++.+.++.+++.++|+.| ||+++||++|||||+++||++| |+.|+|..+|+..++
T Consensus 342 IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~a----Dv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaGaa~~L-- 415 (474)
T PF00982_consen 342 INGKYGTPDWTPIIYIYRSLSFEELLALYRAA----DVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAGAAEQL-- 415 (474)
T ss_dssp HHHHH-BTTB-SEEEE-S---HHHHHHHHHH-----SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTBGGGGT---
T ss_pred HHhhcccCCceeEEEEecCCCHHHHHHHHHhh----hhEEecchhhccCCcceEEEEEecCCCCceEeeccCCHHHHc--
Confidence 99999999999999999999999999999999 9999999999999999999999 778888888888776
Q ss_pred cCC-CeEEeCCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHc
Q 002660 446 VLD-NGLLVDPHDQQSVADALLKLVADKQ-LWARCRQNGLKNIHLFSWPEHCKTYLSRIAG 504 (895)
Q Consensus 446 ~~~-~g~lv~p~d~~~la~ai~~ll~~~~-~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~ 504 (895)
. .+++|||+|++++|++|.++|+++. +++...+..++.+..+|...|++.|++.+++
T Consensus 416 --~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 416 --SEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLRDLKR 474 (474)
T ss_dssp --TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHHT
T ss_pred --CCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHHHhhC
Confidence 4 3499999999999999999999665 5566666677777999999999999998763
No 101
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=99.92 E-value=9e-24 Score=233.02 Aligned_cols=314 Identities=14% Similarity=0.139 Sum_probs=239.4
Q ss_pred CcEEEeccccchhHHHHHhccC-CCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCC
Q 002660 145 PVAIHGHYADAGDSAALLSGAL-NVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITST 223 (895)
Q Consensus 145 pDvVh~h~~~~~~~~~~~~~~~-~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s 223 (895)
=|+|..|.+...+++..+.++. ..++.|.+|-.++..- ++. ...+... -...+-.||.|-.-+
T Consensus 148 gDiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiPfPssE--vfr-----------~lP~r~e---Il~gll~~dligFqt 211 (486)
T COG0380 148 GDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPSSE--VFR-----------CLPWREE---ILEGLLGADLIGFQT 211 (486)
T ss_pred CCEEEEEechhhhhHHHHHHhCCCceEEEEEeCCCCCHH--HHh-----------hCchHHH---HHHHhhcCCeeEecC
Confidence 3999999987777777777654 4678889998765331 110 0001111 123577999999999
Q ss_pred hHHHHHHHhhhcCCChHHHHHHHHhHhcccccc---CCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCch
Q 002660 224 RQEIEEQWRLYDGFDPVLERKLRARIKRNVSCY---GKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPI 300 (895)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~---g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (895)
...++.+.... .+.++.+...++..- |+.. ++..+|.|||+..|.....+. .....
T Consensus 212 ~~y~~nF~~~~-------~r~~~~~~~~~~~~~~~~~~~v-~v~a~PIgID~~~~~~~~~~~-------------~v~~~ 270 (486)
T COG0380 212 ESYARNFLDLC-------SRLLGVTGDADIRFNGADGRIV-KVGAFPIGIDPEEFERALKSP-------------SVQEK 270 (486)
T ss_pred HHHHHHHHHHH-------HHhccccccccccccccCCceE-EEEEEeeecCHHHHHHhhcCC-------------chhhH
Confidence 88877665543 233332222333333 3333 899999999999997543211 12233
Q ss_pred hHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEEEE------ecCCCccccccchHHHHHHHH
Q 002660 301 WSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELA--NLTLIM------GNRDGIDEMSSTSASVLLSVL 372 (895)
Q Consensus 301 ~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~--~l~liv------G~~~~~~~~~~~~~~~~~~l~ 372 (895)
+.++++.. ..++++|+.++|+|+.||+...+.||++|++.+|.+ +++++. ++.+.|+.++.+..+.+++||
T Consensus 271 ~~el~~~~-~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN 349 (486)
T COG0380 271 VLELKAEL-GRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRIN 349 (486)
T ss_pred HHHHHHHh-cCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCccccHHHHHHHHHHHHHHHHHH
Confidence 44444443 233899999999999999999999999998767766 444322 344455568888999999999
Q ss_pred HHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHc-----CCCEEEcCCCCchhccccC
Q 002660 373 KLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH-----GLPIVATKNGGPVDIHRVL 447 (895)
Q Consensus 373 ~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~-----G~PVvas~~gg~~eiv~~~ 447 (895)
+.++..++.|..+|+..++.+++.++|+.| |+++++|++|||+||++||+|| |+.|++..+|+..++
T Consensus 350 ~~fG~~~~~Pv~~l~~~~~~~~l~al~~~a----Dv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L---- 421 (486)
T COG0380 350 GEFGSLSWTPVHYLHRDLDRNELLALYRAA----DVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASEL---- 421 (486)
T ss_pred hhcCCCCcceeEEEeccCCHHHHHHHHhhh----ceeeeccccccccHHHHHHHHhhcCCCCcEEEeccccchhhh----
Confidence 999999999999999999999999999999 9999999999999999999999 899999999999998
Q ss_pred CCeEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHc
Q 002660 448 DNGLLVDPHDQQSVADALLKLVADK-QLWARCRQNGLKNIHLFSWPEHCKTYLSRIAG 504 (895)
Q Consensus 448 ~~g~lv~p~d~~~la~ai~~ll~~~-~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~ 504 (895)
..+++|||+|.+++|++|.++|+++ +++++..+..++.+..++...|+.+|++.+..
T Consensus 422 ~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la~ 479 (486)
T COG0380 422 RDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSFLDDLAQ 479 (486)
T ss_pred ccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 5599999999999999999999955 55666666667777899999999999999886
No 102
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=99.90 E-value=8.5e-23 Score=216.42 Aligned_cols=195 Identities=10% Similarity=0.051 Sum_probs=129.2
Q ss_pred ccCeEEEEEecCCCCc--------chhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcC
Q 002660 610 RRKHIFVISVDCDSTT--------GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNS 681 (895)
Q Consensus 610 ~~~kli~~DiDGTL~~--------~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~n 681 (895)
..+.+|++|+||||.. .+++.++++|++|++. +|+.|+|+|||++..+.++++.+++ .+||+|
T Consensus 12 ~~~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~---~g~~v~i~SGR~~~~~~~~~~~~~~------~~i~~n 82 (266)
T PRK10187 12 SANYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATA---NDGALALISGRSMVELDALAKPYRF------PLAGVH 82 (266)
T ss_pred CCCEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhC---CCCcEEEEeCCCHHHHHHhcCcccc------eEEEeC
Confidence 3468999999999942 5678999999999984 3699999999999999999988765 489999
Q ss_pred CceEeeccCCCCCCCcccchhhHHHhhcccCcchHHHHHHh----hhhhccccccccCCcccccccccCCceEEEEEeeC
Q 002660 682 GSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVR----WASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQK 757 (895)
Q Consensus 682 Ga~I~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 757 (895)
|++|+..+... +...+...|. +.+...+.. .++...+.+ ...+.++++.
T Consensus 83 Ga~i~~~~~~~----------~~~~l~~~~~-~~i~~~l~~~~~~~pg~~ve~k----------------~~~~~~h~r~ 135 (266)
T PRK10187 83 GAERRDINGKT----------HIVHLPDAIA-RDISVQLHTALAQLPGAELEAK----------------GMAFALHYRQ 135 (266)
T ss_pred CCeeecCCCCe----------eeccCChhHH-HHHHHHHHHHhccCCCcEEEeC----------------CcEEEEECCC
Confidence 99998653210 0001111111 111111211 112222111 1223344432
Q ss_pred CC-CCccHHHHHHHHHhccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCc-
Q 002660 758 PG-MTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGV- 835 (895)
Q Consensus 758 ~~-~~~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~a- 835 (895)
.. ....+.++.+.+......+. +.+.. .++||+|+++|||.||++|++++|++.+++++ +||+.| | ++||+.+
T Consensus 136 ~~~~~~~~~~l~~~i~~~~~~~~-~~~g~-~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~-~GD~~n-D-~~mf~~~~ 210 (266)
T PRK10187 136 APQHEDALLALAQRITQIWPQLA-LQPGK-CVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF-VGDDLT-D-EAGFAVVN 210 (266)
T ss_pred CCccHHHHHHHHHHHHhhCCceE-EeCCC-EEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE-EcCCcc-H-HHHHHHHH
Confidence 21 11223334434433222222 33444 59999999999999999999999999999988 666666 7 9999999
Q ss_pred ---ceEEEecCcc
Q 002660 836 ---HKTVILKGIC 845 (895)
Q Consensus 836 ---g~gVaMgNa~ 845 (895)
|.||+||||.
T Consensus 211 ~~~g~~vavg~a~ 223 (266)
T PRK10187 211 RLGGISVKVGTGA 223 (266)
T ss_pred hcCCeEEEECCCC
Confidence 9999999998
No 103
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.90 E-value=9.2e-22 Score=225.60 Aligned_cols=284 Identities=15% Similarity=0.204 Sum_probs=190.5
Q ss_pred CCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeC
Q 002660 143 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 222 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~ 222 (895)
++||+||++...........++..++|++++.|.+....+.. |+...++ ++..++.+|.|++.
T Consensus 123 ~~Pd~v~~~~~~~~~~~l~~~~~~~ip~vl~~~~~~~~s~~~---------------~~~~~~~--~r~~~~~~d~ii~~ 185 (425)
T PRK05749 123 WRPKLVIIMETELWPNLIAELKRRGIPLVLANARLSERSFKR---------------YQKFKRF--YRLLFKNIDLVLAQ 185 (425)
T ss_pred hCCCEEEEEecchhHHHHHHHHHCCCCEEEEeccCChhhHHH---------------HHHHHHH--HHHHHHhCCEEEEC
Confidence 789999988543222233345677999998766543221110 1111121 44568899999999
Q ss_pred ChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhH
Q 002660 223 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 302 (895)
Q Consensus 223 s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (895)
|+...+.+.. +|.+.+ +.++||+ +.+.+.+.. .......
T Consensus 186 S~~~~~~l~~-----------------------~g~~~~-i~vi~n~-~~d~~~~~~----------------~~~~~~~ 224 (425)
T PRK05749 186 SEEDAERFLA-----------------------LGAKNE-VTVTGNL-KFDIEVPPE----------------LAARAAT 224 (425)
T ss_pred CHHHHHHHHH-----------------------cCCCCC-cEecccc-cccCCCChh----------------hHHHHHH
Confidence 9987776533 233333 7888884 333332110 0001112
Q ss_pred HhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCC
Q 002660 303 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY 381 (895)
Q Consensus 303 ~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~ 381 (895)
.+.++. +++++++++|+. .|+.+.+++|+..+.+. .+++.+ |+|++++. ..++.+.+++.++.
T Consensus 225 ~r~~~~--~~~~vil~~~~~--~~~~~~ll~A~~~l~~~--~~~~~liivG~g~~r----------~~~l~~~~~~~gl~ 288 (425)
T PRK05749 225 LRRQLA--PNRPVWIAASTH--EGEEELVLDAHRALLKQ--FPNLLLILVPRHPER----------FKEVEELLKKAGLS 288 (425)
T ss_pred HHHHhc--CCCcEEEEeCCC--chHHHHHHHHHHHHHHh--CCCcEEEEcCCChhh----------HHHHHHHHHhCCCc
Confidence 223333 467888888874 68899999999988643 345554 77877631 24566777777775
Q ss_pred CcEEeCCCCC------------CCCHHHHHHHhhcCCcEEEe-cCCCCCCchHHHHHHHcCCCEEEcCC-CCchhccccC
Q 002660 382 GQVAYPKHHK------------QSDVPEIYRLAAKTKGVFIN-PAFIEPFGLTLIEAAAHGLPIVATKN-GGPVDIHRVL 447 (895)
Q Consensus 382 ~~v~~~g~~~------------~~el~~ly~~A~~~~dv~v~-ps~~Eg~gl~~~Ea~a~G~PVvas~~-gg~~eiv~~~ 447 (895)
. +.|.+..+ ..++..+|+.| |++++ +|+.|++|.+++||||||+|||+++. ++..|+++..
T Consensus 289 ~-~~~~~~~~~~~~~~v~l~~~~~el~~~y~~a----Di~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~ 363 (425)
T PRK05749 289 Y-VRRSQGEPPSADTDVLLGDTMGELGLLYAIA----DIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERL 363 (425)
T ss_pred E-EEccCCCCCCCCCcEEEEecHHHHHHHHHhC----CEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHH
Confidence 2 44433211 35899999999 99655 67889999999999999999999874 6666665542
Q ss_pred -CCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccC
Q 002660 448 -DNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKP 507 (895)
Q Consensus 448 -~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~~~ 507 (895)
.+|+++.+.|+++++++|.++++|++.++++++++++.++.. ....+++++.+...++
T Consensus 364 ~~~g~~~~~~d~~~La~~l~~ll~~~~~~~~m~~~a~~~~~~~--~~~~~~~~~~l~~~l~ 422 (425)
T PRK05749 364 LQAGAAIQVEDAEDLAKAVTYLLTDPDARQAYGEAGVAFLKQN--QGALQRTLQLLEPYLP 422 (425)
T ss_pred HHCCCeEEECCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhC--ccHHHHHHHHHHHhcc
Confidence 467888899999999999999999999999999999999533 2556677777765543
No 104
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.88 E-value=7.1e-21 Score=215.03 Aligned_cols=264 Identities=13% Similarity=0.073 Sum_probs=180.6
Q ss_pred CCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeC
Q 002660 143 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 222 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~ 222 (895)
.+||+||++++.........+...++|++.+.+++.... + +..+.+|.++++
T Consensus 103 ~~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~td~~~~~----------------------~------~~~~~ad~i~~~ 154 (380)
T PRK13609 103 EKPDIVINTFPIIAVPELKKQTGISIPTYNVLTDFCLHK----------------------I------WVHREVDRYFVA 154 (380)
T ss_pred hCcCEEEEcChHHHHHHHHHhcCCCCCeEEEeCCCCCCc----------------------c------cccCCCCEEEEC
Confidence 789999999875544444444556799887666642211 1 246789999999
Q ss_pred ChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhH
Q 002660 223 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 302 (895)
Q Consensus 223 s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (895)
|+...+.+.+. |.+.+++.+++++++.. |.+.. ....
T Consensus 155 s~~~~~~l~~~-----------------------gi~~~ki~v~G~p~~~~-f~~~~-------------------~~~~ 191 (380)
T PRK13609 155 TDHVKKVLVDI-----------------------GVPPEQVVETGIPIRSS-FELKI-------------------NPDI 191 (380)
T ss_pred CHHHHHHHHHc-----------------------CCChhHEEEECcccChH-HcCcC-------------------CHHH
Confidence 98766654331 22233788876665432 32111 0112
Q ss_pred HhhhhcCCCCCc-EEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCC
Q 002660 303 EIMRFFTNPRKP-VILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY 381 (895)
Q Consensus 303 ~~~~~~~~~~~~-~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~ 381 (895)
.+.+++..++++ ++++.|++...|++..+++++... +...+.+++|.+. .+.+++.++++..+
T Consensus 192 ~~~~~~l~~~~~~il~~~G~~~~~k~~~~li~~l~~~----~~~~~viv~G~~~----------~~~~~l~~~~~~~~-- 255 (380)
T PRK13609 192 IYNKYQLCPNKKILLIMAGAHGVLGNVKELCQSLMSV----PDLQVVVVCGKNE----------ALKQSLEDLQETNP-- 255 (380)
T ss_pred HHHHcCCCCCCcEEEEEcCCCCCCcCHHHHHHHHhhC----CCcEEEEEeCCCH----------HHHHHHHHHHhcCC--
Confidence 344556566655 455668888889999999987643 2233433334331 12345555655544
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcC-CCCch----hccccCCCeEEeCCC
Q 002660 382 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK-NGGPV----DIHRVLDNGLLVDPH 456 (895)
Q Consensus 382 ~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~-~gg~~----eiv~~~~~g~lv~p~ 456 (895)
++|.|+|++ +++.++|+.| |++|. ++.|++++|||+||+|||+++ .+|.. +++.. +|..+.+.
T Consensus 256 ~~v~~~g~~--~~~~~l~~~a----D~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~--~G~~~~~~ 323 (380)
T PRK13609 256 DALKVFGYV--ENIDELFRVT----SCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER--KGAAVVIR 323 (380)
T ss_pred CcEEEEech--hhHHHHHHhc----cEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh--CCcEEEEC
Confidence 679999996 5799999999 99874 466999999999999999976 55531 23332 34444457
Q ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcc
Q 002660 457 DQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGC 505 (895)
Q Consensus 457 d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~ 505 (895)
|+++++++|.+++++++.++++++++++..+.++++.+++.+++.+...
T Consensus 324 ~~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 324 DDEEVFAKTEALLQDDMKLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred CHHHHHHHHHHHHCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 9999999999999999999999999988777889999999998887644
No 105
>PTZ00174 phosphomannomutase; Provisional
Probab=99.87 E-value=1.4e-21 Score=205.80 Aligned_cols=210 Identities=14% Similarity=0.098 Sum_probs=120.9
Q ss_pred cCeEEEEEecCCC---CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEee
Q 002660 611 RKHIFVISVDCDS---TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYY 687 (895)
Q Consensus 611 ~~kli~~DiDGTL---~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~ 687 (895)
..|+|++|+|||| .+.+++.++++|++++++ |+.|+|||||++..+.+.++..... ..+++||+||+.|+.
T Consensus 4 ~~klia~DlDGTLL~~~~~is~~~~~ai~~l~~~----Gi~~viaTGR~~~~i~~~l~~~~~~--~~~~~I~~NGa~I~~ 77 (247)
T PTZ00174 4 KKTILLFDVDGTLTKPRNPITQEMKDTLAKLKSK----GFKIGVVGGSDYPKIKEQLGEDVLE--DFDYVFSENGLVAYK 77 (247)
T ss_pred CCeEEEEECcCCCcCCCCCCCHHHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHhhhhhc--ccCeEEeCCceEEEE
Confidence 3689999999999 356889999999999998 5999999999999998888754321 135789999999996
Q ss_pred ccCCCCCCCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEEEeeC----------
Q 002660 688 STLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQK---------- 757 (895)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~---------- 757 (895)
.+. ..... .+......+.+.+++..................+..... ...........
T Consensus 78 ~~~------~i~~~----~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 145 (247)
T PTZ00174 78 DGE------LFHSQ----SILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYRN--GMINISPIGRNCSQEERDEFE 145 (247)
T ss_pred CCe------EEEEE----cchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcCC--ceEEeccccccCCHHHHHHHH
Confidence 431 11001 000001112222222111000000000000000000000 00000000000
Q ss_pred --CCCCccHHHHHHHHHhccCeEEEEEecC-CeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecC----CCCCCccc
Q 002660 758 --PGMTPPVKELRKVLRIQALRCHVIYCQN-GSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGE----SGDTDYEG 830 (895)
Q Consensus 758 --~~~~~~~~~l~~~l~~~~~~~~~~~s~~-~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd----~nn~D~~e 830 (895)
.......+++.+.+......+.+.++.+ ..++||+|+|+|||.||++|+++ ++++|| +|| +.| | ++
T Consensus 146 ~~~~~~~~~~~~~~~l~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~----~~evia-fGD~~~~~~N-D-ie 218 (247)
T PTZ00174 146 KYDKEHHIREKFIQDLKKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND----FKEIHF-FGDKTFEGGN-D-YE 218 (247)
T ss_pred hcCCcchHHHHHHHHHHHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh----hhhEEE-EcccCCCCCC-c-Hh
Confidence 0001123455555544333345555543 24899999999999999999999 589999 666 667 7 99
Q ss_pred cccCc-ceEEEecCcc
Q 002660 831 LLGGV-HKTVILKGIC 845 (895)
Q Consensus 831 Ml~~a-g~gVaMgNa~ 845 (895)
||+.+ -.|++++||.
T Consensus 219 Ml~~~~~~g~~v~n~~ 234 (247)
T PTZ00174 219 IYNDPRTIGHSVKNPE 234 (247)
T ss_pred hhhcCCCceEEeCCHH
Confidence 99965 3455556988
No 106
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=99.87 E-value=5.1e-21 Score=217.76 Aligned_cols=249 Identities=13% Similarity=0.148 Sum_probs=155.7
Q ss_pred ccccccCeEEEEEecCCCC---cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCC
Q 002660 606 PALRRRKHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSG 682 (895)
Q Consensus 606 ~~~~~~~kli~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nG 682 (895)
|.....+|+||+|+||||. +...+.++++|++++++ |+.|++||||++..+..+++++++. +++||+||
T Consensus 410 ~~~~~~~KLIfsDLDGTLLd~d~~i~~~t~eAL~~L~ek----GI~~VIATGRs~~~i~~l~~~Lgl~----~~~I~eNG 481 (694)
T PRK14502 410 PSSGQFKKIVYTDLDGTLLNPLTYSYSTALDALRLLKDK----ELPLVFCSAKTMGEQDLYRNELGIK----DPFITENG 481 (694)
T ss_pred CCcCceeeEEEEECcCCCcCCCCccCHHHHHHHHHHHHc----CCeEEEEeCCCHHHHHHHHHHcCCC----CeEEEcCC
Confidence 3335578999999999993 34567889999999998 5999999999999999999999983 68999999
Q ss_pred ceEeeccCCCCCCCcccchhhHH--HhhcccCcchHHHHHHhhhhhcc---c----c--ccccCC-cc-------cc---
Q 002660 683 SDLYYSTLNSEDGPFVVDFYYHS--HIEYRWGGEGLRKTLVRWASQVT---D----K--KAESGE-KV-------LT--- 740 (895)
Q Consensus 683 a~I~~~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~---~----~--~~~~~~-~~-------~~--- 740 (895)
+.|+...+... .....+..... .....+..+.+.++++....... . . ...... .. ++
T Consensus 482 A~I~~~~~~~~-~~~~~~~~~~~~iI~~~~l~~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei~~~TgL~ 560 (694)
T PRK14502 482 GAIFIPKDYFR-LPFAYDRVAGNYLVIELGMAYKDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDVSRLTDLN 560 (694)
T ss_pred CEEEECCCccc-ccccccccCCCeEEEEcCCCHHHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHHHHhhCCC
Confidence 99998653110 00000000000 01112222333333332221000 0 0 000000 00 00
Q ss_pred -----cccccCCceEEEEEeeCCCCCccHHHHHHHHHhccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCccc
Q 002660 741 -----PAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSK 815 (895)
Q Consensus 741 -----~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~ 815 (895)
.........|+.+. .+ ...++++.+.+...+ +++.. .+ +++||+ +++|||+||++|++++|++.++
T Consensus 561 ~~~a~~a~~Re~seKIl~~-gd---~e~Leel~~~L~~~~--l~v~~-g~-rfleI~-~gvdKG~AL~~L~e~~gI~~~e 631 (694)
T PRK14502 561 LKQAELAKQREYSETVHIE-GD---KRSTNIVLNHIQQSG--LEYSF-GG-RFYEVT-GGNDKGKAIKILNELFRLNFGN 631 (694)
T ss_pred HHHHHHHhhccCceeEEEc-CC---HHHHHHHHHHHHHcC--cEEEE-CC-EEEEeC-CCCCHHHHHHHHHHHhCCCccc
Confidence 00001112343332 11 234567777776653 44443 44 599999 5999999999999999999999
Q ss_pred EEEE-ecCCCCCCccccccCcceEEEecCccccccccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHHHh
Q 002660 816 MVVF-VGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQL 890 (895)
Q Consensus 816 viaf-~Gd~nn~D~~eMl~~ag~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~ 890 (895)
+++| .||+.| | ++||+.||+||||++-...-... ..+... .|+....-|-.+|++++
T Consensus 632 ViafalGDs~N-D-isMLe~Ag~gVAM~~~~~~~~~l---------------~~~~~~-~~~~~GP~GW~eai~~~ 689 (694)
T PRK14502 632 IHTFGLGDSEN-D-YSMLETVDSPILVQRPGNKWHKM---------------RLRNPS-YVKGVGPEGFSRAVTDI 689 (694)
T ss_pred eEEEEcCCcHh-h-HHHHHhCCceEEEcCCCCCCCcc---------------CCCCce-ecCCCCcHHHHHHHHHH
Confidence 9995 288888 8 99999999999998776222111 122223 56888888888888765
No 107
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.87 E-value=5.9e-20 Score=206.62 Aligned_cols=266 Identities=17% Similarity=0.133 Sum_probs=178.0
Q ss_pred CCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeC
Q 002660 143 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 222 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~ 222 (895)
.+..|++++.+.+..++.. ..+.++|++.+|.+.... +. ... .. ..|+..++.||.|+++
T Consensus 101 ~~~~i~~~~~P~~~~~~~~---~~~~~~Vyd~~D~~~~~~------~~-~~~--------~~--~~e~~~~~~ad~vi~~ 160 (373)
T cd04950 101 FGRPILWYYTPYTLPVAAL---LQASLVVYDCVDDLSAFP------GG-PPE--------LL--EAERRLLKRADLVFTT 160 (373)
T ss_pred CCCcEEEEeCccHHHHHhh---cCCCeEEEEcccchhccC------CC-CHH--------HH--HHHHHHHHhCCEEEEC
Confidence 4566777766544333332 557899999998654321 10 110 01 3477889999999999
Q ss_pred ChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhH
Q 002660 223 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 302 (895)
Q Consensus 223 s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (895)
|+...+.+.. +. .++.+||||+|.+.|.+...... . .
T Consensus 161 S~~l~~~~~~-~~-------------------------~~i~~i~ngvd~~~f~~~~~~~~---------------~-~- 197 (373)
T cd04950 161 SPSLYEAKRR-LN-------------------------PNVVLVPNGVDYEHFAAARDPPP---------------P-P- 197 (373)
T ss_pred CHHHHHHHhh-CC-------------------------CCEEEcccccCHHHhhcccccCC---------------C-h-
Confidence 9876654322 11 28999999999999875431110 0 0
Q ss_pred HhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCC
Q 002660 303 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYG 382 (895)
Q Consensus 303 ~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~ 382 (895)
+.....++++++|+|++.+.++++.+.++... .++..+ +++|.++..... ......+
T Consensus 198 ---~~~~~~~~~~i~y~G~l~~~~d~~ll~~la~~----~p~~~~-vliG~~~~~~~~---------------~~~~~~~ 254 (373)
T cd04950 198 ---ADLAALPRPVIGYYGAIAEWLDLELLEALAKA----RPDWSF-VLIGPVDVSIDP---------------SALLRLP 254 (373)
T ss_pred ---hHHhcCCCCEEEEEeccccccCHHHHHHHHHH----CCCCEE-EEECCCcCccCh---------------hHhccCC
Confidence 01123467899999999998887766555443 344444 477876321110 1111247
Q ss_pred cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCC-----CCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCC
Q 002660 383 QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFI-----EPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHD 457 (895)
Q Consensus 383 ~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~-----Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d 457 (895)
+|+|+|+++.++++.+|+.+ |++++|+.. +++|++++||||||+|||+|+.++..+ ....++ +.++|
T Consensus 255 nV~~~G~~~~~~l~~~l~~~----Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~~~---~~~~~~-~~~~d 326 (373)
T cd04950 255 NVHYLGPKPYKELPAYLAGF----DVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEVRR---YEDEVV-LIADD 326 (373)
T ss_pred CEEEeCCCCHHHHHHHHHhC----CEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHHHh---hcCcEE-EeCCC
Confidence 89999999999999999999 999999753 467999999999999999998765444 333344 44679
Q ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHc
Q 002660 458 QQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAG 504 (895)
Q Consensus 458 ~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~ 504 (895)
+++++++|.+++.++...... ...+.++.|||+..++++++.+.+
T Consensus 327 ~~~~~~ai~~~l~~~~~~~~~--~~~~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 327 PEEFVAAIEKALLEDGPARER--RRLRLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred HHHHHHHHHHHHhcCCchHHH--HHHHHHHHCCHHHHHHHHHHHHHh
Confidence 999999999987643221111 122245799999999999977664
No 108
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.87 E-value=1.2e-21 Score=203.60 Aligned_cols=205 Identities=15% Similarity=0.101 Sum_probs=124.8
Q ss_pred EEEEEecCCCCc--c-hhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeeccC
Q 002660 614 IFVISVDCDSTT--G-LLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTL 690 (895)
Q Consensus 614 li~~DiDGTL~~--~-~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~~ 690 (895)
+|++||||||.. . .++.++++|++++++ |+.|++||||++..+.++++.+++. ..++||+||+.|+....
T Consensus 1 ~i~~DlDGTLL~~~~~~~~~~~~~l~~l~~~----gi~~~i~TgR~~~~~~~~~~~l~~~---~~~~I~~NGa~i~~~~~ 73 (221)
T TIGR02463 1 WVFSDLDGTLLDSHSYDWQPAAPWLTRLQEA----GIPVILCTSKTAAEVEYLQKALGLT---GDPYIAENGAAIHLEEL 73 (221)
T ss_pred CEEEeCCCCCcCCCCCCcHHHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHcCCC---CCcEEEeCCcEEEcCcc
Confidence 589999999942 2 455599999999987 6999999999999999999999983 14799999999987532
Q ss_pred CCCCCCcccchhhHHHhhcccCcchHHHHHHhhhhh---ccccccc--------cCCcccccc-cccCCceEEEEEeeCC
Q 002660 691 NSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQ---VTDKKAE--------SGEKVLTPA-EQLSTNYCYAFSVQKP 758 (895)
Q Consensus 691 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~--------~~~~~~~~~-~~~~~~~k~~~~~~~~ 758 (895)
+.....+.. ....+..+.+.++++.+... ....... ...-..... .......+..+... .
T Consensus 74 ~~~~~~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 145 (221)
T TIGR02463 74 WREEPGYPR-------IILGISYGIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLWR-D 145 (221)
T ss_pred cccCCCceE-------EecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEec-C
Confidence 210000000 00001111111211110000 0000000 000000000 00001122222220 1
Q ss_pred CCCccHHHHHHHHHhccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceE
Q 002660 759 GMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKT 838 (895)
Q Consensus 759 ~~~~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~g 838 (895)
. ....+++.+.+...+ +.+..+ +. ++||+|++++||.|++++++++|++++++++ +||+.| | ++||+.+|.|
T Consensus 146 ~-~~~~~~~~~~l~~~~--~~~~~~-~~-~~ei~~~~~~Kg~al~~l~~~lgi~~~~vi~-~GD~~N-D-i~ml~~ag~~ 217 (221)
T TIGR02463 146 S-DSRMPRFTALLADLG--LAIVQG-NR-FSHVLGASSSKGKAANWLKATYNQPDVKTLG-LGDGPN-D-LPLLEVADYA 217 (221)
T ss_pred c-hhHHHHHHHHHHHcC--CeEEec-CC-eeEEecCCCCHHHHHHHHHHHhCCCCCcEEE-ECCCHH-H-HHHHHhCCce
Confidence 1 223455666665433 444443 44 8999999999999999999999999999999 777777 7 9999999999
Q ss_pred EEe
Q 002660 839 VIL 841 (895)
Q Consensus 839 VaM 841 (895)
||+
T Consensus 218 va~ 220 (221)
T TIGR02463 218 VVI 220 (221)
T ss_pred EEe
Confidence 997
No 109
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.86 E-value=1.6e-19 Score=203.96 Aligned_cols=268 Identities=12% Similarity=0.100 Sum_probs=183.0
Q ss_pred CCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeC
Q 002660 143 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 222 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~ 222 (895)
.+||+||++.+.........++.+++|++...++.... .. +..+.+|.+++.
T Consensus 103 ~kPDvVi~~~p~~~~~~l~~~~~~~iP~~~v~td~~~~----------------------~~------w~~~~~d~~~v~ 154 (391)
T PRK13608 103 EKPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYRLH----------------------KN------WITPYSTRYYVA 154 (391)
T ss_pred hCcCEEEECCcHHHHHHHHHhcCCCCCEEEEeCCCCcc----------------------cc------cccCCCCEEEEC
Confidence 78999999876443332333455689987665553110 01 135789999999
Q ss_pred ChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhH
Q 002660 223 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 302 (895)
Q Consensus 223 s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (895)
|+...+.+.+. +.+ .+++.+++++++.. |.... ....
T Consensus 155 s~~~~~~l~~~--gi~---------------------~~ki~v~GiPv~~~-f~~~~-------------------~~~~ 191 (391)
T PRK13608 155 TKETKQDFIDV--GID---------------------PSTVKVTGIPIDNK-FETPI-------------------DQKQ 191 (391)
T ss_pred CHHHHHHHHHc--CCC---------------------HHHEEEECeecChH-hcccc-------------------cHHH
Confidence 98776655332 122 23888888877643 32111 1112
Q ss_pred HhhhhcCCCCCcE-EEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCC
Q 002660 303 EIMRFFTNPRKPV-ILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY 381 (895)
Q Consensus 303 ~~~~~~~~~~~~~-il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~ 381 (895)
.+++++.++++++ +++.|++...||+..+++++... .+...+.+++|.++ ++.+++.. .++..
T Consensus 192 ~~~~~~l~~~~~~ilv~~G~lg~~k~~~~li~~~~~~---~~~~~~vvv~G~~~----------~l~~~l~~---~~~~~ 255 (391)
T PRK13608 192 WLIDNNLDPDKQTILMSAGAFGVSKGFDTMITDILAK---SANAQVVMICGKSK----------ELKRSLTA---KFKSN 255 (391)
T ss_pred HHHHcCCCCCCCEEEEECCCcccchhHHHHHHHHHhc---CCCceEEEEcCCCH----------HHHHHHHH---HhccC
Confidence 3345555566654 56789999899999999986322 23334433445432 11233332 23344
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcC-CCC----chhccccCCCeEEeCCC
Q 002660 382 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK-NGG----PVDIHRVLDNGLLVDPH 456 (895)
Q Consensus 382 ~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~-~gg----~~eiv~~~~~g~lv~p~ 456 (895)
++|.|.|+. ++++++|+.| |++|. .+.|+++.|||+||+|+|+++ .+| ...++.+.+.|+++ .
T Consensus 256 ~~v~~~G~~--~~~~~~~~~a----Dl~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~--~ 323 (391)
T PRK13608 256 ENVLILGYT--KHMNEWMASS----QLMIT----KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKIA--D 323 (391)
T ss_pred CCeEEEecc--chHHHHHHhh----hEEEe----CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEEe--C
Confidence 679999985 6899999999 99986 357899999999999999986 333 12233455556554 5
Q ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccCCC
Q 002660 457 DQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPRH 509 (895)
Q Consensus 457 d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~~~~~ 509 (895)
|+++++++|.+++++++.+++|++++++..+.|+++.+++.+++.+....+.+
T Consensus 324 ~~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~~~ 376 (391)
T PRK13608 324 TPEEAIKIVASLTNGNEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQPQ 376 (391)
T ss_pred CHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhhhh
Confidence 99999999999999999999999999998889999999999999998765543
No 110
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.86 E-value=1.9e-19 Score=203.04 Aligned_cols=265 Identities=12% Similarity=0.063 Sum_probs=187.1
Q ss_pred CCCcEEEecccc-chhHHHHHhc-----cCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhccc
Q 002660 143 VWPVAIHGHYAD-AGDSAALLSG-----ALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDAS 216 (895)
Q Consensus 143 ~~pDvVh~h~~~-~~~~~~~~~~-----~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~a 216 (895)
.+||+||++++. ....+..+++ ..++|++.++.|++... ..+..+.+
T Consensus 99 ~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~~---------------------------~~w~~~~~ 151 (382)
T PLN02605 99 YKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTCH---------------------------PTWFHKGV 151 (382)
T ss_pred cCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCcC---------------------------cccccCCC
Confidence 789999997643 2222222221 35799998888763111 01246789
Q ss_pred CEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 002660 217 EIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASP 296 (895)
Q Consensus 217 d~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~ 296 (895)
|.++++|+...+.+.+. |.+.+++.+++++++.+.+.+..
T Consensus 152 d~~~~~s~~~~~~l~~~-----------------------g~~~~ki~v~g~~v~~~f~~~~~----------------- 191 (382)
T PLN02605 152 TRCFCPSEEVAKRALKR-----------------------GLEPSQIRVYGLPIRPSFARAVR----------------- 191 (382)
T ss_pred CEEEECCHHHHHHHHHc-----------------------CCCHHHEEEECcccCHhhccCCC-----------------
Confidence 99999998766654332 22334899999999875443211
Q ss_pred CCchhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc----cCCCcEEEEEecCCCccccccchHHHHHHHH
Q 002660 297 DPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPL----RELANLTLIMGNRDGIDEMSSTSASVLLSVL 372 (895)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~----~~~~~l~livG~~~~~~~~~~~~~~~~~~l~ 372 (895)
.....+++++.++++++|+++|+....|++..+++++..+... .+...+.+++|.++. +..++.
T Consensus 192 --~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~----------~~~~L~ 259 (382)
T PLN02605 192 --PKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNKK----------LQSKLE 259 (382)
T ss_pred --CHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCHH----------HHHHHH
Confidence 1223456677778899999999999999999999999765310 122334356676521 122332
Q ss_pred HHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCC------CCchhcccc
Q 002660 373 KLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN------GGPVDIHRV 446 (895)
Q Consensus 373 ~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~------gg~~eiv~~ 446 (895)
+. ....+|.|.|++ ++++++|+.| |++|.++ .|+++.|||+||+|+|+++. |+...+ .+
T Consensus 260 ~~----~~~~~v~~~G~~--~~~~~l~~aa----Dv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i-~~ 324 (382)
T PLN02605 260 SR----DWKIPVKVRGFV--TNMEEWMGAC----DCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNVPYV-VD 324 (382)
T ss_pred hh----cccCCeEEEecc--ccHHHHHHhC----CEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhHHHH-Hh
Confidence 22 223568999996 5899999999 9999865 58899999999999999983 444434 44
Q ss_pred CCCeEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 002660 447 LDNGLLVDPHDQQSVADALLKLVAD-KQLWARCRQNGLKNIHLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 447 ~~~g~lv~p~d~~~la~ai~~ll~~-~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~ 503 (895)
.+.|+++ .|+++++++|.+++.+ ++.+++|++++++.....+++.+++.+.+...
T Consensus 325 ~g~g~~~--~~~~~la~~i~~ll~~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~~~ 380 (382)
T PLN02605 325 NGFGAFS--ESPKEIARIVAEWFGDKSDELEAMSENALKLARPEAVFDIVHDLHELVR 380 (382)
T ss_pred CCceeec--CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHhh
Confidence 5667654 6999999999999998 99999999999998888898988888776654
No 111
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.85 E-value=6.6e-21 Score=195.49 Aligned_cols=195 Identities=16% Similarity=0.220 Sum_probs=126.8
Q ss_pred EEEEEecCCCC----cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeecc
Q 002660 614 IFVISVDCDST----TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYST 689 (895)
Q Consensus 614 li~~DiDGTL~----~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~ 689 (895)
||++|+||||+ ..+++.++++|++|+++ |+.|+|+|||++..+.++++.++ +++||+||++|+..+
T Consensus 1 li~~D~DgTL~~~~~~~~~~~~~~~l~~l~~~----g~~~~i~TGR~~~~~~~~~~~~~------~~~i~~nGa~i~~~~ 70 (204)
T TIGR01484 1 LLFFDLDGTLLDPNAHELSPETIEALERLREA----GVKVVLVTGRSLAEIKELLKQLP------LPLIAENGALIFYPG 70 (204)
T ss_pred CEEEeCcCCCcCCCCCcCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHhCC------CCEEECCCcEEEECC
Confidence 58999999993 35779999999999998 59999999999999999998743 469999999999753
Q ss_pred CCCCCCCcc-cchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEEEeeCCC-CCccHHHH
Q 002660 690 LNSEDGPFV-VDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPG-MTPPVKEL 767 (895)
Q Consensus 690 ~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~l 767 (895)
.. .+. ....|...+.. . +.+...+..+..... ... .........+++.+.. .......+
T Consensus 71 ~~----~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~--------~~~----~e~~~~~~~~~~~~~~~~~~~~~~~ 131 (204)
T TIGR01484 71 EI----LYIEPSDVFEEILGI--K-EEIGAELKSLSEHYV--------GTF----IEDKAIAVAIHYVGAELGQELDSKM 131 (204)
T ss_pred EE----EEEcccccHHHHHHh--h-hhcCceeeeeccccc--------cce----eecccceeeEEEeccchhhHHHHHH
Confidence 11 000 00111111110 0 001111100000000 000 0122344455543321 11112344
Q ss_pred HHHHHhcc---CeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEe
Q 002660 768 RKVLRIQA---LRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 768 ~~~l~~~~---~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaM 841 (895)
...+.... ..+.+..+++. ++||+|++++|+.|++.++++++++++++++ +||+.| | ++||+.+|++|||
T Consensus 132 ~~~~~~~~~~~~~~~~~~s~~~-~~ev~p~~~~K~~~~~~~~~~~~~~~~~~~~-~GD~~n-D-~~~~~~~~~~vam 204 (204)
T TIGR01484 132 RERLEKIGRNDLELEAIYVGKT-DLEVLPAGVDKGSALQALLKELNGKRDEILA-FGDSGN-D-EEMFEVAGLAVAV 204 (204)
T ss_pred HHHHHhhccccCcEEEEEecCC-EEEEecCCCChHHHHHHHHHHhCCCHHHEEE-EcCCHH-H-HHHHHHcCCceEC
Confidence 44444322 34666656675 9999999999999999999999999999988 777777 7 9999999999998
No 112
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.84 E-value=1.3e-20 Score=187.77 Aligned_cols=164 Identities=30% Similarity=0.516 Sum_probs=142.0
Q ss_pred hhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCccccccchHHHHHHHHHHHHhcCCCCcE
Q 002660 306 RFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQV 384 (895)
Q Consensus 306 ~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~-livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v 384 (895)
......++++|+++||+.+.||++.+++|+..+.+. ..+++. +|+|.++ ....+...+..+++..++
T Consensus 8 ~~~~~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~-~~~~~~l~i~G~~~-----------~~~~~~~~~~~~~~~~~i 75 (172)
T PF00534_consen 8 KLKIPDKKKIILFIGRLDPEKGIDLLIEAFKKLKEK-KNPNYKLVIVGDGE-----------YKKELKNLIEKLNLKENI 75 (172)
T ss_dssp HTTT-TTSEEEEEESESSGGGTHHHHHHHHHHHHHH-HHTTEEEEEESHCC-----------HHHHHHHHHHHTTCGTTE
T ss_pred HcCCCCCCeEEEEEecCccccCHHHHHHHHHHHHhh-cCCCeEEEEEcccc-----------cccccccccccccccccc
Confidence 344457889999999999999999999999998642 134444 4778554 246677888889999999
Q ss_pred EeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHH
Q 002660 385 AYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADA 464 (895)
Q Consensus 385 ~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~a 464 (895)
.|++.++.+++..+|+.| |++|+||..|+||++++|||+||+|||+++.|+..|++.++.+|+++++.|+++++++
T Consensus 76 ~~~~~~~~~~l~~~~~~~----di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l~~~ 151 (172)
T PF00534_consen 76 IFLGYVPDDELDELYKSS----DIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPNDIEELADA 151 (172)
T ss_dssp EEEESHSHHHHHHHHHHT----SEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTSHHHHHHH
T ss_pred cccccccccccccccccc----eeccccccccccccccccccccccceeeccccCCceeeccccceEEeCCCCHHHHHHH
Confidence 999998888999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCHHHHHHHHHHHHHH
Q 002660 465 LLKLVADKQLWARCRQNGLKN 485 (895)
Q Consensus 465 i~~ll~~~~~~~~~~~~~~~~ 485 (895)
|.+++.+++.++.++++++++
T Consensus 152 i~~~l~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 152 IEKLLNDPELRQKLGKNARER 172 (172)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCHHHHHHHHHHhcCC
Confidence 999999999999999999874
No 113
>PLN02580 trehalose-phosphatase
Probab=99.82 E-value=3.5e-19 Score=193.06 Aligned_cols=211 Identities=12% Similarity=0.178 Sum_probs=130.4
Q ss_pred cccCeEEEEEecCCCC--------cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEc
Q 002660 609 RRRKHIFVISVDCDST--------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 680 (895)
Q Consensus 609 ~~~~kli~~DiDGTL~--------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 680 (895)
+.++.+||+|+||||. ..+++.++++|+.|.+. ..++|+|||+...+.+++...++ +++++
T Consensus 116 ~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~-----~~VAIVSGR~~~~L~~~l~~~~l------~laGs 184 (384)
T PLN02580 116 KGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY-----FPTAIISGRSRDKVYELVGLTEL------YYAGS 184 (384)
T ss_pred hcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC-----CCEEEEeCCCHHHHHHHhCCCCc------cEEEe
Confidence 5678899999999992 45688999999999987 36999999999999999876665 69999
Q ss_pred CCceEeeccCCCCCCCc-----ccc---hhhHH-HhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEE
Q 002660 681 SGSDLYYSTLNSEDGPF-----VVD---FYYHS-HIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCY 751 (895)
Q Consensus 681 nGa~I~~~~~~~~~~~~-----~~~---~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 751 (895)
||.++...........+ ..+ ..|.. .....|. ..+.++...+........ ..+.| ...+++
T Consensus 185 HG~e~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~-~~i~~v~~~l~e~~~~~p-----Gs~VE----~K~~sv 254 (384)
T PLN02580 185 HGMDIMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFL-PMIDEVFRSLVESTKDIK-----GAKVE----NHKFCV 254 (384)
T ss_pred CCceeecCCCCcccccccccccccccccccccccccchhhh-hhHHHHHHHHHHHhccCC-----CCEEE----ecCcEE
Confidence 99998754211000000 000 01100 0011122 112222222111110000 11111 236778
Q ss_pred EEEeeCCCCC--c-cHHHHHHHHHhccCeEEEEEecCCeeEEeec-CCCChHHHHHHHHHHhCCCccc-E-EEEecCCCC
Q 002660 752 AFSVQKPGMT--P-PVKELRKVLRIQALRCHVIYCQNGSRINVIP-VLASRSQALRYLYLRWGVELSK-M-VVFVGESGD 825 (895)
Q Consensus 752 ~~~~~~~~~~--~-~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p-~g~sKg~al~~L~~~~gi~~~~-v-iaf~Gd~nn 825 (895)
++|++..... . ..+++...+... ..+.+ .++.+++||.| .++|||.||++|++++|++.++ + .+|+||+.|
T Consensus 255 avHYR~a~~~~~~~~~~~l~~~l~~~-~~l~v--~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~T 331 (384)
T PLN02580 255 SVHYRNVDEKNWPLVAQCVHDVLKKY-PRLRL--THGRKVLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRT 331 (384)
T ss_pred EEEeCCCCchHHHHHHHHHHHHHHhC-CceEE--EeCCeEEEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCch
Confidence 8888654321 1 112223333221 22433 34445999999 5999999999999999998774 3 355777777
Q ss_pred CCccccccC-----cceEEEecCcc
Q 002660 826 TDYEGLLGG-----VHKTVILKGIC 845 (895)
Q Consensus 826 ~D~~eMl~~-----ag~gVaMgNa~ 845 (895)
| ++||+. +|+||+|||+.
T Consensus 332 -D-edmF~~L~~~~~G~~I~Vgn~~ 354 (384)
T PLN02580 332 -D-EDAFKVLREGNRGYGILVSSVP 354 (384)
T ss_pred -H-HHHHHhhhccCCceEEEEecCC
Confidence 8 999996 59999999987
No 114
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=99.81 E-value=1.1e-19 Score=187.76 Aligned_cols=200 Identities=13% Similarity=0.063 Sum_probs=122.3
Q ss_pred EEEEEecCCCC--cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeeccCC
Q 002660 614 IFVISVDCDST--TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTLN 691 (895)
Q Consensus 614 li~~DiDGTL~--~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~~~ 691 (895)
+||+|+||||. ...++.++++|++++++ |+.|++||||++..+..+++++++. +++||+||+.|++....
T Consensus 1 li~~DlDGTLl~~~~~~~~~~~ai~~l~~~----G~~~vi~TgR~~~~~~~~~~~lg~~----~~~I~~NGa~I~~~~~~ 72 (225)
T TIGR02461 1 VIFTDLDGTLLPPGYEPGPAREALEELKDL----GFPIVFVSSKTRAEQEYYREELGVE----PPFIVENGGAIFIPRGY 72 (225)
T ss_pred CEEEeCCCCCcCCCCCchHHHHHHHHHHHC----CCEEEEEeCCCHHHHHHHHHHcCCC----CcEEEcCCcEEEecCcc
Confidence 58999999993 45666799999999998 5999999999999999999999983 57999999999985421
Q ss_pred CC---------CCCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCC------------cccccccccCCceE
Q 002660 692 SE---------DGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGE------------KVLTPAEQLSTNYC 750 (895)
Q Consensus 692 ~~---------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~k 750 (895)
.. ..... +...+..+.++.++........ ....... .............|
T Consensus 73 ~~~~~~~~~~~~~~~i--------~~~~l~~~~~~~il~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 143 (225)
T TIGR02461 73 FPFPVGAGREVGNYEV--------IELGKPVAKIRAALKEAENEYG-LKYYGNSTAEEVEKLTGLPRELAPLAKRREYSE 143 (225)
T ss_pred ccccccccccCCCeEE--------EEcCCCHHHHHHHHHHHHHhcC-ccchhcCCHHHHHHHHCcCHHHHHHHHhhhcCC
Confidence 00 00000 1111222222322221111000 0000000 00000000011222
Q ss_pred EEEEeeCCCCCccHHHHHHHHHhccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCC--CcccEEEEecCCCCCCc
Q 002660 751 YAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGV--ELSKMVVFVGESGDTDY 828 (895)
Q Consensus 751 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi--~~~~viaf~Gd~nn~D~ 828 (895)
+.+.. ++ ..+.++.+.+.. ..+.++.+. .++++ +.++|||.|++.|++++++ +.+++++ +||+.| |
T Consensus 144 i~~~~-~~---e~~~~~~~~~~~--~~~~~~~s~--~~~~i-~~~~sK~~al~~l~~~~~~~~~~~~~i~-~GD~~n-D- 211 (225)
T TIGR02461 144 TIFLW-SR---EGWEAILVTARA--RGLKYTHGG--RFYTV-HGGSDKGKAIKRLLDLYKLRPGAIESVG-LGDSEN-D- 211 (225)
T ss_pred cccCC-CH---HHHHHHHHHHHH--cCCcEEECC--EEEEE-CCCCCHHHHHHHHHHHhccccCcccEEE-EcCCHH-H-
Confidence 22221 11 234455555532 234444443 35676 5599999999999999987 6668999 777777 7
Q ss_pred cccccCcceEEEec
Q 002660 829 EGLLGGVHKTVILK 842 (895)
Q Consensus 829 ~eMl~~ag~gVaMg 842 (895)
++||+.+|+||++|
T Consensus 212 ~~ml~~ag~~v~v~ 225 (225)
T TIGR02461 212 FPMFEVVDLAFLVG 225 (225)
T ss_pred HHHHHhCCCcEecC
Confidence 99999999999986
No 115
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.80 E-value=3.2e-17 Score=167.31 Aligned_cols=390 Identities=18% Similarity=0.265 Sum_probs=256.7
Q ss_pred CCCchhHHHHHHHHHHhcC-CCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCcc
Q 002660 27 DTGGQVKYVVELARALGSM-PGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKY 105 (895)
Q Consensus 27 ~~GG~~~~v~~La~~L~~~-G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~~ 105 (895)
-.||-|+++..-.+.+.+. ++ +...|+|..++- .+.+.+.... ...+....++++.++.+.. ++
T Consensus 55 AGGGGErVLW~Avr~~q~k~~n-~~~viYsGD~n~--------t~~~IL~k~k--~~F~idlDs~nI~Fi~Lk~----R~ 119 (465)
T KOG1387|consen 55 AGGGGERVLWKAVRITQRKFPN-NVIVIYSGDFNV--------TPENILNKVK--NKFDIDLDSDNIFFIYLKL----RY 119 (465)
T ss_pred CCCCcceehhHHHHHHHHhCCC-ceEEEEeCCCCC--------CHHHHHHHHH--HhcCceecccceEEEEEEe----ee
Confidence 3578899998888887764 32 455556554321 1222221100 0011222345777777654 34
Q ss_pred cccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEecc--ccchhHHHHHhccCCCCEEEEeCCCch--hh
Q 002660 106 IAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHY--ADAGDSAALLSGALNVPMLFTGHSLGR--DK 181 (895)
Q Consensus 106 ~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~--~~~~~~~~~~~~~~~ip~v~t~H~~~~--~~ 181 (895)
+-....|++..- +.+.+....-...++-+ ..|||..-.. +++-.+ ++...++|++...|-... +.
T Consensus 120 lVea~~~~hfTl-lgQaigsmIl~~Eai~r-------~~Pdi~IDtMGY~fs~p~---~r~l~~~~V~aYvHYP~iS~DM 188 (465)
T KOG1387|consen 120 LVEASTWKHFTL-LGQAIGSMILAFEAIIR-------FPPDIFIDTMGYPFSYPI---FRRLRRIPVVAYVHYPTISTDM 188 (465)
T ss_pred eeecccccceeh-HHHHHHHHHHHHHHHHh-------CCchheEecCCCcchhHH---HHHHccCceEEEEecccccHHH
Confidence 444456666532 22222111111112222 6799877543 332222 233458999999995432 11
Q ss_pred HHHHHH---HhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCC
Q 002660 182 LEQLLK---QARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGK 258 (895)
Q Consensus 182 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~ 258 (895)
...+.. .+.+.+.. -..|+++..+ -..+-..||.|.+.|.+........+..+
T Consensus 189 L~~l~qrq~s~~l~~~K-laY~rlFa~l--Y~~~G~~ad~vm~NssWT~nHI~qiW~~~--------------------- 244 (465)
T KOG1387|consen 189 LKKLFQRQKSGILVWGK-LAYWRLFALL--YQSAGSKADIVMTNSSWTNNHIKQIWQSN--------------------- 244 (465)
T ss_pred HHHHHhhhhcchhhhHH-HHHHHHHHHH--HHhccccceEEEecchhhHHHHHHHhhcc---------------------
Confidence 222221 11111111 1234444444 34566799999999887776666665432
Q ss_pred CCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhc
Q 002660 259 FMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGEC 338 (895)
Q Consensus 259 ~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l 338 (895)
++.+++|+-+.+........ ...+.+.++++|.+.|+|+.. +|+.++..
T Consensus 245 ---~~~iVyPPC~~e~lks~~~t---------------------------e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~ 293 (465)
T KOG1387|consen 245 ---TCSIVYPPCSTEDLKSKFGT---------------------------EGERENQLLSLAQFRPEKNHK-ILQLFALY 293 (465)
T ss_pred ---ceeEEcCCCCHHHHHHHhcc---------------------------cCCcceEEEEEeecCcccccH-HHHHHHHH
Confidence 67788877777643321100 124568899999999999999 55555544
Q ss_pred ccccCC----CcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecC
Q 002660 339 RPLREL----ANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPA 413 (895)
Q Consensus 339 ~~~~~~----~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps 413 (895)
..+.+. +++.| ++|+....+ .++.+..+..++..+++..+|.|...+|.+++..+|..| .+.|++-
T Consensus 294 ~~~~pl~a~~~~iKL~ivGScRnee-----D~ervk~Lkd~a~~L~i~~~v~F~~N~Py~~lv~lL~~a----~iGvh~M 364 (465)
T KOG1387|consen 294 LKNEPLEASVSPIKLIIVGSCRNEE-----DEERVKSLKDLAEELKIPKHVQFEKNVPYEKLVELLGKA----TIGVHTM 364 (465)
T ss_pred HhcCchhhccCCceEEEEeccCChh-----hHHHHHHHHHHHHhcCCccceEEEecCCHHHHHHHhccc----eeehhhh
Confidence 433444 34554 677765533 467789999999999999999999999999999999999 8999999
Q ss_pred CCCCCchHHHHHHHcCCCEEEcCCCCch-hccccC---CCeEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHhhc
Q 002660 414 FIEPFGLTLIEAAAHGLPIVATKNGGPV-DIHRVL---DNGLLVDPHDQQSVADALLKLVA-DKQLWARCRQNGLKNIHL 488 (895)
Q Consensus 414 ~~Eg~gl~~~Ea~a~G~PVvas~~gg~~-eiv~~~---~~g~lv~p~d~~~la~ai~~ll~-~~~~~~~~~~~~~~~~~~ 488 (895)
+.|-||+.+.||||+|+-+|+.+.||+. ||+.+. .+|++.. +.++.|++|.+++. +++++..+++++|..+.+
T Consensus 365 wNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~--t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~R 442 (465)
T KOG1387|consen 365 WNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAP--TDEEYAEAILKIVKLNYDERNMMRRNARKSLAR 442 (465)
T ss_pred hhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeecC--ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988864 666542 3688874 77899999999998 777788999999999999
Q ss_pred CCHHHHHHHHHHHHHcccCC
Q 002660 489 FSWPEHCKTYLSRIAGCKPR 508 (895)
Q Consensus 489 ~s~~~~a~~~~~~~~~~~~~ 508 (895)
|+=....+.|...+..+++.
T Consensus 443 FsE~~F~kd~~~~i~kll~e 462 (465)
T KOG1387|consen 443 FGELKFDKDWENPICKLLEE 462 (465)
T ss_pred hhHHHHHHhHhHHHHHhhcc
Confidence 99999999999998888764
No 116
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=99.80 E-value=1.5e-18 Score=182.44 Aligned_cols=221 Identities=10% Similarity=0.022 Sum_probs=134.8
Q ss_pred cCeEEEEEecCCCC--------cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCC
Q 002660 611 RKHIFVISVDCDST--------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSG 682 (895)
Q Consensus 611 ~~kli~~DiDGTL~--------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nG 682 (895)
++++||||+||||. ..+++.++++|++|.+. +++.|+|+|||++..+...+ .++ .-+++++||
T Consensus 2 ~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~---~~~~v~ivSGR~~~~~~~~~---~~~---~~~l~g~hG 72 (244)
T TIGR00685 2 RKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAAR---PHNAIWIISGRKFLEKWLGV---KLP---GLGLAGEHG 72 (244)
T ss_pred CcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhC---CCCeEEEEECCChhhccccC---CCC---ceeEEeecC
Confidence 57899999999992 23568899999999987 47889999999887765433 221 125999999
Q ss_pred ceEeeccCCCCCCCcccchhhHHHhhcccCcchHHHHHH---hhhhhccccccccCCcccccccccCCceEEEEEeeCC-
Q 002660 683 SDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLV---RWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKP- 758 (895)
Q Consensus 683 a~I~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~- 758 (895)
++++..+... .+. .... ....|. +...++.+ ..++...+. ..+.++++++..
T Consensus 73 ~~~~~~g~~~---~~~---~~~~-~~~~~~-~~~~~l~~~~~~~pG~~iE~----------------K~~s~~~hyr~a~ 128 (244)
T TIGR00685 73 CEMKDNGSCQ---DWV---NLTE-KIPSWK-VRANELREEITTRPGVFIER----------------KGVALAWHYRQAP 128 (244)
T ss_pred EEEecCCCcc---eee---echh-hhhhHH-HHHHHHHHHHhcCCCcEEEe----------------cceEEEEEeccCC
Confidence 9988633110 000 0000 001222 22222222 222322222 245677777544
Q ss_pred CCCccHHHHHHHHHhccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCc---
Q 002660 759 GMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGV--- 835 (895)
Q Consensus 759 ~~~~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~a--- 835 (895)
+......++.+.+........+....+..++|+.|.++|||.|++.++++++++.+++++ +||+.| | ++||+.+
T Consensus 129 d~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~-iGD~~~-D-~~~~~~~~~~ 205 (244)
T TIGR00685 129 VPELARFRAKELKEKILSFTDLEVMDGKAVVELKPRFVNKGEIVKRLLWHQPGSGISPVY-LGDDIT-D-EDAFRVVNNQ 205 (244)
T ss_pred CcHHHHHHHHHHHHHHhcCCCEEEEECCeEEEEeeCCCCHHHHHHHHHHhcccCCCceEE-EcCCCc-H-HHHHHHHhcc
Confidence 211111122222222111112233334458999999999999999999999999888877 777777 7 9999988
Q ss_pred -----ceEEEecCccccccccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHHHh
Q 002660 836 -----HKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQL 890 (895)
Q Consensus 836 -----g~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~ 890 (895)
+.+|+|+.+. . +..+.|+.+++ +.+...|+.+
T Consensus 206 ~~~~g~~~v~v~~g~----~-----------------~~~A~~~~~~~--~~v~~~L~~l 242 (244)
T TIGR00685 206 WGNYGFYPVPIGSGS----K-----------------KTVAKFHLTGP--QQVLEFLGLL 242 (244)
T ss_pred cCCCCeEEEEEecCC----c-----------------CCCceEeCCCH--HHHHHHHHHH
Confidence 6899996222 1 23455676755 4477777654
No 117
>PLN02423 phosphomannomutase
Probab=99.79 E-value=1.6e-18 Score=181.56 Aligned_cols=208 Identities=13% Similarity=0.105 Sum_probs=116.6
Q ss_pred ccCeEEEEEecCCC---CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhC-CCCCCCCCEEEEcCCceE
Q 002660 610 RRKHIFVISVDCDS---TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSG-HLSPSDFDAFICNSGSDL 685 (895)
Q Consensus 610 ~~~kli~~DiDGTL---~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l-~l~~~~~d~~I~~nGa~I 685 (895)
..+.++++|||||| .+.+++.+++++++|+++ +.|++||||++..+.+.+... .. .++++||+||+.|
T Consensus 5 ~~~~i~~~D~DGTLl~~~~~i~~~~~~ai~~l~~~-----i~fviaTGR~~~~~~~~~~~~~~~---~~~~~I~~NGa~i 76 (245)
T PLN02423 5 KPGVIALFDVDGTLTAPRKEATPEMLEFMKELRKV-----VTVGVVGGSDLSKISEQLGKTVIN---DYDYVFSENGLVA 76 (245)
T ss_pred ccceEEEEeccCCCcCCCCcCCHHHHHHHHHHHhC-----CEEEEECCcCHHHHHHHhcccccc---cCCEEEECCceEE
Confidence 34567779999999 356889999999999853 999999999999888777654 22 1247999999999
Q ss_pred eeccCCCCCCCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEEEee------CCC
Q 002660 686 YYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQ------KPG 759 (895)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~------~~~ 759 (895)
+..+. .... ..+......+.+.+++..................+.+........+...... +..
T Consensus 77 ~~~g~------~i~~----~~l~~~l~~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~ 146 (245)
T PLN02423 77 HKDGK------LIGT----QSLKSFLGEDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFE 146 (245)
T ss_pred EeCCE------EEEE----ecccccCCHHHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHH
Confidence 85431 1100 0011111112222222211100000000000000000000000000000000 000
Q ss_pred ----CCccHHHHHHHHHhccCeEEEEEecCC-eeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecC----CCCCCccc
Q 002660 760 ----MTPPVKELRKVLRIQALRCHVIYCQNG-SRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGE----SGDTDYEG 830 (895)
Q Consensus 760 ----~~~~~~~l~~~l~~~~~~~~~~~s~~~-~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd----~nn~D~~e 830 (895)
......++.+.+......+.++.+.++ .++||+|+|+|||.||+.|+ +++++|| ||| +.| | +|
T Consensus 147 ~i~~i~~~~~~~~~~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~-----~~~e~~a-FGD~~~~~~N-D-~e 218 (245)
T PLN02423 147 KYDKVHNIRPKMVSVLREKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE-----DFDEIHF-FGDKTYEGGN-D-HE 218 (245)
T ss_pred hhCccchHHHHHHHHHHHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc-----CcCeEEE-EeccCCCCCC-c-HH
Confidence 011223444555443344566666552 49999999999999999999 8999999 555 566 6 99
Q ss_pred cccC-cceEEEecC
Q 002660 831 LLGG-VHKTVILKG 843 (895)
Q Consensus 831 Ml~~-ag~gVaMgN 843 (895)
||+. .-.++++.+
T Consensus 219 Ml~~~~~~~~~~~~ 232 (245)
T PLN02423 219 IFESERTIGHTVTS 232 (245)
T ss_pred HHhCCCcceEEeCC
Confidence 9997 556777754
No 118
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.77 E-value=8e-16 Score=169.83 Aligned_cols=289 Identities=26% Similarity=0.323 Sum_probs=206.4
Q ss_pred CcEEEeccccchh---HHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEe
Q 002660 145 PVAIHGHYADAGD---SAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 221 (895)
Q Consensus 145 pDvVh~h~~~~~~---~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~ 221 (895)
+|++|.+...... .........+.+.+...|............. .... .. .. ..... ........+.+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~-~~-~~~~~--~~~~~~~~~~~~~ 156 (381)
T COG0438 84 YDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLL--LLLG-LL-RL-LLKRL--KKALRLLADRVIA 156 (381)
T ss_pred cceeeccccccccchhHHHhhccccCCcEEEeecCCcccccccccch--hhHH-HH-HH-HHHHH--HHhccccccEEEE
Confidence 5999988763333 3455666678899999998765321110000 0000 00 00 00000 1111225788888
Q ss_pred CChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchh
Q 002660 222 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 301 (895)
Q Consensus 222 ~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (895)
.+............. .++.++|++++.+.+.+....
T Consensus 157 ~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~-------------------- 192 (381)
T COG0438 157 VSPALKELLEALGVP------------------------NKIVVIPNGIDTEKFAPARIG-------------------- 192 (381)
T ss_pred CCHHHHHHHHHhCCC------------------------CCceEecCCcCHHHcCccccC--------------------
Confidence 887553322111110 168899999999988652100
Q ss_pred HHhhhhcCCCC--CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCccccccchHHHHHHHHHHHHhc
Q 002660 302 SEIMRFFTNPR--KPVILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKY 378 (895)
Q Consensus 302 ~~~~~~~~~~~--~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~-livG~~~~~~~~~~~~~~~~~~l~~~~~~~ 378 (895)
..++ ...++++||+.+.||++.+++++..+....+. +. +++|.++.. ...+...+..+
T Consensus 193 -------~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~--~~~~~~g~~~~~----------~~~~~~~~~~~ 253 (381)
T COG0438 193 -------LLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD--IKLVIVGDGPER----------REELEKLAKKL 253 (381)
T ss_pred -------CCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC--eEEEEEcCCCcc----------HHHHHHHHHHh
Confidence 1122 37999999999999999999999999642222 33 477877642 13344577777
Q ss_pred CCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCH
Q 002660 379 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQ 458 (895)
Q Consensus 379 ~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~ 458 (895)
+..+++.|+|.++.+++..+|+.| |++++|+..|+||++++|||++|+|||+++.++..+++.++.+|+++.+.+.
T Consensus 254 ~~~~~v~~~g~~~~~~~~~~~~~~----~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~ 329 (381)
T COG0438 254 GLEDNVKFLGYVPDEELAELLASA----DVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGDV 329 (381)
T ss_pred CCCCcEEEecccCHHHHHHHHHhC----CEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEecCCCCH
Confidence 777889999999878899999999 9999999889999999999999999999999999999988767888877789
Q ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHHcccC
Q 002660 459 QSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAGCKP 507 (895)
Q Consensus 459 ~~la~ai~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~~~~~ 507 (895)
+++++++..++++++.++.+...+++.+ +.|+|+..+..+.+.+.....
T Consensus 330 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (381)
T COG0438 330 EELADALEQLLEDPELREELGEAARERVEEEFSWERIAEQLLELYEELLA 379 (381)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 9999999999999888888887677777 699999999999999887643
No 119
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.77 E-value=4.8e-17 Score=168.99 Aligned_cols=119 Identities=31% Similarity=0.449 Sum_probs=96.5
Q ss_pred EEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCC-CH
Q 002660 318 ALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQS-DV 395 (895)
Q Consensus 318 ~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~-el 395 (895)
++|++.+.||++.+++|+..+.+.. +++.+ ++|.+... ......+...+...+|.+.+.++.+ ++
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~--~~~~~~i~G~~~~~-----------~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 175 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERG--PDLKLVIAGDGPER-----------EYLEELLAALLLLDRVIFLGGLDPEELL 175 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhC--CCeEEEEEeCCCCh-----------HHHHHHHHhcCCcccEEEeCCCCcHHHH
Confidence 9999999999999999999996433 45554 77876542 2222335667778899999998554 45
Q ss_pred HHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEe
Q 002660 396 PEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLV 453 (895)
Q Consensus 396 ~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv 453 (895)
..+++.| |++++|+..|++|++++|||+||+|+|+|+.++..|++.++.+|+++
T Consensus 176 ~~~~~~~----di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 176 ALLLAAA----DVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred HHHhhcC----CEEEecccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 5555558 99999999999999999999999999999999999999888899875
No 120
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.76 E-value=3.1e-17 Score=169.28 Aligned_cols=250 Identities=18% Similarity=0.129 Sum_probs=147.1
Q ss_pred CeEEEEEecCCCC---cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeec
Q 002660 612 KHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 688 (895)
Q Consensus 612 ~kli~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~ 688 (895)
+|+||+||||||. ....+.++++|++|+++ |+.|++||||++.++..+++++++. +++||+||+.|+..
T Consensus 1 ~KLIftDLDGTLLd~~~~~~~~a~~aL~~Lk~~----GI~vVlaTGRt~~ev~~l~~~Lgl~----~p~I~eNGA~I~~p 72 (302)
T PRK12702 1 MRLVLSSLDGSLLDLEFNSYGAARQALAALERR----SIPLVLYSLRTRAQLEHLCRQLRLE----HPFICEDGSAIYVP 72 (302)
T ss_pred CcEEEEeCCCCCcCCCCcCCHHHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHhCCC----CeEEEeCCcEEEEc
Confidence 4799999999993 45778899999999998 5999999999999999999999984 58999999999977
Q ss_pred cCCCCC-C---C-cccchhhHHHhhcccCcchHHHHHHhhhhhcccc-ccccC--Cccc------ccc---cccCCceEE
Q 002660 689 TLNSED-G---P-FVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDK-KAESG--EKVL------TPA---EQLSTNYCY 751 (895)
Q Consensus 689 ~~~~~~-~---~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~------~~~---~~~~~~~k~ 751 (895)
...... . . ...+..|. +........++..+..+....... ..... ...+ ... ...+..|..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~--~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~~Re~SE 150 (302)
T PRK12702 73 EHYFPAGILDEQWQHRPPYYV--CALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQKREYSE 150 (302)
T ss_pred cccccccccccccccCCCceE--EecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCc
Confidence 432100 0 0 01111110 111111233444443332211000 00000 0000 000 001233333
Q ss_pred EEEeeCCCCCccHHHHHHHHHhccCeEEEEEecCCeeEEeec------------------C---CCChHHHHHHHHHHhC
Q 002660 752 AFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIP------------------V---LASRSQALRYLYLRWG 810 (895)
Q Consensus 752 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p------------------~---g~sKg~al~~L~~~~g 810 (895)
.+...+.+ +.+.+.+.+.+.++ + .+++++-++. . +++||.|++.|.+.|.
T Consensus 151 p~~w~~~~-----~~~~~~~~~~g~~~--~--~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~ 221 (302)
T PRK12702 151 IFSYSGDP-----ARLREAFAQQEANL--T--QHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQ 221 (302)
T ss_pred ceEecCCH-----HHHHHHHHHcCCeE--E--ecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHH
Confidence 33332111 12366666654332 2 3334777775 5 9999999999999987
Q ss_pred CCcc--cEEEEecCCCCCCccccccCcceEEEecCccccccccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHH
Q 002660 811 VELS--KMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLE 888 (895)
Q Consensus 811 i~~~--~viaf~Gd~nn~D~~eMl~~ag~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~ 888 (895)
-... .+++ .||+.| | ++||+++.++|++.+-.....-|+ |- .+ +-+...+... .|......|=.+++.
T Consensus 222 ~~~~~~~tia-LGDspN-D-~~mLe~~D~~vvi~~~~~~~~~~~-~~---~l--~~~~~~~~~~-~a~~~GP~GW~e~v~ 291 (302)
T PRK12702 222 RHLGPIKALG-IGCSPP-D-LAFLRWSEQKVVLPSPIADSLWKE-AL---RL--GGPEVQPQWQ-LAQLPGPEGWNEVVL 291 (302)
T ss_pred hccCCceEEE-ecCChh-h-HHHHHhCCeeEEecCCCCCCcccc-cc---cc--cCcccCccce-ecCCCCcHHHHHHHH
Confidence 6522 5777 899999 9 999999999999977662221000 00 00 0011122333 667778888888876
Q ss_pred Hh
Q 002660 889 QL 890 (895)
Q Consensus 889 ~~ 890 (895)
++
T Consensus 292 ~~ 293 (302)
T PRK12702 292 MW 293 (302)
T ss_pred HH
Confidence 65
No 121
>PLN03017 trehalose-phosphatase
Probab=99.76 E-value=4.9e-17 Score=174.69 Aligned_cols=204 Identities=12% Similarity=0.136 Sum_probs=127.3
Q ss_pred cccCeEEEEEecCCCC---c-----chhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEc
Q 002660 609 RRRKHIFVISVDCDST---T-----GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 680 (895)
Q Consensus 609 ~~~~kli~~DiDGTL~---~-----~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 680 (895)
..++.+||+|+||||. . .+++.++++|++|+ + ++.|+|+|||++..+.+++.-.+ -++|++
T Consensus 108 ~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~----~~~vaIvSGR~~~~l~~~~~l~~------l~l~g~ 176 (366)
T PLN03017 108 RGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA-K----CFPTAIVTGRCIDKVYNFVKLAE------LYYAGS 176 (366)
T ss_pred cCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh-c----CCcEEEEeCCCHHHHHHhhcccC------ceEEEc
Confidence 3567899999999994 2 57889999999999 4 47899999999999998853322 379999
Q ss_pred CCceEeeccCCCCC-------CCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEE
Q 002660 681 SGSDLYYSTLNSED-------GPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAF 753 (895)
Q Consensus 681 nGa~I~~~~~~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 753 (895)
||++|......... ........|...+..- ...+.......++...+. ..+.+++
T Consensus 177 hGa~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~v--~~~L~~~~~~~pGa~VE~----------------K~~~vav 238 (366)
T PLN03017 177 HGMDIKGPAKGFSRHKRVKQSLLYQPANDYLPMIDEV--YRQLLEKTKSTPGAKVEN----------------HKFCASV 238 (366)
T ss_pred CCcEEecCCCcceeccccccccccccchhhHHHHHHH--HHHHHHHHhcCCCCEEEe----------------cCcEEEE
Confidence 99999865321000 0000011121111100 011112222233333333 2677888
Q ss_pred EeeCCCCCccHHHHHHHHHhccCeE-EEEEecCCeeEEeecC-CCChHHHHHHHHHHhCCCc--ccEEEEecCCCCCCcc
Q 002660 754 SVQKPGMTPPVKELRKVLRIQALRC-HVIYCQNGSRINVIPV-LASRSQALRYLYLRWGVEL--SKMVVFVGESGDTDYE 829 (895)
Q Consensus 754 ~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~s~~~~~lEI~p~-g~sKg~al~~L~~~~gi~~--~~viaf~Gd~nn~D~~ 829 (895)
|++..+. ....++...+.....+. .+...++.+.+||.|. +++||.|+++|++.++... ..+.+|+||+-+ | +
T Consensus 239 HyR~ad~-~~~~~l~~~~~~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~T-D-E 315 (366)
T PLN03017 239 HFRCVDE-KKWSELVLQVRSVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRT-D-E 315 (366)
T ss_pred EcCcCCH-HHHHHHHHHHHHHHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCc-c-H
Confidence 8865432 12233333333211111 1334456669999995 9999999999999998764 346677888886 8 9
Q ss_pred ccccCc-----ceEEEecCc
Q 002660 830 GLLGGV-----HKTVILKGI 844 (895)
Q Consensus 830 eMl~~a-----g~gVaMgNa 844 (895)
+||+.+ |+||.+|..
T Consensus 316 DaF~~L~~~~~G~gI~VG~~ 335 (366)
T PLN03017 316 DAFKMLRDRGEGFGILVSKF 335 (366)
T ss_pred HHHHHHhhcCCceEEEECCC
Confidence 999976 578888853
No 122
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=99.73 E-value=6.8e-16 Score=170.63 Aligned_cols=246 Identities=12% Similarity=0.062 Sum_probs=164.5
Q ss_pred CCC-cEEEeccccc-h--hHHHH--HhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhccc
Q 002660 143 VWP-VAIHGHYADA-G--DSAAL--LSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDAS 216 (895)
Q Consensus 143 ~~p-DvVh~h~~~~-~--~~~~~--~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~a 216 (895)
.+| |+||.+++.. + +.... ..++.++|+|+++|+.++..... .+ ..+ ..|+..++.|
T Consensus 62 ~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~---~~------------~~~--~~~~~~~~~a 124 (333)
T PRK09814 62 LKPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDS---NY------------YLM--KEEIDMLNLA 124 (333)
T ss_pred CCCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhccc---cc------------hhh--HHHHHHHHhC
Confidence 456 9999998732 2 11222 22344899999999987643110 00 011 2266779999
Q ss_pred CEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 002660 217 EIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASP 296 (895)
Q Consensus 217 d~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~ 296 (895)
|.|+++|+...+.+... |.+..++.++++..+.....+..
T Consensus 125 D~iI~~S~~~~~~l~~~-----------------------g~~~~~i~~~~~~~~~~~~~~~~----------------- 164 (333)
T PRK09814 125 DVLIVHSKKMKDRLVEE-----------------------GLTTDKIIVQGIFDYLNDIELVK----------------- 164 (333)
T ss_pred CEEEECCHHHHHHHHHc-----------------------CCCcCceEecccccccccccccc-----------------
Confidence 99999999887776432 22223677776554332111100
Q ss_pred CCchhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHH
Q 002660 297 DPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLID 376 (895)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~ 376 (895)
....++.|+|+|++...+++ .. . .+...+ +++|+++..+
T Consensus 165 ------------~~~~~~~i~yaG~l~k~~~l----~~---~---~~~~~l-~i~G~g~~~~------------------ 203 (333)
T PRK09814 165 ------------TPSFQKKINFAGNLEKSPFL----KN---W---SQGIKL-TVFGPNPEDL------------------ 203 (333)
T ss_pred ------------cccCCceEEEecChhhchHH----Hh---c---CCCCeE-EEECCCcccc------------------
Confidence 01345689999999843321 11 1 222233 4789886421
Q ss_pred hcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecC-C----------CCCCchHHHHHHHcCCCEEEcCCCCchhccc
Q 002660 377 KYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPA-F----------IEPFGLTLIEAAAHGLPIVATKNGGPVDIHR 445 (895)
Q Consensus 377 ~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps-~----------~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~ 445 (895)
...++|.|.|+++.++++.+|+.. +.+++. . .-.+|.++.||||||+|||+++.++..++|.
T Consensus 204 --~~~~~V~f~G~~~~eel~~~l~~~-----~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~ 276 (333)
T PRK09814 204 --ENSANISYKGWFDPEELPNELSKG-----FGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIV 276 (333)
T ss_pred --ccCCCeEEecCCCHHHHHHHHhcC-----cCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHH
Confidence 245689999999999999999874 333332 1 2357888999999999999999999999999
Q ss_pred cCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHH
Q 002660 446 VLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKT 497 (895)
Q Consensus 446 ~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~ 497 (895)
++.+|++++ +.++++++|.++ +++++++|++++++..+++.-....++
T Consensus 277 ~~~~G~~v~--~~~el~~~l~~~--~~~~~~~m~~n~~~~~~~~~~g~~~~~ 324 (333)
T PRK09814 277 ENGLGFVVD--SLEELPEIIDNI--TEEEYQEMVENVKKISKLLRNGYFTKK 324 (333)
T ss_pred hCCceEEeC--CHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHhcchhHHH
Confidence 999999997 778999999885 457788999999988865554444444
No 123
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.73 E-value=2.5e-16 Score=178.05 Aligned_cols=249 Identities=14% Similarity=0.028 Sum_probs=154.8
Q ss_pred CCCcEEEecccc-chhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEe
Q 002660 143 VWPVAIHGHYAD-AGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 221 (895)
Q Consensus 143 ~~pDvVh~h~~~-~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~ 221 (895)
++||+||++... ........++..++|++++.|...... . ....+ ...+.+|.+++
T Consensus 84 ~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~~~~~----------~-------~~~~~------~~~~~~d~i~~ 140 (380)
T PRK00025 84 EPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPSVWAW----------R-------QGRAF------KIAKATDHVLA 140 (380)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCchhhc----------C-------chHHH------HHHHHHhhhee
Confidence 789999998642 222223345567999998766431100 0 00111 13567899999
Q ss_pred CChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchh
Q 002660 222 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 301 (895)
Q Consensus 222 ~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (895)
+++...+.+.. + |. ++.+++|++....... ....
T Consensus 141 ~~~~~~~~~~~-~----------------------g~---~~~~~G~p~~~~~~~~--------------------~~~~ 174 (380)
T PRK00025 141 LFPFEAAFYDK-L----------------------GV---PVTFVGHPLADAIPLL--------------------PDRA 174 (380)
T ss_pred CCccCHHHHHh-c----------------------CC---CeEEECcCHHHhcccc--------------------cChH
Confidence 98765544321 1 11 4556665553221110 0011
Q ss_pred HHhhhhcCCCCCcEEE-EEe-CCCCC-CCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHh
Q 002660 302 SEIMRFFTNPRKPVIL-ALA-RPDPK-KNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDK 377 (895)
Q Consensus 302 ~~~~~~~~~~~~~~il-~vg-rl~~~-Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~ 377 (895)
..+.+++.++++++++ +.| |.... ++++.+++|++.+.+.. +++.+ ++|+.+. ...++.+.+.+
T Consensus 175 ~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~--~~~~~ii~~~~~~----------~~~~~~~~~~~ 242 (380)
T PRK00025 175 AARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRY--PDLRFVLPLVNPK----------RREQIEEALAE 242 (380)
T ss_pred HHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEecCChh----------hHHHHHHHHhh
Confidence 2334455556666644 444 44443 45789999999885433 34444 4444221 12344555555
Q ss_pred c-CCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEc-----------------CCCC
Q 002660 378 Y-DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVAT-----------------KNGG 439 (895)
Q Consensus 378 ~-~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas-----------------~~gg 439 (895)
+ ++. +.+. ..++..+|+.| |++|.+| |.+.+|||+||+|+|+. ..++
T Consensus 243 ~~~~~--v~~~----~~~~~~~~~~a----Dl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~ 307 (380)
T PRK00025 243 YAGLE--VTLL----DGQKREAMAAA----DAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVS 307 (380)
T ss_pred cCCCC--eEEE----cccHHHHHHhC----CEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeee
Confidence 5 443 4442 35899999999 9999987 78888999999999987 4566
Q ss_pred chhccccCC--CeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhh
Q 002660 440 PVDIHRVLD--NGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIH 487 (895)
Q Consensus 440 ~~eiv~~~~--~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~ 487 (895)
..+++.++. .+++.+..|+++++++|.++++|++.++++++++.+..+
T Consensus 308 l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~ 357 (380)
T PRK00025 308 LPNLLAGRELVPELLQEEATPEKLARALLPLLADGARRQALLEGFTELHQ 357 (380)
T ss_pred hHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 677776543 456777889999999999999999999999988755553
No 124
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.73 E-value=1.2e-16 Score=179.52 Aligned_cols=274 Identities=14% Similarity=0.061 Sum_probs=174.5
Q ss_pred CCCcEEEecc-ccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEe
Q 002660 143 VWPVAIHGHY-ADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 221 (895)
Q Consensus 143 ~~pDvVh~h~-~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~ 221 (895)
.+||+||+|. +..++.++.+++.+|+|++++.++.-.... ...++.. ..++ ...+.+|.+++
T Consensus 85 ~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~~s~~~-----~~~~~~~-------~~r~-----~~~~~ad~~~~ 147 (365)
T TIGR00236 85 EKPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGLRTGDR-----YSPMPEE-------INRQ-----LTGHIADLHFA 147 (365)
T ss_pred cCCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCCCcCCC-----CCCCccH-------HHHH-----HHHHHHHhccC
Confidence 7899999996 466777888889999999876554311000 0000000 0111 12335899999
Q ss_pred CChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCch
Q 002660 222 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGM-EFHHIVPQDGDMDGETEGNEDNPASPDPPI 300 (895)
Q Consensus 222 ~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gi-d~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (895)
+|+...+.+.+. |.+.+++.+++||+ |...+..... . .
T Consensus 148 ~s~~~~~~l~~~-----------------------G~~~~~I~vign~~~d~~~~~~~~~-~-----------------~ 186 (365)
T TIGR00236 148 PTEQAKDNLLRE-----------------------NVKADSIFVTGNTVIDALLTNVEIA-Y-----------------S 186 (365)
T ss_pred CCHHHHHHHHHc-----------------------CCCcccEEEeCChHHHHHHHHHhhc-c-----------------c
Confidence 999877766432 33345899999996 4322211100 0 0
Q ss_pred hHHhhhhcCCCCCcEEEEEe-CC-CCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhc
Q 002660 301 WSEIMRFFTNPRKPVILALA-RP-DPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY 378 (895)
Q Consensus 301 ~~~~~~~~~~~~~~~il~vg-rl-~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~ 378 (895)
...+.+++ .+++++++.+ |. ...||+..+++|+..+....++..+ ++++.+.. + .... +.+.+
T Consensus 187 ~~~~~~~~--~~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~-vi~~~~~~-~--------~~~~---~~~~~ 251 (365)
T TIGR00236 187 SPVLSEFG--EDKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQI-VYPVHLNP-V--------VREP---LHKHL 251 (365)
T ss_pred hhHHHhcC--CCCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEE-EEECCCCh-H--------HHHH---HHHHh
Confidence 01122232 2345566555 43 2458999999999988533333333 33333211 0 1111 22334
Q ss_pred CCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEc-CCCCchhccccCCCeEEeCCCC
Q 002660 379 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVAT-KNGGPVDIHRVLDNGLLVDPHD 457 (895)
Q Consensus 379 ~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas-~~gg~~eiv~~~~~g~lv~p~d 457 (895)
+..++|.|.+.++..++..+|+.| |+++.+| |..++|||+||+|||++ +.|+..+++..+ .++++ +.|
T Consensus 252 ~~~~~v~~~~~~~~~~~~~~l~~a----d~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~lv-~~d 320 (365)
T TIGR00236 252 GDSKRVHLIEPLEYLDFLNLAANS----HLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNKLV-GTD 320 (365)
T ss_pred CCCCCEEEECCCChHHHHHHHHhC----CEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceEEe-CCC
Confidence 556789999999888999999999 9998876 56689999999999996 678888888754 56666 579
Q ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHH
Q 002660 458 QQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLS 500 (895)
Q Consensus 458 ~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~ 500 (895)
+++++++|.+++++++.+++++++...+....+++++++.+.+
T Consensus 321 ~~~i~~ai~~ll~~~~~~~~~~~~~~~~g~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 321 KENITKAAKRLLTDPDEYKKMSNASNPYGDGEASERIVEELLN 363 (365)
T ss_pred HHHHHHHHHHHHhChHHHHHhhhcCCCCcCchHHHHHHHHHHh
Confidence 9999999999999998888877655322234555555555443
No 125
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.71 E-value=3.5e-16 Score=175.74 Aligned_cols=250 Identities=14% Similarity=0.101 Sum_probs=164.2
Q ss_pred CCCcEEEeccc-cchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEe
Q 002660 143 VWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 221 (895)
Q Consensus 143 ~~pDvVh~h~~-~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~ 221 (895)
.+||+||+|.. ...+.+..+++..++|++++.|+..... .+. .. ...++ ...+.+|.+++
T Consensus 87 ~~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s~~------~~~-~~-------~~~r~-----~~~~~ad~~~~ 147 (363)
T cd03786 87 EKPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRSFD------RGM-PD-------EENRH-----AIDKLSDLHFA 147 (363)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEecccccCC------CCC-Cc-------hHHHH-----HHHHHhhhccC
Confidence 67999999964 4556677788888999998776532110 000 00 01111 13567899999
Q ss_pred CChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCch
Q 002660 222 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGM-EFHHIVPQDGDMDGETEGNEDNPASPDPPI 300 (895)
Q Consensus 222 ~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gi-d~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (895)
+|+...+.+.+ +|.+..++.+++|++ |...+.+.....
T Consensus 148 ~s~~~~~~l~~-----------------------~G~~~~kI~vign~v~d~~~~~~~~~~~------------------ 186 (363)
T cd03786 148 PTEEARRNLLQ-----------------------EGEPPERIFVVGNTMIDALLRLLELAKK------------------ 186 (363)
T ss_pred CCHHHHHHHHH-----------------------cCCCcccEEEECchHHHHHHHHHHhhcc------------------
Confidence 99877666433 233445899999985 543332111000
Q ss_pred hHHhhhhcCCCCCcEEEEEeCCCC---CCCHHHHHHHHHhcccccCCCcEEEEE-ecCCCccccccchHHHHHHHHHHHH
Q 002660 301 WSEIMRFFTNPRKPVILALARPDP---KKNITTLVKAFGECRPLRELANLTLIM-GNRDGIDEMSSTSASVLLSVLKLID 376 (895)
Q Consensus 301 ~~~~~~~~~~~~~~~il~vgrl~~---~Kgi~~ll~A~~~l~~~~~~~~l~liv-G~~~~~~~~~~~~~~~~~~l~~~~~ 376 (895)
...++.++.++++.++++.+|... .||++.+++|+..+.. . ++.+++ |.++. ..++.+.+.
T Consensus 187 ~~~~~~~~~~~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~--~--~~~vi~~~~~~~-----------~~~l~~~~~ 251 (363)
T cd03786 187 ELILELLGLLPKKYILVTLHRVENVDDGEQLEEILEALAELAE--E--DVPVVFPNHPRT-----------RPRIREAGL 251 (363)
T ss_pred chhhhhcccCCCCEEEEEeCCccccCChHHHHHHHHHHHHHHh--c--CCEEEEECCCCh-----------HHHHHHHHH
Confidence 001123334444557778898775 7999999999998842 1 454443 33321 244555666
Q ss_pred hcCC-CCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCC-CCchhccccCCCeEEeC
Q 002660 377 KYDL-YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN-GGPVDIHRVLDNGLLVD 454 (895)
Q Consensus 377 ~~~l-~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~-gg~~eiv~~~~~g~lv~ 454 (895)
++++ .++|.|.+..+.+++..+|+.| |++|.+|- | +..||+++|+|+|++.. +...+++.++ .+..+.
T Consensus 252 ~~~~~~~~v~~~~~~~~~~~~~l~~~a----d~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~g-~~~~~~ 321 (363)
T cd03786 252 EFLGHHPNVLLISPLGYLYFLLLLKNA----DLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVESG-TNVLVG 321 (363)
T ss_pred hhccCCCCEEEECCcCHHHHHHHHHcC----cEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhhee-eEEecC
Confidence 6665 5689999988888999999999 99999983 4 47899999999999874 4455665432 233332
Q ss_pred CCCHHHHHHHHHHHHhCHHHHHHH
Q 002660 455 PHDQQSVADALLKLVADKQLWARC 478 (895)
Q Consensus 455 p~d~~~la~ai~~ll~~~~~~~~~ 478 (895)
.|+++++++|.++++++..+..+
T Consensus 322 -~~~~~i~~~i~~ll~~~~~~~~~ 344 (363)
T cd03786 322 -TDPEAILAAIEKLLSDEFAYSLM 344 (363)
T ss_pred -CCHHHHHHHHHHHhcCchhhhcC
Confidence 37999999999999988766554
No 126
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=99.71 E-value=1.6e-15 Score=176.39 Aligned_cols=336 Identities=15% Similarity=0.144 Sum_probs=218.3
Q ss_pred CCCcEEEeccccchhHHHHHhcc--------------CCCCEEEEeCCCchhhHH----HHHHH------h--hccHHHH
Q 002660 143 VWPVAIHGHYADAGDSAALLSGA--------------LNVPMLFTGHSLGRDKLE----QLLKQ------A--RLSRDEI 196 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~~~--------------~~ip~v~t~H~~~~~~~~----~~~~~------~--~~~~~~~ 196 (895)
.+||+||+|.|.++++...+.+. ....+|+|.|+..++-.+ .++.. . .++...+
T Consensus 160 ~~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~~~~~~gl~~~~~ 239 (601)
T TIGR02094 160 IDPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGDYAANLGLPREQL 239 (601)
T ss_pred CCceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhhhhhHhCCCHHHH
Confidence 57999999999888777664221 136689999998765531 11110 0 0011111
Q ss_pred Hhhhhhh----HHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCC
Q 002660 197 NATYKIM----RRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEF 272 (895)
Q Consensus 197 ~~~~~~~----~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~ 272 (895)
....... ..+..-+.++..||.|.++|+...+-..+....+.+..+ ....++.-|-||||+
T Consensus 240 ~~~~~~~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l~~~l~~~~~---------------~~~~~i~gItNGId~ 304 (601)
T TIGR02094 240 LALGRENPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKMWQFLYPGYE---------------EEEVPIGYVTNGVHN 304 (601)
T ss_pred HhhhhhccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHHHHhhhhhcc---------------cccCCccceeCCccc
Confidence 0000000 112234568899999999999777633332222111000 001158889999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCC------------------CCCchhH----Hhhh----------------------h-
Q 002660 273 HHIVPQDGDMDGETEGNEDNPAS------------------PDPPIWS----EIMR----------------------F- 307 (895)
Q Consensus 273 ~~f~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~----~~~~----------------------~- 307 (895)
..+.+..... ....+....+. ..-.... .+.+ +
T Consensus 305 ~~W~~~~~~~--l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~g 382 (601)
T TIGR02094 305 PTWVAPELRD--LYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMATD 382 (601)
T ss_pred cccCCHHHHH--HHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhhhc
Confidence 9987532110 00000000000 0000000 1111 1
Q ss_pred -cCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc--cCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCc
Q 002660 308 -FTNPRKPVILALARPDPKKNITTLVKAFGECRPL--RELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQ 383 (895)
Q Consensus 308 -~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~--~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~ 383 (895)
...++.+++++++|+...||.++++.++.++.+. .+...+++ ++|.+...+.+ ..++...+..+.++....++
T Consensus 383 l~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p~d~~---gk~~i~~i~~la~~~~~~~k 459 (601)
T TIGR02094 383 RFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHPADGE---GKEIIQRIVEFSKRPEFRGR 459 (601)
T ss_pred cccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcccch---HHHHHHHHHHHHhcccCCCC
Confidence 1456788999999999999999999999888532 22233554 66777543332 35677788888877667778
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEe-cCC-CCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCC------
Q 002660 384 VAYPKHHKQSDVPEIYRLAAKTKGVFIN-PAF-IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDP------ 455 (895)
Q Consensus 384 v~~~g~~~~~el~~ly~~A~~~~dv~v~-ps~-~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p------ 455 (895)
|.|....+..--..+|+.| |++++ |+. +|++|++-+=||..|.+.+++..|...|.. ++.+|+.+.+
T Consensus 460 v~f~~~Yd~~lA~~i~aG~----Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~~~~~~ 534 (601)
T TIGR02094 460 IVFLENYDINLARYLVSGV----DVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDGEEYDD 534 (601)
T ss_pred EEEEcCCCHHHHHHHhhhh----eeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCCccccc
Confidence 8887665443344455556 99999 888 999999999999999999999999988876 6689999984
Q ss_pred ------CCHHHHHHHHHHHH-----hC-----HHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHH
Q 002660 456 ------HDQQSVADALLKLV-----AD-----KQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 456 ------~d~~~la~ai~~ll-----~~-----~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~ 503 (895)
.|.++|-++|.+.+ ++ |..|.++.+++++.. ..|||++++++|.+.|-
T Consensus 535 ~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~yy 599 (601)
T TIGR02094 535 EEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKFY 599 (601)
T ss_pred cccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHhC
Confidence 78899999997765 23 667999999999987 69999999999998873
No 127
>PLN02151 trehalose-phosphatase
Probab=99.71 E-value=1.9e-16 Score=169.81 Aligned_cols=204 Identities=11% Similarity=0.147 Sum_probs=127.4
Q ss_pred cccCeEEEEEecCCCC--------cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEc
Q 002660 609 RRRKHIFVISVDCDST--------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 680 (895)
Q Consensus 609 ~~~~kli~~DiDGTL~--------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 680 (895)
.+++.+||+|+||||. ..+++.++++|++|.+. ..|+|+|||++..+.+++.-.++ +++++
T Consensus 95 ~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~~-----~~vaIvSGR~~~~l~~~~~~~~l------~laGs 163 (354)
T PLN02151 95 EGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAKC-----FPTAIVSGRCREKVSSFVKLTEL------YYAGS 163 (354)
T ss_pred cCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhcC-----CCEEEEECCCHHHHHHHcCCccc------eEEEe
Confidence 4567899999999992 36788999999999853 68999999999999998865454 69999
Q ss_pred CCceEeeccCCCC---C---CCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEEE
Q 002660 681 SGSDLYYSTLNSE---D---GPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFS 754 (895)
Q Consensus 681 nGa~I~~~~~~~~---~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 754 (895)
||+++........ . ........|...+..- ...+.+.....++...+. ..+++++|
T Consensus 164 HG~e~~~p~~g~~~~~~~~~~~~~~~~~~~~~i~~v--~~~l~~~~~~~pG~~VE~----------------K~~slavH 225 (354)
T PLN02151 164 HGMDIKGPEQGSKYKKENQSLLCQPATEFLPVINEV--YKKLVEKTKSIPGAKVEN----------------NKFCASVH 225 (354)
T ss_pred CCceeecCCCCccccccccccccccchhhHHHHHHH--HHHHHHHHhcCCCCEEEe----------------cCcEEEEE
Confidence 9999875421100 0 0001111222111100 001111112233333333 26778888
Q ss_pred eeCCCCCccHHHHHHHHHhccCeE-EEEEecCCeeEEeecC-CCChHHHHHHHHHHhCCCcc--cEEEEecCCCCCCccc
Q 002660 755 VQKPGMTPPVKELRKVLRIQALRC-HVIYCQNGSRINVIPV-LASRSQALRYLYLRWGVELS--KMVVFVGESGDTDYEG 830 (895)
Q Consensus 755 ~~~~~~~~~~~~l~~~l~~~~~~~-~~~~s~~~~~lEI~p~-g~sKg~al~~L~~~~gi~~~--~viaf~Gd~nn~D~~e 830 (895)
++..+.. ...++...+....... .+...++.+.+||.|. ++|||.|+++|++.++..-. .+.+|+||+-+ | ++
T Consensus 226 YR~a~~~-~~~~l~~~l~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~T-D-ED 302 (354)
T PLN02151 226 FRCVEEN-KWSDLANQVRSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRT-D-ED 302 (354)
T ss_pred eCCCChH-HHHHHHHHHHHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCc-H-HH
Confidence 8654321 1233334333211111 1334456569999995 99999999999999886532 45677888886 9 99
Q ss_pred cccCc-----ceEEEecCc
Q 002660 831 LLGGV-----HKTVILKGI 844 (895)
Q Consensus 831 Ml~~a-----g~gVaMgNa 844 (895)
||+.+ |+||-+|..
T Consensus 303 aF~~L~~~~~G~gI~Vg~~ 321 (354)
T PLN02151 303 AFKILRDKKQGLGILVSKY 321 (354)
T ss_pred HHHHHhhcCCCccEEeccC
Confidence 99864 667777643
No 128
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.69 E-value=4.5e-14 Score=144.78 Aligned_cols=374 Identities=15% Similarity=0.132 Sum_probs=237.0
Q ss_pred HHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCcccccccCCC
Q 002660 34 YVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWP 113 (895)
Q Consensus 34 ~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~ 113 (895)
.+..=|..|++.| .+|+++.-..+.| . +++...+.++|+.+|.-|.-.+. |
T Consensus 28 RMqYHA~Sla~~g--f~VdliGy~~s~p---------~------------e~l~~hprI~ih~m~~l~~~~~~------p 78 (444)
T KOG2941|consen 28 RMQYHALSLAKLG--FQVDLIGYVESIP---------L------------EELLNHPRIRIHGMPNLPFLQGG------P 78 (444)
T ss_pred HHHHHHHHHHHcC--CeEEEEEecCCCC---------h------------HHHhcCCceEEEeCCCCcccCCC------c
Confidence 4556677888899 9999996542211 1 22334679999999865531111 1
Q ss_pred ChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccc---cchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhh
Q 002660 114 HIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYA---DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQAR 190 (895)
Q Consensus 114 ~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~---~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~ 190 (895)
.+-...-+++..+..+..+|.. -..||+|....+ ....++...+...|.+++++.|++++. ..--+..|.
T Consensus 79 ~~~~l~lKvf~Qfl~Ll~aL~~------~~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ys-l~l~~~~g~ 151 (444)
T KOG2941|consen 79 RVLFLPLKVFWQFLSLLWALFV------LRPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYS-LQLKLKLGF 151 (444)
T ss_pred hhhhhHHHHHHHHHHHHHHHHh------ccCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHH-HHHHhhcCC
Confidence 1111122222222222222222 156999999876 345555666678899999999998775 111122222
Q ss_pred ccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCE------E
Q 002660 191 LSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRM------A 264 (895)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v------~ 264 (895)
. ...-+..+++ |+..-+.||.-+|+|+.+.+++...++-. +-...|.+|.++- +
T Consensus 152 ~-----h~lV~l~~~~--E~~fgk~a~~nLcVT~AMr~dL~qnWgi~-------------ra~v~YDrPps~~~~l~~~H 211 (444)
T KOG2941|consen 152 Q-----HPLVRLVRWL--EKYFGKLADYNLCVTKAMREDLIQNWGIN-------------RAKVLYDRPPSKPTPLDEQH 211 (444)
T ss_pred C-----CchHHHHHHH--HHHhhcccccchhhHHHHHHHHHHhcCCc-------------eeEEEecCCCCCCCchhHHH
Confidence 1 1122344444 77788999999999999888876655411 1122233333200 0
Q ss_pred --EeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhh------hcCCCCCcEEEEEeCCCCCCCHHHHHHHHH
Q 002660 265 --IIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMR------FFTNPRKPVILALARPDPKKNITTLVKAFG 336 (895)
Q Consensus 265 --vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~ 336 (895)
..+-+-|...|.... ++.+........++ ........++++.....+..++..|++|+.
T Consensus 212 ~lf~~l~~d~~~f~ar~-------------~q~~~~~~taf~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL~ 278 (444)
T KOG2941|consen 212 ELFMKLAGDHSPFRARE-------------PQDKALERTAFTKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLEALV 278 (444)
T ss_pred HHHhhhccccchhhhcc-------------cccchhhhhhHhhhcccchhhhccCCCeEEEecCCCCCcccHHHHHHHHH
Confidence 111112222222110 00011111111111 112334557778888999999999999998
Q ss_pred hc-----ccccCCCcEE-EEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEE
Q 002660 337 EC-----RPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFI 410 (895)
Q Consensus 337 ~l-----~~~~~~~~l~-livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v 410 (895)
.. .+....|++. +|.|.||. .+...+.+.+++|...-....++..+|.+.++..|+ .+|++
T Consensus 279 ~y~~~~~~~~~~lP~llciITGKGPl-----------kE~Y~~~I~~~~~~~v~~~tpWL~aEDYP~ll~saD--lGVcL 345 (444)
T KOG2941|consen 279 IYEEQLYDKTHNLPSLLCIITGKGPL-----------KEKYSQEIHEKNLQHVQVCTPWLEAEDYPKLLASAD--LGVCL 345 (444)
T ss_pred hhhhhhhhccCCCCcEEEEEcCCCch-----------hHHHHHHHHHhcccceeeeecccccccchhHhhccc--cceEe
Confidence 43 2234456765 46688885 355667888899987777789999999999999992 23566
Q ss_pred ecCC-CCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHH
Q 002660 411 NPAF-IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVA----DKQLWARCRQNGLKN 485 (895)
Q Consensus 411 ~ps~-~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~----~~~~~~~~~~~~~~~ 485 (895)
++|. .=-.|++++....||+||+|-+.....|+|+++.||++++ |.+++++.|.-+++ +.....++.++.++.
T Consensus 346 HtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~ 423 (444)
T KOG2941|consen 346 HTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLDELVKHGENGLVFE--DSEELAEQLQMLFKNFPDNADELNQLKKNLREE 423 (444)
T ss_pred eecCcccCcchhHHHhhcCCCceeeecchhHHHHHhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHH
Confidence 6654 2347899999999999999999999999999999999998 99999999999998 778888888888887
Q ss_pred hhcCCHH
Q 002660 486 IHLFSWP 492 (895)
Q Consensus 486 ~~~~s~~ 492 (895)
. ...|+
T Consensus 424 ~-e~RW~ 429 (444)
T KOG2941|consen 424 Q-ELRWD 429 (444)
T ss_pred H-hhhHH
Confidence 4 34443
No 129
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=99.67 E-value=8.7e-16 Score=158.70 Aligned_cols=193 Identities=12% Similarity=0.152 Sum_probs=129.9
Q ss_pred cccCeEEEEEecCCCC--------cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEc
Q 002660 609 RRRKHIFVISVDCDST--------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 680 (895)
Q Consensus 609 ~~~~kli~~DiDGTL~--------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 680 (895)
.+++++||+|+||||+ ..+.+.++++|+.|..+ .++.++|.|||+...+..++.-.++ ++||+
T Consensus 15 ~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~---~~~~v~iiSGR~~~~l~~~~~v~~i------~l~ae 85 (266)
T COG1877 15 NARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASD---PRNVVAIISGRSLAELERLFGVPGI------GLIAE 85 (266)
T ss_pred cccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhc---CCCeEEEEeCCCHHHHHHhcCCCCc------cEEEe
Confidence 7889999999999993 45678899999999998 4678999999999999999986565 59999
Q ss_pred CCceEeeccC-CCCCCCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEEEeeCCC
Q 002660 681 SGSDLYYSTL-NSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPG 759 (895)
Q Consensus 681 nGa~I~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 759 (895)
||+++..... +........+..|...+. +.++..+.+++++..+.+ .+.+.||++..+
T Consensus 86 hGa~~r~~~g~~~~~~~~~~~~~~~~~v~-----~~l~~~v~r~pGs~iE~K----------------~~a~~~Hyr~a~ 144 (266)
T COG1877 86 HGAEVRDPNGKWWINLAEEADLRWLKEVA-----AILEYYVERTPGSYIERK----------------GFAVALHYRNAE 144 (266)
T ss_pred cceEEecCCCCeeEecCHHHHhhHHHHHH-----HHHHHHhhcCCCeEEEEc----------------CcEEEEeeccCC
Confidence 9999964432 111111111122322221 234455556666665554 455667775444
Q ss_pred CCc-cHHHHHHHHHhccCe-EEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcc
Q 002660 760 MTP-PVKELRKVLRIQALR-CHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVH 836 (895)
Q Consensus 760 ~~~-~~~~l~~~l~~~~~~-~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag 836 (895)
... ....+.......... +++ ..+...+|+.|.++|||.++++++++...+- .++.|.||+-+ | ++||+++.
T Consensus 145 ~~~~~~~a~~~~~~~~~~~~~~v--~~gk~vVEvrp~~~~KG~a~~~i~~~~~~~~-~~~~~aGDD~T-D-E~~F~~v~ 218 (266)
T COG1877 145 DDEGAALALAEAATLINELKLRV--TPGKMVVELRPPGVSKGAAIKYIMDELPFDG-RFPIFAGDDLT-D-EDAFAAVN 218 (266)
T ss_pred chhhHHHHHHHHHhccccccEEE--EeCceEEEEeeCCcchHHHHHHHHhcCCCCC-CcceecCCCCc-c-HHHHHhhc
Confidence 221 112222222222221 333 3444599999999999999999999887665 45555788776 8 99999986
No 130
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=99.65 E-value=3.9e-16 Score=163.36 Aligned_cols=210 Identities=14% Similarity=0.183 Sum_probs=105.4
Q ss_pred EEEecCCCC--------cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEee
Q 002660 616 VISVDCDST--------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYY 687 (895)
Q Consensus 616 ~~DiDGTL~--------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~ 687 (895)
|+|+||||. ..+++.++++|++|.+. +++.|+|+|||+...+..+..-.++ +++++||+++..
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~---~~~~v~IvSGR~~~~~~~~~~~~~i------~l~gehG~e~~~ 71 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAAD---PNNTVAIVSGRSLDDLERFGGIPNI------GLAGEHGAEIRR 71 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHH---SE--EEEE-SS-HHHHHHH-S-SS-------EEEEGGGTEEEE
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhcc---CCCEEEEEEeCCHHHhHHhcCCCCc------eEEEEeeEEecc
Confidence 699999992 45778999999999998 4778999999999996555443344 699999999998
Q ss_pred ccCCCC-CCCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEEEeeCCCCC---cc
Q 002660 688 STLNSE-DGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMT---PP 763 (895)
Q Consensus 688 ~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~---~~ 763 (895)
.+.... ......+..|...+.. .++......++...+.+ .+.+.|+++..... ..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~-----~l~~~~~~~pG~~iE~K----------------~~sv~~Hyr~~~~~~~~~~ 130 (235)
T PF02358_consen 72 PGGSEWTNLPADEDLEWKDEVRE-----ILEYFAERTPGSFIEDK----------------EFSVAFHYRNAPPEFGEAQ 130 (235)
T ss_dssp TTE-EEE-TTGGGGHHHHHHHHH-----HHTTHHHHSTT-EEEEE----------------TTEEEEE-TTS-ST----T
T ss_pred CccccccccccccchHHHHHHHH-----HHHHHHhhccCcEEEEC----------------CeEEEEEecCCCcchhhhH
Confidence 753110 0001111223222211 11122223444444443 56677887654422 13
Q ss_pred HHHHHHHHHhc---cCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHhCCC--cccEEEEecCCCCCCccccccCc---
Q 002660 764 VKELRKVLRIQ---ALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVE--LSKMVVFVGESGDTDYEGLLGGV--- 835 (895)
Q Consensus 764 ~~~l~~~l~~~---~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~gi~--~~~viaf~Gd~nn~D~~eMl~~a--- 835 (895)
..++.+.+... ...+.++ .+...+||.|.+++||.|+++|++.++.. ..++++|+||+-+ | ++||+.+
T Consensus 131 ~~~l~~~l~~~~~~~~~~~v~--~g~~~vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~t-D-E~~f~~~~~~ 206 (235)
T PF02358_consen 131 ARELAEQLREILASHPGLEVV--PGKKVVEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRT-D-EDAFRALREL 206 (235)
T ss_dssp HHHHHHHHHHHHHHH-T-EEE--E-SSEEEEE-TT--HHHHHHHHHTTS---------EEEEESSHH-H-HHHHHTTTTS
T ss_pred HHHHHHHHHHHHHhCCCEEEE--ECCCEEEEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCC-C-HHHHHHHHhc
Confidence 44555555432 1234433 33349999999999999999999998764 1234445777665 8 9999984
Q ss_pred ---ceEEEecCccccccccccccCCCCCCC
Q 002660 836 ---HKTVILKGICSSSSNQIHANRSYPLSD 862 (895)
Q Consensus 836 ---g~gVaMgNa~~~~~~~~~a~~~~~~~~ 862 (895)
|++|-++... ...+++..+|+++|
T Consensus 207 ~~~~~~i~V~~~~---~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 207 EEGGFGIKVGSVS---VGEKPTAASYRLDD 233 (235)
T ss_dssp ----EEEEES--------------------
T ss_pred ccCCCCeEEEeec---cccccccccccccc
Confidence 5688888654 34556666677664
No 131
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=99.54 E-value=1.6e-13 Score=158.02 Aligned_cols=167 Identities=12% Similarity=0.148 Sum_probs=138.3
Q ss_pred EEEEEe--CCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCC-----------
Q 002660 315 VILALA--RPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY----------- 381 (895)
Q Consensus 315 ~il~vg--rl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~----------- 381 (895)
.+++++ |+ +.|.++.+|+|+..+....|...+. +.|.+.+ +. ....+.++++.+++.
T Consensus 321 ~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~-~~gy~~~-~~-------~~~~l~~~i~~~~~~~~~~~~~~~~~ 390 (519)
T TIGR03713 321 TEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELK-ILTYNND-ND-------ITQLLEDILEQINEEYNQDKNFFSLS 390 (519)
T ss_pred eEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEE-EEEecCc-hh-------HHHHHHHHHHHHHhhhchhhhccccc
Confidence 455555 99 9999999999999986444444442 4676643 11 123444444444444
Q ss_pred ------------------CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhc
Q 002660 382 ------------------GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDI 443 (895)
Q Consensus 382 ------------------~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~ei 443 (895)
..|.|.|..+..++.+.|..| .++|.+|..|+|+ +++||+++|+|+| .-|+.++
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~a----rl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~~~ 462 (519)
T TIGR03713 391 EQDENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKL----RLIIDLSKEPDLY-TQISGISAGIPQI---NKVETDY 462 (519)
T ss_pred hhhhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhh----eEEEECCCCCChH-HHHHHHHcCCCee---ecCCcee
Confidence 689999997777999999999 9999999999999 9999999999999 6667899
Q ss_pred cccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Q 002660 444 HRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSR 501 (895)
Q Consensus 444 v~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~ 501 (895)
|.++.||+++ +|..+|+++|..+|.+++.|+++...+.+.+++||-+.+.+++.+.
T Consensus 463 V~d~~NG~li--~d~~~l~~al~~~L~~~~~wn~~~~~sy~~~~~yS~~~i~~kW~~~ 518 (519)
T TIGR03713 463 VEHNKNGYII--DDISELLKALDYYLDNLKNWNYSLAYSIKLIDDYSSENIIERLNEL 518 (519)
T ss_pred eEcCCCcEEe--CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHHHhh
Confidence 9999999999 5999999999999999999999999999999999999999888764
No 132
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=99.54 E-value=6.9e-13 Score=156.96 Aligned_cols=187 Identities=16% Similarity=0.204 Sum_probs=147.4
Q ss_pred CCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc--cCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEE
Q 002660 309 TNPRKPVILALARPDPKKNITTLVKAFGECRPL--RELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVA 385 (895)
Q Consensus 309 ~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~--~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~ 385 (895)
.+++.++|+++.|+...|+.+++++.+.++.+. .+...+++ +.|.+...+. ..+++...+..+.+.....++|.
T Consensus 474 ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP~d~---~gK~iIk~i~~~a~~p~~~~kVv 550 (778)
T cd04299 474 LDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHPADE---PGKELIQEIVEFSRRPEFRGRIV 550 (778)
T ss_pred cCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCccch---HHHHHHHHHHHHHhCcCCCCcEE
Confidence 456777999999999999999999998887432 22223554 6677643332 23667888888888777778888
Q ss_pred eCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCC--------
Q 002660 386 YPKHHKQSDVPEIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDP-------- 455 (895)
Q Consensus 386 ~~g~~~~~el~~ly~~A~~~~dv~v~ps~--~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p-------- 455 (895)
|+...+..--..+++.| ||+++||+ .|++|++-+=||.-|.+-+++..|...|.- ++.||+.+.+
T Consensus 551 fle~Yd~~lA~~LvaG~----DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~~~~~~~~~ 625 (778)
T cd04299 551 FLEDYDMALARHLVQGV----DVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGDGDEYEDDE 625 (778)
T ss_pred EEcCCCHHHHHHHHhhh----hhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCCCccccChh
Confidence 87776544445566666 99999999 999999999999999999999999998886 7889999987
Q ss_pred ----CCHHHHHHHHHHHHh----C------HHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHH
Q 002660 456 ----HDQQSVADALLKLVA----D------KQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 456 ----~d~~~la~ai~~ll~----~------~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~ 503 (895)
.|.++|-+.|.+.+- + |..|.++.+++++.+ ..|||.+++++|.+.+-
T Consensus 626 ~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y 688 (778)
T cd04299 626 YQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFY 688 (778)
T ss_pred hcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhH
Confidence 456667777754332 3 778999999999998 59999999999988766
No 133
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=99.47 E-value=2e-12 Score=144.59 Aligned_cols=327 Identities=18% Similarity=0.230 Sum_probs=180.1
Q ss_pred CCcEEEeccccchhHHHHHhcc-CCCCEEEEeCCCchhhHHHHHHHh---------hccHHHHHhhhhhhHHHHHHHhhh
Q 002660 144 WPVAIHGHYADAGDSAALLSGA-LNVPMLFTGHSLGRDKLEQLLKQA---------RLSRDEINATYKIMRRIEAEELSL 213 (895)
Q Consensus 144 ~pDvVh~h~~~~~~~~~~~~~~-~~ip~v~t~H~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~e~~~l 213 (895)
..=|.|+|.|.+|....++.++ ..+.+|||.|....-. .+..+ .+........+.+..+.-.|+.+.
T Consensus 143 ~~ViaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR---~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA 219 (633)
T PF05693_consen 143 PKVIAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGR---YLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAA 219 (633)
T ss_dssp EEEEEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHH---HHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHH
T ss_pred CcEEEEechHhHhHHHHHHhccCCCeeEEEEecccchhh---HhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHH
Confidence 3557899999877766665543 4688999999763322 11111 111233334455666777799999
Q ss_pred cccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 002660 214 DASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNP 293 (895)
Q Consensus 214 ~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~ 293 (895)
..||.+.++|+-.+.+-....+. . .=.|+|||++.+.|..... +++..
T Consensus 220 ~~AdvFTTVSeITa~Ea~~LL~r-~-----------------------pDvV~pNGl~v~~~~~~~e--------fqnl~ 267 (633)
T PF05693_consen 220 HYADVFTTVSEITAKEAEHLLKR-K-----------------------PDVVTPNGLNVDKFPALHE--------FQNLH 267 (633)
T ss_dssp HHSSEEEESSHHHHHHHHHHHSS--------------------------SEE----B-GGGTSSTTH--------HHHHH
T ss_pred HhcCeeeehhhhHHHHHHHHhCC-C-----------------------CCEEcCCCccccccccchH--------HHHHH
Confidence 99999999987655544333221 1 1158999999988764320 00000
Q ss_pred CCCCCchhHHhhhhc-----CC-CCCcEEEEEeCCC-CCCCHHHHHHHHHhcccc----cCCCcEE-EEE----------
Q 002660 294 ASPDPPIWSEIMRFF-----TN-PRKPVILALARPD-PKKNITTLVKAFGECRPL----RELANLT-LIM---------- 351 (895)
Q Consensus 294 ~~~~~~~~~~~~~~~-----~~-~~~~~il~vgrl~-~~Kgi~~ll~A~~~l~~~----~~~~~l~-liv---------- 351 (895)
...........+..+ .+ .+..+|...||.. ..||++.+|+|+.+|... .....++ +|+
T Consensus 268 ~~~k~ki~~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~v 347 (633)
T PF05693_consen 268 AKAKEKIHEFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFNV 347 (633)
T ss_dssp HHHHHHHHHHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-H
T ss_pred HHHHHHHHHHHHHHhcccCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcCH
Confidence 000111222222221 11 2356788889988 559999999999998531 1122332 333
Q ss_pred ---------------------------------ecCCCccccccch-HH-------------------------HHHHHH
Q 002660 352 ---------------------------------GNRDGIDEMSSTS-AS-------------------------VLLSVL 372 (895)
Q Consensus 352 ---------------------------------G~~~~~~~~~~~~-~~-------------------------~~~~l~ 372 (895)
|.-++.+++-... .- -.+.+.
T Consensus 348 e~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpIL 427 (633)
T PF05693_consen 348 ESLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPIL 427 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHH
Confidence 1111111110000 00 011233
Q ss_pred HHHHhcCCC----Cc--EEeCC-CCC------CCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCC
Q 002660 373 KLIDKYDLY----GQ--VAYPK-HHK------QSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG 439 (895)
Q Consensus 373 ~~~~~~~l~----~~--v~~~g-~~~------~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg 439 (895)
..+.++++. ++ |.|++ +++ .-+..++++.+ |+.|+||.+||||.+.+|+.++|+|-|+|+..|
T Consensus 428 n~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~Gc----dLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsG 503 (633)
T PF05693_consen 428 NMIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGC----DLGVFPSYYEPWGYTPLECTAFGVPSITTNLSG 503 (633)
T ss_dssp HHHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHHS----SEEEE--SSBSS-HHHHHHHHTT--EEEETTBH
T ss_pred HHHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhccC----ceeeeccccccccCChHHHhhcCCceeeccchh
Confidence 333334432 22 33432 222 23788999999 999999999999999999999999999999988
Q ss_pred chhcccc-----CCCeEEe-CC--CC----HHHHHHHHHHHHh-CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHccc
Q 002660 440 PVDIHRV-----LDNGLLV-DP--HD----QQSVADALLKLVA-DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCK 506 (895)
Q Consensus 440 ~~eiv~~-----~~~g~lv-~p--~d----~~~la~ai~~ll~-~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~~ 506 (895)
....+.+ ...|+.| +- .+ .+++++.|.+... ++.++..+++++.+..+..+|+.....|.+.+.-.+
T Consensus 504 FG~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay~~AL 583 (633)
T PF05693_consen 504 FGCWMQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAYDLAL 583 (633)
T ss_dssp HHHHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 7765543 2356544 32 23 3456666666665 556677777777777789999999999999998877
Q ss_pred CCC
Q 002660 507 PRH 509 (895)
Q Consensus 507 ~~~ 509 (895)
++.
T Consensus 584 ~~a 586 (633)
T PF05693_consen 584 RRA 586 (633)
T ss_dssp HHH
T ss_pred Hhc
Confidence 653
No 134
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.43 E-value=7.7e-12 Score=140.69 Aligned_cols=251 Identities=16% Similarity=0.019 Sum_probs=148.5
Q ss_pred CCCcEEEeccc-cchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEe
Q 002660 143 VWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 221 (895)
Q Consensus 143 ~~pDvVh~h~~-~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~ 221 (895)
.+||+|+++.. ...+.....++.+|+|+++++.-- .|.. . ... -+...+.+|.|++
T Consensus 88 ~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i~P~-~waw------~-----------~~~-----~r~l~~~~d~v~~ 144 (385)
T TIGR00215 88 AKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYISPQ-VWAW------R-----------KWR-----AKKIEKATDFLLA 144 (385)
T ss_pred cCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEeCCc-Hhhc------C-----------cch-----HHHHHHHHhHhhc
Confidence 78999999875 223334447788899999665211 0100 0 000 1224568899999
Q ss_pred CChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchh
Q 002660 222 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 301 (895)
Q Consensus 222 ~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (895)
+++.+.+.+. .+. + ++.++.|++-...... . +...
T Consensus 145 ~~~~e~~~~~-~~g-----------------~--------~~~~vGnPv~~~~~~~-~------------------~~~~ 179 (385)
T TIGR00215 145 ILPFEKAFYQ-KKN-----------------V--------PCRFVGHPLLDAIPLY-K------------------PDRK 179 (385)
T ss_pred cCCCcHHHHH-hcC-----------------C--------CEEEECCchhhhcccc-C------------------CCHH
Confidence 9886655432 111 1 5667777763221110 0 0111
Q ss_pred HHhhhhcCCCCCcEEEEE--eCCCC-CCCHHHHHHHHHhcccccCCCcEEE-E-EecCCCccccccchHHHHHHHHHHHH
Q 002660 302 SEIMRFFTNPRKPVILAL--ARPDP-KKNITTLVKAFGECRPLRELANLTL-I-MGNRDGIDEMSSTSASVLLSVLKLID 376 (895)
Q Consensus 302 ~~~~~~~~~~~~~~il~v--grl~~-~Kgi~~ll~A~~~l~~~~~~~~l~l-i-vG~~~~~~~~~~~~~~~~~~l~~~~~ 376 (895)
..+++++.++++++|+.+ +|..+ .|++..+++|++.+.+. .+++.+ + ++++.. ...+.+...
T Consensus 180 ~~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~--~p~~~~vi~~~~~~~-----------~~~~~~~~~ 246 (385)
T TIGR00215 180 SAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQ--EPDLRRVLPVVNFKR-----------RLQFEQIKA 246 (385)
T ss_pred HHHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHh--CCCeEEEEEeCCchh-----------HHHHHHHHH
Confidence 234456666677777654 37666 78999999999988643 345443 3 333321 123334444
Q ss_pred hcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcC-CCCch--------------
Q 002660 377 KYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK-NGGPV-------------- 441 (895)
Q Consensus 377 ~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~-~gg~~-------------- 441 (895)
.+++...|.+... ++..+|+.| |++|.+| |.+.+|+|+||+|+|... .....
T Consensus 247 ~~~~~~~v~~~~~----~~~~~l~aA----Dl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~ 313 (385)
T TIGR00215 247 EYGPDLQLHLIDG----DARKAMFAA----DAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYIS 313 (385)
T ss_pred HhCCCCcEEEECc----hHHHHHHhC----CEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeee
Confidence 5554445655433 677899999 9999998 777779999999998872 21111
Q ss_pred --hccccCCCe--EEeCCCCHHHHHHHHHHHHhCH----HHHHHHHHHHHHHhh
Q 002660 442 --DIHRVLDNG--LLVDPHDQQSVADALLKLVADK----QLWARCRQNGLKNIH 487 (895)
Q Consensus 442 --eiv~~~~~g--~lv~p~d~~~la~ai~~ll~~~----~~~~~~~~~~~~~~~ 487 (895)
.++.+.... ++-+--+++.+++++.++++|+ +.++++.+...+..+
T Consensus 314 ~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~ 367 (385)
T TIGR00215 314 LPNILANRLLVPELLQEECTPHPLAIALLLLLENGLKAYKEMHRERQFFEELRQ 367 (385)
T ss_pred ccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHH
Confidence 112111111 1112346889999999999999 877777666555543
No 135
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=99.42 E-value=1.4e-13 Score=131.12 Aligned_cols=131 Identities=31% Similarity=0.440 Sum_probs=92.4
Q ss_pred CcEEEEEeCCCCCCCHHHHHH-HHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCC
Q 002660 313 KPVILALARPDPKKNITTLVK-AFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHH 390 (895)
Q Consensus 313 ~~~il~vgrl~~~Kgi~~ll~-A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~ 390 (895)
-++|+++|++.+.|+++.+++ |+.++.+.. +++.+ ++|.+++ .++ ++ ..++|.|+|++
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~--p~~~l~i~G~~~~--~l~-----------~~-----~~~~v~~~g~~ 61 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKH--PDIELIIIGNGPD--ELK-----------RL-----RRPNVRFHGFV 61 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHS--TTEEEEEECESS---HHC-----------CH-----HHCTEEEE-S-
T ss_pred cccccccccccccccccchhhhHHHHHHHHC--cCEEEEEEeCCHH--HHH-----------Hh-----cCCCEEEcCCH
Confidence 367999999999999999999 999997544 45554 7788653 111 11 23589999998
Q ss_pred CCCCHHHHHHHhhcCCcEEEecCC-CCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHH
Q 002660 391 KQSDVPEIYRLAAKTKGVFINPAF-IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLV 469 (895)
Q Consensus 391 ~~~el~~ly~~A~~~~dv~v~ps~-~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll 469 (895)
+++.++|+.| |+++.|+. .++++.+++|||++|+|||+++. +..+++...+.|+++ ++|+++++++|.+++
T Consensus 62 --~e~~~~l~~~----dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~~i~~l~ 133 (135)
T PF13692_consen 62 --EELPEILAAA----DVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-ANDPEELAEAIERLL 133 (135)
T ss_dssp --HHHHHHHHC-----SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT-HHHHHHHHHHHH
T ss_pred --HHHHHHHHhC----CEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCCHHHHHHHHHHHh
Confidence 5899999999 99999985 67899999999999999999998 566777656777777 889999999999998
Q ss_pred hC
Q 002660 470 AD 471 (895)
Q Consensus 470 ~~ 471 (895)
+|
T Consensus 134 ~d 135 (135)
T PF13692_consen 134 ND 135 (135)
T ss_dssp H-
T ss_pred cC
Confidence 75
No 136
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.42 E-value=2e-10 Score=125.97 Aligned_cols=335 Identities=15% Similarity=0.139 Sum_probs=203.7
Q ss_pred CCCCchhHHHHHHHHHHhcCCCeeE-EEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCc
Q 002660 26 SDTGGQVKYVVELARALGSMPGVYR-VDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDK 104 (895)
Q Consensus 26 ~~~GG~~~~v~~La~~L~~~G~~h~-V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~ 104 (895)
.-|||+..-...++++|.++| ++ |.++-.... .++.+ ....++.+..++.++.++
T Consensus 8 gGTGGHv~pAlAl~~~l~~~g--~~~v~~~~~~~~----------~e~~l------------~~~~~~~~~~I~~~~~~~ 63 (357)
T COG0707 8 GGTGGHVFPALALAEELAKRG--WEQVIVLGTGDG----------LEAFL------------VKQYGIEFELIPSGGLRR 63 (357)
T ss_pred CCCccchhHHHHHHHHHHhhC--ccEEEEeccccc----------ceeee------------ccccCceEEEEecccccc
Confidence 358999999999999999999 84 555522110 01111 112377888888765532
Q ss_pred ccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHH
Q 002660 105 YIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQ 184 (895)
Q Consensus 105 ~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~ 184 (895)
+. .+..+... ..++..+.+..+.+.+ ++||+|.+........+...++.+++|++++..+..+-..
T Consensus 64 ~~----~~~~~~~~-~~~~~~~~~a~~il~~-------~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~~G~a-- 129 (357)
T COG0707 64 KG----SLKLLKAP-FKLLKGVLQARKILKK-------LKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAVPGLA-- 129 (357)
T ss_pred cC----cHHHHHHH-HHHHHHHHHHHHHHHH-------cCCCEEEecCCccccHHHHHHHhCCCCEEEEecCCCcchh--
Confidence 22 22211111 1222223333333444 8899999988777777788888999999998888744321
Q ss_pred HHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEE
Q 002660 185 LLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMA 264 (895)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~ 264 (895)
++ +..+.|+.|.+.-.. .. . +.+.+++.
T Consensus 130 -------------------nk-----~~~~~a~~V~~~f~~-~~----~-----------------------~~~~~~~~ 157 (357)
T COG0707 130 -------------------NK-----ILSKFAKKVASAFPK-LE----A-----------------------GVKPENVV 157 (357)
T ss_pred -------------------HH-----HhHHhhceeeecccc-cc----c-----------------------cCCCCceE
Confidence 11 134556666665542 11 0 11112677
Q ss_pred EeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHH-HhcccccC
Q 002660 265 IIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAF-GECRPLRE 343 (895)
Q Consensus 265 vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~-~~l~~~~~ 343 (895)
+..+.|..+.+. .... ..+.. ...++++|+.+|.=-..+.+..++... ..+. .
T Consensus 158 ~tG~Pvr~~~~~-~~~~---------------------~~~~~-~~~~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~---~ 211 (357)
T COG0707 158 VTGIPVRPEFEE-LPAA---------------------EVRKD-GRLDKKTILVTGGSQGAKALNDLVPEALAKLA---N 211 (357)
T ss_pred EecCcccHHhhc-cchh---------------------hhhhh-ccCCCcEEEEECCcchhHHHHHHHHHHHHHhh---h
Confidence 888877766554 1100 00011 112677777776533333344444333 3332 2
Q ss_pred CCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHH
Q 002660 344 LANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLI 423 (895)
Q Consensus 344 ~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~ 423 (895)
...+...+|... ..++......++. +.+.++ .++|.++|+.| |++|.= +-++++.
T Consensus 212 ~~~v~~~~G~~~------------~~~~~~~~~~~~~---~~v~~f--~~dm~~~~~~A----DLvIsR----aGa~Ti~ 266 (357)
T COG0707 212 RIQVIHQTGKND------------LEELKSAYNELGV---VRVLPF--IDDMAALLAAA----DLVISR----AGALTIA 266 (357)
T ss_pred CeEEEEEcCcch------------HHHHHHHHhhcCc---EEEeeH--HhhHHHHHHhc----cEEEeC----CcccHHH
Confidence 233333445442 2444455555554 666777 57899999999 998855 4679999
Q ss_pred HHHHcCCCEEEcCCCCc--------hhccccCCCeEEeCCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHH
Q 002660 424 EAAAHGLPIVATKNGGP--------VDIHRVLDNGLLVDPHD--QQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPE 493 (895)
Q Consensus 424 Ea~a~G~PVvas~~gg~--------~eiv~~~~~g~lv~p~d--~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~ 493 (895)
|..++|+|.|--..+.. ...+++.+.|+++...+ ++.+.+.|.+++.+++..++|..++++....-..+.
T Consensus 267 E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~~~~l~~m~~~a~~~~~p~aa~~ 346 (357)
T COG0707 267 ELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLLSNPEKLKAMAENAKKLGKPDAAER 346 (357)
T ss_pred HHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHH
Confidence 99999999998664332 23445566777776555 889999999999999999999998887765555555
Q ss_pred HHHHHHHH
Q 002660 494 HCKTYLSR 501 (895)
Q Consensus 494 ~a~~~~~~ 501 (895)
+++..+..
T Consensus 347 i~~~~~~~ 354 (357)
T COG0707 347 IADLLLAL 354 (357)
T ss_pred HHHHHHHH
Confidence 55554443
No 137
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.40 E-value=1.8e-10 Score=127.89 Aligned_cols=310 Identities=10% Similarity=0.097 Sum_probs=178.0
Q ss_pred CCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCcc
Q 002660 26 SDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKY 105 (895)
Q Consensus 26 ~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~~ 105 (895)
.-|||+..-.+.++++|.++| |+|.++++...- ..+.+ ...|..+..++..+.
T Consensus 9 GGTGGHi~Pala~a~~l~~~g--~~v~~vg~~~~~---------e~~l~-------------~~~g~~~~~~~~~~l--- 61 (352)
T PRK12446 9 GGSAGHVTPNLAIIPYLKEDN--WDISYIGSHQGI---------EKTII-------------EKENIPYYSISSGKL--- 61 (352)
T ss_pred CCcHHHHHHHHHHHHHHHhCC--CEEEEEECCCcc---------ccccC-------------cccCCcEEEEeccCc---
Confidence 469999999999999999998 999999865321 01111 012566666654332
Q ss_pred cccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHH
Q 002660 106 IAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQL 185 (895)
Q Consensus 106 ~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~ 185 (895)
++...|..+ .+...++....+..+.+++ .+||+||++.-..+..+...++.+++|+++.-.+..+-.
T Consensus 62 -~~~~~~~~~-~~~~~~~~~~~~~~~i~~~-------~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~~~g~---- 128 (352)
T PRK12446 62 -RRYFDLKNI-KDPFLVMKGVMDAYVRIRK-------LKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMTPGL---- 128 (352)
T ss_pred -CCCchHHHH-HHHHHHHHHHHHHHHHHHh-------cCCCEEEecCchhhHHHHHHHHHcCCCEEEECCCCCccH----
Confidence 111111111 1222222222222233333 889999998766666677888889999987665543211
Q ss_pred HHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEE
Q 002660 186 LKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAI 265 (895)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~v 265 (895)
..+ ...+.++.|++.-+.... . ++. +++.+
T Consensus 129 -----------------~nr-----~~~~~a~~v~~~f~~~~~----~---~~~---------------------~k~~~ 158 (352)
T PRK12446 129 -----------------ANK-----IALRFASKIFVTFEEAAK----H---LPK---------------------EKVIY 158 (352)
T ss_pred -----------------HHH-----HHHHhhCEEEEEccchhh----h---CCC---------------------CCeEE
Confidence 111 246678888876542111 1 111 26777
Q ss_pred eCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCC
Q 002660 266 IPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITT-LVKAFGECRPLREL 344 (895)
Q Consensus 266 ip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~-ll~A~~~l~~~~~~ 344 (895)
..+.|..+...... ...++.++..+++++||.+|.=...+.+.. +.+++..+. ..
T Consensus 159 tG~Pvr~~~~~~~~---------------------~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~---~~ 214 (352)
T PRK12446 159 TGSPVREEVLKGNR---------------------EKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELL---LK 214 (352)
T ss_pred ECCcCCcccccccc---------------------hHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHHHhhc---cC
Confidence 77777654332110 112233444567777777765444555533 334444442 22
Q ss_pred CcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHH
Q 002660 345 ANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIE 424 (895)
Q Consensus 345 ~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~E 424 (895)
.++++++|... .+ +.. ... .++...+++ .++++++|+.| |++|.- +-+.++.|
T Consensus 215 ~~vv~~~G~~~-~~-----------~~~---~~~---~~~~~~~f~-~~~m~~~~~~a----dlvIsr----~G~~t~~E 267 (352)
T PRK12446 215 YQIVHLCGKGN-LD-----------DSL---QNK---EGYRQFEYV-HGELPDILAIT----DFVISR----AGSNAIFE 267 (352)
T ss_pred cEEEEEeCCch-HH-----------HHH---hhc---CCcEEecch-hhhHHHHHHhC----CEEEEC----CChhHHHH
Confidence 44544566542 11 111 111 122333542 25899999999 988755 47789999
Q ss_pred HHHcCCCEEEcCCC-----C----chhccccCCCeEEeCCC--CHHHHHHHHHHHHhCHHHHH
Q 002660 425 AAAHGLPIVATKNG-----G----PVDIHRVLDNGLLVDPH--DQQSVADALLKLVADKQLWA 476 (895)
Q Consensus 425 a~a~G~PVvas~~g-----g----~~eiv~~~~~g~lv~p~--d~~~la~ai~~ll~~~~~~~ 476 (895)
++++|+|.|.-... + ..+.+.+.+.|..+... +++.+.++|.++++|++.++
T Consensus 268 ~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~~~~~~~ 330 (352)
T PRK12446 268 FLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELSHNNEKYK 330 (352)
T ss_pred HHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHcCHHHHH
Confidence 99999999987542 1 11233444556665432 57899999999998887643
No 138
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=99.38 E-value=2.6e-12 Score=127.82 Aligned_cols=169 Identities=20% Similarity=0.222 Sum_probs=87.5
Q ss_pred CCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCcc
Q 002660 26 SDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKY 105 (895)
Q Consensus 26 ~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~~ 105 (895)
+..||+++++.+|+++|+++| |+|+|+|....++... .........+....
T Consensus 9 ~~~GG~e~~~~~l~~~l~~~G--~~v~v~~~~~~~~~~~------------------------~~~~~~~~~~~~~~--- 59 (177)
T PF13439_consen 9 PNIGGAERVVLNLARALAKRG--HEVTVVSPGVKDPIEE------------------------ELVKIFVKIPYPIR--- 59 (177)
T ss_dssp TSSSHHHHHHHHHHHHHHHTT---EEEEEESS-TTS-SS------------------------TEEEE---TT-SST---
T ss_pred CCCChHHHHHHHHHHHHHHCC--CEEEEEEcCCCccchh------------------------hccceeeeeecccc---
Confidence 679999999999999999999 9999998865432210 00111111111111
Q ss_pred cccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHH
Q 002660 106 IAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQL 185 (895)
Q Consensus 106 ~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~ 185 (895)
. ...........+...+++ .+|||||+|.+.....+..... ++|+|++.|+.+... .
T Consensus 60 --~--~~~~~~~~~~~~~~~i~~--------------~~~DiVh~~~~~~~~~~~~~~~--~~~~v~~~H~~~~~~---~ 116 (177)
T PF13439_consen 60 --K--RFLRSFFFMRRLRRLIKK--------------EKPDIVHIHGPPAFWIALLACR--KVPIVYTIHGPYFER---R 116 (177)
T ss_dssp --S--S--HHHHHHHHHHHHHHH--------------HT-SEEECCTTHCCCHHHHHHH--CSCEEEEE-HHH--H---H
T ss_pred --c--ccchhHHHHHHHHHHHHH--------------cCCCeEEecccchhHHHHHhcc--CCCEEEEeCCCcccc---c
Confidence 0 001111122222223322 5799999999744444433333 999999999876320 0
Q ss_pred HHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEE
Q 002660 186 LKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAI 265 (895)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~v 265 (895)
..... .. ....+..++ +....+.+|.++++|+...+++.+ ++ .+..++.|
T Consensus 117 ~~~~~-~~----~~~~~~~~~--~~~~~~~~~~ii~vS~~~~~~l~~-~~----------------------~~~~ki~v 166 (177)
T PF13439_consen 117 FLKSK-LS----PYSYLNFRI--ERKLYKKADRIIAVSESTKDELIK-FG----------------------IPPEKIHV 166 (177)
T ss_dssp TTTTS-CC----CHHHHHHCT--THHHHCCSSEEEESSHHHHHHHHH-HT------------------------SS-EEE
T ss_pred ccccc-cc----hhhhhhhhh--hhhHHhcCCEEEEECHHHHHHHHH-hC----------------------CcccCCEE
Confidence 00000 00 000011111 333478999999999988888766 43 22238999
Q ss_pred eCCCCCCCCCC
Q 002660 266 IPPGMEFHHIV 276 (895)
Q Consensus 266 ip~Gid~~~f~ 276 (895)
||||||.+.|.
T Consensus 167 I~ngid~~~F~ 177 (177)
T PF13439_consen 167 IYNGIDTDRFR 177 (177)
T ss_dssp ----B-CCCH-
T ss_pred EECCccHHHcC
Confidence 99999999873
No 139
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=99.37 E-value=1.3e-12 Score=127.53 Aligned_cols=160 Identities=28% Similarity=0.383 Sum_probs=88.0
Q ss_pred CchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCccccc
Q 002660 29 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAK 108 (895)
Q Consensus 29 GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~~~~~ 108 (895)
||+++++.+|+++|+++| |+|+|+|+...... ... ...++.+.++|..+. .....
T Consensus 1 GG~~~~~~~l~~~L~~~G--~~V~v~~~~~~~~~-------~~~---------------~~~~~~~~~~~~~~~-~~~~~ 55 (160)
T PF13579_consen 1 GGIERYVRELARALAARG--HEVTVVTPQPDPED-------DEE---------------EEDGVRVHRLPLPRR-PWPLR 55 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT---EEEEEEE---GGG--------SE---------------EETTEEEEEE--S-S-SSGGG
T ss_pred CCHHHHHHHHHHHHHHCC--CEEEEEecCCCCcc-------ccc---------------ccCCceEEeccCCcc-chhhh
Confidence 899999999999999999 99999997643211 000 124899999987654 11000
Q ss_pred ccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHH
Q 002660 109 ELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQ 188 (895)
Q Consensus 109 ~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~ 188 (895)
.+ .+...+.+++.. +..+||+||+|++..++++..+++..++|+|++.|+...... .
T Consensus 56 --~~----~~~~~~~~~l~~------------~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~-----~ 112 (160)
T PF13579_consen 56 --LL----RFLRRLRRLLAA------------RRERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLFRRG-----S 112 (160)
T ss_dssp --HC----CHHHHHHHHCHH------------CT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T----------
T ss_pred --hH----HHHHHHHHHHhh------------hccCCeEEEecccchhHHHHHHHHccCCcEEEEECCCchhhc-----c
Confidence 11 122222222200 127899999999766666766665789999999998643221 0
Q ss_pred hhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCC
Q 002660 189 ARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPP 268 (895)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~ 268 (895)
....++.+++ |+..++.||.|+++|+...+.+.+ +. .++ +++.||||
T Consensus 113 --------~~~~~~~~~~--~~~~~~~ad~vi~~S~~~~~~l~~-~g-~~~---------------------~ri~vipn 159 (160)
T PF13579_consen 113 --------RWKRRLYRWL--ERRLLRRADRVIVVSEAMRRYLRR-YG-VPP---------------------DRIHVIPN 159 (160)
T ss_dssp ---------HHHHHHHHH--HHHHHHH-SEEEESSHHHHHHHHH-H----G---------------------GGEEE---
T ss_pred --------chhhHHHHHH--HHHHHhcCCEEEECCHHHHHHHHH-hC-CCC---------------------CcEEEeCc
Confidence 0011122333 677899999999999988887765 32 233 39999999
Q ss_pred C
Q 002660 269 G 269 (895)
Q Consensus 269 G 269 (895)
|
T Consensus 160 G 160 (160)
T PF13579_consen 160 G 160 (160)
T ss_dssp -
T ss_pred C
Confidence 8
No 140
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=99.29 E-value=1.5e-11 Score=108.56 Aligned_cols=91 Identities=18% Similarity=0.333 Sum_probs=85.7
Q ss_pred EEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-
Q 002660 408 VFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI- 486 (895)
Q Consensus 408 v~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~- 486 (895)
++++|+..+++++.++|+||||+|+|++..++..+++.++..+++++ |++++.++|..++++|++++++++++++.+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~~~~~~~~ia~~a~~~v~ 78 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLLENPEERRRIAKNARERVL 78 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence 46889999999999999999999999999999999999888899998 999999999999999999999999999999
Q ss_pred hcCCHHHHHHHHHH
Q 002660 487 HLFSWPEHCKTYLS 500 (895)
Q Consensus 487 ~~~s~~~~a~~~~~ 500 (895)
++|+|++.++++++
T Consensus 79 ~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 79 KRHTWEHRAEQILE 92 (92)
T ss_pred HhCCHHHHHHHHHC
Confidence 59999999999874
No 141
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.25 E-value=1.1e-10 Score=112.65 Aligned_cols=252 Identities=14% Similarity=0.137 Sum_probs=144.0
Q ss_pred cCeEEEEEecCCCC--cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeec
Q 002660 611 RKHIFVISVDCDST--TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 688 (895)
Q Consensus 611 ~~kli~~DiDGTL~--~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~ 688 (895)
..++||+|+||||. ....+.....+..|++. |+.|++||..+..++..+-+.+++. +-.+|+.||+.||-+
T Consensus 6 ~~~lIFtDlD~TLl~~~ye~~pA~pv~~el~d~----G~~Vi~~SSKT~aE~~~l~~~l~v~---~~p~iaEnG~aI~~p 78 (274)
T COG3769 6 MPLLIFTDLDGTLLPHSYEWQPAAPVLLELKDA----GVPVILCSSKTRAEMLYLQKSLGVQ---GLPLIAENGAAIYLP 78 (274)
T ss_pred cceEEEEcccCcccCCCCCCCccchHHHHHHHc----CCeEEEeccchHHHHHHHHHhcCCC---CCceeecCCceEEec
Confidence 45799999999994 34445566777888887 6999999999999999999999984 346999999999976
Q ss_pred cCCCCCCCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccC-C---cccccccc------cCCceEEEEEeeCC
Q 002660 689 TLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESG-E---KVLTPAEQ------LSTNYCYAFSVQKP 758 (895)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~------~~~~~k~~~~~~~~ 758 (895)
..+-..........-..++.-...-+.+++.+..+...+........ . ..++-... ....+..+.+..+.
T Consensus 79 ~~~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~~rEyseti~~rs~ 158 (274)
T COG3769 79 KGWFPFDGKPREISGISHIELGKVLEKIREKLDKLEEHFGFTTFDDVDDEEIAEWTGLPREQAALAMLREYSETIIWRSS 158 (274)
T ss_pred ccccccCCCCceecceEeeehhhhHHHHHHHHHHHHHHhCeeEeccCCHHHHHHHhCCChHHhHHHHHHHhhhheeeccc
Confidence 54321000000000000000011112233333222211110000000 0 00000000 01122222222222
Q ss_pred CCCccHHHHHHHHHhccCeEEEEEecCCeeEEeecCCCChHHHHHHHHHHh-CCCccc-EEEEecCCCCCCccccccCcc
Q 002660 759 GMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRW-GVELSK-MVVFVGESGDTDYEGLLGGVH 836 (895)
Q Consensus 759 ~~~~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~~-gi~~~~-viaf~Gd~nn~D~~eMl~~ag 836 (895)
+ .....+...|...+ +++.++..+.-+.-....||.|++.+++.+ -.+... +++ .||+.| | .+||+...
T Consensus 159 d--~~~~~~~~~L~e~g----lt~v~garf~~v~~as~gKg~Aa~~ll~~y~rl~~~r~t~~-~GDg~n-D-~Pl~ev~d 229 (274)
T COG3769 159 D--ERMAQFTARLNERG----LTFVHGARFWHVLDASAGKGQAANWLLETYRRLGGARTTLG-LGDGPN-D-APLLEVMD 229 (274)
T ss_pred c--hHHHHHHHHHHhcC----ceEEeccceEEEeccccCccHHHHHHHHHHHhcCceeEEEe-cCCCCC-c-ccHHHhhh
Confidence 2 22335566666544 344455457788888889999999998775 345555 555 888888 8 99999999
Q ss_pred eEEEecCccccccccccccCCCCCCCCCcCCCCceEEccCcCChHHHHHHHHHhC
Q 002660 837 KTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLG 891 (895)
Q Consensus 837 ~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dGI~~al~~~~ 891 (895)
..+.++|-.-+- ....++ -+....++..-.-+|..+.|+||.
T Consensus 230 ~AfiV~~lnre~-~~lv~~------------i~~vv~~~~~~~~~~~~e~~~~~~ 271 (274)
T COG3769 230 YAFIVKGLNREG-VHLVSS------------IPAVVERIQREGPEGWREGLDHFF 271 (274)
T ss_pred hheeecccchhh-hhcccc------------chhheeeccccCchHHHHHhhhhc
Confidence 999999766111 011111 133344556667789999999874
No 142
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=99.23 E-value=8.9e-10 Score=108.09 Aligned_cols=182 Identities=16% Similarity=0.106 Sum_probs=115.1
Q ss_pred ceeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcc
Q 002660 3 FNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDF 82 (895)
Q Consensus 3 ~m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~ 82 (895)
|.||++|...|. ++..||.|+.+.+|+..|+++| |+|+|.|+....+.. .
T Consensus 1 mkkIaIiGtrGI----------Pa~YGGfET~ve~L~~~l~~~g--~~v~Vyc~~~~~~~~-------~----------- 50 (185)
T PF09314_consen 1 MKKIAIIGTRGI----------PARYGGFETFVEELAPRLVSKG--IDVTVYCRSDYYPYK-------E----------- 50 (185)
T ss_pred CceEEEEeCCCC----------CcccCcHHHHHHHHHHHHhcCC--ceEEEEEccCCCCCC-------C-----------
Confidence 458999998887 4678999999999999999999 999999986432211 1
Q ss_pred cccCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEecccc-chhHHHH
Q 002660 83 MDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYAD-AGDSAAL 161 (895)
Q Consensus 83 ~~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~-~~~~~~~ 161 (895)
..-.|++++.+|.... .. +..+...+.... .++... ...+.+.||||.+... .+++..+
T Consensus 51 ----~~y~gv~l~~i~~~~~-g~---------~~si~yd~~sl~----~al~~~--~~~~~~~~ii~ilg~~~g~~~~~~ 110 (185)
T PF09314_consen 51 ----FEYNGVRLVYIPAPKN-GS---------AESIIYDFLSLL----HALRFI--KQDKIKYDIILILGYGIGPFFLPF 110 (185)
T ss_pred ----cccCCeEEEEeCCCCC-Cc---------hHHHHHHHHHHH----HHHHHH--hhccccCCEEEEEcCCccHHHHHH
Confidence 1125999999986433 11 122222111111 111000 0012468899999875 3444444
Q ss_pred Hhc--cCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCCh
Q 002660 162 LSG--ALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDP 239 (895)
Q Consensus 162 ~~~--~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~ 239 (895)
+.+ ..|.|++++.|++.... -+.+.+ ... +++ ..|+.+.+.||.+|+-|+...+.+...|..
T Consensus 111 ~r~~~~~g~~v~vN~DGlEWkR----~KW~~~----~k~---~lk--~~E~~avk~ad~lIaDs~~I~~y~~~~y~~--- 174 (185)
T PF09314_consen 111 LRKLRKKGGKVVVNMDGLEWKR----AKWGRP----AKK---YLK--FSEKLAVKYADRLIADSKGIQDYIKERYGR--- 174 (185)
T ss_pred HHhhhhcCCcEEECCCcchhhh----hhcCHH----HHH---HHH--HHHHHHHHhCCEEEEcCHHHHHHHHHHcCC---
Confidence 443 34779999999984422 111111 111 112 258889999999999999777766666641
Q ss_pred HHHHHHHHhHhccccccCCCCCCEEEeCCCCC
Q 002660 240 VLERKLRARIKRNVSCYGKFMPRMAIIPPGME 271 (895)
Q Consensus 240 ~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid 271 (895)
.+..+||+|.|
T Consensus 175 ---------------------~~s~~IaYGad 185 (185)
T PF09314_consen 175 ---------------------KKSTFIAYGAD 185 (185)
T ss_pred ---------------------CCcEEecCCCC
Confidence 17899999986
No 143
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=99.11 E-value=8.6e-09 Score=117.51 Aligned_cols=127 Identities=18% Similarity=0.085 Sum_probs=86.3
Q ss_pred CCCcEEEEEeCCCC---CCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeC
Q 002660 311 PRKPVILALARPDP---KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYP 387 (895)
Q Consensus 311 ~~~~~il~vgrl~~---~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~ 387 (895)
...+++++.|+... .+-...+++|+..+ ...+.+.+|...... ....++|.+.
T Consensus 238 ~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~-----~~~~i~~~g~~~~~~-------------------~~~~~~v~~~ 293 (401)
T cd03784 238 GRPPVYVGFGSMVVRDPEALARLDVEAVATL-----GQRAILSLGWGGLGA-------------------EDLPDNVRVV 293 (401)
T ss_pred CCCcEEEeCCCCcccCHHHHHHHHHHHHHHc-----CCeEEEEccCccccc-------------------cCCCCceEEe
Confidence 45667888888754 23445566666654 123434555543210 2345789999
Q ss_pred CCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCc----hhccccCCCeEEeCCC--CHHHH
Q 002660 388 KHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP----VDIHRVLDNGLLVDPH--DQQSV 461 (895)
Q Consensus 388 g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~----~eiv~~~~~g~lv~p~--d~~~l 461 (895)
+++| ...+|..| |++|.- |-..++.||+++|+|+|.....+- ...+...+.|+.+++. +.+++
T Consensus 294 ~~~p---~~~ll~~~----d~~I~h----gG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~~l 362 (401)
T cd03784 294 DFVP---HDWLLPRC----AAVVHH----GGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAERL 362 (401)
T ss_pred CCCC---HHHHhhhh----heeeec----CCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHHHH
Confidence 9975 45678889 999843 445899999999999999876552 3344555677777665 68999
Q ss_pred HHHHHHHHhCH
Q 002660 462 ADALLKLVADK 472 (895)
Q Consensus 462 a~ai~~ll~~~ 472 (895)
+++|.++++++
T Consensus 363 ~~al~~~l~~~ 373 (401)
T cd03784 363 AAALRRLLDPP 373 (401)
T ss_pred HHHHHHHhCHH
Confidence 99999999853
No 144
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=99.11 E-value=1.3e-08 Score=114.95 Aligned_cols=195 Identities=15% Similarity=0.187 Sum_probs=138.2
Q ss_pred hcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 002660 213 LDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDN 292 (895)
Q Consensus 213 l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~ 292 (895)
....|.||++|+++.+.+...++.. .++.++|-|+=+. +.. .
T Consensus 237 ~~~~~~iIv~T~~q~~di~~r~~~~-----------------------~~~~~ip~g~i~~-~~~-~------------- 278 (438)
T TIGR02919 237 ETRNKKIIIPNKNEYEKIKELLDNE-----------------------YQEQISQLGYLYP-FKK-D------------- 278 (438)
T ss_pred ccccCeEEeCCHHHHHHHHHHhCcc-----------------------cCceEEEEEEEEe-ecc-c-------------
Confidence 3688999999988777776665431 1677888886522 110 0
Q ss_pred CCCCCCchhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHH
Q 002660 293 PASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVL 372 (895)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~ 372 (895)
....+-+++++. ...|++++.+.+ ..|++.+=+|.+.+. ..+|.
T Consensus 279 -----------------~r~~~~~l~~t~-------s~~I~~i~~Lv~--~lPd~~f~Iga~te~----------s~kL~ 322 (438)
T TIGR02919 279 -----------------NKYRKQALILTN-------SDQIEHLEEIVQ--ALPDYHFHIAALTEM----------SSKLM 322 (438)
T ss_pred -----------------cCCcccEEEECC-------HHHHHHHHHHHH--hCCCcEEEEEecCcc----------cHHHH
Confidence 112334555551 889999998864 445666533666531 14555
Q ss_pred HHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCC-CCchhccccCCCeE
Q 002660 373 KLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN-GGPVDIHRVLDNGL 451 (895)
Q Consensus 373 ~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~-gg~~eiv~~~~~g~ 451 (895)
++ .++ ...+.|++.. ..++.++|..| |+++.++..|++++++.||+..|+||++.+. -|..+++.+ |.
T Consensus 323 ~L-~~y--~nvvly~~~~-~~~l~~ly~~~----dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~ 391 (438)
T TIGR02919 323 SL-DKY--DNVKLYPNIT-TQKIQELYQTC----DIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---EN 391 (438)
T ss_pred HH-Hhc--CCcEEECCcC-hHHHHHHHHhc----cEEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---Cc
Confidence 55 555 3445555554 45899999999 9999999999999999999999999999874 355677654 88
Q ss_pred EeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHH
Q 002660 452 LVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWP 492 (895)
Q Consensus 452 lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~ 492 (895)
+++.+++++|+++|.++|++++.+++.-..-++.+..-+.+
T Consensus 392 l~~~~~~~~m~~~i~~lL~d~~~~~~~~~~q~~~a~~~~~~ 432 (438)
T TIGR02919 392 IFEHNEVDQLISKLKDLLNDPNQFRELLEQQREHANDISKE 432 (438)
T ss_pred eecCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHhccCCHH
Confidence 99999999999999999999988777655555555444443
No 145
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.06 E-value=4.8e-10 Score=108.89 Aligned_cols=73 Identities=12% Similarity=0.058 Sum_probs=60.1
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEecCccccccccccccCCCCCCCCCcCCCCceEEccC
Q 002660 797 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPE 876 (895)
Q Consensus 797 sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~ 876 (895)
+|..+++.+++++|++++++++ +||+.| | ++|++.+|++++|.|+. +.. ++.++++++
T Consensus 76 ~k~~~~~~~~~~~~~~~~~~~~-vGDs~~-D-~~~~~~ag~~~~v~~~~--~~~-----------------~~~a~~i~~ 133 (154)
T TIGR01670 76 NKLIAFSDILEKLALAPENVAY-IGDDLI-D-WPVMEKVGLSVAVADAH--PLL-----------------IPRADYVTR 133 (154)
T ss_pred chHHHHHHHHHHcCCCHHHEEE-ECCCHH-H-HHHHHHCCCeEecCCcC--HHH-----------------HHhCCEEec
Confidence 4788999999999999999888 888888 8 99999999999999998 322 334456888
Q ss_pred cCChHH-HHHHHHHhC
Q 002660 877 DCTTSD-IRSSLEQLG 891 (895)
Q Consensus 877 ~~~~dG-I~~al~~~~ 891 (895)
+...+| +.++++++-
T Consensus 134 ~~~~~g~~~~~~~~~~ 149 (154)
T TIGR01670 134 IAGGRGAVREVCELLL 149 (154)
T ss_pred CCCCCcHHHHHHHHHH
Confidence 887555 999998763
No 146
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.05 E-value=9.4e-10 Score=119.24 Aligned_cols=71 Identities=13% Similarity=0.163 Sum_probs=60.8
Q ss_pred CCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEecCccccccccccccCCCCCCCCCcCCCCceEEc
Q 002660 795 LASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQT 874 (895)
Q Consensus 795 g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v 874 (895)
+..|+.+++.+++++|++++++++ +||+.| | ++|++.||+|||| ||. +.+++.|+. +
T Consensus 246 ~k~K~~~L~~la~~lgi~~~qtIa-VGDg~N-D-l~m~~~AGlgiA~-nAk--p~Vk~~Ad~-----------------~ 302 (322)
T PRK11133 246 AQYKADTLTRLAQEYEIPLAQTVA-IGDGAN-D-LPMIKAAGLGIAY-HAK--PKVNEQAQV-----------------T 302 (322)
T ss_pred cccHHHHHHHHHHHcCCChhhEEE-EECCHH-H-HHHHHHCCCeEEe-CCC--HHHHhhCCE-----------------E
Confidence 358999999999999999999999 666667 7 9999999999999 998 555556555 8
Q ss_pred cCcCChHHHHHHHH
Q 002660 875 PEDCTTSDIRSSLE 888 (895)
Q Consensus 875 t~~~~~dGI~~al~ 888 (895)
+...+-|||.+-|-
T Consensus 303 i~~~~l~~~l~~~~ 316 (322)
T PRK11133 303 IRHADLMGVLCILS 316 (322)
T ss_pred ecCcCHHHHHHHhc
Confidence 88899999988763
No 147
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=99.01 E-value=1.5e-07 Score=106.15 Aligned_cols=152 Identities=17% Similarity=0.263 Sum_probs=96.5
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEE--EEecCCCccccccchHHHHHHHHHHHHhcCCCC--------------cEEeC
Q 002660 324 PKKNITTLVKAFGECRPLRELANLTL--IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYG--------------QVAYP 387 (895)
Q Consensus 324 ~~Kgi~~ll~A~~~l~~~~~~~~l~l--ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~--------------~v~~~ 387 (895)
..++++.++++++.+.+. +++.+ .+.+..+. ..+.+.+...++.. .+.+.
T Consensus 219 ~~~~lp~~l~al~~L~~~---~~~~~v~~~~~~~~~-----------~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~ 284 (396)
T TIGR03492 219 AYRNLKLLLRALEALPDS---QPFVFLAAIVPSLSL-----------EKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVL 284 (396)
T ss_pred HHccHHHHHHHHHHHhhC---CCeEEEEEeCCCCCH-----------HHHHHHHHhcCceecCCccccchhhccCceEEE
Confidence 446788999999998532 44544 33233322 33334444434431 24443
Q ss_pred CCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCch---hcccc----CCCeEEeCCCCHHH
Q 002660 388 KHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPV---DIHRV----LDNGLLVDPHDQQS 460 (895)
Q Consensus 388 g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~---eiv~~----~~~g~lv~p~d~~~ 460 (895)
.+ ..++.++|+.| |++|..| |.+..|++++|+|+|.....+.. .+.+. ...++.+...+++.
T Consensus 285 ~~--~~~~~~~l~~A----DlvI~rS-----Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g~~~~l~~~~~~~ 353 (396)
T TIGR03492 285 LG--RGAFAEILHWA----DLGIAMA-----GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLGGSVFLASKNPEQ 353 (396)
T ss_pred ec--hHhHHHHHHhC----CEEEECc-----CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcCCEEecCCCCHHH
Confidence 33 46799999999 9998874 45559999999999998743321 12222 12445555667899
Q ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHH
Q 002660 461 VADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLS 500 (895)
Q Consensus 461 la~ai~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~ 500 (895)
+++++.++++|++.++++.+++++.. +....+.+++.+.+
T Consensus 354 l~~~l~~ll~d~~~~~~~~~~~~~~lg~~~a~~~ia~~i~~ 394 (396)
T TIGR03492 354 AAQVVRQLLADPELLERCRRNGQERMGPPGASARIAESILK 394 (396)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 99999999999988888775555555 34555555554443
No 148
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.99 E-value=9.7e-10 Score=107.50 Aligned_cols=69 Identities=9% Similarity=0.064 Sum_probs=56.2
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEecCccccccccccccCCCCCCCCCcCCCCceEEccC
Q 002660 797 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPE 876 (895)
Q Consensus 797 sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~ 876 (895)
.|-..++.+++++|++++++++ +||+.| | ++|++.+|+++||+||. .++|..|+ +||.
T Consensus 82 pkp~~~~~~~~~l~~~~~ev~~-iGD~~n-D-i~~~~~ag~~~am~nA~--~~lk~~A~-----------------~I~~ 139 (169)
T TIGR02726 82 KKTEPYAQMLEEMNISDAEVCY-VGDDLV-D-LSMMKRVGLAVAVGDAV--ADVKEAAA-----------------YVTT 139 (169)
T ss_pred CCHHHHHHHHHHcCcCHHHEEE-ECCCHH-H-HHHHHHCCCeEECcCch--HHHHHhCC-----------------EEcC
Confidence 4567899999999999999999 777777 8 99999999999999999 55555554 4888
Q ss_pred cCChHHHHHHH
Q 002660 877 DCTTSDIRSSL 887 (895)
Q Consensus 877 ~~~~dGI~~al 887 (895)
+..++|+...+
T Consensus 140 ~~~~~g~v~e~ 150 (169)
T TIGR02726 140 ARGGHGAVREV 150 (169)
T ss_pred CCCCCCHHHHH
Confidence 88888764443
No 149
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=98.92 E-value=6.5e-07 Score=101.68 Aligned_cols=112 Identities=21% Similarity=0.203 Sum_probs=76.2
Q ss_pred CCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCch----hccccCCCeEEeCC
Q 002660 380 LYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPV----DIHRVLDNGLLVDP 455 (895)
Q Consensus 380 l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~----eiv~~~~~g~lv~p 455 (895)
+.+++.+.+++|. .+++..| |++|..+ |. .++.||+++|+|+|+....+-. ..+...+.|..++.
T Consensus 273 ~~~~v~~~~~~p~---~~ll~~~----~~~I~hg---G~-~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~ 341 (392)
T TIGR01426 273 LPPNVEVRQWVPQ---LEILKKA----DAFITHG---GM-NSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLPP 341 (392)
T ss_pred CCCCeEEeCCCCH---HHHHhhC----CEEEECC---Cc-hHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEecc
Confidence 3468888899875 3788899 9988653 33 4789999999999997654433 23444566777754
Q ss_pred C--CHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Q 002660 456 H--DQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRI 502 (895)
Q Consensus 456 ~--d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~ 502 (895)
. +.++++++|.+++.+++.++++..-..+....-..+..++.+.+++
T Consensus 342 ~~~~~~~l~~ai~~~l~~~~~~~~~~~l~~~~~~~~~~~~aa~~i~~~~ 390 (392)
T TIGR01426 342 EEVTAEKLREAVLAVLSDPRYAERLRKMRAEIREAGGARRAADEIEGFL 390 (392)
T ss_pred ccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHhh
Confidence 3 5789999999999998755555433333333445566665555443
No 150
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.90 E-value=1.4e-06 Score=94.46 Aligned_cols=262 Identities=14% Similarity=0.180 Sum_probs=161.1
Q ss_pred CCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeC
Q 002660 143 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 222 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~ 222 (895)
++||++.......-.....-+++.|+|++..---+-...+. .|..... ..+..++..|.|++-
T Consensus 122 ~~P~l~Ii~EtElWPnli~e~~~~~~p~~LvNaRLS~rS~~---------------~y~k~~~--~~~~~~~~i~li~aQ 184 (419)
T COG1519 122 WRPKLLIIMETELWPNLINELKRRGIPLVLVNARLSDRSFA---------------RYAKLKF--LARLLFKNIDLILAQ 184 (419)
T ss_pred cCCCEEEEEeccccHHHHHHHHHcCCCEEEEeeeechhhhH---------------HHHHHHH--HHHHHHHhcceeeec
Confidence 77998776543222222344567799987643222111110 1111122 144568899999999
Q ss_pred ChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhH
Q 002660 223 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 302 (895)
Q Consensus 223 s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (895)
|+.+.+++...... ++.+.-| ........ ........
T Consensus 185 se~D~~Rf~~LGa~-------------------------~v~v~GN---lKfd~~~~---------------~~~~~~~~ 221 (419)
T COG1519 185 SEEDAQRFRSLGAK-------------------------PVVVTGN---LKFDIEPP---------------PQLAAELA 221 (419)
T ss_pred CHHHHHHHHhcCCc-------------------------ceEEecc---eeecCCCC---------------hhhHHHHH
Confidence 99888876553211 3455444 11111100 11222333
Q ss_pred HhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCC
Q 002660 303 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY 381 (895)
Q Consensus 303 ~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~ 381 (895)
..+.....+ ++++++.+.. ..--+..++++..+++ ..+++.+ +|...++ ....+.+++...|+.
T Consensus 222 ~~r~~l~~~-r~v~iaaSTH--~GEeei~l~~~~~l~~--~~~~~llIlVPRHpE----------Rf~~v~~l~~~~gl~ 286 (419)
T COG1519 222 ALRRQLGGH-RPVWVAASTH--EGEEEIILDAHQALKK--QFPNLLLILVPRHPE----------RFKAVENLLKRKGLS 286 (419)
T ss_pred HHHHhcCCC-CceEEEecCC--CchHHHHHHHHHHHHh--hCCCceEEEecCChh----------hHHHHHHHHHHcCCe
Confidence 444444333 8888888882 2223468899999974 4445544 5555442 356777888887763
Q ss_pred C-------------cEEeCCCCCCCCHHHHHHHhhcCCcEEEec-CCCCCCchHHHHHHHcCCCEEEcCC----CCchhc
Q 002660 382 G-------------QVAYPKHHKQSDVPEIYRLAAKTKGVFINP-AFIEPFGLTLIEAAAHGLPIVATKN----GGPVDI 443 (895)
Q Consensus 382 ~-------------~v~~~g~~~~~el~~ly~~A~~~~dv~v~p-s~~Eg~gl~~~Ea~a~G~PVvas~~----gg~~ei 443 (895)
- +|.+... .-||..+|+.| |++++- |+.+--|=-++|++++|+|||+-.. ..+.+-
T Consensus 287 ~~~rS~~~~~~~~tdV~l~Dt--mGEL~l~y~~a----diAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~ 360 (419)
T COG1519 287 VTRRSQGDPPFSDTDVLLGDT--MGELGLLYGIA----DIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAER 360 (419)
T ss_pred EEeecCCCCCCCCCcEEEEec--HhHHHHHHhhc----cEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHH
Confidence 1 2222222 23899999999 887766 6666556789999999999999542 333333
Q ss_pred cccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhh
Q 002660 444 HRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIH 487 (895)
Q Consensus 444 v~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~ 487 (895)
+...+.|+.|+ |.+.+++++..++.+++.++++++++...+.
T Consensus 361 l~~~ga~~~v~--~~~~l~~~v~~l~~~~~~r~~~~~~~~~~v~ 402 (419)
T COG1519 361 LLQAGAGLQVE--DADLLAKAVELLLADEDKREAYGRAGLEFLA 402 (419)
T ss_pred HHhcCCeEEEC--CHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 44556778887 6888999999999999999999999998884
No 151
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=98.84 E-value=4.4e-07 Score=101.38 Aligned_cols=263 Identities=16% Similarity=0.128 Sum_probs=148.8
Q ss_pred CCCcEEEecc-ccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEe
Q 002660 143 VWPVAIHGHY-ADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 221 (895)
Q Consensus 143 ~~pDvVh~h~-~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~ 221 (895)
.+||+|.++. ....+.+..++..++||+++..-+.... +. ..+ ..++. +-+.|+..++
T Consensus 92 ~~Pd~vlv~GD~~~~la~alaA~~~~IPv~HveaG~rs~--------~~-~eE-------~~r~~-----i~~la~l~f~ 150 (365)
T TIGR03568 92 LKPDLVVVLGDRFEMLAAAIAAALLNIPIAHIHGGEVTE--------GA-IDE-------SIRHA-----ITKLSHLHFV 150 (365)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHhCCcEEEEECCccCC--------CC-chH-------HHHHH-----HHHHHhhccC
Confidence 7899999987 5677788889999999988543332110 00 000 11111 2345677888
Q ss_pred CChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCch
Q 002660 222 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPP-GMEFHHIVPQDGDMDGETEGNEDNPASPDPPI 300 (895)
Q Consensus 222 ~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~-Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (895)
+++...+.+.+. |.+..++.++.| ++|.-...... ..
T Consensus 151 ~t~~~~~~L~~e-----------------------g~~~~~i~~tG~~~iD~l~~~~~~-------------------~~ 188 (365)
T TIGR03568 151 ATEEYRQRVIQM-----------------------GEDPDRVFNVGSPGLDNILSLDLL-------------------SK 188 (365)
T ss_pred CCHHHHHHHHHc-----------------------CCCCCcEEEECCcHHHHHHhhhcc-------------------CH
Confidence 887766655332 233336776654 55532221100 01
Q ss_pred hHHhhhhcCCCCCcEE-EEEeCCC--CC---CCHHHHHHHHHhcccccCCCcEEEEEecC-CCccccccchHHHHHHHHH
Q 002660 301 WSEIMRFFTNPRKPVI-LALARPD--PK---KNITTLVKAFGECRPLRELANLTLIMGNR-DGIDEMSSTSASVLLSVLK 373 (895)
Q Consensus 301 ~~~~~~~~~~~~~~~i-l~vgrl~--~~---Kgi~~ll~A~~~l~~~~~~~~l~livG~~-~~~~~~~~~~~~~~~~l~~ 373 (895)
.....+++.+++++++ +.+-+-. .. +.+..+++++..+ .. ++.++...+ +.. ..+...+..
T Consensus 189 ~~~~~~lgl~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~---~~--~~~vi~P~~~p~~-------~~i~~~i~~ 256 (365)
T TIGR03568 189 EELEEKLGIDLDKPYALVTFHPVTLEKESAEEQIKELLKALDEL---NK--NYIFTYPNADAGS-------RIINEAIEE 256 (365)
T ss_pred HHHHHHhCCCCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHh---cc--CCEEEEeCCCCCc-------hHHHHHHHH
Confidence 1223344444343443 4444322 22 3355555555544 21 233343222 211 122333433
Q ss_pred HHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEe
Q 002660 374 LIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLV 453 (895)
Q Consensus 374 ~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv 453 (895)
.... .+++.+.+.++..++..+++.| +++|-- +-|.. .||.+.|+|+|+- |.-+|.+..+.+.+++
T Consensus 257 ~~~~---~~~v~l~~~l~~~~~l~Ll~~a----~~vitd----SSggi-~EA~~lg~Pvv~l--~~R~e~~~~g~nvl~v 322 (365)
T TIGR03568 257 YVNE---HPNFRLFKSLGQERYLSLLKNA----DAVIGN----SSSGI-IEAPSFGVPTINI--GTRQKGRLRADSVIDV 322 (365)
T ss_pred HhcC---CCCEEEECCCChHHHHHHHHhC----CEEEEc----ChhHH-HhhhhcCCCEEee--cCCchhhhhcCeEEEe
Confidence 3211 4689999999999999999999 887732 22333 8999999999954 4566777677787878
Q ss_pred CCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHH
Q 002660 454 DPHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSR 501 (895)
Q Consensus 454 ~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~ 501 (895)
+.|++++.+++.+++ +++.++.+ ... ..|-..+-++++.+.
T Consensus 323 -g~~~~~I~~a~~~~~-~~~~~~~~-----~~~~~pygdg~as~rI~~~ 364 (365)
T TIGR03568 323 -DPDKEEIVKAIEKLL-DPAFKKSL-----KNVKNPYGDGNSSERIIEI 364 (365)
T ss_pred -CCCHHHHHHHHHHHh-ChHHHHHH-----hhCCCCCCCChHHHHHHHh
Confidence 568999999999954 44332322 222 346555556665543
No 152
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=98.83 E-value=2.9e-07 Score=101.35 Aligned_cols=119 Identities=18% Similarity=0.246 Sum_probs=79.0
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCC
Q 002660 311 PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHH 390 (895)
Q Consensus 311 ~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~ 390 (895)
+.+.+++++|..+.. .++++++.+. ...+. ++|.... . .-.++|.+.++.
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~~~----~~~~~-v~g~~~~--~-------------------~~~~ni~~~~~~ 240 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKALP----DYQFI-VFGPNAA--D-------------------PRPGNIHVRPFS 240 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHhCC----CCeEE-EEcCCcc--c-------------------ccCCCEEEeecC
Confidence 346689999988766 6677777663 34453 4465421 0 004678887763
Q ss_pred CCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchh------ccccCCCeEEeCCC--CHHHHH
Q 002660 391 KQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVD------IHRVLDNGLLVDPH--DQQSVA 462 (895)
Q Consensus 391 ~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~e------iv~~~~~g~lv~p~--d~~~la 462 (895)
..++.+++..| |++|..+ --.++.|++++|+|+|+-...+..| .++..+.|..+++. +++.++
T Consensus 241 -~~~~~~~m~~a----d~vIs~~----G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l~ 311 (318)
T PF13528_consen 241 -TPDFAELMAAA----DLVISKG----GYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERLA 311 (318)
T ss_pred -hHHHHHHHHhC----CEEEECC----CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHHH
Confidence 26899999999 9988652 2245999999999999977654333 23344556665543 568888
Q ss_pred HHHHHH
Q 002660 463 DALLKL 468 (895)
Q Consensus 463 ~ai~~l 468 (895)
++|.++
T Consensus 312 ~~l~~~ 317 (318)
T PF13528_consen 312 EFLERL 317 (318)
T ss_pred HHHhcC
Confidence 887653
No 153
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.82 E-value=5.5e-09 Score=104.62 Aligned_cols=70 Identities=9% Similarity=-0.023 Sum_probs=54.8
Q ss_pred hHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEecCccccccccccccCCCCCCCCCcCCCCceEEccCc
Q 002660 798 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPED 877 (895)
Q Consensus 798 Kg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~ 877 (895)
|..+++.+++++|++++++++ +||+.+ | ++|++.+|++++|+++. ...+.. ++|++..
T Consensus 97 k~~~l~~~~~~~gl~~~ev~~-VGDs~~-D-~~~a~~aG~~~~v~~~~--~~~~~~-----------------a~~v~~~ 154 (183)
T PRK09484 97 KLIAFSDLLEKLAIAPEQVAY-IGDDLI-D-WPVMEKVGLSVAVADAH--PLLLPR-----------------ADYVTRI 154 (183)
T ss_pred HHHHHHHHHHHhCCCHHHEEE-ECCCHH-H-HHHHHHCCCeEecCChh--HHHHHh-----------------CCEEecC
Confidence 568899999999999999988 777777 8 99999999999998776 322333 3458877
Q ss_pred CChHHHHHHHHH
Q 002660 878 CTTSDIRSSLEQ 889 (895)
Q Consensus 878 ~~~dGI~~al~~ 889 (895)
...+|....|.+
T Consensus 155 ~~g~g~~~el~~ 166 (183)
T PRK09484 155 AGGRGAVREVCD 166 (183)
T ss_pred CCCCCHHHHHHH
Confidence 777777666543
No 154
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=98.80 E-value=1.3e-08 Score=106.84 Aligned_cols=210 Identities=16% Similarity=0.074 Sum_probs=101.5
Q ss_pred eEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCC-----
Q 002660 5 NYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNS----- 79 (895)
Q Consensus 5 ~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~----- 79 (895)
||+|+|.-. +.=.-+||...++..|+++|+++| |+|.|+++.+..-.....-......+.-...
T Consensus 1 kIl~vt~E~---------~P~~k~GGLgdv~~~L~kaL~~~G--~~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~v~~ 69 (245)
T PF08323_consen 1 KILMVTSEY---------APFAKVGGLGDVVGSLPKALAKQG--HDVRVIMPKYGFIDEEYFQLEPVRRLSVPFGGPVPV 69 (245)
T ss_dssp EEEEE-S-B---------TTTB-SSHHHHHHHHHHHHHHHTT---EEEEEEE-THHHHHHCTTEEEEEEES-STTCEEEE
T ss_pred CEEEEEccc---------CcccccCcHhHHHHHHHHHHHhcC--CeEEEEEccchhhhhhhhcceEEEEecccccccccc
Confidence 788998444 311489999999999999999999 9999999876321000000000000000000
Q ss_pred ---CcccccCCCCCCeEEEecCCCCCCcccccccCCC-----ChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEec
Q 002660 80 ---DDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWP-----HIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGH 151 (895)
Q Consensus 80 ---~~~~~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~-----~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h 151 (895)
....-.....+|++++.+... .+..+..+.. +.+... ++..+-+.....+.+ + +++|||||||
T Consensus 70 ~~~~~~~v~~~~~~~v~v~~i~~~---~~f~r~~iY~~~~~~~~d~~~-rf~~fs~a~le~~~~-l----~~~pDIIH~h 140 (245)
T PF08323_consen 70 GVWYEVRVYRYPVDGVPVYFIDNP---EYFDRPGIYGDNGGDYPDNAE-RFAFFSRAALELLKK-L----GWKPDIIHCH 140 (245)
T ss_dssp E----EEEEEEEETTEEEEEEESH---HHHGSSSSSBSTSSBHTTHHH-HHHHHHHHHHHHHCT-C----T-S-SEEEEE
T ss_pred ccceEEEEEEEEcCCccEEEecCh---hhccccceeccCCCcchhHHH-HHHHHHHHHHHHHHh-h----CCCCCEEEec
Confidence 000000001146666665432 1222222211 111111 111111111111111 1 2579999999
Q ss_pred cccchhHHHHHhccC-------CCCEEEEeCCCchhhHHH--HHHHhhccHHH--HHhhhhhhHHHHHHHhhhcccCEEE
Q 002660 152 YADAGDSAALLSGAL-------NVPMLFTGHSLGRDKLEQ--LLKQARLSRDE--INATYKIMRRIEAEELSLDASEIVI 220 (895)
Q Consensus 152 ~~~~~~~~~~~~~~~-------~ip~v~t~H~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~e~~~l~~ad~vi 220 (895)
.|.+++++.++.... ++|+|+|+|++..+.... .+..-.++... ....+.+...+..++..+..||.|+
T Consensus 141 DW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~in~lk~gi~~AD~v~ 220 (245)
T PF08323_consen 141 DWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQINFLKAGIVYADKVT 220 (245)
T ss_dssp CGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEEEHHHHHHHHSSEEE
T ss_pred CchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccccccccccCHHHHHHHhcCEee
Confidence 999999999888765 599999999975432100 00000000000 0000111223334567899999999
Q ss_pred eCChHHHHHHHhhh
Q 002660 221 TSTRQEIEEQWRLY 234 (895)
Q Consensus 221 ~~s~~~~~~~~~~~ 234 (895)
++|+..++++...+
T Consensus 221 TVS~~Ya~Ei~~~~ 234 (245)
T PF08323_consen 221 TVSPTYAREIQTPE 234 (245)
T ss_dssp ESSHHHHHHTTSHH
T ss_pred eCCHHHHHHHhCcc
Confidence 99999888875543
No 155
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=98.69 E-value=2.1e-06 Score=94.59 Aligned_cols=82 Identities=17% Similarity=0.210 Sum_probs=59.5
Q ss_pred CCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchh------ccccCCCeEEeC
Q 002660 381 YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVD------IHRVLDNGLLVD 454 (895)
Q Consensus 381 ~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~e------iv~~~~~g~lv~ 454 (895)
.+++.+.++.+ +++.++|..| |++|.-+ -..++.|++++|+|+|.....+..| .+...+.|+.++
T Consensus 228 ~~~v~~~~~~~-~~~~~~l~~a----d~vI~~~----G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~ 298 (321)
T TIGR00661 228 NENVEIRRITT-DNFKELIKNA----ELVITHG----GFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALE 298 (321)
T ss_pred CCCEEEEECCh-HHHHHHHHhC----CEEEECC----ChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcC
Confidence 46788888755 6899999999 9998764 2347999999999999988755333 344556788887
Q ss_pred CCCHHHHHHHHHHHHhCH
Q 002660 455 PHDQQSVADALLKLVADK 472 (895)
Q Consensus 455 p~d~~~la~ai~~ll~~~ 472 (895)
..+. ++.+++...++++
T Consensus 299 ~~~~-~~~~~~~~~~~~~ 315 (321)
T TIGR00661 299 YKEL-RLLEAILDIRNMK 315 (321)
T ss_pred hhhH-HHHHHHHhccccc
Confidence 7666 5555555555543
No 156
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=98.62 E-value=3.6e-07 Score=87.23 Aligned_cols=128 Identities=20% Similarity=0.226 Sum_probs=80.7
Q ss_pred hHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCcccccccC
Q 002660 32 VKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELL 111 (895)
Q Consensus 32 ~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~~~~~~~~ 111 (895)
+.++.+++++|.++| ++|+++|.....+.. ...+++.+++++.+.. . .
T Consensus 10 ~~~~~~~~~~L~~~g--~~V~ii~~~~~~~~~-----------------------~~~~~i~~~~~~~~~k--~-----~ 57 (139)
T PF13477_consen 10 STFIYNLAKELKKRG--YDVHIITPRNDYEKY-----------------------EIIEGIKVIRLPSPRK--S-----P 57 (139)
T ss_pred HHHHHHHHHHHHHCC--CEEEEEEcCCCchhh-----------------------hHhCCeEEEEecCCCC--c-----c
Confidence 458999999999999 999999984321110 0124888888864321 1 2
Q ss_pred CCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccc-hhHHHHHhccCC-CCEEEEeCCCchhhHHHHHHHh
Q 002660 112 WPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADA-GDSAALLSGALN-VPMLFTGHSLGRDKLEQLLKQA 189 (895)
Q Consensus 112 ~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~-~~~~~~~~~~~~-ip~v~t~H~~~~~~~~~~~~~~ 189 (895)
++++. + ..+...+ .+ .+|||||+|...+ ++++..+++..+ +|+|++.|+...... .
T Consensus 58 ~~~~~-~-~~l~k~i-------k~-------~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~~~~------~ 115 (139)
T PF13477_consen 58 LNYIK-Y-FRLRKII-------KK-------EKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDFYNS------S 115 (139)
T ss_pred HHHHH-H-HHHHHHh-------cc-------CCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCeeecC------C
Confidence 22221 1 1222222 22 7899999999864 777888888888 999999998643110 0
Q ss_pred hccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCC
Q 002660 190 RLSRDEINATYKIMRRIEAEELSLDASEIVITST 223 (895)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s 223 (895)
.. .++.+. .++.+++.+|.|++.|
T Consensus 116 --~~------~~~~~~--~~~~~~k~~~~ii~~~ 139 (139)
T PF13477_consen 116 --KK------KKLKKF--IIKFAFKRADKIIVQS 139 (139)
T ss_pred --ch------HHHHHH--HHHHHHHhCCEEEEcC
Confidence 00 001122 2556899999999865
No 157
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=98.60 E-value=7.3e-06 Score=88.32 Aligned_cols=364 Identities=15% Similarity=0.130 Sum_probs=207.4
Q ss_pred CcceeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCC
Q 002660 1 MIFNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSD 80 (895)
Q Consensus 1 ~~~m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~ 80 (895)
|.||||+.|. |..+| ..-+.-+.+++.+.+++....++|.+..+.+....|
T Consensus 1 m~~~Kv~~I~------GTRPE----------~iKmapli~~~~~~~~~~~~vi~TGQH~d~em~~~~------------- 51 (383)
T COG0381 1 MKMLKVLTIF------GTRPE----------AIKMAPLVKALEKDPDFELIVIHTGQHRDYEMLDQV------------- 51 (383)
T ss_pred CCceEEEEEE------ecCHH----------HHHHhHHHHHHHhCCCCceEEEEecccccHHHHHHH-------------
Confidence 7889999887 22322 234556888999998777777788775432211110
Q ss_pred cccccCCCCCCeEEEecCCCCCCcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccc-cchhHH
Q 002660 81 DFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYA-DAGDSA 159 (895)
Q Consensus 81 ~~~~~~~~~~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~-~~~~~~ 159 (895)
.++..++. |. ..+..-.--.-+.......+..+..+. .+ .+||+|..|.= .+.+++
T Consensus 52 -----------le~~~i~~-pd-y~L~i~~~~~tl~~~t~~~i~~~~~vl---~~-------~kPD~VlVhGDT~t~lA~ 108 (383)
T COG0381 52 -----------LELFGIRK-PD-YDLNIMKPGQTLGEITGNIIEGLSKVL---EE-------EKPDLVLVHGDTNTTLAG 108 (383)
T ss_pred -----------HHHhCCCC-CC-cchhccccCCCHHHHHHHHHHHHHHHH---Hh-------hCCCEEEEeCCcchHHHH
Confidence 11111111 11 111111001123334444444443322 22 78999998864 566666
Q ss_pred HHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCCh
Q 002660 160 ALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDP 239 (895)
Q Consensus 160 ~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~ 239 (895)
+.++...+||+.+.--++-.... .++.. +-|+ .+-.-|+.-+++|....+.+.+.
T Consensus 109 alaa~~~~IpV~HvEAGlRt~~~-------~~PEE-------~NR~-----l~~~~S~~hfapte~ar~nLl~E------ 163 (383)
T COG0381 109 ALAAFYLKIPVGHVEAGLRTGDL-------YFPEE-------INRR-----LTSHLSDLHFAPTEIARKNLLRE------ 163 (383)
T ss_pred HHHHHHhCCceEEEecccccCCC-------CCcHH-------HHHH-----HHHHhhhhhcCChHHHHHHHHHc------
Confidence 88888899999876665421000 00110 1111 13456778888888777766442
Q ss_pred HHHHHHHHhHhccccccCCCCCCEEEeCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCC-cEEE
Q 002660 240 VLERKLRARIKRNVSCYGKFMPRMAIIPPGM-EFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRK-PVIL 317 (895)
Q Consensus 240 ~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gi-d~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~il 317 (895)
|.+..+|.++.|.+ |.-........ ... .....+....++ .+++
T Consensus 164 -----------------G~~~~~IfvtGnt~iDal~~~~~~~~--------------~~~---~~~~~~~~~~~~~~iLv 209 (383)
T COG0381 164 -----------------GVPEKRIFVTGNTVIDALLNTRDRVL--------------EDS---KILAKGLDDKDKKYILV 209 (383)
T ss_pred -----------------CCCccceEEeCChHHHHHHHHHhhhc--------------cch---hhHHhhhccccCcEEEE
Confidence 44445788888764 21111100000 000 001111223343 4455
Q ss_pred EEeCCCCC-CCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHH
Q 002660 318 ALARPDPK-KNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVP 396 (895)
Q Consensus 318 ~vgrl~~~-Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~ 396 (895)
..-|-... +++..+++|+.++.++. +++.+|....+. ..+.++. ...++-.++|.+...+...+..
T Consensus 210 T~HRreN~~~~~~~i~~al~~i~~~~--~~~~viyp~H~~---------~~v~e~~--~~~L~~~~~v~li~pl~~~~f~ 276 (383)
T COG0381 210 TAHRRENVGEPLEEICEALREIAEEY--PDVIVIYPVHPR---------PRVRELV--LKRLKNVERVKLIDPLGYLDFH 276 (383)
T ss_pred EcchhhcccccHHHHHHHHHHHHHhC--CCceEEEeCCCC---------hhhhHHH--HHHhCCCCcEEEeCCcchHHHH
Confidence 55554433 88999999999887644 455556555443 0122222 3566666789999999999999
Q ss_pred HHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCC-CchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHH
Q 002660 397 EIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG-GPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLW 475 (895)
Q Consensus 397 ~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~g-g~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~ 475 (895)
.|...| .++++ ..|-..-||-..|+||++-..+ .-+|.++ .+.-.++. .+.+.+.+++..++++++..
T Consensus 277 ~L~~~a-----~~ilt----DSGgiqEEAp~lg~Pvl~lR~~TERPE~v~-agt~~lvg-~~~~~i~~~~~~ll~~~~~~ 345 (383)
T COG0381 277 NLMKNA-----FLILT----DSGGIQEEAPSLGKPVLVLRDTTERPEGVE-AGTNILVG-TDEENILDAATELLEDEEFY 345 (383)
T ss_pred HHHHhc-----eEEEe----cCCchhhhHHhcCCcEEeeccCCCCcccee-cCceEEeC-ccHHHHHHHHHHHhhChHHH
Confidence 999999 55655 2456678999999999986543 3345443 34446665 47899999999999999988
Q ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 002660 476 ARCRQNGLKNIHLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 476 ~~~~~~~~~~~~~~s~~~~a~~~~~~~~ 503 (895)
++|++..- .|.-...++++.+++.
T Consensus 346 ~~m~~~~n----pYgdg~as~rIv~~l~ 369 (383)
T COG0381 346 ERMSNAKN----PYGDGNASERIVEILL 369 (383)
T ss_pred HHHhcccC----CCcCcchHHHHHHHHH
Confidence 87765443 3433334444444443
No 158
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.52 E-value=2.2e-07 Score=90.20 Aligned_cols=67 Identities=13% Similarity=0.181 Sum_probs=55.7
Q ss_pred EEEEEecCCCC--------------cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHH---HHHHh-----CCCCC
Q 002660 614 IFVISVDCDST--------------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIH---SFLVS-----GHLSP 671 (895)
Q Consensus 614 li~~DiDGTL~--------------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~---~~l~~-----l~l~~ 671 (895)
+|++||||||+ ...++.+.+++++++++ |+.|+++|||+...+. +++.+ .+++
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~----G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp- 75 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNN----GYKILYLTARPIGQADRTRSYLSQIKQDGHNLP- 75 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHc----CCeEEEEcCCcHHHHHHHHHHHHHhhhccccCC-
Confidence 58999999993 35688999999999998 5999999999999884 78887 3352
Q ss_pred CCCCEEEEcCCceEee
Q 002660 672 SDFDAFICNSGSDLYY 687 (895)
Q Consensus 672 ~~~d~~I~~nGa~I~~ 687 (895)
.++++++||+.++.
T Consensus 76 --~g~li~~~g~~~~~ 89 (157)
T smart00775 76 --HGPVLLSPDRLFAA 89 (157)
T ss_pred --CceEEEcCCcchhh
Confidence 35899999999864
No 159
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=98.50 E-value=2.2e-06 Score=81.95 Aligned_cols=199 Identities=14% Similarity=0.129 Sum_probs=111.6
Q ss_pred cCeEEEEEecCCCC---cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEee
Q 002660 611 RKHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYY 687 (895)
Q Consensus 611 ~~kli~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~ 687 (895)
.+-|+.||+||||+ ..+++...+.++.|++. +.+.++-|-.++-+.+-+..--+ ..+||.-+.||-.-|.
T Consensus 10 ~~~l~lfdvdgtLt~~r~~~~~e~~~~l~~lr~~-----v~ig~VggsDl~k~~eqlG~~Vl--~~fDY~F~ENGl~~yk 82 (252)
T KOG3189|consen 10 EETLCLFDVDGTLTPPRQKVTPEMLEFLQKLRKK-----VTIGFVGGSDLSKQQEQLGDNVL--EEFDYVFSENGLVAYK 82 (252)
T ss_pred CceEEEEecCCccccccccCCHHHHHHHHHHhhh-----eEEEEeecHHHHHHHHHhchhHH--hhhcccccCCCeeEee
Confidence 34589999999995 56788888999998886 88999999777666554422112 3579999999998887
Q ss_pred ccCCCCCCCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEEEeeCCCC-------
Q 002660 688 STLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGM------- 760 (895)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~------- 760 (895)
.+ +....+....++......+.+.-.+..+.......+ ...+.+.- .....++=.-++...
T Consensus 83 ~g------k~~~~Qsi~~~LGee~~q~liNF~LrYlsdidlPiK----RGtFiEFR--NgMiNvsPIGR~cs~EER~eF~ 150 (252)
T KOG3189|consen 83 GG------KLLSKQSIINHLGEEKLQELINFCLRYLSDIDLPIK----RGTFIEFR--NGMINVSPIGRNCSQEERNEFE 150 (252)
T ss_pred CC------cchhHHHHHHHHhHHHHHHHHHHHHHHHHhcCCccc----ccceEEec--CCceeccccccccCHHHHHHHH
Confidence 65 333333334444332111222222222222211111 01111100 001111111011000
Q ss_pred ----C-ccHHHHHHHHHhccCeEEEEEecCC-eeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecC----CCCCCccc
Q 002660 761 ----T-PPVKELRKVLRIQALRCHVIYCQNG-SRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGE----SGDTDYEG 830 (895)
Q Consensus 761 ----~-~~~~~l~~~l~~~~~~~~~~~s~~~-~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd----~nn~D~~e 830 (895)
. ..-+++-+.|++......+++|-++ -.+||.|+|..|-.-|++|-+. |.+ .|-|+|| .+| | .|
T Consensus 151 e~Dkk~~iR~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d-gf~---~IhFFGDkT~~GGN-D-yE 224 (252)
T KOG3189|consen 151 ELDKKHKIREKFVEALREEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD-GFD---TIHFFGDKTMPGGN-D-YE 224 (252)
T ss_pred HhhhhhhhHHHHHHHHHHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc-CCc---eEEEeccccCCCCC-c-ce
Confidence 0 0011223334444344555666553 3699999999999999998776 666 7777888 457 7 88
Q ss_pred cccC
Q 002660 831 LLGG 834 (895)
Q Consensus 831 Ml~~ 834 (895)
.|.-
T Consensus 225 If~d 228 (252)
T KOG3189|consen 225 IFAD 228 (252)
T ss_pred eeeC
Confidence 8754
No 160
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.46 E-value=7.4e-07 Score=90.97 Aligned_cols=52 Identities=23% Similarity=0.301 Sum_probs=44.6
Q ss_pred eEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEec
Q 002660 788 RINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 842 (895)
Q Consensus 788 ~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMg 842 (895)
.+-.+-.+-+|..+++.+++.+|+++++++| .||+.| | ++||+.||.+||..
T Consensus 135 v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a-~gDs~n-D-lpml~~ag~~ia~n 186 (212)
T COG0560 135 VVGPICDGEGKAKALRELAAELGIPLEETVA-YGDSAN-D-LPMLEAAGLPIAVN 186 (212)
T ss_pred eeeeecCcchHHHHHHHHHHHcCCCHHHeEE-EcCchh-h-HHHHHhCCCCeEeC
Confidence 3444445568999999999999999999999 777777 7 99999999999995
No 161
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.43 E-value=2.8e-05 Score=83.50 Aligned_cols=98 Identities=22% Similarity=0.304 Sum_probs=74.0
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCC
Q 002660 313 KPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQ 392 (895)
Q Consensus 313 ~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~ 392 (895)
+.++++.|..++.+....+++++..+ ....++.+|+|.+... .+++.+.+... +++.+.++ .
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~---~~~~~i~vv~G~~~~~----------~~~l~~~~~~~---~~i~~~~~--~ 232 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAES---QINISITLVTGSSNPN----------LDELKKFAKEY---PNIILFID--V 232 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhcc---ccCceEEEEECCCCcC----------HHHHHHHHHhC---CCEEEEeC--H
Confidence 56899999999877677888888765 3445676788876321 23455555442 47888888 4
Q ss_pred CCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCC
Q 002660 393 SDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN 437 (895)
Q Consensus 393 ~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~ 437 (895)
+++.++++.| |++|.+ .|.++.|++++|+|+|+-..
T Consensus 233 ~~m~~lm~~a----Dl~Is~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 233 ENMAELMNEA----DLAIGA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred HHHHHHHHHC----CEEEEC-----CchHHHHHHHcCCCEEEEEe
Confidence 6899999999 999875 56899999999999998654
No 162
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.37 E-value=6.4e-05 Score=80.46 Aligned_cols=192 Identities=15% Similarity=0.110 Sum_probs=137.0
Q ss_pred CEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc
Q 002660 262 RMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPL 341 (895)
Q Consensus 262 ~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~ 341 (895)
++..+|.++|.+.|.+..++. .-.--+.++|...+. +.+..+++.-.
T Consensus 162 ~~~~~~~a~d~~~~~~i~~da----------------------------~~~~dL~~ign~~pD-----r~e~~ke~~~~ 208 (373)
T COG4641 162 NCYYLPWAVDDSLFHPIPPDA----------------------------SYDVDLNLIGNPYPD-----RVEEIKEFFVE 208 (373)
T ss_pred ceeccCccCCchhcccCCccc----------------------------cceeeeEEecCCCcc-----HHHHHHHHhhc
Confidence 788999999999998765332 112247777776554 44555444311
Q ss_pred c--CCCc-EEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCC-CCHHHHHHHhhcCCcEEEecCC--
Q 002660 342 R--ELAN-LTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQ-SDVPEIYRLAAKTKGVFINPAF-- 414 (895)
Q Consensus 342 ~--~~~~-l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~-~el~~ly~~A~~~~dv~v~ps~-- 414 (895)
. +... ..+ +.|.+-. ..+-...|.+++.+.|+++. ..++..++.- +++++-+.
T Consensus 209 ps~kl~v~rr~~~~g~~y~----------------~~~~~~~~~~~~~yIg~~~~~~~v~~~~~~~----~~~~n~~r~~ 268 (373)
T COG4641 209 PSFKLMVDRRFYVLGPRYP----------------DDIWGRTWEPNVQYIGYYNPKDGVPNAFKRD----DVTLNINRAS 268 (373)
T ss_pred cchhhhccceeeecCCccc----------------hhhhcccccchhhhhhccCccchhhhccccc----ceeeeecHHH
Confidence 1 1111 112 3344310 11222235567777788777 7888999988 88887754
Q ss_pred -CCC---CchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcC
Q 002660 415 -IEP---FGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLF 489 (895)
Q Consensus 415 -~Eg---~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~-~~~ 489 (895)
.++ +++-+.|+++||.|.+++..-+..-++..+..-++. .|..++.+.+..++..+++++++.+.+.+.+ ..|
T Consensus 269 ~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv~--~d~kdl~~~~~yll~h~~erkeiae~~ye~V~~~h 346 (373)
T COG4641 269 IANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIVY--QDSKDLKEKLKYLLNHPDERKEIAECAYERVLARH 346 (373)
T ss_pred HHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEEe--cCHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHhc
Confidence 222 378899999999999999998888888777665555 4899999999999999999999999999999 589
Q ss_pred CHHHHHHHHHHHHHcccCC
Q 002660 490 SWPEHCKTYLSRIAGCKPR 508 (895)
Q Consensus 490 s~~~~a~~~~~~~~~~~~~ 508 (895)
+.++-+..+++.+..+..+
T Consensus 347 t~~~r~~~~~~~i~sI~~r 365 (373)
T COG4641 347 TYEERIFKLLNEIASINIR 365 (373)
T ss_pred cHHHHHHHHHHHHHHHHHh
Confidence 9999999999988876544
No 163
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.35 E-value=1.1e-06 Score=83.20 Aligned_cols=52 Identities=17% Similarity=0.215 Sum_probs=45.4
Q ss_pred EEEEEecCCCC--c---------chhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 614 IFVISVDCDST--T---------GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 614 li~~DiDGTL~--~---------~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
+++||+||||. . .+.+.+.+.++.|+++ |+.++|+|||....+..+++.+++
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~----g~~i~ivS~~~~~~~~~~~~~~~~ 63 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEK----GIKLALATNKSRREVLELLEELGL 63 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHHHHC----CCeEEEEeCchHHHHHHHHHHcCC
Confidence 47999999993 2 5567899999999997 599999999999999999999886
No 164
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.34 E-value=6.9e-07 Score=82.57 Aligned_cols=55 Identities=15% Similarity=0.136 Sum_probs=45.3
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEecCccccccccccccC
Q 002660 797 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANR 856 (895)
Q Consensus 797 sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgNa~~~~~~~~~a~~ 856 (895)
+|-.+.+.|+++++++++++.. +||+-+ | +++|+.+|+++|+.+|. .+.+.++++
T Consensus 83 dK~~a~~~L~~~~~l~~e~~ay-iGDD~~-D-lpvm~~vGls~a~~dAh--~~v~~~a~~ 137 (170)
T COG1778 83 DKLAAFEELLKKLNLDPEEVAY-VGDDLV-D-LPVMEKVGLSVAVADAH--PLLKQRADY 137 (170)
T ss_pred hHHHHHHHHHHHhCCCHHHhhh-hcCccc-c-HHHHHHcCCcccccccC--HHHHHhhHh
Confidence 4777888999999999999877 666666 7 99999999999999999 555555544
No 165
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=98.32 E-value=0.00015 Score=79.05 Aligned_cols=66 Identities=23% Similarity=0.246 Sum_probs=49.8
Q ss_pred CHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCC---CchhccccCCCeEEeCCCCHHHHHHHHHHHHh
Q 002660 394 DVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG---GPVDIHRVLDNGLLVDPHDQQSVADALLKLVA 470 (895)
Q Consensus 394 el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~g---g~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~ 470 (895)
+...++.-| |++| -+-|....||...|+|.|++..| +..+.+. ..|+++.-.|++++.+.+.+.+.
T Consensus 241 d~~~Ll~~a----~l~I-----g~ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~--~~Gll~~~~~~~ei~~~v~~~~~ 309 (335)
T PF04007_consen 241 DGLDLLYYA----DLVI-----GGGGTMAREAALLGTPAISCFPGKLLAVDKYLI--EKGLLYHSTDPDEIVEYVRKNLG 309 (335)
T ss_pred CHHHHHHhc----CEEE-----eCCcHHHHHHHHhCCCEEEecCCcchhHHHHHH--HCCCeEecCCHHHHHHHHHHhhh
Confidence 555889999 8987 34678889999999999997654 3333433 35889988899999887766554
No 166
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=98.19 E-value=6.9e-06 Score=86.66 Aligned_cols=70 Identities=14% Similarity=0.246 Sum_probs=58.0
Q ss_pred eEEEEEecCCC--CcchhHHHHHHHHHHHhhccCCCeEEEEEcC---CCHHHHHHHHHhCCCCCCCCCEEEEcCCceEee
Q 002660 613 HIFVISVDCDS--TTGLLDATKKICEAVEKERTEGSIGFILSTS---MTISEIHSFLVSGHLSPSDFDAFICNSGSDLYY 687 (895)
Q Consensus 613 kli~~DiDGTL--~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTG---R~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~ 687 (895)
|+++||+|||| .....+.+.+++++|+++ |+.|+++|| |+...+...++.+|++. .+|-+|+++|+.+.+
T Consensus 2 ~~~~~D~DGtl~~~~~~i~~a~~~l~~l~~~----g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~-~~~~iit~~~~~~~~ 76 (249)
T TIGR01457 2 KGYLIDLDGTMYKGKERIPEAETFVHELQKR----DIPYLFVTNNSTRTPESVAEMLASFDIPA-TLETVFTASMATADY 76 (249)
T ss_pred CEEEEeCCCceEcCCeeCcCHHHHHHHHHHC----CCeEEEEeCCCCCCHHHHHHHHHHcCCCC-ChhhEeeHHHHHHHH
Confidence 58999999999 233445789999999998 599999995 99999999999999863 457799999887544
No 167
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=98.18 E-value=0.00035 Score=81.33 Aligned_cols=154 Identities=13% Similarity=0.084 Sum_probs=97.8
Q ss_pred CcEEEEEeCCCC-----CCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeC
Q 002660 313 KPVILALARPDP-----KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYP 387 (895)
Q Consensus 313 ~~~il~vgrl~~-----~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~ 387 (895)
..++++.|.... .+-+..+++|++.+. .++ ++-.+++.. . .++.++|.+.
T Consensus 297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~-----~~v-iw~~~~~~~------------------~-~~~p~Nv~i~ 351 (507)
T PHA03392 297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLP-----YNV-LWKYDGEVE------------------A-INLPANVLTQ 351 (507)
T ss_pred cEEEEECCCCCcCCCCCHHHHHHHHHHHHhCC-----CeE-EEEECCCcC------------------c-ccCCCceEEe
Confidence 467888888643 233567778877663 133 232222110 0 2356789999
Q ss_pred CCCCCCCHHHHHH--HhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCC----chhccccCCCeEEeCCC--CHH
Q 002660 388 KHHKQSDVPEIYR--LAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHRVLDNGLLVDPH--DQQ 459 (895)
Q Consensus 388 g~~~~~el~~ly~--~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg----~~eiv~~~~~g~lv~p~--d~~ 459 (895)
+++|+. +++. .+ ++||.= |-..++.||+.+|+|+|+-...+ ....++..+.|+.++.. +.+
T Consensus 352 ~w~Pq~---~lL~hp~v----~~fItH----GG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~ 420 (507)
T PHA03392 352 KWFPQR---AVLKHKNV----KAFVTQ----GGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAA 420 (507)
T ss_pred cCCCHH---HHhcCCCC----CEEEec----CCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCHH
Confidence 999875 4563 35 777743 55678999999999999977543 23334455678877653 578
Q ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHH
Q 002660 460 SVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRI 502 (895)
Q Consensus 460 ~la~ai~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~ 502 (895)
++.++|.+++++|+-++...+-+.... +..+...-|-.+.+.+
T Consensus 421 ~l~~ai~~vl~~~~y~~~a~~ls~~~~~~p~~~~~~av~~iE~v 464 (507)
T PHA03392 421 QLVLAIVDVIENPKYRKNLKELRHLIRHQPMTPLHKAIWYTEHV 464 (507)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 999999999999876665555444444 2444555555555444
No 168
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=98.14 E-value=6.2e-06 Score=75.99 Aligned_cols=59 Identities=17% Similarity=0.228 Sum_probs=44.7
Q ss_pred eEEEEEecCCCCc---c------hhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHH---------------HHHHHHhCC
Q 002660 613 HIFVISVDCDSTT---G------LLDATKKICEAVEKERTEGSIGFILSTSMTISE---------------IHSFLVSGH 668 (895)
Q Consensus 613 kli~~DiDGTL~~---~------~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~---------------~~~~l~~l~ 668 (895)
|+|++|+||||.. . +.+.+.+++++++++ |+.|+++|||+... +..||.+.+
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~----G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ 77 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKAL----GFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHN 77 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHC----CCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcC
Confidence 6899999999931 1 345677777777776 69999999998764 467888989
Q ss_pred CCCCCCCEEE
Q 002660 669 LSPSDFDAFI 678 (895)
Q Consensus 669 l~~~~~d~~I 678 (895)
++ +|-++
T Consensus 78 ip---Yd~l~ 84 (126)
T TIGR01689 78 VP---YDEIY 84 (126)
T ss_pred CC---CceEE
Confidence 85 45444
No 169
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=98.10 E-value=0.0013 Score=69.52 Aligned_cols=338 Identities=16% Similarity=0.137 Sum_probs=173.7
Q ss_pred ceeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcC--CCeeEEEEeecCccCCCCCCCCCCcccccCCCCCC
Q 002660 3 FNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSM--PGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSD 80 (895)
Q Consensus 3 ~m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~--G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~ 80 (895)
+|||+|.|.|-+ |. |.-+....+|++|.+. | .+|.+++....-+...
T Consensus 9 ~~Ri~~Yshd~~--------Gl-----GHlrR~~~Ia~aLv~d~~~--~~Il~IsG~~~~~~F~---------------- 57 (400)
T COG4671 9 RPRILFYSHDLL--------GL-----GHLRRALRIAHALVEDYLG--FDILIISGGPPAGGFP---------------- 57 (400)
T ss_pred cceEEEEehhhc--------cc-----hHHHHHHHHHHHHhhcccC--ceEEEEeCCCccCCCC----------------
Confidence 469999996653 44 8899999999999998 8 9999999864322221
Q ss_pred cccccCCCCCCeEEEecCCCCC--CcccccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhH
Q 002660 81 DFMDDMGESSGAYIIRIPFGPK--DKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDS 158 (895)
Q Consensus 81 ~~~~~~~~~~gv~i~~i~~~~~--~~~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~ 158 (895)
...|++.+.+|+-.. +..+....+-..+.++...-...+...+ +..+||++.......|..
T Consensus 58 -------~~~gVd~V~LPsl~k~~~G~~~~~d~~~~l~e~~~~Rs~lil~t~----------~~fkPDi~IVd~~P~Glr 120 (400)
T COG4671 58 -------GPAGVDFVKLPSLIKGDNGEYGLVDLDGDLEETKKLRSQLILSTA----------ETFKPDIFIVDKFPFGLR 120 (400)
T ss_pred -------CcccCceEecCceEecCCCceeeeecCCCHHHHHHHHHHHHHHHH----------HhcCCCEEEEeccccchh
Confidence 124899999997221 0112222222224343322111121111 128899999987644422
Q ss_pred HHH---H--hccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhh
Q 002660 159 AAL---L--SGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRL 233 (895)
Q Consensus 159 ~~~---~--~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~ 233 (895)
.-. + -+..+.+.|.-+.+.-..- . ...+-.++-..++.+-++.|.|.+...-...+....
T Consensus 121 ~EL~ptL~yl~~~~t~~vL~lr~i~D~p-~--------------~~~~~w~~~~~~~~I~r~yD~V~v~GdP~f~d~~~~ 185 (400)
T COG4671 121 FELLPTLEYLKTTGTRLVLGLRSIRDIP-Q--------------ELEADWRRAETVRLINRFYDLVLVYGDPDFYDPLTE 185 (400)
T ss_pred hhhhHHHHHHhhcCCcceeehHhhhhch-h--------------hhccchhhhHHHHHHHHhheEEEEecCccccChhhc
Confidence 111 1 1122344444444431110 0 000011222234556778999999765444333333
Q ss_pred hcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHhhhhcCCCCC
Q 002660 234 YDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRK 313 (895)
Q Consensus 234 ~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (895)
|+- .+.+ +-.+.+.|.= .+--+.... +. ...++..
T Consensus 186 ~~~-~~~i--------------------~~k~~ytG~v-q~~~~~~~~----------------p~-------~~~pE~~ 220 (400)
T COG4671 186 FPF-APAI--------------------RAKMRYTGFV-QRSLPHLPL----------------PP-------HEAPEGF 220 (400)
T ss_pred CCc-cHhh--------------------hhheeEeEEe-eccCcCCCC----------------CC-------cCCCccc
Confidence 332 1111 2234444432 110010000 00 0002446
Q ss_pred cEEEEEeCC-CCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCC
Q 002660 314 PVILALARP-DPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQ 392 (895)
Q Consensus 314 ~~il~vgrl-~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~ 392 (895)
.+++++|.- +...=+...+.|+..+..+++ +..+|.|.- |. + ...+++.....-.++|.+..+ .
T Consensus 221 ~Ilvs~GGG~dG~eLi~~~l~A~~~l~~l~~--~~~ivtGP~-----MP---~---~~r~~l~~~A~~~p~i~I~~f--~ 285 (400)
T COG4671 221 DILVSVGGGADGAELIETALAAAQLLAGLNH--KWLIVTGPF-----MP---E---AQRQKLLASAPKRPHISIFEF--R 285 (400)
T ss_pred eEEEecCCChhhHHHHHHHHHHhhhCCCCCc--ceEEEeCCC-----CC---H---HHHHHHHHhcccCCCeEEEEh--h
Confidence 677777753 222334455555555543222 354455542 22 2 223333344444567888888 7
Q ss_pred CCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchh--ccc-----cCCCeEEeCCC--CHHHHHH
Q 002660 393 SDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVD--IHR-----VLDNGLLVDPH--DQQSVAD 463 (895)
Q Consensus 393 ~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~e--iv~-----~~~~g~lv~p~--d~~~la~ 463 (895)
.++..|+..| +..|.- -|+ ++..|-+++|+|-+.-..+...| ++. ..+-.-+..|+ .++.+|+
T Consensus 286 ~~~~~ll~gA----~~vVSm---~GY-NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~La~ 357 (400)
T COG4671 286 NDFESLLAGA----RLVVSM---GGY-NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTPQNLAD 357 (400)
T ss_pred hhHHHHHHhh----heeeec---ccc-hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCChHHHHH
Confidence 8999999999 887743 234 46679999999988766544433 111 11111122333 3667777
Q ss_pred HHHHHHhC
Q 002660 464 ALLKLVAD 471 (895)
Q Consensus 464 ai~~ll~~ 471 (895)
+|..+++.
T Consensus 358 al~~~l~~ 365 (400)
T COG4671 358 ALKAALAR 365 (400)
T ss_pred HHHhcccC
Confidence 77777763
No 170
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=98.09 E-value=0.00039 Score=78.68 Aligned_cols=114 Identities=15% Similarity=0.095 Sum_probs=79.7
Q ss_pred cCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCC----chhccccCCCeEEe
Q 002660 378 YDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHRVLDNGLLV 453 (895)
Q Consensus 378 ~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg----~~eiv~~~~~g~lv 453 (895)
.++..++...+++|+. +++..| |++|.. |-..+..||+.+|+|+|+-..+. ..+.++.-+.|...
T Consensus 280 ~~~p~n~~v~~~~p~~---~~l~~a----d~vI~h----GG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l 348 (406)
T COG1819 280 VNVPDNVIVADYVPQL---ELLPRA----DAVIHH----GGAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIAL 348 (406)
T ss_pred ccCCCceEEecCCCHH---HHhhhc----CEEEec----CCcchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceec
Confidence 3566788888888765 589999 999976 45567899999999999976653 23445556778777
Q ss_pred C--CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHH
Q 002660 454 D--PHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 454 ~--p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~ 503 (895)
. ..+.+.++++|.++|+++..++... ..++.. +.-.....++.+.+..+
T Consensus 349 ~~~~l~~~~l~~av~~vL~~~~~~~~~~-~~~~~~~~~~g~~~~a~~le~~~~ 400 (406)
T COG1819 349 PFEELTEERLRAAVNEVLADDSYRRAAE-RLAEEFKEEDGPAKAADLLEEFAR 400 (406)
T ss_pred CcccCCHHHHHHHHHHHhcCHHHHHHHH-HHHHHhhhcccHHHHHHHHHHHHh
Confidence 6 6889999999999999987555443 344444 34443444444444343
No 171
>PLN02448 UDP-glycosyltransferase family protein
Probab=98.09 E-value=0.0048 Score=71.28 Aligned_cols=91 Identities=12% Similarity=0.016 Sum_probs=57.5
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcE--EEecCCCCCCchHHHHHHHcCCCEEEcCCCCc----hhcccc-CCCeEEeC
Q 002660 382 GQVAYPKHHKQSDVPEIYRLAAKTKGV--FINPAFIEPFGLTLIEAAAHGLPIVATKNGGP----VDIHRV-LDNGLLVD 454 (895)
Q Consensus 382 ~~v~~~g~~~~~el~~ly~~A~~~~dv--~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~----~eiv~~-~~~g~lv~ 454 (895)
+++.+.++.|+.+ ++..+ ++ ||.- +-..+++||+++|+|+|+-...+- ...+.+ -+.|+-+.
T Consensus 323 ~~~~v~~w~pQ~~---iL~h~----~v~~fvtH----gG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~ 391 (459)
T PLN02448 323 DMGLVVPWCDQLK---VLCHS----SVGGFWTH----CGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVK 391 (459)
T ss_pred CCEEEeccCCHHH---HhccC----ccceEEec----CchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEe
Confidence 3567778888765 55555 44 4422 344688999999999999775442 222332 24566553
Q ss_pred -------CCCHHHHHHHHHHHHhCH-HHHHHHHHHHH
Q 002660 455 -------PHDQQSVADALLKLVADK-QLWARCRQNGL 483 (895)
Q Consensus 455 -------p~d~~~la~ai~~ll~~~-~~~~~~~~~~~ 483 (895)
..+.++++++++++++++ ++.+.+++++.
T Consensus 392 ~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~ 428 (459)
T PLN02448 392 REVGEETLVGREEIAELVKRFMDLESEEGKEMRRRAK 428 (459)
T ss_pred cccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHH
Confidence 236789999999999864 33334444433
No 172
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.07 E-value=1.1e-05 Score=84.09 Aligned_cols=72 Identities=15% Similarity=0.124 Sum_probs=57.5
Q ss_pred ccCeEEEEEecCCC-C--cch---hHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCc
Q 002660 610 RRKHIFVISVDCDS-T--TGL---LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGS 683 (895)
Q Consensus 610 ~~~kli~~DiDGTL-~--~~~---~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa 683 (895)
...|+|+||+|||| + ..+ .+.+.++|++|+++ |+.++|+|+++...+...++.+|+. ..+| .|+++|.
T Consensus 124 ~~~kvIvFDLDgTLi~~~~~v~irdPgV~EaL~~Lkek----GikLaIaTS~~Re~v~~~L~~lGLd-~YFd-vIIs~Gd 197 (301)
T TIGR01684 124 EPPHVVVFDLDSTLITDEEPVRIRDPRIYDSLTELKKR----GCILVLWSYGDRDHVVESMRKVKLD-RYFD-IIISGGH 197 (301)
T ss_pred ccceEEEEecCCCCcCCCCccccCCHHHHHHHHHHHHC----CCEEEEEECCCHHHHHHHHHHcCCC-cccC-EEEECCc
Confidence 35789999999999 2 222 58999999999998 5999999999999999999999995 2334 4555777
Q ss_pred eEee
Q 002660 684 DLYY 687 (895)
Q Consensus 684 ~I~~ 687 (895)
....
T Consensus 198 v~~~ 201 (301)
T TIGR01684 198 KAEE 201 (301)
T ss_pred cccC
Confidence 6554
No 173
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=98.05 E-value=2.4e-05 Score=83.70 Aligned_cols=108 Identities=21% Similarity=0.287 Sum_probs=73.2
Q ss_pred CHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCch----hccccC-CCeEEe-C------CCCHHHH
Q 002660 394 DVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPV----DIHRVL-DNGLLV-D------PHDQQSV 461 (895)
Q Consensus 394 el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~----eiv~~~-~~g~lv-~------p~d~~~l 461 (895)
|..++.+.| .+.|+||.+||+|.+..|.-.+|+|-|+|+..|.. |.|++. .-|+.+ + .++.+++
T Consensus 493 DYeeFVRGC----HLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL 568 (692)
T KOG3742|consen 493 DYEEFVRGC----HLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQL 568 (692)
T ss_pred CHHHHhccc----cccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHH
Confidence 778888999 99999999999999999999999999999987654 444332 235443 3 2345667
Q ss_pred HHHHHHHHhCHHHHHHHHHHHH-HHh-hcCCHHHHHHHHHHHHHccc
Q 002660 462 ADALLKLVADKQLWARCRQNGL-KNI-HLFSWPEHCKTYLSRIAGCK 506 (895)
Q Consensus 462 a~ai~~ll~~~~~~~~~~~~~~-~~~-~~~s~~~~a~~~~~~~~~~~ 506 (895)
++-|.+.... ..+++..++.+ ++. .-.+|..+..-|.+.=.-.+
T Consensus 569 ~~~m~~F~~q-sRRQRIiqRNrtErLSdLLDWk~lG~~Y~~aR~laL 614 (692)
T KOG3742|consen 569 ASFMYEFCKQ-SRRQRIIQRNRTERLSDLLDWKYLGRYYRKARHLAL 614 (692)
T ss_pred HHHHHHHHHH-HHHHHHHHhcchhhHHHHHhHHHHhHHHHHHHHHHH
Confidence 7766665542 23344333222 333 36899988887776544333
No 174
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=97.98 E-value=0.00015 Score=80.25 Aligned_cols=272 Identities=14% Similarity=0.146 Sum_probs=137.5
Q ss_pred CCCcEEEecc-ccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEe
Q 002660 143 VWPVAIHGHY-ADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 221 (895)
Q Consensus 143 ~~pDvVh~h~-~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~ 221 (895)
.+||+|..+. ....+.++..+..++||++ ++|.--+.. -...|. ..+ ..|. .+-+.|+.-++
T Consensus 66 ~~Pd~Vlv~GD~~~~la~alaA~~~~ipv~-HieaGlRs~---d~~~g~-~de-------~~R~-----~i~~la~lhf~ 128 (346)
T PF02350_consen 66 EKPDAVLVLGDRNEALAAALAAFYLNIPVA-HIEAGLRSG---DRTEGM-PDE-------INRH-----AIDKLAHLHFA 128 (346)
T ss_dssp HT-SEEEEETTSHHHHHHHHHHHHTT-EEE-EES-----S----TTSST-THH-------HHHH-----HHHHH-SEEEE
T ss_pred cCCCEEEEEcCCchHHHHHHHHHHhCCCEE-EecCCCCcc---ccCCCC-chh-------hhhh-----hhhhhhhhhcc
Confidence 6899999886 3567777888889999954 455421100 000011 111 1122 24567999999
Q ss_pred CChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCch
Q 002660 222 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPG-MEFHHIVPQDGDMDGETEGNEDNPASPDPPI 300 (895)
Q Consensus 222 ~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~G-id~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (895)
+++...+.+.+. |.+..+|.++-+. +|.-....... ...
T Consensus 129 ~t~~~~~~L~~~-----------------------G~~~~rI~~vG~~~~D~l~~~~~~~-----------------~~~ 168 (346)
T PF02350_consen 129 PTEEARERLLQE-----------------------GEPPERIFVVGNPGIDALLQNKEEI-----------------EEK 168 (346)
T ss_dssp SSHHHHHHHHHT-----------------------T--GGGEEE---HHHHHHHHHHHTT-----------------CC-
T ss_pred CCHHHHHHHHhc-----------------------CCCCCeEEEEChHHHHHHHHhHHHH-----------------hhh
Confidence 999888877553 3333488887763 33221111000 000
Q ss_pred hHHhhhhcCCCCCcE-EEEEeCCCC---CCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHH
Q 002660 301 WSEIMRFFTNPRKPV-ILALARPDP---KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLID 376 (895)
Q Consensus 301 ~~~~~~~~~~~~~~~-il~vgrl~~---~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~ 376 (895)
.. ...+.....+++ ++..-|... ......+.++++.+.+. +...+.+.+.+.| .....+.+.+.
T Consensus 169 ~~-~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~vi~~~hn~p----------~~~~~i~~~l~ 236 (346)
T PF02350_consen 169 YK-NSGILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAER-QNVPVIFPLHNNP----------RGSDIIIEKLK 236 (346)
T ss_dssp HH-HHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHH-TTEEEEEE--S-H----------HHHHHHHHHHT
T ss_pred hh-hHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhc-CCCcEEEEecCCc----------hHHHHHHHHhc
Confidence 00 011111134444 444444332 23456777777777543 2233323333222 23355555555
Q ss_pred hcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHH-HHHHcCCCEEEcCC-CCchhccccCCCeEEeC
Q 002660 377 KYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLI-EAAAHGLPIVATKN-GGPVDIHRVLDNGLLVD 454 (895)
Q Consensus 377 ~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~-Ea~a~G~PVvas~~-gg~~eiv~~~~~g~lv~ 454 (895)
++ +++.+...++..++..+++.| +++|-= .| .+. ||..+|+|+|.-.. |--.+.+..+. ..++.
T Consensus 237 ~~---~~v~~~~~l~~~~~l~ll~~a----~~vvgd-----Ss-GI~eEa~~lg~P~v~iR~~geRqe~r~~~~-nvlv~ 302 (346)
T PF02350_consen 237 KY---DNVRLIEPLGYEEYLSLLKNA----DLVVGD-----SS-GIQEEAPSLGKPVVNIRDSGERQEGRERGS-NVLVG 302 (346)
T ss_dssp T----TTEEEE----HHHHHHHHHHE----SEEEES-----SH-HHHHHGGGGT--EEECSSS-S-HHHHHTTS-EEEET
T ss_pred cc---CCEEEECCCCHHHHHHHHhcc----eEEEEc-----Cc-cHHHHHHHhCCeEEEecCCCCCHHHHhhcc-eEEeC
Confidence 55 389999999999999999999 887632 44 566 99999999999854 44455555444 44565
Q ss_pred CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Q 002660 455 PHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRI 502 (895)
Q Consensus 455 p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~ 502 (895)
.|.+++.++|.+++.+++.+..+.. ....|--...++++.+++
T Consensus 303 -~~~~~I~~ai~~~l~~~~~~~~~~~----~~npYgdG~as~rI~~~L 345 (346)
T PF02350_consen 303 -TDPEAIIQAIEKALSDKDFYRKLKN----RPNPYGDGNASERIVEIL 345 (346)
T ss_dssp -SSHHHHHHHHHHHHH-HHHHHHHHC----S--TT-SS-HHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHhChHHHHhhcc----CCCCCCCCcHHHHHHHhh
Confidence 7999999999999988554443221 112454455555655554
No 175
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.95 E-value=7.2e-05 Score=84.12 Aligned_cols=187 Identities=12% Similarity=0.063 Sum_probs=118.4
Q ss_pred chhHHhhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhc
Q 002660 299 PIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY 378 (895)
Q Consensus 299 ~~~~~~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~ 378 (895)
.....+..++++.+..++++..++ .|=-+..++++.++.+.- |+-+|++...+.. -...+.+.+.+.
T Consensus 271 ~v~~~R~~~gLp~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~v--P~S~L~L~~~~~~---------~~~~l~~~~~~~ 337 (468)
T PF13844_consen 271 IVVTTRAQYGLPEDAVVFGSFNNL--FKISPETLDLWARILKAV--PNSRLWLLRFPAS---------GEARLRRRFAAH 337 (468)
T ss_dssp EEEEETGGGT--SSSEEEEE-S-G--GG--HHHHHHHHHHHHHS--TTEEEEEEETSTT---------HHHHHHHHHHHT
T ss_pred ccccCHHHcCCCCCceEEEecCcc--ccCCHHHHHHHHHHHHhC--CCcEEEEeeCCHH---------HHHHHHHHHHHc
Confidence 335667788888888777777775 576788888888886434 4444443333211 125677788888
Q ss_pred CCCC-cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchh-----cccc-CCCeE
Q 002660 379 DLYG-QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVD-----IHRV-LDNGL 451 (895)
Q Consensus 379 ~l~~-~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~e-----iv~~-~~~g~ 451 (895)
|+.. ++.|.+..+.++....|+.+ ||++=|. .-+-+.+.+||+.+|+|||+-.-..... ++.. |-..+
T Consensus 338 Gv~~~Ri~f~~~~~~~ehl~~~~~~----DI~LDT~-p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~El 412 (468)
T PF13844_consen 338 GVDPDRIIFSPVAPREEHLRRYQLA----DICLDTF-PYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPEL 412 (468)
T ss_dssp TS-GGGEEEEE---HHHHHHHGGG-----SEEE--S-SS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGG
T ss_pred CCChhhEEEcCCCCHHHHHHHhhhC----CEEeeCC-CCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchh
Confidence 8874 69998888888888888889 9999773 3345689999999999999854222221 2221 11233
Q ss_pred EeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-h--cCCHHHHHHHHHHHHHcc
Q 002660 452 LVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI-H--LFSWPEHCKTYLSRIAGC 505 (895)
Q Consensus 452 lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~-~--~~s~~~~a~~~~~~~~~~ 505 (895)
+.. |.++..+.-.++.+|++.++++++..++.. + -|+-..+++.+.+.|+.+
T Consensus 413 IA~--s~~eYv~~Av~La~D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~m 467 (468)
T PF13844_consen 413 IAD--SEEEYVEIAVRLATDPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQM 467 (468)
T ss_dssp B-S--SHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHH
T ss_pred cCC--CHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHh
Confidence 443 789999999999999999999999998877 3 699999999999998753
No 176
>PRK10444 UMP phosphatase; Provisional
Probab=97.84 E-value=0.00025 Score=74.55 Aligned_cols=64 Identities=6% Similarity=0.092 Sum_probs=48.9
Q ss_pred eEEEEEecCCC--CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHH---HHhCCCCCCCCCEEEEcC
Q 002660 613 HIFVISVDCDS--TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSF---LVSGHLSPSDFDAFICNS 681 (895)
Q Consensus 613 kli~~DiDGTL--~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~---l~~l~l~~~~~d~~I~~n 681 (895)
|+++||+|||| ...+.+.+.+++++|+++ |+.|+++|+|+.....++ +..+|++. .++-++++.
T Consensus 2 ~~v~~DlDGtL~~~~~~~p~a~~~l~~L~~~----g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~-~~~~i~ts~ 70 (248)
T PRK10444 2 KNVICDIDGVLMHDNVAVPGAAEFLHRILDK----GLPLVLLTNYPSQTGQDLANRFATAGVDV-PDSVFYTSA 70 (248)
T ss_pred cEEEEeCCCceEeCCeeCccHHHHHHHHHHC----CCeEEEEeCCCCCCHHHHHHHHHHcCCCC-CHhhEecHH
Confidence 68999999999 356778889999999998 599999999988665544 55567753 345566553
No 177
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=97.80 E-value=4e-05 Score=76.38 Aligned_cols=185 Identities=13% Similarity=0.103 Sum_probs=92.3
Q ss_pred HHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHH-hCCCCCCCCCEEEEcCCceEeeccCCCCCCCcccchhhHHHhhcc
Q 002660 632 KKICEAVEKERTEGSIGFILSTSMTISEIHSFLV-SGHLSPSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYR 710 (895)
Q Consensus 632 ~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~-~l~l~~~~~d~~I~~nGa~I~~~~~~~~~~~~~~~~~~~~~i~~~ 710 (895)
.++|++|++. +.|+|+||-.+.-+.+-+. .--+ ..+|++-+.||...|..+ .......+..++...
T Consensus 2 ~~~L~~L~~~-----~~vgvVgGsd~~k~~eQl~~~~~~--~~fdy~f~enG~~~y~~~------~~~~~~~~~~~lgee 68 (220)
T PF03332_consen 2 AELLQKLRKK-----VPVGVVGGSDLPKIQEQLGGDDVL--DNFDYVFPENGLVAYKNG------ELIWSQSIAEFLGEE 68 (220)
T ss_dssp HHHHHHHHTT-----SEEEEEESS-HHHHHHHHSTTTHH--HH-SEEEEGGGTEEEETT------EEEEE--HHHHHHHH
T ss_pred HHHHHHHHhc-----CeEEEEcchhHHHHHHHHcccchH--hhCCeeecCCCCeEEECC------CchhhHhHHHHcCHH
Confidence 4677788875 9999999999988877663 2112 236899999999998765 222222233333321
Q ss_pred cCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEEE--eeCCCCC------------ccHHHHHHHHHhccC
Q 002660 711 WGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFS--VQKPGMT------------PPVKELRKVLRIQAL 776 (895)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~--~~~~~~~------------~~~~~l~~~l~~~~~ 776 (895)
-..+.+..++..........+ ...+.|.- .-.+.+. -+..... ...+.+.+.|.....
T Consensus 69 ~~~~~in~~l~~~~~l~lp~k----rGtfIE~R----~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~ 140 (220)
T PF03332_consen 69 KLQKLINFCLRYISDLDLPVK----RGTFIEFR----GGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKKEFP 140 (220)
T ss_dssp HHHHHHHHHHHHHHT---S-------S-SEEEE----SSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhCCCCcc----CCCceeec----CCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCC
Confidence 111112222211112111111 11111111 0111111 0100000 001233444554444
Q ss_pred eEEEEEe-cCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecC----CCCCCccccccCcc-eEEEecC
Q 002660 777 RCHVIYC-QNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGE----SGDTDYEGLLGGVH-KTVILKG 843 (895)
Q Consensus 777 ~~~~~~s-~~~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd----~nn~D~~eMl~~ag-~gVaMgN 843 (895)
.+.+.++ .+...+||.|+|.+|..+|++|.+.. .+ -|.|+|| .+| | .|.+...+ .|+.+.|
T Consensus 141 d~~L~~siGGqiSiDvfp~GwDKty~Lr~l~~~~---~~-~I~FfGDkt~pGGN-D-yei~~~~rt~g~~V~~ 207 (220)
T PF03332_consen 141 DFGLTFSIGGQISIDVFPKGWDKTYCLRHLEDEG---FD-EIHFFGDKTFPGGN-D-YEIFEDPRTIGHTVTS 207 (220)
T ss_dssp CCSEEEEEETTTEEEEEETT-SGGGGGGGTTTTT----S-EEEEEESS-STTST-T-HHHHHSTTSEEEE-SS
T ss_pred CCceEEecCCceEEccccCCccHHHHHHHHHhcc---cc-eEEEEehhccCCCC-C-ceeeecCCccEEEeCC
Confidence 4333333 33348999999999999999997743 33 5666777 467 7 89987654 4777654
No 178
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.79 E-value=6.6e-05 Score=78.52 Aligned_cols=74 Identities=14% Similarity=0.084 Sum_probs=57.4
Q ss_pred cccCeEEEEEecCCCC---cch---hHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCC
Q 002660 609 RRRKHIFVISVDCDST---TGL---LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSG 682 (895)
Q Consensus 609 ~~~~kli~~DiDGTL~---~~~---~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nG 682 (895)
....|+|+||+||||. ..+ .+.+.++|++|+++ |+.++|+|+.+...+...++.+++. ..+|. |.++|
T Consensus 125 ~~~~~~i~~D~D~TL~~~~~~v~irdp~V~EtL~eLkek----GikLaIvTNg~Re~v~~~Le~lgL~-~yFDv-II~~g 198 (303)
T PHA03398 125 WEIPHVIVFDLDSTLITDEEPVRIRDPFVYDSLDELKER----GCVLVLWSYGNREHVVHSLKETKLE-GYFDI-IICGG 198 (303)
T ss_pred eeeccEEEEecCCCccCCCCccccCChhHHHHHHHHHHC----CCEEEEEcCCChHHHHHHHHHcCCC-ccccE-EEECC
Confidence 3467899999999992 333 57899999999998 5999999988888889999999995 23444 55566
Q ss_pred ceEeec
Q 002660 683 SDLYYS 688 (895)
Q Consensus 683 a~I~~~ 688 (895)
......
T Consensus 199 ~i~~k~ 204 (303)
T PHA03398 199 RKAGEY 204 (303)
T ss_pred Cccccc
Confidence 665543
No 179
>PLN02208 glycosyltransferase family protein
Probab=97.78 E-value=0.046 Score=62.54 Aligned_cols=112 Identities=13% Similarity=0.078 Sum_probs=67.3
Q ss_pred cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCC----chhcc-ccCCCeEEeCC--
Q 002660 383 QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIH-RVLDNGLLVDP-- 455 (895)
Q Consensus 383 ~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg----~~eiv-~~~~~g~lv~p-- 455 (895)
++.+.++.|+.+ +++.. +..+|| + -+--++++||+++|+|+|+-..-+ ...++ ...+.|+.++.
T Consensus 312 g~~v~~W~PQ~~---iL~H~--~v~~Fv-t---HcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~ 382 (442)
T PLN02208 312 GVVWGGWVQQPL---ILDHP--SIGCFV-N---HCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREK 382 (442)
T ss_pred CcEeeccCCHHH---HhcCC--ccCeEE-c---cCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEecccc
Confidence 566778988765 55555 112344 2 133368899999999999976533 22222 22456777753
Q ss_pred ---CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHh----hcCCHHHHHHHHHHHHH
Q 002660 456 ---HDQQSVADALLKLVADK-QLWARCRQNGLKNI----HLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 456 ---~d~~~la~ai~~ll~~~-~~~~~~~~~~~~~~----~~~s~~~~a~~~~~~~~ 503 (895)
-+.++++++|.++++++ +..+++++++++.- +.=|.....++|++.+.
T Consensus 383 ~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~~~gsS~~~l~~~v~~l~ 438 (442)
T PLN02208 383 TGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILVSPGLLTGYVDKFVEELQ 438 (442)
T ss_pred CCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 36789999999999765 34445555444332 22344444555555544
No 180
>PLN03007 UDP-glucosyltransferase family protein
Probab=97.76 E-value=0.022 Score=66.17 Aligned_cols=169 Identities=12% Similarity=0.142 Sum_probs=89.0
Q ss_pred CCcEEEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCC
Q 002660 312 RKPVILALARPDP--KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKH 389 (895)
Q Consensus 312 ~~~~il~vgrl~~--~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~ 389 (895)
...+.++.|.... .+.+..+.++++.+. .++.++++......... ..+-+...+... ..++.+.++
T Consensus 285 ~svvyvsfGS~~~~~~~~~~~~~~~l~~~~-----~~flw~~~~~~~~~~~~---~~lp~~~~~r~~----~~g~~v~~w 352 (482)
T PLN03007 285 DSVIYLSFGSVASFKNEQLFEIAAGLEGSG-----QNFIWVVRKNENQGEKE---EWLPEGFEERTK----GKGLIIRGW 352 (482)
T ss_pred CceEEEeecCCcCCCHHHHHHHHHHHHHCC-----CCEEEEEecCCcccchh---hcCCHHHHHHhc----cCCEEEecC
Confidence 4567888888643 344555556655542 24544566421110000 000011111111 346888899
Q ss_pred CCCCCHHHHHHHhhcCCcE--EEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhc----cc-cCCCeEEe--------C
Q 002660 390 HKQSDVPEIYRLAAKTKGV--FINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDI----HR-VLDNGLLV--------D 454 (895)
Q Consensus 390 ~~~~el~~ly~~A~~~~dv--~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~ei----v~-~~~~g~lv--------~ 454 (895)
+|+. .++..+ ++ ||.= -| -.+++||+++|+|+|+....+-+-. +. .-..|+-+ +
T Consensus 353 ~PQ~---~iL~h~----~v~~fvtH---~G-~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~ 421 (482)
T PLN03007 353 APQV---LILDHQ----ATGGFVTH---CG-WNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVK 421 (482)
T ss_pred CCHH---HHhccC----ccceeeec---Cc-chHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccccc
Confidence 8875 566666 44 4422 23 4588999999999999765432221 11 11233332 1
Q ss_pred --CCCHHHHHHHHHHHHhCHH------HHHHHHHHHHHHhh--cCCHHHHHHHHHHHHHc
Q 002660 455 --PHDQQSVADALLKLVADKQ------LWARCRQNGLKNIH--LFSWPEHCKTYLSRIAG 504 (895)
Q Consensus 455 --p~d~~~la~ai~~ll~~~~------~~~~~~~~~~~~~~--~~s~~~~a~~~~~~~~~ 504 (895)
.-+.+++++++++++.+++ ..+++++.+++.+. -.|+.. .++|++.+.+
T Consensus 422 ~~~~~~~~l~~av~~~m~~~~~~~~r~~a~~~~~~a~~a~~~gGsS~~~-l~~~v~~~~~ 480 (482)
T PLN03007 422 GDFISREKVEKAVREVIVGEEAEERRLRAKKLAEMAKAAVEEGGSSFND-LNKFMEELNS 480 (482)
T ss_pred cCcccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhCCCcHHHH-HHHHHHHHHh
Confidence 1367899999999998752 22334444444442 244444 3555555543
No 181
>PLN02562 UDP-glycosyltransferase
Probab=97.69 E-value=0.032 Score=64.09 Aligned_cols=139 Identities=13% Similarity=0.126 Sum_probs=81.2
Q ss_pred CCcEEEEEeCCC---CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCC
Q 002660 312 RKPVILALARPD---PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPK 388 (895)
Q Consensus 312 ~~~~il~vgrl~---~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g 388 (895)
+..++++.|... ..+-+..++.+++.+. . .+..++..+.. +.+. . ...++ ..+++.+.+
T Consensus 273 ~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g----~-~fiW~~~~~~~-~~l~-------~---~~~~~--~~~~~~v~~ 334 (448)
T PLN02562 273 NSVIYISFGSWVSPIGESNVRTLALALEASG----R-PFIWVLNPVWR-EGLP-------P---GYVER--VSKQGKVVS 334 (448)
T ss_pred CceEEEEecccccCCCHHHHHHHHHHHHHCC----C-CEEEEEcCCch-hhCC-------H---HHHHH--hccCEEEEe
Confidence 346788888853 4455677777777663 1 33234432210 0111 0 11111 135677778
Q ss_pred CCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCc----hhcccc-CCCeEEeCCCCHHHHHH
Q 002660 389 HHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP----VDIHRV-LDNGLLVDPHDQQSVAD 463 (895)
Q Consensus 389 ~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~----~eiv~~-~~~g~lv~p~d~~~la~ 463 (895)
++|+.+ ++...+ ..+||. -+--.+.+||+.+|+|+|+....+- ...+.+ .+.|+-+...+.+++++
T Consensus 335 w~PQ~~---iL~h~~--v~~fvt----H~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~l~~ 405 (448)
T PLN02562 335 WAPQLE---VLKHQA--VGCYLT----HCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGFGQKEVEE 405 (448)
T ss_pred cCCHHH---HhCCCc--cceEEe----cCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeCCCCHHHHHH
Confidence 988764 555540 024442 2335788999999999999765332 223322 35566665568899999
Q ss_pred HHHHHHhCHHHHHH
Q 002660 464 ALLKLVADKQLWAR 477 (895)
Q Consensus 464 ai~~ll~~~~~~~~ 477 (895)
+|++++++++.+++
T Consensus 406 ~v~~~l~~~~~r~~ 419 (448)
T PLN02562 406 GLRKVMEDSGMGER 419 (448)
T ss_pred HHHHHhCCHHHHHH
Confidence 99999988654443
No 182
>PLN02670 transferase, transferring glycosyl groups
Probab=97.65 E-value=0.06 Score=61.98 Aligned_cols=113 Identities=12% Similarity=0.043 Sum_probs=71.9
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCC----chhccccCCCeEEeCC----
Q 002660 384 VAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHRVLDNGLLVDP---- 455 (895)
Q Consensus 384 v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg----~~eiv~~~~~g~lv~p---- 455 (895)
+.+.+++|+.+ ++...+ ...||.- +--++++||+++|+|+|+....+ ....+...+.|+.++.
T Consensus 341 ~vv~~W~PQ~~---IL~H~~--v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~ 411 (472)
T PLN02670 341 MIHVGWVPQVK---ILSHES--VGGFLTH----CGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERD 411 (472)
T ss_pred eEEeCcCCHHH---HhcCcc--cceeeec----CCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccC
Confidence 66678988764 555540 1235422 34468999999999999976533 2233444567877753
Q ss_pred --CCHHHHHHHHHHHHhCHHHHHHHHHHHHHH---h-hcCCHHHHHHHHHHHHHccc
Q 002660 456 --HDQQSVADALLKLVADKQLWARCRQNGLKN---I-HLFSWPEHCKTYLSRIAGCK 506 (895)
Q Consensus 456 --~d~~~la~ai~~ll~~~~~~~~~~~~~~~~---~-~~~s~~~~a~~~~~~~~~~~ 506 (895)
-+.+++.++|.+++.+++ -..+++++++. + ..=.....++.+++.+.+..
T Consensus 412 ~~~~~e~i~~av~~vm~~~~-g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~~ 467 (472)
T PLN02670 412 GSFTSDSVAESVRLAMVDDA-GEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLRENR 467 (472)
T ss_pred CcCcHHHHHHHHHHHhcCcc-hHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHhc
Confidence 358899999999998752 12333333333 3 35566777777777777654
No 183
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=97.64 E-value=0.0037 Score=64.24 Aligned_cols=140 Identities=20% Similarity=0.330 Sum_probs=85.9
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCC
Q 002660 311 PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHH 390 (895)
Q Consensus 311 ~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~ 390 (895)
+.+.++++.|.-|+ ||+ .++.++.+. +...++.+|+|..... ...+.+.++ ..+++.++-.
T Consensus 157 ~~r~ilI~lGGsDp-k~l--t~kvl~~L~--~~~~nl~iV~gs~~p~----------l~~l~k~~~---~~~~i~~~~~- 217 (318)
T COG3980 157 PKRDILITLGGSDP-KNL--TLKVLAELE--QKNVNLHIVVGSSNPT----------LKNLRKRAE---KYPNINLYID- 217 (318)
T ss_pred chheEEEEccCCCh-hhh--HHHHHHHhh--ccCeeEEEEecCCCcc----------hhHHHHHHh---hCCCeeeEec-
Confidence 34557888887666 554 455666664 2335888889965421 233444444 3467766655
Q ss_pred CCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCC--EEE--cCCCCchhccccCCCeEEeCC---CCHHHHHH
Q 002660 391 KQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLP--IVA--TKNGGPVDIHRVLDNGLLVDP---HDQQSVAD 463 (895)
Q Consensus 391 ~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~P--Vva--s~~gg~~eiv~~~~~g~lv~p---~d~~~la~ 463 (895)
.++|+.|+..| |.++.. -|.++.|++..|+| +|+ .+--.....++ .-|+..+- ........
T Consensus 218 -~~dma~LMke~----d~aI~A-----aGstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~--~lg~~~~l~~~l~~~~~~~ 285 (318)
T COG3980 218 -TNDMAELMKEA----DLAISA-----AGSTLYEALLLGVPSLVLPLAENQIATAKEFE--ALGIIKQLGYHLKDLAKDY 285 (318)
T ss_pred -chhHHHHHHhc----chheec-----cchHHHHHHHhcCCceEEeeeccHHHHHHHHH--hcCchhhccCCCchHHHHH
Confidence 67899999999 998865 68999999999999 333 33222111111 12322222 24466777
Q ss_pred HHHHHHhCHHHHHHHHHH
Q 002660 464 ALLKLVADKQLWARCRQN 481 (895)
Q Consensus 464 ai~~ll~~~~~~~~~~~~ 481 (895)
.+.++..|+..+..+...
T Consensus 286 ~~~~i~~d~~~rk~l~~~ 303 (318)
T COG3980 286 EILQIQKDYARRKNLSFG 303 (318)
T ss_pred HHHHhhhCHHHhhhhhhc
Confidence 788888888766655443
No 184
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=97.64 E-value=0.00046 Score=71.39 Aligned_cols=43 Identities=16% Similarity=0.310 Sum_probs=39.1
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEec
Q 002660 797 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 842 (895)
Q Consensus 797 sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMg 842 (895)
.|...++.++++++++++++++ +||+.+ | ++|.+.+|.+|+|+
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~i~-iGDs~~-D-i~aa~~ag~~i~~~ 194 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPENTVA-VGDGAN-D-LSMIKAAGLGIAFN 194 (219)
T ss_pred ccHHHHHHHHHHcCCCHHHEEE-EECCHH-H-HHHHHhCCCeEEeC
Confidence 4899999999999999999998 677776 8 99999999999995
No 185
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=97.61 E-value=0.1 Score=59.41 Aligned_cols=91 Identities=10% Similarity=0.088 Sum_probs=58.2
Q ss_pred CCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCC-CCchhccccCC-CeEEeCC--CCHHHHH
Q 002660 387 PKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN-GGPVDIHRVLD-NGLLVDP--HDQQSVA 462 (895)
Q Consensus 387 ~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~-gg~~eiv~~~~-~g~lv~p--~d~~~la 462 (895)
....+..++..+++.+ |++|-.-+ =.++=|++.|+|+|+-.. .-...++.+-+ ..++++. .+.+++.
T Consensus 313 ~~~~~~~e~~~iIs~~----dl~ig~Rl-----Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~lg~~~~~~~~~~l~~~~Li 383 (426)
T PRK10017 313 MDELNDLEMGKILGAC----ELTVGTRL-----HSAIISMNFGTPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQ 383 (426)
T ss_pred cCCCChHHHHHHHhhC----CEEEEecc-----hHHHHHHHcCCCEEEeeehHHHHHHHHHcCCccEEechhhCCHHHHH
Confidence 4444556888999999 99875432 257889999999998542 22233333222 2344443 4567899
Q ss_pred HHHHHHHhCHHHHHHHHHHHHHHh
Q 002660 463 DALLKLVADKQLWARCRQNGLKNI 486 (895)
Q Consensus 463 ~ai~~ll~~~~~~~~~~~~~~~~~ 486 (895)
+.+.+++++.+..++.-+......
T Consensus 384 ~~v~~~~~~r~~~~~~l~~~v~~~ 407 (426)
T PRK10017 384 AMVADTLGQLPALNARLAEAVSRE 407 (426)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHH
Confidence 999999999877665444443333
No 186
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=97.54 E-value=0.0033 Score=70.68 Aligned_cols=182 Identities=14% Similarity=0.123 Sum_probs=123.3
Q ss_pred hhhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCccccccchHHHHHHHHHHHHhcCCCC
Q 002660 304 IMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYG 382 (895)
Q Consensus 304 ~~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~ 382 (895)
+...+++++..++++.++ +.|-.+.++.-.-++. +.-|+-+| +.|.+++ +++...+++++++.|+..
T Consensus 421 R~~lglp~~avVf~c~~n--~~K~~pev~~~wmqIL--~~vP~Svl~L~~~~~~--------~~~~~~l~~la~~~Gv~~ 488 (620)
T COG3914 421 RAQLGLPEDAVVFCCFNN--YFKITPEVFALWMQIL--SAVPNSVLLLKAGGDD--------AEINARLRDLAEREGVDS 488 (620)
T ss_pred hhhcCCCCCeEEEEecCC--cccCCHHHHHHHHHHH--HhCCCcEEEEecCCCc--------HHHHHHHHHHHHHcCCCh
Confidence 344566666666666665 4666566666665554 34454444 5565543 567899999999999864
Q ss_pred -cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEc-------CCCCchhcccc-CCCeEEe
Q 002660 383 -QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVAT-------KNGGPVDIHRV-LDNGLLV 453 (895)
Q Consensus 383 -~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas-------~~gg~~eiv~~-~~~g~lv 453 (895)
+..|.+..+.++..+.|..| |+++=|- .-|-..+.+|++.+|+|||+- ..|+. ++.. |-..+++
T Consensus 489 eRL~f~p~~~~~~h~a~~~iA----DlvLDTy-PY~g~TTa~daLwm~vPVlT~~G~~FasR~~~s--i~~~agi~e~vA 561 (620)
T COG3914 489 ERLRFLPPAPNEDHRARYGIA----DLVLDTY-PYGGHTTASDALWMGVPVLTRVGEQFASRNGAS--IATNAGIPELVA 561 (620)
T ss_pred hheeecCCCCCHHHHHhhchh----heeeecc-cCCCccchHHHHHhcCceeeeccHHHHHhhhHH--HHHhcCCchhhc
Confidence 79999999999999999999 9988652 234457999999999999973 23332 2222 1122333
Q ss_pred CCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-h--cCCHHHHHHHHHHHHHccc
Q 002660 454 DPHDQQSVADALLKLVADKQLWARCRQNGLKNI-H--LFSWPEHCKTYLSRIAGCK 506 (895)
Q Consensus 454 ~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~-~--~~s~~~~a~~~~~~~~~~~ 506 (895)
+ +.++..+.-..+-.|...+++.+..-.+.. . -|+.+..++++..+|.++-
T Consensus 562 ~--s~~dYV~~av~~g~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~M~ 615 (620)
T COG3914 562 D--SRADYVEKAVAFGSDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWGMW 615 (620)
T ss_pred C--CHHHHHHHHHHhcccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHHHH
Confidence 3 555555544455557767777666666555 2 6999999999999998764
No 187
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=97.52 E-value=0.015 Score=61.32 Aligned_cols=170 Identities=14% Similarity=0.052 Sum_probs=108.6
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEE--EecCCCccccccchHHHHHHHHHHHHhcCCCCc-EEeCCC
Q 002660 313 KPVILALARPDPKKNITTLVKAFGECRPLRELANLTLI--MGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQ-VAYPKH 389 (895)
Q Consensus 313 ~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~li--vG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~-v~~~g~ 389 (895)
+..|+---+-|+.-+....|+++.+.. . .++.++ +|-+. +.++|.+++.+...++--.++ ..+...
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~--~--~~v~ii~PlsYp~-------gn~~Yi~~V~~~~~~lF~~~~~~~L~e~ 214 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQF--G--DNVKIIVPMGYPA-------NNQAYIEEVRQAGLALFGAENFQILTEK 214 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHh--C--CCeEEEEECCcCC-------CCHHHHHHHHHHHHHhcCcccEEehhhh
Confidence 334444445678888888888887764 2 345444 45422 246788888888888765445 456789
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecC-CCCCCchHHHHHHHcCCCEEEcC-CCCchhccccCCCeEEeCCCCHHHHHHHHHH
Q 002660 390 HKQSDVPEIYRLAAKTKGVFINPA-FIEPFGLTLIEAAAHGLPIVATK-NGGPVDIHRVLDNGLLVDPHDQQSVADALLK 467 (895)
Q Consensus 390 ~~~~el~~ly~~A~~~~dv~v~ps-~~Eg~gl~~~Ea~a~G~PVvas~-~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ 467 (895)
+|.+|..++++.+ |+.++-- +..|+|..++ .+..|+||+.+. +.--.++.+.+ --++++.++. -.++.
T Consensus 215 l~f~eYl~lL~~~----Dl~~f~~~RQQgiGnl~l-Li~~G~~v~l~r~n~fwqdl~e~g-v~Vlf~~d~L---~~~~v- 284 (322)
T PRK02797 215 LPFDDYLALLRQC----DLGYFIFARQQGIGTLCL-LIQLGKPVVLSRDNPFWQDLTEQG-LPVLFTGDDL---DEDIV- 284 (322)
T ss_pred CCHHHHHHHHHhC----CEEEEeechhhHHhHHHH-HHHCCCcEEEecCCchHHHHHhCC-CeEEecCCcc---cHHHH-
Confidence 9999999999999 9988775 5678886544 678899998875 55556654433 2334443332 11111
Q ss_pred HHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccCC
Q 002660 468 LVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPR 508 (895)
Q Consensus 468 ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~~~~~ 508 (895)
.+..+++...-++.+. |+-+...+.+.++++.....
T Consensus 285 ----~e~~rql~~~dk~~I~-Ff~pn~~~~W~~~l~~~~g~ 320 (322)
T PRK02797 285 ----REAQRQLASVDKNIIA-FFSPNYLQGWRNALAIAAGE 320 (322)
T ss_pred ----HHHHHHHHhhCcceee-ecCHhHHHHHHHHHHHhhCC
Confidence 1112222222233333 99999999999998876543
No 188
>PLN02173 UDP-glucosyl transferase family protein
Probab=97.37 E-value=0.28 Score=56.19 Aligned_cols=82 Identities=13% Similarity=0.155 Sum_probs=53.9
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCC----chhccccC-CCeEEeCC-
Q 002660 382 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHRVL-DNGLLVDP- 455 (895)
Q Consensus 382 ~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg----~~eiv~~~-~~g~lv~p- 455 (895)
+++.+.++.|+.+ ++... +..+||. -+-.++++|++++|+|+|+-..-+ ...++.+. +.|+-+..
T Consensus 317 ~~~~i~~W~PQ~~---iL~H~--~v~~Fvt----HcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~ 387 (449)
T PLN02173 317 DKSLVLKWSPQLQ---VLSNK--AIGCFMT----HCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAE 387 (449)
T ss_pred CceEEeCCCCHHH---HhCCC--ccceEEe----cCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeec
Confidence 4677789988654 55555 1134442 244578999999999999976433 22233332 45665532
Q ss_pred -----CCHHHHHHHHHHHHhCH
Q 002660 456 -----HDQQSVADALLKLVADK 472 (895)
Q Consensus 456 -----~d~~~la~ai~~ll~~~ 472 (895)
-+.+++++++++++.++
T Consensus 388 ~~~~~~~~e~v~~av~~vm~~~ 409 (449)
T PLN02173 388 KESGIAKREEIEFSIKEVMEGE 409 (449)
T ss_pred ccCCcccHHHHHHHHHHHhcCC
Confidence 16799999999999764
No 189
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=97.36 E-value=0.17 Score=58.43 Aligned_cols=116 Identities=13% Similarity=0.080 Sum_probs=71.4
Q ss_pred cEEeCCCCCCCCHHHHHHHhhcCCcE--EEecCCCCCCchHHHHHHHcCCCEEEcCCCCc----hhcc-ccCCCeEEeCC
Q 002660 383 QVAYPKHHKQSDVPEIYRLAAKTKGV--FINPAFIEPFGLTLIEAAAHGLPIVATKNGGP----VDIH-RVLDNGLLVDP 455 (895)
Q Consensus 383 ~v~~~g~~~~~el~~ly~~A~~~~dv--~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~----~eiv-~~~~~g~lv~p 455 (895)
.+.+.+++|+.+ ++... .+ ||. -+--++.+||+.+|+|+|+-...+- ...+ +..+.|+.++.
T Consensus 339 g~vv~~W~PQ~~---iL~h~----~vg~Fit----H~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~ 407 (481)
T PLN02992 339 GFVVPSWAPQAE---ILAHQ----AVGGFLT----HCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDD 407 (481)
T ss_pred CEEEeecCCHHH---HhCCc----ccCeeEe----cCchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecC
Confidence 577889988765 55555 33 442 2344688999999999999775432 2233 24456777643
Q ss_pred ----CCHHHHHHHHHHHHhCHH------HHHHHHHHHHHHhh---cCCHHHHHHHHHHHHHcccCCC
Q 002660 456 ----HDQQSVADALLKLVADKQ------LWARCRQNGLKNIH---LFSWPEHCKTYLSRIAGCKPRH 509 (895)
Q Consensus 456 ----~d~~~la~ai~~ll~~~~------~~~~~~~~~~~~~~---~~s~~~~a~~~~~~~~~~~~~~ 509 (895)
-+.++++++|.+++.+++ ..+++++.+++.+. -=|.....++|++.+.+.+++-
T Consensus 408 ~~~~~~~~~l~~av~~vm~~~~g~~~r~~a~~~~~~a~~Av~~~~GGSS~~~l~~~v~~~~~~~~~~ 474 (481)
T PLN02992 408 PKEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDGGGVAHESLCRVTKECQRFLERV 474 (481)
T ss_pred CCCcccHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHH
Confidence 477899999999997632 22344444444441 1233444566666666655543
No 190
>PRK10671 copA copper exporting ATPase; Provisional
Probab=97.35 E-value=0.00086 Score=83.42 Aligned_cols=54 Identities=9% Similarity=0.122 Sum_probs=46.0
Q ss_pred CeEEEEEecCCC------CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 612 KHIFVISVDCDS------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 612 ~kli~~DiDGTL------~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
...+++..||++ .....+..+++++.|++. |+.++++||.+...+..+++++|+
T Consensus 630 ~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L~~~----gi~v~~~Tgd~~~~a~~ia~~lgi 689 (834)
T PRK10671 630 ATPVLLAVDGKAAALLAIRDPLRSDSVAALQRLHKA----GYRLVMLTGDNPTTANAIAKEAGI 689 (834)
T ss_pred CeEEEEEECCEEEEEEEccCcchhhHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHcCC
Confidence 457788888886 356677788999999887 599999999999999999999887
No 191
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=97.33 E-value=0.25 Score=56.74 Aligned_cols=83 Identities=17% Similarity=0.278 Sum_probs=53.7
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCc----hhccccC-CCeEEe-CC
Q 002660 382 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP----VDIHRVL-DNGLLV-DP 455 (895)
Q Consensus 382 ~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~----~eiv~~~-~~g~lv-~p 455 (895)
++..+.+++|+.+ ++... +.++||.- -|+ .+++||+++|+|+|+....+- ...+.+. +.|+.+ ..
T Consensus 324 ~~g~v~~w~PQ~~---iL~h~--~v~~fvtH---~G~-nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~ 394 (451)
T PLN02410 324 GRGYIVKWAPQKE---VLSHP--AVGGFWSH---CGW-NSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGD 394 (451)
T ss_pred CCeEEEccCCHHH---HhCCC--ccCeeeec---Cch-hHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCCc
Confidence 4556668988765 55553 01446533 233 588999999999999765332 2222222 566665 33
Q ss_pred CCHHHHHHHHHHHHhCHH
Q 002660 456 HDQQSVADALLKLVADKQ 473 (895)
Q Consensus 456 ~d~~~la~ai~~ll~~~~ 473 (895)
-+.++++++|++++.+++
T Consensus 395 ~~~~~v~~av~~lm~~~~ 412 (451)
T PLN02410 395 LDRGAVERAVKRLMVEEE 412 (451)
T ss_pred ccHHHHHHHHHHHHcCCc
Confidence 477899999999998653
No 192
>PLN02210 UDP-glucosyl transferase
Probab=97.29 E-value=0.35 Score=55.75 Aligned_cols=109 Identities=14% Similarity=0.089 Sum_probs=64.4
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCc----hhcccc-CCCeEEeCC---
Q 002660 384 VAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP----VDIHRV-LDNGLLVDP--- 455 (895)
Q Consensus 384 v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~----~eiv~~-~~~g~lv~p--- 455 (895)
..+.++.|+. .+++.++ .++||.= -|+ .+.+|++.+|+|+|+-...+- ...+.+ -+.|+.++.
T Consensus 326 g~v~~w~PQ~---~iL~h~~--vg~FitH---~G~-nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~ 396 (456)
T PLN02210 326 GVVLEWSPQE---KILSHMA--ISCFVTH---CGW-NSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAV 396 (456)
T ss_pred eEEEecCCHH---HHhcCcC--cCeEEee---CCc-ccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEecccc
Confidence 3456888775 4666661 1255422 233 478899999999999765432 223333 467777642
Q ss_pred ---CCHHHHHHHHHHHHhCHH------HHHHHHHHHHHHh-hcCCHHHHHHHHHHH
Q 002660 456 ---HDQQSVADALLKLVADKQ------LWARCRQNGLKNI-HLFSWPEHCKTYLSR 501 (895)
Q Consensus 456 ---~d~~~la~ai~~ll~~~~------~~~~~~~~~~~~~-~~~s~~~~a~~~~~~ 501 (895)
-+.+++++++++++.+++ ..+++++.+++.+ +-=|...-.++|++.
T Consensus 397 ~~~~~~~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v~~ 452 (456)
T PLN02210 397 DGELKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALAPGGSSARNLDLFISD 452 (456)
T ss_pred CCcCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 367899999999997643 2233444455544 223333334444443
No 193
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=97.26 E-value=0.0015 Score=63.73 Aligned_cols=148 Identities=14% Similarity=0.196 Sum_probs=72.7
Q ss_pred CCeEEEecCCCCCCcccccccCCCChHHHHHHHHHH--HHHhhhhhhcccCCCCCCCCcEEEecc-ccchhHHHHHhccC
Q 002660 90 SGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNH--IIRMSNVLGEQIGGGKPVWPVAIHGHY-ADAGDSAALLSGAL 166 (895)
Q Consensus 90 ~gv~i~~i~~~~~~~~~~~~~~~~~l~~f~~~~~~~--~~~~~~~l~~~~~~~~~~~pDvVh~h~-~~~~~~~~~~~~~~ 166 (895)
+||++++...... .....-+++..|...+.+. ..+.+..|++ +++.||||.+|. |-.++ .+....
T Consensus 19 ~GV~~~~y~~~~~----~~~~~~~~~~~~e~~~~rg~av~~a~~~L~~-----~Gf~PDvI~~H~GWGe~L---flkdv~ 86 (171)
T PF12000_consen 19 PGVRVVRYRPPRG----PTPGTHPYVRDFEAAVLRGQAVARAARQLRA-----QGFVPDVIIAHPGWGETL---FLKDVF 86 (171)
T ss_pred CCcEEEEeCCCCC----CCCCCCcccccHHHHHHHHHHHHHHHHHHHH-----cCCCCCEEEEcCCcchhh---hHHHhC
Confidence 3888888765221 1223445555555544333 2223334444 258899999996 33222 233333
Q ss_pred -CCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeCChHHHHHHHhhhcCCChHHHHHH
Q 002660 167 -NVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKL 245 (895)
Q Consensus 167 -~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l 245 (895)
++|++...--++............++.. .....+...+-......+..||..+++|.+.... | ++.+.
T Consensus 87 P~a~li~Y~E~~y~~~g~d~~FDpe~p~~-~~~~~~~r~rN~~~l~~l~~~D~~isPT~wQ~~~----f---P~~~r--- 155 (171)
T PF12000_consen 87 PDAPLIGYFEFYYRASGADVGFDPEFPPS-LDDRARLRMRNAHNLLALEQADAGISPTRWQRSQ----F---PAEFR--- 155 (171)
T ss_pred CCCcEEEEEEEEecCCCCcCCCCCCCCCC-HHHHHHHHHHhHHHHHHHHhCCcCcCCCHHHHHh----C---CHHHH---
Confidence 6776553321100000000000000000 1111111111112345688999999999976553 2 33211
Q ss_pred HHhHhccccccCCCCCCEEEeCCCCCCCCC
Q 002660 246 RARIKRNVSCYGKFMPRMAIIPPGMEFHHI 275 (895)
Q Consensus 246 ~~~~~~gv~~~g~~~~~v~vip~Gid~~~f 275 (895)
+||.||+.|||++.+
T Consensus 156 ---------------~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 156 ---------------SKISVIHDGIDTDRF 170 (171)
T ss_pred ---------------cCcEEeecccchhhc
Confidence 289999999999876
No 194
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=97.24 E-value=0.0023 Score=76.15 Aligned_cols=54 Identities=13% Similarity=0.037 Sum_probs=48.0
Q ss_pred CeEEEEEecCCC------CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 612 KHIFVISVDCDS------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 612 ~kli~~DiDGTL------~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
.+.+++..|+++ ...+.+..++++++|++. |++++++||-+...+..+.+++|+
T Consensus 426 ~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l~~~----Gi~v~miTGD~~~ta~~iA~~lGI 485 (675)
T TIGR01497 426 GTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQLRKM----GIKTIMITGDNRLTAAAIAAEAGV 485 (675)
T ss_pred CeEEEEEECCEEEEEEEecccchhHHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCC
Confidence 457788888887 467888999999999998 599999999999999999999998
No 195
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=97.23 E-value=0.58 Score=54.20 Aligned_cols=171 Identities=12% Similarity=0.114 Sum_probs=89.5
Q ss_pred CCcEEEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCC
Q 002660 312 RKPVILALARPDP--KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKH 389 (895)
Q Consensus 312 ~~~~il~vgrl~~--~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~ 389 (895)
...+.++.|.+.. .+.+..++.+++... ..+.++++........ ...+...+.+... ...+.+.++
T Consensus 283 ~svVyvsfGS~~~~~~~~~~ela~gL~~~~-----~~flw~~~~~~~~~~~---~~~lp~~~~~r~~----~~g~~v~~w 350 (477)
T PLN02863 283 HKVVYVCFGSQVVLTKEQMEALASGLEKSG-----VHFIWCVKEPVNEESD---YSNIPSGFEDRVA----GRGLVIRGW 350 (477)
T ss_pred CceEEEEeeceecCCHHHHHHHHHHHHhCC-----CcEEEEECCCcccccc---hhhCCHHHHHHhc----cCCEEecCC
Confidence 3457788887642 233566666666552 2443455532211000 0001111111111 235777899
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCC----chhcc-ccCCCeEEeC-----CCCHH
Q 002660 390 HKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIH-RVLDNGLLVD-----PHDQQ 459 (895)
Q Consensus 390 ~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg----~~eiv-~~~~~g~lv~-----p~d~~ 459 (895)
+|+. .++... +.++||.- +--.+.+||+++|+|+|+-...+ ....+ +.-+.|+.+. .-+.+
T Consensus 351 ~PQ~---~vL~h~--~v~~fvtH----~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~~~~~~~ 421 (477)
T PLN02863 351 APQV---AILSHR--AVGAFLTH----CGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGADTVPDSD 421 (477)
T ss_pred CCHH---HHhcCC--CcCeEEec----CCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCCCCcCHH
Confidence 8874 466653 11566633 33358899999999999966433 22222 2335676662 12678
Q ss_pred HHHHHHHHHHh-CHHH---HHHHHHHHHHHh-hcCCHHHHHHHHHHHHH
Q 002660 460 SVADALLKLVA-DKQL---WARCRQNGLKNI-HLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 460 ~la~ai~~ll~-~~~~---~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~ 503 (895)
++++++.+++. +++. .+++++.+++.+ +.=|...-.++|++.+.
T Consensus 422 ~v~~~v~~~m~~~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~ 470 (477)
T PLN02863 422 ELARVFMESVSENQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVV 470 (477)
T ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHH
Confidence 99999999883 4332 233444444444 22234444566666554
No 196
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=97.22 E-value=0.00053 Score=64.28 Aligned_cols=52 Identities=13% Similarity=0.125 Sum_probs=43.0
Q ss_pred eEEEEEecCCCCcc---------------hhHHHHHHHHHHHhhccCCCeEEEEEcCC-CHHHHHHHHHhCC
Q 002660 613 HIFVISVDCDSTTG---------------LLDATKKICEAVEKERTEGSIGFILSTSM-TISEIHSFLVSGH 668 (895)
Q Consensus 613 kli~~DiDGTL~~~---------------~~~~~~~~l~~l~~~g~~~g~~v~iaTGR-~~~~~~~~l~~l~ 668 (895)
|+|++|+||||... ..+.+.+.|+.|+++ |+.++|+|++ +...+...++.++
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~----g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKN----GFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHC----CeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999322 356899999999987 5999999999 7777777777766
No 197
>PLN02645 phosphoglycolate phosphatase
Probab=97.19 E-value=0.00082 Score=73.43 Aligned_cols=65 Identities=9% Similarity=0.098 Sum_probs=49.7
Q ss_pred cCeEEEEEecCCC--CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCC---HHHHHHHHHhCCCCCCCCCEEEEc
Q 002660 611 RKHIFVISVDCDS--TTGLLDATKKICEAVEKERTEGSIGFILSTSMT---ISEIHSFLVSGHLSPSDFDAFICN 680 (895)
Q Consensus 611 ~~kli~~DiDGTL--~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~---~~~~~~~l~~l~l~~~~~d~~I~~ 680 (895)
..|+++||+|||| ...+.+...+++++|+++ |+.|+++|+|+ ...+.+-++.+|++. .++-++++
T Consensus 27 ~~~~~~~D~DGtl~~~~~~~~ga~e~l~~lr~~----g~~~~~~TN~~~~~~~~~~~~l~~lGi~~-~~~~I~ts 96 (311)
T PLN02645 27 SVETFIFDCDGVIWKGDKLIEGVPETLDMLRSM----GKKLVFVTNNSTKSRAQYGKKFESLGLNV-TEEEIFSS 96 (311)
T ss_pred hCCEEEEeCcCCeEeCCccCcCHHHHHHHHHHC----CCEEEEEeCCCCCCHHHHHHHHHHCCCCC-ChhhEeeh
Confidence 3569999999999 345667889999999998 59999999999 555555567888863 44555554
No 198
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=97.19 E-value=0.00024 Score=75.35 Aligned_cols=64 Identities=8% Similarity=0.041 Sum_probs=50.1
Q ss_pred eEEEEEecCCCC--cc----hhHHHHHHHHHHHhhccCCCeEEEEEcCCCHH---HHHHHHHhCCCCCCCCCEEEEcC
Q 002660 613 HIFVISVDCDST--TG----LLDATKKICEAVEKERTEGSIGFILSTSMTIS---EIHSFLVSGHLSPSDFDAFICNS 681 (895)
Q Consensus 613 kli~~DiDGTL~--~~----~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~---~~~~~l~~l~l~~~~~d~~I~~n 681 (895)
|+|+||+||||. .. +.+.+.+++++|+++ |+.|+++|||+.. .+...++.+|++. .++-++++.
T Consensus 2 k~i~~D~DGtl~~~~~~~~~~~~~a~~al~~l~~~----G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~-~~~~i~ts~ 74 (257)
T TIGR01458 2 KGVLLDISGVLYISDAKSGVAVPGSQEAVKRLRGA----SVKVRFVTNTTKESKQDLLERLQRLGFDI-SEDEVFTPA 74 (257)
T ss_pred CEEEEeCCCeEEeCCCcccCcCCCHHHHHHHHHHC----CCeEEEEECCCCCCHHHHHHHHHHcCCCC-CHHHeEcHH
Confidence 689999999992 23 778999999999998 5999999987555 5777888888863 345566643
No 199
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=97.19 E-value=0.0038 Score=78.85 Aligned_cols=41 Identities=10% Similarity=-0.028 Sum_probs=38.3
Q ss_pred cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 625 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 625 ~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
..+.+.+++++++++++ |+.++++|||++..+..+.+++|+
T Consensus 567 Dplr~~v~~aI~~l~~~----Gi~v~~~TGd~~~ta~~ia~~~gi 607 (997)
T TIGR01106 567 DPPRAAVPDAVGKCRSA----GIKVIMVTGDHPITAKAIAKGVGI 607 (997)
T ss_pred CCChHHHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCC
Confidence 56788999999999998 599999999999999999999998
No 200
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=97.18 E-value=0.11 Score=55.78 Aligned_cols=144 Identities=12% Similarity=0.032 Sum_probs=93.2
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEE-eCCCC
Q 002660 312 RKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVA-YPKHH 390 (895)
Q Consensus 312 ~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~-~~g~~ 390 (895)
++..|+---.-++.-+....++++.... ....++.+-+|-|.. .++|.+++.+...++--.+++. +..++
T Consensus 184 ~~ltILvGNSgd~sNnHieaL~~L~~~~--~~~~kIivPLsYg~~-------n~~Yi~~V~~~~~~lF~~~~~~iL~e~m 254 (360)
T PF07429_consen 184 GKLTILVGNSGDPSNNHIEALEALKQQF--GDDVKIIVPLSYGAN-------NQAYIQQVIQAGKELFGAENFQILTEFM 254 (360)
T ss_pred CceEEEEcCCCCCCccHHHHHHHHHHhc--CCCeEEEEECCCCCc-------hHHHHHHHHHHHHHhcCccceeEhhhhC
Confidence 3444555555778888888888887643 222333333455432 3567888888888875555665 56799
Q ss_pred CCCCHHHHHHHhhcCCcEEEecCC-CCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEe--CCCCHHHHHHHHHH
Q 002660 391 KQSDVPEIYRLAAKTKGVFINPAF-IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLV--DPHDQQSVADALLK 467 (895)
Q Consensus 391 ~~~el~~ly~~A~~~~dv~v~ps~-~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv--~p~d~~~la~ai~~ 467 (895)
|.+|..++++.| |+.++... ..|+|..+ =.+.+|+||+.+.....-..+.+.+--+++ +.-|...+.++=++
T Consensus 255 pf~eYl~lL~~c----Dl~if~~~RQQgiGnI~-lLl~~G~~v~L~~~np~~~~l~~~~ipVlf~~d~L~~~~v~ea~rq 329 (360)
T PF07429_consen 255 PFDEYLALLSRC----DLGIFNHNRQQGIGNIC-LLLQLGKKVFLSRDNPFWQDLKEQGIPVLFYGDELDEALVREAQRQ 329 (360)
T ss_pred CHHHHHHHHHhC----CEEEEeechhhhHhHHH-HHHHcCCeEEEecCChHHHHHHhCCCeEEeccccCCHHHHHHHHHH
Confidence 999999999999 99999974 67887654 478899999988765544444332222333 33344555555444
Q ss_pred HH
Q 002660 468 LV 469 (895)
Q Consensus 468 ll 469 (895)
+.
T Consensus 330 l~ 331 (360)
T PF07429_consen 330 LA 331 (360)
T ss_pred Hh
Confidence 43
No 201
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=97.18 E-value=0.024 Score=62.91 Aligned_cols=145 Identities=14% Similarity=0.198 Sum_probs=86.0
Q ss_pred CCCCCcE-EEEEe-CCCCC-CCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEE
Q 002660 309 TNPRKPV-ILALA-RPDPK-KNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVA 385 (895)
Q Consensus 309 ~~~~~~~-il~vg-rl~~~-Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~ 385 (895)
.++++++ .+.-| |-.+- +.++.++++++.+.+ ..+++.+++...+.. ....+.......+....+.
T Consensus 180 l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~--~~p~l~fvvp~a~~~---------~~~~i~~~~~~~~~~~~~~ 248 (373)
T PF02684_consen 180 LDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKK--QRPDLQFVVPVAPEV---------HEELIEEILAEYPPDVSIV 248 (373)
T ss_pred CCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHH--hCCCeEEEEecCCHH---------HHHHHHHHHHhhCCCCeEE
Confidence 4556654 34444 44333 456888999999974 445666655543321 1122333434443322333
Q ss_pred eCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcC-CCCchhcc----------------ccCC
Q 002660 386 YPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK-NGGPVDIH----------------RVLD 448 (895)
Q Consensus 386 ~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~-~gg~~eiv----------------~~~~ 448 (895)
+. ..+-.++++.| |+.+.. .|.+.+|++..|+|.|..- .+...-.+ .+..
T Consensus 249 ~~----~~~~~~~m~~a----d~al~~-----SGTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~ 315 (373)
T PF02684_consen 249 II----EGESYDAMAAA----DAALAA-----SGTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGRE 315 (373)
T ss_pred Ec----CCchHHHHHhC----cchhhc-----CCHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCC
Confidence 22 34677899999 999887 5899999999999998743 32222111 1100
Q ss_pred --CeEEeCCCCHHHHHHHHHHHHhCHHHHHH
Q 002660 449 --NGLLVDPHDQQSVADALLKLVADKQLWAR 477 (895)
Q Consensus 449 --~g~lv~p~d~~~la~ai~~ll~~~~~~~~ 477 (895)
.-++-+.-+++.+++++..+++|++.++.
T Consensus 316 v~PEliQ~~~~~~~i~~~~~~ll~~~~~~~~ 346 (373)
T PF02684_consen 316 VVPELIQEDATPENIAAELLELLENPEKRKK 346 (373)
T ss_pred cchhhhcccCCHHHHHHHHHHHhcCHHHHHH
Confidence 01222334789999999999999876433
No 202
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.18 E-value=0.09 Score=55.16 Aligned_cols=137 Identities=16% Similarity=0.258 Sum_probs=78.9
Q ss_pred HHhhhhcCCCCCcEEEEE------eCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHH
Q 002660 302 SEIMRFFTNPRKPVILAL------ARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLI 375 (895)
Q Consensus 302 ~~~~~~~~~~~~~~il~v------grl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~ 375 (895)
..+++++...+.++|+.= .-....+++..+.++++.|.+ .. . +++. ++. +..+.+
T Consensus 171 evlkeLgl~~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k---~g-i-V~ip-r~~-------------~~~eif 231 (346)
T COG1817 171 EVLKELGLEEGETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKK---YG-I-VLIP-REK-------------EQAEIF 231 (346)
T ss_pred HHHHHcCCCCCCceEEEeeccccceeeccccchhhHHHHHHHHHh---Cc-E-EEec-Cch-------------hHHHHH
Confidence 356677777765555431 123356777778888888843 22 2 2333 221 122333
Q ss_pred HhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCC---CchhccccCCCeEE
Q 002660 376 DKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG---GPVDIHRVLDNGLL 452 (895)
Q Consensus 376 ~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~g---g~~eiv~~~~~g~l 452 (895)
+.+. ++..+... .+.+.-+|. | +.++ -+-|.-.-||+..|+|.|++..| +..+... ..|.+
T Consensus 232 e~~~---n~i~pk~~-vD~l~Llyy-a----~lvi-----g~ggTMarEaAlLGtpaIs~~pGkll~vdk~li--e~G~~ 295 (346)
T COG1817 232 EGYR---NIIIPKKA-VDTLSLLYY-A----TLVI-----GAGGTMAREAALLGTPAISCYPGKLLAVDKYLI--EKGLL 295 (346)
T ss_pred hhhc---cccCCccc-ccHHHHHhh-h----heee-----cCCchHHHHHHHhCCceEEecCCccccccHHHH--hcCce
Confidence 3332 23222221 122333444 4 4544 34567789999999999999865 3333332 46889
Q ss_pred eCCCCHHHHHHHHHHHHhCHH
Q 002660 453 VDPHDQQSVADALLKLVADKQ 473 (895)
Q Consensus 453 v~p~d~~~la~ai~~ll~~~~ 473 (895)
++..|+.+..+...+.+.++.
T Consensus 296 ~~s~~~~~~~~~a~~~l~~~~ 316 (346)
T COG1817 296 YHSTDEIAIVEYAVRNLKYRR 316 (346)
T ss_pred eecCCHHHHHHHHHHHhhchh
Confidence 998898877777777776654
No 203
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.14 E-value=0.14 Score=52.36 Aligned_cols=202 Identities=12% Similarity=0.057 Sum_probs=112.7
Q ss_pred CCCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEe
Q 002660 142 PVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 221 (895)
Q Consensus 142 ~~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~ 221 (895)
+.+||++.+...-+..++.++.+..+.+.++.+.+.- .-.+..|.||+
T Consensus 68 ~~~Pdl~I~aGrrta~l~~~lkk~~~~~~vVqI~~Pr--------------------------------lp~~~fDlviv 115 (329)
T COG3660 68 EQRPDLIITAGRRTAPLAFYLKKKFGGIKVVQIQDPR--------------------------------LPYNHFDLVIV 115 (329)
T ss_pred cCCCceEEecccchhHHHHHHHHhcCCceEEEeeCCC--------------------------------CCcccceEEec
Confidence 3679999999988888888898888887777766530 02456788999
Q ss_pred CChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchh
Q 002660 222 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 301 (895)
Q Consensus 222 ~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (895)
+-.+.++++....+++. .+.-.|+-|...+. ....
T Consensus 116 p~HD~~~~~s~~~~Nil-----------------------pi~Gs~h~Vt~~~l----------------------Aa~~ 150 (329)
T COG3660 116 PYHDWREELSDQGPNIL-----------------------PINGSPHNVTSQRL----------------------AALR 150 (329)
T ss_pred cchhhhhhhhccCCcee-----------------------eccCCCCcccHHHh----------------------hhhH
Confidence 88776665322111110 11111222221111 1222
Q ss_pred HHhhhhcCCCCCcEEEEEeCCCCCCCH-----HHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHH
Q 002660 302 SEIMRFFTNPRKPVILALARPDPKKNI-----TTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLID 376 (895)
Q Consensus 302 ~~~~~~~~~~~~~~il~vgrl~~~Kgi-----~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~ 376 (895)
+..+.++..+...+-+.+|.-.+.-.. ..+..++.+..+ +....+ ++--++... ..+..++.
T Consensus 151 e~~~~~~p~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~-~~g~~~-lisfSRRTp-----------~~~~s~l~ 217 (329)
T COG3660 151 EAFKHLLPLPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILE-NQGGSF-LISFSRRTP-----------DTVKSILK 217 (329)
T ss_pred HHHHhhCCCCCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHH-hCCceE-EEEeecCCc-----------HHHHHHHH
Confidence 334445445667788889876544433 233333333322 222333 333444332 22233333
Q ss_pred h-cCCCCcEEeCCCC-CCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCc
Q 002660 377 K-YDLYGQVAYPKHH-KQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP 440 (895)
Q Consensus 377 ~-~~l~~~v~~~g~~-~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~ 440 (895)
. +.-.+.+++.+.= ...-..+++..| |.+|.+... . ..+-||.++|+||-+-...+.
T Consensus 218 ~~l~s~~~i~w~~~d~g~NPY~~~La~A----dyii~TaDS--i-nM~sEAasTgkPv~~~~~~~~ 276 (329)
T COG3660 218 NNLNSSPGIVWNNEDTGYNPYIDMLAAA----DYIISTADS--I-NMCSEAASTGKPVFILEPPNF 276 (329)
T ss_pred hccccCceeEeCCCCCCCCchHHHHhhc----ceEEEecch--h-hhhHHHhccCCCeEEEecCCc
Confidence 3 3444445554431 233578899999 999998532 2 236799999999987654443
No 204
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=97.14 E-value=0.058 Score=58.69 Aligned_cols=243 Identities=11% Similarity=0.040 Sum_probs=131.2
Q ss_pred CCCcEEEeccc-c-chhHHHHHhccC-CCCEEEEeCCC-chhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCE
Q 002660 143 VWPVAIHGHYA-D-AGDSAALLSGAL-NVPMLFTGHSL-GRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEI 218 (895)
Q Consensus 143 ~~pDvVh~h~~-~-~~~~~~~~~~~~-~ip~v~t~H~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~ 218 (895)
.+||++.+-+. + ...++..+.+.. .+|+|+++--. |.|+ -.| -....+.+|.
T Consensus 84 ~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~PsVWAWr--------------------~~R----a~~i~~~~D~ 139 (381)
T COG0763 84 NKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVSPSVWAWR--------------------PKR----AVKIAKYVDH 139 (381)
T ss_pred cCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEECcceeeec--------------------hhh----HHHHHHHhhH
Confidence 78998887654 4 444444454432 49999887743 2222 001 1124678899
Q ss_pred EEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 002660 219 VITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGM-EFHHIVPQDGDMDGETEGNEDNPASPD 297 (895)
Q Consensus 219 vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gi-d~~~f~~~~~~~~~~~~~~~~~~~~~~ 297 (895)
+++.-+.+.+.+ ..+ |+ .++.|.+.. |.-.+.+
T Consensus 140 lLailPFE~~~y-~k~-----------------g~--------~~~yVGHpl~d~i~~~~-------------------- 173 (381)
T COG0763 140 LLAILPFEPAFY-DKF-----------------GL--------PCTYVGHPLADEIPLLP-------------------- 173 (381)
T ss_pred eeeecCCCHHHH-Hhc-----------------CC--------CeEEeCChhhhhccccc--------------------
Confidence 999888766543 221 11 233343332 2111211
Q ss_pred CchhHHhhhhcCCCCCcE-EEEEeC-CC-CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHH-H
Q 002660 298 PPIWSEIMRFFTNPRKPV-ILALAR-PD-PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVL-K 373 (895)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~-il~vgr-l~-~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~-~ 373 (895)
.....+.+++.+.++++ .+..|. -. -.+-...+++|++.+.+ ..+++.+++...... ..++. .
T Consensus 174 -~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~--~~~~~~~vlp~~~~~----------~~~~~~~ 240 (381)
T COG0763 174 -DREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKA--RYPDLKFVLPLVNAK----------YRRIIEE 240 (381)
T ss_pred -cHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHh--hCCCceEEEecCcHH----------HHHHHHH
Confidence 11224555666666554 444453 22 23456788889988864 345566555544321 11222 2
Q ss_pred HHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcC-CCCchhcccc-----C
Q 002660 374 LIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK-NGGPVDIHRV-----L 447 (895)
Q Consensus 374 ~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~-~gg~~eiv~~-----~ 447 (895)
..........+.+ ...+-...+..| |+.+.. .|.+.+|++.+|+|.|++- .....-.+.. .
T Consensus 241 ~~~~~~~~~~~~~----~~~~~~~a~~~a----D~al~a-----SGT~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~ 307 (381)
T COG0763 241 ALKWEVAGLSLIL----IDGEKRKAFAAA----DAALAA-----SGTATLEAALAGTPMVVAYKVKPITYFIAKRLVKLP 307 (381)
T ss_pred HhhccccCceEEe----cCchHHHHHHHh----hHHHHh-----ccHHHHHHHHhCCCEEEEEeccHHHHHHHHHhccCC
Confidence 2222221122222 244677899999 998877 5899999999999998753 3222221110 0
Q ss_pred -------CCe-EEe-----CCCCHHHHHHHHHHHHhCHHHHHHHHHH
Q 002660 448 -------DNG-LLV-----DPHDQQSVADALLKLVADKQLWARCRQN 481 (895)
Q Consensus 448 -------~~g-~lv-----~p~d~~~la~ai~~ll~~~~~~~~~~~~ 481 (895)
-.| .++ ..-.++.+++++..++.+...++++.+.
T Consensus 308 yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~ 354 (381)
T COG0763 308 YVSLPNILAGREIVPELIQEDCTPENLARALEELLLNGDRREALKEK 354 (381)
T ss_pred cccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHH
Confidence 001 111 1125789999999999988554444333
No 205
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.98 E-value=0.00098 Score=62.86 Aligned_cols=53 Identities=11% Similarity=0.077 Sum_probs=45.5
Q ss_pred eEEEEEecCCCC-----------cchhHHHHHHHHHHHhhccCCCeEEEEEcCCC--------HHHHHHHHHhCCC
Q 002660 613 HIFVISVDCDST-----------TGLLDATKKICEAVEKERTEGSIGFILSTSMT--------ISEIHSFLVSGHL 669 (895)
Q Consensus 613 kli~~DiDGTL~-----------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~--------~~~~~~~l~~l~l 669 (895)
|+++||+||||. ....+.+.++++.|+++ |+.++|+|+++ ...+..+++.+++
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~----g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEA----GYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHC----CCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 689999999995 24457788999999987 59999999999 7788889999887
No 206
>PLN02764 glycosyltransferase family protein
Probab=96.88 E-value=1.3 Score=50.81 Aligned_cols=115 Identities=14% Similarity=0.088 Sum_probs=70.1
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCc----hhcc-ccCCCeEEeCC---
Q 002660 384 VAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP----VDIH-RVLDNGLLVDP--- 455 (895)
Q Consensus 384 v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~----~eiv-~~~~~g~lv~p--- 455 (895)
+.+.+++|+.+ +++.. +.++||.- +-..+.+||+.+|+|+|+-...+- ...+ +.-+.|+.+.+
T Consensus 319 ~v~~~W~PQ~~---vL~h~--~v~~FvtH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~ 389 (453)
T PLN02764 319 VVWGGWVQQPL---ILSHP--SVGCFVSH----CGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREET 389 (453)
T ss_pred cEEeCCCCHHH---HhcCc--ccCeEEec----CCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccC
Confidence 66678888765 45443 11456532 344788999999999999775442 2233 22345665432
Q ss_pred --CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHh----hcCCHHHHHHHHHHHHHcccC
Q 002660 456 --HDQQSVADALLKLVADK-QLWARCRQNGLKNI----HLFSWPEHCKTYLSRIAGCKP 507 (895)
Q Consensus 456 --~d~~~la~ai~~ll~~~-~~~~~~~~~~~~~~----~~~s~~~~a~~~~~~~~~~~~ 507 (895)
-+.+++.++++++++++ +..+++++++++.- +.=|.....+++++.+.+..+
T Consensus 390 ~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~~~GSS~~~l~~lv~~~~~~~~ 448 (453)
T PLN02764 390 GWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETLASPGLLTGYVDNFIESLQDLVS 448 (453)
T ss_pred CccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcc
Confidence 37789999999999864 44444555544433 223444556666666665544
No 207
>PLN02954 phosphoserine phosphatase
Probab=96.87 E-value=0.005 Score=63.87 Aligned_cols=43 Identities=14% Similarity=0.235 Sum_probs=33.4
Q ss_pred CCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEe
Q 002660 794 VLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 794 ~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaM 841 (895)
.+.+|..+++.+++++|+ +++++ +||+.+ | +.|-+.+|..++.
T Consensus 152 ~~~~K~~~i~~~~~~~~~--~~~i~-iGDs~~-D-i~aa~~~~~~~~~ 194 (224)
T PLN02954 152 RSGGKAEAVQHIKKKHGY--KTMVM-IGDGAT-D-LEARKPGGADLFI 194 (224)
T ss_pred CCccHHHHHHHHHHHcCC--CceEE-EeCCHH-H-HHhhhcCCCCEEE
Confidence 455799999999999886 57887 788877 8 9998886555443
No 208
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=96.83 E-value=0.0049 Score=73.15 Aligned_cols=55 Identities=16% Similarity=0.204 Sum_probs=48.4
Q ss_pred cCeEEEEEecCCC------CcchhHHHHHHHHHHHhhccCCC-eEEEEEcCCCHHHHHHHHHhCCC
Q 002660 611 RKHIFVISVDCDS------TTGLLDATKKICEAVEKERTEGS-IGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 611 ~~kli~~DiDGTL------~~~~~~~~~~~l~~l~~~g~~~g-~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
-.+.+++..||++ ...+.+..+++++.|+++ | +.++|+||.+...+..+++++|+
T Consensus 363 g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L~~~----g~i~v~ivTgd~~~~a~~i~~~lgi 424 (556)
T TIGR01525 363 GKTVVFVAVDGELLGVIALRDQLRPEAKEAIAALKRA----GGIKLVMLTGDNRSAAEAVAAELGI 424 (556)
T ss_pred CcEEEEEEECCEEEEEEEecccchHhHHHHHHHHHHc----CCCeEEEEeCCCHHHHHHHHHHhCC
Confidence 3567888999988 356788999999999987 6 99999999999999999999987
No 209
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=96.82 E-value=0.013 Score=62.49 Aligned_cols=42 Identities=24% Similarity=0.235 Sum_probs=36.0
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEe
Q 002660 797 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 797 sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaM 841 (895)
.|..++..++++++++++++++ +||+.+ | +.+=+.+|..++.
T Consensus 196 ~k~~~~~~~l~~~~~~p~~~l~-IGDs~~-D-i~aA~~AG~~~I~ 237 (273)
T PRK13225 196 SKRRALSQLVAREGWQPAAVMY-VGDETR-D-VEAARQVGLIAVA 237 (273)
T ss_pred CCHHHHHHHHHHhCcChhHEEE-ECCCHH-H-HHHHHHCCCeEEE
Confidence 4778999999999999999988 888887 8 9999999976543
No 210
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=96.81 E-value=0.0064 Score=72.02 Aligned_cols=54 Identities=11% Similarity=0.140 Sum_probs=48.0
Q ss_pred CeEEEEEecCCC------CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 612 KHIFVISVDCDS------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 612 ~kli~~DiDGTL------~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
...++++.||++ ...+.+..++++++|+++ |+.++++||.+...+..+++++|+
T Consensus 385 ~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~----Gi~v~ilSgd~~~~a~~ia~~lgi 444 (562)
T TIGR01511 385 STSVLVAVNGELAGVFALEDQLRPEAKEVIQALKRR----GIEPVMLTGDNRKTAKAVAKELGI 444 (562)
T ss_pred CEEEEEEECCEEEEEEEecccccHHHHHHHHHHHHc----CCeEEEEcCCCHHHHHHHHHHcCC
Confidence 467889999998 366788999999999998 599999999999999999999887
No 211
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=96.79 E-value=0.069 Score=56.71 Aligned_cols=88 Identities=16% Similarity=0.139 Sum_probs=58.5
Q ss_pred CCCcEEEeccc-cchhHHHHHhccCCCCEEEEeCCCch-hhHHHHHHHhhc-cHHHHHh-hhhhhHHHHHHHhhhcccCE
Q 002660 143 VWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGR-DKLEQLLKQARL-SRDEINA-TYKIMRRIEAEELSLDASEI 218 (895)
Q Consensus 143 ~~pDvVh~h~~-~~~~~~~~~~~~~~ip~v~t~H~~~~-~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~e~~~l~~ad~ 218 (895)
-+.||.|+... .++++|+.++.+.|+|+++|-|+... +....+....+. ....++. +.+++..+ =+.+++.||.
T Consensus 171 P~advyHsvstGyAgl~g~~~k~~~g~P~lLTEHGIY~RER~~ei~~a~w~~~~~~~r~~wi~~f~~l--~~~~Y~~Ad~ 248 (268)
T PF11997_consen 171 PKADVYHSVSTGYAGLLGALAKYRYGRPFLLTEHGIYTREREIEILQADWIWESPYVRDLWIRFFESL--SRLAYRAADR 248 (268)
T ss_pred CCCCEEecCCccHHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccccchHHHHHHHHHHHHHH--HHHHHHhhCe
Confidence 34699999886 78999999999999999999999864 333334443332 0111221 22333333 3457999999
Q ss_pred EEeCChHHHHHHHh
Q 002660 219 VITSTRQEIEEQWR 232 (895)
Q Consensus 219 vi~~s~~~~~~~~~ 232 (895)
|++..+...+.|.+
T Consensus 249 I~~l~~~n~~~q~~ 262 (268)
T PF11997_consen 249 ITPLYEYNREWQIE 262 (268)
T ss_pred ecccchhhHHHHHH
Confidence 99999876655533
No 212
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=96.79 E-value=0.013 Score=73.41 Aligned_cols=56 Identities=7% Similarity=-0.020 Sum_probs=47.4
Q ss_pred cCeEEEEEecC-----CC------CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCC
Q 002660 611 RKHIFVISVDC-----DS------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 670 (895)
Q Consensus 611 ~~kli~~DiDG-----TL------~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~ 670 (895)
-.|.+++.+++ |+ ...+.+.++++++.|++. |++++++||-+...+..+.+++|+.
T Consensus 502 G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~----Gi~v~miTGD~~~tA~~ia~~~Gi~ 568 (884)
T TIGR01522 502 GLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTLITG----GVRIIMITGDSQETAVSIARRLGMP 568 (884)
T ss_pred CCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCCC
Confidence 34677777765 33 367788999999999998 5999999999999999999999983
No 213
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=96.79 E-value=0.012 Score=73.14 Aligned_cols=42 Identities=14% Similarity=-0.020 Sum_probs=38.8
Q ss_pred CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 624 TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 624 ~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
.+.+.+.++++++++++. |+.+++.||-+...+..+.+++|+
T Consensus 513 ~Dp~R~~~~~aI~~l~~a----GI~vvmiTGD~~~tA~aIA~~lGI 554 (867)
T TIGR01524 513 LDPPKESTKEAIAALFKN----GINVKVLTGDNEIVTARICQEVGI 554 (867)
T ss_pred eCCCchhHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCC
Confidence 367788999999999998 599999999999999999999998
No 214
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=96.76 E-value=0.0066 Score=76.18 Aligned_cols=41 Identities=10% Similarity=-0.023 Sum_probs=37.9
Q ss_pred cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 625 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 625 ~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
..+.+.++++++++++. |++++++||.+...+..+.+++|+
T Consensus 536 Dplr~~v~e~I~~l~~a----GI~v~miTGD~~~tA~~ia~~~gi 576 (917)
T TIGR01116 536 DPPRPEVADAIEKCRTA----GIRVIMITGDNKETAEAICRRIGI 576 (917)
T ss_pred CCCchhHHHHHHHHHHC----CCEEEEecCCCHHHHHHHHHHcCC
Confidence 56778999999999998 599999999999999999999998
No 215
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=96.75 E-value=0.012 Score=73.23 Aligned_cols=42 Identities=10% Similarity=-0.061 Sum_probs=38.9
Q ss_pred CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 624 TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 624 ~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
...+.+.++++++++++. |+.+++.||=+...+..+.+++|+
T Consensus 548 ~Dp~R~~a~~aI~~l~~a----GI~v~miTGD~~~tA~~IA~~lGI 589 (902)
T PRK10517 548 LDPPKETTAPALKALKAS----GVTVKILTGDSELVAAKVCHEVGL 589 (902)
T ss_pred hCcchhhHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCC
Confidence 367788999999999998 599999999999999999999998
No 216
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=96.73 E-value=0.0028 Score=62.23 Aligned_cols=64 Identities=13% Similarity=0.205 Sum_probs=46.6
Q ss_pred cCeEEEEEecCCCCc--c-------------hhHHHHHHHHHHHhhccCCCeEEEEEcCCCH------------HHHHHH
Q 002660 611 RKHIFVISVDCDSTT--G-------------LLDATKKICEAVEKERTEGSIGFILSTSMTI------------SEIHSF 663 (895)
Q Consensus 611 ~~kli~~DiDGTL~~--~-------------~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~------------~~~~~~ 663 (895)
.+|+++||+||||.. . .-+.+.++|+.|+++ |+.++|+|..+. ..+..+
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~----G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~ 87 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDE----GYKIVIFTNQSGIGRGKLSAESFKNKIEAF 87 (166)
T ss_pred cCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHC----CCEEEEEeCCcccccCcccHHHHHHHHHHH
Confidence 468999999999932 1 125688999999987 599999996443 245778
Q ss_pred HHhCCCCCCCCCEEEEcC
Q 002660 664 LVSGHLSPSDFDAFICNS 681 (895)
Q Consensus 664 l~~l~l~~~~~d~~I~~n 681 (895)
++.+++. .+.+++++
T Consensus 88 l~~~gl~---~~~ii~~~ 102 (166)
T TIGR01664 88 LEKLKVP---IQVLAATH 102 (166)
T ss_pred HHHcCCC---EEEEEecC
Confidence 8999984 34555544
No 217
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=96.73 E-value=0.0022 Score=68.60 Aligned_cols=51 Identities=24% Similarity=0.169 Sum_probs=41.7
Q ss_pred ecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcce-EEEecCcc
Q 002660 792 IPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHK-TVILKGIC 845 (895)
Q Consensus 792 ~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~-gVaMgNa~ 845 (895)
++.+-.+...++.+++++|++++++++ +||+.+ | ++|-+.+|+ .+++.++.
T Consensus 153 ~~~~Kp~p~~~~~~~~~~g~~~~~~l~-IGD~~~-D-i~aA~~aGi~~i~v~~G~ 204 (272)
T PRK13223 153 LPQKKPDPAALLFVMKMAGVPPSQSLF-VGDSRS-D-VLAAKAAGVQCVALSYGY 204 (272)
T ss_pred CCCCCCCcHHHHHHHHHhCCChhHEEE-ECCCHH-H-HHHHHHCCCeEEEEecCC
Confidence 455566778999999999999999998 777777 8 999999997 45665543
No 218
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=96.72 E-value=0.013 Score=73.71 Aligned_cols=43 Identities=9% Similarity=0.109 Sum_probs=39.2
Q ss_pred CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCC
Q 002660 624 TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 670 (895)
Q Consensus 624 ~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~ 670 (895)
...+.+.++++++++++. |+++++.||-+...+..+.+++|+.
T Consensus 577 ~Dplr~~~~~aI~~l~~a----GI~v~miTGD~~~tA~~iA~~~GI~ 619 (941)
T TIGR01517 577 KDPLRPGVREAVQECQRA----GITVRMVTGDNIDTAKAIARNCGIL 619 (941)
T ss_pred cCCCchhHHHHHHHHHHC----CCEEEEECCCChHHHHHHHHHcCCC
Confidence 367788999999999998 5999999999999999999999983
No 219
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=96.71 E-value=0.014 Score=71.57 Aligned_cols=55 Identities=9% Similarity=-0.056 Sum_probs=45.8
Q ss_pred CeEEEEEe---cCCC--------CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCC
Q 002660 612 KHIFVISV---DCDS--------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 670 (895)
Q Consensus 612 ~kli~~Di---DGTL--------~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~ 670 (895)
.+.+++.+ ++.| .+.+.+.++++++++++. |+++++.||.+...+..+.+++|+.
T Consensus 417 ~rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~a----GI~v~miTGD~~~tA~~IA~~lGI~ 482 (755)
T TIGR01647 417 YRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERARHL----GVEVKMVTGDHLAIAKETARRLGLG 482 (755)
T ss_pred CEEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCCC
Confidence 45666666 3333 367888999999999998 5999999999999999999999983
No 220
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=96.69 E-value=0.0098 Score=70.97 Aligned_cols=54 Identities=11% Similarity=0.038 Sum_probs=47.6
Q ss_pred CeEEEEEecCCC------CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 612 KHIFVISVDCDS------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 612 ~kli~~DiDGTL------~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
.+.+++..|+++ ...+.+.+++++++|++. |++++++||=+...+..+.+++|+
T Consensus 425 ~~~l~va~~~~~lG~i~l~D~~R~~~~eai~~Lr~~----GI~vvMiTGDn~~TA~aIA~elGI 484 (679)
T PRK01122 425 GTPLVVAEDNRVLGVIYLKDIVKPGIKERFAELRKM----GIKTVMITGDNPLTAAAIAAEAGV 484 (679)
T ss_pred CcEEEEEECCeEEEEEEEeccCchhHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCC
Confidence 356777788887 367788999999999998 599999999999999999999998
No 221
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=96.69 E-value=0.023 Score=59.75 Aligned_cols=66 Identities=11% Similarity=0.069 Sum_probs=47.3
Q ss_pred ccCeEEEEEecCCC--CcchhHHHHHHHHHHHhhccCCCeEEEEEc---CCCHHHHHHHHHhC-CCCCCCCCEEEEc
Q 002660 610 RRKHIFVISVDCDS--TTGLLDATKKICEAVEKERTEGSIGFILST---SMTISEIHSFLVSG-HLSPSDFDAFICN 680 (895)
Q Consensus 610 ~~~kli~~DiDGTL--~~~~~~~~~~~l~~l~~~g~~~g~~v~iaT---GR~~~~~~~~l~~l-~l~~~~~d~~I~~ 680 (895)
...+.++||+|||| -....+...++|+.|+++| +.+++.| .|+......-|..+ +++ ..+|.++++
T Consensus 6 ~~y~~~l~DlDGvl~~G~~~ipga~e~l~~L~~~g----~~~iflTNn~~~s~~~~~~~L~~~~~~~-~~~~~i~TS 77 (269)
T COG0647 6 DKYDGFLFDLDGVLYRGNEAIPGAAEALKRLKAAG----KPVIFLTNNSTRSREVVAARLSSLGGVD-VTPDDIVTS 77 (269)
T ss_pred hhcCEEEEcCcCceEeCCccCchHHHHHHHHHHcC----CeEEEEeCCCCCCHHHHHHHHHhhcCCC-CCHHHeecH
Confidence 34568999999999 4567788999999999984 6666654 56676677778774 443 234555554
No 222
>PLN00414 glycosyltransferase family protein
Probab=96.69 E-value=1.8 Score=49.77 Aligned_cols=113 Identities=12% Similarity=0.086 Sum_probs=67.7
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCC----chhcc-ccCCCeEEeCC---
Q 002660 384 VAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIH-RVLDNGLLVDP--- 455 (895)
Q Consensus 384 v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg----~~eiv-~~~~~g~lv~p--- 455 (895)
..+.+++|+.+ +++.. +.++||.- +--++.+||+++|+|+|+....+ ...++ +..+.|+.+..
T Consensus 314 ~vv~~w~PQ~~---vL~h~--~v~~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~ 384 (446)
T PLN00414 314 IVWEGWVEQPL---ILSHP--SVGCFVNH----CGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDS 384 (446)
T ss_pred eEEeccCCHHH---HhcCC--ccceEEec----CchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccC
Confidence 45568888765 45444 11445532 34478899999999999976533 22333 23466776642
Q ss_pred --CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHhh----cCCHHHHHHHHHHHHHcc
Q 002660 456 --HDQQSVADALLKLVADK-QLWARCRQNGLKNIH----LFSWPEHCKTYLSRIAGC 505 (895)
Q Consensus 456 --~d~~~la~ai~~ll~~~-~~~~~~~~~~~~~~~----~~s~~~~a~~~~~~~~~~ 505 (895)
-+.+++++++++++.++ +..+++++++++.-+ .=....+.++|++.+.+.
T Consensus 385 ~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~~~gg~ss~l~~~v~~~~~~ 441 (446)
T PLN00414 385 GWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLVSPGLLSGYADKFVEALENE 441 (446)
T ss_pred CccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh
Confidence 37889999999999764 344555555544432 112122356666666543
No 223
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=96.68 E-value=0.0023 Score=68.79 Aligned_cols=64 Identities=6% Similarity=0.064 Sum_probs=47.4
Q ss_pred CeEEEEEecCCC--CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCC---HHHHHHHHHhCCCCCCCCCEEEEc
Q 002660 612 KHIFVISVDCDS--TTGLLDATKKICEAVEKERTEGSIGFILSTSMT---ISEIHSFLVSGHLSPSDFDAFICN 680 (895)
Q Consensus 612 ~kli~~DiDGTL--~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~---~~~~~~~l~~l~l~~~~~d~~I~~ 680 (895)
.|+|+||+|||| .....+.+.++|++|+++ |+.|+++|+|+ .......++.+|+.. .++-++++
T Consensus 2 ~~~~~~D~DGtl~~~~~~~~ga~e~l~~L~~~----g~~~~~~Tnns~~~~~~~~~~l~~~G~~~-~~~~i~ts 70 (279)
T TIGR01452 2 AQGFIFDCDGVLWLGERVVPGAPELLDRLARA----GKAALFVTNNSTKSRAEYALKFARLGFNG-LAEQLFSS 70 (279)
T ss_pred ccEEEEeCCCceEcCCeeCcCHHHHHHHHHHC----CCeEEEEeCCCCCCHHHHHHHHHHcCCCC-ChhhEecH
Confidence 468999999999 344455689999999997 59999999976 555556677888852 23445554
No 224
>PLN03004 UDP-glycosyltransferase
Probab=96.67 E-value=0.91 Score=52.10 Aligned_cols=142 Identities=11% Similarity=0.142 Sum_probs=80.2
Q ss_pred CCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHH-HHHHHHHHHHhcCCCCcEEeCC
Q 002660 312 RKPVILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSAS-VLLSVLKLIDKYDLYGQVAYPK 388 (895)
Q Consensus 312 ~~~~il~vgrl~--~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~-~~~~l~~~~~~~~l~~~v~~~g 388 (895)
+..+.++.|... ..+.+..+..+++... . .+..++......+.-...... +-. ...++.. ..++.+.+
T Consensus 270 ~sVvyvsfGS~~~~~~~q~~ela~gL~~s~----~-~FlW~~r~~~~~~~~~~~~~~~lp~---gf~er~~-~~g~~v~~ 340 (451)
T PLN03004 270 KSVVFLCFGSLGLFSKEQVIEIAVGLEKSG----Q-RFLWVVRNPPELEKTELDLKSLLPE---GFLSRTE-DKGMVVKS 340 (451)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHCC----C-CEEEEEcCCccccccccchhhhCCh---HHHHhcc-CCcEEEEe
Confidence 456788888863 3345566666666653 2 342344421110000000000 001 1112221 23677889
Q ss_pred CCCCCCHHHHHHHhhcCCcE--EEecCCCCCCchHHHHHHHcCCCEEEcCCCC----chhccc-cCCCeEEeCC-----C
Q 002660 389 HHKQSDVPEIYRLAAKTKGV--FINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHR-VLDNGLLVDP-----H 456 (895)
Q Consensus 389 ~~~~~el~~ly~~A~~~~dv--~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg----~~eiv~-~~~~g~lv~p-----~ 456 (895)
++|+.+ +++.+ ++ ||. -+--++++||+++|+|+|+....+ ....+. .-+.|+.++. -
T Consensus 341 W~PQ~~---iL~H~----~v~~FvT----H~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~ 409 (451)
T PLN03004 341 WAPQVP---VLNHK----AVGGFVT----HCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESETGFV 409 (451)
T ss_pred eCCHHH---HhCCC----ccceEec----cCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCcCCcc
Confidence 988765 66777 56 442 233458899999999999976432 233333 3367877752 2
Q ss_pred CHHHHHHHHHHHHhCHH
Q 002660 457 DQQSVADALLKLVADKQ 473 (895)
Q Consensus 457 d~~~la~ai~~ll~~~~ 473 (895)
+.++++++|++++++++
T Consensus 410 ~~e~l~~av~~vm~~~~ 426 (451)
T PLN03004 410 SSTEVEKRVQEIIGECP 426 (451)
T ss_pred CHHHHHHHHHHHhcCHH
Confidence 67899999999998754
No 225
>PLN02554 UDP-glycosyltransferase family protein
Probab=96.67 E-value=2 Score=50.06 Aligned_cols=111 Identities=11% Similarity=0.088 Sum_probs=63.3
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCc----h-hccccCCCeEEeCC-
Q 002660 382 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP----V-DIHRVLDNGLLVDP- 455 (895)
Q Consensus 382 ~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~----~-eiv~~~~~g~lv~p- 455 (895)
+++.+.+++|+.+ +++.. +.++||.= -| -.+++||+.+|+|+|+....+- . .+++..+.|+.++.
T Consensus 342 ~~g~v~~W~PQ~~---iL~H~--~v~~FvtH---~G-~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~ 412 (481)
T PLN02554 342 DIGKVIGWAPQVA---VLAKP--AIGGFVTH---CG-WNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKY 412 (481)
T ss_pred cCceEEeeCCHHH---HhCCc--ccCccccc---Cc-cchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeecc
Confidence 4556668888654 55333 01445522 23 3588999999999999765331 1 23444456766531
Q ss_pred ------------CCHHHHHHHHHHHHh-CHHHH---HHHHHHHHHHh-h-cCCHHHHHHHHHHHH
Q 002660 456 ------------HDQQSVADALLKLVA-DKQLW---ARCRQNGLKNI-H-LFSWPEHCKTYLSRI 502 (895)
Q Consensus 456 ------------~d~~~la~ai~~ll~-~~~~~---~~~~~~~~~~~-~-~~s~~~~a~~~~~~~ 502 (895)
-+.++++++|+++++ +++.+ +++++.+++.+ + -.|+.. .++|++.+
T Consensus 413 ~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~r~~a~~l~~~~~~av~~gGss~~~-l~~lv~~~ 476 (481)
T PLN02554 413 WRGDLLAGEMETVTAEEIERGIRCLMEQDSDVRKRVKEMSEKCHVALMDGGSSHTA-LKKFIQDV 476 (481)
T ss_pred ccccccccccCeEcHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCChHHHH-HHHHHHHH
Confidence 267899999999996 54332 23344444444 2 233333 34444444
No 226
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=96.63 E-value=0.0033 Score=56.09 Aligned_cols=52 Identities=13% Similarity=0.097 Sum_probs=41.3
Q ss_pred EEEEecCCC--CcchhHHHHHHHHHHHhhccCCCeEEEEEc---CCCHHHHHHHHHhCCCC
Q 002660 615 FVISVDCDS--TTGLLDATKKICEAVEKERTEGSIGFILST---SMTISEIHSFLVSGHLS 670 (895)
Q Consensus 615 i~~DiDGTL--~~~~~~~~~~~l~~l~~~g~~~g~~v~iaT---GR~~~~~~~~l~~l~l~ 670 (895)
++||+|||| ...+.+...+++++|+++| ..+++.| .|+.......|+.+|++
T Consensus 1 ~l~D~dGvl~~g~~~ipga~e~l~~L~~~g----~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPGAVEALDALRERG----KPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp EEEESTTTSEETTEE-TTHHHHHHHHHHTT----SEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred CEEeCccEeEeCCCcCcCHHHHHHHHHHcC----CCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 689999999 4667788899999999984 7777766 46777888888999985
No 227
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=96.62 E-value=0.2 Score=58.28 Aligned_cols=243 Identities=13% Similarity=0.047 Sum_probs=130.2
Q ss_pred CCCcEEEec-cccchhHHHHHhccCCC--CEEEEeCCC-chhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCE
Q 002660 143 VWPVAIHGH-YADAGDSAALLSGALNV--PMLFTGHSL-GRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEI 218 (895)
Q Consensus 143 ~~pDvVh~h-~~~~~~~~~~~~~~~~i--p~v~t~H~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~ 218 (895)
.+||++.+- +++..+-.+..+++.|+ |+|+.+--. |.++. .| -+...+..|.
T Consensus 309 ~kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYVsPqVWAWR~---------------------~R---ikki~k~vD~ 364 (608)
T PRK01021 309 TNPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYVCPSIWAWRP---------------------KR---KTILEKYLDL 364 (608)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEECccceeeCc---------------------ch---HHHHHHHhhh
Confidence 789988875 45655555555566785 988877633 11110 11 1224567888
Q ss_pred EEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 002660 219 VITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGM-EFHHIVPQDGDMDGETEGNEDNPASPD 297 (895)
Q Consensus 219 vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gi-d~~~f~~~~~~~~~~~~~~~~~~~~~~ 297 (895)
+++.=+-|.+.+ +. +|+ +++.+-+.. |.-...+
T Consensus 365 ll~IfPFE~~~y-~~-----------------~gv--------~v~yVGHPL~d~i~~~~-------------------- 398 (608)
T PRK01021 365 LLLILPFEQNLF-KD-----------------SPL--------RTVYLGHPLVETISSFS-------------------- 398 (608)
T ss_pred heecCccCHHHH-Hh-----------------cCC--------CeEEECCcHHhhcccCC--------------------
Confidence 999877666543 22 121 344444433 2211110
Q ss_pred CchhHHhhhhcCCCCCcE-EEEEe-CCCC-CCCHHHHHHHHH--hcccccCCCcEEEEEecCCCccccccchHHHHHHHH
Q 002660 298 PPIWSEIMRFFTNPRKPV-ILALA-RPDP-KKNITTLVKAFG--ECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVL 372 (895)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~-il~vg-rl~~-~Kgi~~ll~A~~--~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~ 372 (895)
.....+++++.++++++ .+.-| |-.+ .+.++.+++|++ .+. + ++++++...+.. ..+.+.
T Consensus 399 -~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~---~--~l~fvvp~a~~~---------~~~~i~ 463 (608)
T PRK01021 399 -PNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLA---S--THQLLVSSANPK---------YDHLIL 463 (608)
T ss_pred -CHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhc---c--CeEEEEecCchh---------hHHHHH
Confidence 11123455555556554 34444 3333 346788899988 553 2 355555433211 112333
Q ss_pred HHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEc-CCCCchh---------
Q 002660 373 KLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVAT-KNGGPVD--------- 442 (895)
Q Consensus 373 ~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas-~~gg~~e--------- 442 (895)
...+..+.. .+.+.. .++-.++++.| |+.+.. .|.+.+|++.+|+|.|.. ..+...-
T Consensus 464 ~~~~~~~~~-~~~ii~---~~~~~~~m~aa----D~aLaa-----SGTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki 530 (608)
T PRK01021 464 EVLQQEGCL-HSHIVP---SQFRYELMREC----DCALAK-----CGTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKI 530 (608)
T ss_pred HHHhhcCCC-CeEEec---CcchHHHHHhc----Ceeeec-----CCHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhc
Confidence 333332211 122221 11236899999 999988 589999999999999873 2322111
Q ss_pred ---------ccccCC--CeEE--eCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Q 002660 443 ---------IHRVLD--NGLL--VDPHDQQSVADALLKLVADKQLWARCRQNGLK 484 (895)
Q Consensus 443 ---------iv~~~~--~g~l--v~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~ 484 (895)
++.+.. --++ =+.-+++.+++++ +++.|++.++++.+...+
T Consensus 531 ~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~d~~~r~~~~~~l~~ 584 (608)
T PRK01021 531 ILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILKTSQSKEKQKDACRD 584 (608)
T ss_pred cCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhcCHHHHHHHHHHHHH
Confidence 111110 1122 1234689999996 888888766665554443
No 228
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=96.61 E-value=0.017 Score=72.13 Aligned_cols=42 Identities=7% Similarity=-0.058 Sum_probs=38.9
Q ss_pred CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 624 TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 624 ~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
...+.+.++++++++++. |+.+++.||=+...+..+.+++|+
T Consensus 548 ~Dp~R~~a~~aI~~l~~a----GI~v~miTGD~~~tA~aIA~~lGI 589 (903)
T PRK15122 548 LDPPKESAAPAIAALREN----GVAVKVLTGDNPIVTAKICREVGL 589 (903)
T ss_pred cCccHHHHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCC
Confidence 367888999999999998 599999999999999999999998
No 229
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=96.61 E-value=0.01 Score=72.65 Aligned_cols=55 Identities=9% Similarity=0.029 Sum_probs=48.6
Q ss_pred cCeEEEEEecCCC------CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 611 RKHIFVISVDCDS------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 611 ~~kli~~DiDGTL------~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
-++.+++..||++ ...+.+..++++++|++. |+.+++.||.+...+..+.+++|+
T Consensus 547 g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L~~~----gi~~~llTGd~~~~a~~ia~~lgi 607 (741)
T PRK11033 547 GKTVVLVLRNDDVLGLIALQDTLRADARQAISELKAL----GIKGVMLTGDNPRAAAAIAGELGI 607 (741)
T ss_pred CCEEEEEEECCEEEEEEEEecCCchhHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCC
Confidence 3567888899988 367788999999999998 599999999999999999999997
No 230
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=96.54 E-value=0.0085 Score=75.78 Aligned_cols=42 Identities=7% Similarity=-0.039 Sum_probs=38.7
Q ss_pred cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCC
Q 002660 625 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 670 (895)
Q Consensus 625 ~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~ 670 (895)
..+.+.++++++.+++. |++++++||.+...+..+.+++|+.
T Consensus 645 Dp~r~~v~~aI~~l~~a----GIkv~MiTGD~~~tA~~iA~~~Gi~ 686 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQA----GINVHMLTGDFPETAKAIAQEVGII 686 (1053)
T ss_pred cCCchhHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHcCCC
Confidence 56778999999999998 5999999999999999999999983
No 231
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=96.45 E-value=2.5 Score=48.67 Aligned_cols=146 Identities=14% Similarity=0.160 Sum_probs=76.7
Q ss_pred CCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccc-cchHHHHHHHHHHHHhcCCCCcEEeCC
Q 002660 312 RKPVILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMS-STSASVLLSVLKLIDKYDLYGQVAYPK 388 (895)
Q Consensus 312 ~~~~il~vgrl~--~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~-~~~~~~~~~l~~~~~~~~l~~~v~~~g 388 (895)
+..+.++.|.+. ..+.+..+..+++.+. . .+..++......+... ....+.........++ ..++..+.+
T Consensus 261 ~sVvyvsfGS~~~l~~~q~~ela~gL~~s~----~-~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~--~~~~g~v~~ 333 (455)
T PLN02152 261 SSVIYVSFGTMVELSKKQIEELARALIEGK----R-PFLWVITDKLNREAKIEGEEETEIEKIAGFRHE--LEEVGMIVS 333 (455)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHcC----C-CeEEEEecCcccccccccccccccccchhHHHh--ccCCeEEEe
Confidence 456778888754 4456677777777763 1 3323444321100000 0000000001112222 234556678
Q ss_pred CCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCc----hhcccc-CCCeEEeC-----CCCH
Q 002660 389 HHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP----VDIHRV-LDNGLLVD-----PHDQ 458 (895)
Q Consensus 389 ~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~----~eiv~~-~~~g~lv~-----p~d~ 458 (895)
++|+.+ +++..+ ..+||. -+-.++++||+.+|+|+|+-...+- ...+.+ -+.|+-+. .-+.
T Consensus 334 W~PQ~~---iL~h~~--vg~fvt----H~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~ 404 (455)
T PLN02152 334 WCSQIE---VLRHRA--VGCFVT----HCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLVER 404 (455)
T ss_pred eCCHHH---HhCCcc--cceEEe----eCCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCcCcH
Confidence 988654 566651 123442 2344688999999999999765332 222222 12454442 1267
Q ss_pred HHHHHHHHHHHhCHH
Q 002660 459 QSVADALLKLVADKQ 473 (895)
Q Consensus 459 ~~la~ai~~ll~~~~ 473 (895)
+++++++.++++++.
T Consensus 405 e~l~~av~~vm~~~~ 419 (455)
T PLN02152 405 GEIRRCLEAVMEEKS 419 (455)
T ss_pred HHHHHHHHHHHhhhH
Confidence 899999999997543
No 232
>PRK11590 hypothetical protein; Provisional
Probab=96.43 E-value=0.018 Score=59.16 Aligned_cols=49 Identities=14% Similarity=0.030 Sum_probs=34.7
Q ss_pred eEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEec
Q 002660 788 RINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 842 (895)
Q Consensus 788 ~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMg 842 (895)
..-....|..|...|+.++ +.+.+..+| -||+.+ | ++||+.|+.++++.
T Consensus 154 ~~g~~c~g~~K~~~l~~~~---~~~~~~~~a-Y~Ds~~-D-~pmL~~a~~~~~vn 202 (211)
T PRK11590 154 VLTLRCLGHEKVAQLERKI---GTPLRLYSG-YSDSKQ-D-NPLLYFCQHRWRVT 202 (211)
T ss_pred ECCccCCChHHHHHHHHHh---CCCcceEEE-ecCCcc-c-HHHHHhCCCCEEEC
Confidence 3333455666777666554 567777778 566666 6 99999999999985
No 233
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=96.40 E-value=0.0082 Score=57.27 Aligned_cols=79 Identities=14% Similarity=-0.004 Sum_probs=44.4
Q ss_pred CCCcEEEeccc-cchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEe
Q 002660 143 VWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 221 (895)
Q Consensus 143 ~~pDvVh~h~~-~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~ 221 (895)
..+|+|.+.+. +...+..+....-++|.++++|.....+ ...+.......|.+... ...-.||.|+.
T Consensus 58 ~~~dll~aTsmldLa~l~gL~p~l~~~p~ilYFHENQl~Y-------P~~~~~~rd~~~~~~ni-----~saLaAD~v~F 125 (168)
T PF12038_consen 58 HSYDLLFATSMLDLATLRGLRPDLANVPKILYFHENQLAY-------PVSPGQERDFQYGMNNI-----YSALAADRVVF 125 (168)
T ss_pred cCCCEEEeeccccHHHHHhhccCCCCCCEEEEEecCcccC-------CCCCCccccccHHHHHH-----HHHHhceeeee
Confidence 55899999886 3222222232445799999999753222 00011111112223322 25668999999
Q ss_pred CChHHHHHHHhh
Q 002660 222 STRQEIEEQWRL 233 (895)
Q Consensus 222 ~s~~~~~~~~~~ 233 (895)
.|....+.+...
T Consensus 126 NS~~nr~sFL~~ 137 (168)
T PF12038_consen 126 NSAFNRDSFLDG 137 (168)
T ss_pred cchhhHHHHHHH
Confidence 998776665543
No 234
>PLN00164 glucosyltransferase; Provisional
Probab=96.39 E-value=2.9 Score=48.66 Aligned_cols=81 Identities=16% Similarity=0.198 Sum_probs=51.5
Q ss_pred cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCC----chhcc-ccCCCeEEeCC--
Q 002660 383 QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIH-RVLDNGLLVDP-- 455 (895)
Q Consensus 383 ~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg----~~eiv-~~~~~g~lv~p-- 455 (895)
.+.+.++.|+.+ ++...+ ..+||.= -|+ .+.+||+++|+|+|+-..-+ ...++ +.-+.|+.++.
T Consensus 340 g~~v~~w~PQ~~---iL~h~~--vg~fvtH---~Gw-nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~ 410 (480)
T PLN00164 340 GLVWPTWAPQKE---ILAHAA--VGGFVTH---CGW-NSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDR 410 (480)
T ss_pred CeEEeecCCHHH---HhcCcc--cCeEEee---ccc-chHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEecccc
Confidence 356668877654 555550 0244422 233 58899999999999966432 22222 33466776642
Q ss_pred -----CCHHHHHHHHHHHHhCH
Q 002660 456 -----HDQQSVADALLKLVADK 472 (895)
Q Consensus 456 -----~d~~~la~ai~~ll~~~ 472 (895)
-+.++++++|.+++.++
T Consensus 411 ~~~~~~~~e~l~~av~~vm~~~ 432 (480)
T PLN00164 411 KRDNFVEAAELERAVRSLMGGG 432 (480)
T ss_pred ccCCcCcHHHHHHHHHHHhcCC
Confidence 25789999999999764
No 235
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=96.38 E-value=0.0072 Score=57.77 Aligned_cols=50 Identities=14% Similarity=0.228 Sum_probs=40.9
Q ss_pred EEEEEecCCCCcc--------------hhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHH---HHHHHhC
Q 002660 614 IFVISVDCDSTTG--------------LLDATKKICEAVEKERTEGSIGFILSTSMTISEI---HSFLVSG 667 (895)
Q Consensus 614 li~~DiDGTL~~~--------------~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~---~~~l~~l 667 (895)
+|++|||||+|.. ..+...++.++++++ |.+++.+|+|+...+ +.||...
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~----GY~ilYlTaRp~~qa~~Tr~~L~~~ 67 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADN----GYKILYLTARPIGQANRTRSWLAQH 67 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHC----CeEEEEECcCcHHHHHHHHHHHHHH
Confidence 4799999999532 567788999999998 599999999997654 5688777
No 236
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=96.36 E-value=0.022 Score=68.04 Aligned_cols=53 Identities=9% Similarity=0.046 Sum_probs=45.1
Q ss_pred eEEEEEecCCC------CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 613 HIFVISVDCDS------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 613 kli~~DiDGTL------~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
+.+++..|+++ ...+.+..++++++|++. |++++++||-+...+..+.+++|+
T Consensus 422 ~~l~v~~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~----GI~vvMiTGDn~~TA~aIA~elGI 480 (673)
T PRK14010 422 TPLVVLEDNEILGVIYLKDVIKDGLVERFRELREM----GIETVMCTGDNELTAATIAKEAGV 480 (673)
T ss_pred eEEEEEECCEEEEEEEeecCCcHHHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCC
Confidence 34444457776 367788999999999998 599999999999999999999998
No 237
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=96.33 E-value=0.038 Score=65.34 Aligned_cols=190 Identities=14% Similarity=0.089 Sum_probs=122.5
Q ss_pred CCCCCcEEEEEeCCCCCCCHHHHH----HHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcE
Q 002660 309 TNPRKPVILALARPDPKKNITTLV----KAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQV 384 (895)
Q Consensus 309 ~~~~~~~il~vgrl~~~Kgi~~ll----~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v 384 (895)
..++...++++=|+...|...+.+ +.+..+++ ...|.+++|.|+...+... ...+....|+..++..+...+|
T Consensus 483 ~~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~-d~~prv~~iFaGKAhP~y~--~aK~iIk~I~~~a~~in~~lkV 559 (750)
T COG0058 483 VDPNALFDGQARRIHEYKRQLLNLLDIERLYRILKE-DWVPRVQIIFAGKAHPADY--AAKEIIKLINDVADVINNKLKV 559 (750)
T ss_pred cCCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhc-CCCCceEEEEeccCCCcch--HHHHHHHHHHHHHHhhcccceE
Confidence 346778899999999999765443 33333432 3446676555554333222 2466788888888888877788
Q ss_pred EeCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCchHHHHHHHcCCCEEEcCCCCchhccc--cCCCeEEeCCCCHHH
Q 002660 385 AYPKHHKQSDVPEIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPIVATKNGGPVDIHR--VLDNGLLVDPHDQQS 460 (895)
Q Consensus 385 ~~~g~~~~~el~~ly~~A~~~~dv~v~ps~--~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~--~~~~g~lv~p~d~~~ 460 (895)
.|....+-.--.-++..| ||-.+.|. .|..|..-+=++.-|.|-|+|..|+..|+.+ .+.||+++-. +.++
T Consensus 560 vFl~nYdvslA~~iipa~----Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG~-~~~~ 634 (750)
T COG0058 560 VFLPNYDVSLAELLIPAA----DVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFGE-TVEE 634 (750)
T ss_pred EEeCCCChhHHHhhcccc----cccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeCC-chhh
Confidence 888887655455556666 99999886 7889998889999999999999999999986 7889999953 3333
Q ss_pred HHHHHHHHHhCHHHHHHH----HHHHHHHh-hcCCHHHHHHHHHHHHHcccC
Q 002660 461 VADALLKLVADKQLWARC----RQNGLKNI-HLFSWPEHCKTYLSRIAGCKP 507 (895)
Q Consensus 461 la~ai~~ll~~~~~~~~~----~~~~~~~~-~~~s~~~~a~~~~~~~~~~~~ 507 (895)
.-.....-.......... ...--... ..|+. .|...+.+.+..+..
T Consensus 635 v~~~~~~~~~~~~~y~~~~~~v~~~~~~~~~~~~~p-~~~~~~~~~~~sl~~ 685 (750)
T COG0058 635 VDALRADGYDPNALYYELENEVKPVLDEIIDGRFSP-GWKSRFKNLIDSLLP 685 (750)
T ss_pred HHHHHhcccccHHHHHHHhHHHHHHHHHHhcccCCc-ccHHHHHHHHHHhhh
Confidence 332222222222122221 12122222 24565 666666666666543
No 238
>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins. These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process
Probab=96.17 E-value=0.012 Score=49.42 Aligned_cols=36 Identities=31% Similarity=0.299 Sum_probs=29.6
Q ss_pred CCCcEEEecccc--chhHHHHHhccCCCCEEEEeCCCc
Q 002660 143 VWPVAIHGHYAD--AGDSAALLSGALNVPMLFTGHSLG 178 (895)
Q Consensus 143 ~~pDvVh~h~~~--~~~~~~~~~~~~~ip~v~t~H~~~ 178 (895)
++.||||+|... .+--+...|+.+|++.|+|-|++.
T Consensus 49 E~I~IVHgH~a~S~l~hE~i~hA~~mGlktVfTDHSLf 86 (90)
T PF08288_consen 49 ERIDIVHGHQAFSTLCHEAILHARTMGLKTVFTDHSLF 86 (90)
T ss_pred cCeeEEEeehhhhHHHHHHHHHHHhCCCcEEeeccccc
Confidence 689999999873 344456778899999999999974
No 239
>PLN02167 UDP-glycosyltransferase family protein
Probab=96.11 E-value=3.9 Score=47.51 Aligned_cols=170 Identities=14% Similarity=0.120 Sum_probs=88.0
Q ss_pred CCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCC
Q 002660 312 RKPVILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKH 389 (895)
Q Consensus 312 ~~~~il~vgrl~--~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~ 389 (895)
+..+.++.|.+. ..+.+..+..+++.+. ..+.++++...... ......+-+.+.+ +. .++..+.++
T Consensus 280 ~svvyvsfGS~~~~~~~~~~ela~~l~~~~-----~~flw~~~~~~~~~--~~~~~~lp~~~~e---r~--~~rg~v~~w 347 (475)
T PLN02167 280 SSVVFLCFGSLGSLPAPQIKEIAQALELVG-----CRFLWSIRTNPAEY--ASPYEPLPEGFMD---RV--MGRGLVCGW 347 (475)
T ss_pred CceEEEeecccccCCHHHHHHHHHHHHhCC-----CcEEEEEecCcccc--cchhhhCChHHHH---Hh--ccCeeeecc
Confidence 346777888763 3345666667776652 24434555321100 0000000011111 11 134455688
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCch-----hccccCCCeEEeCC---------
Q 002660 390 HKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPV-----DIHRVLDNGLLVDP--------- 455 (895)
Q Consensus 390 ~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~-----eiv~~~~~g~lv~p--------- 455 (895)
+|+.+ ++...+ .+.||.= -|+ .+.+||+++|+|+|+-...+-. -+++..+.|+.+..
T Consensus 348 ~PQ~~---iL~h~~--vg~fvtH---~G~-nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~ 418 (475)
T PLN02167 348 APQVE---ILAHKA--IGGFVSH---CGW-NSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAYGEI 418 (475)
T ss_pred CCHHH---HhcCcc--cCeEEee---CCc-ccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeecccccccCCc
Confidence 87654 565541 1455532 233 4888999999999997653321 12334456776642
Q ss_pred CCHHHHHHHHHHHHhCHH----HHHHHHHHHHHHh-hcCCHHHHHHHHHHHH
Q 002660 456 HDQQSVADALLKLVADKQ----LWARCRQNGLKNI-HLFSWPEHCKTYLSRI 502 (895)
Q Consensus 456 ~d~~~la~ai~~ll~~~~----~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~ 502 (895)
-+.++++++|.+++.+++ ..+++++.+++.+ +.=|...-.++|++.+
T Consensus 419 ~~~~~l~~av~~~m~~~~~~r~~a~~~~~~~~~av~~gGsS~~~l~~~v~~i 470 (475)
T PLN02167 419 VKADEIAGAVRSLMDGEDVPRKKVKEIAEAARKAVMDGGSSFVAVKRFIDDL 470 (475)
T ss_pred ccHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 267899999999997532 2334445555555 2223333344554443
No 240
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=96.10 E-value=0.019 Score=68.62 Aligned_cols=52 Identities=13% Similarity=0.123 Sum_probs=47.9
Q ss_pred EEEEEecCCC------CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 614 IFVISVDCDS------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 614 li~~DiDGTL------~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
++++..||.+ ...+.+..++++++|++. |+++++.||=+...++.+.+++|+
T Consensus 519 ~v~va~dg~~~g~i~~~D~~R~~a~~aI~~L~~~----Gi~~~mLTGDn~~~A~~iA~~lGI 576 (713)
T COG2217 519 VVFVAVDGKLVGVIALADELRPDAKEAIAALKAL----GIKVVMLTGDNRRTAEAIAKELGI 576 (713)
T ss_pred EEEEEECCEEEEEEEEeCCCChhHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHcCh
Confidence 7999999977 477889999999999998 599999999999999999999998
No 241
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=96.09 E-value=0.02 Score=67.57 Aligned_cols=53 Identities=8% Similarity=-0.019 Sum_probs=45.9
Q ss_pred eEEEEEecCCC------CcchhHHHHHHHHHHHhhccCCCe-EEEEEcCCCHHHHHHHHHhCCC
Q 002660 613 HIFVISVDCDS------TTGLLDATKKICEAVEKERTEGSI-GFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 613 kli~~DiDGTL------~~~~~~~~~~~l~~l~~~g~~~g~-~v~iaTGR~~~~~~~~l~~l~l 669 (895)
..+++..||++ ...+.+..++++++|+++ |+ .++++||.+...+..+++++|+
T Consensus 343 ~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L~~~----Gi~~v~vvTgd~~~~a~~i~~~lgi 402 (536)
T TIGR01512 343 TIVHVARDGTYLGYILLSDEPRPDAAEAIAELKAL----GIEKVVMLTGDRRAVAERVARELGI 402 (536)
T ss_pred eEEEEEECCEEEEEEEEeccchHHHHHHHHHHHHc----CCCcEEEEcCCCHHHHHHHHHHcCC
Confidence 45677788877 356778999999999998 59 9999999999999999999987
No 242
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=96.09 E-value=0.014 Score=56.52 Aligned_cols=40 Identities=13% Similarity=0.233 Sum_probs=30.1
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEe
Q 002660 797 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 797 sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaM 841 (895)
.|+.+|+.|++ |.+.+.+++ +||..| | ++|..-+..=++-
T Consensus 159 gKa~~i~~lrk--~~~~~~~~m-vGDGat-D-lea~~pa~afi~~ 198 (227)
T KOG1615|consen 159 GKAEVIALLRK--NYNYKTIVM-VGDGAT-D-LEAMPPADAFIGF 198 (227)
T ss_pred ccHHHHHHHHh--CCChheeEE-ecCCcc-c-cccCCchhhhhcc
Confidence 79999999999 777677777 888888 8 8887664333333
No 243
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.07 E-value=0.023 Score=59.02 Aligned_cols=36 Identities=8% Similarity=0.143 Sum_probs=30.4
Q ss_pred HHHHHHHHHhhccCCCeEEEEEcCC----CHHHHHHHHHhCCCC
Q 002660 631 TKKICEAVEKERTEGSIGFILSTSM----TISEIHSFLVSGHLS 670 (895)
Q Consensus 631 ~~~~l~~l~~~g~~~g~~v~iaTGR----~~~~~~~~l~~l~l~ 670 (895)
.+++|+.++++ |+.++|+|+| ....+..+++.+|++
T Consensus 119 a~elL~~l~~~----G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 119 ARQLIDMHQRR----GDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred HHHHHHHHHHC----CCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 77888888887 5999999999 666788888889984
No 244
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=96.03 E-value=0.019 Score=58.81 Aligned_cols=55 Identities=13% Similarity=0.081 Sum_probs=44.7
Q ss_pred cCeEEEEEecCCCC-----------------------------cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHH--
Q 002660 611 RKHIFVISVDCDST-----------------------------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISE-- 659 (895)
Q Consensus 611 ~~kli~~DiDGTL~-----------------------------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~-- 659 (895)
.+-.++||+|-|+. ....+.+.++++.++++ |+.|+++|||+...
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~----G~~Vf~lTGR~e~~r~ 151 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIEL----GIKIFLLSGRWEELRN 151 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHC----CCEEEEEcCCChHHHH
Confidence 45689999999981 22446788899999988 59999999999766
Q ss_pred -HHHHHHhCCC
Q 002660 660 -IHSFLVSGHL 669 (895)
Q Consensus 660 -~~~~l~~l~l 669 (895)
..+.|.+.|+
T Consensus 152 ~T~~nL~~~G~ 162 (229)
T TIGR01675 152 ATLDNLINAGF 162 (229)
T ss_pred HHHHHHHHcCC
Confidence 6788888898
No 245
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=95.98 E-value=0.04 Score=70.32 Aligned_cols=41 Identities=15% Similarity=0.098 Sum_probs=38.3
Q ss_pred cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 625 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 625 ~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
+.+.+.+++++++|++. |++++++||.+...+..+.+++|+
T Consensus 655 d~lr~~~~~~I~~l~~a----gi~v~miTGD~~~TA~~iA~~~gi 695 (1054)
T TIGR01657 655 NPLKPDTKEVIKELKRA----SIRTVMITGDNPLTAVHVARECGI 695 (1054)
T ss_pred cCCCccHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCC
Confidence 56778999999999998 599999999999999999999998
No 246
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=95.97 E-value=0.03 Score=56.97 Aligned_cols=47 Identities=21% Similarity=0.162 Sum_probs=41.0
Q ss_pred CCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEecC
Q 002660 794 VLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKG 843 (895)
Q Consensus 794 ~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgN 843 (895)
.|-.|..+++.++++.+++++++++ +||+.+ | ++|++.+|.++++..
T Consensus 152 ~g~~K~~~l~~~~~~~~~~~~~~~~-~gDs~~-D-~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 152 KGEGKVHALAELLAEEQIDLKDSYA-YGDSIS-D-LPLLSLVGHPYVVNP 198 (202)
T ss_pred CChHHHHHHHHHHHHcCCCHHHcEe-eeCCcc-c-HHHHHhCCCcEEeCC
Confidence 3557999999999999999999999 677777 8 999999999998863
No 247
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=95.94 E-value=0.41 Score=51.99 Aligned_cols=194 Identities=15% Similarity=0.130 Sum_probs=111.0
Q ss_pred CCCcEEEeccccchhHHHHHhccCCC--CEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEE
Q 002660 143 VWPVAIHGHYADAGDSAALLSGALNV--PMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVI 220 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~~~~~i--p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi 220 (895)
-.||+|.+....+..++..+++..|. +.|+..+-- ...+..|.||
T Consensus 56 ~~pdLiIsaGr~t~~~~~~l~r~~gg~~~~V~i~~P~---------------------------------~~~~~FDlvi 102 (311)
T PF06258_consen 56 PWPDLIISAGRRTAPAALALRRASGGRTKTVQIMDPR---------------------------------LPPRPFDLVI 102 (311)
T ss_pred CCCcEEEECCCchHHHHHHHHHHcCCCceEEEEcCCC---------------------------------CCccccCEEE
Confidence 56999999998888888888888776 555444411 0245679999
Q ss_pred eCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEE---EeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 002660 221 TSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMA---IIPPGMEFHHIVPQDGDMDGETEGNEDNPASPD 297 (895)
Q Consensus 221 ~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~---vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~ 297 (895)
++..+.... . +++. .-||.++.+.....
T Consensus 103 ~p~HD~~~~--------~----------------------~Nvl~t~ga~~~i~~~~l~~a------------------- 133 (311)
T PF06258_consen 103 VPEHDRLPR--------G----------------------PNVLPTLGAPNRITPERLAEA------------------- 133 (311)
T ss_pred ECcccCcCC--------C----------------------CceEecccCCCcCCHHHHHHH-------------------
Confidence 988642100 0 1332 23344443332211
Q ss_pred CchhHHhhhhcCCCCCcEEEEEeCCCCCC--CHH---HHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHH
Q 002660 298 PPIWSEIMRFFTNPRKPVILALARPDPKK--NIT---TLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVL 372 (895)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~il~vgrl~~~K--gi~---~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~ 372 (895)
......++...+...+.+.+|.-...- +-+ .+++.+..+.+... ..+ +|..++... .+....|.
T Consensus 134 --~~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~-~~~-~vttSRRTp-------~~~~~~L~ 202 (311)
T PF06258_consen 134 --AAAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG-GSL-LVTTSRRTP-------PEAEAALR 202 (311)
T ss_pred --HHhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC-CeE-EEEcCCCCc-------HHHHHHHH
Confidence 111122333345566777888644332 333 55555555542222 233 355555432 22334444
Q ss_pred HHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCC
Q 002660 373 KLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG 439 (895)
Q Consensus 373 ~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg 439 (895)
+..+ -.+.+.+...-+..-+..+|..| |.+++|. |..+ -+.||+++|+||..-...+
T Consensus 203 ~~~~---~~~~~~~~~~~~~nPy~~~La~a----d~i~VT~--DSvS-MvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 203 ELLK---DNPGVYIWDGTGENPYLGFLAAA----DAIVVTE--DSVS-MVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred Hhhc---CCCceEEecCCCCCcHHHHHHhC----CEEEEcC--ccHH-HHHHHHHcCCCEEEecCCC
Confidence 4433 33566555655566699999999 9999995 3333 3689999999998876654
No 248
>PRK14986 glycogen phosphorylase; Provisional
Probab=95.92 E-value=0.093 Score=62.97 Aligned_cols=140 Identities=12% Similarity=0.115 Sum_probs=99.8
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCC-----cEEEEEecCCCccccccchHHHHHHHHHHHH----hc
Q 002660 309 TNPRKPVILALARPDPKKNITT-LVKAFGECRPLRELA-----NLTLIMGNRDGIDEMSSTSASVLLSVLKLID----KY 378 (895)
Q Consensus 309 ~~~~~~~il~vgrl~~~Kgi~~-ll~A~~~l~~~~~~~-----~l~livG~~~~~~~~~~~~~~~~~~l~~~~~----~~ 378 (895)
.+++...++++-|+...|...+ ++..+.++......+ ..++|.|+...... ....+++..|+..++ .-
T Consensus 539 ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y--~~aK~iIk~I~~va~~in~Dp 616 (815)
T PRK14986 539 VNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAY--YMAKHIIHLINDVAKVINNDP 616 (815)
T ss_pred cCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCc--HHHHHHHHHHHHHHHHhccCh
Confidence 5577788999999999998877 666655543323222 24455544332221 124567777888777 33
Q ss_pred CCCC--cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCchHHHHHHHcCCCEEEcCCCCchhcccc--CCCeEE
Q 002660 379 DLYG--QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV--LDNGLL 452 (895)
Q Consensus 379 ~l~~--~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~--~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~--~~~g~l 452 (895)
.+.+ +|.|+....-.--..++..| ||-.+.|. .|..|..-+=+|.-|.+.++|..|...|+.++ +.||++
T Consensus 617 ~v~~~lkVVFlenY~vslAe~lipg~----Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~~~ 692 (815)
T PRK14986 617 QIGDKLKVVFIPNYSVSLAQLIIPAA----DLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFI 692 (815)
T ss_pred hhcCceeEEEeCCCCHHHHHHhhhhh----hhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcEEE
Confidence 3444 68888776555555566666 99999987 78899999999999999999999999999875 778888
Q ss_pred eC
Q 002660 453 VD 454 (895)
Q Consensus 453 v~ 454 (895)
+.
T Consensus 693 fG 694 (815)
T PRK14986 693 FG 694 (815)
T ss_pred eC
Confidence 84
No 249
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=95.91 E-value=0.026 Score=70.57 Aligned_cols=43 Identities=9% Similarity=0.058 Sum_probs=39.0
Q ss_pred CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCC
Q 002660 624 TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 670 (895)
Q Consensus 624 ~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~ 670 (895)
...+.+.++++++.++++ |+++.++||=+...+..+.+++|+.
T Consensus 545 ~Dppr~~v~~aI~~l~~A----GI~v~MiTGD~~~TA~aIa~~~Gi~ 587 (917)
T COG0474 545 EDPPREDVKEAIEELREA----GIKVWMITGDHVETAIAIAKECGIE 587 (917)
T ss_pred cCCCCccHHHHHHHHHHC----CCcEEEECCCCHHHHHHHHHHcCCC
Confidence 356778999999999998 5999999999999999999999984
No 250
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=95.90 E-value=0.03 Score=58.06 Aligned_cols=46 Identities=17% Similarity=0.145 Sum_probs=38.7
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcce-EEEecCcc
Q 002660 797 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHK-TVILKGIC 845 (895)
Q Consensus 797 sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~-gVaMgNa~ 845 (895)
.|..+++.++++++++++++++ +||+.+ | ++|.+.+|. +|.+..+.
T Consensus 150 p~~~~~~~~~~~~~~~~~~~i~-igD~~~-D-i~~a~~~g~~~i~v~~g~ 196 (226)
T PRK13222 150 PDPAPLLLACEKLGLDPEEMLF-VGDSRN-D-IQAARAAGCPSVGVTYGY 196 (226)
T ss_pred cChHHHHHHHHHcCCChhheEE-ECCCHH-H-HHHHHHCCCcEEEECcCC
Confidence 3578899999999999999998 888877 8 999999998 66665443
No 251
>PLN03015 UDP-glucosyl transferase
Probab=95.87 E-value=4.8 Score=46.44 Aligned_cols=78 Identities=18% Similarity=0.187 Sum_probs=48.8
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCc----hhcc-ccCCCeEEeC----
Q 002660 384 VAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP----VDIH-RVLDNGLLVD---- 454 (895)
Q Consensus 384 v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~----~eiv-~~~~~g~lv~---- 454 (895)
+.+.++.|+.++-+ .. +...||.- +--++.+||+.+|+|+|+-...+- ..++ +..+.|+-+.
T Consensus 337 l~v~~W~PQ~~vL~---h~--~vg~fvtH----~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~ 407 (470)
T PLN03015 337 LVVTQWAPQVEILS---HR--SIGGFLSH----CGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPS 407 (470)
T ss_pred eEEEecCCHHHHhc---cC--ccCeEEec----CCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEeccccc
Confidence 55678888776444 33 11345422 233588999999999999765331 1222 2334565553
Q ss_pred --CCCHHHHHHHHHHHHh
Q 002660 455 --PHDQQSVADALLKLVA 470 (895)
Q Consensus 455 --p~d~~~la~ai~~ll~ 470 (895)
.-..++++++|+++++
T Consensus 408 ~~~v~~e~i~~~v~~lm~ 425 (470)
T PLN03015 408 EKVIGREEVASLVRKIVA 425 (470)
T ss_pred CCccCHHHHHHHHHHHHc
Confidence 1367899999999995
No 252
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=95.79 E-value=0.033 Score=58.01 Aligned_cols=40 Identities=20% Similarity=0.123 Sum_probs=34.2
Q ss_pred hHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEE
Q 002660 798 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVI 840 (895)
Q Consensus 798 Kg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVa 840 (895)
+...+.++++++|++++++++ +||+.+ | ++|-+.+|..++
T Consensus 153 ~p~~~~~~~~~l~~~p~~~l~-IGDs~~-D-i~aA~~aG~~~i 192 (229)
T PRK13226 153 HPLPLLVAAERIGVAPTDCVY-VGDDER-D-ILAARAAGMPSV 192 (229)
T ss_pred CHHHHHHHHHHhCCChhhEEE-eCCCHH-H-HHHHHHCCCcEE
Confidence 456689999999999999999 777777 8 999999997654
No 253
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=95.79 E-value=0.0086 Score=62.66 Aligned_cols=65 Identities=12% Similarity=0.092 Sum_probs=50.9
Q ss_pred EEEEecCCC--CcchhHHHHHHHHHHHhhccCCCeEEEEEc---CCCHHHHHHHHHh-CCCCCCCCCEEEEcCCce
Q 002660 615 FVISVDCDS--TTGLLDATKKICEAVEKERTEGSIGFILST---SMTISEIHSFLVS-GHLSPSDFDAFICNSGSD 684 (895)
Q Consensus 615 i~~DiDGTL--~~~~~~~~~~~l~~l~~~g~~~g~~v~iaT---GR~~~~~~~~l~~-l~l~~~~~d~~I~~nGa~ 684 (895)
++||+|||| .....+.+.++++.++++ |+.+++.| ||+...+.+.+.+ ++++. .++-+|++..+.
T Consensus 1 ~lfD~DGvL~~~~~~~~~a~e~i~~l~~~----g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~-~~~~iits~~~~ 71 (236)
T TIGR01460 1 FLFDIDGVLWLGHKPIPGAAEALNRLRAK----GKPVVFLTNNSSRSEEDYAEKLSSLLGVDV-SPDQIITSGSVT 71 (236)
T ss_pred CEEeCcCccCcCCccCcCHHHHHHHHHHC----CCeEEEEECCCCCCHHHHHHHHHHhcCCCC-CHHHeeeHHHHH
Confidence 579999999 345556888999999987 58888887 9999999998888 78752 456677765443
No 254
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=95.71 E-value=0.016 Score=60.85 Aligned_cols=66 Identities=9% Similarity=0.045 Sum_probs=48.1
Q ss_pred cCeEEEEEecCCCC--cchhHHHHHHHHHHHhhccCCCeEEEEEcCC--CHHHHHHHHHhCCCCCCCCCEEEEc
Q 002660 611 RKHIFVISVDCDST--TGLLDATKKICEAVEKERTEGSIGFILSTSM--TISEIHSFLVSGHLSPSDFDAFICN 680 (895)
Q Consensus 611 ~~kli~~DiDGTL~--~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR--~~~~~~~~l~~l~l~~~~~d~~I~~ 680 (895)
..++++||+||||. ..+.+.+.+++++|+++ |+.++|+|.. +...+.+.++.+|+..+.+|.++++
T Consensus 7 ~~~~~~~D~dG~l~~~~~~~pga~e~L~~L~~~----G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s 76 (242)
T TIGR01459 7 DYDVFLLDLWGVIIDGNHTYPGAVQNLNKIIAQ----GKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISS 76 (242)
T ss_pred cCCEEEEecccccccCCccCccHHHHHHHHHHC----CCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEcc
Confidence 45689999999993 45678899999999998 5888886554 4444447889999851135655553
No 255
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=95.66 E-value=0.085 Score=52.79 Aligned_cols=42 Identities=10% Similarity=0.066 Sum_probs=32.1
Q ss_pred ecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEE
Q 002660 792 IPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTV 839 (895)
Q Consensus 792 ~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gV 839 (895)
.+.|..|+..++.+.+.+ ++++++ +||+.+ | ++|.+.++.-.
T Consensus 144 ~~~g~~K~~~~~~~~~~~---~~~~i~-iGD~~~-D-~~aa~~~d~~~ 185 (188)
T TIGR01489 144 CPCGCCKGKVIHKLSEPK---YQHIIY-IGDGVT-D-VCPAKLSDVVF 185 (188)
T ss_pred CCCCCCHHHHHHHHHhhc---CceEEE-ECCCcc-h-hchHhcCCccc
Confidence 356778999999988865 566766 888887 8 99988876543
No 256
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=95.62 E-value=0.019 Score=55.27 Aligned_cols=53 Identities=8% Similarity=0.016 Sum_probs=41.1
Q ss_pred eEEEEEecCCCCc-------------chhHHHHHHHHHHHhhccCCCeEEEEEcCCC---------------HHHHHHHH
Q 002660 613 HIFVISVDCDSTT-------------GLLDATKKICEAVEKERTEGSIGFILSTSMT---------------ISEIHSFL 664 (895)
Q Consensus 613 kli~~DiDGTL~~-------------~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~---------------~~~~~~~l 664 (895)
++++||+||||+. ..-+.+.++++.|+++ |+.++|+|..+ ...+...+
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~~----g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l 76 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRAA----GYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELL 76 (147)
T ss_pred CeEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHHC----CCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHH
Confidence 4789999999931 1356778999999998 59999999865 24566777
Q ss_pred HhCCC
Q 002660 665 VSGHL 669 (895)
Q Consensus 665 ~~l~l 669 (895)
+.+++
T Consensus 77 ~~~~l 81 (147)
T TIGR01656 77 RQLGV 81 (147)
T ss_pred HhCCC
Confidence 88877
No 257
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=95.61 E-value=0.15 Score=61.43 Aligned_cols=140 Identities=15% Similarity=0.132 Sum_probs=98.9
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCC-----cEEEEEecCCCccccccchHHHHHHHHHHHHh----c
Q 002660 309 TNPRKPVILALARPDPKKNITT-LVKAFGECRPLRELA-----NLTLIMGNRDGIDEMSSTSASVLLSVLKLIDK----Y 378 (895)
Q Consensus 309 ~~~~~~~il~vgrl~~~Kgi~~-ll~A~~~l~~~~~~~-----~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~----~ 378 (895)
.+++...++++-|+...|...+ ++..+.++.+....| ..++|.|+...+... ..++++..|+..++. -
T Consensus 526 ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~--~aK~iIklI~~va~~in~Dp 603 (797)
T cd04300 526 VDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYY--MAKLIIKLINAVADVVNNDP 603 (797)
T ss_pred cCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcH--HHHHHHHHHHHHHHHhccCh
Confidence 4678889999999999998877 666554443322222 244555544332221 235667777777764 2
Q ss_pred CCCC--cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCchHHHHHHHcCCCEEEcCCCCchhcccc--CCCeEE
Q 002660 379 DLYG--QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV--LDNGLL 452 (895)
Q Consensus 379 ~l~~--~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~--~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~--~~~g~l 452 (895)
.+.+ +|.|+....-.--..++.+| ||-.+.|. .|..|..-+=+|.-|.+.|+|..|...|+.+. ..|+++
T Consensus 604 ~v~~~lkVVFlenY~VslAe~iipaa----Dvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vG~eN~fi 679 (797)
T cd04300 604 DVGDKLKVVFLPNYNVSLAEKIIPAA----DLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFI 679 (797)
T ss_pred hcCCceEEEEeCCCChHHHHHhhhhh----hhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHhCcCcEEE
Confidence 3444 68888776555555666667 99998887 78889888999999999999999999999876 678888
Q ss_pred eC
Q 002660 453 VD 454 (895)
Q Consensus 453 v~ 454 (895)
|-
T Consensus 680 FG 681 (797)
T cd04300 680 FG 681 (797)
T ss_pred eC
Confidence 84
No 258
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=95.53 E-value=0.026 Score=55.57 Aligned_cols=54 Identities=7% Similarity=0.081 Sum_probs=44.9
Q ss_pred CeEEEEEecCCC-C----------------------------cchhHHHHHHHHHHHhhccCCCeEEEEEcCC-CHHHHH
Q 002660 612 KHIFVISVDCDS-T----------------------------TGLLDATKKICEAVEKERTEGSIGFILSTSM-TISEIH 661 (895)
Q Consensus 612 ~kli~~DiDGTL-~----------------------------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR-~~~~~~ 661 (895)
.||++||+|+|| + ...-+.+.++|+.|+++ |+.++|+|+. +...+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~----G~~l~I~Sn~~~~~~~~ 77 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDA----GTYLATASWNDVPEWAY 77 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHC----CCEEEEEeCCCChHHHH
Confidence 379999999999 0 12346789999999987 5999999998 888888
Q ss_pred HHHHhCCC
Q 002660 662 SFLVSGHL 669 (895)
Q Consensus 662 ~~l~~l~l 669 (895)
..++.+++
T Consensus 78 ~~L~~~~l 85 (174)
T TIGR01685 78 EILGTFEI 85 (174)
T ss_pred HHHHhCCc
Confidence 88888887
No 259
>PLN02555 limonoid glucosyltransferase
Probab=95.47 E-value=6.8 Score=45.45 Aligned_cols=82 Identities=16% Similarity=0.160 Sum_probs=52.3
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCC----chhccccC-CCeEEeC--
Q 002660 382 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHRVL-DNGLLVD-- 454 (895)
Q Consensus 382 ~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg----~~eiv~~~-~~g~lv~-- 454 (895)
+++.+.+++|+.+ ++... +.++||.- +--.+.+||+.+|+|+|+...-+ ...++.+. +.|+.+.
T Consensus 337 ~~g~v~~W~PQ~~---iL~H~--~v~~FvtH----~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~ 407 (480)
T PLN02555 337 DKGKIVQWCPQEK---VLAHP--SVACFVTH----CGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRG 407 (480)
T ss_pred CceEEEecCCHHH---HhCCC--ccCeEEec----CCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCC
Confidence 5667778888754 44332 11566532 33468899999999999976533 12222232 5676662
Q ss_pred -----CCCHHHHHHHHHHHHhCH
Q 002660 455 -----PHDQQSVADALLKLVADK 472 (895)
Q Consensus 455 -----p~d~~~la~ai~~ll~~~ 472 (895)
.-+.++++++|+++++++
T Consensus 408 ~~~~~~v~~~~v~~~v~~vm~~~ 430 (480)
T PLN02555 408 EAENKLITREEVAECLLEATVGE 430 (480)
T ss_pred ccccCcCcHHHHHHHHHHHhcCc
Confidence 125789999999999754
No 260
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=95.36 E-value=0.12 Score=61.77 Aligned_cols=140 Identities=16% Similarity=0.179 Sum_probs=97.9
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCC-----cEEEEEecCCCccccccchHHHHHHHHHHHHhcC---
Q 002660 309 TNPRKPVILALARPDPKKNITT-LVKAFGECRPLRELA-----NLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYD--- 379 (895)
Q Consensus 309 ~~~~~~~il~vgrl~~~Kgi~~-ll~A~~~l~~~~~~~-----~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~--- 379 (895)
.+++...++++-|+...|...+ ++..+.++......| ..++|.|+...... ...+.++..|+..++..+
T Consensus 525 ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y--~~aK~iIklI~~va~~in~Dp 602 (798)
T PRK14985 525 INPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGY--YLAKNIIFAINKVAEVINNDP 602 (798)
T ss_pred cCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCc--HHHHHHHHHHHHHHHHhcCCh
Confidence 4567788899999999998777 666655443333332 24455544332221 123556677777775542
Q ss_pred -CCC--cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCchHHHHHHHcCCCEEEcCCCCchhcccc--CCCeEE
Q 002660 380 -LYG--QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV--LDNGLL 452 (895)
Q Consensus 380 -l~~--~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~--~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~--~~~g~l 452 (895)
..+ +|.|+....-.--..++..| ||-.+.|. .|..|..=+=+|.-|.+.|+|-.|...|+.+. +.||++
T Consensus 603 ~v~~~lkVVFlenY~VslAe~lipaa----Dvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN~f~ 678 (798)
T PRK14985 603 LVGDKLKVVFLPDYCVSAAELLIPAA----DISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFI 678 (798)
T ss_pred hhCCceeEEEeCCCChHHHHHHhhhh----hhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcCcEEE
Confidence 334 68888776655555666777 99999887 78899988999999999999999999998875 678888
Q ss_pred eC
Q 002660 453 VD 454 (895)
Q Consensus 453 v~ 454 (895)
+-
T Consensus 679 fG 680 (798)
T PRK14985 679 FG 680 (798)
T ss_pred eC
Confidence 84
No 261
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=95.15 E-value=0.043 Score=53.52 Aligned_cols=55 Identities=13% Similarity=0.120 Sum_probs=42.2
Q ss_pred CeEEEEEecCCCCcc--------------hhHHHHHHHHHHHhhccCCCeEEEEEcCC---------------CHHHHHH
Q 002660 612 KHIFVISVDCDSTTG--------------LLDATKKICEAVEKERTEGSIGFILSTSM---------------TISEIHS 662 (895)
Q Consensus 612 ~kli~~DiDGTL~~~--------------~~~~~~~~l~~l~~~g~~~g~~v~iaTGR---------------~~~~~~~ 662 (895)
+|++|||.||||... +-+.+.++|+.|+++ |+.++|+|-- +...+..
T Consensus 1 ~~~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~----g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~ 76 (161)
T TIGR01261 1 QKILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKKA----GYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQ 76 (161)
T ss_pred CCEEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHHC----CCeEEEEeCCccccCCcCCHHHHHHHHHHHHH
Confidence 478999999999431 225588999999997 5999999864 3456777
Q ss_pred HHHhCCCC
Q 002660 663 FLVSGHLS 670 (895)
Q Consensus 663 ~l~~l~l~ 670 (895)
+++.+|+.
T Consensus 77 ~l~~~gl~ 84 (161)
T TIGR01261 77 IFRSQGII 84 (161)
T ss_pred HHHHCCCc
Confidence 88998883
No 262
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=95.04 E-value=0.044 Score=54.75 Aligned_cols=42 Identities=5% Similarity=0.024 Sum_probs=33.7
Q ss_pred cCeEEEEEecCCCC------------cchhHHHHHHHHHHHhhccCCCeEEEEEcCCC
Q 002660 611 RKHIFVISVDCDST------------TGLLDATKKICEAVEKERTEGSIGFILSTSMT 656 (895)
Q Consensus 611 ~~kli~~DiDGTL~------------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~ 656 (895)
..|+++||.||||. -.+.+.+.++|++|+++ |+.++|+|..+
T Consensus 2 ~~~~~~~d~~~t~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~----g~~l~I~Tn~~ 55 (181)
T PRK08942 2 SMKAIFLDRDGVINVDSDGYVKSPDEWIPIPGSIEAIARLKQA----GYRVVVATNQS 55 (181)
T ss_pred CccEEEEECCCCcccCCccccCCHHHeEECCCHHHHHHHHHHC----CCEEEEEeCCc
Confidence 36899999999992 12345678999999987 59999999876
No 263
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=94.95 E-value=0.046 Score=63.28 Aligned_cols=66 Identities=12% Similarity=0.195 Sum_probs=50.0
Q ss_pred cccCeEEEEEecCCCC--cc-------------hhHHHHHHHHHHHhhccCCCeEEEEEcCCCH------------HHHH
Q 002660 609 RRRKHIFVISVDCDST--TG-------------LLDATKKICEAVEKERTEGSIGFILSTSMTI------------SEIH 661 (895)
Q Consensus 609 ~~~~kli~~DiDGTL~--~~-------------~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~------------~~~~ 661 (895)
....|++|||+||||. .. ..+.+.+.|++|+++ |+.++|+|--+- ..+.
T Consensus 165 ~~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~----Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~ 240 (526)
T TIGR01663 165 KGQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEAD----GFKICIFTNQGGIARGKINADDFKAKIE 240 (526)
T ss_pred CccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHC----CCEEEEEECCcccccCcccHHHHHHHHH
Confidence 4567999999999993 11 245678899999988 599999997544 3467
Q ss_pred HHHHhCCCCCCCCCEEEEcC
Q 002660 662 SFLVSGHLSPSDFDAFICNS 681 (895)
Q Consensus 662 ~~l~~l~l~~~~~d~~I~~n 681 (895)
.+++.++++ ++.++|..
T Consensus 241 ~iL~~lgip---fdviia~~ 257 (526)
T TIGR01663 241 AIVAKLGVP---FQVFIAIG 257 (526)
T ss_pred HHHHHcCCc---eEEEEeCC
Confidence 889999984 57777654
No 264
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=94.84 E-value=0.43 Score=56.66 Aligned_cols=140 Identities=12% Similarity=0.165 Sum_probs=83.8
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HH---HHHHhccccc--CCCcEEEEEecCCCccccccchHHHHHHHHHHHHhc----
Q 002660 309 TNPRKPVILALARPDPKKNITT-LV---KAFGECRPLR--ELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY---- 378 (895)
Q Consensus 309 ~~~~~~~il~vgrl~~~Kgi~~-ll---~A~~~l~~~~--~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~---- 378 (895)
++++...++++-|+...|...+ ++ .-+.++++.. ....+++|+|+...+... ..++++..|+..++..
T Consensus 440 ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~d~--~gK~iIk~I~~va~~in~Dp 517 (713)
T PF00343_consen 440 LDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPGDY--MGKEIIKLINNVAEVINNDP 517 (713)
T ss_dssp --TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT-H--HHHHHHHHHHHHHHHHCT-T
T ss_pred CCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCCcH--HHHHHHHHHHHHHHHHhcCh
Confidence 4567788899999999998776 33 4444454321 112344555543322221 2345666666666532
Q ss_pred CCCC--cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCchHHHHHHHcCCCEEEcCCCCchhcccc--CCCeEE
Q 002660 379 DLYG--QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV--LDNGLL 452 (895)
Q Consensus 379 ~l~~--~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~--~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~--~~~g~l 452 (895)
.+.+ +|.|+...+-.--..++..+ ||-++.|+ .|..|..-+=+|.-|.+.+++..|...|+.+. .+|.++
T Consensus 518 ~v~~~lkVvFlenYdvslA~~lipg~----DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~eN~fi 593 (713)
T PF00343_consen 518 EVGDRLKVVFLENYDVSLAEKLIPGV----DVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGEENIFI 593 (713)
T ss_dssp TTCCGEEEEEETT-SHHHHHHHGGG-----SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-GGGSEE
T ss_pred hhccceeEEeecCCcHHHHHHHhhhh----hhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhcCCCcEEE
Confidence 3344 67887776544444555666 99999987 79999999999999999999999999998753 346677
Q ss_pred eC
Q 002660 453 VD 454 (895)
Q Consensus 453 v~ 454 (895)
+-
T Consensus 594 FG 595 (713)
T PF00343_consen 594 FG 595 (713)
T ss_dssp ES
T ss_pred cC
Confidence 63
No 265
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=94.82 E-value=0.21 Score=59.95 Aligned_cols=140 Identities=14% Similarity=0.112 Sum_probs=97.7
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCC-----cEEEEEecCCCccccccchHHHHHHHHHHHHhc----
Q 002660 309 TNPRKPVILALARPDPKKNITT-LVKAFGECRPLRELA-----NLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY---- 378 (895)
Q Consensus 309 ~~~~~~~il~vgrl~~~Kgi~~-ll~A~~~l~~~~~~~-----~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~---- 378 (895)
.+++...++++-|+...|...+ ++..+.++......| ..++|.|+...+... ..+.++..|+..++..
T Consensus 523 ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~--~aK~iIklI~~va~~iN~Dp 600 (794)
T TIGR02093 523 VDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYH--MAKLIIKLINSVAEVVNNDP 600 (794)
T ss_pred cCccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcH--HHHHHHHHHHHHHHHhccCh
Confidence 4577788899999999998777 666655443333332 234555443322221 2355667777776442
Q ss_pred CCCC--cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCchHHHHHHHcCCCEEEcCCCCchhcccc--CCCeEE
Q 002660 379 DLYG--QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV--LDNGLL 452 (895)
Q Consensus 379 ~l~~--~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~--~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~--~~~g~l 452 (895)
...+ +|.|+....-.--..++..| ||-.+.|. .|..|..-+=+|.-|.+.|+|..|...|+.+. ..|+++
T Consensus 601 ~v~~~lkVVFlenY~VslAe~iipaa----Dvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN~fi 676 (794)
T TIGR02093 601 AVGDKLKVVFVPNYNVSLAELIIPAA----DLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFI 676 (794)
T ss_pred hhCCceeEEEeCCCChHHHHHhhhhh----hhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCcccEEE
Confidence 2344 68888876655555666777 99998887 78899988999999999999999999999876 678887
Q ss_pred eC
Q 002660 453 VD 454 (895)
Q Consensus 453 v~ 454 (895)
|-
T Consensus 677 FG 678 (794)
T TIGR02093 677 FG 678 (794)
T ss_pred cC
Confidence 74
No 266
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=94.80 E-value=0.28 Score=50.68 Aligned_cols=45 Identities=11% Similarity=0.009 Sum_probs=37.8
Q ss_pred CCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEec
Q 002660 795 LASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 842 (895)
Q Consensus 795 g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMg 842 (895)
+=.+...++.+++++|++++++++ +||+.+ | +++-+.+|..++.-
T Consensus 147 ~Kp~~~~~~~~~~~~~~~~~~~~~-igDs~~-D-i~aA~~aG~~~i~v 191 (222)
T PRK10826 147 SKPHPEVYLNCAAKLGVDPLTCVA-LEDSFN-G-MIAAKAARMRSIVV 191 (222)
T ss_pred CCCCHHHHHHHHHHcCCCHHHeEE-EcCChh-h-HHHHHHcCCEEEEe
Confidence 334567899999999999999998 888887 8 99999999776553
No 267
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=94.78 E-value=0.094 Score=55.34 Aligned_cols=67 Identities=7% Similarity=0.068 Sum_probs=47.6
Q ss_pred ccCeEEEEEecCCCC-----------------------------cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHH--
Q 002660 610 RRKHIFVISVDCDST-----------------------------TGLLDATKKICEAVEKERTEGSIGFILSTSMTIS-- 658 (895)
Q Consensus 610 ~~~kli~~DiDGTL~-----------------------------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~-- 658 (895)
..+..|+||||+|+. ....+.+.++++.|+++ |+.++|+|+|+..
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~----G~~v~iVTnR~~~~~ 148 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSK----GVKIFYVSNRSEKEK 148 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHC----CCeEEEEeCCCcchH
Confidence 345699999999991 11335678899999887 5999999999844
Q ss_pred -HHHHHHHhCCCCCCCCCEEEEc
Q 002660 659 -EIHSFLVSGHLSPSDFDAFICN 680 (895)
Q Consensus 659 -~~~~~l~~l~l~~~~~d~~I~~ 680 (895)
.....++.+|++....+.++..
T Consensus 149 ~~T~~~Lkk~Gi~~~~~d~lllr 171 (266)
T TIGR01533 149 AATLKNLKRFGFPQADEEHLLLK 171 (266)
T ss_pred HHHHHHHHHcCcCCCCcceEEeC
Confidence 4557888889842122455554
No 268
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=94.57 E-value=0.065 Score=53.25 Aligned_cols=40 Identities=13% Similarity=0.211 Sum_probs=32.4
Q ss_pred eEEEEEecCCCCc-----------chhHHHHHHHHHHHhhccCCCeEEEEEcCCC
Q 002660 613 HIFVISVDCDSTT-----------GLLDATKKICEAVEKERTEGSIGFILSTSMT 656 (895)
Q Consensus 613 kli~~DiDGTL~~-----------~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~ 656 (895)
|++|+|.||||.. ...+.+.++|++|+++ |+.++|+|.-+
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~----G~~l~i~TN~~ 52 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKKM----GYALVLVTNQS 52 (176)
T ss_pred CEEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHHC----CCEEEEEeCCc
Confidence 7899999999941 1235689999999997 59999999765
No 269
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=94.52 E-value=0.29 Score=57.95 Aligned_cols=55 Identities=7% Similarity=-0.035 Sum_probs=45.6
Q ss_pred ccCeEEEEEecCCCCcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 610 RRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 610 ~~~kli~~DiDGTL~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
....|.|+-+=|=++ .+.+.++++++.+++. |+.|...||-+...+..+.+++|+
T Consensus 569 ~E~~LtFvGlVGi~D-PPR~ev~~ai~~c~~a----GIrV~mITGD~~~TA~AI~r~iGi 623 (972)
T KOG0202|consen 569 AESDLTFVGLVGILD-PPRPEVADAIELCRQA----GIRVIMITGDNKETAEAIAREIGI 623 (972)
T ss_pred cccceEEEEEeeccC-CCchhHHHHHHHHHHc----CCEEEEEcCCCHHHHHHHHHHhCC
Confidence 344677777666654 3556889999999998 699999999999999999999997
No 270
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=94.52 E-value=0.08 Score=52.26 Aligned_cols=55 Identities=7% Similarity=0.009 Sum_probs=44.8
Q ss_pred cCeEEEEEecCCCC----cchhHHHHHHHHHHHhhccCCCeEEEEEcCCC-HHHHHHHHHhCCC
Q 002660 611 RKHIFVISVDCDST----TGLLDATKKICEAVEKERTEGSIGFILSTSMT-ISEIHSFLVSGHL 669 (895)
Q Consensus 611 ~~kli~~DiDGTL~----~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~-~~~~~~~l~~l~l 669 (895)
.-+++++|+||||+ ....+.+.++|+.|+++ |+.++|+|+.+ ...+..+++.+++
T Consensus 24 ~v~~vv~D~Dgtl~~~~~~~~~pgv~e~L~~Lk~~----g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 24 GIKGVVLDKDNTLVYPDHNEAYPALRDWIEELKAA----GRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CCCEEEEecCCccccCCCCCcChhHHHHHHHHHHc----CCEEEEEeCCchHHHHHHHHHHcCC
Confidence 45799999999994 24667889999999998 59999999998 5666667777776
No 271
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=94.48 E-value=0.027 Score=57.10 Aligned_cols=46 Identities=20% Similarity=0.252 Sum_probs=41.1
Q ss_pred CChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEecCc
Q 002660 796 ASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGI 844 (895)
Q Consensus 796 ~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgNa 844 (895)
.+|+.+++.+++.+|++++++++ +||+.+ | ++|++.+|+++|++..
T Consensus 146 ~~k~~~~~~~~~~~~~~~~~~i~-iGDs~~-D-~~~a~~ag~~~a~~~~ 191 (201)
T TIGR01491 146 DNKGEAVERLKRELNPSLTETVA-VGDSKN-D-LPMFEVADISISLGDE 191 (201)
T ss_pred ccHHHHHHHHHHHhCCCHHHEEE-EcCCHh-H-HHHHHhcCCeEEECCC
Confidence 47999999999999999999988 778877 8 9999999999999643
No 272
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=94.44 E-value=0.27 Score=50.42 Aligned_cols=45 Identities=9% Similarity=0.008 Sum_probs=37.9
Q ss_pred cCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEE
Q 002660 793 PVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVI 840 (895)
Q Consensus 793 p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVa 840 (895)
..+-.|...++++++++|+++++++. +||+.+ | +++-+.+|..++
T Consensus 135 ~~~Kp~p~~~~~~~~~~~~~~~~~~~-iGDs~~-D-i~aa~~aG~~~i 179 (214)
T PRK13288 135 EHAKPDPEPVLKALELLGAKPEEALM-VGDNHH-D-ILAGKNAGTKTA 179 (214)
T ss_pred CCCCCCcHHHHHHHHHcCCCHHHEEE-ECCCHH-H-HHHHHHCCCeEE
Confidence 34446788999999999999999998 888887 8 999999997654
No 273
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=94.43 E-value=0.047 Score=53.67 Aligned_cols=89 Identities=18% Similarity=0.207 Sum_probs=58.8
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCC--------chhccccCCCeEEe
Q 002660 382 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG--------PVDIHRVLDNGLLV 453 (895)
Q Consensus 382 ~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg--------~~eiv~~~~~g~lv 453 (895)
.+|.+.++ .+++.++++.| |++|.- +-+.++.|++++|+|.|.-.... ....+.....|..+
T Consensus 55 ~~v~~~~~--~~~m~~~m~~a----DlvIs~----aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~ 124 (167)
T PF04101_consen 55 PNVKVFGF--VDNMAELMAAA----DLVISH----AGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIML 124 (167)
T ss_dssp CCCEEECS--SSSHHHHHHHH----SEEEEC----S-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCS
T ss_pred CcEEEEec--hhhHHHHHHHc----CEEEeC----CCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCcccc
Confidence 57888888 45799999999 987754 45689999999999998766544 12223333444444
Q ss_pred CCC--CHHHHHHHHHHHHhCHHHHHHHHH
Q 002660 454 DPH--DQQSVADALLKLVADKQLWARCRQ 480 (895)
Q Consensus 454 ~p~--d~~~la~ai~~ll~~~~~~~~~~~ 480 (895)
... +++.+.++|.+++.++.....+.+
T Consensus 125 ~~~~~~~~~L~~~i~~l~~~~~~~~~~~~ 153 (167)
T PF04101_consen 125 DESELNPEELAEAIEELLSDPEKLKEMAK 153 (167)
T ss_dssp ECCC-SCCCHHHHHHCHCCCHH-SHHHCC
T ss_pred CcccCCHHHHHHHHHHHHcCcHHHHHHHH
Confidence 322 357799999999998876555443
No 274
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=94.38 E-value=0.054 Score=58.98 Aligned_cols=56 Identities=4% Similarity=-0.096 Sum_probs=47.2
Q ss_pred ccCeEEEEEecCCCCc---------------chhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 610 RRKHIFVISVDCDSTT---------------GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 610 ~~~kli~~DiDGTL~~---------------~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
...+++++|+|||+.. .+.+.+.++++.|+++ |+.++|+|||+.......++.+++
T Consensus 156 ~~~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~----g~~i~i~T~r~~~~~~~~l~~l~~ 226 (300)
T PHA02530 156 GLPKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAA----GYEIIVVSGRDGVCEEDTVEWLRQ 226 (300)
T ss_pred CCCCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhC----CCEEEEEeCCChhhHHHHHHHHHH
Confidence 3457999999999931 3567889999999887 599999999999999888888776
No 275
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=93.96 E-value=0.13 Score=56.58 Aligned_cols=55 Identities=9% Similarity=0.084 Sum_probs=46.8
Q ss_pred cCeEEEEEecCCCC------c--------chhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHh----CCC
Q 002660 611 RKHIFVISVDCDST------T--------GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVS----GHL 669 (895)
Q Consensus 611 ~~kli~~DiDGTL~------~--------~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~----l~l 669 (895)
.+|+|++|+|+||- . ...+.+.++|+.|+++ |+.++|||-.+...+...++. +++
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~~----Gi~lai~S~n~~~~a~~~l~~~~~~~~~ 74 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKKQ----GFLLALASKNDEDDAKKVFERRKDFILQ 74 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHhC----CCEEEEEcCCCHHHHHHHHHhCccccCc
Confidence 36899999999991 1 2346789999999987 699999999999999999998 766
No 276
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=93.92 E-value=0.27 Score=51.06 Aligned_cols=35 Identities=11% Similarity=0.084 Sum_probs=27.4
Q ss_pred HHHHHHHHHhhccCCCeEEEEEcCCC----HHHHHHHHHhCCC
Q 002660 631 TKKICEAVEKERTEGSIGFILSTSMT----ISEIHSFLVSGHL 669 (895)
Q Consensus 631 ~~~~l~~l~~~g~~~g~~v~iaTGR~----~~~~~~~l~~l~l 669 (895)
.+++|+.++++ |+.++++|||+ ...+..+++.+++
T Consensus 119 a~elL~~L~~~----G~~I~iVTnR~~~k~~~t~~~Llk~~gi 157 (237)
T PRK11009 119 ARQLIDMHVKR----GDSIYFITGRTATKTETVSKTLADDFHI 157 (237)
T ss_pred HHHHHHHHHHC----CCeEEEEeCCCCcccHHHHHHHHHHcCC
Confidence 78889999887 69999999996 3355556666888
No 277
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=93.78 E-value=0.21 Score=47.67 Aligned_cols=57 Identities=5% Similarity=0.019 Sum_probs=50.4
Q ss_pred ccCeEEEEEecCCC----CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCC
Q 002660 610 RRKHIFVISVDCDS----TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 670 (895)
Q Consensus 610 ~~~kli~~DiDGTL----~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~ 670 (895)
.-.|-|++|+|.|| ....+++.++.+..++++ |+.++|.|--+..-+..+.+.++++
T Consensus 26 ~Gikgvi~DlDNTLv~wd~~~~tpe~~~W~~e~k~~----gi~v~vvSNn~e~RV~~~~~~l~v~ 86 (175)
T COG2179 26 HGIKGVILDLDNTLVPWDNPDATPELRAWLAELKEA----GIKVVVVSNNKESRVARAAEKLGVP 86 (175)
T ss_pred cCCcEEEEeccCceecccCCCCCHHHHHHHHHHHhc----CCEEEEEeCCCHHHHHhhhhhcCCc
Confidence 45678999999999 367788999999999998 5999999999999999999999984
No 278
>PRK08238 hypothetical protein; Validated
Probab=93.64 E-value=0.19 Score=57.98 Aligned_cols=48 Identities=15% Similarity=0.177 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCce
Q 002660 629 DATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSD 684 (895)
Q Consensus 629 ~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~ 684 (895)
+...+.+++++++ |+.++|+|+.+...+..+++.+|+ +|.+||.++..
T Consensus 75 pga~e~L~~lk~~----G~~v~LaTas~~~~a~~i~~~lGl----Fd~Vigsd~~~ 122 (479)
T PRK08238 75 EEVLDYLRAERAA----GRKLVLATASDERLAQAVAAHLGL----FDGVFASDGTT 122 (479)
T ss_pred hhHHHHHHHHHHC----CCEEEEEeCCCHHHHHHHHHHcCC----CCEEEeCCCcc
Confidence 5678888888887 699999999999999999999997 57899987654
No 279
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=93.56 E-value=0.59 Score=51.92 Aligned_cols=42 Identities=10% Similarity=0.090 Sum_probs=35.0
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEe
Q 002660 797 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 797 sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaM 841 (895)
-+...+...++.+|++++++++ +||+.. | ++.=+.+|..++.
T Consensus 273 P~Peifl~A~~~lgl~Peecl~-IGDS~~-D-IeAAk~AGm~~Ig 314 (381)
T PLN02575 273 PDPEMFIYAAQLLNFIPERCIV-FGNSNQ-T-VEAAHDARMKCVA 314 (381)
T ss_pred CCHHHHHHHHHHcCCCcccEEE-EcCCHH-H-HHHHHHcCCEEEE
Confidence 3567889999999999999999 788777 8 9999999975544
No 280
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=93.39 E-value=0.19 Score=48.38 Aligned_cols=54 Identities=11% Similarity=0.022 Sum_probs=44.1
Q ss_pred cCeEEEEEecCCCCc-----------------------------chhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHH
Q 002660 611 RKHIFVISVDCDSTT-----------------------------GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIH 661 (895)
Q Consensus 611 ~~kli~~DiDGTL~~-----------------------------~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~ 661 (895)
+|+++++|+||||.. ..-+.+.+.|+.|+ + ++.++|+|.-+...+.
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~-~----~~~l~I~Ts~~~~~~~ 75 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRAS-E----LFELVVFTAGLRMYAD 75 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHH-h----ccEEEEEeCCcHHHHH
Confidence 478999999999910 12456788999997 4 4899999999999999
Q ss_pred HHHHhCCC
Q 002660 662 SFLVSGHL 669 (895)
Q Consensus 662 ~~l~~l~l 669 (895)
.+++.+++
T Consensus 76 ~il~~l~~ 83 (148)
T smart00577 76 PVLDLLDP 83 (148)
T ss_pred HHHHHhCc
Confidence 99998877
No 281
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.35 E-value=0.47 Score=49.51 Aligned_cols=140 Identities=19% Similarity=0.253 Sum_probs=83.7
Q ss_pred CCCCCCHHHHHHHHHhcccccCCCcEEE---EEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCC------CCCC
Q 002660 322 PDPKKNITTLVKAFGECRPLRELANLTL---IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPK------HHKQ 392 (895)
Q Consensus 322 l~~~Kgi~~ll~A~~~l~~~~~~~~l~l---ivG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g------~~~~ 392 (895)
.+...|+..++.++..+..... .+++ ++..-+ ..-+..+.++.+|.+.-...+ ++++
T Consensus 237 pea~~nl~~il~slcal~~~~a--~vvfw~ai~~~lp------------l~~l~~l~e~~gWq~~ad~~~kdnc~l~lsq 302 (412)
T COG4370 237 PEAQTNLAVILGSLCALPAMFA--LVVFWAAIAPELP------------LLLLWTLEERQGWQPLADRFGKDNCSLWLSQ 302 (412)
T ss_pred hHHHhhHHHHHHHHhhhHHHHH--HHHHHhccCcCCC------------HHHHHHHHHhcCcchhhhhhccCceEEEEeH
Confidence 5667899999987766642111 1222 222222 244556666666654322111 3446
Q ss_pred CCHHHHHHHhhcCCcEEEecCCCCCCchHHHH-HHHcCCCEEEcCCCCch------hccc--cCCCeEEeCCCCHHHHHH
Q 002660 393 SDVPEIYRLAAKTKGVFINPAFIEPFGLTLIE-AAAHGLPIVATKNGGPV------DIHR--VLDNGLLVDPHDQQSVAD 463 (895)
Q Consensus 393 ~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~E-a~a~G~PVvas~~gg~~------eiv~--~~~~g~lv~p~d~~~la~ 463 (895)
....+.+..| |+.+ +|.-+..| ++..|+|||+..--|+. +--. -+..-.+++|. .+-++
T Consensus 303 qsfadiLH~a----daal------gmAGTAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~~~--aq~a~ 370 (412)
T COG4370 303 QSFADILHAA----DAAL------GMAGTATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVRPE--AQAAA 370 (412)
T ss_pred HHHHHHHHHH----HHHH------HhccchHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecCCc--hhhHH
Confidence 6788899998 7754 45445544 67789999998754442 2100 02233566643 34455
Q ss_pred HHHH-HHhCHHHHHHHHHHHHHHhh
Q 002660 464 ALLK-LVADKQLWARCRQNGLKNIH 487 (895)
Q Consensus 464 ai~~-ll~~~~~~~~~~~~~~~~~~ 487 (895)
.+.+ ++.|++....++.++++++-
T Consensus 371 ~~~q~ll~dp~r~~air~nGqrRiG 395 (412)
T COG4370 371 QAVQELLGDPQRLTAIRHNGQRRIG 395 (412)
T ss_pred HHHHHHhcChHHHHHHHhcchhhcc
Confidence 5544 99999999999999999983
No 282
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=93.35 E-value=0.21 Score=51.65 Aligned_cols=43 Identities=19% Similarity=0.159 Sum_probs=35.6
Q ss_pred hHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcc---eEEEecC
Q 002660 798 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVH---KTVILKG 843 (895)
Q Consensus 798 Kg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag---~gVaMgN 843 (895)
.-..+..+++.+|+++++++. +||+.+ | +.|=+.|| .||..|.
T Consensus 147 ~P~~l~~~~~~~~~~~~~~l~-VGDs~~-D-i~aA~~Ag~~~v~v~~g~ 192 (220)
T COG0546 147 DPEPLLLLLEKLGLDPEEALM-VGDSLN-D-ILAAKAAGVPAVGVTWGY 192 (220)
T ss_pred CHHHHHHHHHHhCCChhheEE-ECCCHH-H-HHHHHHcCCCEEEEECCC
Confidence 457888999999999767777 999988 9 99999999 5566664
No 283
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=93.34 E-value=0.47 Score=56.16 Aligned_cols=166 Identities=14% Similarity=0.042 Sum_probs=92.1
Q ss_pred chhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcCCceEeeccCCCCCCCcccchhhHH
Q 002660 626 GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHS 705 (895)
Q Consensus 626 ~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~~~~~~~~~~~~~~~~~ 705 (895)
.+...+-+++.+.+.. |++++..||+.+..+..+.+..|+ |..+ +++..
T Consensus 590 PPR~~vP~Av~~CrsA----GIkvimVTgdhpiTAkAiA~~vgI--------i~~~-~et~e------------------ 638 (1019)
T KOG0203|consen 590 PPRAAVPDAVGKCRSA----GIKVIMVTGDHPITAKAIAKSVGI--------ISEG-SETVE------------------ 638 (1019)
T ss_pred CCcccCchhhhhhhhh----CceEEEEecCccchhhhhhhheee--------ecCC-chhhh------------------
Confidence 3445677888888888 599999999999999999888774 2222 22110
Q ss_pred HhhcccCcchHHHHHHhhhhhccccccccCCcccccccccCCceEEEEEeeCCCCCccHHHHHHHHHhccCeEEEEEecC
Q 002660 706 HIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQN 785 (895)
Q Consensus 706 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~s~~ 785 (895)
.+..+......+.. ....+........-..-.-+++.+.+..+ ...-+.++.+
T Consensus 639 ------------~~a~r~~~~v~~vn--------------~~~a~a~VihG~eL~~~~~~qld~il~nh-~eIVFARTSP 691 (1019)
T KOG0203|consen 639 ------------DIAKRLNIPVEQVN--------------SRDAKAAVIHGSELPDMSSEQLDELLQNH-QEIVFARTSP 691 (1019)
T ss_pred ------------hhHHhcCCcccccC--------------ccccceEEEecccccccCHHHHHHHHHhC-CceEEEecCc
Confidence 01111110000000 00111111111111111234666666543 2344445555
Q ss_pred CeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEecCccccccccccccCCCCCCCCCc
Q 002660 786 GSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMP 865 (895)
Q Consensus 786 ~~~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgNa~~~~~~~~~a~~~~~~~~~~~ 865 (895)
..-+=|+ .+ |+++| ++++.-||+-| | -+-|+.|++|||||=|- .++-++|.+ +.=
T Consensus 692 qQKLiIV-e~----------cQr~G----aiVaVTGDGVN-D-sPALKKADIGVAMGiaG--SDvsKqAAD------mIL 746 (1019)
T KOG0203|consen 692 QQKLIIV-EG----------CQRQG----AIVAVTGDGVN-D-SPALKKADIGVAMGIAG--SDVSKQAAD------MIL 746 (1019)
T ss_pred cceEEeE-hh----------hhhcC----cEEEEeCCCcC-C-Chhhcccccceeecccc--chHHHhhcc------eEE
Confidence 4223332 22 45554 48888999999 9 99999999999999876 555555544 333
Q ss_pred CCCCceEEc
Q 002660 866 IDSPNIVQT 874 (895)
Q Consensus 866 ~~~~~~~~v 874 (895)
+|...|..|
T Consensus 747 LDDNFASIV 755 (1019)
T KOG0203|consen 747 LDDNFASIV 755 (1019)
T ss_pred ecCcchhhe
Confidence 445555555
No 284
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=93.24 E-value=0.17 Score=55.80 Aligned_cols=55 Identities=11% Similarity=0.099 Sum_probs=42.7
Q ss_pred cCeEEEEEecCCCCc--------------chhHHHHHHHHHHHhhccCCCeEEEEEcCC---------------CHHHHH
Q 002660 611 RKHIFVISVDCDSTT--------------GLLDATKKICEAVEKERTEGSIGFILSTSM---------------TISEIH 661 (895)
Q Consensus 611 ~~kli~~DiDGTL~~--------------~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR---------------~~~~~~ 661 (895)
++|++|||.||||.. .+-+.+.++|+.|+++ |+.++|+|.- +...+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~~----G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~ 76 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQKA----GYKLVMVTNQDGLGTDSFPQEDFDPPHNLMM 76 (354)
T ss_pred CCcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHHhC----CCeEEEEECCccccCccccHHHHhhHHHHHH
Confidence 368999999999932 2345688999999887 5999999983 344566
Q ss_pred HHHHhCCC
Q 002660 662 SFLVSGHL 669 (895)
Q Consensus 662 ~~l~~l~l 669 (895)
.+++.+++
T Consensus 77 ~iL~~~gl 84 (354)
T PRK05446 77 QIFESQGI 84 (354)
T ss_pred HHHHHcCC
Confidence 78888887
No 285
>PLN02534 UDP-glycosyltransferase
Probab=93.13 E-value=21 Score=41.53 Aligned_cols=78 Identities=19% Similarity=0.140 Sum_probs=49.6
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcE--EEecCCCCCCchHHHHHHHcCCCEEEcCCCCchh-----ccccCCCeEEeC
Q 002660 382 GQVAYPKHHKQSDVPEIYRLAAKTKGV--FINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVD-----IHRVLDNGLLVD 454 (895)
Q Consensus 382 ~~v~~~g~~~~~el~~ly~~A~~~~dv--~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~e-----iv~~~~~g~lv~ 454 (895)
..+.+.+++|+. .++... ++ ||. -+-..+++||+++|+|+|+-...+-.- +++.-..|+-+.
T Consensus 344 ~g~~v~~w~pq~---~iL~h~----~v~~fvt----H~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~ 412 (491)
T PLN02534 344 RGLLIKGWAPQV---LILSHP----AIGGFLT----HCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVG 412 (491)
T ss_pred CCeeccCCCCHH---HHhcCC----ccceEEe----cCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEec
Confidence 357778998875 456555 44 542 234468899999999999976533221 111222333321
Q ss_pred ---------------CCCHHHHHHHHHHHHh
Q 002660 455 ---------------PHDQQSVADALLKLVA 470 (895)
Q Consensus 455 ---------------p~d~~~la~ai~~ll~ 470 (895)
--+.+++++++++++.
T Consensus 413 ~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~ 443 (491)
T PLN02534 413 VEVPVRWGDEERVGVLVKKDEVEKAVKTLMD 443 (491)
T ss_pred ccccccccccccccCccCHHHHHHHHHHHhc
Confidence 1257899999999996
No 286
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=93.13 E-value=0.23 Score=53.57 Aligned_cols=41 Identities=20% Similarity=0.097 Sum_probs=35.1
Q ss_pred HHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEec
Q 002660 799 SQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 842 (895)
Q Consensus 799 g~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMg 842 (895)
...+..+++++|++++++++ +||+.+ | +++=+.+|..++.-
T Consensus 205 p~~~~~a~~~~~~~p~~~l~-IGDs~~-D-i~aA~~aG~~~i~v 245 (286)
T PLN02779 205 PDIYNLAAETLGVDPSRCVV-VEDSVI-G-LQAAKAAGMRCIVT 245 (286)
T ss_pred HHHHHHHHHHhCcChHHEEE-EeCCHH-h-HHHHHHcCCEEEEE
Confidence 55889999999999999999 778777 8 99999999776554
No 287
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=93.07 E-value=2.2 Score=47.09 Aligned_cols=92 Identities=12% Similarity=0.016 Sum_probs=53.2
Q ss_pred CcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCC
Q 002660 313 KPVILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHH 390 (895)
Q Consensus 313 ~~~il~vgrl~--~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~ 390 (895)
+.+.+.-|.-. -.+-++.+++++.++.+. . +.+++...+.. +.+.....+. ..+.+.+
T Consensus 168 ~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~--~--~~~~i~~a~~~-----------~~i~~~~~~~---~~~~~~~-- 227 (347)
T PRK14089 168 GTIAFMPGSRKSEIKRLMPIFKELAKKLEGK--E--KILVVPSFFKG-----------KDLKEIYGDI---SEFEISY-- 227 (347)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHHHhhc--C--cEEEEeCCCcH-----------HHHHHHHhcC---CCcEEec--
Confidence 34444545422 224556778999888632 2 33433322221 2233333322 1233332
Q ss_pred CCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcC
Q 002660 391 KQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK 436 (895)
Q Consensus 391 ~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~ 436 (895)
+..++|+.| |+++.. .|.+.+|++.+|+|.|..-
T Consensus 228 ---~~~~~m~~a----Dlal~~-----SGT~TLE~al~g~P~Vv~Y 261 (347)
T PRK14089 228 ---DTHKALLEA----EFAFIC-----SGTATLEAALIGTPFVLAY 261 (347)
T ss_pred ---cHHHHHHhh----hHHHhc-----CcHHHHHHHHhCCCEEEEE
Confidence 567899999 998877 4777789999999999843
No 288
>PRK06769 hypothetical protein; Validated
Probab=93.06 E-value=0.18 Score=49.85 Aligned_cols=54 Identities=15% Similarity=0.011 Sum_probs=39.9
Q ss_pred CeEEEEEecCCCCc----------chhHHHHHHHHHHHhhccCCCeEEEEEcCCCHH--------HHHHHHHhCCC
Q 002660 612 KHIFVISVDCDSTT----------GLLDATKKICEAVEKERTEGSIGFILSTSMTIS--------EIHSFLVSGHL 669 (895)
Q Consensus 612 ~kli~~DiDGTL~~----------~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~--------~~~~~l~~l~l 669 (895)
-|+|++|.||||.. .+-+.++++|++|+++ |+.++|+|+-+.. .+...++.+++
T Consensus 4 ~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~----G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~ 75 (173)
T PRK06769 4 IQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKAN----HIKIFSFTNQPGIADGIATIADFVQELKGFGF 75 (173)
T ss_pred CcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHC----CCEEEEEECCchhcCCcCCHHHHHHHHHhCCc
Confidence 57999999999921 2347789999999997 5999999986531 23344666666
No 289
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=93.04 E-value=0.13 Score=52.24 Aligned_cols=53 Identities=11% Similarity=0.184 Sum_probs=40.5
Q ss_pred CCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEecCccccccccccccC
Q 002660 794 VLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANR 856 (895)
Q Consensus 794 ~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgNa~~~~~~~~~a~~ 856 (895)
..-.|...++.+. ..|. ++++ +||+.| | ++|++.||.+|||. ..+.+++.+++
T Consensus 129 ~~~~K~~~l~~l~-~~~~---~~v~-vGDs~n-D-l~ml~~Ag~~ia~~---ak~~~~~~~~~ 181 (203)
T TIGR02137 129 QKDPKRQSVIAFK-SLYY---RVIA-AGDSYN-D-TTMLSEAHAGILFH---APENVIREFPQ 181 (203)
T ss_pred CcchHHHHHHHHH-hhCC---CEEE-EeCCHH-H-HHHHHhCCCCEEec---CCHHHHHhCCC
Confidence 3457999999884 5564 5777 788888 8 99999999999997 23556666665
No 290
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=92.78 E-value=0.12 Score=48.87 Aligned_cols=121 Identities=23% Similarity=0.141 Sum_probs=61.5
Q ss_pred CCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCC-CCCcc
Q 002660 27 DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFG-PKDKY 105 (895)
Q Consensus 27 ~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~-~~~~~ 105 (895)
.++|...-...|+++|+++| |+|.+.|.... ....+ ..|+.++.++.. +....
T Consensus 7 Gt~Ghv~P~lala~~L~~rG--h~V~~~~~~~~--------~~~v~----------------~~Gl~~~~~~~~~~~~~~ 60 (139)
T PF03033_consen 7 GTRGHVYPFLALARALRRRG--HEVRLATPPDF--------RERVE----------------AAGLEFVPIPGDSRLPRS 60 (139)
T ss_dssp SSHHHHHHHHHHHHHHHHTT---EEEEEETGGG--------HHHHH----------------HTT-EEEESSSCGGGGHH
T ss_pred CChhHHHHHHHHHHHHhccC--CeEEEeecccc--------eeccc----------------ccCceEEEecCCcCcCcc
Confidence 47799999999999999999 99999887421 11111 238888888765 21110
Q ss_pred c-ccccCCCChHH--HHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhccCCCCEEEEeCCC
Q 002660 106 I-AKELLWPHIPE--FVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSL 177 (895)
Q Consensus 106 ~-~~~~~~~~l~~--f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~ 177 (895)
. ....+...... ....+...+........ +.......+|++.++. ....+..++.++++|.+.+....
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~~--~~~~~~~vaE~~~iP~~~~~~~p 131 (139)
T PF03033_consen 61 LEPLANLRRLARLIRGLEEAMRILARFRPDLV--VAAGGYVADDVIIAAP--LAFAAALVAEQLGIPGVANRLFP 131 (139)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCC--CHCTTTTECCEECHHH--HHTHHHHHHHHHTS-EEEEESSG
T ss_pred cchhhhhhhHHHHhhhhhHHHHHhhccCcchh--hhccCcccchHHHhhh--hcCccceeEhhhCchHHHHhhCC
Confidence 0 11111111100 11111111211111100 0111123466655443 34566778899999999877654
No 291
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=92.76 E-value=0.17 Score=53.76 Aligned_cols=34 Identities=6% Similarity=0.094 Sum_probs=21.0
Q ss_pred CeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEc
Q 002660 646 SIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 680 (895)
Q Consensus 646 g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 680 (895)
|+.++|+|+.+...+...++.+++. ..+|.++++
T Consensus 125 g~~l~I~Tn~~~~~~~~~l~~~gl~-~~Fd~ii~~ 158 (260)
T PLN03243 125 EIPIAVASTRPRRYLERAIEAVGME-GFFSVVLAA 158 (260)
T ss_pred CCEEEEEeCcCHHHHHHHHHHcCCH-hhCcEEEec
Confidence 4677777777777676677766663 234555543
No 292
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=92.40 E-value=0.34 Score=49.00 Aligned_cols=34 Identities=0% Similarity=-0.023 Sum_probs=27.5
Q ss_pred HHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 632 KKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 632 ~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
.++|+.|+++ |+.++|+||.....+..+++.+|+
T Consensus 86 ~e~l~~l~~~----g~~~~IvS~~~~~~~~~~l~~~g~ 119 (201)
T TIGR01491 86 EELVRWLKEK----GLKTAIVSGGIMCLAKKVAEKLNP 119 (201)
T ss_pred HHHHHHHHHC----CCEEEEEeCCcHHHHHHHHHHhCC
Confidence 3345556665 699999999999999999999987
No 293
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=92.17 E-value=0.29 Score=50.50 Aligned_cols=38 Identities=16% Similarity=0.166 Sum_probs=29.3
Q ss_pred CChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEE
Q 002660 796 ASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVI 840 (895)
Q Consensus 796 ~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVa 840 (895)
..|..+++ +++.+.+++++ +||+.+ | +.|.+.||..+|
T Consensus 147 ~~K~~~l~----~~~~~~~~~i~-iGDs~~-D-i~aa~~Ag~~~a 184 (219)
T PRK09552 147 CCKPSLIR----KLSDTNDFHIV-IGDSIT-D-LEAAKQADKVFA 184 (219)
T ss_pred CchHHHHH----HhccCCCCEEE-EeCCHH-H-HHHHHHCCccee
Confidence 34776654 45777788888 788887 8 999999998666
No 294
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=92.10 E-value=0.24 Score=54.35 Aligned_cols=53 Identities=8% Similarity=0.074 Sum_probs=40.8
Q ss_pred EEEEEecCCC--CcchhHHHHHHHHHHHhh----ccCCCeEEEEE---cCCCHHHHHHHH-HhCCCC
Q 002660 614 IFVISVDCDS--TTGLLDATKKICEAVEKE----RTEGSIGFILS---TSMTISEIHSFL-VSGHLS 670 (895)
Q Consensus 614 li~~DiDGTL--~~~~~~~~~~~l~~l~~~----g~~~g~~v~ia---TGR~~~~~~~~l-~~l~l~ 670 (895)
.++||+|||| .....+...++++.|+.+ | +.+++. +|++.....+.+ +.+|++
T Consensus 2 ~~ifD~DGvL~~g~~~i~ga~eal~~L~~~~~~~g----~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 2 GFAFDIDGVLFRGKKPIAGASDALRRLNRNQGQLK----IPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred EEEEeCcCceECCccccHHHHHHHHHHhccccccC----CCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 4789999999 466788899999999885 4 444444 588888866665 888885
No 295
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=92.06 E-value=0.47 Score=49.65 Aligned_cols=55 Identities=15% Similarity=0.112 Sum_probs=41.2
Q ss_pred CeEEEEEecCCCC------------------------------cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHH---
Q 002660 612 KHIFVISVDCDST------------------------------TGLLDATKKICEAVEKERTEGSIGFILSTSMTIS--- 658 (895)
Q Consensus 612 ~kli~~DiDGTL~------------------------------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~--- 658 (895)
+-+++||||+|+. ....+.+.++.+.++++ |+.|++.|||+-.
T Consensus 101 ~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~----G~kIf~VSgR~e~~r~ 176 (275)
T TIGR01680 101 KDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSL----GFKIIFLSGRLKDKQA 176 (275)
T ss_pred CCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHC----CCEEEEEeCCchhHHH
Confidence 4689999999981 01245677888888887 5999999999843
Q ss_pred HHHHHHHhCCCC
Q 002660 659 EIHSFLVSGHLS 670 (895)
Q Consensus 659 ~~~~~l~~l~l~ 670 (895)
.....|...|++
T Consensus 177 aT~~NL~kaGy~ 188 (275)
T TIGR01680 177 VTEANLKKAGYH 188 (275)
T ss_pred HHHHHHHHcCCC
Confidence 345677888883
No 296
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=92.03 E-value=0.43 Score=56.10 Aligned_cols=87 Identities=16% Similarity=0.171 Sum_probs=54.9
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCC----chhccccCCCeEEeCCC-
Q 002660 382 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHRVLDNGLLVDPH- 456 (895)
Q Consensus 382 ~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg----~~eiv~~~~~g~lv~p~- 456 (895)
.++.+..++|+. ++++.. +.++|| + -|--.++.||+.+|+|+|+-..-| ....++..+.|+.++..
T Consensus 323 ~n~~~~~W~PQ~---~lL~hp--~v~~fi-t---HgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~ 393 (500)
T PF00201_consen 323 KNVLIVKWLPQN---DLLAHP--RVKLFI-T---HGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKND 393 (500)
T ss_dssp TTEEEESS--HH---HHHTST--TEEEEE-E---S--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC
T ss_pred ceEEEeccccch---hhhhcc--cceeee-e---ccccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecC
Confidence 578888999875 456544 113444 2 244578999999999999976533 23344455678877654
Q ss_pred -CHHHHHHHHHHHHhCHHHHHH
Q 002660 457 -DQQSVADALLKLVADKQLWAR 477 (895)
Q Consensus 457 -d~~~la~ai~~ll~~~~~~~~ 477 (895)
+.+++.++|.++++|++-.+.
T Consensus 394 ~~~~~l~~ai~~vl~~~~y~~~ 415 (500)
T PF00201_consen 394 LTEEELRAAIREVLENPSYKEN 415 (500)
T ss_dssp -SHHHHHHHHHHHHHSHHHHHH
T ss_pred CcHHHHHHHHHHHHhhhHHHHH
Confidence 468899999999999864433
No 297
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=92.00 E-value=1.4 Score=49.35 Aligned_cols=110 Identities=11% Similarity=0.167 Sum_probs=63.2
Q ss_pred CCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEc--CC-------CCchhccccCCC
Q 002660 379 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVAT--KN-------GGPVDIHRVLDN 449 (895)
Q Consensus 379 ~l~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas--~~-------gg~~eiv~~~~~ 449 (895)
...++|.+... ..++.+++..| |++|- -++-++.|++.+++|||-- +. |...++ .+...
T Consensus 249 ~~~~~i~~~~~--~~~~~~ll~~a----DiLIT-----DySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~-~~~~p 316 (369)
T PF04464_consen 249 EDNSNIIFVSD--NEDIYDLLAAA----DILIT-----DYSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDY-EEDLP 316 (369)
T ss_dssp T-TTTEEE-TT---S-HHHHHHT-----SEEEE-----SS-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-T-TTSSS
T ss_pred ccCCcEEECCC--CCCHHHHHHhc----CEEEE-----echhHHHHHHHhCCCEEEEeccHHHHhhccCCCCch-HhhCC
Confidence 34467777655 45899999999 99762 3677999999999999953 22 222232 22234
Q ss_pred eEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Q 002660 450 GLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRI 502 (895)
Q Consensus 450 g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~ 502 (895)
|-.+. +.+++.++|..++++++..++..+...+..-.|.=.+.++++.+.+
T Consensus 317 g~~~~--~~~eL~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Dg~s~eri~~~I 367 (369)
T PF04464_consen 317 GPIVY--NFEELIEAIENIIENPDEYKEKREKFRDKFFKYNDGNSSERIVNYI 367 (369)
T ss_dssp S-EES--SHHHHHHHHTTHHHHHHHTHHHHHHHHHHHSTT--S-HHHHHHHHH
T ss_pred CceeC--CHHHHHHHHHhhhhCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHH
Confidence 55664 8899999999998877655444444444442344445566665544
No 298
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=91.94 E-value=0.13 Score=50.08 Aligned_cols=53 Identities=13% Similarity=0.113 Sum_probs=36.0
Q ss_pred eEEEEEecCCC--C-------------cchhHHHHHHHHHHHhhccCCCeEEEEEc-----CC--CH-------HHHHHH
Q 002660 613 HIFVISVDCDS--T-------------TGLLDATKKICEAVEKERTEGSIGFILST-----SM--TI-------SEIHSF 663 (895)
Q Consensus 613 kli~~DiDGTL--~-------------~~~~~~~~~~l~~l~~~g~~~g~~v~iaT-----GR--~~-------~~~~~~ 663 (895)
|+++||+|||| + .-..+.+.++|+++.++ |..+||+| |+ .. .-+..+
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~~----Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~i 76 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHKK----GYKIVIVTNQSGIGRGMGEKDLENFHEKIENI 76 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHHT----TEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHH
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHhc----CCeEEEEeCccccccccccchHHHHHHHHHHH
Confidence 68999999999 1 01234688889999887 59999988 66 11 223456
Q ss_pred HHhCCC
Q 002660 664 LVSGHL 669 (895)
Q Consensus 664 l~~l~l 669 (895)
++.+++
T Consensus 77 l~~l~i 82 (159)
T PF08645_consen 77 LKELGI 82 (159)
T ss_dssp HHHCTS
T ss_pred HHHcCC
Confidence 777777
No 299
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=91.75 E-value=0.088 Score=52.14 Aligned_cols=42 Identities=26% Similarity=0.314 Sum_probs=36.2
Q ss_pred eecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCc
Q 002660 791 VIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGV 835 (895)
Q Consensus 791 I~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~a 835 (895)
..+.+.+|+.+++.+++.+|++++++++ +||+.+ | ++|++.|
T Consensus 136 ~~~~~~~K~~~l~~~~~~~~~~~~~~~~-iGDs~~-D-~~~~~~a 177 (177)
T TIGR01488 136 VNPEGECKGKVLKELLEESKITLKKIIA-VGDSVN-D-LPMLKLA 177 (177)
T ss_pred ccCCcchHHHHHHHHHHHhCCCHHHEEE-EeCCHH-H-HHHHhcC
Confidence 3567889999999999999999999988 777777 8 9999864
No 300
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=91.58 E-value=26 Score=38.94 Aligned_cols=104 Identities=12% Similarity=0.085 Sum_probs=61.7
Q ss_pred CCcEEEEEeCCCCCCCHH--HHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCC
Q 002660 312 RKPVILALARPDPKKNIT--TLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKH 389 (895)
Q Consensus 312 ~~~~il~vgrl~~~Kgi~--~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~ 389 (895)
++.+++..|.-.+.|... ...+.++.+.+ ....+ +++|+..+.+ .+...++ .+.......+.+.|.
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~--~~~~v-vl~ggp~e~e------~~~~~~i---~~~~~~~~~~~l~g~ 250 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQA--RGYEV-VLTSGPDKDD------LACVNEI---AQGCQTPPVTALAGK 250 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHH--CCCeE-EEEcCCChHH------HHHHHHH---HHhcCCCccccccCC
Confidence 355667777766677654 55666666632 23344 3444432110 1111222 222222334667888
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcC
Q 002660 390 HKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK 436 (895)
Q Consensus 390 ~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~ 436 (895)
.+-.++.++++.| +++|-. |+ -.+-=|.|.|+|+|+-.
T Consensus 251 ~sL~el~ali~~a----~l~v~n---DS--Gp~HlAaA~g~P~v~lf 288 (352)
T PRK10422 251 TTFPELGALIDHA----QLFIGV---DS--APAHIAAAVNTPLICLF 288 (352)
T ss_pred CCHHHHHHHHHhC----CEEEec---CC--HHHHHHHHcCCCEEEEE
Confidence 8889999999999 999865 33 34455778899999854
No 301
>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E.coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.
Probab=91.56 E-value=12 Score=39.12 Aligned_cols=145 Identities=14% Similarity=0.086 Sum_probs=77.3
Q ss_pred CCcEE---EEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCC-CccccccchHHHHHHHHHH-----------HH
Q 002660 312 RKPVI---LALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRD-GIDEMSSTSASVLLSVLKL-----------ID 376 (895)
Q Consensus 312 ~~~~i---l~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~-~~~~~~~~~~~~~~~l~~~-----------~~ 376 (895)
.++.. +|+||..-.||+..+++.-+... .+ +++.-++-+-+ ... .-.+... +.
T Consensus 179 se~nmnv~~yigR~Tt~kG~~~mfD~h~~~l--K~-~~~~t~~~GierS~A---------~~~i~d~~~~~~y~~~~~~~ 246 (355)
T PF11440_consen 179 SEKNMNVNRYIGRQTTWKGPRRMFDLHEKIL--KP-AGFKTIMEGIERSPA---------KISIKDHGIPYEYYPKLDCD 246 (355)
T ss_dssp GGSEEEEEEEE--SSGGG-HHHHHHHHHHTT--TT-TT-EEEEE---SSTH---------HHHHHHTT--EEEE-CTGGG
T ss_pred HhhhcccceeeeeeeeecCcHHHhhhHHHhc--CC-cchhHHhhhhhcCCc---------eeeeecCCcccccCcccccc
Confidence 34444 89999999999999999998874 33 56654443221 110 0111111 11
Q ss_pred hcCCC--CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC------CCCCchHHHHHHHcCC-CEEEcCCCCch------
Q 002660 377 KYDLY--GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF------IEPFGLTLIEAAAHGL-PIVATKNGGPV------ 441 (895)
Q Consensus 377 ~~~l~--~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~------~Eg~gl~~~Ea~a~G~-PVvas~~gg~~------ 441 (895)
...+. ..+.++|..=.+|..+.++.+ .+.+.-+. .+.|-.+-+|..|||. ||.-...|...
T Consensus 247 ~~~~~pN~~~~v~~~Yi~~E~~~~Maks----~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~ 322 (355)
T PF11440_consen 247 EPKPAPNSPVPVYGPYIRSEGLERMAKS----LFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDG 322 (355)
T ss_dssp G---SSS--EEEESS--HHHHHHHHHTE----EEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTS
T ss_pred CcccCCCCcceecchhhhHHHHHHHhhc----cceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecC
Confidence 11222 236677776678888888887 44443332 3457889999999997 55544443322
Q ss_pred -hccccCCCeEEeCCCCHHHHHHHHHHHHhCH
Q 002660 442 -DIHRVLDNGLLVDPHDQQSVADALLKLVADK 472 (895)
Q Consensus 442 -eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~ 472 (895)
-++......+.++-.|.++-.+.|.++..+.
T Consensus 323 ~~~~~~~~~~I~~De~dle~T~ekl~E~a~~~ 354 (355)
T PF11440_consen 323 TRYIDHPYSAIYFDENDLESTVEKLIEVANNR 354 (355)
T ss_dssp SBGGSS--S-EEE-TTSHHHHHHHHHHHHT-H
T ss_pred ceeeccCcceeEeccchHHHHHHHHHHHhccC
Confidence 2333445678889999999999888876553
No 302
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=90.94 E-value=0.83 Score=47.69 Aligned_cols=67 Identities=18% Similarity=0.198 Sum_probs=49.7
Q ss_pred ccCeEEEEEecCCC-Cc-----chhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcC
Q 002660 610 RRKHIFVISVDCDS-TT-----GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNS 681 (895)
Q Consensus 610 ~~~kli~~DiDGTL-~~-----~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~n 681 (895)
....+|+||+|-|| +. -..+.+.+.+..|++.| -+.+..++|- ..-+..-++++++. ..+|.+||.+
T Consensus 120 ~~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~Lk~~g---~vLvLWSyG~-~eHV~~sl~~~~L~-~~Fd~ii~~G 192 (297)
T PF05152_consen 120 EPPHVIVFDLDSTLITDEGDVRIRDPAVYDSLRELKEQG---CVLVLWSYGN-REHVRHSLKELKLE-GYFDIIICGG 192 (297)
T ss_pred CCCcEEEEECCCcccccCCccccCChHHHHHHHHHHHcC---CEEEEecCCC-HHHHHHHHHHhCCc-cccEEEEeCC
Confidence 35569999999999 21 13477889999999984 4666666675 45667788888886 5678888854
No 303
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=90.49 E-value=30 Score=37.79 Aligned_cols=110 Identities=16% Similarity=0.278 Sum_probs=82.4
Q ss_pred HHHHHHHHhcCC--CCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhcccc
Q 002660 369 LSVLKLIDKYDL--YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV 446 (895)
Q Consensus 369 ~~l~~~~~~~~l--~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~ 446 (895)
......+..+++ .++..|.|.+ +++.++..-. |++|.--+--+.|..-+|++--|=|.|-.. .++.
T Consensus 238 ~~F~~f~~~ldlvr~gkasfegR~---~~p~fla~~t---D~VvSHqWeN~lNYlY~daLyggYPLVHNS-----~~l~- 305 (364)
T PF10933_consen 238 PTFVNFANSLDLVRDGKASFEGRF---DFPDFLAQHT---DAVVSHQWENPLNYLYYDALYGGYPLVHNS-----PLLK- 305 (364)
T ss_pred HHHHHHHHhhHHhhcCeeEEeeec---ChHHHHHhCC---CEEEeccccchhhHHHHHHHhcCCCcccCc-----chhc-
Confidence 344455566665 4567788874 6677777653 998877777789999999999999999642 2232
Q ss_pred CCCeEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHhhcCCH
Q 002660 447 LDNGLLVDPHDQQSVADALLKLVA-DKQLWARCRQNGLKNIHLFSW 491 (895)
Q Consensus 447 ~~~g~lv~p~d~~~la~ai~~ll~-~~~~~~~~~~~~~~~~~~~s~ 491 (895)
+.|+..+..|..+=+++|.+++. ....++..++.+++.+.+++.
T Consensus 306 -d~GYYY~~fD~~~G~r~L~~A~~~HD~~~~~Y~~ra~~~l~~~~p 350 (364)
T PF10933_consen 306 -DVGYYYPDFDAFEGARQLLRAIREHDADLDAYRARARRLLDRLSP 350 (364)
T ss_pred -ccCcCCCCccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhhCC
Confidence 36999999999999999999987 556688888888888865444
No 304
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=90.49 E-value=2.1 Score=43.91 Aligned_cols=43 Identities=19% Similarity=0.169 Sum_probs=33.9
Q ss_pred hHHHHHHHHHHhCCCcccEEEEecCCC-CCCccccccCcceE-EEecC
Q 002660 798 RSQALRYLYLRWGVELSKMVVFVGESG-DTDYEGLLGGVHKT-VILKG 843 (895)
Q Consensus 798 Kg~al~~L~~~~gi~~~~viaf~Gd~n-n~D~~eMl~~ag~g-VaMgN 843 (895)
+....+.+++++|+++++++. +||+. + | +.+=+.+|.. |.+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~-igDs~~~-d-i~~A~~aG~~~i~~~~ 196 (221)
T TIGR02253 152 HPKIFYAALKRLGVKPEEAVM-VGDRLDK-D-IKGAKNLGMKTVWINQ 196 (221)
T ss_pred CHHHHHHHHHHcCCChhhEEE-ECCChHH-H-HHHHHHCCCEEEEECC
Confidence 456789999999999999988 77775 5 6 9999999964 44443
No 305
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=90.48 E-value=0.39 Score=47.41 Aligned_cols=36 Identities=3% Similarity=-0.009 Sum_probs=29.6
Q ss_pred HHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 630 ATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 630 ~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
.+.+.++.++++ |+.++|+||.....+.++++.+++
T Consensus 77 g~~~~l~~l~~~----g~~~~ivS~~~~~~i~~~~~~~g~ 112 (177)
T TIGR01488 77 GARELISWLKER----GIDTVIVSGGFDFFVEPVAEKLGI 112 (177)
T ss_pred CHHHHHHHHHHC----CCEEEEECCCcHHHHHHHHHHcCC
Confidence 455666666666 699999999999999999999988
No 306
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=90.47 E-value=2.9 Score=43.95 Aligned_cols=41 Identities=10% Similarity=-0.085 Sum_probs=34.3
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEE
Q 002660 797 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVI 840 (895)
Q Consensus 797 sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVa 840 (895)
-+...+.+.++++|+++++++. +||+.. | +..=+.+|+-++
T Consensus 165 P~p~~~~~a~~~~~~~~~~~l~-vgDs~~-D-i~aA~~aGi~~i 205 (248)
T PLN02770 165 PHPDPYLKALEVLKVSKDHTFV-FEDSVS-G-IKAGVAAGMPVV 205 (248)
T ss_pred CChHHHHHHHHHhCCChhHEEE-EcCCHH-H-HHHHHHCCCEEE
Confidence 4457789999999999999999 888777 8 998889997654
No 307
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=90.43 E-value=0.35 Score=49.94 Aligned_cols=37 Identities=14% Similarity=0.127 Sum_probs=28.2
Q ss_pred HHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCC
Q 002660 630 ATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 670 (895)
Q Consensus 630 ~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~ 670 (895)
.+.++++.|+++ |+.++++|+.+...+...++.+|+.
T Consensus 90 Gv~~~l~~L~~~----~i~~avaS~s~~~~~~~~L~~~gl~ 126 (221)
T COG0637 90 GVVELLEQLKAR----GIPLAVASSSPRRAAERVLARLGLL 126 (221)
T ss_pred cHHHHHHHHHhc----CCcEEEecCChHHHHHHHHHHccCh
Confidence 345666777776 4888888888888888888888874
No 308
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=90.30 E-value=0.37 Score=48.32 Aligned_cols=38 Identities=5% Similarity=0.077 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCC
Q 002660 629 DATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 670 (895)
Q Consensus 629 ~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~ 670 (895)
+.+.+.++.++++ |+.++|+||-+...+..+++.++++
T Consensus 92 ~~~~e~i~~~~~~----~~~v~IvS~~~~~~i~~~~~~~~i~ 129 (192)
T PF12710_consen 92 PDAMELIRELKDN----GIKVVIVSGSPDEIIEPIAERLGID 129 (192)
T ss_dssp TTHHHHHHHHHHT----TSEEEEEEEEEHHHHHHHHHHTTSS
T ss_pred hhHHHHHHHHHHC----CCEEEEECCCcHHHHHHHHHHcCCC
Confidence 4566888888887 5999999999999999999999983
No 309
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=90.08 E-value=0.48 Score=48.19 Aligned_cols=37 Identities=0% Similarity=0.016 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCC
Q 002660 629 DATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 670 (895)
Q Consensus 629 ~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~ 670 (895)
+...++++.++++ + .++|+||-....+.++++.+|++
T Consensus 71 pga~ell~~lk~~----~-~~~IVS~~~~~~~~~il~~lgi~ 107 (203)
T TIGR02137 71 EGAVEFVDWLRER----F-QVVILSDTFYEFSQPLMRQLGFP 107 (203)
T ss_pred ccHHHHHHHHHhC----C-eEEEEeCChHHHHHHHHHHcCCc
Confidence 3455667777764 3 89999999999999999999983
No 310
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=89.69 E-value=0.42 Score=46.71 Aligned_cols=54 Identities=11% Similarity=0.172 Sum_probs=36.2
Q ss_pred CeEEEEEecCCC------C-----------c-----------chhHHHHHHHHHHHhhccCCCeEEEEEcCC-CHHHHHH
Q 002660 612 KHIFVISVDCDS------T-----------T-----------GLLDATKKICEAVEKERTEGSIGFILSTSM-TISEIHS 662 (895)
Q Consensus 612 ~kli~~DiDGTL------~-----------~-----------~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR-~~~~~~~ 662 (895)
.|||+||+|.|| + . ..-+.+..+|+.|+++ |+.+++||=- .+.-+++
T Consensus 3 PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~----gv~lavASRt~~P~~A~~ 78 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKER----GVKLAVASRTDEPDWARE 78 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHC----T--EEEEE--S-HHHHHH
T ss_pred CcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHC----CCEEEEEECCCChHHHHH
Confidence 479999999999 1 0 1235678899999997 6999999954 4567889
Q ss_pred HHHhCCC
Q 002660 663 FLVSGHL 669 (895)
Q Consensus 663 ~l~~l~l 669 (895)
.|+.+++
T Consensus 79 ~L~~l~i 85 (169)
T PF12689_consen 79 LLKLLEI 85 (169)
T ss_dssp HHHHTT-
T ss_pred HHHhcCC
Confidence 9999887
No 311
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=89.67 E-value=2.9 Score=42.09 Aligned_cols=41 Identities=15% Similarity=0.036 Sum_probs=33.7
Q ss_pred hHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEe
Q 002660 798 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 798 Kg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaM 841 (895)
+....+.+++++|+++++++. +||+.. | +..=+.+|...+.
T Consensus 150 ~~~~~~~~~~~~~~~p~~~~~-vgD~~~-D-i~~A~~~G~~~i~ 190 (198)
T TIGR01428 150 APQVYQLALEALGVPPDEVLF-VASNPW-D-LGGAKKFGFKTAW 190 (198)
T ss_pred CHHHHHHHHHHhCCChhhEEE-EeCCHH-H-HHHHHHCCCcEEE
Confidence 366789999999999999988 777766 7 9988888876554
No 312
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=89.28 E-value=0.78 Score=46.59 Aligned_cols=40 Identities=20% Similarity=0.372 Sum_probs=28.0
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEecC
Q 002660 797 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKG 843 (895)
Q Consensus 797 sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgN 843 (895)
.|..+++.+ +...+++++ +||+.+ | ++|.+.+|.||+.+.
T Consensus 132 ~k~~~l~~~----~~~~~~~v~-iGDs~~-D-~~~~~aa~~~v~~~~ 171 (205)
T PRK13582 132 GKRQAVKAL----KSLGYRVIA-AGDSYN-D-TTMLGEADAGILFRP 171 (205)
T ss_pred hHHHHHHHH----HHhCCeEEE-EeCCHH-H-HHHHHhCCCCEEECC
Confidence 355555543 333467777 777777 8 999999999998653
No 313
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=88.98 E-value=0.26 Score=51.14 Aligned_cols=55 Identities=9% Similarity=0.091 Sum_probs=41.4
Q ss_pred cCeEEEEEecCCCC-----------------------------cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHH---
Q 002660 611 RKHIFVISVDCDST-----------------------------TGLLDATKKICEAVEKERTEGSIGFILSTSMTIS--- 658 (895)
Q Consensus 611 ~~kli~~DiDGTL~-----------------------------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~--- 658 (895)
.+..|+||||+|+. ....+.+.++++.++++ |+.|+++|||+-.
T Consensus 71 ~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~----G~~V~~iT~R~~~~r~ 146 (229)
T PF03767_consen 71 KPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSR----GVKVFFITGRPESQRE 146 (229)
T ss_dssp SEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHT----TEEEEEEEEEETTCHH
T ss_pred CCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHC----CCeEEEEecCCchhHH
Confidence 46689999999981 12334577999999998 5999999999754
Q ss_pred HHHHHHHhCCC
Q 002660 659 EIHSFLVSGHL 669 (895)
Q Consensus 659 ~~~~~l~~l~l 669 (895)
.....|...|+
T Consensus 147 ~T~~nL~~~G~ 157 (229)
T PF03767_consen 147 ATEKNLKKAGF 157 (229)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHcCC
Confidence 44556777777
No 314
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=88.93 E-value=1.5 Score=48.81 Aligned_cols=55 Identities=9% Similarity=0.153 Sum_probs=45.8
Q ss_pred cccCeEEEEEecCCCC-------------------cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhC
Q 002660 609 RRRKHIFVISVDCDST-------------------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSG 667 (895)
Q Consensus 609 ~~~~kli~~DiDGTL~-------------------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l 667 (895)
...+|.+++|+|+||- +..-...++.+..|+++ |+.++|||=.....+.+.+...
T Consensus 219 g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~kq----GVlLav~SKN~~~da~evF~kh 292 (574)
T COG3882 219 GKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKKQ----GVLLAVCSKNTEKDAKEVFRKH 292 (574)
T ss_pred CcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHhc----cEEEEEecCCchhhHHHHHhhC
Confidence 5678999999999991 23456788889999998 5999999999999998887764
No 315
>PLN02940 riboflavin kinase
Probab=88.92 E-value=0.73 Score=51.85 Aligned_cols=45 Identities=7% Similarity=0.222 Sum_probs=32.9
Q ss_pred HHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHH-hCCCCCCCCCEEEEcC
Q 002660 632 KKICEAVEKERTEGSIGFILSTSMTISEIHSFLV-SGHLSPSDFDAFICNS 681 (895)
Q Consensus 632 ~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~-~l~l~~~~~d~~I~~n 681 (895)
.++|+.|+++ |+.++|+|+.+...+...++ ..++. ..+|.++|+.
T Consensus 99 ~elL~~Lk~~----g~~l~IvTn~~~~~~~~~l~~~~gl~-~~Fd~ii~~d 144 (382)
T PLN02940 99 NRLIKHLKSH----GVPMALASNSPRANIEAKISCHQGWK-ESFSVIVGGD 144 (382)
T ss_pred HHHHHHHHHC----CCcEEEEeCCcHHHHHHHHHhccChH-hhCCEEEehh
Confidence 3466667666 69999999999988888876 56764 3467777753
No 316
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=88.63 E-value=1.3 Score=43.23 Aligned_cols=60 Identities=7% Similarity=0.063 Sum_probs=46.2
Q ss_pred cccCeEEEEEecCCCC----cchhHHHHHHHHHHHhhccCCCeEEEEEcCC-------CHHHHHHHHHhCCCC
Q 002660 609 RRRKHIFVISVDCDST----TGLLDATKKICEAVEKERTEGSIGFILSTSM-------TISEIHSFLVSGHLS 670 (895)
Q Consensus 609 ~~~~kli~~DiDGTL~----~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR-------~~~~~~~~l~~l~l~ 670 (895)
..-.|.|+||.|.||+ ..+++...+.++++++.+ +.-.|+|+|=- ....+..+-+.+|++
T Consensus 38 ~~Gik~li~DkDNTL~~~~~~~i~~~~~~~~~~l~~~~--~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp 108 (168)
T PF09419_consen 38 KKGIKALIFDKDNTLTPPYEDEIPPEYAEWLNELKKQF--GKDRVLIVSNSAGSSDDPDGERAEALEKALGIP 108 (168)
T ss_pred hcCceEEEEcCCCCCCCCCcCcCCHHHHHHHHHHHHHC--CCCeEEEEECCCCcccCccHHHHHHHHHhhCCc
Confidence 4457899999999994 678899999999999985 22256666654 367777788888883
No 317
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=88.20 E-value=0.86 Score=44.25 Aligned_cols=52 Identities=15% Similarity=0.129 Sum_probs=39.0
Q ss_pred eEEEEEecCCCC----cc------------------hhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 613 HIFVISVDCDST----TG------------------LLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 613 kli~~DiDGTL~----~~------------------~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
|+|++|+||||. .. .-+.+.+.|+.+.+. ..++|.|..+..-+.++++.+.-
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~~-----~ev~i~T~~~~~ya~~v~~~ldp 74 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSKH-----YEVVIWTSASEEYAEPVLDALDP 74 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHHH-----CEEEEE-SS-HHHHHHHHHHHTT
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHHh-----ceEEEEEeehhhhhhHHHHhhhh
Confidence 689999999991 11 346788999998765 88999999999999999888763
No 318
>PTZ00445 p36-lilke protein; Provisional
Probab=87.59 E-value=1.1 Score=44.97 Aligned_cols=44 Identities=9% Similarity=0.088 Sum_probs=35.1
Q ss_pred ecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceE
Q 002660 792 IPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKT 838 (895)
Q Consensus 792 ~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~g 838 (895)
.|....|..=++++++++|+++++++. +||... . ++--+..|+-
T Consensus 157 KPdp~iK~yHle~ll~~~gl~peE~LF-IDD~~~-N-VeaA~~lGi~ 200 (219)
T PTZ00445 157 APMPLDKSYHLKQVCSDFNVNPDEILF-IDDDMN-N-CKNALKEGYI 200 (219)
T ss_pred CCCccchHHHHHHHHHHcCCCHHHeEe-ecCCHH-H-HHHHHHCCCE
Confidence 455567888899999999999999977 888654 4 8888877753
No 319
>PLN02207 UDP-glycosyltransferase
Probab=87.39 E-value=11 Score=43.72 Aligned_cols=168 Identities=12% Similarity=0.123 Sum_probs=88.0
Q ss_pred CCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCC--ccccccchHHHHHHHHHHHHhcCCCCcEEeC
Q 002660 312 RKPVILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDG--IDEMSSTSASVLLSVLKLIDKYDLYGQVAYP 387 (895)
Q Consensus 312 ~~~~il~vgrl~--~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~--~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~ 387 (895)
+..+.++.|... ..+-+..+..+++.+. . .+..++.+... .+.+. + ...++. .++..+.
T Consensus 275 ~sVVyvSfGS~~~~~~~q~~ela~~l~~~~----~-~flW~~r~~~~~~~~~lp-------~---~f~er~--~~~g~i~ 337 (468)
T PLN02207 275 ASVVFLCFGSMGRLRGPLVKEIAHGLELCQ----Y-RFLWSLRTEEVTNDDLLP-------E---GFLDRV--SGRGMIC 337 (468)
T ss_pred CcEEEEEeccCcCCCHHHHHHHHHHHHHCC----C-cEEEEEeCCCccccccCC-------H---HHHhhc--CCCeEEE
Confidence 456777888754 2334666677777653 1 34345543211 00111 1 111122 2455666
Q ss_pred CCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCc----hhc-cccCCCeEEeC--------
Q 002660 388 KHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP----VDI-HRVLDNGLLVD-------- 454 (895)
Q Consensus 388 g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~----~ei-v~~~~~g~lv~-------- 454 (895)
++.|+.++ ++..+ .+.||.= -|+ ++.+||+.+|+|+|+-...+- ..+ +...+.|+-+.
T Consensus 338 ~W~PQ~~I---L~H~~--vg~FvTH---~Gw-nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~ 408 (468)
T PLN02207 338 GWSPQVEI---LAHKA--VGGFVSH---CGW-NSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSD 408 (468)
T ss_pred EeCCHHHH---hcccc--cceeeec---Ccc-ccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccC
Confidence 89888764 44431 1345522 233 477999999999999765432 222 22234565331
Q ss_pred -CCCHHHHHHHHHHHHh--CHHH---HHHHHHHHHHHh-hcCCHHHHHHHHHHHHHcc
Q 002660 455 -PHDQQSVADALLKLVA--DKQL---WARCRQNGLKNI-HLFSWPEHCKTYLSRIAGC 505 (895)
Q Consensus 455 -p~d~~~la~ai~~ll~--~~~~---~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~~~ 505 (895)
.-+.+++.++|++++. +++. .+++++.+++.+ +-=|.....+++++.+..+
T Consensus 409 ~~v~~e~i~~av~~vm~~~~~~~r~~a~~l~~~a~~A~~~GGSS~~~l~~~v~~~~~~ 466 (468)
T PLN02207 409 EIVNANEIETAIRCVMNKDNNVVRKRVMDISQMIQRATKNGGSSFAAIEKFIHDVIGI 466 (468)
T ss_pred CcccHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Confidence 1267899999999996 2222 223344444444 2223444455666655543
No 320
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=85.33 E-value=13 Score=43.11 Aligned_cols=182 Identities=13% Similarity=0.118 Sum_probs=121.0
Q ss_pred hhhcCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCC-c
Q 002660 305 MRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYG-Q 383 (895)
Q Consensus 305 ~~~~~~~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~-~ 383 (895)
...+.+.+..++.....+. |=-+..++.+..+.+ .-|+-+|++=.-|--. ..++...+...|+.+ +
T Consensus 751 ~~y~Lp~d~vvf~~FNqLy--KidP~~l~~W~~ILk--~VPnS~LwllrfPa~g---------e~rf~ty~~~~Gl~p~r 817 (966)
T KOG4626|consen 751 SQYGLPEDAVVFCNFNQLY--KIDPSTLQMWANILK--RVPNSVLWLLRFPAVG---------EQRFRTYAEQLGLEPDR 817 (966)
T ss_pred CCCCCCCCeEEEeechhhh--cCCHHHHHHHHHHHH--hCCcceeEEEeccccc---------hHHHHHHHHHhCCCccc
Confidence 3455566666666666653 333456666665543 3344333331111111 156778889999976 5
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcC-------CCCchhccccCCCeEEeCCC
Q 002660 384 VAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK-------NGGPVDIHRVLDNGLLVDPH 456 (895)
Q Consensus 384 v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~-------~gg~~eiv~~~~~g~lv~p~ 456 (895)
|.|..-...+|-..-++.| ||.+-|++.-|- .+-.|.+.+|+|+|.-. +++ .++..-+.|-++ ..
T Consensus 818 iifs~va~k~eHvrr~~La----Dv~LDTplcnGh-TTg~dvLw~GvPmVTmpge~lAsrVa~--Sll~~~Gl~hli-ak 889 (966)
T KOG4626|consen 818 IIFSPVAAKEEHVRRGQLA----DVCLDTPLCNGH-TTGMDVLWAGVPMVTMPGETLASRVAA--SLLTALGLGHLI-AK 889 (966)
T ss_pred eeeccccchHHHHHhhhhh----hhcccCcCcCCc-ccchhhhccCCceeecccHHHHHHHHH--HHHHHcccHHHH-hh
Confidence 8888888888888999999 999988765443 34578899999998743 222 122222344444 24
Q ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-h--cCCHHHHHHHHHHHHHcccC
Q 002660 457 DQQSVADALLKLVADKQLWARCRQNGLKNI-H--LFSWPEHCKTYLSRIAGCKP 507 (895)
Q Consensus 457 d~~~la~ai~~ll~~~~~~~~~~~~~~~~~-~--~~s~~~~a~~~~~~~~~~~~ 507 (895)
+.++..+.-.++-+|.+..+.++..-+... . -|+-.+++..+.+.|.+.-+
T Consensus 890 ~~eEY~~iaV~Latd~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~MW~ 943 (966)
T KOG4626|consen 890 NREEYVQIAVRLATDKEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQMWK 943 (966)
T ss_pred hHHHHHHHHHHhhcCHHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHHHHH
Confidence 778888888888888888888888877766 3 79999999999999987643
No 321
>PLN03190 aminophospholipid translocase; Provisional
Probab=84.98 E-value=6.2 Score=50.94 Aligned_cols=41 Identities=17% Similarity=0.082 Sum_probs=37.4
Q ss_pred cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 625 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 625 ~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
..+.+.+.+++++|++. |+++.+.||-....+..+....++
T Consensus 725 D~lr~~v~~~I~~l~~a----gi~v~mlTGD~~~tAi~IA~s~~L 765 (1178)
T PLN03190 725 DKLQQGVPEAIESLRTA----GIKVWVLTGDKQETAISIGYSSKL 765 (1178)
T ss_pred cCCchhHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHhCC
Confidence 57788999999999998 599999999999999999998887
No 322
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=84.35 E-value=6.3 Score=39.40 Aligned_cols=73 Identities=8% Similarity=0.074 Sum_probs=31.9
Q ss_pred CCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCEEEeC
Q 002660 143 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 222 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~vi~~ 222 (895)
++||++.......-.-....+++.|+|++..-=-+....+ ..|+.+..+ .+..++..|.|.+.
T Consensus 94 ~~P~~~i~~EtElWPnll~~a~~~~ip~~LvNarls~~s~---------------~~~~~~~~~--~r~~l~~f~~i~aq 156 (186)
T PF04413_consen 94 WRPDLLIWVETELWPNLLREAKRRGIPVVLVNARLSERSF---------------RRYRRFPFL--FRPLLSRFDRILAQ 156 (186)
T ss_dssp H--SEEEEES----HHHHHH-----S-EEEEEE-----------------------------HH--HHHHGGG-SEEEES
T ss_pred hCCCEEEEEccccCHHHHHHHhhcCCCEEEEeeeeccccc---------------hhhhhhHHH--HHHHHHhCCEEEEC
Confidence 5699888776533333345667789997663322211110 011112222 34468999999999
Q ss_pred ChHHHHHHHh
Q 002660 223 TRQEIEEQWR 232 (895)
Q Consensus 223 s~~~~~~~~~ 232 (895)
|+...+.+..
T Consensus 157 s~~da~r~~~ 166 (186)
T PF04413_consen 157 SEADAERFRK 166 (186)
T ss_dssp SHHHHHHHHT
T ss_pred CHHHHHHHHH
Confidence 9998887644
No 323
>COG4996 Predicted phosphatase [General function prediction only]
Probab=84.34 E-value=2.3 Score=38.78 Aligned_cols=61 Identities=13% Similarity=0.023 Sum_probs=46.6
Q ss_pred eEEEEEecCCC-C--------------------------cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHH
Q 002660 613 HIFVISVDCDS-T--------------------------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLV 665 (895)
Q Consensus 613 kli~~DiDGTL-~--------------------------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~ 665 (895)
++|+||.|||| + -..-+..++.+++++.. |..+..+|=.-..-+.+.+.
T Consensus 1 ~~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warns----G~i~~~~sWN~~~kA~~aLr 76 (164)
T COG4996 1 RAIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNS----GYILGLASWNFEDKAIKALR 76 (164)
T ss_pred CcEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhC----CcEEEEeecCchHHHHHHHH
Confidence 47899999999 0 01345788999998887 59999999999998889999
Q ss_pred hCCCCCCCCCEEE
Q 002660 666 SGHLSPSDFDAFI 678 (895)
Q Consensus 666 ~l~l~~~~~d~~I 678 (895)
.+++. ..++++|
T Consensus 77 al~~~-~yFhy~V 88 (164)
T COG4996 77 ALDLL-QYFHYIV 88 (164)
T ss_pred Hhchh-hhEEEEE
Confidence 98874 2344443
No 324
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=83.89 E-value=2 Score=43.12 Aligned_cols=56 Identities=9% Similarity=0.128 Sum_probs=45.0
Q ss_pred cccCeEEEEEecCCCCc----------chhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 609 RRRKHIFVISVDCDSTT----------GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 609 ~~~~kli~~DiDGTL~~----------~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
+..||++++|+|+||-+ -.-+-+.+.|+.+.+. ..++|=|-.+..-+...+.++++
T Consensus 18 ~~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~~-----feIvVwTAa~~~ya~~~l~~l~~ 83 (195)
T TIGR02245 18 REGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYED-----YDIVIWSATSMKWIEIKMTELGV 83 (195)
T ss_pred CCCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHhC-----CEEEEEecCCHHHHHHHHHHhcc
Confidence 56779999999999931 1235678888888885 78889998888889999998875
No 325
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=83.48 E-value=1.7 Score=50.21 Aligned_cols=69 Identities=12% Similarity=0.162 Sum_probs=50.1
Q ss_pred cCeEEEEEecCCCC--------------cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHH---HHHHHhCCCCCCC
Q 002660 611 RKHIFVISVDCDST--------------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEI---HSFLVSGHLSPSD 673 (895)
Q Consensus 611 ~~kli~~DiDGTL~--------------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~---~~~l~~l~l~~~~ 673 (895)
..|+|+.|||||.| .-.+..+.++..+++++ |.+++.+|.|+...+ +.+|+.+.-
T Consensus 529 n~kIVISDIDGTITKSDvLGh~lp~iGkDWTh~GVAkLyt~Ik~N----GYk~lyLSARaIgQA~~TR~yL~nv~Q---- 600 (738)
T KOG2116|consen 529 NDKIVISDIDGTITKSDVLGHVLPMIGKDWTHTGVAKLYTKIKEN----GYKILYLSARAIGQADSTRQYLKNVEQ---- 600 (738)
T ss_pred CCcEEEecCCCceEhhhhhhhhhhhhcCcchhhhHHHHHHHHHhC----CeeEEEEehhhhhhhHHHHHHHHHHhh----
Confidence 57899999999994 12456788888999998 599999999988765 456665432
Q ss_pred CCEEEEcCCceEeec
Q 002660 674 FDAFICNSGSDLYYS 688 (895)
Q Consensus 674 ~d~~I~~nGa~I~~~ 688 (895)
|+.+.-.|-.|..+
T Consensus 601 -dG~~LPdGPViLSP 614 (738)
T KOG2116|consen 601 -DGKKLPDGPVILSP 614 (738)
T ss_pred -cCccCCCCCEEeCC
Confidence 34445556665544
No 326
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=83.28 E-value=62 Score=34.62 Aligned_cols=121 Identities=17% Similarity=0.120 Sum_probs=71.8
Q ss_pred CCCchhHHHHHHHHHHhcCCCeeEEEEeecCccCCCCCCCCCCcccccCCCCCCcccccCCCCCCeEEEecCCCCCCccc
Q 002660 27 DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYI 106 (895)
Q Consensus 27 ~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~~~~~~~y~~~~e~~~~~~~~~~~~~~~~~~gv~i~~i~~~~~~~~~ 106 (895)
+.-|-.+.+..|.+.|.++| |+|-|++-.++.|....+ .++. ...+......+|+.+..+|....-..
T Consensus 60 PGaGKSTli~~L~~~l~~~G--~rVaVlAVDPSSp~TGGs------iLGD---RiRM~~~~~~~~vFiRs~~srG~lGG- 127 (323)
T COG1703 60 PGAGKSTLIEALGRELRERG--HRVAVLAVDPSSPFTGGS------ILGD---RIRMQRLAVDPGVFIRSSPSRGTLGG- 127 (323)
T ss_pred CCCchHHHHHHHHHHHHHCC--cEEEEEEECCCCCCCCcc------cccc---HhhHHhhccCCCeEEeecCCCccchh-
Confidence 34466778999999999999 999999876554432111 1111 00112333456887777776432111
Q ss_pred ccccCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCcEEEeccccchhHHHHHhccCCCCEEEEeCCCchhh
Q 002660 107 AKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDK 181 (895)
Q Consensus 107 ~~~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvVh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~ 181 (895)
+.+-...++..+.. ..+|+|.....-.|..-.-+...-.+-++++..+.+.+.
T Consensus 128 --------lS~at~~~i~~ldA--------------aG~DvIIVETVGvGQsev~I~~~aDt~~~v~~pg~GD~~ 180 (323)
T COG1703 128 --------LSRATREAIKLLDA--------------AGYDVIIVETVGVGQSEVDIANMADTFLVVMIPGAGDDL 180 (323)
T ss_pred --------hhHHHHHHHHHHHh--------------cCCCEEEEEecCCCcchhHHhhhcceEEEEecCCCCcHH
Confidence 11112222222221 569999998775555555666666888888998887644
No 327
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=83.22 E-value=7.5 Score=45.41 Aligned_cols=39 Identities=18% Similarity=0.417 Sum_probs=31.7
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEe
Q 002660 797 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 797 sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaM 841 (895)
.|+.-++.|-++-|- .+ |++||++| | .+|+++|..||-.
T Consensus 768 QKA~v~~llq~~t~k---rv-c~IGDGGN-D-VsMIq~A~~GiGI 806 (1051)
T KOG0210|consen 768 QKAQVVRLLQKKTGK---RV-CAIGDGGN-D-VSMIQAADVGIGI 806 (1051)
T ss_pred HHHHHHHHHHHhhCc---eE-EEEcCCCc-c-chheeecccceee
Confidence 699999999888873 35 44999999 9 9999998877744
No 328
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=82.86 E-value=5.2 Score=39.32 Aligned_cols=30 Identities=13% Similarity=0.142 Sum_probs=24.8
Q ss_pred CCCcEEEeccccchhHHHHHhccC------CCCEEE
Q 002660 143 VWPVAIHGHYADAGDSAALLSGAL------NVPMLF 172 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~~~~~~~~~------~ip~v~ 172 (895)
.+||+|.++.+..+.....+++.+ |.++|+
T Consensus 91 ~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIy 126 (170)
T PF08660_consen 91 ERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIY 126 (170)
T ss_pred hCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEE
Confidence 689999999997777777777777 888765
No 329
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=82.82 E-value=8.7 Score=49.52 Aligned_cols=41 Identities=15% Similarity=0.109 Sum_probs=36.9
Q ss_pred cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 625 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 625 ~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
..+.+.+.++++.|++. |+++.+.||=....+..+..+.++
T Consensus 630 D~lq~~v~etI~~L~~A----GIkv~mlTGD~~~TA~~IA~~~~i 670 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQA----GIKIWVLTGDKVETAINIGYSCRL 670 (1057)
T ss_pred hhhhhccHHHHHHHHHC----CCeEEEEcCCcHHHHHHHHHHhCC
Confidence 45667889999999998 599999999999999999999887
No 330
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=81.06 E-value=1.8 Score=35.93 Aligned_cols=43 Identities=26% Similarity=0.254 Sum_probs=34.8
Q ss_pred HHHHHHHHHhCCCcccEEEEecCC-CCCCccccccCcce-EEEecCcc
Q 002660 800 QALRYLYLRWGVELSKMVVFVGES-GDTDYEGLLGGVHK-TVILKGIC 845 (895)
Q Consensus 800 ~al~~L~~~~gi~~~~viaf~Gd~-nn~D~~eMl~~ag~-gVaMgNa~ 845 (895)
..+...+++++++++++++ +||+ .. | +.+=+.+|. +|.+..+.
T Consensus 8 ~~~~~a~~~~~~~~~~~~~-VGD~~~~-D-i~~a~~~G~~~ilV~tG~ 52 (75)
T PF13242_consen 8 GMLEQALKRLGVDPSRCVM-VGDSLET-D-IEAAKAAGIDTILVLTGV 52 (75)
T ss_dssp HHHHHHHHHHTSGGGGEEE-EESSTTT-H-HHHHHHTTSEEEEESSSS
T ss_pred HHHHHHHHHcCCCHHHEEE-EcCCcHh-H-HHHHHHcCCcEEEECCCC
Confidence 4567888999999999999 7777 65 8 999999985 66666655
No 331
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=81.06 E-value=4.1 Score=44.38 Aligned_cols=197 Identities=14% Similarity=0.178 Sum_probs=95.9
Q ss_pred cCeEEEEEecCCC--C----cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHh----------C-CCCCCC
Q 002660 611 RKHIFVISVDCDS--T----TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVS----------G-HLSPSD 673 (895)
Q Consensus 611 ~~kli~~DiDGTL--~----~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~----------l-~l~~~~ 673 (895)
.=||+-||=|+|| + ....+.+...++-|+. |+.|+|+|.=.+.++.++-+. . .++...
T Consensus 146 ~L~LvTFDgDvTLY~DG~sl~~d~pvi~~ii~LL~~-----gv~VgIVTAAGY~~a~kY~~RL~GLL~a~~~~~~Lt~~q 220 (408)
T PF06437_consen 146 GLKLVTFDGDVTLYEDGASLEPDNPVIPRIIKLLRR-----GVKVGIVTAAGYPGAEKYEERLHGLLDAFKDSTDLTPEQ 220 (408)
T ss_pred CceEEEEcCCcccccCCCCCCCCchHHHHHHHHHhc-----CCeEEEEeCCCCCChHHHHHHHHHHHHHHHhccCCCHHH
Confidence 4579999999999 2 2344555555555444 599999998776665544333 2 332100
Q ss_pred CCEEEEcCCc--eEeeccCC-CCCCCcccchhhHHHhhcccCcchHHHHHHhhhhhccccccccCCc-ccccccccCCce
Q 002660 674 FDAFICNSGS--DLYYSTLN-SEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEK-VLTPAEQLSTNY 749 (895)
Q Consensus 674 ~d~~I~~nGa--~I~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 749 (895)
-..++-..|- +....... ........+..|...-...|..+.+..++...............-+ .+. ....
T Consensus 221 k~~l~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~~~m~~W~~~dI~~lLD~AE~~L~~~~~~l~Lpa~Ii-----RK~R 295 (408)
T PF06437_consen 221 KSNLYVMGGESNYLFRYDPESPHGLEFVPREEWLLPEMKTWSEEDITELLDIAEAALRDCVKRLNLPATII-----RKER 295 (408)
T ss_pred hcCEEEecccceeEEEecCCCCCCeEEccHHhccCccccCcCHHHHHHHHHHHHHHHHHHHHHcCCCeeEE-----eecc
Confidence 0123332332 22211111 1223444566787666677887777777643322111110000000 000 0000
Q ss_pred EEEEEeeCCCC---CccHHHH----HHHHHhc--cCeEEEEEecCC--eeEEeecCCCChHHHHHHHHHHh----CCCcc
Q 002660 750 CYAFSVQKPGM---TPPVKEL----RKVLRIQ--ALRCHVIYCQNG--SRINVIPVLASRSQALRYLYLRW----GVELS 814 (895)
Q Consensus 750 k~~~~~~~~~~---~~~~~~l----~~~l~~~--~~~~~~~~s~~~--~~lEI~p~g~sKg~al~~L~~~~----gi~~~ 814 (895)
.+-.. ..+.. -+.++|+ +..+... +.++.+..-.++ -++|| .+|.-|++.|.+++ +|.++
T Consensus 296 AVGiv-P~~~~ki~rE~LEE~VL~vq~~L~~~~~~~~ipfCAFNGGsDVwVDI----GdKs~GV~~lQ~y~~~~~~i~~~ 370 (408)
T PF06437_consen 296 AVGIV-PKPGVKIIREQLEEIVLTVQKTLEESPPGRRIPFCAFNGGSDVWVDI----GDKSLGVRALQKYFDPEGGIKPS 370 (408)
T ss_pred eeeEe-cCCCCcchhhhHHHHHHHHHHHHHhcCCCCCCceeeecCCcceEEEc----CCcHHhHHHHHHHHHhccCCCcc
Confidence 01111 01110 1112222 2333322 112333332332 15665 58999999999999 99999
Q ss_pred cEEEEecCC
Q 002660 815 KMVVFVGES 823 (895)
Q Consensus 815 ~viaf~Gd~ 823 (895)
+++= +||.
T Consensus 371 ~tLH-VGDQ 378 (408)
T PF06437_consen 371 ETLH-VGDQ 378 (408)
T ss_pred ceee-ehhh
Confidence 9998 7774
No 332
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=79.95 E-value=1.6 Score=42.98 Aligned_cols=36 Identities=19% Similarity=0.218 Sum_probs=25.1
Q ss_pred hHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcc
Q 002660 798 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVH 836 (895)
Q Consensus 798 Kg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag 836 (895)
|.--+..++++++++++..++ +||.-. | ++.=..+|
T Consensus 107 ~~gm~~~~~~~~~iD~~~s~~-VGD~~~-D-lq~a~n~g 142 (181)
T COG0241 107 KPGMLLSALKEYNIDLSRSYV-VGDRLT-D-LQAAENAG 142 (181)
T ss_pred ChHHHHHHHHHhCCCccceEE-ecCcHH-H-HHHHHHCC
Confidence 344567778888899888888 888765 6 65544444
No 333
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=79.47 E-value=4.4 Score=39.22 Aligned_cols=56 Identities=14% Similarity=0.013 Sum_probs=41.6
Q ss_pred cccCeEEEEEecCCCC-----cc---------------------------------hhHHHHHHHHHHHhhccCCCeEEE
Q 002660 609 RRRKHIFVISVDCDST-----TG---------------------------------LLDATKKICEAVEKERTEGSIGFI 650 (895)
Q Consensus 609 ~~~~kli~~DiDGTL~-----~~---------------------------------~~~~~~~~l~~l~~~g~~~g~~v~ 650 (895)
..+|+.+++|+|.||. .. .-+.+.+.|+.+++. ..++
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~-----yel~ 77 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKL-----YEMH 77 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhh-----cEEE
Confidence 5678899999999991 00 023567777777743 7888
Q ss_pred EEcCCCHHHHHHHHHhCCC
Q 002660 651 LSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 651 iaTGR~~~~~~~~l~~l~l 669 (895)
|+|.-+...+..+++.++.
T Consensus 78 I~T~~~~~yA~~vl~~ldp 96 (156)
T TIGR02250 78 VYTMGTRAYAQAIAKLIDP 96 (156)
T ss_pred EEeCCcHHHHHHHHHHhCc
Confidence 8888888888888888765
No 334
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=78.92 E-value=5.1 Score=39.03 Aligned_cols=55 Identities=15% Similarity=0.054 Sum_probs=36.6
Q ss_pred hhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCC----CCCCCCCEEEEcCCceEeecc
Q 002660 627 LLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGH----LSPSDFDAFICNSGSDLYYST 689 (895)
Q Consensus 627 ~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~----l~~~~~d~~I~~nGa~I~~~~ 689 (895)
+.+..++.+++++++ ++.|++.||-+-..+.++++.+. +. ..=|.+|-.+|...+
T Consensus 74 Idp~fKef~e~ike~----di~fiVvSsGm~~fI~~lfe~ivgke~i~----~idi~sn~~~ih~dg 132 (220)
T COG4359 74 IDPGFKEFVEWIKEH----DIPFIVVSSGMDPFIYPLFEGIVGKERIY----CIDIVSNNDYIHIDG 132 (220)
T ss_pred cCccHHHHHHHHHHc----CCCEEEEeCCCchHHHHHHHhhcccccee----eeEEeecCceEcCCC
Confidence 445667788888888 47777777777778888888875 31 123455656665444
No 335
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=78.53 E-value=11 Score=36.89 Aligned_cols=63 Identities=14% Similarity=0.094 Sum_probs=38.5
Q ss_pred CCCcEEEeccccchhH-HHHH--hccC-CCCEEEEeCCCchhhHHHHHHHhhccHHHHHhhhhhhHHHHHHHhhhcccCE
Q 002660 143 VWPVAIHGHYADAGDS-AALL--SGAL-NVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEI 218 (895)
Q Consensus 143 ~~pDvVh~h~~~~~~~-~~~~--~~~~-~ip~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ad~ 218 (895)
.+||+|.|.++.+..+ ...+ ...+ ++|++..+-|+.... + . +.-..+|.
T Consensus 88 ~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvTD~~~~H-------~--------------~------W~~~~~D~ 140 (169)
T PF06925_consen 88 FQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVTDFDTVH-------P--------------F------WIHPGVDR 140 (169)
T ss_pred cCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEcCCCCCC-------c--------------C------eecCCCCE
Confidence 7899999988754444 3323 2234 578765444542100 0 0 13678999
Q ss_pred EEeCChHHHHHHHh
Q 002660 219 VITSTRQEIEEQWR 232 (895)
Q Consensus 219 vi~~s~~~~~~~~~ 232 (895)
.++.|+...+++.+
T Consensus 141 y~Vase~~~~~l~~ 154 (169)
T PF06925_consen 141 YFVASEEVKEELIE 154 (169)
T ss_pred EEECCHHHHHHHHH
Confidence 99999987777643
No 336
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=77.42 E-value=12 Score=45.04 Aligned_cols=40 Identities=8% Similarity=0.076 Sum_probs=35.9
Q ss_pred chhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 626 GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 626 ~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
...+.++++++.++.. |+.|-.+||-+...++.+..+.|+
T Consensus 647 PvRPgV~~AV~~Cq~A----GItVRMVTGDNI~TAkAIA~eCGI 686 (1034)
T KOG0204|consen 647 PVRPGVPEAVQLCQRA----GITVRMVTGDNINTAKAIARECGI 686 (1034)
T ss_pred CCCCCcHHHHHHHHHc----CcEEEEEeCCcHHHHHHHHHHccc
Confidence 4557889999998887 699999999999999999999997
No 337
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=75.80 E-value=3.8 Score=37.54 Aligned_cols=27 Identities=22% Similarity=0.261 Sum_probs=21.9
Q ss_pred CcccEEEEecCCCCCCccccccCcceEEEe
Q 002660 812 ELSKMVVFVGESGDTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 812 ~~~~viaf~Gd~nn~D~~eMl~~ag~gVaM 841 (895)
+-+.+++ +||.+| | +-||+.+.+||+.
T Consensus 92 ~~~k~vm-VGnGaN-D-~laLr~ADlGI~t 118 (152)
T COG4087 92 RYEKVVM-VGNGAN-D-ILALREADLGICT 118 (152)
T ss_pred CCcEEEE-ecCCcc-h-HHHhhhcccceEE
Confidence 3345555 899999 9 9999999999865
No 338
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=74.57 E-value=2.7 Score=42.19 Aligned_cols=35 Identities=9% Similarity=0.105 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHhhccCCCeEEEEEcCCCHH-------HHHHHHHhC
Q 002660 629 DATKKICEAVEKERTEGSIGFILSTSMTIS-------EIHSFLVSG 667 (895)
Q Consensus 629 ~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~-------~~~~~l~~l 667 (895)
+...+++++|.+. |..++++|+|+.. .-.+|+++.
T Consensus 76 ~gA~e~l~~L~~~----g~~~~~Itar~~~~~~~~~~~k~~Wl~~h 117 (191)
T PF06941_consen 76 PGAVEALKKLRDK----GHEIVIITARPPEFPDHSAEEKREWLERH 117 (191)
T ss_dssp TTHHHHHHHHHTS----TTEEEEEEE-SSSSGCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc----CCcEEEEEecCccccchHHHHHHHHHHHH
Confidence 4456667777765 3555566666543 445666664
No 339
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=73.81 E-value=5.4 Score=38.87 Aligned_cols=53 Identities=15% Similarity=0.008 Sum_probs=40.5
Q ss_pred CeEEEEEecCCCC-----c----------------------chhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHH
Q 002660 612 KHIFVISVDCDST-----T----------------------GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFL 664 (895)
Q Consensus 612 ~kli~~DiDGTL~-----~----------------------~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l 664 (895)
|+.+++|+|+||- . ..-+.+.+.|+.+.+. ..++|.|--+...+..++
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~-----yei~I~Ts~~~~yA~~il 75 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKW-----YELVIFTASLEEYADPVL 75 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhc-----CEEEEEcCCcHHHHHHHH
Confidence 4689999999991 1 1234577888888775 788888888888888888
Q ss_pred HhCCC
Q 002660 665 VSGHL 669 (895)
Q Consensus 665 ~~l~l 669 (895)
+.++.
T Consensus 76 ~~ldp 80 (162)
T TIGR02251 76 DILDR 80 (162)
T ss_pred HHHCc
Confidence 88775
No 340
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=73.72 E-value=25 Score=37.34 Aligned_cols=125 Identities=10% Similarity=0.077 Sum_probs=67.9
Q ss_pred CCCCcEEEEEeCCCCC-------CCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCC
Q 002660 310 NPRKPVILALARPDPK-------KNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYG 382 (895)
Q Consensus 310 ~~~~~~il~vgrl~~~-------Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~ 382 (895)
..++++|++....... ......++.+..+.+..| +..|++=..|....... . .......-..
T Consensus 114 ~~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p--~~~lvvK~HP~~~~~~~--~-------~~~~~~~~~~ 182 (269)
T PF05159_consen 114 SKNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENP--DAKLVVKPHPDERGGNK--Y-------SYLEELPNLP 182 (269)
T ss_pred cCCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCC--CCEEEEEECchhhCCCC--h-------hHhhhhhcCC
Confidence 4567888888876544 234455566655543333 55556644442111000 0 2222221123
Q ss_pred cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHH
Q 002660 383 QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVA 462 (895)
Q Consensus 383 ~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la 462 (895)
++.+... .-.+.+++..| |.++.- .+.+-+||+..|+||++-...-- ...|+..+....+.+.
T Consensus 183 ~~~~~~~--~~~~~~Ll~~s----~~Vvti-----nStvGlEAll~gkpVi~~G~~~Y------~~~glt~~~~~~~~~~ 245 (269)
T PF05159_consen 183 NVVIIDD--DVNLYELLEQS----DAVVTI-----NSTVGLEALLHGKPVIVFGRAFY------AGWGLTDDRKLDEFWR 245 (269)
T ss_pred CeEEECC--CCCHHHHHHhC----CEEEEE-----CCHHHHHHHHcCCceEEecCccc------CCCCccCcCCchhhhh
Confidence 3333322 45889999999 665533 34799999999999999543221 1345555544433333
No 341
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=73.54 E-value=7.4 Score=34.21 Aligned_cols=80 Identities=18% Similarity=0.230 Sum_probs=53.4
Q ss_pred EEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEe--CCCCCCCC--HHHHHHHhhcCCcEEEecCCC---CCCchH
Q 002660 349 LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAY--PKHHKQSD--VPEIYRLAAKTKGVFINPAFI---EPFGLT 421 (895)
Q Consensus 349 livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~--~g~~~~~e--l~~ly~~A~~~~dv~v~ps~~---Eg~gl~ 421 (895)
+|+|+.++ ....+...++++|..- +.+ .+...... ++.....| |++|++..+ ..+..+
T Consensus 3 liVGG~~~----------~~~~~~~~~~~~G~~~-~~hg~~~~~~~~~~~l~~~i~~a----D~VIv~t~~vsH~~~~~v 67 (97)
T PF10087_consen 3 LIVGGRED----------RERRYKRILEKYGGKL-IHHGRDGGDEKKASRLPSKIKKA----DLVIVFTDYVSHNAMWKV 67 (97)
T ss_pred EEEcCCcc----------cHHHHHHHHHHcCCEE-EEEecCCCCccchhHHHHhcCCC----CEEEEEeCCcChHHHHHH
Confidence 57777443 2466777888887643 333 24444444 88899999 999888643 334455
Q ss_pred HHHHHHcCCCEEEcCCCCchhc
Q 002660 422 LIEAAAHGLPIVATKNGGPVDI 443 (895)
Q Consensus 422 ~~Ea~a~G~PVvas~~gg~~ei 443 (895)
--+|-..|+|++-+...|...+
T Consensus 68 k~~akk~~ip~~~~~~~~~~~l 89 (97)
T PF10087_consen 68 KKAAKKYGIPIIYSRSRGVSSL 89 (97)
T ss_pred HHHHHHcCCcEEEECCCCHHHH
Confidence 5677788999999987666555
No 342
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=73.24 E-value=1.1e+02 Score=30.87 Aligned_cols=59 Identities=7% Similarity=0.079 Sum_probs=40.7
Q ss_pred cCeEEEEEecCCC--CcchhHHHHHHHHHHHhhccCCCeEEEEE-cCCCHHHHHHHHHhCCCCC
Q 002660 611 RKHIFVISVDCDS--TTGLLDATKKICEAVEKERTEGSIGFILS-TSMTISEIHSFLVSGHLSP 671 (895)
Q Consensus 611 ~~kli~~DiDGTL--~~~~~~~~~~~l~~l~~~g~~~g~~v~ia-TGR~~~~~~~~l~~l~l~~ 671 (895)
.-|-+.+|+-||| .....+...++++.|+.++ -.++|+=. |+-+...+.+-|..+|++.
T Consensus 6 ~v~gvLlDlSGtLh~e~~avpga~eAl~rLr~~~--~kVkFvTNttk~Sk~~l~~rL~rlgf~v 67 (262)
T KOG3040|consen 6 AVKGVLLDLSGTLHIEDAAVPGAVEALKRLRDQH--VKVKFVTNTTKESKRNLHERLQRLGFDV 67 (262)
T ss_pred ccceEEEeccceEecccccCCCHHHHHHHHHhcC--ceEEEEecCcchhHHHHHHHHHHhCCCc
Confidence 3467889999999 3455667889999999763 23444332 3556667777788888853
No 343
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=71.74 E-value=8.2 Score=47.04 Aligned_cols=41 Identities=15% Similarity=0.223 Sum_probs=37.5
Q ss_pred cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 625 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 625 ~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
++..+.++..+++|.+. ++..+.|||-++..+....++.|+
T Consensus 704 NkLK~~T~~VI~eL~~A----nIRtVMcTGDNllTaisVakeCgm 744 (1140)
T KOG0208|consen 704 NKLKEETKRVIDELNRA----NIRTVMCTGDNLLTAISVAKECGM 744 (1140)
T ss_pred cccccccHHHHHHHHhh----cceEEEEcCCchheeeehhhcccc
Confidence 67788999999999998 699999999999999999999987
No 344
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=70.91 E-value=1.8e+02 Score=32.50 Aligned_cols=83 Identities=14% Similarity=0.209 Sum_probs=49.8
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCC-CCchhcccc-CCCe--EEeCCCC
Q 002660 382 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN-GGPVDIHRV-LDNG--LLVDPHD 457 (895)
Q Consensus 382 ~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~-gg~~eiv~~-~~~g--~lv~p~d 457 (895)
.++.+..--..+++-..++.+ |++|-.-+ =.++=|++.|+|+|+-.. +-...+.++ +-.+ .-+.|.|
T Consensus 266 ~~i~~~~d~~~~~~~~~l~~~----dl~Vg~R~-----HsaI~al~~g~p~i~i~Y~~K~~~l~~~~gl~~~~~~i~~~~ 336 (385)
T COG2327 266 AEILVSSDEYAEELGGILAAC----DLIVGMRL-----HSAIMALAFGVPAIAIAYDPKVRGLMQDLGLPGFAIDIDPLD 336 (385)
T ss_pred cceEeecchHHHHHHHHhccC----ceEEeehh-----HHHHHHHhcCCCeEEEeecHHHHHHHHHcCCCcccccCCCCc
Confidence 444443321135666688888 88774422 257889999999998542 222233322 1122 3445678
Q ss_pred HHHHHHHHHHHHhCHH
Q 002660 458 QQSVADALLKLVADKQ 473 (895)
Q Consensus 458 ~~~la~ai~~ll~~~~ 473 (895)
.+.+.+...+.++..+
T Consensus 337 ~~~l~~~~~e~~~~~~ 352 (385)
T COG2327 337 AEILSAVVLERLTKLD 352 (385)
T ss_pred hHHHHHHHHHHHhccH
Confidence 8889888888887443
No 345
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=70.85 E-value=35 Score=39.64 Aligned_cols=107 Identities=20% Similarity=0.172 Sum_probs=75.4
Q ss_pred cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC-CCCCchHHHHHHHcCCCEEEcCCCCch---------------hccc-
Q 002660 383 QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF-IEPFGLTLIEAAAHGLPIVATKNGGPV---------------DIHR- 445 (895)
Q Consensus 383 ~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~-~Eg~gl~~~Ea~a~G~PVvas~~gg~~---------------eiv~- 445 (895)
.|.=+|.++.+++..+++.| -|||=.-. +| |=+.+||+|.|+|.|-...-.+. ++-.
T Consensus 323 ~V~NHG~l~~~ef~~lL~~a----kvfiGlGfP~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQ 396 (559)
T PF15024_consen 323 FVKNHGILSGDEFQQLLRKA----KVFIGLGFPYE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQ 396 (559)
T ss_pred hhhhcCcCCHHHHHHHHHhh----hEeeecCCCCC--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccC
Confidence 35557888999999999999 89884421 22 34789999999988875532221 1111
Q ss_pred --------cCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHHc
Q 002660 446 --------VLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAG 504 (895)
Q Consensus 446 --------~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~~ 504 (895)
..-.-+.|+-+|.+++-+||.++++.+- --++ -.|+-+.+.+++-.+++.
T Consensus 397 hPY~e~~iG~PhVytVd~~n~~~v~~Avk~il~~~v---------~Py~P~efT~egmLeRv~~~ie~ 455 (559)
T PF15024_consen 397 HPYAEEFIGEPHVYTVDINNSTEVEAAVKAILATPV---------EPYLPYEFTCEGMLERVNALIEK 455 (559)
T ss_pred ChHHHhhCCCCeEEEEcCCCHHHHHHHHHHHHhcCC---------CCcCCcccCHHHHHHHHHHHHHh
Confidence 1123578888999999999999998752 1344 478888888888777763
No 346
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=70.25 E-value=6.7 Score=36.01 Aligned_cols=50 Identities=4% Similarity=0.002 Sum_probs=43.2
Q ss_pred EEEecCCCC--cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCC
Q 002660 616 VISVDCDST--TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 670 (895)
Q Consensus 616 ~~DiDGTL~--~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~ 670 (895)
+-++++|+. ...-+++.+.++.|++. ++++||||-.+.++.+.++-.|++
T Consensus 18 ~~~v~~tiatgGklf~ev~e~iqeL~d~-----V~i~IASgDr~gsl~~lae~~gi~ 69 (152)
T COG4087 18 AGKVLYTIATGGKLFSEVSETIQELHDM-----VDIYIASGDRKGSLVQLAEFVGIP 69 (152)
T ss_pred cceEEEEEccCcEEcHhhHHHHHHHHHh-----heEEEecCCcchHHHHHHHHcCCc
Confidence 457888983 56778888999999987 899999999999999999999984
No 347
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=68.61 E-value=1.7e+02 Score=31.38 Aligned_cols=39 Identities=28% Similarity=0.366 Sum_probs=29.7
Q ss_pred CCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEc
Q 002660 388 KHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVAT 435 (895)
Q Consensus 388 g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas 435 (895)
...+.+++.++++.| +++|-..+ =.++=|+.+|+|+++-
T Consensus 237 ~~~~~~e~~~~i~~~----~~vI~~Rl-----H~~I~A~~~gvP~i~i 275 (298)
T TIGR03609 237 SPLDPEELLGLFASA----RLVIGMRL-----HALILAAAAGVPFVAL 275 (298)
T ss_pred ecCCHHHHHHHHhhC----CEEEEech-----HHHHHHHHcCCCEEEe
Confidence 444567888999999 88775543 2577899999999975
No 348
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=67.57 E-value=6 Score=39.33 Aligned_cols=40 Identities=10% Similarity=-0.005 Sum_probs=32.4
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEE
Q 002660 797 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTV 839 (895)
Q Consensus 797 sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gV 839 (895)
-+-..+...++++|+++++++. +||+.. | ++.=+.+|..+
T Consensus 143 P~p~~~~~~~~~~~~~~~~~l~-igDs~~-d-i~aA~~aG~~~ 182 (188)
T PRK10725 143 PAPDTFLRCAQLMGVQPTQCVV-FEDADF-G-IQAARAAGMDA 182 (188)
T ss_pred CChHHHHHHHHHcCCCHHHeEE-EeccHh-h-HHHHHHCCCEE
Confidence 3556799999999999999999 788776 7 88777777654
No 349
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=66.52 E-value=3.9 Score=44.99 Aligned_cols=68 Identities=19% Similarity=0.149 Sum_probs=44.3
Q ss_pred cccCeEEEEEecCCCCcc--------------hhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCC
Q 002660 609 RRRKHIFVISVDCDSTTG--------------LLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDF 674 (895)
Q Consensus 609 ~~~~kli~~DiDGTL~~~--------------~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~ 674 (895)
+..+|+|++|||||+|+. .+..+.+..-.+-.+ |..+..-|.|++..+..-..-+
T Consensus 372 r~n~kiVVsDiDGTITkSD~~Ghv~~miGkdwth~gVAkLYtdI~rN----GYkI~YltsR~~Gqa~sTrsyl------- 440 (580)
T COG5083 372 RNNKKIVVSDIDGTITKSDALGHVKQMIGKDWTHNGVAKLYTDIDRN----GYKIKYLTSRSYGQADSTRSYL------- 440 (580)
T ss_pred eCCCcEEEEecCCcEEehhhHHHHHHHhccchhhcchhhhhhhhccC----ceEEEEEecccccchhhhhhHH-------
Confidence 467899999999999532 222344445555555 5899999999987654322221
Q ss_pred CEEEEcCCceEeec
Q 002660 675 DAFICNSGSDLYYS 688 (895)
Q Consensus 675 d~~I~~nGa~I~~~ 688 (895)
..||.||.+..+.
T Consensus 441 -rnieQngykLpdg 453 (580)
T COG5083 441 -RNIEQNGYKLPDG 453 (580)
T ss_pred -HhhhhcCccCCCC
Confidence 2467777776554
No 350
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=66.39 E-value=11 Score=38.00 Aligned_cols=45 Identities=18% Similarity=0.211 Sum_probs=36.4
Q ss_pred HHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEc
Q 002660 631 TKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 680 (895)
Q Consensus 631 ~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 680 (895)
..++|+.|+++ |+.++|+||.+...+...++.+|+. ..+|.+++.
T Consensus 111 ~~~~L~~l~~~----g~~~~i~T~~~~~~~~~~l~~~gl~-~~f~~~~~~ 155 (197)
T TIGR01548 111 PKGLLRELHRA----PKGMAVVTGRPRKDAAKFLTTHGLE-ILFPVQIWM 155 (197)
T ss_pred HHHHHHHHHHc----CCcEEEECCCCHHHHHHHHHHcCch-hhCCEEEee
Confidence 37888888876 5999999999999999999999985 345555553
No 351
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=65.88 E-value=4.8 Score=41.14 Aligned_cols=46 Identities=15% Similarity=0.045 Sum_probs=33.2
Q ss_pred eecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEec
Q 002660 791 VIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 842 (895)
Q Consensus 791 I~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMg 842 (895)
....|..|-..|+.++ +.+.+..++ -||+-+ | ++||+.|+.++++.
T Consensus 156 ~~c~g~~Kv~rl~~~~---~~~~~~~~a-YsDS~~-D-~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 156 LRCLGHEKVAQLEQKI---GSPLKLYSG-YSDSKQ-D-NPLLAFCEHRWRVS 201 (210)
T ss_pred ccCCChHHHHHHHHHh---CCChhheEE-ecCCcc-c-HHHHHhCCCcEEEC
Confidence 3345566777776555 446667777 566666 6 99999999999985
No 352
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=65.77 E-value=3.2 Score=42.20 Aligned_cols=33 Identities=15% Similarity=0.195 Sum_probs=27.8
Q ss_pred HHHHHHHHhCCCcccEEEEecCCCCCCccccccCcc
Q 002660 801 ALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVH 836 (895)
Q Consensus 801 al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag 836 (895)
.+..+++.++++++++++ +||+-| | +.|++.||
T Consensus 183 ~~~~~i~~l~~~~~~v~~-vGDg~n-D-~~al~~Ag 215 (215)
T PF00702_consen 183 IFLRIIKELQVKPGEVAM-VGDGVN-D-APALKAAG 215 (215)
T ss_dssp HHHHHHHHHTCTGGGEEE-EESSGG-H-HHHHHHSS
T ss_pred hHHHHHHHHhcCCCEEEE-EccCHH-H-HHHHHhCc
Confidence 668889999999998877 777777 8 99999886
No 353
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=65.64 E-value=5.5 Score=43.10 Aligned_cols=70 Identities=21% Similarity=0.192 Sum_probs=48.9
Q ss_pred CCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCC-CEEEcC--CCCchhccccCCCeEEeCCCCHHHHHHHHH
Q 002660 393 SDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGL-PIVATK--NGGPVDIHRVLDNGLLVDPHDQQSVADALL 466 (895)
Q Consensus 393 ~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~-PVvas~--~gg~~eiv~~~~~g~lv~p~d~~~la~ai~ 466 (895)
.+..+.++.+ .+++.|.-..++..-++|||++|+ |||.++ .-...+++.-....+.++..+..++.+.|+
T Consensus 228 ~~~~~~l~~S----~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~~~~l~~iL~ 300 (302)
T PF03016_consen 228 SEYMELLRNS----KFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEADLPELPEILR 300 (302)
T ss_pred hHHHHhcccC----eEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHHHHHHHHHHh
Confidence 3577888888 888888666568899999999995 888765 234455664445567776655555555443
No 354
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=65.58 E-value=9.2 Score=38.72 Aligned_cols=52 Identities=13% Similarity=0.103 Sum_probs=42.5
Q ss_pred EEEEEecCCC------CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 614 IFVISVDCDS------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 614 li~~DiDGTL------~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
.+++.+|+++ ...+.+.++++|+.|++. |+.++|+||-+...+..+.+.+|+
T Consensus 109 ~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~L~~~----Gi~~~i~TGD~~~~a~~~~~~lgi 166 (215)
T PF00702_consen 109 VIVLAVNLIFLGLFGLRDPLRPGAKEALQELKEA----GIKVAILTGDNESTASAIAKQLGI 166 (215)
T ss_dssp CEEEEESHEEEEEEEEEEEBHTTHHHHHHHHHHT----TEEEEEEESSEHHHHHHHHHHTTS
T ss_pred ccceeecCeEEEEEeecCcchhhhhhhhhhhhcc----Ccceeeeecccccccccccccccc
Confidence 3444445555 245677899999999998 599999999999999999999999
No 355
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=65.31 E-value=29 Score=40.57 Aligned_cols=113 Identities=18% Similarity=0.233 Sum_probs=67.3
Q ss_pred CCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCC-C---CchhccccCCCeEEeCCC
Q 002660 381 YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN-G---GPVDIHRVLDNGLLVDPH 456 (895)
Q Consensus 381 ~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~-g---g~~eiv~~~~~g~lv~p~ 456 (895)
.++|.+.+++|+.++. .+.+...+||. +-|+|-+ +|++.+|+|+|+... | -....+.....+.+.+..
T Consensus 334 ~~nV~~~~W~PQ~~ll----l~H~~v~~FvT---HgG~nSt-~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~ 405 (496)
T KOG1192|consen 334 RGNVVLSKWAPQNDLL----LDHPAVGGFVT---HGGWNST-LESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKR 405 (496)
T ss_pred cCceEEecCCCcHHHh----cCCCcCcEEEE---CCcccHH-HHHHhcCCceecCCccccchhHHHHHHhCCCEEEEehh
Confidence 4579999999988766 33222345542 3466655 999999999996543 2 222333333333333332
Q ss_pred ---CHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHH
Q 002660 457 ---DQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIA 503 (895)
Q Consensus 457 ---d~~~la~ai~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~~~~ 503 (895)
+.+ +.+++..++++++..+...+-+.... +..+. ..+..+.+...
T Consensus 406 ~~~~~~-~~~~~~~il~~~~y~~~~~~l~~~~~~~p~~~-~~~~~~~e~~~ 454 (496)
T KOG1192|consen 406 DLVSEE-LLEAIKEILENEEYKEAAKRLSEILRDQPISP-ELAVKWVEFVA 454 (496)
T ss_pred hcCcHH-HHHHHHHHHcChHHHHHHHHHHHHHHcCCCCH-HHHHHHHHHHH
Confidence 333 88999999998886555544444434 35666 55554444333
No 356
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=65.22 E-value=68 Score=34.90 Aligned_cols=100 Identities=11% Similarity=-0.027 Sum_probs=59.3
Q ss_pred CCcEEEEEeCCCCCCCH--HHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCC
Q 002660 312 RKPVILALARPDPKKNI--TTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKH 389 (895)
Q Consensus 312 ~~~~il~vgrl~~~Kgi--~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~ 389 (895)
++.+++..|.-...|.. +...+.++.+.+ ....++ +++++++. .+..+++ .+..+ ...+.|.
T Consensus 179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~--~~~~~v-l~~g~~~e-------~~~~~~i---~~~~~---~~~l~g~ 242 (319)
T TIGR02193 179 APYAVLLHATSRDDKTWPEERWRELARLLLA--RGLQIV-LPWGNDAE-------KQRAERI---AEALP---GAVVLPK 242 (319)
T ss_pred CCEEEEEeCCCcccCCCCHHHHHHHHHHHHH--CCCeEE-EeCCCHHH-------HHHHHHH---HhhCC---CCeecCC
Confidence 44566777765567765 366666666642 234443 44333321 1122223 22222 2356688
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcC
Q 002660 390 HKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK 436 (895)
Q Consensus 390 ~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~ 436 (895)
.+..++.++++.| |++|-. |+ -.+-=|.|.|+|+|+-.
T Consensus 243 ~sL~el~ali~~a----~l~I~~---DS--gp~HlAaa~g~P~i~lf 280 (319)
T TIGR02193 243 MSLAEVAALLAGA----DAVVGV---DT--GLTHLAAALDKPTVTLY 280 (319)
T ss_pred CCHHHHHHHHHcC----CEEEeC---CC--hHHHHHHHcCCCEEEEE
Confidence 8888999999999 998866 33 33445778899999854
No 357
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=63.96 E-value=12 Score=39.32 Aligned_cols=48 Identities=19% Similarity=0.115 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcC
Q 002660 629 DATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNS 681 (895)
Q Consensus 629 ~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~n 681 (895)
+.+.++|+.|+++ |+.++|+|+.+...+...++.+++. ..+|.++|..
T Consensus 111 pgv~e~L~~L~~~----g~~l~I~Tn~~~~~~~~~l~~~gl~-~~Fd~iv~~~ 158 (248)
T PLN02770 111 NGLYKLKKWIEDR----GLKRAAVTNAPRENAELMISLLGLS-DFFQAVIIGS 158 (248)
T ss_pred ccHHHHHHHHHHc----CCeEEEEeCCCHHHHHHHHHHcCCh-hhCcEEEecC
Confidence 3567888889887 5999999999999999999999985 3467777754
No 358
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=63.83 E-value=46 Score=36.54 Aligned_cols=104 Identities=12% Similarity=0.078 Sum_probs=60.6
Q ss_pred cCCCCCc-EEEEEeC-CCCCCCHH--HHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCc
Q 002660 308 FTNPRKP-VILALAR-PDPKKNIT--TLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQ 383 (895)
Q Consensus 308 ~~~~~~~-~il~vgr-l~~~Kgi~--~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~ 383 (895)
...++++ +++..|. ..+.|... ...+.++.+.+ ....+ +++|+..+. +..+++. +... ...
T Consensus 169 ~~~~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~--~~~~i-vl~G~~~e~--------~~~~~i~---~~~~-~~~ 233 (334)
T TIGR02195 169 GLDTERPIIAFCPGAEFGPAKRWPHEHYAELAKRLID--QGYQV-VLFGSAKDH--------PAGNEIE---ALLP-GEL 233 (334)
T ss_pred CCCCCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHH--CCCEE-EEEEChhhH--------HHHHHHH---HhCC-ccc
Confidence 3333444 4556655 34666544 66666666642 23344 455665431 1122332 2211 123
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEc
Q 002660 384 VAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVAT 435 (895)
Q Consensus 384 v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas 435 (895)
+.+.|..+-.++.++++.| |++|-. |+ -.+-=|.|.|+|+|+-
T Consensus 234 ~~l~g~~sL~el~ali~~a----~l~I~~---DS--Gp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 234 RNLAGETSLDEAVDLIALA----KAVVTN---DS--GLMHVAAALNRPLVAL 276 (334)
T ss_pred ccCCCCCCHHHHHHHHHhC----CEEEee---CC--HHHHHHHHcCCCEEEE
Confidence 4477888888999999999 999866 32 3445577899999984
No 359
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=63.71 E-value=13 Score=38.18 Aligned_cols=45 Identities=18% Similarity=0.225 Sum_probs=38.5
Q ss_pred HHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEE
Q 002660 630 ATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFIC 679 (895)
Q Consensus 630 ~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~ 679 (895)
.++++|..|+++ |+.++|+|+++...+...++.+|+. ..++.++|
T Consensus 93 gv~e~L~~L~~~----g~~l~i~T~k~~~~~~~~l~~~gl~-~~F~~i~g 137 (220)
T COG0546 93 GVKELLAALKSA----GYKLGIVTNKPERELDILLKALGLA-DYFDVIVG 137 (220)
T ss_pred CHHHHHHHHHhC----CCeEEEEeCCcHHHHHHHHHHhCCc-cccceEEc
Confidence 578899999998 5999999999999999999999986 35566666
No 360
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=63.70 E-value=3.9 Score=41.44 Aligned_cols=12 Identities=8% Similarity=0.149 Sum_probs=11.3
Q ss_pred eEEEEEecCCCC
Q 002660 613 HIFVISVDCDST 624 (895)
Q Consensus 613 kli~~DiDGTL~ 624 (895)
|+++||+||||+
T Consensus 2 ~~v~FD~DGTL~ 13 (205)
T PRK13582 2 EIVCLDLEGVLV 13 (205)
T ss_pred eEEEEeCCCCCh
Confidence 689999999998
No 361
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=63.12 E-value=35 Score=36.40 Aligned_cols=100 Identities=15% Similarity=0.113 Sum_probs=60.1
Q ss_pred cEEEEEeCCCCCCC--HHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCC
Q 002660 314 PVILALARPDPKKN--ITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHK 391 (895)
Q Consensus 314 ~~il~vgrl~~~Kg--i~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~ 391 (895)
.+++..|.-...|. .+...+.++.+.+. ..++ +++|+.++ .+..+++ .+..+-...+.+.+..+
T Consensus 123 ~i~i~~~~~~~~k~w~~~~~~~l~~~l~~~--~~~i-vl~g~~~e--------~~~~~~i---~~~~~~~~~~~~~~~~~ 188 (279)
T cd03789 123 VVVLPPGASGPAKRWPAERFAALADRLLAR--GARV-VLTGGPAE--------RELAEEI---AAALGGPRVVNLAGKTS 188 (279)
T ss_pred EEEECCCCCCccccCCHHHHHHHHHHHHHC--CCEE-EEEechhh--------HHHHHHH---HHhcCCCccccCcCCCC
Confidence 35556665555554 45777777777532 3444 34555432 1122222 33332223455677777
Q ss_pred CCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcC
Q 002660 392 QSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK 436 (895)
Q Consensus 392 ~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~ 436 (895)
..|+.++++.| |++|-+. + -.+-=|.+.|+|+|+-.
T Consensus 189 l~e~~~li~~~----~l~I~~D---s--g~~HlA~a~~~p~i~l~ 224 (279)
T cd03789 189 LRELAALLARA----DLVVTND---S--GPMHLAAALGTPTVALF 224 (279)
T ss_pred HHHHHHHHHhC----CEEEeeC---C--HHHHHHHHcCCCEEEEE
Confidence 88999999999 9998773 2 34444579999999854
No 362
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=62.96 E-value=27 Score=36.22 Aligned_cols=49 Identities=18% Similarity=0.328 Sum_probs=38.6
Q ss_pred ecCCCChHHHHHHHHHHh---CCCcccEEEEecCCCCCCccccccCcceEEEec
Q 002660 792 IPVLASRSQALRYLYLRW---GVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 842 (895)
Q Consensus 792 ~p~g~sKg~al~~L~~~~---gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMg 842 (895)
-|.+.-||..|+.+.+.. |++-+.++- +||+.| |+-+|++--..-+||.
T Consensus 145 C~~NmCK~~il~~~~~~~~~~g~~~~rviY-iGDG~n-D~Cp~~~L~~~D~v~~ 196 (234)
T PF06888_consen 145 CPPNMCKGKILERLLQEQAQRGVPYDRVIY-IGDGRN-DFCPALRLRPRDVVFP 196 (234)
T ss_pred CCCccchHHHHHHHHHHHhhcCCCcceEEE-ECCCCC-CcCcccccCCCCEEec
Confidence 367778999999998874 777777777 999998 9778887666667774
No 363
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=62.62 E-value=4.6 Score=41.10 Aligned_cols=41 Identities=27% Similarity=0.238 Sum_probs=35.5
Q ss_pred hHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEe
Q 002660 798 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 798 Kg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaM 841 (895)
+...+..+++++|++++++++ +||+.+ | +++-+.+|+.++.
T Consensus 143 ~p~~~~~~~~~~~~~~~~~~~-igDs~~-d-~~aa~~aG~~~i~ 183 (213)
T TIGR01449 143 HPDPLLLAAERLGVAPQQMVY-VGDSRV-D-IQAARAAGCPSVL 183 (213)
T ss_pred ChHHHHHHHHHcCCChhHeEE-eCCCHH-H-HHHHHHCCCeEEE
Confidence 467899999999999999988 888887 8 9999999976653
No 364
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=61.00 E-value=13 Score=42.57 Aligned_cols=32 Identities=31% Similarity=0.239 Sum_probs=27.1
Q ss_pred CCCCchhHHHHHHHHHHhc---------CCCeeEEEEeecCcc
Q 002660 26 SDTGGQVKYVVELARALGS---------MPGVYRVDLLTRQVS 59 (895)
Q Consensus 26 ~~~GG~~~~v~~La~~L~~---------~G~~h~V~v~t~~~~ 59 (895)
-..||.++-+.+.+-.+.. +| |+|.++|.+..
T Consensus 44 ~~~gg~er~~v~~~~~l~s~~~~lg~~d~G--~qV~~l~~h~~ 84 (495)
T KOG0853|consen 44 LGIGGAERLVVDAAVHLLSGQDVLGLPDTG--GQVVYLTSHED 84 (495)
T ss_pred cccCchHHHhHHHHHHHHhcccccCCCCCC--ceEEEEehhhh
Confidence 3578999999998889988 99 99999998753
No 365
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=60.54 E-value=13 Score=37.87 Aligned_cols=47 Identities=15% Similarity=0.130 Sum_probs=37.7
Q ss_pred hHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEE
Q 002660 628 LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFIC 679 (895)
Q Consensus 628 ~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~ 679 (895)
.+.+.++|+.|+++ |+.++|+||.+...+...++.+++. ..+|.+++
T Consensus 84 ~~g~~~~l~~L~~~----g~~~~i~S~~~~~~~~~~l~~~gl~-~~f~~i~~ 130 (214)
T PRK13288 84 YETVYETLKTLKKQ----GYKLGIVTTKMRDTVEMGLKLTGLD-EFFDVVIT 130 (214)
T ss_pred CcCHHHHHHHHHHC----CCeEEEEeCCCHHHHHHHHHHcCCh-hceeEEEe
Confidence 34678899999987 5999999999999999999999985 23455554
No 366
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=59.40 E-value=7.3 Score=39.88 Aligned_cols=41 Identities=15% Similarity=0.061 Sum_probs=30.7
Q ss_pred CCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEec
Q 002660 795 LASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 842 (895)
Q Consensus 795 g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMg 842 (895)
|..|..+++.+. ...+++++ +||+.+ | ++|++.|+..+|=+
T Consensus 142 g~~K~~~l~~~~----~~~~~~i~-iGDg~~-D-~~~a~~Ad~~~ar~ 182 (214)
T TIGR03333 142 GCCKPSLIRKLS----EPNDYHIV-IGDSVT-D-VEAAKQSDLCFARD 182 (214)
T ss_pred CCCHHHHHHHHh----hcCCcEEE-EeCCHH-H-HHHHHhCCeeEehH
Confidence 346888887654 35567777 888888 8 99999999976644
No 367
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=58.42 E-value=69 Score=37.10 Aligned_cols=72 Identities=14% Similarity=0.158 Sum_probs=49.9
Q ss_pred CCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCC-CEEEcCC--CCchhccccCCCeEEeCCCCHHHHHHHHHHH
Q 002660 392 QSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGL-PIVATKN--GGPVDIHRVLDNGLLVDPHDQQSVADALLKL 468 (895)
Q Consensus 392 ~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~-PVvas~~--gg~~eiv~~~~~g~lv~p~d~~~la~ai~~l 468 (895)
...+.+.++.+ -.++.|+-.++..-.++||+.+|| |||.++. ....+.+.-..-++.++ .+++-+.|.+.
T Consensus 334 ~~~y~~~m~~S----~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~~~fSV~v~---~~~v~~~~~~i 406 (464)
T KOG1021|consen 334 PLNYMEGMQDS----KFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDWTEFSVFVP---EKDVPELIKNI 406 (464)
T ss_pred cchHHHHhhcC----eEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCccceEEEEEEE---HHHhhhHHHHH
Confidence 46788899999 899999988888899999999985 9988874 33444443333455554 33444444555
Q ss_pred Hh
Q 002660 469 VA 470 (895)
Q Consensus 469 l~ 470 (895)
|.
T Consensus 407 L~ 408 (464)
T KOG1021|consen 407 LL 408 (464)
T ss_pred HH
Confidence 54
No 368
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=58.34 E-value=19 Score=36.53 Aligned_cols=47 Identities=15% Similarity=0.113 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEc
Q 002660 629 DATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 680 (895)
Q Consensus 629 ~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 680 (895)
+.+.++|+.|+++ |+.++|+|+.+...+..+++.+++. ..+|.++|+
T Consensus 88 ~g~~~~L~~l~~~----g~~~~i~S~~~~~~~~~~l~~~~l~-~~f~~~~~~ 134 (213)
T TIGR01449 88 PGVEATLGALRAK----GLRLGLVTNKPTPLARPLLELLGLA-KYFSVLIGG 134 (213)
T ss_pred CCHHHHHHHHHHC----CCeEEEEeCCCHHHHHHHHHHcCcH-hhCcEEEec
Confidence 3577888888887 5999999999999999999999884 235655553
No 369
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=57.58 E-value=13 Score=37.52 Aligned_cols=39 Identities=13% Similarity=0.188 Sum_probs=33.7
Q ss_pred hHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCC
Q 002660 628 LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 670 (895)
Q Consensus 628 ~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~ 670 (895)
.+.+.++|+.|+++ |+.++|+||.+...+...++.+++.
T Consensus 77 ~~g~~~~L~~L~~~----g~~~~i~Sn~~~~~~~~~l~~~~l~ 115 (205)
T TIGR01454 77 FPGVPELLAELRAD----GVGTAIATGKSGPRARSLLEALGLL 115 (205)
T ss_pred CCCHHHHHHHHHHC----CCeEEEEeCCchHHHHHHHHHcCCh
Confidence 34678889999987 5999999999999999999999884
No 370
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=55.42 E-value=15 Score=37.63 Aligned_cols=48 Identities=13% Similarity=0.016 Sum_probs=38.2
Q ss_pred hHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEc
Q 002660 628 LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 680 (895)
Q Consensus 628 ~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 680 (895)
.+.+.++|+.|+++ |+.++|+|+.+...+...++.+++. ..+|.++++
T Consensus 96 ~~g~~~~L~~L~~~----g~~~~i~Tn~~~~~~~~~l~~~~l~-~~f~~i~~~ 143 (221)
T TIGR02253 96 YPGVRDTLMELRES----GYRLGIITDGLPVKQWEKLERLGVR-DFFDAVITS 143 (221)
T ss_pred CCCHHHHHHHHHHC----CCEEEEEeCCchHHHHHHHHhCChH-HhccEEEEe
Confidence 34678899999987 5999999999988888999999984 245666654
No 371
>PRK09739 hypothetical protein; Provisional
Probab=54.12 E-value=20 Score=36.23 Aligned_cols=40 Identities=13% Similarity=0.021 Sum_probs=28.5
Q ss_pred CcceeEeeeecccccccCcccCCCCCCCCch-hHHHHHHHHHHhcCCCeeEEEEee
Q 002660 1 MIFNNYFACSIHGLIRGENMELGRDSDTGGQ-VKYVVELARALGSMPGVYRVDLLT 55 (895)
Q Consensus 1 ~~~m~I~~is~~~~~~~~~~~~~~~~~~GG~-~~~v~~La~~L~~~G~~h~V~v~t 55 (895)
|+||||++|.-|.. .+|. ...+..+++++.+.| ++|+++-
T Consensus 1 ~~mmkiliI~~sp~-------------~~s~s~~l~~~~~~~~~~~g--~~v~~~d 41 (199)
T PRK09739 1 MQSMRIYLVWAHPR-------------HDSLTAKVAEAIHQRAQERG--HQVEELD 41 (199)
T ss_pred CCCceEEEEEcCCC-------------CCCcHHHHHHHHHHHHHHCC--CEEEEEE
Confidence 88999999985542 2343 345566677788888 8998874
No 372
>PHA02597 30.2 hypothetical protein; Provisional
Probab=54.04 E-value=6.6 Score=39.51 Aligned_cols=39 Identities=13% Similarity=0.110 Sum_probs=29.7
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCc--ceEEE
Q 002660 797 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGV--HKTVI 840 (895)
Q Consensus 797 sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~a--g~gVa 840 (895)
.|-..+.++++++| +++++. +||+-+ | +..=+.+ |+.++
T Consensus 131 ~kp~~~~~a~~~~~--~~~~v~-vgDs~~-d-i~aA~~a~~Gi~~i 171 (197)
T PHA02597 131 SKEKLFIKAKEKYG--DRVVCF-VDDLAH-N-LDAAHEALSQLPVI 171 (197)
T ss_pred ccHHHHHHHHHHhC--CCcEEE-eCCCHH-H-HHHHHHHHcCCcEE
Confidence 46788899999999 455555 888887 7 8888887 87543
No 373
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=53.63 E-value=13 Score=35.88 Aligned_cols=48 Identities=17% Similarity=0.282 Sum_probs=38.8
Q ss_pred hHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEc
Q 002660 628 LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 680 (895)
Q Consensus 628 ~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 680 (895)
.+.+.++|++|+++ |+.++++|+.+...+...++.+++. ..+|.++++
T Consensus 79 ~~~~~~~L~~l~~~----~~~~~i~Sn~~~~~~~~~l~~~~~~-~~f~~i~~~ 126 (176)
T PF13419_consen 79 YPGVRELLERLKAK----GIPLVIVSNGSRERIERVLERLGLD-DYFDEIISS 126 (176)
T ss_dssp STTHHHHHHHHHHT----TSEEEEEESSEHHHHHHHHHHTTHG-GGCSEEEEG
T ss_pred hhhhhhhhhhcccc----cceeEEeecCCcccccccccccccc-ccccccccc
Confidence 34678899999877 5999999999999999999999974 235666654
No 374
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=53.54 E-value=72 Score=33.11 Aligned_cols=103 Identities=12% Similarity=0.111 Sum_probs=57.0
Q ss_pred CCCcEEEEEeCCCCCCCHHH--HHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHH-HHHHhcCCCCcEEeC
Q 002660 311 PRKPVILALARPDPKKNITT--LVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVL-KLIDKYDLYGQVAYP 387 (895)
Q Consensus 311 ~~~~~il~vgrl~~~Kgi~~--ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~-~~~~~~~l~~~v~~~ 387 (895)
.+..+++..|.-.+.|.... ..+.++.+.+. ...+ +++|...+. ..++. ...+... ...+.+.
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~--~~~v-vl~g~~~~~----------~~~~~~~~~~~~~-~~~~~~~ 169 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKER--GYRV-VLLGGPEEQ----------EKEIADQIAAGLQ-NPVINLA 169 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCC--T-EE-EE--SSHHH----------HHHHHHHHHTTHT-TTTEEET
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhh--CceE-EEEccchHH----------HHHHHHHHHHhcc-cceEeec
Confidence 34556777777667777544 66777777532 2344 455654320 11222 2222221 1268888
Q ss_pred CCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcC
Q 002660 388 KHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK 436 (895)
Q Consensus 388 g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~ 436 (895)
+..+..++.++++.| |++|-+ |+ -.+-=|.|.|+|+|+-.
T Consensus 170 ~~~~l~e~~ali~~a----~~~I~~---Dt--g~~HlA~a~~~p~v~lf 209 (247)
T PF01075_consen 170 GKTSLRELAALISRA----DLVIGN---DT--GPMHLAAALGTPTVALF 209 (247)
T ss_dssp TTS-HHHHHHHHHTS----SEEEEE---SS--HHHHHHHHTT--EEEEE
T ss_pred CCCCHHHHHHHHhcC----CEEEec---CC--hHHHHHHHHhCCEEEEe
Confidence 888888999999999 999877 22 44556888999999854
No 375
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=53.41 E-value=39 Score=31.22 Aligned_cols=40 Identities=13% Similarity=0.097 Sum_probs=33.1
Q ss_pred ChHHHHHHHHHHh-CCCcccEEEEecC-CCCCCccccccCcceEE
Q 002660 797 SRSQALRYLYLRW-GVELSKMVVFVGE-SGDTDYEGLLGGVHKTV 839 (895)
Q Consensus 797 sKg~al~~L~~~~-gi~~~~viaf~Gd-~nn~D~~eMl~~ag~gV 839 (895)
.|...++++++++ ++++++++. +|| ... | +.+-+.+|+-.
T Consensus 86 P~~~~~~~~~~~~~~~~~~~~v~-IGD~~~~-D-i~~A~~~Gi~~ 127 (132)
T TIGR01662 86 PKPGMFLEALKRFNEIDPEESVY-VGDQDLT-D-LQAAKRAGLAF 127 (132)
T ss_pred CChHHHHHHHHHcCCCChhheEE-EcCCCcc-c-HHHHHHCCCeE
Confidence 4678999999999 599999988 777 566 7 99988888644
No 376
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=52.32 E-value=19 Score=37.83 Aligned_cols=47 Identities=11% Similarity=0.010 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCC-CEEEEc
Q 002660 629 DATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDF-DAFICN 680 (895)
Q Consensus 629 ~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~-d~~I~~ 680 (895)
+.+.++|+.|+++ |+.++|+||.+...+..+++.+++. ..+ |.+||.
T Consensus 102 pg~~e~L~~L~~~----g~~l~IvT~~~~~~~~~~l~~~gl~-~~f~d~ii~~ 149 (253)
T TIGR01422 102 PGVIEVIAYLRAR----GIKIGSTTGYTREMMDVVAPEAALQ-GYRPDYNVTT 149 (253)
T ss_pred CCHHHHHHHHHHC----CCeEEEECCCcHHHHHHHHHHHHhc-CCCCceEEcc
Confidence 3577888999887 5999999999999999999888873 122 555553
No 377
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=51.85 E-value=9.8 Score=38.49 Aligned_cols=41 Identities=15% Similarity=0.125 Sum_probs=35.3
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEE
Q 002660 797 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVI 840 (895)
Q Consensus 797 sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVa 840 (895)
.|...++.+++++|+++++++. +||+.+ | +++-+.+|+.++
T Consensus 132 P~~~~~~~~~~~~~~~~~~~l~-igD~~~-D-i~aA~~~Gi~~i 172 (205)
T TIGR01454 132 PAPDIVREALRLLDVPPEDAVM-VGDAVT-D-LASARAAGTATV 172 (205)
T ss_pred CChHHHHHHHHHcCCChhheEE-EcCCHH-H-HHHHHHcCCeEE
Confidence 4678889999999999999988 777777 8 999999998654
No 378
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=51.64 E-value=14 Score=39.25 Aligned_cols=38 Identities=16% Similarity=0.264 Sum_probs=31.0
Q ss_pred CCChHHHHH-HHHHHhC--CCcccEEEEecCCCCCCccccccCc
Q 002660 795 LASRSQALR-YLYLRWG--VELSKMVVFVGESGDTDYEGLLGGV 835 (895)
Q Consensus 795 g~sKg~al~-~L~~~~g--i~~~~viaf~Gd~nn~D~~eMl~~a 835 (895)
..+|...+. ..+++++ ++++++|+ +||+-+ | +.|...+
T Consensus 190 ~~~K~~~v~~~~~~~~~~~~~~~~vI~-vGDs~~-D-l~ma~g~ 230 (277)
T TIGR01544 190 TFNKNHDVALRNTEYFNQLKDRSNIIL-LGDSQG-D-LRMADGV 230 (277)
T ss_pred ccccHHHHHHHHHHHhCccCCcceEEE-ECcChh-h-hhHhcCC
Confidence 467887776 6899999 99999999 777777 7 9997666
No 379
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=51.50 E-value=1.3e+02 Score=32.86 Aligned_cols=46 Identities=13% Similarity=-0.021 Sum_probs=35.8
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcC
Q 002660 382 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK 436 (895)
Q Consensus 382 ~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~ 436 (895)
+.+.+.|..+-.++.++++.| |++|-. |+ -.+-=|.|+|+|+|+-.
T Consensus 234 ~~~~l~g~~sL~elaali~~a----~l~I~n---DS--Gp~HlA~A~g~p~valf 279 (322)
T PRK10964 234 PYVEVLPKLSLEQVARVLAGA----KAVVSV---DT--GLSHLTAALDRPNITLY 279 (322)
T ss_pred CcceecCCCCHHHHHHHHHhC----CEEEec---CC--cHHHHHHHhCCCEEEEE
Confidence 346677888888999999999 999866 22 34555889999999954
No 380
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=51.39 E-value=23 Score=35.63 Aligned_cols=39 Identities=15% Similarity=0.186 Sum_probs=30.1
Q ss_pred eeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCccC
Q 002660 4 NNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSA 60 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~~ 60 (895)
||||+-...|+ ....+..|+++|++.| |+|.|+++....
T Consensus 1 M~ILlTNDDGi----------------~a~Gi~aL~~~L~~~g--~~V~VvAP~~~~ 39 (196)
T PF01975_consen 1 MRILLTNDDGI----------------DAPGIRALAKALSALG--HDVVVVAPDSEQ 39 (196)
T ss_dssp SEEEEE-SS-T----------------TSHHHHHHHHHHTTTS--SEEEEEEESSST
T ss_pred CeEEEEcCCCC----------------CCHHHHHHHHHHHhcC--CeEEEEeCCCCC
Confidence 79999887775 2457778999999998 999999987543
No 381
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=51.32 E-value=23 Score=36.36 Aligned_cols=48 Identities=15% Similarity=0.218 Sum_probs=38.6
Q ss_pred hHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEc
Q 002660 628 LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 680 (895)
Q Consensus 628 ~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 680 (895)
.+.+.++++.|+++ |+.++|+|+.+...+..+++.+++. ..+|.++++
T Consensus 94 ~~g~~~~l~~l~~~----g~~~~i~S~~~~~~~~~~l~~~~l~-~~f~~~~~~ 141 (222)
T PRK10826 94 LPGVREALALCKAQ----GLKIGLASASPLHMLEAVLTMFDLR-DYFDALASA 141 (222)
T ss_pred CCCHHHHHHHHHHC----CCeEEEEeCCcHHHHHHHHHhCcch-hcccEEEEc
Confidence 34678889999987 5999999999999999999999985 345655554
No 382
>PRK09449 dUMP phosphatase; Provisional
Probab=51.08 E-value=12 Score=38.37 Aligned_cols=41 Identities=15% Similarity=0.024 Sum_probs=30.8
Q ss_pred hHHHHHHHHHHhCCCc-ccEEEEecCCC-CCCccccccCcceEEEe
Q 002660 798 RSQALRYLYLRWGVEL-SKMVVFVGESG-DTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 798 Kg~al~~L~~~~gi~~-~~viaf~Gd~n-n~D~~eMl~~ag~gVaM 841 (895)
+-.....+++++|+.+ ++++. +||+. + | ++.=+.+|...+.
T Consensus 152 ~p~~~~~~~~~~~~~~~~~~~~-vgD~~~~-D-i~~A~~aG~~~i~ 194 (224)
T PRK09449 152 DVAIFDYALEQMGNPDRSRVLM-VGDNLHS-D-ILGGINAGIDTCW 194 (224)
T ss_pred CHHHHHHHHHHcCCCCcccEEE-EcCCcHH-H-HHHHHHCCCcEEE
Confidence 3467899999999854 67776 78875 5 6 8888888976544
No 383
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=51.02 E-value=11 Score=39.26 Aligned_cols=26 Identities=12% Similarity=0.115 Sum_probs=0.0
Q ss_pred eEEEEEecCCC---CcchhHHHHHHHHHH
Q 002660 613 HIFVISVDCDS---TTGLLDATKKICEAV 638 (895)
Q Consensus 613 kli~~DiDGTL---~~~~~~~~~~~l~~l 638 (895)
|.|+||+|||| ........+++++.+
T Consensus 11 k~iiFDlDGTL~D~~~~~~~a~~~~~~~~ 39 (238)
T PRK10748 11 SALTFDLDDTLYDNRPVILRTEQEALAFV 39 (238)
T ss_pred eeEEEcCcccccCChHHHHHHHHHHHHHH
No 384
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=50.97 E-value=20 Score=39.98 Aligned_cols=47 Identities=9% Similarity=0.129 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEc
Q 002660 629 DATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 680 (895)
Q Consensus 629 ~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 680 (895)
+.++++|+.|+++ |+.++|+|+.+...+...++.+|+. ..+|.+|+.
T Consensus 219 pGa~ElL~~Lk~~----GiklaIaSn~~~~~~~~~L~~lgL~-~yFd~Iv~s 265 (381)
T PLN02575 219 TGSQEFVNVLMNY----KIPMALVSTRPRKTLENAIGSIGIR-GFFSVIVAA 265 (381)
T ss_pred cCHHHHHHHHHHC----CCeEEEEeCCCHHHHHHHHHHcCCH-HHceEEEec
Confidence 4578889999887 5999999999999999999999985 346777664
No 385
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=50.14 E-value=8.5 Score=43.54 Aligned_cols=57 Identities=16% Similarity=0.191 Sum_probs=41.6
Q ss_pred EEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEecCccccccccccccC
Q 002660 789 INVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANR 856 (895)
Q Consensus 789 lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgNa~~~~~~~~~a~~ 856 (895)
-|..|. .|-..|+.--. ....+|..||..| | -+-|..|..|+||.++. ...|+.++.
T Consensus 491 AeatPE--dK~~~I~~eQ~-----~grlVAMtGDGTN-D-APALAqAdVg~AMNsGT--qAAkEAaNM 547 (681)
T COG2216 491 AEATPE--DKLALIRQEQA-----EGRLVAMTGDGTN-D-APALAQADVGVAMNSGT--QAAKEAANM 547 (681)
T ss_pred hcCChH--HHHHHHHHHHh-----cCcEEEEcCCCCC-c-chhhhhcchhhhhcccc--HHHHHhhcc
Confidence 455454 56666665433 2347888999999 9 99999999999999998 445666654
No 386
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=49.54 E-value=22 Score=36.30 Aligned_cols=38 Identities=13% Similarity=0.150 Sum_probs=33.5
Q ss_pred hHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 628 LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 628 ~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
.+.+.++|+.|+++ |+.++|+|+.+...+...++.+++
T Consensus 89 ~~G~~~~L~~L~~~----g~~~~ivT~~~~~~~~~~l~~~~l 126 (220)
T TIGR03351 89 LPGAEEAFRSLRSS----GIKVALTTGFDRDTAERLLEKLGW 126 (220)
T ss_pred CCCHHHHHHHHHHC----CCEEEEEeCCchHHHHHHHHHhhh
Confidence 34578899999987 599999999999999999999887
No 387
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=49.43 E-value=15 Score=37.59 Aligned_cols=41 Identities=12% Similarity=0.085 Sum_probs=32.2
Q ss_pred hHHHHHHHHHHh-CCCcccEEEEecCCC-CCCccccccCcceEEEe
Q 002660 798 RSQALRYLYLRW-GVELSKMVVFVGESG-DTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 798 Kg~al~~L~~~~-gi~~~~viaf~Gd~n-n~D~~eMl~~ag~gVaM 841 (895)
+......+++++ |+++++++. +||+- . | +..=+.+|+..+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~v~-igD~~~~-d-i~~A~~~G~~~i~ 196 (224)
T TIGR02254 154 DKEIFNYALERMPKFSKEEVLM-IGDSLTA-D-IKGGQNAGLDTCW 196 (224)
T ss_pred CHHHHHHHHHHhcCCCchheEE-ECCCcHH-H-HHHHHHCCCcEEE
Confidence 456788999999 999999888 88774 4 6 8888888875444
No 388
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=49.18 E-value=30 Score=35.42 Aligned_cols=47 Identities=13% Similarity=0.134 Sum_probs=37.2
Q ss_pred hHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEE
Q 002660 628 LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFIC 679 (895)
Q Consensus 628 ~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~ 679 (895)
.+.+.++++.+++. |+.++|+||.....+..+++.+++. ..++.+++
T Consensus 95 ~~g~~~~l~~l~~~----g~~~~i~S~~~~~~~~~~l~~~~l~-~~f~~~~~ 141 (226)
T PRK13222 95 YPGVKETLAALKAA----GYPLAVVTNKPTPFVAPLLEALGIA-DYFSVVIG 141 (226)
T ss_pred CCCHHHHHHHHHHC----CCeEEEEeCCCHHHHHHHHHHcCCc-cCccEEEc
Confidence 34678899999887 5999999999999999999999884 23455444
No 389
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=48.50 E-value=25 Score=35.17 Aligned_cols=47 Identities=13% Similarity=0.176 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEc
Q 002660 629 DATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 680 (895)
Q Consensus 629 ~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 680 (895)
+.+.++|++|+++ |+.++|+|+-+...+...++.+|+. ..+|.++++
T Consensus 95 ~~~~~~L~~L~~~----g~~~~i~Sn~~~~~~~~~l~~~gl~-~~fd~i~~s 141 (198)
T TIGR01428 95 PDVPAGLRALKER----GYRLAILSNGSPAMLKSLVKHAGLD-DPFDAVLSA 141 (198)
T ss_pred CCHHHHHHHHHHC----CCeEEEEeCCCHHHHHHHHHHCCCh-hhhheeEeh
Confidence 3567889999987 5999999999999999999999974 235666664
No 390
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=48.49 E-value=77 Score=33.45 Aligned_cols=87 Identities=11% Similarity=0.035 Sum_probs=50.7
Q ss_pred HHHHhcCCCC--cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCC--CCchHHHHHHHcCCCEEEcCCCCchhccccCC
Q 002660 373 KLIDKYDLYG--QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIE--PFGLTLIEAAAHGLPIVATKNGGPVDIHRVLD 448 (895)
Q Consensus 373 ~~~~~~~l~~--~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~E--g~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~ 448 (895)
..+.++|+.+ .+...|.++.+.=.++++.. +.|++|.=-.-+ |+.-++--|..+|+|||.-.-+... .
T Consensus 165 ~~~~~~G~~~~~iia~~gPfs~e~n~al~~~~--~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~~------~ 236 (256)
T TIGR00715 165 AQALKLGFPSDRIIAMRGPFSEELEKALLREY--RIDAVVTKASGEQGGELEKVKAAEALGINVIRIARPQTI------P 236 (256)
T ss_pred HHHHHcCCChhcEEEEeCCCCHHHHHHHHHHc--CCCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCCC------C
Confidence 3566667654 35667777766666777776 225544322212 3334666677889999987665321 1
Q ss_pred CeEEeCCCCHHHHHHHHHHHH
Q 002660 449 NGLLVDPHDQQSVADALLKLV 469 (895)
Q Consensus 449 ~g~lv~p~d~~~la~ai~~ll 469 (895)
....+ .+.+++.+.+.+++
T Consensus 237 ~~~~~--~~~~el~~~l~~~~ 255 (256)
T TIGR00715 237 GVAIF--DDISQLNQFVARLL 255 (256)
T ss_pred CCccC--CCHHHHHHHHHHhc
Confidence 11233 37777777776654
No 391
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=47.98 E-value=11 Score=38.69 Aligned_cols=36 Identities=11% Similarity=0.115 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 629 DATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 629 ~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
+.+.++++.++++ |+.++|+||-....+..+++.+ +
T Consensus 77 pG~~e~l~~l~~~----g~~~~IvS~~~~~~i~~il~~~-~ 112 (219)
T PRK09552 77 EGFHEFVQFVKEN----NIPFYVVSGGMDFFVYPLLQGL-I 112 (219)
T ss_pred cCHHHHHHHHHHc----CCeEEEECCCcHHHHHHHHHHh-C
Confidence 4567888888877 5899999999888888888887 6
No 392
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=47.77 E-value=9.7 Score=37.07 Aligned_cols=44 Identities=14% Similarity=0.109 Sum_probs=36.6
Q ss_pred CChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEec
Q 002660 796 ASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 842 (895)
Q Consensus 796 ~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMg 842 (895)
--|...+..+++++++++++++. +||+.+ | +++-+.+|+..+.=
T Consensus 103 KP~~~~~~~~~~~~~~~~~e~l~-IGD~~~-D-i~~A~~aGi~~i~~ 146 (161)
T TIGR01261 103 KPKIKLLEPYLKKNLIDKARSYV-IGDRET-D-MQLAENLGIRGIQY 146 (161)
T ss_pred CCCHHHHHHHHHHcCCCHHHeEE-EeCCHH-H-HHHHHHCCCeEEEE
Confidence 34667889999999999999998 778777 8 99999999876543
No 393
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=47.20 E-value=31 Score=35.83 Aligned_cols=41 Identities=15% Similarity=0.140 Sum_probs=32.0
Q ss_pred hHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCC
Q 002660 628 LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 670 (895)
Q Consensus 628 ~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~ 670 (895)
.+..+++++.+.++. .|+.++|.|-=.-..+..+|+..|+.
T Consensus 73 ~pgm~~~l~~l~~~~--~~~~~~IiSDaNs~fI~~iL~~~gl~ 113 (234)
T PF06888_consen 73 DPGMKELLRFLAKNQ--RGFDLIIISDANSFFIETILEHHGLR 113 (234)
T ss_pred CccHHHHHHHHHhcC--CCceEEEEeCCcHhHHHHHHHhCCCc
Confidence 345678888885532 47889999988888999999998884
No 394
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=46.86 E-value=19 Score=43.81 Aligned_cols=49 Identities=14% Similarity=0.200 Sum_probs=40.9
Q ss_pred eEEeecCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEecCcc
Q 002660 788 RINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGIC 845 (895)
Q Consensus 788 ~lEI~p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgNa~ 845 (895)
+-|++|. .|..=|+.|.+.- ..+|++||+-| | -+-|..|..|||||++.
T Consensus 766 ~aev~P~--~K~~~Ik~lq~~~-----~~VaMVGDGIN-D-aPALA~AdVGIaig~gs 814 (951)
T KOG0207|consen 766 YAEVLPE--QKAEKIKEIQKNG-----GPVAMVGDGIN-D-APALAQADVGIAIGAGS 814 (951)
T ss_pred EeccCch--hhHHHHHHHHhcC-----CcEEEEeCCCC-c-cHHHHhhccceeecccc
Confidence 5677776 6888888887753 35677999999 9 99999999999999987
No 395
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=46.15 E-value=21 Score=35.11 Aligned_cols=46 Identities=22% Similarity=0.289 Sum_probs=34.3
Q ss_pred hhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEE
Q 002660 627 LLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFIC 679 (895)
Q Consensus 627 ~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~ 679 (895)
+.+.+.++|+.|+++ |+.++|+|+. ..+...++.+++. ..+|.+++
T Consensus 89 ~~~g~~~~l~~l~~~----g~~i~i~S~~--~~~~~~l~~~~l~-~~f~~v~~ 134 (185)
T TIGR02009 89 VLPGIENFLKRLKKK----GIAVGLGSSS--KNADRILAKLGLT-DYFDAIVD 134 (185)
T ss_pred CCcCHHHHHHHHHHc----CCeEEEEeCc--hhHHHHHHHcChH-HHCCEeee
Confidence 344678889999887 5999999998 6677888888874 23455554
No 396
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=46.01 E-value=31 Score=32.85 Aligned_cols=42 Identities=19% Similarity=0.207 Sum_probs=34.2
Q ss_pred CChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEE
Q 002660 796 ASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVI 840 (895)
Q Consensus 796 ~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVa 840 (895)
=-|...++.+++.+|+++++++. +||+.. | +++=+.+|+..+
T Consensus 101 KP~~~~~~~~~~~~~~~~~e~i~-IGDs~~-D-i~~A~~~Gi~~v 142 (147)
T TIGR01656 101 KPKPGLILEALKRLGVDASRSLV-VGDRLR-D-LQAARNAGLAAV 142 (147)
T ss_pred CCCHHHHHHHHHHcCCChHHEEE-EcCCHH-H-HHHHHHCCCCEE
Confidence 35777899999999999999988 777766 7 888788886544
No 397
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=45.12 E-value=1.1e+02 Score=33.60 Aligned_cols=103 Identities=12% Similarity=0.088 Sum_probs=60.3
Q ss_pred CcEEEEEeCCCCCCCH--HHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCC
Q 002660 313 KPVILALARPDPKKNI--TTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHH 390 (895)
Q Consensus 313 ~~~il~vgrl~~~Kgi--~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~ 390 (895)
..+++..|.-.+.|.. +...+.++.+.. ....+ +++|+..+. ..+..+++ .+..+-...+.+.|..
T Consensus 182 ~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~--~~~~i-vl~g~p~~~------e~~~~~~i---~~~~~~~~~~~l~g~~ 249 (344)
T TIGR02201 182 NYIVIQPTSRWFFKCWDNDRFSALIDALHA--RGYEV-VLTSGPDKD------ELAMVNEI---AQGCQTPRVTSLAGKL 249 (344)
T ss_pred CEEEEeCCCCccccCCCHHHHHHHHHHHHh--CCCeE-EEecCCCHH------HHHHHHHH---HhhCCCCcccccCCCC
Confidence 4456666665556654 455555555542 23444 455643210 01112222 2222222345578888
Q ss_pred CCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcC
Q 002660 391 KQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK 436 (895)
Q Consensus 391 ~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~ 436 (895)
+-.++.++++.| +++|-. |+ ..+-=|.|.|+|+|+=.
T Consensus 250 sL~el~ali~~a----~l~Vs~---DS--Gp~HlAaA~g~p~v~Lf 286 (344)
T TIGR02201 250 TLPQLAALIDHA----RLFIGV---DS--VPMHMAAALGTPLVALF 286 (344)
T ss_pred CHHHHHHHHHhC----CEEEec---CC--HHHHHHHHcCCCEEEEE
Confidence 889999999999 998866 33 34555888999999843
No 398
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=43.92 E-value=31 Score=36.79 Aligned_cols=47 Identities=13% Similarity=0.124 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEc
Q 002660 629 DATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 680 (895)
Q Consensus 629 ~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 680 (895)
+.+.++|+.|+++ |+.++|+||.+...+...++.+++. ..++.++|.
T Consensus 104 ~g~~e~L~~Lk~~----g~~l~ivTn~~~~~~~~~l~~~~i~-~~f~~i~~~ 150 (272)
T PRK13223 104 PGVRDTLKWLKKQ----GVEMALITNKPERFVAPLLDQMKIG-RYFRWIIGG 150 (272)
T ss_pred CCHHHHHHHHHHC----CCeEEEEECCcHHHHHHHHHHcCcH-hhCeEEEec
Confidence 4577888888887 5999999999999899999988874 234555554
No 399
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=43.87 E-value=13 Score=38.01 Aligned_cols=40 Identities=13% Similarity=0.091 Sum_probs=34.8
Q ss_pred hHHHHHHHHHHhCCC-cccEEEEecCCCCCCccccccCcceEEE
Q 002660 798 RSQALRYLYLRWGVE-LSKMVVFVGESGDTDYEGLLGGVHKTVI 840 (895)
Q Consensus 798 Kg~al~~L~~~~gi~-~~~viaf~Gd~nn~D~~eMl~~ag~gVa 840 (895)
+...+..+++++|++ ++++++ +||+.. | +++=+.+|+.++
T Consensus 147 ~p~~~~~a~~~~~~~~~~~~~~-igD~~~-D-i~aa~~aG~~~~ 187 (220)
T TIGR03351 147 APDLILRAMELTGVQDVQSVAV-AGDTPN-D-LEAGINAGAGAV 187 (220)
T ss_pred CHHHHHHHHHHcCCCChhHeEE-eCCCHH-H-HHHHHHCCCCeE
Confidence 668899999999997 789888 778777 8 999999999873
No 400
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=43.67 E-value=27 Score=35.35 Aligned_cols=51 Identities=22% Similarity=0.313 Sum_probs=42.8
Q ss_pred EeecCCCChHHHHHHHHHHh---CCCcccEEEEecCCCCCCccccccCcceEEEec
Q 002660 790 NVIPVLASRSQALRYLYLRW---GVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 842 (895)
Q Consensus 790 EI~p~g~sKg~al~~L~~~~---gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMg 842 (895)
..-|++--||.-+..+.... |+.-+.++- .||++| |+-+|+...+.-|||.
T Consensus 156 ~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iY-vGDG~n-D~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 156 NLCPSNMCKGLVLDELVASQLKDGVRYERLIY-VGDGAN-DFCPVLRLRACDVAMP 209 (256)
T ss_pred CcCchhhhhhHHHHHHHHHHhhcCCceeeEEE-EcCCCC-CcCcchhcccCceecc
Confidence 55889999999997775544 777778877 899999 9899999999999994
No 401
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=43.49 E-value=33 Score=36.60 Aligned_cols=47 Identities=17% Similarity=0.210 Sum_probs=37.2
Q ss_pred hHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEE
Q 002660 628 LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFIC 679 (895)
Q Consensus 628 ~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~ 679 (895)
.+.+.++|+.|+++ |+.++|+|+.+...+...++.+|+. ..+|.+++
T Consensus 144 ~pg~~e~L~~L~~~----gi~laIvSn~~~~~~~~~L~~~gl~-~~F~~vi~ 190 (273)
T PRK13225 144 FPGVADLLAQLRSR----SLCLGILSSNSRQNIEAFLQRQGLR-SLFSVVQA 190 (273)
T ss_pred CCCHHHHHHHHHHC----CCeEEEEeCCCHHHHHHHHHHcCCh-hheEEEEe
Confidence 34678899999887 5999999999999999999999984 23344433
No 402
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=42.96 E-value=24 Score=36.10 Aligned_cols=44 Identities=9% Similarity=-0.046 Sum_probs=36.8
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEecC
Q 002660 797 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKG 843 (895)
Q Consensus 797 sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgN 843 (895)
-+...+...++++|+++++++. +||+.. | ++.=+.+|..++.-+
T Consensus 143 P~p~~~~~a~~~~~~~p~~~l~-igDs~~-d-i~aA~~aG~~~i~~~ 186 (221)
T PRK10563 143 PDPALMFHAAEAMNVNVENCIL-VDDSSA-G-AQSGIAAGMEVFYFC 186 (221)
T ss_pred CChHHHHHHHHHcCCCHHHeEE-EeCcHh-h-HHHHHHCCCEEEEEC
Confidence 3578889999999999999988 778877 8 998888998887543
No 403
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=42.79 E-value=20 Score=45.52 Aligned_cols=40 Identities=15% Similarity=0.060 Sum_probs=32.3
Q ss_pred chhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 626 GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 626 ~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
+..+...+.|++|+++ |+++-+.||=-.+.+..+.-..++
T Consensus 651 kLQdgVPetI~~L~~A----GIKIWVLTGDK~ETAiNIg~sC~L 690 (1151)
T KOG0206|consen 651 KLQDGVPETIAKLAQA----GIKIWVLTGDKQETAINIGYSCRL 690 (1151)
T ss_pred hhccCchHHHHHHHHc----CCEEEEEcCcHHHHHHHHHHhhcC
Confidence 4455566778888888 699999999999999888777665
No 404
>PRK00207 sulfur transfer complex subunit TusD; Validated
Probab=41.83 E-value=38 Score=31.53 Aligned_cols=39 Identities=15% Similarity=0.026 Sum_probs=29.3
Q ss_pred eeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeE-EEEeec
Q 002660 4 NNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYR-VDLLTR 56 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~-V~v~t~ 56 (895)
|||+++-.++ |+.+-..+..+++|+++.+.| |+ |.||--
T Consensus 1 m~~~iv~~~~------------Py~~~~~~~al~~A~aa~~~g--h~v~~vFf~ 40 (128)
T PRK00207 1 MRYAIAVTGP------------AYGTQQASSAYQFAQALLAEG--HELVSVFFY 40 (128)
T ss_pred CEEEEEEcCC------------CCCCHHHHHHHHHHHHHHhCC--CCeeEEEEe
Confidence 6888775333 565566688999999999999 98 477743
No 405
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=41.68 E-value=40 Score=32.96 Aligned_cols=47 Identities=19% Similarity=0.186 Sum_probs=35.2
Q ss_pred hHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEc
Q 002660 628 LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 680 (895)
Q Consensus 628 ~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 680 (895)
.+.+.+++++|+++ |+.++|+|+-+... ......+++. ..+|.+|++
T Consensus 87 ~~g~~~~l~~l~~~----g~~~~i~Tn~~~~~-~~~~~~~~l~-~~f~~i~~~ 133 (183)
T TIGR01509 87 LPGVEPLLEALRAR----GKKLALLTNSPRDH-AVLVQELGLR-DLFDVVIFS 133 (183)
T ss_pred CcCHHHHHHHHHHC----CCeEEEEeCCchHH-HHHHHhcCCH-HHCCEEEEc
Confidence 34678899999887 59999999998887 5555557774 346777764
No 406
>COG1887 TagB Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [Cell envelope biogenesis, outer membrane]
Probab=40.81 E-value=5.3e+02 Score=29.06 Aligned_cols=99 Identities=13% Similarity=0.134 Sum_probs=60.6
Q ss_pred CCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcCC-C--------CchhccccCCCeEEeCCCCHHHHH
Q 002660 392 QSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN-G--------GPVDIHRVLDNGLLVDPHDQQSVA 462 (895)
Q Consensus 392 ~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~~-g--------g~~eiv~~~~~g~lv~p~d~~~la 462 (895)
..++..+|..+ |++|- -++-+..|+|..-+|||--.. + -..+. ....-|-++. +..++.
T Consensus 277 ~~di~dll~~s----DiLIT-----DySSv~fdf~~l~KPiify~~D~~~y~~~rg~~~d~-~~~~Pg~~~~--~~~~li 344 (388)
T COG1887 277 NADINDLLLVS----DILIT-----DYSSVIFDFMLLDKPIIFYTYDLEQYDELRGFYLDY-KFEAPGEVVE--TQEELI 344 (388)
T ss_pred chhHHHHHhhh----CEEEe-----echHHHHHHHHhcCcEEEEecChHHHHhhhhhhhhH-HhcCCccccc--cHHHHH
Confidence 47999999999 99873 478999999999999997421 1 11111 1122344443 678899
Q ss_pred HHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Q 002660 463 DALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRI 502 (895)
Q Consensus 463 ~ai~~ll~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~ 502 (895)
++|.....+++......+.-.+....+.-....+++.+.+
T Consensus 345 ~ai~~~~~~~~~~~~k~~~~~~~~~~~~dg~ss~ri~~~i 384 (388)
T COG1887 345 DAIKPYDEDGNYDLEKLRVFNDKFNSYEDGRSSERILKLI 384 (388)
T ss_pred HHHHhhhcccchhHHHHHHHHHhhcccccccHHHHHHHHH
Confidence 9998888755443333333333332333344555555544
No 407
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=40.78 E-value=29 Score=35.03 Aligned_cols=35 Identities=26% Similarity=0.340 Sum_probs=28.5
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCc
Q 002660 797 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGV 835 (895)
Q Consensus 797 sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~a 835 (895)
-|+.-++-+|+.-++|-. +++ .||+-. | .+||+.+
T Consensus 191 ~ka~i~e~~~ele~~d~s-a~~-VGDSIt-D-v~ml~~~ 225 (315)
T COG4030 191 EKAKIMEGYCELEGIDFS-AVV-VGDSIT-D-VKMLEAA 225 (315)
T ss_pred chhHHHHHHHhhcCCCcc-eeE-ecCccc-c-hHHHHHh
Confidence 467777899998888877 555 888887 9 9999987
No 408
>cd07944 DRE_TIM_HOA_like 4-hydroxy-2-oxovalerate aldolase-like, N-terminal catalytic TIM barrel domain. This family of bacterial enzymes is sequence-similar to 4-hydroxy-2-oxovalerate aldolase (HOA) but its exact function is unknown. This family includes the Bacteroides vulgatus Bvu_2661 protein and belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues t
Probab=40.14 E-value=4.8e+02 Score=27.64 Aligned_cols=126 Identities=16% Similarity=0.105 Sum_probs=76.3
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEE-EE-ecCCCccccccchHHHHHHHHHHHHhcCCCCcEEe---CCCCCCCCHHHH
Q 002660 324 PKKNITTLVKAFGECRPLRELANLTL-IM-GNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAY---PKHHKQSDVPEI 398 (895)
Q Consensus 324 ~~Kgi~~ll~A~~~l~~~~~~~~l~l-iv-G~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~---~g~~~~~el~~l 398 (895)
+.+.++.++++++..+++ ...+.+ +. ..+. ..+.+.++.+.+.+.+. ..+.+ .|...++++..+
T Consensus 104 ~~~~~~~~~~~i~~ak~~--G~~v~~~~~~a~~~--------~~~~~~~~~~~~~~~g~-~~i~l~DT~G~~~P~~v~~l 172 (266)
T cd07944 104 HKHEFDEALPLIKAIKEK--GYEVFFNLMAISGY--------SDEELLELLELVNEIKP-DVFYIVDSFGSMYPEDIKRI 172 (266)
T ss_pred ccccHHHHHHHHHHHHHC--CCeEEEEEEeecCC--------CHHHHHHHHHHHHhCCC-CEEEEecCCCCCCHHHHHHH
Confidence 446788888888887542 223332 11 2221 23445555566666664 35655 677778888888
Q ss_pred HHHhhcCCc--EEEecCCCCCCchH---HHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHH
Q 002660 399 YRLAAKTKG--VFINPAFIEPFGLT---LIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLV 469 (895)
Q Consensus 399 y~~A~~~~d--v~v~ps~~Eg~gl~---~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll 469 (895)
++......+ +-+--..+..+|+. .++|+.+|.=.|-+..+|..+- .|-. ..++++..+....
T Consensus 173 v~~l~~~~~~~~~i~~H~Hn~~Gla~AN~laA~~aGa~~vd~s~~G~G~~-----aGN~----~~E~~v~~l~~~~ 239 (266)
T cd07944 173 ISLLRSNLDKDIKLGFHAHNNLQLALANTLEAIELGVEIIDATVYGMGRG-----AGNL----PTELLLDYLNNKF 239 (266)
T ss_pred HHHHHHhcCCCceEEEEeCCCccHHHHHHHHHHHcCCCEEEEecccCCCC-----cCcH----HHHHHHHHHHHhh
Confidence 887643323 32322335666665 5788899999999888887762 2321 4577777776653
No 409
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=40.11 E-value=22 Score=37.81 Aligned_cols=59 Identities=10% Similarity=0.060 Sum_probs=38.7
Q ss_pred CeEEEEEecCCC--CcchhHHHHHHHHHHHhhccCCCeEEEEEc--CCCHHH--HHHHHHhCCCC
Q 002660 612 KHIFVISVDCDS--TTGLLDATKKICEAVEKERTEGSIGFILST--SMTISE--IHSFLVSGHLS 670 (895)
Q Consensus 612 ~kli~~DiDGTL--~~~~~~~~~~~l~~l~~~g~~~g~~v~iaT--GR~~~~--~~~~l~~l~l~ 670 (895)
.--|+|||||.| -+.+.+...++++.|.++.++-.+.|++.| |-..+. ++++-+.|++.
T Consensus 35 ~fgfafDIDGVL~RG~~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS~~Lgv~ 99 (389)
T KOG1618|consen 35 TFGFAFDIDGVLFRGHRPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQELSALLGVE 99 (389)
T ss_pred ceeEEEecccEEEecCCCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHHHHhhCCc
Confidence 446899999999 356667788899999887423345566665 333332 34555667764
No 410
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=40.07 E-value=22 Score=41.68 Aligned_cols=39 Identities=15% Similarity=0.305 Sum_probs=28.4
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEec
Q 002660 797 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 842 (895)
Q Consensus 797 sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMg 842 (895)
.|..-++.+.+. | ..+++.||.-| | ..||+.++.||+|+
T Consensus 394 ~K~~~v~~l~~~-g----~~v~~vGDg~n-D-~~al~~Advgia~~ 432 (499)
T TIGR01494 394 EKAALVEALQKK-G----RVVAMTGDGVN-D-APALKKADVGIAMG 432 (499)
T ss_pred HHHHHHHHHHHC-C----CEEEEECCChh-h-HHHHHhCCCccccc
Confidence 355555555322 2 34566999989 9 99999999999998
No 411
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=38.90 E-value=61 Score=33.44 Aligned_cols=47 Identities=11% Similarity=0.000 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEc
Q 002660 629 DATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 680 (895)
Q Consensus 629 ~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 680 (895)
+.+.++++.|+++ |+.++|+|+.+...+...++.+++. ..+|.+++.
T Consensus 98 pg~~~~L~~L~~~----g~~l~i~Tn~~~~~~~~~l~~~~l~-~~f~~i~~~ 144 (229)
T PRK13226 98 DGVEGMLQRLECA----GCVWGIVTNKPEYLARLILPQLGWE-QRCAVLIGG 144 (229)
T ss_pred CCHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCch-hcccEEEec
Confidence 3567888888887 5999999999998888899998874 234555553
No 412
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=38.02 E-value=93 Score=33.50 Aligned_cols=100 Identities=11% Similarity=0.063 Sum_probs=51.9
Q ss_pred CCHHHHHHHHHhcccccCCC-cEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhc
Q 002660 326 KNITTLVKAFGECRPLRELA-NLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAK 404 (895)
Q Consensus 326 Kgi~~ll~A~~~l~~~~~~~-~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~ 404 (895)
.-+...++.+.++ .|.. ++-++...... ......+.+.+.++++++. +....--+.+++...++....
T Consensus 115 ~~~~~~l~l~~~l---~P~~k~igvl~~~~~~------~~~~~~~~~~~~a~~~g~~--l~~~~v~~~~~~~~~~~~l~~ 183 (294)
T PF04392_consen 115 PPIEKQLELIKKL---FPDAKRIGVLYDPSEP------NSVAQIEQLRKAAKKLGIE--LVEIPVPSSEDLEQALEALAE 183 (294)
T ss_dssp --HHHHHHHHHHH---STT--EEEEEEETT-H------HHHHHHHHHHHHHHHTT-E--EEEEEESSGGGHHHHHHHHCT
T ss_pred cCHHHHHHHHHHh---CCCCCEEEEEecCCCc------cHHHHHHHHHHHHHHcCCE--EEEEecCcHhHHHHHHHHhhc
Confidence 3455666666665 3332 33334443321 1234566777778888774 222222346788888887767
Q ss_pred CCcEEEecCC---CCCCchHHHHHHHcCCCEEEcC
Q 002660 405 TKGVFINPAF---IEPFGLTLIEAAAHGLPIVATK 436 (895)
Q Consensus 405 ~~dv~v~ps~---~Eg~gl~~~Ea~a~G~PVvas~ 436 (895)
..|++++++. .+.+...+..+..+++||++..
T Consensus 184 ~~da~~~~~~~~~~~~~~~i~~~~~~~~iPv~~~~ 218 (294)
T PF04392_consen 184 KVDALYLLPDNLVDSNFEAILQLANEAKIPVFGSS 218 (294)
T ss_dssp T-SEEEE-S-HHHHHTHHHHHHHCCCTT--EEESS
T ss_pred cCCEEEEECCcchHhHHHHHHHHHHhcCCCEEECC
Confidence 7798887753 2223333445556799999975
No 413
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=37.89 E-value=46 Score=35.30 Aligned_cols=37 Identities=11% Similarity=0.039 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 629 DATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 629 ~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
+.+.++|+.|+++ |+.++|+||.+...+..+++.+++
T Consensus 104 pg~~elL~~L~~~----g~~l~I~T~~~~~~~~~~l~~~~l 140 (267)
T PRK13478 104 PGVLEVIAALRAR----GIKIGSTTGYTREMMDVVVPLAAA 140 (267)
T ss_pred CCHHHHHHHHHHC----CCEEEEEcCCcHHHHHHHHHHHhh
Confidence 3567888999887 599999999999999888887665
No 414
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=37.23 E-value=87 Score=30.53 Aligned_cols=33 Identities=6% Similarity=0.125 Sum_probs=22.0
Q ss_pred hhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHH
Q 002660 627 LLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSF 663 (895)
Q Consensus 627 ~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~ 663 (895)
+.+..+++|..-++. |-.++..|||+...+...
T Consensus 115 PKevA~qLI~MHq~R----GD~i~FvTGRt~gk~d~v 147 (237)
T COG3700 115 PKEVARQLIDMHQRR----GDAIYFVTGRTPGKTDTV 147 (237)
T ss_pred hHHHHHHHHHHHHhc----CCeEEEEecCCCCccccc
Confidence 345566666654444 678889999998765443
No 415
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=37.16 E-value=42 Score=34.53 Aligned_cols=47 Identities=19% Similarity=0.182 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEc
Q 002660 629 DATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 680 (895)
Q Consensus 629 ~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 680 (895)
+.+.++|+.|+++ |+.++|+|.-+...+...++.+++. ..+|.++|+
T Consensus 96 ~g~~e~L~~Lk~~----g~~~~i~Tn~~~~~~~~~l~~~~l~-~~fd~iv~s 142 (224)
T PRK14988 96 EDTVPFLEALKAS----GKRRILLTNAHPHNLAVKLEHTGLD-AHLDLLLST 142 (224)
T ss_pred CCHHHHHHHHHhC----CCeEEEEeCcCHHHHHHHHHHCCcH-HHCCEEEEe
Confidence 4577889999987 5999999998888888888888874 235666654
No 416
>PRK11590 hypothetical protein; Provisional
Probab=37.11 E-value=57 Score=33.17 Aligned_cols=46 Identities=7% Similarity=-0.045 Sum_probs=33.9
Q ss_pred HHHHHHH-HHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEcC
Q 002660 630 ATKKICE-AVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNS 681 (895)
Q Consensus 630 ~~~~~l~-~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~n 681 (895)
...+.|+ .+++. |+.++|+|+.+...+.++++.+++. ..|.+||..
T Consensus 99 ga~e~L~~~l~~~----G~~l~IvSas~~~~~~~il~~l~~~--~~~~~i~t~ 145 (211)
T PRK11590 99 VVQERLTTYLLSS----DADVWLITGSPQPLVEQVYFDTPWL--PRVNLIASQ 145 (211)
T ss_pred cHHHHHHHHHHhC----CCEEEEEeCCcHHHHHHHHHHcccc--ccCceEEEE
Confidence 4667774 45554 6999999999999999999998851 125677643
No 417
>COG2120 Uncharacterized proteins, LmbE homologs [Function unknown]
Probab=35.74 E-value=85 Score=32.70 Aligned_cols=39 Identities=13% Similarity=0.026 Sum_probs=26.7
Q ss_pred ceeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCc
Q 002660 3 FNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQV 58 (895)
Q Consensus 3 ~m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~ 58 (895)
.++|++|..|-- |...|... ....|+++| ++|.++|...
T Consensus 10 ~~~vL~v~aHPD----------De~~g~gg-----tla~~~~~G--~~V~v~~lT~ 48 (237)
T COG2120 10 PLRVLVVFAHPD----------DEEIGCGG-----TLAKLAARG--VEVTVVCLTL 48 (237)
T ss_pred CCcEEEEecCCc----------chhhccHH-----HHHHHHHCC--CeEEEEEccC
Confidence 478999999996 33333333 233557789 9999998754
No 418
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=35.12 E-value=21 Score=35.22 Aligned_cols=40 Identities=8% Similarity=-0.007 Sum_probs=34.0
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEE
Q 002660 797 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTV 839 (895)
Q Consensus 797 sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gV 839 (895)
-+-..++..++++++++++++. +||+.+ | +.+=+.+|..+
T Consensus 142 p~p~~~~~~~~~~~~~~~~~v~-vgD~~~-d-i~aA~~aG~~~ 181 (185)
T TIGR01990 142 PDPEIFLAAAEGLGVSPSECIG-IEDAQA-G-IEAIKAAGMFA 181 (185)
T ss_pred CChHHHHHHHHHcCCCHHHeEE-EecCHH-H-HHHHHHcCCEE
Confidence 4677889999999999999999 777777 8 99888888654
No 419
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=35.04 E-value=77 Score=37.16 Aligned_cols=54 Identities=11% Similarity=0.122 Sum_probs=46.1
Q ss_pred CeEEEEEecCCC------CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 612 KHIFVISVDCDS------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 612 ~kli~~DiDGTL------~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
.+.+++.+|+++ .....+.+.+++++|++. |+.+++.||.+...+..+.+++|+
T Consensus 327 ~~~~~~a~~~~~~g~i~l~d~lr~~~~~~i~~l~~~----gi~~~~ltGD~~~~a~~ia~~lgi 386 (499)
T TIGR01494 327 LRVLAVASKETLLGLLGLEDPLRDDAKETISELREA----GIRVIMLTGDNVLTAKAIAKELGI 386 (499)
T ss_pred CEEEEEEECCeEEEEEEecCCCchhHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHcCc
Confidence 356777788887 367788899999999997 589999999999999999999875
No 420
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=34.97 E-value=69 Score=32.63 Aligned_cols=39 Identities=8% Similarity=0.025 Sum_probs=32.7
Q ss_pred hhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 627 LLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 627 ~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
+.+.+.++++.++++ |+.++|+||.....+.++++.++.
T Consensus 71 l~pg~~e~l~~l~~~----g~~~~IvS~~~~~~i~~il~~~~~ 109 (214)
T TIGR03333 71 IREGFREFVAFINEH----GIPFYVISGGMDFFVYPLLEGIVE 109 (214)
T ss_pred ccccHHHHHHHHHHC----CCeEEEECCCcHHHHHHHHHhhCC
Confidence 345678899999887 699999999999999999988743
No 421
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=34.83 E-value=57 Score=37.78 Aligned_cols=46 Identities=7% Similarity=0.067 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEE
Q 002660 629 DATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFIC 679 (895)
Q Consensus 629 ~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~ 679 (895)
+.+.++|+.|+++ |+.++|+|+.+...+...++.+++. ..+|.++|
T Consensus 333 pG~~e~L~~Lk~~----g~~l~IvS~~~~~~~~~~l~~~~l~-~~f~~i~~ 378 (459)
T PRK06698 333 PNVKEIFTYIKEN----NCSIYIASNGLTEYLRAIVSYYDLD-QWVTETFS 378 (459)
T ss_pred CCHHHHHHHHHHC----CCeEEEEeCCchHHHHHHHHHCCcH-hhcceeEe
Confidence 4678889999887 5999999999999999999999884 23455554
No 422
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=34.28 E-value=1.6e+02 Score=32.47 Aligned_cols=103 Identities=11% Similarity=0.047 Sum_probs=57.5
Q ss_pred CcEEEEEeCC-CCCCCHH--HHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCC
Q 002660 313 KPVILALARP-DPKKNIT--TLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKH 389 (895)
Q Consensus 313 ~~~il~vgrl-~~~Kgi~--~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~ 389 (895)
..+++..|.- .+.|... ...+.++.+. .....+ +++|+..+ .+...++......-.....+.+.|.
T Consensus 181 ~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~--~~~~~v-vl~Gg~~e--------~~~~~~i~~~~~~~~~~~~~~l~g~ 249 (348)
T PRK10916 181 PIIGFCPGAEFGPAKRWPHYHYAELAQQLI--DEGYQV-VLFGSAKD--------HEAGNEILAALNTEQQAWCRNLAGE 249 (348)
T ss_pred CEEEEeCCCCCccccCCCHHHHHHHHHHHH--HCCCeE-EEEeCHHh--------HHHHHHHHHhcccccccceeeccCC
Confidence 3455666653 3566543 4555555553 223344 35565432 1222333222111000112556788
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEc
Q 002660 390 HKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVAT 435 (895)
Q Consensus 390 ~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas 435 (895)
.+-.++.++++.| +++|-. |+ -.+-=|.|.|+|+|+-
T Consensus 250 ~sL~el~ali~~a----~l~I~n---DT--Gp~HlAaA~g~P~val 286 (348)
T PRK10916 250 TQLEQAVILIAAC----KAIVTN---DS--GLMHVAAALNRPLVAL 286 (348)
T ss_pred CCHHHHHHHHHhC----CEEEec---CC--hHHHHHHHhCCCEEEE
Confidence 8888999999999 998865 33 3344578889999984
No 423
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=34.03 E-value=75 Score=35.05 Aligned_cols=37 Identities=5% Similarity=-0.140 Sum_probs=32.7
Q ss_pred hHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhC-C
Q 002660 628 LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSG-H 668 (895)
Q Consensus 628 ~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l-~ 668 (895)
.+.+.++|++|+++ |++++|+|.-+...+..+++.+ +
T Consensus 186 ~pgl~elL~~Lr~~----G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 186 DPKLPLFLSKLKEH----GKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred chhHHHHHHHHHHC----CCeEEEEeCCCHHHHHHHHHHhhC
Confidence 55788999999987 5999999999999999999886 5
No 424
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=33.66 E-value=25 Score=34.78 Aligned_cols=38 Identities=21% Similarity=0.146 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEE
Q 002660 799 SQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTV 839 (895)
Q Consensus 799 g~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gV 839 (895)
...+..+++++|+++++++. +||+.+ | +.+-+.+|..+
T Consensus 106 p~~~~~~~~~l~~~~~~~~~-VgDs~~-D-i~~A~~aG~~~ 143 (181)
T PRK08942 106 PGMLLSIAERLNIDLAGSPM-VGDSLR-D-LQAAAAAGVTP 143 (181)
T ss_pred HHHHHHHHHHcCCChhhEEE-EeCCHH-H-HHHHHHCCCeE
Confidence 57788999999999999999 777777 8 99999999753
No 425
>PRK06756 flavodoxin; Provisional
Probab=33.62 E-value=57 Score=30.98 Aligned_cols=28 Identities=11% Similarity=0.228 Sum_probs=24.0
Q ss_pred CCCCchhHHHHHHHHHHhcCCCeeEEEEee
Q 002660 26 SDTGGQVKYVVELARALGSMPGVYRVDLLT 55 (895)
Q Consensus 26 ~~~GG~~~~v~~La~~L~~~G~~h~V~v~t 55 (895)
..+|-.+..+..++++|.+.| ++|.++-
T Consensus 10 S~tGnTe~vA~~ia~~l~~~g--~~v~~~~ 37 (148)
T PRK06756 10 SMSGNTEEMADHIAGVIRETE--NEIEVID 37 (148)
T ss_pred CCCchHHHHHHHHHHHHhhcC--CeEEEee
Confidence 467889999999999999998 8888764
No 426
>PRK11587 putative phosphatase; Provisional
Probab=33.51 E-value=61 Score=33.05 Aligned_cols=45 Identities=13% Similarity=0.152 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEE
Q 002660 629 DATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFIC 679 (895)
Q Consensus 629 ~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~ 679 (895)
+.+.++|+.|+++ |+.++|+|+.+...+...++..++. .++.++|
T Consensus 86 pg~~e~L~~L~~~----g~~~~ivTn~~~~~~~~~l~~~~l~--~~~~i~~ 130 (218)
T PRK11587 86 PGAIALLNHLNKL----GIPWAIVTSGSVPVASARHKAAGLP--APEVFVT 130 (218)
T ss_pred cCHHHHHHHHHHc----CCcEEEEcCCCchHHHHHHHhcCCC--CccEEEE
Confidence 4578889999887 5999999998887777777777773 2444443
No 427
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=32.51 E-value=26 Score=33.78 Aligned_cols=41 Identities=20% Similarity=0.242 Sum_probs=33.9
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEE
Q 002660 797 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVI 840 (895)
Q Consensus 797 sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVa 840 (895)
.+....+.+++.+|+++++++. +||+.. | +.+=+.+|+..+
T Consensus 134 p~~~~~~~~~~~~~~~p~~~~~-vgD~~~-d-~~~A~~~G~~~i 174 (176)
T PF13419_consen 134 PDPDAYRRALEKLGIPPEEILF-VGDSPS-D-VEAAKEAGIKTI 174 (176)
T ss_dssp TSHHHHHHHHHHHTSSGGGEEE-EESSHH-H-HHHHHHTTSEEE
T ss_pred hHHHHHHHHHHHcCCCcceEEE-EeCCHH-H-HHHHHHcCCeEE
Confidence 4568899999999999999988 777776 8 998888887543
No 428
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=32.48 E-value=1.8e+02 Score=32.06 Aligned_cols=99 Identities=12% Similarity=0.075 Sum_probs=60.1
Q ss_pred CcEEEEEe-CCCCCCCHH--HHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCC
Q 002660 313 KPVILALA-RPDPKKNIT--TLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKH 389 (895)
Q Consensus 313 ~~~il~vg-rl~~~Kgi~--~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~ 389 (895)
+.+++..| .-...|... ...+.++.+.+ ...++ ++.|+.++ .+....+.+.+.- .+.+.|.
T Consensus 176 ~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~--~~~~V-vl~g~~~e-----------~e~~~~i~~~~~~--~~~l~~k 239 (334)
T COG0859 176 PYIVINPGASRGSAKRWPLEHYAELAELLIA--KGYQV-VLFGGPDE-----------EERAEEIAKGLPN--AVILAGK 239 (334)
T ss_pred CeEEEeccccccccCCCCHHHHHHHHHHHHH--CCCEE-EEecChHH-----------HHHHHHHHHhcCC--ccccCCC
Confidence 45677777 555667654 55566666643 22444 45555432 1233333333331 1227888
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcC
Q 002660 390 HKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK 436 (895)
Q Consensus 390 ~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~ 436 (895)
.+..++.++...| |++|-+. + -.+-=|.|.|+|+|+-.
T Consensus 240 ~sL~e~~~li~~a----~l~I~~D---S--g~~HlAaA~~~P~I~iy 277 (334)
T COG0859 240 TSLEELAALIAGA----DLVIGND---S--GPMHLAAALGTPTIALY 277 (334)
T ss_pred CCHHHHHHHHhcC----CEEEccC---C--hHHHHHHHcCCCEEEEE
Confidence 8899999999999 9988662 2 23344788899999854
No 429
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=32.19 E-value=71 Score=30.30 Aligned_cols=44 Identities=11% Similarity=0.197 Sum_probs=33.2
Q ss_pred HHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEE
Q 002660 630 ATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFIC 679 (895)
Q Consensus 630 ~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~ 679 (895)
.+.++++.|+++ |+.++|+|+++...+...++.+ +. ..++.+++
T Consensus 68 g~~e~l~~L~~~----g~~~~i~T~~~~~~~~~~~~~~-l~-~~f~~i~~ 111 (154)
T TIGR01549 68 GAADLLKRLKEA----GIKLGIISNGSLRAQKLLLRKH-LG-DYFDLILG 111 (154)
T ss_pred CHHHHHHHHHHC----cCeEEEEeCCchHHHHHHHHHH-HH-hcCcEEEe
Confidence 367888888887 5999999999999998888875 42 12444554
No 430
>COG0716 FldA Flavodoxins [Energy production and conversion]
Probab=31.69 E-value=67 Score=30.70 Aligned_cols=38 Identities=26% Similarity=0.310 Sum_probs=30.7
Q ss_pred ceeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeec
Q 002660 3 FNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTR 56 (895)
Q Consensus 3 ~m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~ 56 (895)
||||+++. ...+|.++..+..++..|...| ++|.+.-.
T Consensus 1 M~ki~Ivy--------------~S~tGnTe~vA~~i~~~l~~~~--~~~~~~~~ 38 (151)
T COG0716 1 MMKILIVY--------------GSRTGNTEKVAEIIAEELGADG--FEVDIDIR 38 (151)
T ss_pred CCeEEEEE--------------EcCCCcHHHHHHHHHHHhccCC--ceEEEeec
Confidence 57888775 1578999999999999999999 88866543
No 431
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=31.48 E-value=67 Score=32.67 Aligned_cols=46 Identities=13% Similarity=0.116 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEc
Q 002660 629 DATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 680 (895)
Q Consensus 629 ~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 680 (895)
+.+.++|++++++ +.++|+|+.+...+...++.+++. ..+|.++++
T Consensus 100 ~g~~~~L~~l~~~-----~~~~i~Sn~~~~~~~~~l~~~~l~-~~fd~i~~~ 145 (224)
T TIGR02254 100 PGAFELMENLQQK-----FRLYIVTNGVRETQYKRLRKSGLF-PFFDDIFVS 145 (224)
T ss_pred ccHHHHHHHHHhc-----CcEEEEeCCchHHHHHHHHHCCcH-hhcCEEEEc
Confidence 3567778888774 789999999999999999999885 346766664
No 432
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=31.13 E-value=38 Score=33.06 Aligned_cols=27 Identities=7% Similarity=-0.087 Sum_probs=0.0
Q ss_pred EEEEEecCCCCcchhHHHHHHHHHHHh
Q 002660 614 IFVISVDCDSTTGLLDATKKICEAVEK 640 (895)
Q Consensus 614 li~~DiDGTL~~~~~~~~~~~l~~l~~ 640 (895)
.|+||+||||...........-..+.+
T Consensus 1 ~viFD~DGTL~D~~~~~~~~~~~~~~~ 27 (175)
T TIGR01493 1 AMVFDVYGTLVDVHGGVRACLAAIAPE 27 (175)
T ss_pred CeEEecCCcCcccHHHHHHHHHHhhhh
No 433
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=31.06 E-value=34 Score=39.85 Aligned_cols=43 Identities=14% Similarity=0.244 Sum_probs=32.5
Q ss_pred CCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEecC
Q 002660 794 VLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKG 843 (895)
Q Consensus 794 ~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgN 843 (895)
.|-.|..+|+ +.+|.+..+ ++ .||+.+ | .+||+.|+.+++++.
T Consensus 173 ~Ge~Kv~rl~---~~~g~~~~~-~a-YgDS~s-D-~plL~~a~e~y~V~~ 215 (497)
T PLN02177 173 VGDHKRDAVL---KEFGDALPD-LG-LGDRET-D-HDFMSICKEGYMVPR 215 (497)
T ss_pred ccHHHHHHHH---HHhCCCCce-EE-EECCcc-H-HHHHHhCCccEEeCC
Confidence 3444877777 556766655 66 666666 7 999999999999987
No 434
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=30.60 E-value=62 Score=32.01 Aligned_cols=34 Identities=9% Similarity=-0.020 Sum_probs=25.7
Q ss_pred eeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecCc
Q 002660 4 NNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQV 58 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~ 58 (895)
|||++|+--|. +. -.++++..++| |+|+-+++..
T Consensus 1 mKIaiIgAsG~----------------~G---s~i~~EA~~RG--HeVTAivRn~ 34 (211)
T COG2910 1 MKIAIIGASGK----------------AG---SRILKEALKRG--HEVTAIVRNA 34 (211)
T ss_pred CeEEEEecCch----------------hH---HHHHHHHHhCC--CeeEEEEeCh
Confidence 79999985553 12 24677788899 9999999864
No 435
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=30.43 E-value=23 Score=35.65 Aligned_cols=26 Identities=8% Similarity=-0.046 Sum_probs=16.5
Q ss_pred EEEEEecCCCCcchhHHHHHHHHHHHhh
Q 002660 614 IFVISVDCDSTTGLLDATKKICEAVEKE 641 (895)
Q Consensus 614 li~~DiDGTL~~~~~~~~~~~l~~l~~~ 641 (895)
+.+||+||||.... ++...+..+..+
T Consensus 1 ~a~FD~DgTL~~~~--s~~~~~~~~~~~ 26 (202)
T TIGR01490 1 LAFFDFDGTLTAKD--TLFIFLKFLASK 26 (202)
T ss_pred CeEEccCCCCCCCc--hHHHHHHHHHHc
Confidence 47899999996543 344445554444
No 436
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=29.10 E-value=46 Score=32.84 Aligned_cols=33 Identities=21% Similarity=0.416 Sum_probs=27.8
Q ss_pred ChHHHHHHH---HHHhCCCcccEEEEecCCCCCCcccccc
Q 002660 797 SRSQALRYL---YLRWGVELSKMVVFVGESGDTDYEGLLG 833 (895)
Q Consensus 797 sKg~al~~L---~~~~gi~~~~viaf~Gd~nn~D~~eMl~ 833 (895)
+|..+++.+ ... +++...+++ +||+.+ | ++||+
T Consensus 157 ~K~~~l~~~~~~~~~-~~~~~~~~~-iGDs~~-D-~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEE-DIDPDRVIA-IGDSIN-D-LPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHH-THTCCEEEE-EESSGG-G-HHHHH
T ss_pred cHHHHHHHHHHHhhc-CCCCCeEEE-EECCHH-H-HHHhC
Confidence 699999999 666 888888888 888877 8 99985
No 437
>PRK07308 flavodoxin; Validated
Probab=28.78 E-value=74 Score=30.13 Aligned_cols=27 Identities=22% Similarity=0.135 Sum_probs=22.5
Q ss_pred CCCchhHHHHHHHHHHhcCCCeeEEEEee
Q 002660 27 DTGGQVKYVVELARALGSMPGVYRVDLLT 55 (895)
Q Consensus 27 ~~GG~~~~v~~La~~L~~~G~~h~V~v~t 55 (895)
.+|-.++.+..+++.|.+.| ++|.+.-
T Consensus 11 ~tGnTe~iA~~ia~~l~~~g--~~~~~~~ 37 (146)
T PRK07308 11 MTGNTEEIADIVADKLRELG--HDVDVDE 37 (146)
T ss_pred CCchHHHHHHHHHHHHHhCC--CceEEEe
Confidence 45678999999999999998 8888763
No 438
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=28.11 E-value=34 Score=33.65 Aligned_cols=39 Identities=10% Similarity=-0.016 Sum_probs=32.2
Q ss_pred hHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEE
Q 002660 798 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTV 839 (895)
Q Consensus 798 Kg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gV 839 (895)
+...+.++++++|+++++++. +||+.. | +++=+.+|+..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~v~-IgD~~~-d-i~aA~~~G~~~ 182 (185)
T TIGR02009 144 HPETFLLAAELLGVSPNECVV-FEDALA-G-VQAARAAGMFA 182 (185)
T ss_pred ChHHHHHHHHHcCCCHHHeEE-EeCcHh-h-HHHHHHCCCeE
Confidence 445778999999999999988 788877 8 99888888653
No 439
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=28.09 E-value=77 Score=31.23 Aligned_cols=43 Identities=16% Similarity=0.149 Sum_probs=32.9
Q ss_pred HHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEc
Q 002660 632 KKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 680 (895)
Q Consensus 632 ~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 680 (895)
.+.|..|++. +.++|+||-+...+...++.+++. ..+|.++|.
T Consensus 93 ~e~L~~L~~~-----~~l~I~T~~~~~~~~~~l~~~~l~-~~fd~i~~~ 135 (188)
T PRK10725 93 IEVVKAWHGR-----RPMAVGTGSESAIAEALLAHLGLR-RYFDAVVAA 135 (188)
T ss_pred HHHHHHHHhC-----CCEEEEcCCchHHHHHHHHhCCcH-hHceEEEeh
Confidence 4677777653 689999999999999999999985 345666664
No 440
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=27.93 E-value=40 Score=39.07 Aligned_cols=39 Identities=15% Similarity=0.233 Sum_probs=30.1
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEE
Q 002660 797 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVI 840 (895)
Q Consensus 797 sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVa 840 (895)
.|-..+...+++++ ++++++ +||+.+ | +.+-+.+|..++
T Consensus 386 ~kP~~~~~al~~l~--~~~~v~-VGDs~~-D-i~aAk~AG~~~I 424 (459)
T PRK06698 386 NKSDLVKSILNKYD--IKEAAV-VGDRLS-D-INAAKDNGLIAI 424 (459)
T ss_pred CCcHHHHHHHHhcC--cceEEE-EeCCHH-H-HHHHHHCCCeEE
Confidence 46677888888765 578888 777777 8 999999997543
No 441
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=27.87 E-value=1e+02 Score=31.89 Aligned_cols=58 Identities=12% Similarity=0.093 Sum_probs=42.2
Q ss_pred cccCeEEEEEecCCCC-----------------------------cchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHH
Q 002660 609 RRRKHIFVISVDCDST-----------------------------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISE 659 (895)
Q Consensus 609 ~~~~kli~~DiDGTL~-----------------------------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~ 659 (895)
+.+++.|++|||-|.. ....+...+.++-..++ |..|+.+|-|....
T Consensus 76 k~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yvn~~----Gg~ifyiSNR~~~~ 151 (274)
T COG2503 76 KGKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYVNSN----GGKIFYISNRDQEN 151 (274)
T ss_pred cCCCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhhcccccCccHHHHHHHHHhc----CcEEEEEeccchhc
Confidence 5677799999999981 23445677888888887 47777888997665
Q ss_pred ----HHHHHHhCCCC
Q 002660 660 ----IHSFLVSGHLS 670 (895)
Q Consensus 660 ----~~~~l~~l~l~ 670 (895)
..+-|+.+|++
T Consensus 152 ~~~~T~~nLk~~g~~ 166 (274)
T COG2503 152 EKDGTIENLKSEGLP 166 (274)
T ss_pred ccchhHHHHHHcCcc
Confidence 34556667774
No 442
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=27.62 E-value=79 Score=31.00 Aligned_cols=46 Identities=22% Similarity=0.260 Sum_probs=33.4
Q ss_pred hHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEc
Q 002660 628 LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 680 (895)
Q Consensus 628 ~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 680 (895)
.+.+.++|++|+++ |+.++|+|+... ....++.+++. ..+|.++++
T Consensus 89 ~pg~~~~L~~L~~~----g~~~~i~s~~~~--~~~~l~~~~l~-~~f~~~~~~ 134 (185)
T TIGR01990 89 LPGIKNLLDDLKKN----NIKIALASASKN--APTVLEKLGLI-DYFDAIVDP 134 (185)
T ss_pred CccHHHHHHHHHHC----CCeEEEEeCCcc--HHHHHHhcCcH-hhCcEEEeh
Confidence 35678899999987 599999998753 35678888875 345666653
No 443
>PRK09449 dUMP phosphatase; Provisional
Probab=27.50 E-value=77 Score=32.36 Aligned_cols=46 Identities=13% Similarity=0.089 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEc
Q 002660 629 DATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 680 (895)
Q Consensus 629 ~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 680 (895)
+.+.++|+.|+ + |+.++|+|.-+...+...++.+++. ..+|.++++
T Consensus 98 ~g~~~~L~~L~-~----~~~~~i~Tn~~~~~~~~~l~~~~l~-~~fd~v~~~ 143 (224)
T PRK09449 98 PGAVELLNALR-G----KVKMGIITNGFTELQQVRLERTGLR-DYFDLLVIS 143 (224)
T ss_pred ccHHHHHHHHH-h----CCeEEEEeCCcHHHHHHHHHhCChH-HHcCEEEEE
Confidence 45778888888 4 4899999998888888889998874 245777665
No 444
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=27.42 E-value=1.5e+02 Score=36.57 Aligned_cols=55 Identities=7% Similarity=0.047 Sum_probs=48.9
Q ss_pred cCeEEEEEecCCC------CcchhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 611 RKHIFVISVDCDS------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 611 ~~kli~~DiDGTL------~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
.+-.+.+.+||+| .....+....+++.|++. |+.+++.||=+...+....+++|+
T Consensus 702 g~tvv~v~vn~~l~gv~~l~D~vr~~a~~av~~Lk~~----Gi~v~mLTGDn~~aA~svA~~VGi 762 (951)
T KOG0207|consen 702 GQTVVYVAVNGQLVGVFALEDQVRPDAALAVAELKSM----GIKVVMLTGDNDAAARSVAQQVGI 762 (951)
T ss_pred CceEEEEEECCEEEEEEEeccccchhHHHHHHHHHhc----CceEEEEcCCCHHHHHHHHHhhCc
Confidence 4557889999999 367778889999999998 599999999999999999999997
No 445
>PRK13587 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=26.88 E-value=1.9e+02 Score=30.05 Aligned_cols=60 Identities=15% Similarity=0.174 Sum_probs=37.8
Q ss_pred cCeEEEEEe--cCCCCcchhHHHHHHHHHHHhhccCCCeEEEEEcC--CCHHHHHHHHHhCCCCCCCCCEEEEcCCceEe
Q 002660 611 RKHIFVISV--DCDSTTGLLDATKKICEAVEKERTEGSIGFILSTS--MTISEIHSFLVSGHLSPSDFDAFICNSGSDLY 686 (895)
Q Consensus 611 ~~kli~~Di--DGTL~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTG--R~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~ 686 (895)
...+|+.|+ |||+.....+.+++..+ . .++.+ +++| |+...+..++ ++|+ +.+|. |+.+|
T Consensus 162 ~~~ii~tdi~~dGt~~G~~~~li~~l~~----~---~~ipv-i~~GGi~s~edi~~l~-~~G~-----~~viv--G~a~~ 225 (234)
T PRK13587 162 LGGIIYTDIAKDGKMSGPNFELTGQLVK----A---TTIPV-IASGGIRHQQDIQRLA-SLNV-----HAAII--GKAAH 225 (234)
T ss_pred CCEEEEecccCcCCCCccCHHHHHHHHH----h---CCCCE-EEeCCCCCHHHHHHHH-HcCC-----CEEEE--hHHHH
Confidence 357899888 67776655554444433 2 23544 7777 8999998877 4787 45554 44444
No 446
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=26.87 E-value=89 Score=31.76 Aligned_cols=49 Identities=14% Similarity=0.084 Sum_probs=31.7
Q ss_pred EeecCCCChHHHHHHHHHHhCCC-cccEEEEecCCCCCCccccccCcce-EEEecC
Q 002660 790 NVIPVLASRSQALRYLYLRWGVE-LSKMVVFVGESGDTDYEGLLGGVHK-TVILKG 843 (895)
Q Consensus 790 EI~p~g~sKg~al~~L~~~~gi~-~~~viaf~Gd~nn~D~~eMl~~ag~-gVaMgN 843 (895)
+++-|--. .|.++..+..||+ +.+++. +||+.+ - +.-=+.+|+ +|.+|-
T Consensus 156 ~~vcKP~~--~afE~a~k~agi~~p~~t~F-fDDS~~-N-I~~ak~vGl~tvlv~~ 206 (244)
T KOG3109|consen 156 TVVCKPSE--EAFEKAMKVAGIDSPRNTYF-FDDSER-N-IQTAKEVGLKTVLVGR 206 (244)
T ss_pred ceeecCCH--HHHHHHHHHhCCCCcCceEE-EcCchh-h-HHHHHhccceeEEEEe
Confidence 44444433 4678888889998 888877 777654 3 665555664 444443
No 447
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=26.41 E-value=1.7e+02 Score=27.05 Aligned_cols=54 Identities=13% Similarity=0.100 Sum_probs=39.9
Q ss_pred eEEEEEecCCCC------------cchhHHHHHHHHHHHhhccCCCeEEEEEcC-CCHHHHHHHHHhCCCC
Q 002660 613 HIFVISVDCDST------------TGLLDATKKICEAVEKERTEGSIGFILSTS-MTISEIHSFLVSGHLS 670 (895)
Q Consensus 613 kli~~DiDGTL~------------~~~~~~~~~~l~~l~~~g~~~g~~v~iaTG-R~~~~~~~~l~~l~l~ 670 (895)
+++.+++|+|+. -..-+..+..|..|+++ |+..++||- -.+.-+.+.|+.+.+.
T Consensus 19 ~~vdthl~~pfkP~k~~~g~~g~e~~fY~Di~rIL~dLk~~----GVtl~~ASRt~ap~iA~q~L~~fkvk 85 (144)
T KOG4549|consen 19 RLVDTHLDYPFKPFKCECGSKGEEMIFYDDIRRILVDLKKL----GVTLIHASRTMAPQIASQGLETFKVK 85 (144)
T ss_pred EEEEecccccccccccCcccCcceeeeccchhHHHHHHHhc----CcEEEEecCCCCHHHHHHHHHHhccC
Confidence 588899999991 11234567888889998 599888874 4666778888888774
No 448
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=25.65 E-value=58 Score=31.77 Aligned_cols=39 Identities=8% Similarity=0.061 Sum_probs=32.3
Q ss_pred HHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEE
Q 002660 799 SQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVI 840 (895)
Q Consensus 799 g~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVa 840 (895)
....+.+++++|+++++++. +||+.. | +.+=+.+|...+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~-vgD~~~-d-i~aA~~~G~~~i 181 (183)
T TIGR01509 143 PDIYLLALKKLGLKPEECLF-VDDSPA-G-IEAAKAAGMHTV 181 (183)
T ss_pred HHHHHHHHHHcCCCcceEEE-EcCCHH-H-HHHHHHcCCEEE
Confidence 67789999999999999988 777776 7 888888887543
No 449
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=25.40 E-value=1.3e+02 Score=30.69 Aligned_cols=46 Identities=9% Similarity=0.037 Sum_probs=33.0
Q ss_pred HHHHHHHH-HHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEc
Q 002660 629 DATKKICE-AVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 680 (895)
Q Consensus 629 ~~~~~~l~-~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 680 (895)
+...+.|+ .++++ |+.++|+|+-+...+.++++..++. ..+.+||.
T Consensus 97 pga~e~L~~~l~~~----G~~v~IvSas~~~~~~~ia~~~~~~--~~~~~i~t 143 (210)
T TIGR01545 97 PLVAERLRQYLESS----DADIWLITGSPQPLVEAVYFDSNFI--HRLNLIAS 143 (210)
T ss_pred ccHHHHHHHHHHhC----CCEEEEEcCCcHHHHHHHHHhcccc--ccCcEEEE
Confidence 35667775 55655 6999999999999999999886541 12456653
No 450
>KOG2884 consensus 26S proteasome regulatory complex, subunit RPN10/PSMD4 [Posttranslational modification, protein turnover, chaperones]
Probab=25.12 E-value=4.7e+02 Score=26.57 Aligned_cols=49 Identities=29% Similarity=0.348 Sum_probs=29.5
Q ss_pred HHHHHHcCCCEEEcCCCCc-hhccccC-CCeEEeCCCCHHHHHHHHHHHHh
Q 002660 422 LIEAAAHGLPIVATKNGGP-VDIHRVL-DNGLLVDPHDQQSVADALLKLVA 470 (895)
Q Consensus 422 ~~Ea~a~G~PVvas~~gg~-~eiv~~~-~~g~lv~p~d~~~la~ai~~ll~ 470 (895)
+++-.-.-.||+..+.|+. .....++ ...+=++|++--++|-||+--++
T Consensus 178 ~L~d~l~ssPii~ge~g~a~~~~~a~g~~f~fgvdp~~DPELAlALRlSME 228 (259)
T KOG2884|consen 178 LLSDALLSSPIIQGEDGGAAAGLGANGMDFEFGVDPEDDPELALALRLSME 228 (259)
T ss_pred cHHHHhhcCceeccCcccccccccccccccccCCCcccCHHHHHHHHhhHH
Confidence 5555566789998774443 3332111 12344678777789999976554
No 451
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=24.83 E-value=47 Score=38.68 Aligned_cols=27 Identities=11% Similarity=0.057 Sum_probs=22.0
Q ss_pred EEEEcCCCHHHHHHHHHh-CCCCCCCCCEEEEc
Q 002660 649 FILSTSMTISEIHSFLVS-GHLSPSDFDAFICN 680 (895)
Q Consensus 649 v~iaTGR~~~~~~~~l~~-l~l~~~~~d~~I~~ 680 (895)
.+|+|+-+...+++++++ +|+ |.+||.
T Consensus 125 ~vvVSASp~~~Vepfa~~~LGi-----d~VIgT 152 (497)
T PLN02177 125 RYIITASPRIMVEPFVKTFLGA-----DKVLGT 152 (497)
T ss_pred EEEEECCcHHHHHHHHHHcCCC-----CEEEec
Confidence 389999999999999987 788 556653
No 452
>PRK02083 imidazole glycerol phosphate synthase subunit HisF; Provisional
Probab=24.80 E-value=8.1e+02 Score=25.53 Aligned_cols=54 Identities=11% Similarity=0.206 Sum_probs=34.2
Q ss_pred ccCeEEEEEecCCCCcchhHHHHHHHHHHHhhccCCCeEEEEEcC-CCHHHHHHHHHhCCC
Q 002660 610 RRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTS-MTISEIHSFLVSGHL 669 (895)
Q Consensus 610 ~~~kli~~DiDGTL~~~~~~~~~~~l~~l~~~g~~~g~~v~iaTG-R~~~~~~~~l~~l~l 669 (895)
..+.+.+.|+|.+.+.. ....+.++++++.- ++.+.+.-| |+...+..++. .|.
T Consensus 43 G~~~i~i~dl~~~~~~~--~~~~~~i~~i~~~~---~ipv~~~GGi~s~~~~~~~l~-~Ga 97 (253)
T PRK02083 43 GADELVFLDITASSEGR--DTMLDVVERVAEQV---FIPLTVGGGIRSVEDARRLLR-AGA 97 (253)
T ss_pred CCCEEEEEeCCcccccC--cchHHHHHHHHHhC---CCCEEeeCCCCCHHHHHHHHH-cCC
Confidence 45789999999876432 34456666666652 455544333 46778877776 565
No 453
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=24.80 E-value=42 Score=31.90 Aligned_cols=35 Identities=11% Similarity=0.093 Sum_probs=27.1
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCc
Q 002660 797 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGV 835 (895)
Q Consensus 797 sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~a 835 (895)
.+...+.++++++|+++ +++. +||+.. | +.+=+.+
T Consensus 119 p~~~~~~~~~~~~~~~~-~~l~-iGDs~~-D-i~aa~~a 153 (154)
T TIGR01549 119 PEPEIFLAALESLGLPP-EVLH-VGDNLN-D-IEGARNA 153 (154)
T ss_pred cCHHHHHHHHHHcCCCC-CEEE-EeCCHH-H-HHHHHHc
Confidence 46788999999999998 8877 777766 7 6654433
No 454
>PF12996 DUF3880: DUF based on E. rectale Gene description (DUF3880); InterPro: IPR024542 This entry represents proteins of unknown function. The Eubacterium rectale gene appears to be upregulated in the presence of Bacteroides thetaiotaomicron compared to growth in pure culture [].
Probab=24.70 E-value=1.9e+02 Score=24.17 Aligned_cols=43 Identities=16% Similarity=0.204 Sum_probs=33.5
Q ss_pred hhcccCEEEeCChHHHHHHHhhhcCCChHHHHHHHHhHhccccccCCCCCCEEEeCCCCCCCCCCCCC
Q 002660 212 SLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQD 279 (895)
Q Consensus 212 ~l~~ad~vi~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~ 279 (895)
+....|.|++.-+..++.+.+. |+. +|..+|-++|+.+|.|..
T Consensus 15 i~~~~~~iFt~D~~~~~~~~~~------------------G~~-------~V~yLPLAa~~~~~~p~~ 57 (79)
T PF12996_consen 15 IANSYDYIFTFDRSFVEEYRNL------------------GAE-------NVFYLPLAANPERFRPIP 57 (79)
T ss_pred hCCCCCEEEEECHHHHHHHHHc------------------CCC-------CEEEccccCCHHHhCccc
Confidence 4778899999988777765432 222 799999999999999865
No 455
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=24.32 E-value=62 Score=35.26 Aligned_cols=35 Identities=14% Similarity=0.016 Sum_probs=25.1
Q ss_pred CcceeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecC
Q 002660 1 MIFNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQ 57 (895)
Q Consensus 1 ~~~m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~ 57 (895)
|..|||++|.. |++.. -+|..|++.| |+|+++++.
T Consensus 3 ~~~m~I~IiG~-----------------GaiG~---~lA~~L~~~g--~~V~~~~r~ 37 (313)
T PRK06249 3 SETPRIGIIGT-----------------GAIGG---FYGAMLARAG--FDVHFLLRS 37 (313)
T ss_pred CcCcEEEEECC-----------------CHHHH---HHHHHHHHCC--CeEEEEEeC
Confidence 45689998852 22232 3677888899 999999884
No 456
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=24.25 E-value=42 Score=32.99 Aligned_cols=39 Identities=10% Similarity=0.075 Sum_probs=33.2
Q ss_pred hHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEE
Q 002660 798 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTV 839 (895)
Q Consensus 798 Kg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gV 839 (895)
+...+...++++|+++++++. +||+-. | ++.=+.+|+.+
T Consensus 108 ~p~~~~~a~~~~~~~~~~~v~-VGDs~~-D-i~aA~~aG~~~ 146 (176)
T TIGR00213 108 KPGMLLQARKELHIDMAQSYM-VGDKLE-D-MQAGVAAKVKT 146 (176)
T ss_pred CHHHHHHHHHHcCcChhhEEE-EcCCHH-H-HHHHHHCCCcE
Confidence 566788999999999999998 777776 8 99989999864
No 457
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=24.12 E-value=1e+02 Score=30.76 Aligned_cols=46 Identities=11% Similarity=0.150 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEEc
Q 002660 629 DATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 680 (895)
Q Consensus 629 ~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 680 (895)
+.+.++|+.|+++ |+.++|+|+-+.. +...++.+++. ..+|.++++
T Consensus 108 ~g~~~~l~~L~~~----g~~~~i~Sn~~~~-~~~~l~~~~l~-~~fd~i~~s 153 (203)
T TIGR02252 108 PDAIKLLKDLRER----GLILGVISNFDSR-LRGLLEALGLL-EYFDFVVTS 153 (203)
T ss_pred cCHHHHHHHHHHC----CCEEEEEeCCchh-HHHHHHHCCcH-HhcceEEee
Confidence 4677889999887 5999999987654 57788888874 235656553
No 458
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=24.05 E-value=1.2e+02 Score=32.39 Aligned_cols=40 Identities=13% Similarity=0.156 Sum_probs=34.6
Q ss_pred hhHHHHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCCC
Q 002660 627 LLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 670 (895)
Q Consensus 627 ~~~~~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l~ 670 (895)
+.+.+.++++.|+++ |+.++|+||=....+...++.+++.
T Consensus 122 l~pG~~efl~~L~~~----GIpv~IvS~G~~~~Ie~vL~~lgl~ 161 (277)
T TIGR01544 122 LKDGYENFFDKLQQH----SIPVFIFSAGIGNVLEEVLRQAGVY 161 (277)
T ss_pred cCcCHHHHHHHHHHC----CCcEEEEeCCcHHHHHHHHHHcCCC
Confidence 345678999999988 5999999999999999999999883
No 459
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=24.01 E-value=2.1e+02 Score=29.19 Aligned_cols=36 Identities=11% Similarity=0.150 Sum_probs=21.0
Q ss_pred HHHHHHHHHhhccCCCeEEEEEcCCCHHHHHHHHHhCCC
Q 002660 631 TKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 669 (895)
Q Consensus 631 ~~~~l~~l~~~g~~~g~~v~iaTGR~~~~~~~~l~~l~l 669 (895)
..++++.+++.| -..++|+|--+-..+.++++.+++
T Consensus 89 mv~lik~~ak~g---~~eliIVSDaNsfFIe~~Lea~~~ 124 (256)
T KOG3120|consen 89 MVRLIKSAAKLG---CFELIIVSDANSFFIEEILEAAGI 124 (256)
T ss_pred HHHHHHHHHhCC---CceEEEEecCchhHHHHHHHHccH
Confidence 334455555553 236666666666666666666655
No 460
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=24.00 E-value=69 Score=33.86 Aligned_cols=30 Identities=30% Similarity=0.252 Sum_probs=26.2
Q ss_pred CCchhHHHHHHHHHHhcCCCeeEEEEeecCcc
Q 002660 28 TGGQVKYVVELARALGSMPGVYRVDLLTRQVS 59 (895)
Q Consensus 28 ~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~~ 59 (895)
|||....=..|...|.+.| |+|+++||+..
T Consensus 4 TGgTGlIG~~L~~~L~~~g--h~v~iltR~~~ 33 (297)
T COG1090 4 TGGTGLIGRALTARLRKGG--HQVTILTRRPP 33 (297)
T ss_pred eccccchhHHHHHHHHhCC--CeEEEEEcCCc
Confidence 6777888888999999999 99999999754
No 461
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=23.93 E-value=48 Score=31.59 Aligned_cols=34 Identities=15% Similarity=0.065 Sum_probs=25.2
Q ss_pred HHHHHHHhCCCcccEEEEecCCCCCCccccccCcceE
Q 002660 802 LRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKT 838 (895)
Q Consensus 802 l~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~g 838 (895)
+.+.++++|.+++++++ +||+-+ | +.+-..+|+-
T Consensus 104 ~~k~l~~l~~~p~~~i~-i~Ds~~-~-~~aa~~ngI~ 137 (148)
T smart00577 104 YVKDLSLLGRDLSNVII-IDDSPD-S-WPFHPENLIP 137 (148)
T ss_pred EeecHHHcCCChhcEEE-EECCHH-H-hhcCccCEEE
Confidence 66667889999999999 777776 6 7765555443
No 462
>PRK11587 putative phosphatase; Provisional
Probab=23.82 E-value=69 Score=32.68 Aligned_cols=45 Identities=11% Similarity=-0.062 Sum_probs=35.9
Q ss_pred hHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcce-EEEecCcc
Q 002660 798 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHK-TVILKGIC 845 (895)
Q Consensus 798 Kg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~-gVaMgNa~ 845 (895)
+.......++++|+++++++. +||+.. | ++.=+.+|. .|++.+..
T Consensus 140 ~p~~~~~~~~~~g~~p~~~l~-igDs~~-d-i~aA~~aG~~~i~v~~~~ 185 (218)
T PRK11587 140 EPDAYLLGAQLLGLAPQECVV-VEDAPA-G-VLSGLAAGCHVIAVNAPA 185 (218)
T ss_pred CcHHHHHHHHHcCCCcccEEE-Eecchh-h-hHHHHHCCCEEEEECCCC
Confidence 456778889999999999999 777776 7 999999996 46665543
No 463
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=23.60 E-value=5.9e+02 Score=26.71 Aligned_cols=77 Identities=14% Similarity=0.060 Sum_probs=41.8
Q ss_pred cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC-CCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHH
Q 002660 383 QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF-IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSV 461 (895)
Q Consensus 383 ~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~-~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~l 461 (895)
.+...|.++.+.=.++++.. +.|++|.=-. ..|+.-++--|..+|+|||.-.-+... ... ..+ .+.+++
T Consensus 170 iiam~gPfs~e~n~aL~~~~--~i~~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~~~-----~~~-~~~--~~~~e~ 239 (248)
T PRK08057 170 IIALRGPFSLELERALLRQH--RIDVVVTKNSGGAGTEAKLEAARELGIPVVMIARPALP-----YAD-REF--EDVAEL 239 (248)
T ss_pred EEEeeCCCCHHHHHHHHHHc--CCCEEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCCCC-----CCC-ccc--CCHHHH
Confidence 45566766665556677765 2244433211 123445566667779999886654321 111 223 366777
Q ss_pred HHHHHHHH
Q 002660 462 ADALLKLV 469 (895)
Q Consensus 462 a~ai~~ll 469 (895)
.+.+.+++
T Consensus 240 ~~~l~~~~ 247 (248)
T PRK08057 240 VAWLRHLL 247 (248)
T ss_pred HHHHHHhh
Confidence 76666544
No 464
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=23.53 E-value=49 Score=33.76 Aligned_cols=14 Identities=7% Similarity=-0.002 Sum_probs=11.9
Q ss_pred CeEEEEEecCCCCc
Q 002660 612 KHIFVISVDCDSTT 625 (895)
Q Consensus 612 ~kli~~DiDGTL~~ 625 (895)
.|+++||+||||..
T Consensus 4 ~~~viFD~DGTL~d 17 (221)
T PRK10563 4 IEAVFFDCDGTLVD 17 (221)
T ss_pred CCEEEECCCCCCCC
Confidence 57999999999943
No 465
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=23.41 E-value=45 Score=34.10 Aligned_cols=14 Identities=7% Similarity=0.026 Sum_probs=0.0
Q ss_pred ccCeEEEEEecCCC
Q 002660 610 RRKHIFVISVDCDS 623 (895)
Q Consensus 610 ~~~kli~~DiDGTL 623 (895)
...|.|+||+||||
T Consensus 2 ~~~k~i~FD~d~TL 15 (229)
T COG1011 2 MMIKAILFDLDGTL 15 (229)
T ss_pred CceeEEEEecCCcc
No 466
>PRK08238 hypothetical protein; Validated
Probab=23.23 E-value=1.1e+02 Score=35.62 Aligned_cols=45 Identities=16% Similarity=0.167 Sum_probs=32.2
Q ss_pred cCCCChHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEecCcc
Q 002660 793 PVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGIC 845 (895)
Q Consensus 793 p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaMgNa~ 845 (895)
.++..|...++ +.++ .++++. .||+.+ | ++|++.++..++++...
T Consensus 124 ~kg~~K~~~l~---~~l~--~~~~~y-vGDS~~-D-lp~~~~A~~av~Vn~~~ 168 (479)
T PRK08238 124 LKGAAKAAALV---EAFG--ERGFDY-AGNSAA-D-LPVWAAARRAIVVGASP 168 (479)
T ss_pred cCCchHHHHHH---HHhC--ccCeeE-ecCCHH-H-HHHHHhCCCeEEECCCH
Confidence 44455766655 4444 244655 688887 8 99999999999998665
No 467
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=23.02 E-value=59 Score=35.81 Aligned_cols=41 Identities=15% Similarity=0.161 Sum_probs=26.3
Q ss_pred cccCeEEEEEecCCC--C-------------cchhHHHHHHHHHHHhhccCCCeEEEEEc
Q 002660 609 RRRKHIFVISVDCDS--T-------------TGLLDATKKICEAVEKERTEGSIGFILST 653 (895)
Q Consensus 609 ~~~~kli~~DiDGTL--~-------------~~~~~~~~~~l~~l~~~g~~~g~~v~iaT 653 (895)
....|++.||||||| + .-.....-.=++.+.++ |+.++|.|
T Consensus 72 ~~~~K~i~FD~dgtlI~t~sg~vf~~~~~dw~~l~~~vp~Klktl~~~----g~~l~ift 127 (422)
T KOG2134|consen 72 NGGSKIIMFDYDGTLIDTKSGKVFPKGSMDWRILFPEVPSKLKTLYQD----GIKLFIFT 127 (422)
T ss_pred CCCcceEEEecCCceeecCCcceeeccCccceeeccccchhhhhhccC----CeEEEEEe
Confidence 456789999999999 1 01122233334555555 69988877
No 468
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=22.73 E-value=4.9e+02 Score=26.40 Aligned_cols=110 Identities=10% Similarity=0.033 Sum_probs=63.1
Q ss_pred EEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhc-CCCCcEEeCCCCCC
Q 002660 316 ILALARPDP--KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY-DLYGQVAYPKHHKQ 392 (895)
Q Consensus 316 il~vgrl~~--~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~-~l~~~v~~~g~~~~ 392 (895)
++.-|..+. ..+.+.+.+.+..+. ...+++ +++..-.. ..+++...+.....++ +....+.. ..+.
T Consensus 3 ~~igg~~~~~~~~~~~~l~~~l~~~~--~~~~~i-~~IptAs~------~~~~~~~~~~~a~~~l~G~~~~~~~--~~~~ 71 (212)
T cd03146 3 LLTSGGGLGYLAHALPAIDDLLLSLT--KARPKV-LFVPTASG------DRDEYTARFYAAFESLRGVEVSHLH--LFDT 71 (212)
T ss_pred EEEeCCcccccccchHHHHHHHHHhc--cCCCeE-EEECCCCC------CHHHHHHHHHHHHhhccCcEEEEEe--ccCc
Confidence 344444433 334555555555543 344566 35544332 1245667777777877 66433222 2225
Q ss_pred CCHHHHHHHhhcCCcEEEecCC---------CC-CCchHHHHHHHcCCCEEEcCCCCc
Q 002660 393 SDVPEIYRLAAKTKGVFINPAF---------IE-PFGLTLIEAAAHGLPIVATKNGGP 440 (895)
Q Consensus 393 ~el~~ly~~A~~~~dv~v~ps~---------~E-g~gl~~~Ea~a~G~PVvas~~gg~ 440 (895)
++..+.+..| |++++|-= .+ ++--.+.++...|+|++.+..|..
T Consensus 72 ~~~~~~l~~a----d~I~l~GG~~~~~~~~l~~~~l~~~l~~~~~~g~~i~G~SAGa~ 125 (212)
T cd03146 72 EDPLDALLEA----DVIYVGGGNTFNLLAQWREHGLDAILKAALERGVVYIGWSAGSN 125 (212)
T ss_pred ccHHHHHhcC----CEEEECCchHHHHHHHHHHcCHHHHHHHHHHCCCEEEEECHhHH
Confidence 6778899999 99999831 01 122234566677999999988765
No 469
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=22.64 E-value=6e+02 Score=26.82 Aligned_cols=110 Identities=12% Similarity=0.073 Sum_probs=62.8
Q ss_pred EeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHH
Q 002660 319 LARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEI 398 (895)
Q Consensus 319 vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~l 398 (895)
++.+.--...+.+++..+.+.+.........+.=.+......+.-..+-+..+.+..+++|+. .+.-.++.+++..+
T Consensus 29 IAGpc~ie~~~~~~~~A~~lk~~~~k~~r~~~~KpRtsp~s~~g~g~~gl~~l~~~~~~~Gl~---~~t~~~d~~~~~~l 105 (260)
T TIGR01361 29 IAGPCSVESEEQIMETARFVKEAGAKILRGGAFKPRTSPYSFQGLGEEGLKLLRRAADEHGLP---VVTEVMDPRDVEIV 105 (260)
T ss_pred EEeCCccCCHHHHHHHHHHHHHHHHHhccCceecCCCCCccccccHHHHHHHHHHHHHHhCCC---EEEeeCChhhHHHH
Confidence 444555566777888777775322110000011011111111111233456677778888763 33344445667777
Q ss_pred HHHhhcCCcEEEecCCCCCCchHHHHHHHc-CCCEEEcC
Q 002660 399 YRLAAKTKGVFINPAFIEPFGLTLIEAAAH-GLPIVATK 436 (895)
Q Consensus 399 y~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~-G~PVvas~ 436 (895)
...+ |++-++|. +-.+..++++++. |+||+.+.
T Consensus 106 ~~~~----d~lkI~s~-~~~n~~LL~~~a~~gkPVilk~ 139 (260)
T TIGR01361 106 AEYA----DILQIGAR-NMQNFELLKEVGKQGKPVLLKR 139 (260)
T ss_pred HhhC----CEEEECcc-cccCHHHHHHHhcCCCcEEEeC
Confidence 6777 99988875 6677788888876 99998764
No 470
>COG2047 Uncharacterized protein (ATP-grasp superfamily) [General function prediction only]
Probab=22.61 E-value=6.6e+02 Score=25.70 Aligned_cols=79 Identities=23% Similarity=0.193 Sum_probs=48.0
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCC-chHHHHHHHcCCCEEEcCCCCchhc-cccCCCeEEeCCCCHH
Q 002660 382 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPF-GLTLIEAAAHGLPIVATKNGGPVDI-HRVLDNGLLVDPHDQQ 459 (895)
Q Consensus 382 ~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~-gl~~~Ea~a~G~PVvas~~gg~~ei-v~~~~~g~lv~p~d~~ 459 (895)
.....+|.++..++.+.|+.. +|.+ ++- ||- |++= |+|+.+=....-|+.-. +--...|+++||..+.
T Consensus 133 eep~VlGA~ts~eLi~~lke~----gV~f-r~~-epgGgIVG----asGLllg~g~l~gm~gaCLMGeT~GY~vDpkaAk 202 (258)
T COG2047 133 EEPRVLGAVTSKELIEELKEH----GVEF-RSG-EPGGGIVG----ASGLLLGFGELRGMDGACLMGETPGYLVDPKAAK 202 (258)
T ss_pred CCceeEEecCCHHHHHHHHHc----CeEe-ccC-CCCCceec----hhhhhhhhhhhcCCCceeeccCCCccccChHHHH
Confidence 345567888899999999999 7754 443 333 3331 33333222221111110 0012469999999999
Q ss_pred HHHHHHHHHHh
Q 002660 460 SVADALLKLVA 470 (895)
Q Consensus 460 ~la~ai~~ll~ 470 (895)
++-+.+.+++.
T Consensus 203 aVL~vl~k~lg 213 (258)
T COG2047 203 AVLEVLCKMLG 213 (258)
T ss_pred HHHHHHHHHhC
Confidence 99999999886
No 471
>COG0757 AroQ 3-dehydroquinate dehydratase II [Amino acid transport and metabolism]
Probab=22.57 E-value=3.2e+02 Score=25.72 Aligned_cols=68 Identities=16% Similarity=0.276 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcC-CcEEEecCCCCCCchHHHHHHHc-CCCEEE
Q 002660 365 ASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKT-KGVFINPAFIEPFGLTLIEAAAH-GLPIVA 434 (895)
Q Consensus 365 ~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~-~dv~v~ps~~Eg~gl~~~Ea~a~-G~PVva 434 (895)
+++...+...+.+++. .+.|..+=..-++.++.+.|... .+++++|.-+--.+..+..|+++ .+|+|=
T Consensus 28 ~di~~~~~~~a~~~g~--~v~~~QSN~Eg~Lid~Ihea~~~~~~IvINpga~THTSvAlrDAi~av~iP~vE 97 (146)
T COG0757 28 EDIEADLEEEAAKLGV--EVEFRQSNHEGELIDWIHEARGKAGDIVINPGAYTHTSVALRDAIAAVSIPVVE 97 (146)
T ss_pred HHHHHHHHHHHHHcCc--eEEEEecCchHHHHHHHHHhhccCCeEEEcCccchhhHHHHHHHHHhcCCCEEE
Confidence 4556667777777776 35555554456889999988654 34999998888888999999877 899985
No 472
>PRK13015 3-dehydroquinate dehydratase; Reviewed
Probab=22.38 E-value=2.7e+02 Score=26.50 Aligned_cols=104 Identities=16% Similarity=0.232 Sum_probs=65.3
Q ss_pred hHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCC-cEEEecCCCCCCchHHHHHHHc-CCCEEEcCC--CC
Q 002660 364 SASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTK-GVFINPAFIEPFGLTLIEAAAH-GLPIVATKN--GG 439 (895)
Q Consensus 364 ~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~-dv~v~ps~~Eg~gl~~~Ea~a~-G~PVvas~~--gg 439 (895)
-+++...+...+..+++ .+.|..+=..-++.+.++.|.... .+.++|.-+--.+..+..|+++ ++|+|=-.. --
T Consensus 28 l~~i~~~~~~~a~~~g~--~~~~~QSN~EGelId~i~~a~~~~dgiIINpga~THtSiAl~DAl~~~~~P~VEVHiSNi~ 105 (146)
T PRK13015 28 LADVEALCRAAAEALGL--EVEFRQSNHEGELIDWIHEARGDVAGIVINPGAYTHTSVAIRDALAALELPVIEVHISNVH 105 (146)
T ss_pred HHHHHHHHHHHHHHcCC--EEEEEeeCcHHHHHHHHHHhhhcCCEEEEcchHHhhhHHHHHHHHHcCCCCEEEEEcCCcc
Confidence 35566777777777776 366655544557888888774433 3778887666678889999866 999985321 11
Q ss_pred chh------ccccCCCeEEeCCCCHHHHHHHHHHHHh
Q 002660 440 PVD------IHRVLDNGLLVDPHDQQSVADALLKLVA 470 (895)
Q Consensus 440 ~~e------iv~~~~~g~lv~p~d~~~la~ai~~ll~ 470 (895)
.+| ++.....|.+.- .-.+...-||..+++
T Consensus 106 aRE~fR~~S~is~~~~G~I~G-~G~~gY~lAl~al~~ 141 (146)
T PRK13015 106 AREAFRHHSYVSAIADGVICG-LGTEGYRLALRRLAT 141 (146)
T ss_pred ccccccccccccCceeEEEee-CCHHHHHHHHHHHHH
Confidence 233 333444565543 345666666666653
No 473
>PRK05993 short chain dehydrogenase; Provisional
Probab=22.25 E-value=1e+02 Score=32.60 Aligned_cols=37 Identities=30% Similarity=0.228 Sum_probs=26.9
Q ss_pred CcceeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecC
Q 002660 1 MIFNNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQ 57 (895)
Q Consensus 1 ~~~m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~ 57 (895)
|.|||.++|+ | -+||+. ..+++.|+++| ++|.++.+.
T Consensus 1 m~~~k~vlIt--G-------------asggiG---~~la~~l~~~G--~~Vi~~~r~ 37 (277)
T PRK05993 1 MDMKRSILIT--G-------------CSSGIG---AYCARALQSDG--WRVFATCRK 37 (277)
T ss_pred CCCCCEEEEe--C-------------CCcHHH---HHHHHHHHHCC--CEEEEEECC
Confidence 7777777776 1 245655 44688889999 999998775
No 474
>PRK04531 acetylglutamate kinase; Provisional
Probab=22.23 E-value=1.9e+02 Score=32.77 Aligned_cols=125 Identities=11% Similarity=0.154 Sum_probs=69.2
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCC
Q 002660 311 PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHH 390 (895)
Q Consensus 311 ~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~ 390 (895)
+.+..++-+|.-.-...++.+...+..+... .-++++|-|+++ .+..+.++.++.+...---.+
T Consensus 35 ~~~~~VIKiGG~~l~~~~~~l~~dla~L~~~--G~~~VlVHGggp--------------qI~~~l~~~gie~~~v~G~RV 98 (398)
T PRK04531 35 AERFAVIKVGGAVLRDDLEALASSLSFLQEV--GLTPIVVHGAGP--------------QLDAELDAAGIEKETVNGLRV 98 (398)
T ss_pred CCcEEEEEEChHHhhcCHHHHHHHHHHHHHC--CCcEEEEECCCH--------------HHHHHHHHcCCCcEEECCEec
Confidence 3466677777632223567888888877432 335556778875 456777788876654333345
Q ss_pred CCCCHHHHHHHhhcCCcEEEecCCCCCCchH--HHHHHHcCC-CEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHH
Q 002660 391 KQSDVPEIYRLAAKTKGVFINPAFIEPFGLT--LIEAAAHGL-PIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLK 467 (895)
Q Consensus 391 ~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~--~~Ea~a~G~-PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ 467 (895)
..++..+....+. .-++. +++ +.+++..|. |||++ .|- ...|..+|- |.+.+|.+|..
T Consensus 99 Td~~tl~vv~~~l----~~vn~------~lv~~I~~~L~~g~IPVlsp-lg~-------~~~G~~~Nv-naD~vA~~LA~ 159 (398)
T PRK04531 99 TSPEALAIVRKVF----QRSNL------DLVEAVESSLRAGSIPVIAS-LGE-------TPSGQILNI-NADVAANELVS 159 (398)
T ss_pred CCHHHHHHHHHHH----HHHHH------HHHHHHHHHHHCCCEEEEeC-cEE-------CCCCcEEEE-CHHHHHHHHHH
Confidence 5556555555551 11111 221 445667775 66643 331 123444432 67778887776
Q ss_pred HHh
Q 002660 468 LVA 470 (895)
Q Consensus 468 ll~ 470 (895)
.|.
T Consensus 160 aL~ 162 (398)
T PRK04531 160 ALQ 162 (398)
T ss_pred HcC
Confidence 664
No 475
>cd01020 TroA_b Metal binding protein TroA_b. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=22.10 E-value=5.1e+02 Score=27.32 Aligned_cols=101 Identities=17% Similarity=0.137 Sum_probs=59.1
Q ss_pred HHHHHHhhcCCcEEEecC-CCCCCchHHHHHHHcCCCEEEcCCCCchhccccCCCeEEeCCCCHHHHHHHHHHHHh--CH
Q 002660 396 PEIYRLAAKTKGVFINPA-FIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVA--DK 472 (895)
Q Consensus 396 ~~ly~~A~~~~dv~v~ps-~~Eg~gl~~~Ea~a~G~PVvas~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~--~~ 472 (895)
..-++.| |++|.-- -.|++=-.+++.. .+.+++....++..+ -...+.-+..+|.+...++++|.+.|. ||
T Consensus 47 ~~~l~~A----Dliv~~G~~lE~~~~k~~~~~-~~~~v~~~~~~~~~~-~~~~dPH~Wldp~n~~~~a~~I~~~L~~~dP 120 (264)
T cd01020 47 AAKVSTA----DIVVYNGGGYDPWMTKLLADT-KDVIVIAADLDGHDD-KEGDNPHLWYDPETMSKVANALADALVKADP 120 (264)
T ss_pred HHHHhhC----CEEEEeCCCchHHHHHHHHhc-CCceEEeeecccccC-CCCCCCceecCHhHHHHHHHHHHHHHHHhCc
Confidence 3444555 7776653 2454444444444 345555543332111 001234467889999999999999997 88
Q ss_pred HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHc
Q 002660 473 QLWARCRQNGLKNIHLFSWPEHCKTYLSRIAG 504 (895)
Q Consensus 473 ~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~~~ 504 (895)
+....+.+|+.++.++ +...-+.+.+.+..
T Consensus 121 ~~~~~y~~N~~~~~~~--l~~l~~~~~~~~~~ 150 (264)
T cd01020 121 DNKKYYQANAKKFVAS--LKPLAAKIAELSAK 150 (264)
T ss_pred ccHHHHHHHHHHHHHH--HHHHHHHHHHHHhh
Confidence 8888888888877653 33333444444443
No 476
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=22.08 E-value=1.5e+02 Score=31.82 Aligned_cols=53 Identities=8% Similarity=0.041 Sum_probs=37.8
Q ss_pred EEEEEecCCC--CcchhHHHHHHHHHHHhhccCCCeEEEEEc---CCCHHHHHHHHHhCCCC
Q 002660 614 IFVISVDCDS--TTGLLDATKKICEAVEKERTEGSIGFILST---SMTISEIHSFLVSGHLS 670 (895)
Q Consensus 614 li~~DiDGTL--~~~~~~~~~~~l~~l~~~g~~~g~~v~iaT---GR~~~~~~~~l~~l~l~ 670 (895)
.++||-||-| -....+.+.++++.|++.| -.++++| .++.....+-++.+|+.
T Consensus 24 tfifDcDGVlW~g~~~ipGs~e~l~~L~~~g----K~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 24 TFIFDCDGVLWLGEKPIPGSPEALNLLKSLG----KQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred EEEEcCCcceeecCCCCCChHHHHHHHHHcC----CcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 7899999999 3556677889999999985 4455555 45555555556677773
No 477
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=22.07 E-value=98 Score=32.57 Aligned_cols=32 Identities=9% Similarity=0.264 Sum_probs=27.7
Q ss_pred cCCCChHHHHHHHHHHhCCCcccEEEEecCCCC
Q 002660 793 PVLASRSQALRYLYLRWGVELSKMVVFVGESGD 825 (895)
Q Consensus 793 p~g~sKg~al~~L~~~~gi~~~~viaf~Gd~nn 825 (895)
-.|.+||.+|..++++.|..++.+|. +||+-.
T Consensus 158 t~~~~KG~~L~~fL~~~~~~pk~IIf-IDD~~~ 189 (252)
T PF11019_consen 158 TGGQDKGEVLKYFLDKINQSPKKIIF-IDDNKE 189 (252)
T ss_pred eCCCccHHHHHHHHHHcCCCCCeEEE-EeCCHH
Confidence 45679999999999999999998877 888765
No 478
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=21.77 E-value=8.6e+02 Score=24.78 Aligned_cols=47 Identities=17% Similarity=0.264 Sum_probs=36.2
Q ss_pred CCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHcCCCEEEcC
Q 002660 381 YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK 436 (895)
Q Consensus 381 ~~~v~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~G~PVvas~ 436 (895)
..........+.+++..+++.+ +++|-..+ =.++=|+++|+|+|+-.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~----~~~Is~Rl-----H~~I~a~~~g~P~i~i~ 283 (286)
T PF04230_consen 237 FNVIIIDYSLSPDELLELISQA----DLVISMRL-----HGAILALSLGVPVIAIS 283 (286)
T ss_pred cceeEecCCCCHHHHHHHHhcC----CEEEecCC-----HHHHHHHHcCCCEEEEe
Confidence 3445666777788999999999 99886654 25677999999999854
No 479
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=21.59 E-value=52 Score=33.85 Aligned_cols=45 Identities=4% Similarity=-0.051 Sum_probs=36.5
Q ss_pred hHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceE--EEecCcc
Q 002660 798 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKT--VILKGIC 845 (895)
Q Consensus 798 Kg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~g--VaMgNa~ 845 (895)
+......+++++|++++++++ +||+.. | +..=+.+|.. +++.|..
T Consensus 151 ~p~~~~~~~~~~~~~p~~~l~-igDs~~-d-i~aA~~aG~~~~~~v~~~~ 197 (224)
T PRK14988 151 DQRLWQAVAEHTGLKAERTLF-IDDSEP-I-LDAAAQFGIRYCLGVTNPD 197 (224)
T ss_pred CHHHHHHHHHHcCCChHHEEE-EcCCHH-H-HHHHHHcCCeEEEEEeCCC
Confidence 366789999999999999988 788776 7 9888899985 3456654
No 480
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=21.39 E-value=6.3e+02 Score=26.23 Aligned_cols=112 Identities=10% Similarity=0.008 Sum_probs=67.8
Q ss_pred cEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCCC
Q 002660 314 PVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQS 393 (895)
Q Consensus 314 ~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~ 393 (895)
.++++-+++...-=++.....+..+.. +.+++. ++..-...+ ..+.|..+..+...+++.. +..+.. .+
T Consensus 3 ~ll~s~~~~~~~~~l~~~~~~~~~~~~--~~~~v~-fIPtAs~~~----~~~~y~~~~~~af~~lG~~--v~~l~~--~~ 71 (233)
T PRK05282 3 LLLLSNSTLPGTGYLEHALPLIAELLA--GRRKAV-FIPYAGVTQ----SWDDYTAKVAEALAPLGIE--VTGIHR--VA 71 (233)
T ss_pred EEEEecCCCCCCchHHHHHHHHHHHHc--CCCeEE-EECCCCCCC----CHHHHHHHHHHHHHHCCCE--EEEecc--ch
Confidence 356777777664334666666666642 445664 343221111 1245667788888888875 333322 35
Q ss_pred CHHHHHHHhhcCCcEEEecCC----------CCCCchHHHHHHHcCCCEEEcCCCCc
Q 002660 394 DVPEIYRLAAKTKGVFINPAF----------IEPFGLTLIEAAAHGLPIVATKNGGP 440 (895)
Q Consensus 394 el~~ly~~A~~~~dv~v~ps~----------~Eg~gl~~~Ea~a~G~PVvas~~gg~ 440 (895)
+..+.+..| |++.++== .-++--.+.|+...|+|++.+.+|+.
T Consensus 72 d~~~~l~~a----d~I~v~GGnt~~l~~~l~~~gl~~~l~~~~~~G~~~~G~SAGAi 124 (233)
T PRK05282 72 DPVAAIENA----EAIFVGGGNTFQLLKQLYERGLLAPIREAVKNGTPYIGWSAGAN 124 (233)
T ss_pred hhHHHHhcC----CEEEECCccHHHHHHHHHHCCcHHHHHHHHHCCCEEEEECHHHH
Confidence 667888888 98776620 11222346789999999999998874
No 481
>PRK10037 cell division protein; Provisional
Probab=21.29 E-value=1e+02 Score=32.19 Aligned_cols=26 Identities=23% Similarity=0.233 Sum_probs=21.3
Q ss_pred CCchhH--HHHHHHHHHhcCCCeeEEEEee
Q 002660 28 TGGQVK--YVVELARALGSMPGVYRVDLLT 55 (895)
Q Consensus 28 ~GG~~~--~v~~La~~L~~~G~~h~V~v~t 55 (895)
.||+.+ .+.+||.+|+++| ++|.|+=
T Consensus 10 KGGvGKTT~a~nLA~~La~~G--~rVLlID 37 (250)
T PRK10037 10 RGGVGTTSITAALAWSLQMLG--ENVLVID 37 (250)
T ss_pred CCCccHHHHHHHHHHHHHhcC--CcEEEEe
Confidence 455555 6799999999999 9999983
No 482
>PF03358 FMN_red: NADPH-dependent FMN reductase; InterPro: IPR005025 NADPH-dependent FMN reductase (1.5.1.29 from EC) reduces FMN and also reduces riboflavin and FAD, although more slowly. Members of this entry catalyse the reaction NAD(P)H + FMN = NAD(P)(+) + FMNH(2).; PDB: 3SVL_B 3GFS_F 3GFQ_A 1NNI_1 2GSW_B 3GFR_D 1T0I_B 3D7N_A 2R97_A 3B6K_A ....
Probab=21.14 E-value=1.6e+02 Score=27.79 Aligned_cols=38 Identities=13% Similarity=0.153 Sum_probs=26.6
Q ss_pred eeEeeeecccccccCcccCCCCC-CCCchhHHHHHHHHHHhcCCCeeEEEEeec
Q 002660 4 NNYFACSIHGLIRGENMELGRDS-DTGGQVKYVVELARALGSMPGVYRVDLLTR 56 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~-~~GG~~~~v~~La~~L~~~G~~h~V~v~t~ 56 (895)
|||++|+ |- | ..|=....+..+++.+.+.| ++|+++-.
T Consensus 1 Mkilii~--gS-----------~r~~~~t~~l~~~~~~~l~~~g--~e~~~i~l 39 (152)
T PF03358_consen 1 MKILIIN--GS-----------PRKNSNTRKLAEAVAEQLEEAG--AEVEVIDL 39 (152)
T ss_dssp -EEEEEE--SS-----------SSTTSHHHHHHHHHHHHHHHTT--EEEEEEEC
T ss_pred CEEEEEE--Cc-----------CCCCCHHHHHHHHHHHHHHHcC--CEEEEEec
Confidence 7999986 32 3 33555667777777888888 99999954
No 483
>PRK12342 hypothetical protein; Provisional
Probab=21.13 E-value=1.8e+02 Score=30.68 Aligned_cols=35 Identities=14% Similarity=0.014 Sum_probs=28.4
Q ss_pred CCCcEEEecc----ccchhHHHHHhccCCCCEEEEeCCC
Q 002660 143 VWPVAIHGHY----ADAGDSAALLSGALNVPMLFTGHSL 177 (895)
Q Consensus 143 ~~pDvVh~h~----~~~~~~~~~~~~~~~ip~v~t~H~~ 177 (895)
..||+|.|-. .+++.++..++..+|+|++....++
T Consensus 108 ~~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~~~ 146 (254)
T PRK12342 108 IGFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVSKI 146 (254)
T ss_pred hCCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEEEE
Confidence 4599999853 3688999999999999988777654
No 484
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=21.08 E-value=1.1e+02 Score=33.74 Aligned_cols=27 Identities=30% Similarity=0.167 Sum_probs=20.6
Q ss_pred CCchhHHHHHHHHHHhcCCCeeEEEEeecCc
Q 002660 28 TGGQVKYVVELARALGSMPGVYRVDLLTRQV 58 (895)
Q Consensus 28 ~GG~~~~v~~La~~L~~~G~~h~V~v~t~~~ 58 (895)
+||+-..| -|.-|.++| |+|.=++...
T Consensus 11 SGGVDSSV--aA~lLk~QG--yeViGl~m~~ 37 (356)
T COG0482 11 SGGVDSSV--AAYLLKEQG--YEVIGLFMKN 37 (356)
T ss_pred cCCHHHHH--HHHHHHHcC--CeEEEEEEEe
Confidence 67888776 456688899 9999877654
No 485
>PRK05632 phosphate acetyltransferase; Reviewed
Probab=21.02 E-value=8.8e+02 Score=29.71 Aligned_cols=24 Identities=25% Similarity=0.329 Sum_probs=20.7
Q ss_pred chhHHHHHHHHHHhcCCCeeEEEEee
Q 002660 30 GQVKYVVELARALGSMPGVYRVDLLT 55 (895)
Q Consensus 30 G~~~~v~~La~~L~~~G~~h~V~v~t 55 (895)
|-...+..|++.|.++| .+|-.+=
T Consensus 15 GKT~vslgL~~~L~~~G--~~Vg~fK 38 (684)
T PRK05632 15 GLTSVSLGLMRALERKG--VKVGFFK 38 (684)
T ss_pred CHHHHHHHHHHHHHhCC--CeEEEeC
Confidence 66778899999999999 8888873
No 486
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=20.95 E-value=1.2e+03 Score=26.00 Aligned_cols=113 Identities=16% Similarity=0.195 Sum_probs=66.7
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEec----CCCccccccchHHHHHHHHHHHHhcCCCCcEEe
Q 002660 311 PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGN----RDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAY 386 (895)
Q Consensus 311 ~~~~~il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~----~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~ 386 (895)
.++++++..| +..-..-+.+++..+.+.+. ..++ +-|+ +......+.-..+-+..+.+..++.|+. .+
T Consensus 98 g~~~l~vIAG-PCsIEs~eq~l~~A~~lk~~--g~~~--~r~g~~kpRtsp~sf~G~g~~gl~~L~~~~~e~Gl~---~~ 169 (352)
T PRK13396 98 ENHPVVVVAG-PCSVENEEMIVETAKRVKAA--GAKF--LRGGAYKPRTSPYAFQGHGESALELLAAAREATGLG---II 169 (352)
T ss_pred CCCeEEEEEe-CCcccCHHHHHHHHHHHHHc--CCCE--EEeeeecCCCCCcccCCchHHHHHHHHHHHHHcCCc---EE
Confidence 3455555555 45556677888888888642 2233 2222 1111111222234455666667777763 33
Q ss_pred CCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHc-CCCEEEcC
Q 002660 387 PKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH-GLPIVATK 436 (895)
Q Consensus 387 ~g~~~~~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~-G~PVvas~ 436 (895)
..-++.+++..+...+ |++=++|. +-.+..++++++. |+||+.+.
T Consensus 170 tev~d~~~v~~~~~~~----d~lqIga~-~~~n~~LL~~va~t~kPVllk~ 215 (352)
T PRK13396 170 TEVMDAADLEKIAEVA----DVIQVGAR-NMQNFSLLKKVGAQDKPVLLKR 215 (352)
T ss_pred EeeCCHHHHHHHHhhC----CeEEECcc-cccCHHHHHHHHccCCeEEEeC
Confidence 4444556677776667 99999985 5556777877765 99998764
No 487
>PRK06769 hypothetical protein; Validated
Probab=20.41 E-value=50 Score=32.44 Aligned_cols=41 Identities=24% Similarity=0.284 Sum_probs=33.2
Q ss_pred hHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEe
Q 002660 798 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 798 Kg~al~~L~~~~gi~~~~viaf~Gd~nn~D~~eMl~~ag~gVaM 841 (895)
+-.-+...++++|+++++++. +||+.. | +..=+.+|..++.
T Consensus 95 ~p~~~~~~~~~l~~~p~~~i~-IGD~~~-D-i~aA~~aGi~~i~ 135 (173)
T PRK06769 95 STGMLLQAAEKHGLDLTQCAV-IGDRWT-D-IVAAAKVNATTIL 135 (173)
T ss_pred CHHHHHHHHHHcCCCHHHeEE-EcCCHH-H-HHHHHHCCCeEEE
Confidence 455678889999999999998 778776 8 8888888875554
No 488
>TIGR01088 aroQ 3-dehydroquinate dehydratase, type II. This model specifies the type II enzyme. The type I enzyme, often found as part of a multifunctional protein, is described by TIGR01093.
Probab=20.25 E-value=3.2e+02 Score=25.81 Aligned_cols=103 Identities=17% Similarity=0.245 Sum_probs=63.9
Q ss_pred hHHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCC-cEEEecCCCCCCchHHHHHHHc-CCCEEEcCC--CC
Q 002660 364 SASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTK-GVFINPAFIEPFGLTLIEAAAH-GLPIVATKN--GG 439 (895)
Q Consensus 364 ~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~ly~~A~~~~-dv~v~ps~~Eg~gl~~~Ea~a~-G~PVvas~~--gg 439 (895)
-+++...+...+..+++ .+.|..+=..-++.+.++.|.... .++++|.-+--.+..+..|++. ++|+|=-.. --
T Consensus 26 l~di~~~~~~~a~~~g~--~v~~~QSN~EGelId~i~~a~~~~dgiIINpga~THtSiAl~DAl~~~~~P~vEVHiSNi~ 103 (141)
T TIGR01088 26 LEEIVEIIETFAAQLNV--ELEFFQSNSEGQLIDKIHEAEGQYDGIIINPGALTHTSVALRDALAAVSLPVVEVHLSNVH 103 (141)
T ss_pred HHHHHHHHHHHHHHcCC--EEEEEeeCcHHHHHHHHHhccccCCEEEEcChHHhhhHHHHHHHHHcCCCCEEEEEcCCcc
Confidence 45666777777777775 366655544557888888885433 3678887777788899999876 999985221 11
Q ss_pred chh------ccccCCCeEEeCCCCHHHHHHHHHHHH
Q 002660 440 PVD------IHRVLDNGLLVDPHDQQSVADALLKLV 469 (895)
Q Consensus 440 ~~e------iv~~~~~g~lv~p~d~~~la~ai~~ll 469 (895)
.+| ++..-..|.+.- .-.+...-||..++
T Consensus 104 aRE~fR~~S~is~~~~G~I~G-~G~~gY~lAl~a~~ 138 (141)
T TIGR01088 104 AREEFRHHSYTAPVAGGVIVG-LGAQGYLLALRYLV 138 (141)
T ss_pred ccccccccccccccceEEEee-cCHHHHHHHHHHHH
Confidence 222 233333455543 34556666665554
No 489
>KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism]
Probab=20.06 E-value=1.5e+02 Score=33.17 Aligned_cols=32 Identities=16% Similarity=-0.073 Sum_probs=23.3
Q ss_pred eeEeeeecccccccCcccCCCCCCCCchhHHHHHHHHHHhcCCCeeEEEEeecC
Q 002660 4 NNYFACSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQ 57 (895)
Q Consensus 4 m~I~~is~~~~~~~~~~~~~~~~~~GG~~~~v~~La~~L~~~G~~h~V~v~t~~ 57 (895)
|||++|..--+ |++.| ..|++.| |+|.++..-
T Consensus 1 mkiaiigqs~f---------------g~~vy-----~~lrk~g--heiv~vfti 32 (881)
T KOG2452|consen 1 MKIAVIGQSLF---------------GQEVY-----CHLRKEG--HEVVGVFTV 32 (881)
T ss_pred CeeEEechhhh---------------hHHHH-----HHHHhcC--ceEEEEEEe
Confidence 79998875554 66655 5899999 998875443
No 490
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=20.04 E-value=1.1e+03 Score=25.11 Aligned_cols=110 Identities=18% Similarity=0.190 Sum_probs=65.6
Q ss_pred EEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEec---CCCccccccchHHHHHHHHHHHHhcCCCCcEEeCCCCCC
Q 002660 316 ILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGN---RDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQ 392 (895)
Q Consensus 316 il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~---~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~ 392 (895)
++.+..+---...+.+++..+.+++... .+ +..|. +......+.-..+-...+.+...++|+.= +...++.
T Consensus 28 ~~~iaGPCsie~~~~~~~~A~~lk~~g~--~~-~r~~~~kpRTs~~s~~G~g~~gl~~l~~~~~~~Gl~~---~te~~d~ 101 (266)
T PRK13398 28 KIIIAGPCAVESEEQMVKVAEKLKELGV--HM-LRGGAFKPRTSPYSFQGLGEEGLKILKEVGDKYNLPV---VTEVMDT 101 (266)
T ss_pred EEEEEeCCcCCCHHHHHHHHHHHHHcCC--CE-EEEeeecCCCCCCccCCcHHHHHHHHHHHHHHcCCCE---EEeeCCh
Confidence 3444444555678888998888875322 22 23331 11111222223455677778888888742 2334445
Q ss_pred CCHHHHHHHhhcCCcEEEecCCCCCCchHHHHHHHc-CCCEEEcC
Q 002660 393 SDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH-GLPIVATK 436 (895)
Q Consensus 393 ~el~~ly~~A~~~~dv~v~ps~~Eg~gl~~~Ea~a~-G~PVvas~ 436 (895)
.++..+...+ |++-++|. +-.+..++++++. |+||+.+.
T Consensus 102 ~~~~~l~~~v----d~~kIga~-~~~n~~LL~~~a~~gkPV~lk~ 141 (266)
T PRK13398 102 RDVEEVADYA----DMLQIGSR-NMQNFELLKEVGKTKKPILLKR 141 (266)
T ss_pred hhHHHHHHhC----CEEEECcc-cccCHHHHHHHhcCCCcEEEeC
Confidence 5666666667 99888875 5556767777655 99998765
No 491
>PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS. This fungus produces a thick extracellular polysaccharide capsule which is well recognised as a virulence factor. CAP10 is required for capsule formation and virulence [].
Probab=20.02 E-value=2e+02 Score=32.60 Aligned_cols=89 Identities=12% Similarity=-0.027 Sum_probs=57.0
Q ss_pred HHHHHHHcCCCEEEcCCC---CchhccccCCCeEEeCC-CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHH
Q 002660 421 TLIEAAAHGLPIVATKNG---GPVDIHRVLDNGLLVDP-HDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHC 495 (895)
Q Consensus 421 ~~~Ea~a~G~PVvas~~g---g~~eiv~~~~~g~lv~p-~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~a 495 (895)
.+.=-|+||-.|+..... -..+.+....+=+=|.. +|..+|.++|..+.+++++.++++++|++++ +..+.+.+.
T Consensus 229 RlkylL~c~SvVl~~~~~~~e~f~~~L~P~vHYVPV~~~~d~sdL~~~v~w~~~~~~~A~~IA~~g~~f~~~~L~~~~~~ 308 (395)
T PF05686_consen 229 RLKYLLACNSVVLKVKSPYYEFFYRALKPWVHYVPVKRDDDLSDLEEKVEWLNAHDDEAQRIAENGQRFAREYLTMEDVY 308 (395)
T ss_pred hHHHHHcCCceEEEeCCcHHHHHHhhhcccccEEEeccccchhhHHHHhhhcccChHHHHHHHHHHHHHHHHHhhhhHHH
Confidence 344457777777764321 11122223334344443 4788999999999999999999999999999 577777776
Q ss_pred HHHH---HHHHcccCCC
Q 002660 496 KTYL---SRIAGCKPRH 509 (895)
Q Consensus 496 ~~~~---~~~~~~~~~~ 509 (895)
.=+. ..|.+++.-.
T Consensus 309 ~Y~~~LL~eYa~l~~~~ 325 (395)
T PF05686_consen 309 CYWRRLLLEYAKLLRFK 325 (395)
T ss_pred HHHHHHHHHHHHHhCCC
Confidence 5444 4444454433
Done!