BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002662
(895 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A8IQE0|CCD39_CHLRE Coiled-coil domain-containing protein 39 OS=Chlamydomonas
reinhardtii GN=CCDC39 PE=1 SV=1
Length = 894
Score = 41.6 bits (96), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 21/190 (11%)
Query: 443 SDNKVRLLETQVCKEQNVSASWKKRVEELENEIKKLREELESEKAAREVAWAKVSGLELD 502
+D +V E +V K+++V A + R EEL N+++ ++ L KAA E+A V +
Sbjct: 289 ADARVAYYEREVGKQRDVLAREQARTEELNNQVELVKATLS--KAATELAQRTVENKQ-- 344
Query: 503 ILAATRDLDFERRRLKAARERIMLRETQLR-------AFYSTTEEISVLFARQQEQLKAM 555
A DLD +R++L AAR+R ++ + +L + + E+ + ++ +LKA+
Sbjct: 345 ---AREDLDAKRQKLDAARKRFVVLKRKLENEFGNLDSMEAKASELEAMRRGEEARLKAI 401
Query: 556 QK--TLEDEENYENTSVDIDLCVPDGENSRTIVGEKLPNGHHSNSAAKADSSGEASTTEK 613
K L +E Y+ + V DL + E I G G + N AA+ + E
Sbjct: 402 LKEHELLKKEQYKRSQVLFDLRQKERELISEISG---GQGQNKNLAARIHALDEQVVA-- 456
Query: 614 HDCDIRSQEE 623
+RS+EE
Sbjct: 457 RAGGVRSEEE 466
>sp|P49025|CTRO_MOUSE Citron Rho-interacting kinase OS=Mus musculus GN=Cit PE=1 SV=3
Length = 2055
Score = 41.2 bits (95), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 133/263 (50%), Gaps = 25/263 (9%)
Query: 296 HQLKVLRDMLDAKQKELAEISRISAEQKHEMEDLNDRLSASMQSCTEANEIMKSQKVTID 355
H+L +D + E +++ +I+AEQ+ ++++L ++L ++++ TEA E++++ + +
Sbjct: 607 HKLMKAKDQGKPEVGEYSKLEKINAEQQLKIQELQEKLEKAVKASTEATELLQNIRQAKE 666
Query: 356 ELKTQLDEERNL---------RRVDRENAEADLKAAVQKSQLETQEKLK-RLSDAASRRE 405
+ +L++ N + V+ E L+ V++ LET E+ + RL D +
Sbjct: 667 RAERELEKLHNREDSSEGIKKKLVEAEERRHSLENKVKR--LETMERRENRLKDDIQTKS 724
Query: 406 LEQQEVINK-LQIAEKQSSLQVESLKLKLDETRERLVTSDNKVRLLETQVCKEQNVSASW 464
+ Q++ +K L++ EK QV + L++ +++ + K+++L+ Q+ K+ S
Sbjct: 725 EQIQQMADKILELEEKHREAQVSAQHLEV-HLKQKEQHYEEKIKVLDNQIKKDLADKESL 783
Query: 465 KKRVEELENEIKKLREELESEKAAREVAWAKVSGLELDI--------LAATRDLDFERRR 516
+ ++ E E + + L +KA +K+ LE I LAA L F +R
Sbjct: 784 ENMMQRHEEEAHEKGKILSEQKAMINAMDSKIRSLEQRIVELSEANKLAANSSL-FTQRN 842
Query: 517 LKAARERIMLRETQLRAFYSTTE 539
+KA E M+ E + + FY T+
Sbjct: 843 MKAQEE--MISELRQQKFYLETQ 863
Score = 35.4 bits (80), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 157/333 (47%), Gaps = 51/333 (15%)
Query: 245 RSLQRSNTELRKQLESQVLEIDKLRNENRVVVERHEKEMKEMKESVSISYLHQLKVLRDM 304
RSL+++ E+ ++ + + + +R ++R +++E+KE Y Q++ +R M
Sbjct: 518 RSLEQARMEVSQEDDKALQLLHDIREQSR--------KLQEIKEQ---EYQAQVEEMRLM 566
Query: 305 LDAKQKELAEISRISAEQKHEMEDLNDRLSASMQSCTEANEIMKSQKVTIDELKTQLDEE 364
++ +++L R S + E+ + RL+A + +ANE D+ K ++ E
Sbjct: 567 MNQLEEDLVSARRRSDLYESELRE--SRLAAE-EFKRKANECQHKLMKAKDQGKPEVGEY 623
Query: 365 RNLRRVDRENAEADLKAAVQKSQLETQEKLKRLSDAASRRELEQQEVINKLQIAEKQSSL 424
L ++ NAE LK E QEKL++ A++ E E++ ++ A++++
Sbjct: 624 SKLEKI---NAEQQLKIQ------ELQEKLEKAVKAST----EATELLQNIRQAKERAER 670
Query: 425 QVESL----------KLKLDETRERLVTSDNKVRLLETQVCKEQNVSASWKKRVEELENE 474
++E L K KL E ER + +NKV+ LET +E + + + E+++
Sbjct: 671 ELEKLHNREDSSEGIKKKLVEAEERRHSLENKVKRLETMERRENRLKDDIQTKSEQIQQM 730
Query: 475 IKKLREELESEKAAREVAWAKVSGLELDILAATRDLDFERRRLKAARERIMLRETQLRAF 534
K+ LE E+ RE A+VS L++ ++ +E E+I + + Q++
Sbjct: 731 ADKI---LELEEKHRE---AQVSAQHLEVHLKQKEQHYE--------EKIKVLDNQIKKD 776
Query: 535 YSTTEEISVLFARQQEQLKAMQKTLEDEENYEN 567
+ E + + R +E+ K L +++ N
Sbjct: 777 LADKESLENMMQRHEEEAHEKGKILSEQKAMIN 809
>sp|Q08379|GOGA2_HUMAN Golgin subfamily A member 2 OS=Homo sapiens GN=GOLGA2 PE=1 SV=3
Length = 1002
Score = 37.0 bits (84), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 145/302 (48%), Gaps = 44/302 (14%)
Query: 236 DGPLSLDDFRSLQRSNTELRKQLESQV-------LEIDKLRNENRVVVERHEKEMKE--- 285
+GP S + + L+ +L L+S + I+KL+ +N+ + ++ E+E KE
Sbjct: 148 EGPASSANLKDLESRYQQLAVALDSSYVTNKQLNITIEKLKQQNQEITDQLEEEKKECHQ 207
Query: 286 ----MKESVSISYLHQLKVLRDMLDAKQKELAEISRISAEQKHEMEDLNDRLSASMQSCT 341
++E + + ++ + +L Q LA + +++ E EDL RL S +
Sbjct: 208 KQGALREQLQV-HIQTIGILVSEKAELQTALAHTQHAARQKEGESEDLASRLQYSRRRVG 266
Query: 342 E---ANEIMKSQKVTIDELKTQLDEERNLRRVD-RENAEADLKAAVQKSQLETQEKLKRL 397
E A + +Q+ D +L +ER+ R++ +N +++ +KS+LE EKL+ L
Sbjct: 267 ELERALSAVSTQQKKADRYNKELTKERDALRLELYKNTQSNEDLKQEKSELE--EKLRVL 324
Query: 398 SDAASRRELEQQEVINKLQIAE---KQSSLQVES------LKLKLDETRE---RLVTSDN 445
+ +L +E+ KL++ E +Q S + E+ L+ ++E + L
Sbjct: 325 VTEKAGMQLNLEELQKKLEMTELLLQQFSSRCEAPDANQQLQQAMEERAQLEAHLGQVME 384
Query: 446 KVRLLETQVCK-EQNV---SASWKKRVEELENEIKKLREELESEKAAREVAWAKVSGLEL 501
VR L+ + K +N+ SA W++R++++ ++ LREE +E + ++V LE
Sbjct: 385 SVRQLQMERDKYAENLKGESAMWRQRMQQMSEQVHTLREE-------KECSMSRVQELET 437
Query: 502 DI 503
+
Sbjct: 438 SL 439
>sp|O14578|CTRO_HUMAN Citron Rho-interacting kinase OS=Homo sapiens GN=CIT PE=1 SV=2
Length = 2027
Score = 35.4 bits (80), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 151/323 (46%), Gaps = 63/323 (19%)
Query: 241 LDDFRSLQRSNTELRKQ-LESQVLEIDKLRN---ENRVVVER----HEKEMKEMKESV-- 290
L D R R E+++Q ++QV E+ + N E+ V R +E E++E + +
Sbjct: 539 LHDIREQSRKLQEIKEQEYQAQVEEMRLMMNQLEEDLVSARRRSDLYESELRESRLAAEE 598
Query: 291 ----SISYLHQLKVLRDMLDAKQKELAEISRISAEQKHEMEDLNDRLSASMQSCTEANEI 346
+ H+L +D + E A++ +I+AEQ+ ++++L ++L ++++ TEA E+
Sbjct: 599 FKRKATECQHKLLKAKDQGKPEVGEYAKLEKINAEQQLKIQELQEKLEKAVKASTEATEL 658
Query: 347 MKSQKVTIDELKTQLDEERNLRRVDRENAEADLKAAVQKSQLETQEKLKRLSDAAS--RR 404
++ N+R+ +E AE +L EKL+ D++ R+
Sbjct: 659 LQ-----------------NIRQA-KERAEREL------------EKLQNREDSSEGIRK 688
Query: 405 ELEQQEVINKLQIAEKQSSLQVESLKLKLDETRERLVTSDNKVRLLETQVCKEQNVSASW 464
+L + E ++ EK QV + L++ +++ + K+++L+ Q+ K+ +
Sbjct: 689 KLVEAE-----ELEEKHREAQVSAQHLEV-HLKQKEQHYEEKIKVLDNQIKKDLADKETL 742
Query: 465 KKRVEELENEIKKLREELESEKAAREVAWAKVSGLELDI--------LAATRDLDFERRR 516
+ ++ E E + + L +KA +K+ LE I LAA L F +R
Sbjct: 743 ENMMQRHEEEAHEKGKILSEQKAMINAMDSKIRSLEQRIVELSEANKLAANSSL-FTQRN 801
Query: 517 LKAARERIMLRETQLRAFYSTTE 539
+KA E M+ E + + FY T+
Sbjct: 802 MKAQEE--MISELRQQKFYLETQ 822
>sp|Q96CN5|LRC45_HUMAN Leucine-rich repeat-containing protein 45 OS=Homo sapiens GN=LRRC45
PE=2 SV=1
Length = 670
Score = 34.3 bits (77), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 92/175 (52%), Gaps = 31/175 (17%)
Query: 371 DRENAEADLKAAVQKSQLETQEKLKRLSD-----AASRRE-----LEQQEVINKLQIAEK 420
+R AE +L A +++LE Q++L L D A +R E L+Q++V+ + Q
Sbjct: 479 ERGQAEEELIKAKSQARLEEQQRLAHLEDKLRLLAQARDEAQGACLQQKQVVAEAQTRVS 538
Query: 421 QSSLQVESLKLKLDETRERLVTSDNKVRLLETQVCKEQNVSASWKKRVEELENEIKKLRE 480
Q LQVE L+ +L+E ++ L D ++ V+ + RV EL+ + +L+
Sbjct: 539 QLGLQVEGLRRRLEELQQELSLKD------------QERVAEVSRVRV-ELQEQNGRLQA 585
Query: 481 ELESEKAAREVAWAKVSGLE--LDILAAT-RDLDFERRRLKAA-RERIMLRETQL 531
EL +++A RE K + LE L ++A+ R+ +R A+ RE++ LRE ++
Sbjct: 586 ELAAQEALRE----KAAALERQLKVMASDHREALLDRESENASLREKLRLREAEI 636
>sp|Q28298|RRBP1_CANFA Ribosome-binding protein 1 OS=Canis familiaris GN=RRBP1 PE=2 SV=1
Length = 1534
Score = 34.3 bits (77), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
Query: 411 VINKLQIAEK-QSSLQVESLKLKLDETRERLVTSDNKVRLLETQVCKEQNVSASWKKRV- 468
+ +KL+ AE+ Q++LQ E D+ R L ++ ++ L+ V +E+ V WK +V
Sbjct: 1239 LASKLREAEETQNNLQAE-----CDQYRTILAETEGMLKDLQKSVEEEEQV---WKAKVS 1290
Query: 469 -------------EELENEIKKLREELESEKAAREVAWAKVSGLELDILAATRDLDFERR 515
+ LE+ ++KL+ ELES + RE + LE + AA+ + +
Sbjct: 1291 ATEEELQKSRVTVKHLEDIVEKLKGELESSEQVREHTSHLEAELEKHMAAASAECQSYAK 1350
Query: 516 RLKAARERIMLRETQLRAFYSTTEEISVLFARQQEQLKAMQKTLED 561
+ R+ ++ ++QL A S ++ S A ++QL M+ +ED
Sbjct: 1351 EVAGLRQLLLESQSQLDAAKSEAQKQSNELALVRQQLSEMKSHVED 1396
>sp|Q9P2E9|RRBP1_HUMAN Ribosome-binding protein 1 OS=Homo sapiens GN=RRBP1 PE=1 SV=4
Length = 1410
Score = 33.9 bits (76), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 23/166 (13%)
Query: 411 VINKLQIAEK-QSSLQVESLKLKLDETRERLVTSDNKVRLLETQVCKEQNVSASWKKRV- 468
+ +KL+ AE+ QS+LQ E D+ R L ++ +R L+ V +E+ V W+ +V
Sbjct: 1110 LASKLREAEETQSTLQAE-----CDQYRSILAETEGMLRDLQKSVEEEEQV---WRAKVG 1161
Query: 469 -------------EELENEIKKLREELESEKAAREVAWAKVSGLELDILAATRDLDFERR 515
+ LE ++KL+ ELES RE + LE + AA+ + +
Sbjct: 1162 AAEEELQKSRVTVKHLEEIVEKLKGELESSDQVREHTSHLEAELEKHMAAASAECQNYAK 1221
Query: 516 RLKAARERIMLRETQLRAFYSTTEEISVLFARQQEQLKAMQKTLED 561
+ R+ ++ ++QL A S ++ S A ++QL M+ +ED
Sbjct: 1222 EVAGLRQLLLESQSQLDAAKSEAQKQSDELALVRQQLSEMKSHVED 1267
>sp|P14105|MYH9_CHICK Myosin-9 OS=Gallus gallus GN=MYH9 PE=2 SV=1
Length = 1959
Score = 33.9 bits (76), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 76/147 (51%), Gaps = 30/147 (20%)
Query: 416 QIAEKQSSLQVESLKLKLDETRERLVTSDNKVRLLETQVCKEQNVSASWKKRVEELENEI 475
QIAE Q+ Q+ LK++L + E L + +V + ++N++ K++ ELE++I
Sbjct: 1063 QIAELQA--QIAELKIQLSKKEEELQAALARVE----EEAAQKNMAL---KKIRELESQI 1113
Query: 476 KKLREELESEKAAREVAWAKVSGLELDILAATRDLDFERRRLKAARERIMLRETQLRAFY 535
+L+E+LESE+A+R A + RDL E LK T+L
Sbjct: 1114 TELQEDLESERASRNKAEKQ-----------KRDLGEELEALK----------TELEDTL 1152
Query: 536 STTEEISVLFARQQEQLKAMQKTLEDE 562
+T L +++++++ ++KTLEDE
Sbjct: 1153 DSTAAQQELRSKREQEVTVLKKTLEDE 1179
>sp|Q258K2|MYH9_CANFA Myosin-9 OS=Canis familiaris GN=MYH9 PE=2 SV=1
Length = 1960
Score = 33.1 bits (74), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 47/74 (63%), Gaps = 9/74 (12%)
Query: 416 QIAEKQSSLQVESLKLKLDETRERLVTSDNKVRLLETQVCKEQNVSASWKKRVEELENEI 475
QIAE Q+ Q+ LK++L + E L + +V TQ +N++ K++ ELE++I
Sbjct: 1063 QIAELQA--QIAELKMQLAKKEEELQAALARVEEEATQ----KNMAL---KKIRELESQI 1113
Query: 476 KKLREELESEKAAR 489
+L+E+LESE+A+R
Sbjct: 1114 SELQEDLESERASR 1127
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.308 0.125 0.349
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 332,645,578
Number of Sequences: 539616
Number of extensions: 14785236
Number of successful extensions: 96629
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 438
Number of HSP's successfully gapped in prelim test: 3526
Number of HSP's that attempted gapping in prelim test: 67669
Number of HSP's gapped (non-prelim): 17913
length of query: 895
length of database: 191,569,459
effective HSP length: 127
effective length of query: 768
effective length of database: 123,038,227
effective search space: 94493358336
effective search space used: 94493358336
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 66 (30.0 bits)