Query 002665
Match_columns 895
No_of_seqs 588 out of 4123
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 04:38:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002665.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002665hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR02468 sucrsPsyn_pln sucros 100.0 5E-123 1E-127 1097.7 79.2 877 5-890 168-1050(1050)
2 TIGR02470 sucr_synth sucrose s 100.0 3.7E-55 8.1E-60 511.5 42.3 460 5-505 254-745 (784)
3 PLN00142 sucrose synthase 100.0 3.3E-54 7.1E-59 503.1 37.0 459 5-505 278-768 (815)
4 TIGR02472 sucr_P_syn_N sucrose 100.0 2E-53 4.3E-58 488.9 43.1 438 7-506 1-439 (439)
5 PRK14501 putative bifunctional 100.0 6.5E-53 1.4E-57 509.3 43.0 551 128-845 119-703 (726)
6 PLN02205 alpha,alpha-trehalose 100.0 1.3E-52 2.9E-57 502.5 41.0 567 149-861 203-833 (854)
7 PLN03063 alpha,alpha-trehalose 100.0 3.9E-51 8.5E-56 491.1 45.2 534 148-837 148-722 (797)
8 PLN03064 alpha,alpha-trehalose 100.0 5.5E-49 1.2E-53 467.1 43.0 547 130-836 219-811 (934)
9 TIGR03449 mycothiol_MshA UDP-N 100.0 2.8E-40 6.1E-45 377.5 39.1 402 9-509 1-403 (405)
10 PRK00654 glgA glycogen synthas 100.0 3.7E-39 8.1E-44 373.0 37.6 445 7-510 1-465 (466)
11 cd03800 GT1_Sucrose_synthase T 100.0 1E-38 2.2E-43 363.3 38.4 396 8-502 1-397 (398)
12 PLN02939 transferase, transfer 100.0 3.1E-38 6.8E-43 369.7 41.6 453 5-511 480-970 (977)
13 PRK10307 putative glycosyl tra 100.0 2.7E-38 5.8E-43 361.8 39.4 399 7-511 1-411 (412)
14 PLN02316 synthase/transferase 100.0 4.6E-38 1E-42 375.7 41.3 423 5-509 586-1035(1036)
15 cd03796 GT1_PIG-A_like This fa 100.0 1E-37 2.2E-42 355.1 37.1 367 8-511 1-371 (398)
16 TIGR02095 glgA glycogen/starch 100.0 1.4E-37 2.9E-42 361.6 37.9 447 7-508 1-473 (473)
17 PLN02871 UDP-sulfoquinovose:DA 100.0 5.2E-37 1.1E-41 355.7 37.5 377 5-512 57-439 (465)
18 TIGR02149 glgA_Coryne glycogen 100.0 5.8E-37 1.3E-41 348.1 37.0 377 7-508 1-387 (388)
19 PRK14099 glycogen synthase; Pr 100.0 4.2E-36 9.2E-41 346.3 40.7 450 5-511 2-482 (485)
20 PRK14098 glycogen synthase; Pr 100.0 4.7E-36 1E-40 346.2 36.3 447 7-509 6-487 (489)
21 cd04962 GT1_like_5 This family 100.0 5.3E-35 1.1E-39 329.7 37.6 366 7-508 1-371 (371)
22 PRK15427 colanic acid biosynth 100.0 9.8E-35 2.1E-39 329.6 37.8 278 146-507 117-405 (406)
23 TIGR03088 stp2 sugar transfera 100.0 1.9E-34 4E-39 325.9 39.6 367 7-508 2-373 (374)
24 cd03791 GT1_Glycogen_synthase_ 100.0 9.1E-35 2E-39 339.1 33.4 444 8-506 1-475 (476)
25 cd03818 GT1_ExpC_like This fam 100.0 4E-34 8.7E-39 325.5 36.0 377 39-503 14-396 (396)
26 PRK15484 lipopolysaccharide 1, 100.0 1.8E-33 3.9E-38 317.4 37.7 370 7-509 3-379 (380)
27 cd03805 GT1_ALG2_like This fam 100.0 1.6E-33 3.5E-38 320.3 37.4 387 7-501 1-392 (392)
28 PRK15179 Vi polysaccharide bio 100.0 4E-33 8.6E-38 328.1 37.7 380 30-506 292-692 (694)
29 cd04955 GT1_like_6 This family 100.0 1.2E-32 2.5E-37 309.4 38.0 360 8-506 1-363 (363)
30 cd03819 GT1_WavL_like This fam 100.0 1E-32 2.2E-37 308.9 35.1 342 31-496 9-354 (355)
31 PF05116 S6PP: Sucrose-6F-phos 100.0 4.1E-34 8.9E-39 300.3 20.5 246 609-891 1-247 (247)
32 cd03813 GT1_like_3 This family 100.0 1.2E-31 2.6E-36 311.2 41.8 293 146-506 172-475 (475)
33 cd05844 GT1_like_7 Glycosyltra 100.0 1E-32 2.2E-37 310.6 31.4 278 146-503 81-366 (367)
34 PRK15490 Vi polysaccharide bio 100.0 4.5E-32 9.7E-37 304.1 33.4 304 126-507 266-575 (578)
35 cd03792 GT1_Trehalose_phosphor 100.0 1.1E-32 2.4E-37 311.1 28.1 286 146-508 84-372 (372)
36 cd03814 GT1_like_2 This family 100.0 9.6E-32 2.1E-36 301.0 34.5 362 8-506 1-364 (364)
37 cd03795 GT1_like_4 This family 100.0 3.4E-31 7.4E-36 296.6 35.4 353 8-498 1-357 (357)
38 cd03794 GT1_wbuB_like This fam 100.0 3E-31 6.6E-36 298.8 34.4 385 8-502 1-394 (394)
39 TIGR03087 stp1 sugar transfera 100.0 2.2E-31 4.9E-36 302.9 33.3 284 146-506 103-395 (397)
40 cd03816 GT1_ALG1_like This fam 100.0 4.7E-31 1E-35 301.0 34.9 380 32-498 14-407 (415)
41 cd03821 GT1_Bme6_like This fam 100.0 6E-31 1.3E-35 294.9 34.7 287 146-503 86-375 (375)
42 PLN02382 probable sucrose-phos 100.0 2.1E-32 4.5E-37 306.6 21.9 247 608-893 7-263 (413)
43 cd03802 GT1_AviGT4_like This f 100.0 6.6E-31 1.4E-35 291.8 33.8 332 7-506 1-335 (335)
44 cd03809 GT1_mtfB_like This fam 100.0 3.6E-31 7.7E-36 296.7 31.9 364 8-503 1-365 (365)
45 PLN02846 digalactosyldiacylgly 100.0 1.2E-30 2.6E-35 292.8 35.6 376 5-507 3-391 (462)
46 PRK09922 UDP-D-galactose:(gluc 100.0 3E-31 6.4E-36 297.7 30.6 347 7-510 1-358 (359)
47 cd03817 GT1_UGDG_like This fam 100.0 1.3E-30 2.8E-35 292.3 35.9 371 8-507 1-373 (374)
48 TIGR01485 SPP_plant-cyano sucr 100.0 8E-32 1.7E-36 285.5 23.9 242 610-892 1-249 (249)
49 cd03822 GT1_ecORF704_like This 100.0 2.7E-30 5.8E-35 289.7 37.1 356 8-506 1-366 (366)
50 cd03812 GT1_CapH_like This fam 100.0 7.1E-31 1.5E-35 294.4 32.2 336 30-489 10-346 (358)
51 PRK10125 putative glycosyl tra 100.0 9.9E-31 2.1E-35 295.8 33.0 368 7-508 1-405 (405)
52 cd04951 GT1_WbdM_like This fam 100.0 1.9E-30 4.2E-35 290.9 35.2 345 31-506 11-359 (360)
53 cd03799 GT1_amsK_like This is 100.0 1.6E-30 3.5E-35 290.8 34.4 268 146-500 78-354 (355)
54 PLN02949 transferase, transfer 100.0 7.2E-30 1.6E-34 291.4 40.0 390 31-511 46-460 (463)
55 cd03806 GT1_ALG11_like This fa 100.0 3E-30 6.5E-35 294.2 36.7 375 31-498 13-417 (419)
56 KOG1111 N-acetylglucosaminyltr 100.0 4.4E-32 9.6E-37 278.6 19.3 366 7-511 1-370 (426)
57 cd03807 GT1_WbnK_like This fam 100.0 4E-30 8.7E-35 287.0 36.7 351 31-506 11-365 (365)
58 cd03825 GT1_wcfI_like This fam 100.0 1.3E-30 2.9E-35 292.7 32.5 345 7-508 1-365 (365)
59 cd03820 GT1_amsD_like This fam 100.0 4.5E-30 9.7E-35 284.3 35.1 344 8-502 1-347 (348)
60 cd03801 GT1_YqgM_like This fam 100.0 5.8E-30 1.3E-34 285.3 35.4 372 8-506 1-374 (374)
61 KOG0853 Glycosyltransferase [C 100.0 4.3E-32 9.3E-37 298.3 17.2 386 20-508 63-468 (495)
62 cd03808 GT1_cap1E_like This fa 100.0 2.7E-29 5.9E-34 279.3 37.3 347 31-502 9-358 (359)
63 TIGR02400 trehalose_OtsA alpha 100.0 1.9E-30 4.1E-35 295.3 27.0 327 129-506 114-455 (456)
64 PRK10976 putative hydrolase; P 100.0 1.1E-31 2.3E-36 288.1 14.8 246 610-891 2-265 (266)
65 cd03823 GT1_ExpE7_like This fa 100.0 3.8E-29 8.2E-34 279.2 34.5 354 8-506 1-358 (359)
66 PRK10513 sugar phosphate phosp 100.0 1.7E-31 3.7E-36 287.3 14.3 248 610-890 3-268 (270)
67 COG0561 Cof Predicted hydrolas 100.0 7E-31 1.5E-35 281.3 18.9 234 609-892 2-263 (264)
68 cd03798 GT1_wlbH_like This fam 100.0 6.2E-29 1.3E-33 277.9 34.9 283 146-508 92-377 (377)
69 PRK15126 thiamin pyrimidine py 100.0 4.5E-31 9.7E-36 284.1 15.5 241 610-890 2-262 (272)
70 TIGR02471 sucr_syn_bact_C sucr 100.0 2.4E-30 5.3E-35 272.1 20.6 233 612-891 1-236 (236)
71 TIGR02398 gluc_glyc_Psyn gluco 100.0 1.7E-29 3.6E-34 285.0 26.1 313 148-507 133-482 (487)
72 PLN02275 transferase, transfer 100.0 6.4E-28 1.4E-32 271.4 32.8 336 29-472 13-371 (371)
73 cd03804 GT1_wbaZ_like This fam 100.0 5.5E-28 1.2E-32 270.6 30.5 265 146-501 82-350 (351)
74 cd03811 GT1_WabH_like This fam 100.0 1.4E-27 2.9E-32 264.8 33.3 268 146-493 80-352 (353)
75 cd04946 GT1_AmsK_like This fam 100.0 2.3E-28 4.9E-33 278.3 27.7 276 146-502 126-406 (407)
76 PRK10117 trehalose-6-phosphate 100.0 8.5E-29 1.8E-33 275.7 22.7 332 127-511 108-457 (474)
77 PLN02887 hydrolase family prot 100.0 1.7E-29 3.6E-34 290.8 16.9 249 606-889 304-578 (580)
78 cd03788 GT1_TPS Trehalose-6-Ph 100.0 1E-28 2.2E-33 283.8 22.1 360 94-505 68-459 (460)
79 TIGR02918 accessory Sec system 100.0 1.7E-27 3.7E-32 274.6 31.5 281 146-508 210-500 (500)
80 KOG1050 Trehalose-6-phosphate 100.0 4.8E-27 1E-31 273.3 35.3 552 148-864 141-725 (732)
81 PRK03669 mannosyl-3-phosphogly 100.0 1E-28 2.2E-33 265.1 19.2 243 608-890 5-268 (271)
82 PRK01158 phosphoglycolate phos 100.0 1.2E-28 2.6E-33 258.6 18.8 225 610-891 3-230 (230)
83 TIGR01482 SPP-subfamily Sucros 100.0 3.3E-29 7.2E-34 262.0 13.7 218 613-890 1-225 (225)
84 PLN02501 digalactosyldiacylgly 100.0 1.2E-26 2.6E-31 262.1 34.7 364 29-506 334-708 (794)
85 PF00862 Sucrose_synth: Sucros 100.0 2.7E-29 5.8E-34 271.2 12.1 244 8-282 274-531 (550)
86 COG0297 GlgA Glycogen synthase 100.0 8.5E-27 1.8E-31 261.6 31.4 449 7-512 1-482 (487)
87 cd03793 GT1_Glycogen_synthase_ 100.0 1.1E-26 2.3E-31 261.0 29.7 325 146-510 147-589 (590)
88 PRK10530 pyridoxal phosphate ( 100.0 5.9E-28 1.3E-32 260.2 16.0 247 610-890 3-271 (272)
89 PHA01630 putative group 1 glyc 99.9 2.2E-26 4.7E-31 252.6 25.8 255 153-507 52-330 (331)
90 TIGR01486 HAD-SF-IIB-MPGP mann 99.9 3.6E-27 7.8E-32 251.1 18.7 233 612-889 1-255 (256)
91 PF08282 Hydrolase_3: haloacid 99.9 7.9E-28 1.7E-32 256.0 13.1 222 613-886 1-254 (254)
92 COG0380 OtsA Trehalose-6-phosp 99.9 8.2E-26 1.8E-30 250.0 26.9 330 127-507 132-479 (486)
93 PF00982 Glyco_transf_20: Glyc 99.9 9.5E-27 2.1E-31 263.6 19.9 326 130-507 129-474 (474)
94 cd04949 GT1_gtfA_like This fam 99.9 1E-25 2.2E-30 254.4 27.5 274 146-501 98-372 (372)
95 PHA01633 putative glycosyl tra 99.9 3.7E-25 8.1E-30 239.6 29.9 221 216-503 90-335 (335)
96 TIGR00099 Cof-subfamily Cof su 99.9 1.1E-26 2.4E-31 247.7 15.0 233 612-886 1-256 (256)
97 PRK00726 murG undecaprenyldiph 99.9 7.4E-25 1.6E-29 245.9 29.1 335 31-506 11-356 (357)
98 TIGR01487 SPP-like sucrose-pho 99.9 2.4E-26 5.2E-31 238.3 15.0 212 610-886 1-215 (215)
99 cd03785 GT1_MurG MurG is an N- 99.9 8.4E-24 1.8E-28 236.7 28.9 330 31-499 9-349 (350)
100 TIGR01133 murG undecaprenyldip 99.9 1.1E-23 2.3E-28 235.6 28.1 327 31-499 10-346 (348)
101 PRK00192 mannosyl-3-phosphogly 99.9 9.8E-25 2.1E-29 234.5 18.3 242 609-889 3-269 (273)
102 PRK10187 trehalose-6-phosphate 99.9 2.8E-23 6E-28 220.9 16.8 196 608-845 12-223 (266)
103 PRK05749 3-deoxy-D-manno-octul 99.9 2.7E-21 5.9E-26 222.1 28.3 284 146-510 123-422 (425)
104 PRK14502 bifunctional mannosyl 99.9 5E-21 1.1E-25 218.6 26.0 250 603-889 409-689 (694)
105 PTZ00174 phosphomannomutase; P 99.9 1.9E-21 4.1E-26 205.5 18.7 207 608-845 3-234 (247)
106 TIGR02463 MPGP_rel mannosyl-3- 99.9 1.3E-21 2.8E-26 203.8 16.2 203 612-841 1-220 (221)
107 PRK13609 diacylglycerol glucos 99.9 1.2E-19 2.7E-24 205.3 31.0 264 146-508 103-372 (380)
108 cd04950 GT1_like_1 Glycosyltra 99.9 1.1E-19 2.4E-24 204.9 30.3 264 147-507 102-371 (373)
109 TIGR01484 HAD-SF-IIB HAD-super 99.8 1.1E-20 2.3E-25 194.4 15.1 195 612-841 1-204 (204)
110 PLN02605 monogalactosyldiacylg 99.8 4.1E-19 8.8E-24 200.8 29.1 265 146-506 99-380 (382)
111 PRK13608 diacylglycerol glucos 99.8 2.7E-19 5.8E-24 202.6 27.5 268 146-512 103-376 (391)
112 PLN02580 trehalose-phosphatase 99.8 3.7E-20 8E-25 201.4 18.5 218 608-861 117-365 (384)
113 PF00534 Glycos_transf_1: Glyc 99.8 3E-20 6.4E-25 185.6 13.5 162 311-488 10-172 (172)
114 TIGR02461 osmo_MPG_phos mannos 99.8 2.1E-19 4.6E-24 186.3 13.3 208 612-842 1-225 (225)
115 TIGR00685 T6PP trehalose-phosp 99.8 6.4E-19 1.4E-23 185.8 16.2 194 608-842 1-217 (244)
116 KOG1387 Glycosyltransferase [C 99.8 1.1E-16 2.4E-21 164.1 31.1 390 30-511 55-462 (465)
117 PLN03017 trehalose-phosphatase 99.8 4.1E-18 8.9E-23 183.7 17.8 216 608-861 109-347 (366)
118 PLN02423 phosphomannomutase 99.8 4.7E-18 1E-22 178.7 16.9 203 608-845 5-234 (245)
119 PRK12702 mannosyl-3-phosphogly 99.8 2.4E-17 5.3E-22 170.8 20.6 252 610-889 1-293 (302)
120 cd01635 Glycosyltransferase_GT 99.8 5.6E-17 1.2E-21 168.6 21.3 119 321-456 109-229 (229)
121 KOG2941 Beta-1,4-mannosyltrans 99.8 2.3E-15 4.9E-20 154.9 32.0 377 37-499 28-433 (444)
122 COG0438 RfaG Glycosyltransfera 99.7 1.4E-15 3.1E-20 167.7 30.3 290 148-510 84-379 (381)
123 TIGR00236 wecB UDP-N-acetylglu 99.7 5.6E-17 1.2E-21 182.5 19.1 289 124-503 70-363 (365)
124 PLN02151 trehalose-phosphatase 99.7 4.6E-17 9.9E-22 175.2 17.3 218 608-861 96-333 (354)
125 PRK00025 lpxB lipid-A-disaccha 99.7 1.2E-15 2.7E-20 172.7 25.3 340 30-508 10-374 (380)
126 PRK09814 beta-1,6-galactofuran 99.7 1.5E-15 3.3E-20 168.2 25.4 246 146-500 62-324 (333)
127 TIGR02094 more_P_ylases alpha- 99.7 9.8E-16 2.1E-20 178.8 23.5 334 146-505 160-598 (601)
128 PF02358 Trehalose_PPase: Treh 99.7 5.4E-17 1.2E-21 170.3 9.0 210 614-861 1-233 (235)
129 COG1877 OtsB Trehalose-6-phosp 99.7 3.8E-16 8.2E-21 162.1 14.8 195 606-836 14-218 (266)
130 cd03786 GT1_UDP-GlcNAc_2-Epime 99.7 2.9E-15 6.3E-20 168.6 21.1 249 146-481 87-344 (363)
131 PF05693 Glycogen_syn: Glycoge 99.6 1.8E-13 4E-18 153.4 23.0 326 148-512 144-586 (633)
132 cd04299 GT1_Glycogen_Phosphory 99.6 7.2E-13 1.6E-17 157.3 26.3 187 312-506 474-688 (778)
133 TIGR03713 acc_sec_asp1 accesso 99.5 6.9E-13 1.5E-17 153.3 19.9 167 318-504 321-518 (519)
134 TIGR00215 lpxB lipid-A-disacch 99.4 3.3E-11 7.3E-16 135.9 24.5 327 30-490 14-367 (385)
135 PF13692 Glyco_trans_1_4: Glyc 99.4 2.6E-13 5.6E-18 129.5 6.0 131 316-474 2-135 (135)
136 PRK12446 undecaprenyldiphospho 99.4 2.9E-10 6.2E-15 126.6 29.8 308 31-479 11-330 (352)
137 COG0707 MurG UDP-N-acetylgluco 99.4 5.9E-10 1.3E-14 122.7 30.9 334 31-504 10-354 (357)
138 PF13439 Glyco_transf_4: Glyco 99.4 3.9E-12 8.4E-17 126.7 12.7 169 29-279 9-177 (177)
139 PF13579 Glyco_trans_4_4: Glyc 99.4 1.7E-12 3.8E-17 126.9 9.9 160 32-272 1-160 (160)
140 COG3769 Predicted hydrolase (H 99.3 3.6E-11 7.7E-16 116.6 13.7 252 608-890 5-271 (274)
141 PF13524 Glyco_trans_1_2: Glyc 99.3 2.2E-11 4.8E-16 107.8 9.8 91 411-503 1-92 (92)
142 PF09314 DUF1972: Domain of un 99.2 2.1E-09 4.6E-14 105.9 20.2 181 7-274 2-185 (185)
143 TIGR02919 accessory Sec system 99.1 9.6E-09 2.1E-13 116.3 24.6 194 217-495 238-432 (438)
144 TIGR01670 YrbI-phosphatas 3-de 99.1 3.2E-10 6.9E-15 110.6 7.8 75 797-892 76-151 (154)
145 PRK11133 serB phosphoserine ph 99.0 1.5E-10 3.3E-15 125.8 2.3 70 795-886 246-315 (322)
146 cd03784 GT1_Gtf_like This fami 99.0 3E-08 6.5E-13 113.3 21.1 127 314-475 238-373 (401)
147 PF08323 Glyco_transf_5: Starc 99.0 8.3E-10 1.8E-14 116.3 6.7 208 8-237 1-234 (245)
148 TIGR03492 conserved hypothetic 98.9 3.4E-07 7.5E-12 103.5 27.8 152 327-503 219-394 (396)
149 TIGR01426 MGT glycosyltransfer 98.9 8.9E-07 1.9E-11 100.8 30.9 112 383-505 273-390 (392)
150 TIGR02726 phenyl_P_delta pheny 98.9 1.5E-09 3.4E-14 106.5 6.7 71 797-888 82-153 (169)
151 COG1519 KdtA 3-deoxy-D-manno-o 98.9 1.6E-06 3.5E-11 94.4 28.8 258 146-490 122-402 (419)
152 PRK09484 3-deoxy-D-manno-octul 98.8 3.5E-09 7.7E-14 106.4 4.8 68 798-886 97-164 (183)
153 TIGR03568 NeuC_NnaA UDP-N-acet 98.8 1.2E-06 2.6E-11 98.2 24.5 279 124-504 77-364 (365)
154 TIGR00661 MJ1255 conserved hyp 98.7 1.5E-06 3.3E-11 95.9 22.6 82 384-475 228-315 (321)
155 PF13528 Glyco_trans_1_3: Glyc 98.7 1.5E-06 3.2E-11 95.9 20.7 119 314-471 191-317 (318)
156 smart00775 LNS2 LNS2 domain. T 98.6 1.2E-07 2.6E-12 92.3 6.9 67 612-685 1-89 (157)
157 PF13477 Glyco_trans_4_2: Glyc 98.5 1.8E-06 4E-11 82.5 14.2 127 36-226 11-139 (139)
158 COG1778 Low specificity phosph 98.4 1.3E-07 2.8E-12 87.8 3.5 64 797-881 83-146 (170)
159 TIGR03590 PseG pseudaminic aci 98.4 2.3E-05 5.1E-10 84.4 20.8 98 316-440 171-268 (279)
160 COG0560 SerB Phosphoserine pho 98.3 2.5E-06 5.5E-11 87.4 10.6 52 788-842 135-186 (212)
161 COG4641 Uncharacterized protei 98.3 0.00011 2.3E-09 79.1 23.0 124 382-511 234-365 (373)
162 TIGR01457 HAD-SF-IIA-hyp2 HAD- 98.3 4.1E-06 8.9E-11 88.6 11.1 70 611-685 2-76 (249)
163 KOG3189 Phosphomannomutase [Li 98.3 1.1E-05 2.3E-10 77.7 12.6 200 608-834 9-228 (252)
164 cd01427 HAD_like Haloacid deha 98.2 1.9E-06 4.2E-11 81.5 6.7 52 612-667 1-63 (139)
165 PF02350 Epimerase_2: UDP-N-ac 98.2 1E-05 2.2E-10 89.7 13.3 272 146-505 66-345 (346)
166 PHA03392 egt ecdysteroid UDP-g 98.2 0.00039 8.4E-09 81.2 26.3 137 316-488 297-446 (507)
167 PF04007 DUF354: Protein of un 98.2 0.00072 1.6E-08 74.0 26.2 66 397-473 241-309 (335)
168 PLN02448 UDP-glycosyltransfera 98.2 0.0016 3.5E-08 75.3 30.3 93 385-486 323-428 (459)
169 COG1819 Glycosyl transferases, 98.1 0.00016 3.4E-09 82.1 20.5 108 381-499 280-393 (406)
170 TIGR01689 EcbF-BcbF capsule bi 98.1 6.7E-06 1.4E-10 76.1 6.6 54 611-668 2-79 (126)
171 KOG3742 Glycogen synthase [Car 98.1 0.00028 6.1E-09 76.1 18.8 108 397-509 493-614 (692)
172 PLN03007 UDP-glucosyltransfera 98.0 0.0065 1.4E-07 70.8 31.1 134 315-475 285-441 (482)
173 PF13844 Glyco_transf_41: Glyc 98.0 6.5E-05 1.4E-09 84.8 13.8 186 303-508 272-467 (468)
174 TIGR01684 viral_ppase viral ph 98.0 1.5E-05 3.3E-10 83.5 8.0 72 608-685 124-201 (301)
175 COG0381 WecB UDP-N-acetylgluco 98.0 0.0011 2.4E-08 72.1 21.4 287 126-506 78-369 (383)
176 PLN02208 glycosyltransferase f 97.9 0.022 4.7E-07 65.4 33.0 112 386-506 312-438 (442)
177 PLN02670 transferase, transfer 97.9 0.028 6E-07 64.9 32.5 114 387-509 341-467 (472)
178 COG4671 Predicted glycosyl tra 97.9 0.0074 1.6E-07 64.3 24.9 338 5-473 8-364 (400)
179 PF03332 PMM: Eukaryotic phosp 97.8 2.5E-05 5.4E-10 78.2 4.4 185 630-845 2-209 (220)
180 PRK10444 UMP phosphatase; Prov 97.7 0.00048 1E-08 72.7 14.0 66 611-681 2-72 (248)
181 PLN02764 glycosyltransferase f 97.7 0.052 1.1E-06 62.2 31.2 114 387-509 319-447 (453)
182 PHA03398 viral phosphatase sup 97.7 8.4E-05 1.8E-09 78.1 7.8 72 608-685 126-203 (303)
183 PLN02562 UDP-glycosyltransfera 97.7 0.046 1E-06 63.0 30.7 138 316-480 274-419 (448)
184 PLN02863 UDP-glucoronosyl/UDP- 97.7 0.094 2E-06 60.9 32.8 169 316-506 284-470 (477)
185 PLN02992 coniferyl-alcohol glu 97.6 0.075 1.6E-06 61.5 31.3 120 386-514 339-476 (481)
186 PLN00414 glycosyltransferase f 97.6 0.16 3.4E-06 58.5 32.9 114 387-509 314-442 (446)
187 TIGR00338 serB phosphoserine p 97.6 0.00046 1E-08 71.6 11.1 43 797-842 152-194 (219)
188 PLN02173 UDP-glucosyl transfer 97.5 0.34 7.5E-06 55.6 34.5 82 385-475 317-409 (449)
189 PLN02410 UDP-glucoronosyl/UDP- 97.4 0.28 6.1E-06 56.5 31.8 83 385-476 324-412 (451)
190 COG3914 Spy Predicted O-linked 97.4 0.017 3.7E-07 65.4 20.4 182 309-510 423-616 (620)
191 PLN02554 UDP-glycosyltransfera 97.4 0.31 6.7E-06 56.8 32.1 83 385-476 342-443 (481)
192 PLN02210 UDP-glucosyl transfer 97.4 0.45 9.8E-06 55.0 33.0 82 386-476 325-417 (456)
193 COG3980 spsG Spore coat polysa 97.4 0.0089 1.9E-07 61.8 16.6 138 315-483 158-302 (318)
194 PRK02797 4-alpha-L-fucosyltran 97.3 0.033 7.2E-07 59.0 20.6 168 317-510 146-319 (322)
195 PRK10017 colanic acid biosynth 97.3 0.51 1.1E-05 53.9 32.3 91 390-489 313-407 (426)
196 PF07429 Glyco_transf_56: 4-al 97.3 0.028 6.1E-07 60.4 20.1 143 315-472 184-331 (360)
197 PF11997 DUF3492: Domain of un 97.2 0.014 3E-07 62.2 17.3 85 147-233 172-260 (268)
198 TIGR01681 HAD-SF-IIIC HAD-supe 97.2 0.0005 1.1E-08 64.7 5.5 52 611-666 1-68 (128)
199 PF12000 Glyco_trans_4_3: Gkyc 97.2 0.0043 9.3E-08 60.8 11.9 144 93-278 19-170 (171)
200 PLN02167 UDP-glycosyltransfera 97.2 0.75 1.6E-05 53.6 32.7 134 316-475 281-435 (475)
201 PLN00164 glucosyltransferase; 97.2 0.63 1.4E-05 54.2 31.8 92 387-487 341-445 (480)
202 PRK10671 copA copper exporting 97.2 0.002 4.2E-08 80.5 12.0 56 608-667 628-689 (834)
203 COG1817 Uncharacterized protei 97.2 0.042 9.1E-07 57.8 19.2 138 305-477 171-317 (346)
204 TIGR01106 ATPase-IIC_X-K sodiu 97.1 0.0055 1.2E-07 77.7 15.3 42 622-667 566-607 (997)
205 TIGR01458 HAD-SF-IIA-hyp3 HAD- 97.1 0.00024 5.2E-09 75.6 2.7 64 611-679 2-74 (257)
206 PLN02555 limonoid glucosyltran 97.0 1 2.2E-05 52.3 34.3 93 385-487 337-441 (480)
207 PF02684 LpxB: Lipid-A-disacch 97.0 0.067 1.5E-06 59.6 20.9 145 312-480 180-346 (373)
208 PLN02645 phosphoglycolate phos 97.0 0.0009 1.9E-08 73.3 5.7 67 608-679 26-97 (311)
209 PLN02152 indole-3-acetate beta 97.0 0.53 1.1E-05 54.3 28.2 146 315-476 261-419 (455)
210 TIGR01497 kdpB K+-transporting 97.0 0.0075 1.6E-07 72.0 13.3 56 608-667 424-485 (675)
211 TIGR01662 HAD-SF-IIIA HAD-supe 97.0 0.00089 1.9E-08 63.3 4.6 53 611-667 1-72 (132)
212 PLN03015 UDP-glucosyl transfer 96.9 0.99 2.1E-05 52.1 29.6 78 387-473 337-425 (470)
213 PF04464 Glyphos_transf: CDP-G 96.9 0.05 1.1E-06 61.3 19.2 270 148-505 79-367 (369)
214 TIGR01664 DNA-3'-Pase DNA 3'-p 96.9 0.0017 3.6E-08 64.1 5.7 65 608-679 11-102 (166)
215 PLN03004 UDP-glycosyltransfera 96.8 0.81 1.8E-05 52.7 27.6 80 386-476 335-426 (451)
216 PRK13223 phosphoglycolate phos 96.8 0.0093 2E-07 64.0 11.1 51 792-845 153-204 (272)
217 PLN02954 phosphoserine phospha 96.7 0.011 2.5E-07 61.3 10.9 44 793-841 151-194 (224)
218 COG0647 NagD Predicted sugar p 96.6 0.023 5E-07 60.0 12.4 67 608-679 6-78 (269)
219 TIGR01452 PGP_euk phosphoglyco 96.6 0.0024 5.3E-08 68.9 5.0 67 610-681 2-73 (279)
220 PF13344 Hydrolase_6: Haloacid 96.6 0.0034 7.4E-08 56.2 5.0 52 613-668 1-57 (101)
221 COG0058 GlgP Glucan phosphoryl 96.5 0.03 6.5E-07 66.4 13.9 191 312-510 483-685 (750)
222 PF08235 LNS2: LNS2 (Lipin/Ned 96.5 0.0067 1.4E-07 58.2 6.6 50 612-665 1-67 (157)
223 TIGR01647 ATPase-IIIA_H plasma 96.5 0.024 5.3E-07 69.7 13.2 56 608-667 415-481 (755)
224 TIGR01511 ATPase-IB1_Cu copper 96.4 0.013 2.7E-07 69.8 10.2 55 609-667 384-444 (562)
225 PRK13222 phosphoglycolate phos 96.4 0.016 3.6E-07 60.2 10.0 46 797-845 150-196 (226)
226 COG0763 LpxB Lipid A disacchar 96.4 0.38 8.2E-06 52.8 20.1 153 306-485 178-355 (381)
227 PRK13226 phosphoglycolate phos 96.4 0.0083 1.8E-07 62.7 7.3 40 798-840 153-192 (229)
228 TIGR01517 ATPase-IIB_Ca plasma 96.3 0.049 1.1E-06 68.9 15.2 42 622-667 577-618 (941)
229 TIGR01524 ATPase-IIIB_Mg magne 96.3 0.067 1.4E-06 66.9 15.8 42 622-667 513-554 (867)
230 PRK01021 lpxB lipid-A-disaccha 96.3 0.74 1.6E-05 54.0 23.0 154 307-488 404-585 (608)
231 TIGR01672 AphA HAD superfamily 96.2 0.014 3E-07 60.8 8.0 36 629-668 119-158 (237)
232 TIGR01657 P-ATPase-V P-type AT 96.2 0.021 4.5E-07 73.0 11.2 41 623-667 655-695 (1054)
233 PRK10517 magnesium-transportin 96.2 0.067 1.5E-06 67.0 15.2 42 622-667 548-589 (902)
234 PRK01122 potassium-transportin 96.2 0.039 8.5E-07 66.1 12.6 55 609-667 424-484 (679)
235 PRK11590 hypothetical protein; 96.2 0.028 6E-07 57.9 10.0 47 790-842 156-202 (211)
236 PF06258 Mito_fiss_Elm1: Mitoc 96.2 0.18 3.9E-06 54.9 16.7 194 146-442 56-259 (311)
237 TIGR01523 ATPase-IID_K-Na pota 96.2 0.061 1.3E-06 68.4 14.9 41 623-667 645-685 (1053)
238 PRK11033 zntA zinc/cadmium/mer 96.2 0.029 6.3E-07 68.8 11.6 56 608-667 546-607 (741)
239 TIGR01525 ATPase-IB_hvy heavy 96.2 0.015 3.3E-07 69.2 8.9 57 608-667 362-424 (556)
240 PRK13225 phosphoglycolate phos 96.2 0.043 9.4E-07 58.8 11.5 42 797-841 196-237 (273)
241 TIGR01116 ATPase-IIA1_Ca sarco 96.1 0.025 5.5E-07 71.2 11.2 41 623-667 536-576 (917)
242 TIGR01522 ATPase-IIA2_Ca golgi 96.0 0.09 2E-06 66.1 15.3 56 608-667 501-567 (884)
243 PRK15122 magnesium-transportin 96.0 0.096 2.1E-06 65.7 15.0 42 622-667 548-589 (903)
244 COG3660 Predicted nucleoside-d 95.9 0.99 2.1E-05 46.5 18.9 200 146-442 69-275 (329)
245 TIGR01675 plant-AP plant acid 95.7 0.025 5.5E-07 58.1 7.0 56 608-667 75-162 (229)
246 PRK14010 potassium-transportin 95.7 0.077 1.7E-06 63.6 12.1 54 610-667 421-480 (673)
247 PRK10826 2-deoxyglucose-6-phos 95.7 0.082 1.8E-06 54.9 11.1 45 795-842 147-191 (222)
248 TIGR01512 ATPase-IB2_Cd heavy 95.7 0.029 6.3E-07 66.4 8.3 54 610-667 342-402 (536)
249 TIGR01460 HAD-SF-IIA Haloacid 95.6 0.0087 1.9E-07 62.8 3.5 67 613-684 1-73 (236)
250 TIGR01656 Histidinol-ppas hist 95.6 0.015 3.3E-07 56.1 4.8 53 611-667 1-81 (147)
251 PRK13288 pyrophosphatase PpaX; 95.6 0.067 1.4E-06 55.2 10.0 45 793-840 135-179 (214)
252 PF08288 PIGA: PIGA (GPI ancho 95.6 0.029 6.4E-07 47.5 5.6 36 146-181 49-86 (90)
253 TIGR01459 HAD-SF-IIA-hyp4 HAD- 95.6 0.016 3.5E-07 61.1 5.2 67 608-678 6-76 (242)
254 PRK13582 thrH phosphoserine ph 95.6 0.056 1.2E-06 55.3 9.0 40 797-843 132-171 (205)
255 TIGR01685 MDP-1 magnesium-depe 95.3 0.031 6.7E-07 55.3 5.7 54 610-667 2-85 (174)
256 PRK14986 glycogen phosphorylas 95.2 0.083 1.8E-06 63.6 9.9 148 311-467 538-703 (815)
257 TIGR02093 P_ylase glycogen/sta 94.9 0.064 1.4E-06 64.4 8.0 148 311-467 522-687 (794)
258 COG0474 MgtA Cation transport 94.9 0.073 1.6E-06 66.9 8.8 42 622-667 545-586 (917)
259 PLN02575 haloacid dehalogenase 94.9 0.15 3.3E-06 56.8 10.3 41 798-841 274-314 (381)
260 COG2217 ZntA Cation transport 94.9 0.14 3.1E-06 61.6 10.7 52 612-667 519-576 (713)
261 PLN02770 haloacid dehalogenase 94.8 0.42 9E-06 50.6 13.2 42 797-841 165-206 (248)
262 TIGR01261 hisB_Nterm histidino 94.8 0.051 1.1E-06 53.2 5.6 54 610-667 1-83 (161)
263 PRK08942 D,D-heptose 1,7-bisph 94.7 0.051 1.1E-06 54.4 5.7 42 609-654 2-55 (181)
264 TIGR01449 PGP_bact 2-phosphogl 94.7 0.11 2.5E-06 53.3 8.4 41 798-841 143-183 (213)
265 COG0546 Gph Predicted phosphat 94.6 0.15 3.2E-06 52.9 9.1 43 798-843 147-192 (220)
266 PLN02534 UDP-glycosyltransfera 94.6 12 0.00026 43.7 36.9 77 386-473 345-443 (491)
267 PF04101 Glyco_tran_28_C: Glyc 94.5 0.023 4.9E-07 56.1 2.5 90 385-484 55-154 (167)
268 TIGR01663 PNK-3'Pase polynucle 94.5 0.06 1.3E-06 62.6 6.3 65 608-679 166-257 (526)
269 cd04300 GT1_Glycogen_Phosphory 94.5 0.17 3.7E-06 61.0 10.1 149 311-466 525-689 (797)
270 TIGR01533 lipo_e_P4 5'-nucleot 94.5 0.099 2.2E-06 55.4 7.3 67 608-678 73-171 (266)
271 PHA02530 pseT polynucleotide k 94.4 0.044 9.5E-07 59.8 4.7 56 608-667 156-226 (300)
272 TIGR01668 YqeG_hyp_ppase HAD s 94.4 0.072 1.6E-06 52.8 5.7 56 608-667 23-83 (170)
273 TIGR00213 GmhB_yaeD D,D-heptos 94.4 0.074 1.6E-06 53.0 5.8 40 611-654 2-52 (176)
274 TIGR01491 HAD-SF-IB-PSPlk HAD- 94.2 0.034 7.5E-07 56.5 3.1 45 796-843 146-190 (201)
275 PRK11009 aphA acid phosphatase 93.9 0.17 3.6E-06 52.8 7.4 35 629-667 119-157 (237)
276 TIGR01686 FkbH FkbH-like domai 93.8 0.12 2.7E-06 56.8 6.7 55 609-667 2-74 (320)
277 TIGR01990 bPGM beta-phosphoglu 93.8 0.37 7.9E-06 48.2 9.7 41 796-839 141-181 (185)
278 COG2179 Predicted hydrolase of 93.8 0.16 3.5E-06 48.6 6.4 57 608-668 26-86 (175)
279 PLN03243 haloacid dehalogenase 93.8 0.4 8.6E-06 51.1 10.3 41 798-841 167-207 (260)
280 PRK11587 putative phosphatase; 93.7 0.66 1.4E-05 47.9 11.6 44 798-844 140-184 (218)
281 KOG0203 Na+/K+ ATPase, alpha s 93.4 0.56 1.2E-05 55.7 11.2 153 624-855 590-743 (1019)
282 PLN02779 haloacid dehalogenase 93.4 0.19 4.1E-06 54.4 7.2 41 799-842 205-245 (286)
283 PF12038 DUF3524: Domain of un 93.4 0.42 9.2E-06 46.1 8.5 78 146-235 58-136 (168)
284 PRK08238 hypothetical protein; 93.3 0.19 4E-06 58.2 7.3 48 627-682 75-122 (479)
285 PF00201 UDPGT: UDP-glucoronos 93.1 0.25 5.5E-06 58.1 8.3 84 385-477 323-412 (500)
286 smart00577 CPDc catalytic doma 93.1 0.19 4.1E-06 48.5 5.9 54 609-667 1-83 (148)
287 KOG0210 P-type ATPase [Inorgan 92.9 0.6 1.3E-05 54.1 10.2 39 797-841 768-806 (1051)
288 PRK14985 maltodextrin phosphor 92.9 0.2 4.3E-06 60.2 6.8 147 311-466 524-688 (798)
289 PRK06769 hypothetical protein; 92.9 0.14 3.1E-06 50.8 4.9 56 608-667 2-75 (173)
290 KOG0202 Ca2+ transporting ATPa 92.9 0.65 1.4E-05 55.3 10.7 55 608-667 569-623 (972)
291 PF00343 Phosphorylase: Carboh 92.7 0.93 2E-05 54.1 11.9 149 311-466 439-603 (713)
292 TIGR01490 HAD-SF-IB-hyp1 HAD-s 92.6 0.08 1.7E-06 53.9 2.8 48 792-842 150-197 (202)
293 PRK05446 imidazole glycerol-ph 92.6 0.2 4.3E-06 55.4 5.9 55 609-667 1-84 (354)
294 PRK14089 ipid-A-disaccharide s 92.3 4.6 0.0001 44.8 16.2 34 397-439 228-261 (347)
295 TIGR02253 CTE7 HAD superfamily 92.3 0.82 1.8E-05 47.2 9.9 42 798-842 152-195 (221)
296 TIGR01456 CECR5 HAD-superfamil 91.8 0.28 6E-06 54.1 5.9 53 612-668 2-64 (321)
297 PLN02940 riboflavin kinase 91.7 1.2 2.5E-05 50.4 10.9 42 798-842 152-194 (382)
298 TIGR01428 HAD_type_II 2-haloal 91.5 1.1 2.3E-05 45.4 9.6 41 798-841 150-190 (198)
299 TIGR01488 HAD-SF-IB Haloacid D 91.5 0.098 2.1E-06 51.9 1.8 42 791-835 136-177 (177)
300 TIGR01680 Veg_Stor_Prot vegeta 91.4 0.52 1.1E-05 49.6 6.9 54 610-667 101-187 (275)
301 PRK09552 mtnX 2-hydroxy-3-keto 91.4 0.32 6.8E-06 50.4 5.5 38 796-840 147-184 (219)
302 PRK10422 lipopolysaccharide co 91.3 28 0.0006 38.8 24.1 105 315-440 183-289 (352)
303 PF11440 AGT: DNA alpha-glucos 90.9 8.3 0.00018 40.3 14.7 145 315-475 179-354 (355)
304 PF12689 Acid_PPase: Acid Phos 90.8 0.28 6E-06 48.2 4.2 54 610-667 3-85 (169)
305 PF08645 PNK3P: Polynucleotide 90.7 0.17 3.8E-06 49.4 2.6 53 611-667 1-82 (159)
306 TIGR01422 phosphonatase phosph 90.4 1.1 2.3E-05 47.5 8.6 43 798-843 158-202 (253)
307 PTZ00445 p36-lilke protein; Pr 90.3 0.39 8.5E-06 48.3 4.7 50 791-843 156-206 (219)
308 TIGR02137 HSK-PSP phosphoserin 90.2 0.31 6.6E-06 49.8 4.0 53 794-856 129-181 (203)
309 COG3882 FkbH Predicted enzyme 90.1 1 2.2E-05 50.4 8.0 55 608-666 220-293 (574)
310 TIGR02252 DREG-2 REG-2-like, H 90.0 0.42 9E-06 48.7 4.9 38 799-839 163-201 (203)
311 PF03767 Acid_phosphat_B: HAD 90.0 0.26 5.7E-06 51.2 3.5 56 608-667 70-157 (229)
312 PF05152 DUF705: Protein of un 89.7 1 2.2E-05 47.2 7.3 67 608-679 120-192 (297)
313 TIGR01489 DKMTPPase-SF 2,3-dik 89.6 0.6 1.3E-05 46.6 5.6 40 793-838 145-184 (188)
314 TIGR01544 HAD-SF-IE haloacid d 88.9 2.8 6E-05 44.7 10.1 38 795-835 190-230 (277)
315 TIGR02247 HAD-1A3-hyp Epoxide 88.7 3.1 6.7E-05 42.5 10.3 42 799-843 155-197 (211)
316 PF03033 Glyco_transf_28: Glyc 88.7 0.35 7.6E-06 45.8 3.0 28 31-60 8-35 (139)
317 PF09419 PGP_phosphatase: Mito 88.4 1.1 2.3E-05 44.0 6.1 59 608-668 39-108 (168)
318 COG0637 Predicted phosphatase/ 88.3 0.52 1.1E-05 48.8 4.2 35 629-667 91-125 (221)
319 PLN02207 UDP-glycosyltransfera 88.1 8.1 0.00018 44.8 14.1 133 315-473 275-425 (468)
320 TIGR01652 ATPase-Plipid phosph 87.9 1.5 3.3E-05 56.4 8.9 41 623-667 630-670 (1057)
321 TIGR02137 HSK-PSP phosphoserin 87.7 0.75 1.6E-05 46.9 4.8 36 627-667 71-106 (203)
322 PF03031 NIF: NLI interacting 86.0 1 2.2E-05 43.8 4.6 52 611-667 1-74 (159)
323 KOG2116 Protein involved in pl 85.2 1.3 2.9E-05 51.2 5.5 71 607-686 527-614 (738)
324 PLN03190 aminophospholipid tra 85.0 5.1 0.00011 51.8 11.2 41 623-667 725-765 (1178)
325 PF10933 DUF2827: Protein of u 84.4 70 0.0015 35.2 22.0 106 376-494 242-350 (364)
326 COG0241 HisB Histidinol phosph 84.2 1.6 3.5E-05 43.2 5.0 39 610-652 5-55 (181)
327 TIGR02245 HAD_IIID1 HAD-superf 83.3 2.1 4.6E-05 43.1 5.5 59 604-667 15-83 (195)
328 KOG4626 O-linked N-acetylgluco 82.7 12 0.00026 43.4 11.5 179 310-511 753-944 (966)
329 COG4996 Predicted phosphatase 82.6 2.6 5.6E-05 38.6 5.1 53 611-667 1-80 (164)
330 TIGR02250 FCP1_euk FCP1-like p 80.7 3.3 7.2E-05 40.2 5.7 56 607-667 3-96 (156)
331 COG5083 SMP2 Uncharacterized p 80.5 1.3 2.8E-05 48.7 2.9 70 605-686 370-453 (580)
332 COG4359 Uncharacterized conser 80.0 3.7 8.1E-05 40.1 5.5 57 625-685 74-130 (220)
333 KOG1615 Phosphoserine phosphat 78.0 3.3 7.3E-05 40.8 4.6 39 626-668 90-128 (227)
334 PF15024 Glyco_transf_18: Glyc 76.7 7.1 0.00015 45.2 7.5 106 386-506 323-454 (559)
335 PRK10725 fructose-1-P/6-phosph 75.4 3 6.6E-05 41.6 3.8 40 797-839 143-182 (188)
336 COG1703 ArgK Putative periplas 75.2 47 0.001 35.6 12.4 118 33-184 63-180 (323)
337 PF08660 Alg14: Oligosaccharid 75.0 9 0.0002 37.8 6.9 31 146-176 91-127 (170)
338 PF04413 Glycos_transf_N: 3-De 74.8 21 0.00045 35.8 9.6 73 146-235 94-166 (186)
339 PF06941 NT5C: 5' nucleotidase 73.9 3.2 6.9E-05 41.9 3.5 36 626-665 75-117 (191)
340 KOG1021 Acetylglucosaminyltran 72.5 25 0.00055 40.8 10.9 85 395-486 334-423 (464)
341 PF06437 ISN1: IMP-specific 5' 72.3 6.2 0.00013 43.2 5.3 215 609-844 146-401 (408)
342 KOG0208 Cation transport ATPas 72.3 6.6 0.00014 47.9 6.0 42 622-667 703-744 (1140)
343 PLN02919 haloacid dehalogenase 72.2 20 0.00043 46.2 10.8 184 608-862 73-282 (1057)
344 PF10087 DUF2325: Uncharacteri 71.3 8 0.00017 34.1 5.1 81 352-446 3-89 (97)
345 TIGR03609 S_layer_CsaB polysac 70.1 1.6E+02 0.0035 31.7 16.5 40 391-439 237-276 (298)
346 TIGR02251 HIF-SF_euk Dullard-l 70.0 5.9 0.00013 38.8 4.3 53 610-667 1-80 (162)
347 PF05159 Capsule_synth: Capsul 68.6 40 0.00086 35.9 10.7 123 313-464 114-244 (269)
348 KOG1615 Phosphoserine phosphat 68.5 15 0.00032 36.5 6.4 41 789-834 151-191 (227)
349 COG2327 WcaK Polysaccharide py 67.4 2.2E+02 0.0047 32.0 29.2 77 395-480 276-357 (385)
350 KOG1192 UDP-glucuronosyl and U 65.5 29 0.00063 40.6 9.8 109 384-501 334-449 (496)
351 PF00702 Hydrolase: haloacid d 64.9 8.6 0.00019 39.0 4.6 41 623-667 126-166 (215)
352 TIGR01548 HAD-SF-IA-hyp1 haloa 64.7 11 0.00024 37.9 5.3 44 629-677 111-154 (197)
353 KOG0204 Calcium transporting A 63.8 47 0.001 40.5 10.5 41 623-667 646-686 (1034)
354 COG4087 Soluble P-type ATPase 63.2 8.7 0.00019 35.5 3.5 50 614-668 18-69 (152)
355 PF03016 Exostosin: Exostosin 63.1 7.2 0.00016 42.3 3.8 70 396-469 228-300 (302)
356 PF00702 Hydrolase: haloacid d 62.7 3.8 8.2E-05 41.7 1.4 33 801-836 183-215 (215)
357 COG4370 Uncharacterized protei 62.7 8.3 0.00018 40.8 3.8 152 323-500 234-406 (412)
358 PF06925 MGDG_synth: Monogalac 62.5 43 0.00092 32.9 8.8 62 146-234 88-153 (169)
359 TIGR01545 YfhB_g-proteo haloac 61.6 6.2 0.00013 40.5 2.7 46 791-842 156-201 (210)
360 PF12710 HAD: haloacid dehalog 60.1 3.9 8.5E-05 40.8 1.0 33 797-833 157-192 (192)
361 COG4087 Soluble P-type ATPase 59.8 9.1 0.0002 35.3 3.1 27 812-841 92-118 (152)
362 PF13242 Hydrolase_like: HAD-h 59.6 8 0.00017 32.2 2.6 43 800-845 8-52 (75)
363 PLN02770 haloacid dehalogenase 59.6 15 0.00032 38.7 5.3 47 628-679 112-158 (248)
364 TIGR01548 HAD-SF-IA-hyp1 haloa 58.6 6.1 0.00013 39.9 2.1 32 797-831 162-193 (197)
365 COG0546 Gph Predicted phosphat 57.6 19 0.00041 37.1 5.6 45 628-677 93-137 (220)
366 TIGR03333 salvage_mtnX 2-hydro 57.1 8.3 0.00018 39.6 2.8 41 795-842 142-182 (214)
367 TIGR02193 heptsyl_trn_I lipopo 56.6 66 0.0014 35.1 10.0 133 315-472 179-319 (319)
368 PRK13288 pyrophosphatase PpaX; 56.5 16 0.00035 37.3 4.8 46 627-677 85-130 (214)
369 PF06888 Put_Phosphatase: Puta 56.2 34 0.00074 35.6 7.1 50 791-842 144-196 (234)
370 TIGR02254 YjjG/YfnB HAD superf 55.8 9.1 0.0002 39.3 2.9 41 798-841 154-196 (224)
371 TIGR01449 PGP_bact 2-phosphogl 55.5 21 0.00046 36.2 5.5 45 628-677 89-133 (213)
372 TIGR01662 HAD-SF-IIIA HAD-supe 54.0 37 0.0008 31.5 6.5 40 797-839 86-127 (132)
373 TIGR01261 hisB_Nterm histidino 53.9 17 0.00037 35.4 4.3 44 796-842 103-146 (161)
374 TIGR01454 AHBA_synth_RP 3-amin 53.6 17 0.00036 36.9 4.3 39 626-668 77-115 (205)
375 PRK10563 6-phosphogluconate ph 53.2 12 0.00027 38.4 3.3 44 797-843 143-186 (221)
376 PHA02597 30.2 hypothetical pro 53.0 6.7 0.00014 39.6 1.3 40 797-841 131-172 (197)
377 TIGR01489 DKMTPPase-SF 2,3-dik 52.9 14 0.00029 36.7 3.5 36 628-667 76-111 (188)
378 PRK06698 bifunctional 5'-methy 52.9 11 0.00023 43.9 3.0 39 797-840 386-424 (459)
379 PRK10748 flavin mononucleotide 52.4 13 0.00029 38.8 3.5 30 608-637 8-37 (238)
380 PRK09449 dUMP phosphatase; Pro 52.3 12 0.00025 38.6 3.0 41 798-841 152-194 (224)
381 COG1887 TagB Putative glycosyl 52.1 2.8E+02 0.006 31.4 14.1 168 310-505 202-384 (388)
382 TIGR02195 heptsyl_trn_II lipop 51.1 97 0.0021 34.1 10.3 106 311-440 169-278 (334)
383 COG4030 Uncharacterized protei 49.8 14 0.00029 37.5 2.7 41 797-841 191-233 (315)
384 TIGR01491 HAD-SF-IB-PSPlk HAD- 49.6 26 0.00056 35.1 5.0 37 627-667 83-119 (201)
385 PF13419 HAD_2: Haloacid dehal 49.6 17 0.00037 35.2 3.5 48 626-678 79-126 (176)
386 TIGR01422 phosphonatase phosph 49.6 21 0.00046 37.5 4.5 47 627-678 102-149 (253)
387 cd03789 GT1_LPS_heptosyltransf 49.5 77 0.0017 33.8 8.9 100 318-440 124-225 (279)
388 TIGR01454 AHBA_synth_RP 3-amin 49.4 11 0.00025 38.1 2.3 42 797-841 132-173 (205)
389 TIGR02253 CTE7 HAD superfamily 49.1 20 0.00044 36.6 4.2 47 627-678 97-143 (221)
390 TIGR03351 PhnX-like phosphonat 48.6 22 0.00047 36.5 4.3 38 626-667 89-126 (220)
391 PRK10826 2-deoxyglucose-6-phos 48.5 26 0.00056 36.0 4.9 48 626-678 94-141 (222)
392 TIGR00715 precor6x_red precorr 47.7 3.7E+02 0.0079 28.5 21.5 87 376-472 165-255 (256)
393 PLN03243 haloacid dehalogenase 47.5 26 0.00057 37.2 4.8 47 627-678 112-158 (260)
394 TIGR01490 HAD-SF-IB-hyp1 HAD-s 47.2 36 0.00079 34.2 5.6 39 625-667 88-126 (202)
395 PRK10964 ADP-heptose:LPS hepto 47.0 1.2E+02 0.0026 33.2 10.1 48 385-441 234-281 (322)
396 TIGR01656 Histidinol-ppas hist 46.4 30 0.00064 33.1 4.5 42 796-840 101-142 (147)
397 PRK09552 mtnX 2-hydroxy-3-keto 46.2 12 0.00026 38.5 2.0 35 628-667 78-112 (219)
398 TIGR01993 Pyr-5-nucltdase pyri 46.2 15 0.00033 36.5 2.6 27 612-638 2-28 (184)
399 PF01075 Glyco_transf_9: Glyco 45.9 1.2E+02 0.0025 31.6 9.5 105 314-440 104-210 (247)
400 PLN02575 haloacid dehalogenase 45.3 27 0.00059 39.2 4.6 47 627-678 219-265 (381)
401 PRK13222 phosphoglycolate phos 45.0 37 0.00079 34.8 5.4 39 626-668 95-133 (226)
402 TIGR01428 HAD_type_II 2-haloal 45.0 30 0.00064 34.8 4.6 47 627-678 95-141 (198)
403 PF06888 Put_Phosphatase: Puta 44.3 36 0.00077 35.5 5.0 40 627-668 74-113 (234)
404 TIGR03351 PhnX-like phosphonat 42.9 16 0.00036 37.4 2.3 41 798-841 147-188 (220)
405 TIGR02009 PGMB-YQAB-SF beta-ph 42.5 25 0.00055 34.7 3.6 45 626-677 90-134 (185)
406 PRK13223 phosphoglycolate phos 42.1 33 0.00072 36.7 4.6 47 627-678 104-150 (272)
407 KOG3120 Predicted haloacid deh 41.2 30 0.00064 35.2 3.6 53 788-842 154-209 (256)
408 COG2047 Uncharacterized protei 40.9 3.3E+02 0.0071 27.9 10.6 144 314-488 82-231 (258)
409 TIGR01488 HAD-SF-IB Haloacid D 40.4 35 0.00076 33.4 4.2 37 627-667 76-112 (177)
410 KOG0206 P-type ATPase [General 39.9 23 0.0005 45.1 3.3 40 624-667 651-690 (1151)
411 COG3700 AphA Acid phosphatase 39.5 66 0.0014 31.5 5.4 33 625-661 115-147 (237)
412 PRK11590 hypothetical protein; 39.5 47 0.001 33.9 5.0 46 628-679 99-145 (211)
413 KOG1618 Predicted phosphatase 39.2 30 0.00066 37.0 3.5 61 608-668 33-99 (389)
414 TIGR01493 HAD-SF-IA-v2 Haloaci 37.6 25 0.00054 34.5 2.6 29 612-640 1-29 (175)
415 PRK13225 phosphoglycolate phos 37.2 46 0.001 35.6 4.7 38 627-668 145-182 (273)
416 TIGR01509 HAD-SF-IA-v3 haloaci 36.9 51 0.0011 32.3 4.7 46 627-678 88-133 (183)
417 PRK13478 phosphonoacetaldehyde 36.4 48 0.001 35.2 4.7 36 628-667 105-140 (267)
418 TIGR02201 heptsyl_trn_III lipo 36.2 2.1E+02 0.0045 31.6 10.0 104 316-440 182-287 (344)
419 PF04392 ABC_sub_bind: ABC tra 36.0 1.2E+02 0.0026 32.7 7.8 102 328-440 114-219 (294)
420 PRK13226 phosphoglycolate phos 35.8 54 0.0012 33.9 4.9 46 627-677 98-143 (229)
421 PF04230 PS_pyruv_trans: Polys 35.6 5.1E+02 0.011 26.6 14.1 47 384-439 237-283 (286)
422 TIGR01494 ATPase_P-type ATPase 35.4 64 0.0014 37.9 6.0 55 609-667 326-386 (499)
423 PF01975 SurE: Survival protei 34.7 58 0.0013 32.9 4.7 37 7-61 1-37 (196)
424 PRK14988 GMP/IMP nucleotidase; 34.2 49 0.0011 34.2 4.2 47 627-678 96-142 (224)
425 PRK00207 sulfur transfer compl 34.2 65 0.0014 30.1 4.6 39 7-59 1-40 (128)
426 PLN02177 glycerol-3-phosphate 33.6 29 0.00063 40.5 2.6 43 794-843 173-215 (497)
427 KOG2884 26S proteasome regulat 33.6 3.4E+02 0.0073 27.7 9.4 113 349-473 109-228 (259)
428 PRK11587 putative phosphatase; 33.4 56 0.0012 33.4 4.5 45 627-677 86-130 (218)
429 PF12710 HAD: haloacid dehalog 32.8 47 0.001 32.9 3.7 38 627-668 92-129 (192)
430 TIGR03333 salvage_mtnX 2-hydro 32.5 69 0.0015 32.7 5.0 39 625-667 71-109 (214)
431 PRK05282 (alpha)-aspartyl dipe 32.3 3E+02 0.0064 28.7 9.5 110 317-443 3-124 (233)
432 PRK08942 D,D-heptose 1,7-bisph 32.3 27 0.00058 34.7 1.9 38 799-839 106-143 (181)
433 PF03308 ArgK: ArgK protein; 32.3 6.2E+02 0.013 26.9 11.7 114 33-180 41-154 (266)
434 PF13419 HAD_2: Haloacid dehal 31.9 26 0.00056 33.8 1.6 41 797-840 134-174 (176)
435 TIGR01494 ATPase_P-type ATPase 31.8 27 0.00059 41.0 2.1 39 797-842 394-432 (499)
436 TIGR02244 HAD-IG-Ncltidse HAD 31.6 84 0.0018 34.8 5.6 37 626-666 186-223 (343)
437 COG2204 AtoC Response regulato 31.3 8.8E+02 0.019 28.1 15.4 68 410-477 50-125 (464)
438 KOG0207 Cation transport ATPas 31.1 1.1E+02 0.0024 37.8 6.7 56 608-667 701-762 (951)
439 cd01020 TroA_b Metal binding p 30.8 2.7E+02 0.0058 29.6 9.3 88 398-491 46-136 (264)
440 PRK06698 bifunctional 5'-methy 30.7 56 0.0012 37.9 4.4 47 627-678 333-379 (459)
441 PF05728 UPF0227: Uncharacteri 30.3 2.1E+02 0.0045 28.7 7.8 27 150-176 61-87 (187)
442 TIGR01549 HAD-SF-IA-v1 haloaci 30.0 76 0.0017 30.2 4.6 34 628-665 68-101 (154)
443 KOG3109 Haloacid dehalogenase- 29.0 81 0.0018 32.2 4.4 51 790-845 156-208 (244)
444 KOG0853 Glycosyltransferase [C 28.4 1.3E+02 0.0028 35.0 6.5 30 30-61 45-83 (495)
445 PRK10916 ADP-heptose:LPS hepto 28.1 2.4E+02 0.0052 31.2 8.7 45 387-440 244-288 (348)
446 TIGR01545 YfhB_g-proteo haloac 28.0 1E+02 0.0022 31.5 5.3 46 627-678 97-143 (210)
447 COG2910 Putative NADH-flavin r 27.9 80 0.0017 31.4 4.1 33 7-60 1-33 (211)
448 KOG3120 Predicted haloacid deh 27.7 1.4E+02 0.003 30.6 5.7 49 608-668 11-86 (256)
449 PLN02177 glycerol-3-phosphate 27.5 42 0.00091 39.2 2.6 18 608-625 20-37 (497)
450 cd01018 ZntC Metal binding pro 27.2 7.5E+02 0.016 26.1 12.0 39 452-490 112-152 (266)
451 PRK05632 phosphate acetyltrans 27.2 3.9E+02 0.0084 32.9 10.9 26 32-59 14-39 (684)
452 PRK14988 GMP/IMP nucleotidase; 27.1 61 0.0013 33.4 3.5 44 799-845 152-197 (224)
453 PLN02940 riboflavin kinase 27.0 69 0.0015 36.2 4.2 48 627-679 96-144 (382)
454 COG0757 AroQ 3-dehydroquinate 26.8 2.2E+02 0.0048 26.8 6.4 69 368-438 28-98 (146)
455 KOG3040 Predicted sugar phosph 26.4 95 0.0021 31.4 4.3 59 608-668 5-66 (262)
456 TIGR01544 HAD-SF-IE haloacid d 26.1 86 0.0019 33.6 4.4 39 625-667 122-160 (277)
457 TIGR01509 HAD-SF-IA-v3 haloaci 26.1 57 0.0012 31.9 3.0 42 796-840 138-181 (183)
458 TIGR02009 PGMB-YQAB-SF beta-ph 26.0 38 0.00082 33.4 1.7 39 798-839 144-182 (185)
459 COG1011 Predicted hydrolase (H 26.0 62 0.0013 33.1 3.4 31 608-638 2-32 (229)
460 PRK13015 3-dehydroquinate dehy 25.7 1.8E+02 0.004 27.7 5.9 102 368-472 29-140 (146)
461 COG2216 KdpB High-affinity K+ 25.7 44 0.00096 38.3 2.2 44 815-868 510-553 (681)
462 smart00577 CPDc catalytic doma 25.5 61 0.0013 31.0 2.9 34 802-838 104-137 (148)
463 KOG0207 Cation transport ATPas 25.1 71 0.0015 39.3 3.8 49 788-845 766-814 (951)
464 TIGR02254 YjjG/YfnB HAD superf 25.0 1E+02 0.0022 31.3 4.8 45 628-678 101-145 (224)
465 TIGR01549 HAD-SF-IA-v1 haloaci 24.7 42 0.00092 32.0 1.7 35 797-835 119-153 (154)
466 PF12689 Acid_PPase: Acid Phos 24.4 1E+02 0.0022 30.4 4.2 34 788-824 101-134 (169)
467 TIGR01990 bPGM beta-phosphoglu 24.4 93 0.002 30.5 4.2 45 626-677 89-133 (185)
468 PF01282 Ribosomal_S24e: Ribos 23.9 1.7E+02 0.0036 25.1 4.9 31 788-818 2-35 (84)
469 COG2503 Predicted secreted aci 23.8 1.1E+02 0.0023 31.9 4.2 57 608-668 77-166 (274)
470 TIGR01361 DAHP_synth_Bsub phos 23.6 5.4E+02 0.012 27.3 9.8 112 321-440 28-140 (260)
471 PRK09449 dUMP phosphatase; Pro 23.6 96 0.0021 31.7 4.2 46 627-678 98-143 (224)
472 PRK10563 6-phosphogluconate ph 23.5 48 0.001 33.9 1.9 15 609-623 3-17 (221)
473 COG0803 LraI ABC-type metal io 23.0 5.9E+02 0.013 27.6 10.3 104 400-509 77-190 (303)
474 TIGR01088 aroQ 3-dehydroquinat 23.0 2.3E+02 0.0049 26.9 5.9 103 367-472 26-138 (141)
475 TIGR01691 enolase-ppase 2,3-di 23.0 2E+02 0.0043 29.7 6.3 42 797-841 153-194 (220)
476 KOG4549 Magnesium-dependent ph 22.1 1.9E+02 0.004 26.9 5.0 55 610-668 18-85 (144)
477 TIGR01283 nifE nitrogenase mol 21.9 1.1E+03 0.023 27.3 12.8 82 372-475 213-296 (456)
478 TIGR02252 DREG-2 REG-2-like, H 21.8 1.2E+02 0.0025 30.5 4.4 46 627-678 108-153 (203)
479 PRK12311 rpsB 30S ribosomal pr 21.1 7E+02 0.015 27.4 10.2 71 590-666 7-83 (326)
480 COG2861 Uncharacterized protei 21.1 5.3E+02 0.011 26.9 8.6 49 610-666 178-231 (250)
481 PRK11133 serB phosphoserine ph 20.8 1.6E+02 0.0035 32.3 5.4 39 625-667 182-220 (322)
482 cd02071 MM_CoA_mut_B12_BD meth 20.8 4.5E+02 0.0098 24.0 7.7 41 625-667 63-103 (122)
483 COG0429 Predicted hydrolase of 20.8 1.1E+02 0.0025 33.3 4.0 37 10-60 77-113 (345)
484 PF11019 DUF2608: Protein of u 20.7 1.1E+02 0.0023 32.4 3.8 33 792-825 157-189 (252)
485 PF04312 DUF460: Protein of un 20.7 69 0.0015 30.1 2.0 53 611-667 44-101 (138)
486 cd03146 GAT1_Peptidase_E Type 20.3 5.4E+02 0.012 26.2 8.9 110 319-443 3-125 (212)
487 PF11019 DUF2608: Protein of u 20.0 1.3E+02 0.0029 31.6 4.4 37 628-668 85-124 (252)
488 PRK08238 hypothetical protein; 20.0 1.7E+02 0.0037 34.1 5.7 45 793-845 124-168 (479)
No 1
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=4.9e-123 Score=1097.74 Aligned_cols=877 Identities=73% Similarity=1.187 Sum_probs=761.8
Q ss_pred cceEEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchh
Q 002665 5 DFNMKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTEN 84 (895)
Q Consensus 5 ~~~~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~ 84 (895)
++|||+|||+||+|||+|||+|||+|||||.+||.+||++|+++||||+|+|+|+...+|.++++|+++.|.+++.+.++
T Consensus 168 ~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~~~~~~~~ 247 (1050)
T TIGR02468 168 KKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEMLTPRSSEN 247 (1050)
T ss_pred CceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCcccccccccccc
Confidence 48999999999999999999999999999999999999999999999999999999988999999999999998877888
Q ss_pred hhcccCCCCCcEEEEecCCCCCccccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHH
Q 002665 85 LMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAAL 164 (895)
Q Consensus 85 ~~~~~~~~~g~~i~r~~~~~~~~~l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~ 164 (895)
+.+++...+|++|+|+|++|..+|++|+.+||++..|.+.++.++.++.+.|.+.+..+++.+|||||+|||+++++++.
T Consensus 248 ~~~~~~~~~g~rIvRip~GP~~~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaHyw~sG~aa~~ 327 (1050)
T TIGR02468 248 DGDEMGESSGAYIIRIPFGPRDKYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHYADAGDSAAL 327 (1050)
T ss_pred ccccccCCCCeEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEECcchHHHHHHH
Confidence 88899999999999999999866999999999999999999999988878777766555556799999999999999999
Q ss_pred HhccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHH
Q 002665 165 LSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVL 244 (895)
Q Consensus 165 ~~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~ 244 (895)
+++.+++|+|+|+|+++..++.+++..|......+...|++.+|+.+|+.++..||.||++|++++++++..|+.+.|.+
T Consensus 328 L~~~lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~~lY~~~~~~~ 407 (1050)
T TIGR02468 328 LSGALNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWGLYDGFDVIL 407 (1050)
T ss_pred HHHhhCCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHHHHHHHHHHhccCCchh
Confidence 99999999999999999999887877776666667778889999999999999999999999999999999999999999
Q ss_pred HHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeC
Q 002665 245 ERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALAR 324 (895)
Q Consensus 245 ~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgr 324 (895)
.++|++++++||.++|++++++.|||||||++.|.|....................+..+..+.+++..+++++|+++||
T Consensus 408 ~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~~~~l~r~~~~pdkpvIL~VGR 487 (1050)
T TIGR02468 408 ERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPIWSEIMRFFTNPRKPMILALAR 487 (1050)
T ss_pred hhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccchhhHHHHhhcccCCCcEEEEEcC
Confidence 99999999999999999999999999999999999854332111100000112234556778888888899999999999
Q ss_pred CCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHH
Q 002665 325 PDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRL 404 (895)
Q Consensus 325 l~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~ 404 (895)
+++.||++.+|+||..+..+.+.+++.+|+|++++.+.+......+..++..+++++++.++|.|+|+++.++++.+|+.
T Consensus 488 L~p~KGi~~LIeAf~~L~~l~~~~nL~LIiG~gdd~d~l~~~~~~~l~~L~~li~~lgL~g~V~FlG~v~~edvp~lYr~ 567 (1050)
T TIGR02468 488 PDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSSGSSSVLTSVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRL 567 (1050)
T ss_pred CccccCHHHHHHHHHHhHhhccCCCEEEEEecCchhhhhhccchHHHHHHHHHHHHhCCCCeEEecCCCCHHHHHHHHHH
Confidence 99999999999999999765556788788898887777766667778899999999999999999999999999999999
Q ss_pred hhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHhhCHHHHHHHHHH
Q 002665 405 AAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQN 484 (895)
Q Consensus 405 a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~ 484 (895)
|+.++||||+||+.||||++++||||||+|||+|+.||+.|++.++.+|++|+|.|+++++++|.+++++++.+++++++
T Consensus 568 Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~Dpelr~~m~~~ 647 (1050)
T TIGR02468 568 AAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVADKQLWAECRQN 647 (1050)
T ss_pred hhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCCcEEEECCCCHHHHHHHHHHHhhCHHHHHHHHHH
Confidence 96666799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhCCHHHHHHHHHHHHHHhhhcCCCCCCCC-CCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCc
Q 002665 485 GLKNIHQFSWPEHCKSYLSRISSCKQRQPRWQRSD-DGLDNSESDSPGDSWRDIHDLSLNLKLSLEGDKNEGGSTLDNSL 563 (895)
Q Consensus 485 ~~~~v~~~s~~~~a~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (895)
+++.+++|+|+.++++|++.+..+..++++++... .+.+++++++|.+.++++++|| |++|+|++....+.+ ...
T Consensus 648 gr~~v~~FSWe~ia~~yl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~~~--~~~ 723 (1050)
T TIGR02468 648 GLKNIHLFSWPEHCKTYLSRIASCRPRHPQWQRDTDDGEEASEDESPGDSLRDIQDIS--LNLSVDGDKESNNGS--SNV 723 (1050)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHhccCcccccccccccccccccCccccccccccch--hhccccccccccccc--ccc
Confidence 99999889999999999999999998887776532 2345667788998999999999 666666664332111 112
Q ss_pred chhhhhccchhhhHHHHHHhhccccCCcccCcccccCCCCcccccccEEEE--EEecCCCChhhHHHHHHHHHHHhccCC
Q 002665 564 DTEENAVTGKNKLENAVLALSNRTIGGTQKADHNVASGKFPALRRRKYVFV--IAADCDTTSDFLEIIKKVVEAAGKDNS 641 (895)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~--~DiDGTL~~~~~~~~~~~l~~l~~~g~ 641 (895)
+.++++.++...+++++.++++...+++++.+.++..+|+|.++.+++|++ +|+|.| ....+.++++++++++...
T Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~via~D~d~~--~~~~~~l~~~~~~~~~~~~ 801 (1050)
T TIGR02468 724 EGSGPPADRVAKIENAVRSWSKSPKGSSAKAQQGSGAGKYPALRRRKRLFVIAVDCYDD--KDLLQIIKNIFEAVRKERM 801 (1050)
T ss_pred ccccchhhHHHHHHHHHhhccccccccccccccccccccCccccccceEEEEEeccCCC--CChHHHHHHHHHHHhcccc
Confidence 344555566666666766666655668899999999999999999999999 888888 4467778888888873211
Q ss_pred CCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCceEecCCCC-CCCCCCCCcccCcchhhhhccccCcchHHHH
Q 002665 642 AGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPSSS-TEDNHGLPFLVDLDYRFHTEYRWGGEGLRKT 720 (895)
Q Consensus 642 ~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 720 (895)
.+.+.|+++|||++.++.+++++.++++..||++||+.|++|||.... .+.. .+..|..|..+|.+.|..+.++..
T Consensus 802 ~~~igfv~aTGR~l~~~~~~l~~~~lp~~~PD~lI~~vGTeIyy~~~~~~~~~---~~~~D~~w~~hI~~rW~ge~~r~~ 878 (1050)
T TIGR02468 802 EGSSGFILSTSMTISEIQSFLKSGGLNPTDFDALICNSGSELYYPSLNGSEEG---KLVADQDYHSHIEYRWGGEGLRKT 878 (1050)
T ss_pred CCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCcceeccCcCCCCCC---CceECHHHHHHHHccCCcHHHHHH
Confidence 356999999999999999999999995337999999999999996321 1122 577899999999999999999988
Q ss_pred HHHHhhhccCCCCcc-CcccccccccccceEEEEEecCCCCCcCHHHHHHHHHhhcCeEEEEEeeCCeeEEeecCCCChH
Q 002665 721 LVRWAASVNDKKGEE-GKIVEEDESRSTIHCYAFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRS 799 (895)
Q Consensus 721 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg 799 (895)
+.+++....+.++.. ..+..+....+..||++|++.++...+.++++++.|+..+.+++++++++..+|||+|.++|||
T Consensus 879 L~~l~~~~~~~~~~~~~~l~~Q~~~~q~~~k~SY~v~d~~~~~~v~elr~~Lr~~gLr~~~iys~~~~~LDVlP~~ASKg 958 (1050)
T TIGR02468 879 LVKWAASINEKKGENEEQIVEEDEESSTDHCYAFKVKDPSKVPPVKELRKLLRIQGLRCHAVYCRNGTRLNVIPLLASRS 958 (1050)
T ss_pred HHHHhhhcccccccccccceecChhhCCCceEEEEecCcccCccHHHHHHHHHhCCCceEEEeecCCcEeeeeeCCCCHH
Confidence 888887654444433 3466777888999999999878888888999999999999999999999745999999999999
Q ss_pred HHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEEcCchh-hhHhhhhcCCCCCCCcccCCCCceEEeccccC
Q 002665 800 QALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGE-SARKLHANRNYSLEDVISFDSHNVIQVDEACD 878 (895)
Q Consensus 800 ~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaMgNA~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~ 878 (895)
.||+||+.+|||+++++++|+||++||||++||.+...+|++...++ +++.++++++|.++||+|.+|||+.+++++|.
T Consensus 959 qAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~G~~~tvi~~g~~~~~s~~l~~~~sY~~eDVvp~dspni~~~~~~~~ 1038 (1050)
T TIGR02468 959 QALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTVILKGVVSRGSEQLHANRSYPLDDVVPLDSPNIVQATGGSS 1038 (1050)
T ss_pred HHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhCCceeEEEEecccccchhhhcccCCCcccccccCCCCCeEeecCCCC
Confidence 99999999999999999999999999997779999999999998774 55778899999999999999999999988999
Q ss_pred hHHHHHHHHHhc
Q 002665 879 SYDIRASLEKLG 890 (895)
Q Consensus 879 ~~gI~~al~~~~ 890 (895)
.+.|..||++||
T Consensus 1039 ~~di~~aL~~l~ 1050 (1050)
T TIGR02468 1039 SDDISDALKKLS 1050 (1050)
T ss_pred HHHHHHHHHhcC
Confidence 999999999986
No 2
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=100.00 E-value=3.7e-55 Score=511.49 Aligned_cols=460 Identities=28% Similarity=0.466 Sum_probs=349.0
Q ss_pred cceEEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHH--------hcCCCcc----eEEEeeccccCCCCCCCCCc
Q 002665 5 DFNMKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARAL--------GSMPGVY----RVDLLTRQVSAPDVDWTYAE 72 (895)
Q Consensus 5 ~~~~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L--------~~~g~~~----~V~vit~~~~~~~~~~~~~~ 72 (895)
+.|||+|||.||+++.++ .+|+ ||||||..||.++|++| +++| | +|+|+|+...+.. ...+.+
T Consensus 254 ~~~rIa~lS~Hg~~~~~~-~lG~-~DtGGq~vYV~elaraL~~~~~~~La~~G--~~v~~~V~I~TR~~~~~~-~~~~~~ 328 (784)
T TIGR02470 254 MVFNVVILSPHGYFGQEN-VLGL-PDTGGQVVYILDQVRALENEMLQRIKLQG--LEITPKILIVTRLIPDAE-GTTCNQ 328 (784)
T ss_pred ccceEEEEecccccCCcc-ccCC-CCCCCceeHHHHHHHHHHHHHHHHHHhcC--CCccceEEEEecCCCCcc-cccccc
Confidence 569999999999998888 5998 69999999999999985 6888 8 7889999864322 234445
Q ss_pred cccccccccchhhhcccCCCCCcEEEEecCCCCC-----ccccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCC
Q 002665 73 PSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKD-----KYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIW 147 (895)
Q Consensus 73 ~~e~~~~~~~~~~~~~~~~~~g~~i~r~~~~~~~-----~~l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~ 147 (895)
+.|.. ...++++|+|+|+++.. +|++|+.+|||+..|.+.+.+.+... .+.+
T Consensus 329 ~~e~~------------~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~-----------~~~~ 385 (784)
T TIGR02470 329 RLEKV------------YGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAE-----------LQGK 385 (784)
T ss_pred ccccc------------cCCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHh-----------cCCC
Confidence 44333 34579999999999852 47899999999999999888776431 1246
Q ss_pred CcEEEeccCCchHHHHHHhccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCH
Q 002665 148 PVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTR 227 (895)
Q Consensus 148 pDvIh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~ 227 (895)
||+||+|||+.++++..+++.+|+|+++|.|++...++. ..|. ........|++..++.+|..++..||.||++|.
T Consensus 386 pDlIHahy~d~glva~lla~~lgVP~v~t~HsL~~~K~~---~~g~-~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT~ 461 (784)
T TIGR02470 386 PDLIIGNYSDGNLVASLLARKLGVTQCTIAHALEKTKYP---DSDI-YWQEFEDKYHFSCQFTADLIAMNAADFIITSTY 461 (784)
T ss_pred CCEEEECCCchHHHHHHHHHhcCCCEEEECCcchhhccc---cccc-ccccchhHHHhhhhhhHHHHHHhcCCEEEECcH
Confidence 999999999999999999999999999999999766632 2222 223344577788888889999999999999999
Q ss_pred HHHH------HHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCC--CC
Q 002665 228 QEIE------EQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPA--SP 299 (895)
Q Consensus 228 ~~~~------~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~--~~ 299 (895)
+++. .+|+.|..+... .+ ++...||+ .+.+|+.|||+|+|...|.|........ ....+.-. --
T Consensus 462 qEi~~~~~~v~qY~s~~~ft~p--~L--y~vvnGid---~~~~Ki~VVpPGVD~~iF~P~~~~~~r~-~~~~~~ie~ll~ 533 (784)
T TIGR02470 462 QEIAGTKDSVGQYESHQAFTMP--GL--YRVVHGID---VFDPKFNIVSPGADESIYFPYSDKEKRL-TNLHPEIEELLF 533 (784)
T ss_pred HHhhhhhhhhhhhhhccccccc--ce--eeeecCcc---CCcCCeEEECCCcChhhcCCCCchhhhh-hhhhcchhhhcc
Confidence 8765 355555443321 00 01122332 2345999999999999988754321100 00000000 00
Q ss_pred CCchhhhhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCC-chhhhhhhHHHHHHHHHHH
Q 002665 300 DPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDD-IDEMSGTNAALLLSILKLI 378 (895)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~-~~~l~~~~~~~~~~i~~~~ 378 (895)
.+....+...+..++++|+|+++||+++.||++.+++||.++..+.+..+++ |+|++.. ......+..+...++..++
T Consensus 534 ~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~~~~LV-IVGGg~~~~~s~d~ee~~~i~~L~~la 612 (784)
T TIGR02470 534 SLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRELVNLV-VVAGKLDAKESKDREEQAEIEKMHNLI 612 (784)
T ss_pred chhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCCCeEEE-EEeCCcccccccchhHHHHHHHHHHHH
Confidence 0000111122333678899999999999999999999999876555556664 5555432 2222222334667888999
Q ss_pred HHcCCCCCEEeCCCC-CCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeC
Q 002665 379 DKYDLYGQVAYPKHH-KQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVD 457 (895)
Q Consensus 379 ~~~~l~~~v~~~g~~-~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~ 457 (895)
+++++.++|.|+|.. +..++.++|+.++.++||||+||++|+||++++||||||+|||+|+.||+.|+|.++.+|++|+
T Consensus 613 ~~~gL~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfLVd 692 (784)
T TIGR02470 613 DQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHID 692 (784)
T ss_pred HHhCCCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeC
Confidence 999999999999975 6788999998654445899999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHh----hCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHHH
Q 002665 458 PHDQQSIADALLKLV----SDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRI 505 (895)
Q Consensus 458 p~d~~~la~ai~~ll----~~~~~~~~~~~~~~~~v-~~~s~~~~a~~~~~~l 505 (895)
|.|+++++++|.+++ +|++.|+++++++++++ ++|||+.++++++++.
T Consensus 693 p~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 693 PYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred CCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 999999999999886 59999999999999998 7999999999999886
No 3
>PLN00142 sucrose synthase
Probab=100.00 E-value=3.3e-54 Score=503.09 Aligned_cols=459 Identities=27% Similarity=0.463 Sum_probs=343.1
Q ss_pred cceEEEEEecccccccCccCCCCCCCCCchhhHHHHHH--------HHHhcCCCcceE----EEeeccccCCCCCCCCCc
Q 002665 5 DFNMKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELA--------RALGSMPGVYRV----DLLTRQVSAPDVDWTYAE 72 (895)
Q Consensus 5 ~~~~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La--------~~L~~~g~~~~V----~vit~~~~~~~~~~~~~~ 72 (895)
+.|||+|||+||++++.+ ++|+ ||||||..||+++| ++|+++| |+| +|+||...+.. ..+|.+
T Consensus 278 ~~~~i~~iS~Hg~~~~~~-~lG~-~DtGGQ~vYVl~~aral~~el~~~l~~~G--~~v~~~v~i~TR~i~~~~-~~~~~~ 352 (815)
T PLN00142 278 MVFNVVIFSPHGYFGQAN-VLGL-PDTGGQVVYILDQVRALENEMLLRIKQQG--LDIKPQILIVTRLIPDAK-GTTCNQ 352 (815)
T ss_pred HhHhhheecccccccccc-cCCC-CCCCCceehHHHHHHHHHHHHHHHHHhcC--CCccceeEEEEeccCCcc-CCcccC
Confidence 457999999999999999 5999 99999999999766 6777888 866 59999875444 445666
Q ss_pred cccccccccchhhhcccCCCCCcEEEEecCCCCC----ccccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCC
Q 002665 73 PSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKD----KYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWP 148 (895)
Q Consensus 73 ~~e~~~~~~~~~~~~~~~~~~g~~i~r~~~~~~~----~~l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~p 148 (895)
+.|.+ ...++++|+|+|+++.. ++++|+.+|||+..|.+.+.+++.+. .+.+|
T Consensus 353 ~~e~v------------~~~~~~~I~rvP~g~~~~~l~~~i~ke~l~p~L~~f~~~~~~~~~~~-----------~~~~P 409 (815)
T PLN00142 353 RLEKV------------SGTEHSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAASEILAE-----------LQGKP 409 (815)
T ss_pred cceec------------cCCCceEEEecCCCCCccccccccCHHHHHHHHHHHHHHHHHHHHHh-----------cCCCC
Confidence 65544 33569999999999853 45689999999999999888777541 12469
Q ss_pred cEEEeccCCchHHHHHHhccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHH
Q 002665 149 VAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQ 228 (895)
Q Consensus 149 DvIh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~ 228 (895)
|+||+|||+.+++|..+++.+|+|+|+|.|+++..++. ..| .........|++..|+.+|..++..||.||++|.+
T Consensus 410 DlIHaHYwdsg~vA~~La~~lgVP~v~T~HsL~k~K~~---~~~-~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIasT~q 485 (815)
T PLN00142 410 DLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYP---DSD-IYWKKFDDKYHFSCQFTADLIAMNHADFIITSTYQ 485 (815)
T ss_pred CEEEECCccHHHHHHHHHHHhCCCEEEEcccchhhhcc---ccC-CcccccchhhhhhhchHHHHHHHHhhhHHHhCcHH
Confidence 99999999999999999999999999999999877753 222 23344566788888888999999999999999999
Q ss_pred HHH------HHHHHhcCCC-hHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCC--C
Q 002665 229 EIE------EQWRLYDGFD-PVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPAS--P 299 (895)
Q Consensus 229 ~~~------~~~~~y~~~~-~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~--~ 299 (895)
++. .+|..|..+. |.+ ++.-.|++ .+.+++.|||+|+|...|.|...... +...+.+.-.. -
T Consensus 486 Ei~g~~~~i~qy~sh~~f~~p~L-----~rvv~GId---~~~~ki~VVppGvD~~~F~P~~~~~~-rl~~l~n~I~~~l~ 556 (815)
T PLN00142 486 EIAGSKDTVGQYESHTAFTLPGL-----YRVVHGID---VFDPKFNIVSPGADMSIYFPYTEKQK-RLTSLHPSIEELLY 556 (815)
T ss_pred HHhcccchhhhhhcccccccchh-----hhhhcccc---ccccCeeEECCCCChhhcCCCChHHh-hHHhhcccchhhcC
Confidence 886 3454443332 221 23334443 23358999999999998876432110 00000000000 0
Q ss_pred CCchhhhhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecC-CCchhhhhhhHHHHHHHHHHH
Q 002665 300 DPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNR-DDIDEMSGTNAALLLSILKLI 378 (895)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~-~~~~~l~~~~~~~~~~i~~~~ 378 (895)
.+....+...+...+++++|+++||+++.||++.+++|++++.++.+..++ +|+|++ +.......+..+...++..++
T Consensus 557 ~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~L-VIVGgg~d~~~s~d~ee~~el~~L~~La 635 (815)
T PLN00142 557 SPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNL-VVVGGFIDPSKSKDREEIAEIKKMHSLI 635 (815)
T ss_pred ChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEE-EEEECCccccccccHHHHHHHHHHHHHH
Confidence 000011111222356788999999999999999999999988655555555 456655 211111111223456788899
Q ss_pred HHcCCCCCEEeCCCCC-CCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeC
Q 002665 379 DKYDLYGQVAYPKHHK-QSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVD 457 (895)
Q Consensus 379 ~~~~l~~~v~~~g~~~-~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~ 457 (895)
+++++.++|.|.|... ..+..++|+..+.+.|+||+||++|+||++++||||||+|||+|+.||+.|+|.++.+|++|+
T Consensus 636 ~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV~ 715 (815)
T PLN00142 636 EKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHID 715 (815)
T ss_pred HHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeC
Confidence 9999999999998654 334444554221122999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHh----hCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHHH
Q 002665 458 PHDQQSIADALLKLV----SDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRI 505 (895)
Q Consensus 458 p~d~~~la~ai~~ll----~~~~~~~~~~~~~~~~v-~~~s~~~~a~~~~~~l 505 (895)
|.|+++++++|.+++ +|++.|+++++++++++ ++|||+.++++++++.
T Consensus 716 P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 716 PYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred CCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 999999999997654 69999999999999999 7999999999999876
No 4
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=100.00 E-value=2e-53 Score=488.95 Aligned_cols=438 Identities=51% Similarity=0.861 Sum_probs=343.3
Q ss_pred eEEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhh
Q 002665 7 NMKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLM 86 (895)
Q Consensus 7 ~~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 86 (895)
+||++||.||+++++++.+|++|+.||+++|+.+|+++|+++|++|+|+|+|+...++.+...|..+.+..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~~~~~~~~~--------- 71 (439)
T TIGR02472 1 LYLLLLSLHGLIRGHDLELGRDADTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDYAQPIERI--------- 71 (439)
T ss_pred CeEEEEeCCcCCCCCccccCCCCCCCCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCccCCCeeEe---------
Confidence 58999999999999999999999999999999999999999993339999998643332222333322221
Q ss_pred cccCCCCCcEEEEecCCCCCccccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHHh
Q 002665 87 QGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLS 166 (895)
Q Consensus 87 ~~~~~~~g~~i~r~~~~~~~~~l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~~ 166 (895)
.+|++++|++.++. .+..+...++++..|...+.+.+++. ..+|||||+|++.++.++.+++
T Consensus 72 -----~~gv~v~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~------------~~~~DvIH~h~~~~~~~~~~~~ 133 (439)
T TIGR02472 72 -----APGARIVRLPFGPR-RYLRKELLWPYLDELADNLLQHLRQQ------------GHLPDLIHAHYADAGYVGARLS 133 (439)
T ss_pred -----CCCcEEEEecCCCC-CCcChhhhhhhHHHHHHHHHHHHHHc------------CCCCCEEEEcchhHHHHHHHHH
Confidence 26999999998766 45555556666666655555544321 1369999999988899999999
Q ss_pred ccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHH
Q 002665 167 GALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 246 (895)
Q Consensus 167 ~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~ 246 (895)
+..++|+|+|.|+++......+...+. ....+...+.+..++..|+..++.+|.||++|..+..+.+..+....+.
T Consensus 134 ~~~~~p~V~t~H~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~--- 209 (439)
T TIGR02472 134 RLLGVPLIFTGHSLGREKRRRLLAAGL-KPQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEEQYALYDSYQPE--- 209 (439)
T ss_pred HHhCCCEEEecccccchhhhhcccCCC-ChhhhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHHHHHhccCCCcc---
Confidence 999999999999875543222222222 2222333344455555688899999999999987766665555444443
Q ss_pred HHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCCC
Q 002665 247 KLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPD 326 (895)
Q Consensus 247 ~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl~ 326 (895)
++.+||||||++.|.+..... ........++++...++.++|+++||+.
T Consensus 210 ------------------ki~vIpnGvd~~~f~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~i~~vGrl~ 258 (439)
T TIGR02472 210 ------------------RMQVIPPGVDLSRFYPPQSSE-------------ETSEIDNLLAPFLKDPEKPPILAISRPD 258 (439)
T ss_pred ------------------ceEEECCCcChhhcCCCCccc-------------cchhHHHHHHhhccccCCcEEEEEcCCc
Confidence 899999999999987643111 0111222334455567788999999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhh
Q 002665 327 PKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAA 406 (895)
Q Consensus 327 ~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~ 406 (895)
+.||++.+|+|+..+......+++++++|++++...+.....++..++..+++++++.++|.|+|+++.++++.+|+.|+
T Consensus 259 ~~Kg~~~li~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~~~~~~~~~~a~ 338 (439)
T TIGR02472 259 RRKNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPELYRLAA 338 (439)
T ss_pred ccCCHHHHHHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCHHHHHHHHHHHh
Confidence 99999999999987643344466766778888776766655666777888899999999999999999999999999875
Q ss_pred cCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHhhCHHHHHHHHHHHH
Q 002665 407 KTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGL 486 (895)
Q Consensus 407 ~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~ 486 (895)
.++|+||+||..|+||++++||||||+|||+|+.||..|++.++.+|++|+|.|+++++++|.+++++++.+++++++++
T Consensus 339 ~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~~~a~ 418 (439)
T TIGR02472 339 RSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSDSSQWQLWSRNGI 418 (439)
T ss_pred hcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 55589999999999999999999999999999999999999998999999999999999999999999999999999999
Q ss_pred HHH-hhCCHHHHHHHHHHHHH
Q 002665 487 KNI-HQFSWPEHCKSYLSRIS 506 (895)
Q Consensus 487 ~~v-~~~s~~~~a~~~~~~l~ 506 (895)
+++ ++|||+.++++|+++++
T Consensus 419 ~~~~~~fsw~~~~~~~~~l~~ 439 (439)
T TIGR02472 419 EGVRRHYSWDAHVEKYLRILQ 439 (439)
T ss_pred HHHHHhCCHHHHHHHHHHHhC
Confidence 998 69999999999998863
No 5
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=100.00 E-value=6.5e-53 Score=509.33 Aligned_cols=551 Identities=14% Similarity=0.122 Sum_probs=392.0
Q ss_pred HHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHHhcc-CCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHH
Q 002665 128 HIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGA-LNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIM 206 (895)
Q Consensus 128 ~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~~~~-~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 206 (895)
..+.+++.+.+... .-|+|..|.+....++..+.++ ...++-|..|-.+|..--... +....
T Consensus 119 vN~~fA~~~~~~~~-----~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH~pfP~~~~f~~---------lp~~~--- 181 (726)
T PRK14501 119 VNQRFAEAIAAIAR-----PGDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFPSFEVFRL---------LPWRE--- 181 (726)
T ss_pred HHHHHHHHHHHhcC-----CCCEEEEeCchhhhHHHHHHhhCCCCcEEEEeeCCCCChHHHhh---------CCChH---
Confidence 33445555555322 2589999998766666666554 467899999988775421100 00000
Q ss_pred HhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHHHHHh-HhccccccCCCCCCeEEeCCCCcCCCcccCCCCC
Q 002665 207 RRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRAR-IKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDV 285 (895)
Q Consensus 207 ~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~-~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~ 285 (895)
.-...+..+|.|-..+...++.+..... +.|+.. ...++...|+.. ++.++|+|||++.|.+.....
T Consensus 182 ----~ll~~ll~~Dligf~t~~~~r~Fl~~~~-------~~l~~~~~~~~~~~~gr~~-~v~v~p~GID~~~f~~~~~~~ 249 (726)
T PRK14501 182 ----EILEGLLGADLIGFHTYDYVRHFLSSVL-------RVLGYETELGEIRLGGRIV-RVDAFPMGIDYDKFHNSAQDP 249 (726)
T ss_pred ----HHHHHHhcCCeEEeCCHHHHHHHHHHHH-------HHcCCccCCCeEEECCEEE-EEEEEECeEcHHHHHHHhcCc
Confidence 1123577899999999988877655321 222211 233566667766 799999999999997643111
Q ss_pred CCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEE-EEe----cC-
Q 002665 286 DGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMG----NR- 357 (895)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~--~l~l-ivG----~~- 357 (895)
........++.. .+++++|+++||+++.||+..+++||+++++.+|++ ++++ ++| ++
T Consensus 250 -------------~~~~~~~~lr~~--~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~~ 314 (726)
T PRK14501 250 -------------EVQEEIRRLRQD--LRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGV 314 (726)
T ss_pred -------------hHHHHHHHHHHH--cCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcch
Confidence 000011112222 257789999999999999999999999997655543 3443 343 22
Q ss_pred CCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHc-----C
Q 002665 358 DDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAY-----G 432 (895)
Q Consensus 358 ~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~-----G 432 (895)
+.+++++....+.+++|+..+++.++.+.++|.+.++.++++++|+.| ||||+||.+||||++++||||| |
T Consensus 315 ~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~a----Dv~v~~S~~EG~~lv~~Eama~~~~~~g 390 (726)
T PRK14501 315 PQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAA----DVALVTPLRDGMNLVAKEYVASRTDGDG 390 (726)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhc----cEEEecccccccCcccceEEEEcCCCCc
Confidence 566788888888888999988888888889999999999999999999 9999999999999999999999 6
Q ss_pred CCEEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhhhc
Q 002665 433 LPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVS-DKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQR 511 (895)
Q Consensus 433 ~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~-~~~~~~~~~~~~~~~v~~~s~~~~a~~~~~~l~~~~~~ 511 (895)
+||+++..|++.++. .|++|||+|+++++++|.++|+ +++++..+.+.+++++++|||+.|+++|++.|+++...
T Consensus 391 ~~vls~~~G~~~~l~----~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~~~~~ 466 (726)
T PRK14501 391 VLILSEMAGAAAELA----EALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELREAAEK 466 (726)
T ss_pred eEEEecccchhHHhC----cCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 789999999999884 5999999999999999999998 45677777888999999999999999999999988654
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCcchhhhhccchhhhHHHHHHhhccccCCc
Q 002665 512 QPRWQRSDDGLDNSESDSPGDSWRDIHDLSLNLKLSLEGDKNEGGSTLDNSLDTEENAVTGKNKLENAVLALSNRTIGGT 591 (895)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (895)
+..... ..+ .....+.++.+|++
T Consensus 467 ~~~~~~--------------------~~~-------------------------------~~~~~~~~~~~y~~------ 489 (726)
T PRK14501 467 NKAFAS--------------------KPI-------------------------------TPAAAEEIIARYRA------ 489 (726)
T ss_pred hhcccc--------------------ccC-------------------------------CccCHHHHHHHHHh------
Confidence 321111 000 12346778899988
Q ss_pred ccCcccccCCCCcccccccEEEEEEecCCCCh--------hhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHH
Q 002665 592 QKADHNVASGKFPALRRRKYVFVIAADCDTTS--------DFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLV 663 (895)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~~kli~~DiDGTL~~--------~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~ 663 (895)
+++|+|++|+||||+. .+++.+.++|++|.++ +|+.|+|+|||++..+.+++.
T Consensus 490 ----------------~~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d---~g~~V~ivSGR~~~~l~~~~~ 550 (726)
T PRK14501 490 ----------------ASRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAAD---PNTDVAIISGRDRDTLERWFG 550 (726)
T ss_pred ----------------ccceEEEEecCccccCCCCCcccCCCCHHHHHHHHHHHcC---CCCeEEEEeCCCHHHHHHHhC
Confidence 7899999999999952 3678999999999995 349999999999999999998
Q ss_pred hCCCCCCCCCEEEeCCCceEecCCCCCCCCCCCCcccCcchhhh--hccccCcchHHHHHHHHhhhccCCCCccCccccc
Q 002665 664 SGGLSPLAFDAFICNSGSELYYPSSSTEDNHGLPFLVDLDYRFH--TEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEE 741 (895)
Q Consensus 664 ~l~l~~~~~d~~I~~nGa~I~~~~~~~~~~~~~~~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (895)
.+++ ++|++||++|+..+. .|... ....| .+.+..+++.+........ .+
T Consensus 551 ~~~l------~liaenG~~i~~~~~--------------~w~~~~~~~~~w-~~~v~~il~~~~~~~~gs~-------ie 602 (726)
T PRK14501 551 DLPI------HLVAEHGAWSRAPGG--------------EWQLLEPVATEW-KDAVRPILEEFVDRTPGSF-------IE 602 (726)
T ss_pred CCCe------EEEEeCCEEEeCCCC--------------ceEECCCcchhH-HHHHHHHHHHHHhcCCCcE-------EE
Confidence 7665 699999999986431 12111 12234 2344444433332211110 01
Q ss_pred ccccccceEEEEEecCCCCCc---CHHHHHHHHHhh--cCeEEEEEeeCCeeEEeecCCCChHHHHHHHHHHhCCCcccE
Q 002665 742 DESRSTIHCYAFEVTNPQMIP---PVKELRKLMRIQ--ALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNV 816 (895)
Q Consensus 742 ~~~~~~~~k~~~~~~~~~~~~---~~~~l~~~l~~~--~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~lgi~~~~v 816 (895)
....+++|++++.+... ..+++...+... ...+.++ +++ +++||+|+++|||.|++.|++ +++++.+
T Consensus 603 ----~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~-~g~-~~veV~p~~vnKG~al~~ll~--~~~~d~v 674 (726)
T PRK14501 603 ----EKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVL-RGN-KVVEVRPAGVNKGRAVRRLLE--AGPYDFV 674 (726)
T ss_pred ----EcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEE-ECC-eEEEEEECCCCHHHHHHHHHh--cCCCCEE
Confidence 11356777775433111 123455555442 2234433 344 499999999999999999999 7778888
Q ss_pred EEEeCcCCCccccccccCc---ceEEEEcCch
Q 002665 817 VVIAGECGDTDYEGLLGGV---HKTVILKGVG 845 (895)
Q Consensus 817 iafgGD~nn~D~~~Ml~~a---g~gVaMgNA~ 845 (895)
++ +||+.| | ++||+.+ +.+|+|||+.
T Consensus 675 l~-~GD~~n-D-e~Mf~~~~~~~~~v~vG~~~ 703 (726)
T PRK14501 675 LA-IGDDTT-D-EDMFRALPETAITVKVGPGE 703 (726)
T ss_pred EE-ECCCCC-h-HHHHHhcccCceEEEECCCC
Confidence 88 666666 6 9999986 7999999866
No 6
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=100.00 E-value=1.3e-52 Score=502.49 Aligned_cols=567 Identities=14% Similarity=0.102 Sum_probs=412.5
Q ss_pred cEEEeccCCchHHHHHHhcc-CCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCH
Q 002665 149 VAIHGHYADAGDAAALLSGA-LNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTR 227 (895)
Q Consensus 149 DvIh~h~~~~~~~~~~~~~~-~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~ 227 (895)
|+|..|.+....++..+.++ ...++-|..|..+|..- + |+..-+...-...+-.||.|-..|.
T Consensus 203 d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~e--i--------------fr~LP~r~eiL~glL~aDlIGFht~ 266 (854)
T PLN02205 203 DFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE--I--------------YKTLPIREELLRALLNSDLIGFHTF 266 (854)
T ss_pred CEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCChH--H--------------HhhCCcHHHHHHHHhcCCeEEecCH
Confidence 89999988766666666554 46789999998877541 1 1111111112335779999999999
Q ss_pred HHHHHHHHHhcCCChHHHHHHHHhH--h---ccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCc
Q 002665 228 QEIEEQWRLYDGFDPVLERKLRARI--K---RGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPP 302 (895)
Q Consensus 228 ~~~~~~~~~y~~~~~~~~~~l~~~~--~---~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 302 (895)
..++.+.... .++|+... . .|+++.||.+ ++.++|.|||+..|....... ....
T Consensus 267 ~yar~Fl~~~-------~r~lgl~~~~~~g~~~~~~~Gr~v-~v~~~PigId~~~~~~~~~~~-------------~~~~ 325 (854)
T PLN02205 267 DYARHFLSCC-------SRMLGLSYESKRGYIGLEYYGRTV-SIKILPVGIHMGQLQSVLSLP-------------ETEA 325 (854)
T ss_pred HHHHHHHHHH-------HHHhCCcccCCCcceeEEECCcEE-EEEEEeCeEcHHHHHHHhcCh-------------hHHH
Confidence 9888776532 23443332 2 3677788888 899999999999886432111 1112
Q ss_pred hhhhhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEEE--E----ecCCCchhhhhhhHHHHHHH
Q 002665 303 IWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTLI--M----GNRDDIDEMSGTNAALLLSI 374 (895)
Q Consensus 303 ~~~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~--~l~li--v----G~~~~~~~l~~~~~~~~~~i 374 (895)
..++++..+..+++++|+.++|+|+.|||...+.||++|++.+|.+ +++|| + +.+++|++++.+..+.+++|
T Consensus 326 ~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~rI 405 (854)
T PLN02205 326 KVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRI 405 (854)
T ss_pred HHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHHHHHHH
Confidence 2233333332346899999999999999999999999998878877 45443 2 45678999999999999999
Q ss_pred HHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHc--------------------CCC
Q 002665 375 LKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAY--------------------GLP 434 (895)
Q Consensus 375 ~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~--------------------G~P 434 (895)
|+.+++.+|.|.+++.+.++++++.++|+.| ||+++||++|||||+++||++| |+.
T Consensus 406 N~~fg~~~~~Pv~~~~~~~~~~e~~aly~~A----Dv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvL 481 (854)
T PLN02205 406 NETFGKPGYDPIVLIDAPLKFYERVAYYVVA----ECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSML 481 (854)
T ss_pred HhhcCCCCCceEEEEecCCCHHHHHHHHHhc----cEEEeccccccccccchheeEEccCccccccccccccccCCCCce
Confidence 9999999999999999999999999999999 9999999999999999999986 679
Q ss_pred EEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhhhcCC
Q 002665 435 IVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVS-DKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQRQP 513 (895)
Q Consensus 435 Vvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~-~~~~~~~~~~~~~~~v~~~s~~~~a~~~~~~l~~~~~~~~ 513 (895)
|||+.+|+..++ ..+++|||+|++++|+||.++|+ ++++++.+.+.++++++.++...|++.|++.+++....+.
T Consensus 482 iLSEfaGaa~~L----~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~~~~~~ 557 (854)
T PLN02205 482 VVSEFIGCSPSL----SGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHS 557 (854)
T ss_pred EeeeccchhHHh----CcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHh
Confidence 999999999988 56999999999999999999999 8889999999999999999999999999999998754321
Q ss_pred CCCCCCCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCcchhhhhccchhhhHHHHHHhhccccCCccc
Q 002665 514 RWQRSDDGLDNSESDSPGDSWRDIHDLSLNLKLSLEGDKNEGGSTLDNSLDTEENAVTGKNKLENAVLALSNRTIGGTQK 593 (895)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (895)
.... -.+.+++++.+ +++++.+.+...++++.+|++
T Consensus 558 ~~~~--------------------~~~g~g~~~~~----------------~~~~~~~~~l~~~~i~~~y~~-------- 593 (854)
T PLN02205 558 RRRC--------------------WGIGFGLSFRV----------------VALDPNFRKLSMEHIVSAYKR-------- 593 (854)
T ss_pred hhhh--------------------ccccccccccc----------------ccccccccccCHHHHHHHHHh--------
Confidence 1111 00112222222 566777778889999999999
Q ss_pred CcccccCCCCcccccccEEEEEEecCCCC------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCC-
Q 002665 594 ADHNVASGKFPALRRRKYVFVIAADCDTT------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGG- 666 (895)
Q Consensus 594 ~~~~~~~~~~~~~~~~~kli~~DiDGTL~------~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~- 666 (895)
+++|+|++|+||||. ..+++.+.++|++|.+. +++.|+|+|||++..+.+++..+.
T Consensus 594 --------------~~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d---~g~~VaIvSGR~~~~L~~~f~~~~~ 656 (854)
T PLN02205 594 --------------TTTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRD---KNNMVFIVSARSRKTLADWFSPCEK 656 (854)
T ss_pred --------------hcCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhc---CCCEEEEEeCCCHHHHHHHhCCCCC
Confidence 789999999999994 25678899999998665 469999999999999999997753
Q ss_pred CCCCCCCEEEeCCCceEecCCCCCCCCCC-CCcccCcchhhhhccccCcchHHHHHHHHhhhccCCCCccCccccccccc
Q 002665 667 LSPLAFDAFICNSGSELYYPSSSTEDNHG-LPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESR 745 (895)
Q Consensus 667 l~~~~~d~~I~~nGa~I~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (895)
+ ++|++||+++...+.. .|. .....+..|...+ ...++.+.++.++++.+.+
T Consensus 657 l------~laaEHG~~ir~~~~~---~w~~~~~~~~~~w~~~v-----~~i~~~y~ertpGs~IE~K------------- 709 (854)
T PLN02205 657 L------GIAAEHGYFLRLKRDV---EWETCVPVADCSWKQIA-----EPVMQLYTETTDGSTIEDK------------- 709 (854)
T ss_pred e------EEEEeCCEEEEeCCCc---eeeecchhhhHHHHHHH-----HHHHHHHhcCCCchhheec-------------
Confidence 4 6999999999865310 000 0000111222111 1122233444455555543
Q ss_pred ccceEEEEEecCCCCCc---CHHHHHHHHHhhcCe-EEEEEeeCCeeEEeecCCCChHHHHHHHHH---HhCCCcccEEE
Q 002665 746 STIHCYAFEVTNPQMIP---PVKELRKLMRIQALR-CHVIYCQNGTKLHVIPVLASRSQALRYLHV---RWGIDLSNVVV 818 (895)
Q Consensus 746 ~~~~k~~~~~~~~~~~~---~~~~l~~~l~~~~~~-~~~~~s~~~~~lEI~p~g~sKg~al~~L~~---~lgi~~~~via 818 (895)
...++|++++.+... ..+++...+.....+ ...+.++. +++||+|+|+|||.|++.|++ .+|++++.+++
T Consensus 710 --~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~-~vvEV~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~ 786 (854)
T PLN02205 710 --ETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQ-NIVEVKPQGVSKGLVAKRLLSIMQERGMLPDFVLC 786 (854)
T ss_pred --ceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECC-cEEEEEeCCCCHHHHHHHHHHHHHhcCCCcccEEE
Confidence 567888886543111 123455555432111 12244555 499999999999999999975 46999999988
Q ss_pred EeCcCCCccccccccCcc--------------eEEEEcCchhhhHhhhhcCCCCCCC
Q 002665 819 IAGECGDTDYEGLLGGVH--------------KTVILKGVGESARKLHANRNYSLED 861 (895)
Q Consensus 819 fgGD~nn~D~~~Ml~~ag--------------~gVaMgNA~~~~~~~~~~~~~~~~~ 861 (895)
+||+.| | ++||+.++ .+|-+| .+++.+.|++++
T Consensus 787 -~GDD~n-D-edMF~~~~~~~~g~~~~~~~~~~~v~VG-------~~~S~A~y~L~d 833 (854)
T PLN02205 787 -IGDDRS-D-EDMFEVITSSMAGPSIAPRAEVFACTVG-------QKPSKAKYYLDD 833 (854)
T ss_pred -EcCCcc-H-HHHHHHhhhhccCCcccccccceeEEEC-------CCCccCeEecCC
Confidence 555555 6 99999886 334444 356777677666
No 7
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=3.9e-51 Score=491.12 Aligned_cols=534 Identities=13% Similarity=0.080 Sum_probs=390.7
Q ss_pred CcEEEeccCCchHHHHHHhcc-CCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecC
Q 002665 148 PVAIHGHYADAGDAAALLSGA-LNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITST 226 (895)
Q Consensus 148 pDvIh~h~~~~~~~~~~~~~~-~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s 226 (895)
-|+|..|.+....++..+.++ ...++.|..|..++..-. + +..-+...-...+-.||.|-..|
T Consensus 148 ~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPFPs~e~-f---------------r~lp~r~~il~gll~aDligF~t 211 (797)
T PLN03063 148 GDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPSSEI-Y---------------KTLPSRSELLRAVLTADLIGFHT 211 (797)
T ss_pred CCEEEEecchhhhHHHHHHHhCCCCcEEEEecCCCCCHHH-H---------------hhCCCHHHHHHHHhcCCEEEeCC
Confidence 489999988666666666554 568999999988775411 1 10000001123577999999999
Q ss_pred HHHHHHHHHHhcCCChHHHHHHHHh-HhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhh
Q 002665 227 RQEIEEQWRLYDGFDPVLERKLRAR-IKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWS 305 (895)
Q Consensus 227 ~~~~~~~~~~y~~~~~~~~~~l~~~-~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (895)
...++.+.... .++|+.. ...++...|+.. ++.+||+|||+..|.+..... .......
T Consensus 212 ~~y~r~Fl~~~-------~r~l~~~~~~~~i~~~gr~~-~I~viP~GID~~~f~~~~~~~-------------~~~~~~~ 270 (797)
T PLN03063 212 YDFARHFLSAC-------TRILGVEGTHEGVVDQGKVT-RVAVFPIGIDPERFINTCELP-------------EVKQHMK 270 (797)
T ss_pred HHHHHHHHHHH-------HHHhCccccCCceEECCeEE-EEEEEecccCHHHHHHHhcCh-------------hHHHHHH
Confidence 99888776532 1233222 234566677777 899999999999886532110 0001111
Q ss_pred hhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc--EEEEE------ecCCCchhhhhhhHHHHHHHHHH
Q 002665 306 EIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELAN--LTLIM------GNRDDIDEMSGTNAALLLSILKL 377 (895)
Q Consensus 306 ~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~--l~liv------G~~~~~~~l~~~~~~~~~~i~~~ 377 (895)
.+++. ..++++|+++||+++.||+..+|+||+++++.+|.+. ++|+. |+++.+++++....++.++++..
T Consensus 271 ~lr~~--~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~ 348 (797)
T PLN03063 271 ELKRF--FAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGR 348 (797)
T ss_pred HHHHh--cCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcc
Confidence 22222 2468899999999999999999999999987677653 55432 34567788888888888889988
Q ss_pred HHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCC----EEEcCCCCcccccccCCce
Q 002665 378 IDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLP----IVATKNGGPVDIHRVLDNG 453 (895)
Q Consensus 378 ~~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~P----Vvat~~gg~~eiv~~~~~g 453 (895)
++..++.+.+++.+.++.+++.++|+.| ||||+||++||||++++||||||+| +|+|..+|..+.+ +.+|
T Consensus 349 ~g~~~~~pv~~l~~~v~~~el~aly~~A----DvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l--~~~a 422 (797)
T PLN03063 349 FGSVSSVPIHHLDCSVDFNYLCALYAIT----DVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSL--GAGA 422 (797)
T ss_pred cccCCCceeEEecCCCCHHHHHHHHHhC----CEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCchhhh--cCCe
Confidence 8888999989999999999999999999 9999999999999999999999998 8888877777765 3579
Q ss_pred EEeCCCCHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCCCCCCC
Q 002665 454 LLVDPHDQQSIADALLKLVS-DKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQRQPRWQRSDDGLDNSESDSPGD 532 (895)
Q Consensus 454 ~lv~p~d~~~la~ai~~ll~-~~~~~~~~~~~~~~~v~~~s~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (895)
++|||+|+++++++|.++|+ ++++++++.+.+++++++++|..|++.|++.|+++...+.....
T Consensus 423 llVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~~~~~~~~--------------- 487 (797)
T PLN03063 423 LLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIVEAELRTR--------------- 487 (797)
T ss_pred EEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhhhhhhccc---------------
Confidence 99999999999999999999 88999999999999999999999999999999987654321110
Q ss_pred CccccccccccccccccCCCCCCCCCCCCCcchhhhhccchhhhHHHHHHhhccccCCcccCcccccCCCCcccccccEE
Q 002665 533 SWRDIHDLSLNLKLSLEGDKNEGGSTLDNSLDTEENAVTGKNKLENAVLALSNRTIGGTQKADHNVASGKFPALRRRKYV 612 (895)
Q Consensus 533 ~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl 612 (895)
..+ .......++.+|++ +++++
T Consensus 488 -----~~~-------------------------------~~l~~~~~~~~y~~----------------------a~~rl 509 (797)
T PLN03063 488 -----NIP-------------------------------LELPEQDVIQQYSK----------------------SNNRL 509 (797)
T ss_pred -----CCC-------------------------------CCCCHHHHHHHHHh----------------------ccCeE
Confidence 000 03345678899998 88999
Q ss_pred EEEEecCCCC-----------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCc
Q 002665 613 FVIAADCDTT-----------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGS 681 (895)
Q Consensus 613 i~~DiDGTL~-----------~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa 681 (895)
|++|+||||. ..+++.+.++|++|.+. ++..|+|.|||+...+..++...++ +++++||+
T Consensus 510 l~LDyDGTL~~~~~~~~~p~~a~p~~~l~~~L~~L~~d---~~~~V~IvSGR~~~~L~~~~~~~~l------~l~aeHG~ 580 (797)
T PLN03063 510 LILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSD---PKTTVVVLSRSGKDILDKNFGEYNI------WLAAENGM 580 (797)
T ss_pred EEEecCccccCCCCCccccccCCCCHHHHHHHHHHHcC---CCCEEEEEeCCCHHHHHHHhCCCCC------cEEEeCCE
Confidence 9999999993 12677899999999987 5789999999999999999987766 59999999
Q ss_pred eEecCCCCCCCCCC--CCcccCcchhhhhccccCcchHHHHHHHHhhhccCCCCccCcccccccccccceEEEEEecCCC
Q 002665 682 ELYYPSSSTEDNHG--LPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQ 759 (895)
Q Consensus 682 ~I~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 759 (895)
++...+. .|. .....+..|...+ ...++.+.++.|+++.+.+ ...+.||++..+
T Consensus 581 ~~r~~~~----~w~~~~~~~~~~~w~~~v-----~~~l~~~~~rtpGs~iE~K---------------~~sla~HyR~ad 636 (797)
T PLN03063 581 FLRHTSG----EWVTTMPEHMNLDWVDGV-----KNVFKYFTDRTPRSYVEKS---------------ETSLVWNYEYAD 636 (797)
T ss_pred EEecCCC----ceeeccccccChhHHHHH-----HHHHHHHHHhCCCcEEEEc---------------CeEEEEEcCCCC
Confidence 9875321 010 0001122333222 1245667778888877766 578899987653
Q ss_pred CC---cCHHHHHHHHHhh---cCeEEEEEeeCCeeEEeecCCCChHHHHHHHHHHh------CCCcccEEEEeCc-CCCc
Q 002665 760 MI---PPVKELRKLMRIQ---ALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRW------GIDLSNVVVIAGE-CGDT 826 (895)
Q Consensus 760 ~~---~~~~~l~~~l~~~---~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~l------gi~~~~viafgGD-~nn~ 826 (895)
.. ....++..++.+. ...+.++ .+.+.+||.|.|+|||.|++.|++++ +.+.+=++| +|| ..+
T Consensus 637 p~~g~~~a~el~~~l~~~~~~~~~~~v~--~Gk~vvEvrp~gvnKG~Av~~ll~~~~~~~~~~~~~dfvl~-~Gdd~~~- 712 (797)
T PLN03063 637 VEFGRAQARDMLQHLWAGPISNASVDVV--RGQKSVEVHAIGVTKGAAIGRILGEIVHNKSMTTPIDFVFC-SGYFLEK- 712 (797)
T ss_pred hHHHHHHHHHHHHHHHHhhccCCCcEEE--ECCeEEEEEcCCCChHHHHHHHHHHhhhccccCCCCCEEEE-eCCCCCC-
Confidence 21 2334555555221 1234443 34459999999999999999999986 223334555 666 466
Q ss_pred cccccccCcce
Q 002665 827 DYEGLLGGVHK 837 (895)
Q Consensus 827 D~~~Ml~~ag~ 837 (895)
| ++||+..+.
T Consensus 713 D-EdmF~~l~~ 722 (797)
T PLN03063 713 D-EDVYTFFEP 722 (797)
T ss_pred c-HHHHHhccc
Confidence 8 999998763
No 8
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=5.5e-49 Score=467.13 Aligned_cols=547 Identities=13% Similarity=0.112 Sum_probs=400.0
Q ss_pred HHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHHhcc-CCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHh
Q 002665 130 IQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGA-LNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRR 208 (895)
Q Consensus 130 ~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~~~~-~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r 208 (895)
+.++..+.+... .-|+|.+|.+....++..+.++ ...++-|.+|..++..-- + +..-+
T Consensus 219 ~~FA~~i~~~~~-----~gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiPFPs~Ei-f---------------r~LP~ 277 (934)
T PLN03064 219 QMFADVVNEHYE-----EGDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSSEI-H---------------RTLPS 277 (934)
T ss_pred HHHHHHHHHhcC-----CCCEEEEecchhhHHHHHHHHhCCCCcEEEEecCCCCChHH-H---------------hhCCc
Confidence 345555554322 2489999998766666666654 467899999988765411 1 11111
Q ss_pred HHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHHHHHh-HhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCC
Q 002665 209 IEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRAR-IKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDG 287 (895)
Q Consensus 209 ~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~-~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~ 287 (895)
...-...+-.||+|-..|...++.+.... .++|+.. ...||...||.+ +|.++|.|||++.|.......
T Consensus 278 r~elL~glL~aDlIGFqT~~y~rhFl~~c-------~rlLg~~~~~~~v~~~Gr~v-~V~~~PiGID~~~f~~~~~~~-- 347 (934)
T PLN03064 278 RSELLRSVLAADLVGFHTYDYARHFVSAC-------TRILGLEGTPEGVEDQGRLT-RVAAFPIGIDSDRFIRALETP-- 347 (934)
T ss_pred HHHHHHHHhcCCeEEeCCHHHHHHHHHHH-------HHHhCccccCCeEEECCEEE-EEEEEeCEEcHHHHHHHhcCh--
Confidence 11122357789999999999888776532 2333322 234677788887 899999999999997532111
Q ss_pred cccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc--EEEE---E---ecCCC
Q 002665 288 EVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELAN--LTLI---M---GNRDD 359 (895)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~--l~li---v---G~~~~ 359 (895)
........++... .++++|+++||+++.|||...++||++|++.+|.+. ++|+ + ++++.
T Consensus 348 -----------~v~~~~~~lr~~~--~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~e 414 (934)
T PLN03064 348 -----------QVQQHIKELKERF--AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPE 414 (934)
T ss_pred -----------hHHHHHHHHHHHh--CCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCcHH
Confidence 1111222333322 468899999999999999999999999987777763 5443 1 56678
Q ss_pred chhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHc-----CCC
Q 002665 360 IDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAY-----GLP 434 (895)
Q Consensus 360 ~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~-----G~P 434 (895)
|++++.+..+.+++||..+++.+|.|.+++...++++++.++|+.| ||+|+||++|||||+++||||| |++
T Consensus 415 Y~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~A----DV~lvTslrDGmNLva~Eyva~~~~~~GvL 490 (934)
T PLN03064 415 YQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVT----DVALVTSLRDGMNLVSYEFVACQDSKKGVL 490 (934)
T ss_pred HHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhC----CEEEeCccccccCchHHHHHHhhcCCCCCe
Confidence 8999999999999999999999999999999999999999999999 9999999999999999999999 889
Q ss_pred EEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhhhcCC
Q 002665 435 IVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVS-DKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQRQP 513 (895)
Q Consensus 435 Vvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~-~~~~~~~~~~~~~~~v~~~s~~~~a~~~~~~l~~~~~~~~ 513 (895)
||+...|+..++ +..|++|||+|+++++++|.++|+ ++++++++.+.+++++..+||..|++.|++.+++....+.
T Consensus 491 ILSEfaGaa~~L---~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L~~~~~~~~ 567 (934)
T PLN03064 491 ILSEFAGAAQSL---GAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVSELNDTVVEAQ 567 (934)
T ss_pred EEeCCCchHHHh---CCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHhhhh
Confidence 998888887777 347999999999999999999999 9999999999999999999999999999999988754321
Q ss_pred CCCCCCCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCcchhhhhccchhhhHHHHHHhhccccCCccc
Q 002665 514 RWQRSDDGLDNSESDSPGDSWRDIHDLSLNLKLSLEGDKNEGGSTLDNSLDTEENAVTGKNKLENAVLALSNRTIGGTQK 593 (895)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (895)
.... +.. .....+.++.+|++
T Consensus 568 ~~~~--------------------~~~-------------------------------~~l~~~~~~~~y~~-------- 588 (934)
T PLN03064 568 LRTR--------------------QVP-------------------------------PQLPPEDAIQRYLQ-------- 588 (934)
T ss_pred cccc--------------------ccC-------------------------------CCCCHHHHHHHHHh--------
Confidence 1110 000 03446778899998
Q ss_pred CcccccCCCCcccccccEEEEEEecCCCC-----h------------hhHHHHHHHHHHHhccCCCCceEEEEEcCCCHH
Q 002665 594 ADHNVASGKFPALRRRKYVFVIAADCDTT-----S------------DFLEIIKKVVEAAGKDNSAGFIGFVLSTALTIL 656 (895)
Q Consensus 594 ~~~~~~~~~~~~~~~~~kli~~DiDGTL~-----~------------~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~ 656 (895)
+++++||+|+||||. . .+++.+.++|+.|.+. ++..|+|.|||+..
T Consensus 589 --------------a~~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~d---p~n~VaIVSGR~~~ 651 (934)
T PLN03064 589 --------------SNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSD---PKTTIVVLSGSDRS 651 (934)
T ss_pred --------------ccceEEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhC---CCCeEEEEeCCCHH
Confidence 789999999999993 1 1457789999999987 57899999999999
Q ss_pred HHHHHHHhCCCCCCCCCEEEeCCCceEecCCCCCCCCCC--CCcccCcchhhhhccccCcchHHHHHHHHhhhccCCCCc
Q 002665 657 ELHSLLVSGGLSPLAFDAFICNSGSELYYPSSSTEDNHG--LPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGE 734 (895)
Q Consensus 657 ~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (895)
.+..++..+++ +++++||+++...+. .|. .....+..|...+ ...++.+.+++|+++.+.+
T Consensus 652 ~Le~~fg~~~L------~LaAEHG~~~R~~~~----~w~~~~~~~~~~~W~~~v-----~~ile~~~eRtPGS~IE~K-- 714 (934)
T PLN03064 652 VLDENFGEFDM------WLAAENGMFLRHTKG----EWMTTMPEHLNMDWVDSV-----KHVFEYFTERTPRSHFETR-- 714 (934)
T ss_pred HHHHHhCCCCc------eEEeeCCeEEecCCC----cceeccccccchHHHHHH-----HHHHHHHHhcCCCcEEEEc--
Confidence 99999988876 699999999876431 110 0001122333222 1245667778888877766
Q ss_pred cCcccccccccccceEEEEEecCCCCC---cCHHHHHHHHHh-h--cCeEEEEEeeCCeeEEeecCCCChHHHHHHHHHH
Q 002665 735 EGKIVEEDESRSTIHCYAFEVTNPQMI---PPVKELRKLMRI-Q--ALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVR 808 (895)
Q Consensus 735 ~~~~~~~~~~~~~~~k~~~~~~~~~~~---~~~~~l~~~l~~-~--~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~ 808 (895)
...+.||++..+.. ....++.+++.. . ...+.++ .+.+.+||.|.|+|||.|++.|+++
T Consensus 715 -------------~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~--~Gk~VVEVrP~gvnKG~Av~~ll~~ 779 (934)
T PLN03064 715 -------------ETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVV--QGSRSVEVRPVGVTKGAAIDRILGE 779 (934)
T ss_pred -------------CcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEE--eCCeEEEEEcCCCCHHHHHHHHHHh
Confidence 56889998765311 113455555522 1 1234443 3445999999999999999999997
Q ss_pred hC----C-CcccEEEEeCcCCCccccccccCcc
Q 002665 809 WG----I-DLSNVVVIAGECGDTDYEGLLGGVH 836 (895)
Q Consensus 809 lg----i-~~~~viafgGD~nn~D~~~Ml~~ag 836 (895)
+. . ..-++|.++||+..+| ++||++..
T Consensus 780 ~~~~~~~~~~~DFvlc~GDd~~~D-EdmF~~l~ 811 (934)
T PLN03064 780 IVHSKSMTTPIDYVLCIGHFLGKD-EDIYTFFE 811 (934)
T ss_pred hhhccccCCCCCEEEEeCCCCCCc-HHHHHHHh
Confidence 62 1 1224555566653237 99999764
No 9
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=100.00 E-value=2.8e-40 Score=377.53 Aligned_cols=402 Identities=25% Similarity=0.346 Sum_probs=293.6
Q ss_pred EEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhhcc
Q 002665 9 KYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQG 88 (895)
Q Consensus 9 i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 88 (895)
|++|+.|+. +...+-.-+.||+++++.+|+++|+++| |+|+|+|.....+. .+.
T Consensus 1 ~~~~~~~~~----~~~~~~~~~~GG~e~~v~~la~~L~~~G--~~V~v~~~~~~~~~------~~~-------------- 54 (405)
T TIGR03449 1 VAMISMHTS----PLQQPGTGDAGGMNVYILETATELARRG--IEVDIFTRATRPSQ------PPV-------------- 54 (405)
T ss_pred CeEEeccCC----ccccCCCcCCCCceehHHHHHHHHhhCC--CEEEEEecccCCCC------CCc--------------
Confidence 678999986 3333333457999999999999999999 99999997532110 001
Q ss_pred cCCCCCcEEEEecCCCCCccccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHHhcc
Q 002665 89 LGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGA 168 (895)
Q Consensus 89 ~~~~~g~~i~r~~~~~~~~~l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~~~~ 168 (895)
.+..+|+++++++.++. ....+.. +...+..+.....+.+... ...+||+||+|.+..+.++..+++.
T Consensus 55 ~~~~~~~~v~~~~~~~~-~~~~~~~-------~~~~~~~~~~~~~~~~~~~----~~~~~Diih~h~~~~~~~~~~~~~~ 122 (405)
T TIGR03449 55 VEVAPGVRVRNVVAGPY-EGLDKED-------LPTQLCAFTGGVLRAEARH----EPGYYDLIHSHYWLSGQVGWLLRDR 122 (405)
T ss_pred cccCCCcEEEEecCCCc-ccCCHHH-------HHHHHHHHHHHHHHHHhhc----cCCCCCeEEechHHHHHHHHHHHHh
Confidence 11125899999876544 1111111 1111111111111111110 1146999999998778888888888
Q ss_pred CCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHHH
Q 002665 169 LNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKL 248 (895)
Q Consensus 169 ~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l 248 (895)
.++|+|+|.|+++..+...+..... .. ... ....|...++.+|.++++|+...+.+...|+. .+.
T Consensus 123 ~~~p~v~t~h~~~~~~~~~~~~~~~-------~~-~~~-~~~~e~~~~~~~d~vi~~s~~~~~~~~~~~~~-~~~----- 187 (405)
T TIGR03449 123 WGVPLVHTAHTLAAVKNAALADGDT-------PE-PEA-RRIGEQQLVDNADRLIANTDEEARDLVRHYDA-DPD----- 187 (405)
T ss_pred cCCCEEEeccchHHHHHHhccCCCC-------Cc-hHH-HHHHHHHHHHhcCeEEECCHHHHHHHHHHcCC-Chh-----
Confidence 8999999999875432111100000 00 011 11135667899999999999877776555543 222
Q ss_pred HHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCCCCC
Q 002665 249 RARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPK 328 (895)
Q Consensus 249 ~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl~~~ 328 (895)
++.+||||+|.+.|.+.. ......++...+++++|+++||+.+.
T Consensus 188 ----------------ki~vi~ngvd~~~~~~~~--------------------~~~~~~~~~~~~~~~~i~~~G~l~~~ 231 (405)
T TIGR03449 188 ----------------RIDVVAPGADLERFRPGD--------------------RATERARLGLPLDTKVVAFVGRIQPL 231 (405)
T ss_pred ----------------hEEEECCCcCHHHcCCCc--------------------HHHHHHhcCCCCCCcEEEEecCCCcc
Confidence 899999999998875421 11122334445678999999999999
Q ss_pred CCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhc
Q 002665 329 KNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAK 407 (895)
Q Consensus 329 Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~ 407 (895)
||++.+++|++.+.+..+..++.+ ++|+..... .....++.++++++++.++|.|.|+++.+++..+|+.|
T Consensus 232 K~~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~g------~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~a-- 303 (405)
T TIGR03449 232 KAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSG------LATPDALIELAAELGIADRVRFLPPRPPEELVHVYRAA-- 303 (405)
T ss_pred cCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCc------chHHHHHHHHHHHcCCCceEEECCCCCHHHHHHHHHhC--
Confidence 999999999999865445444654 666532110 01235566788889999999999999999999999999
Q ss_pred CCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHhhCHHHHHHHHHHHHH
Q 002665 408 TKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLK 487 (895)
Q Consensus 408 ~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~ 487 (895)
|++++||..|+||++++|||++|+|||+++.||..|++.++.+|+++++.|+++++++|.+++++++.++++++++++
T Consensus 304 --d~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~ 381 (405)
T TIGR03449 304 --DVVAVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLLDDPRTRIRMGAAAVE 381 (405)
T ss_pred --CEEEECCCCCCcChHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCHHHHHHHHHHHHHHhh
Q 002665 488 NIHQFSWPEHCKSYLSRISSCK 509 (895)
Q Consensus 488 ~v~~~s~~~~a~~~~~~l~~~~ 509 (895)
.+++|||+.++++|+++|.+++
T Consensus 382 ~~~~fsw~~~~~~~~~~y~~~~ 403 (405)
T TIGR03449 382 HAAGFSWAATADGLLSSYRDAL 403 (405)
T ss_pred HHHhCCHHHHHHHHHHHHHHHh
Confidence 8889999999999999999875
No 10
>PRK00654 glgA glycogen synthase; Provisional
Probab=100.00 E-value=3.7e-39 Score=372.98 Aligned_cols=445 Identities=19% Similarity=0.222 Sum_probs=282.9
Q ss_pred eEEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhh
Q 002665 7 NMKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLM 86 (895)
Q Consensus 7 ~~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 86 (895)
|||+|||.+.. |. ..+||...++..|+++|+++| |+|+|+|+.+.. ....... ...+.........
T Consensus 1 m~i~~vs~e~~----P~-----~k~GGl~~~v~~L~~~L~~~G--~~V~v~~p~y~~--~~~~~~~-~~~~~~~~~~~~~ 66 (466)
T PRK00654 1 MKILFVASECA----PL-----IKTGGLGDVVGALPKALAALG--HDVRVLLPGYPA--IREKLRD-AQVVGRLDLFTVL 66 (466)
T ss_pred CeEEEEEcccc----cC-----cccCcHHHHHHHHHHHHHHCC--CcEEEEecCCcc--hhhhhcC-ceEEEEeeeEEEE
Confidence 89999999876 11 349999999999999999999 999999987432 1000000 0000000000000
Q ss_pred cccCCCCCcEEEEecCCCCCccccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHHh
Q 002665 87 QGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLS 166 (895)
Q Consensus 87 ~~~~~~~g~~i~r~~~~~~~~~l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~~ 166 (895)
......+|+++++++.+ .+..+..+..+.+.+.. +.-+-+...+.+.. + ..+|||||+|.|.++.++..++
T Consensus 67 ~~~~~~~gv~v~~v~~~---~~~~~~~~y~~~d~~~r-~~~f~~~~~~~~~~-~----~~~pDiiH~h~w~~~~~~~~l~ 137 (466)
T PRK00654 67 FGHLEGDGVPVYLIDAP---HLFDRPSGYGYPDNGER-FAFFSWAAAEFAEG-L----DPRPDIVHAHDWHTGLIPALLK 137 (466)
T ss_pred EEeEEcCCceEEEEeCH---HHcCCCCCCCCcChHHH-HHHHHHHHHHHHHh-c----CCCCceEEECCcHHHHHHHHHH
Confidence 00112368999988763 33333334433333211 00011111111111 0 1469999999999999988887
Q ss_pred cc-----CCCCEEEEeCCCchhhH---HHHHHhCCCChhhhh-hHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHh
Q 002665 167 GA-----LNVPMVFTGHSLGRDKL---EQLLKQGRLSRDEIN-TTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLY 237 (895)
Q Consensus 167 ~~-----~~ip~v~t~H~~~~~~~---~~~~~~g~~~~~~~~-~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y 237 (895)
+. .++|+|+|.|++..... ..+-..|. ....+. ....+...+...+..+..||.|+++|+...+++...+
T Consensus 138 ~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~~~ 216 (466)
T PRK00654 138 EKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGL-PAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREITTPE 216 (466)
T ss_pred HhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCC-ChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhcccc
Confidence 55 37999999999854210 00100010 100000 0000111223355678999999999998877764322
Q ss_pred cCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCC-CchhhhhhhccCCC-C
Q 002665 238 DGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPD-PPIWSEIMHFFSNP-R 315 (895)
Q Consensus 238 ~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~ 315 (895)
.++. +...|+.+ ..++.+||||||++.|.|.....- ...+........ ......+++++.++ +
T Consensus 217 ~~~g--l~~~~~~~-----------~~ki~vI~NGid~~~~~p~~~~~~--~~~~~~~~~~~k~~~k~~l~~~~gl~~~~ 281 (466)
T PRK00654 217 FGYG--LEGLLRAR-----------SGKLSGILNGIDYDIWNPETDPLL--AANYSADDLEGKAENKRALQERFGLPDDD 281 (466)
T ss_pred CCcC--hHHHHHhc-----------ccCceEecCCCCccccCCccCccc--ccccChhhhhchHHHHHHHHHHhCCCCCC
Confidence 1110 11111111 128999999999999987532110 000100000000 00112234455543 6
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCC
Q 002665 316 KPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQ 395 (895)
Q Consensus 316 ~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~ 395 (895)
.++|+++||+.+.||++.+++|+.++.+ ...++ +++|+++. .+...+.+++.+++. ++.+....+.
T Consensus 282 ~~~i~~vGRl~~~KG~~~li~a~~~l~~--~~~~l-vivG~g~~---------~~~~~l~~l~~~~~~--~v~~~~g~~~ 347 (466)
T PRK00654 282 APLFAMVSRLTEQKGLDLVLEALPELLE--QGGQL-VLLGTGDP---------ELEEAFRALAARYPG--KVGVQIGYDE 347 (466)
T ss_pred CcEEEEeeccccccChHHHHHHHHHHHh--cCCEE-EEEecCcH---------HHHHHHHHHHHHCCC--cEEEEEeCCH
Confidence 7899999999999999999999999853 23344 46677642 123456666777653 4554333345
Q ss_pred CcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccC------CceEEeCCCCHHHHHHHHH
Q 002665 396 SDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVL------DNGLLVDPHDQQSIADALL 469 (895)
Q Consensus 396 ~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~------~~g~lv~p~d~~~la~ai~ 469 (895)
+.+..+|+.| |++|+||.+||||++++|||+||+|+|+++.||..|++.++ .+|++|+|.|+++++++|.
T Consensus 348 ~~~~~~~~~a----Dv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~ 423 (466)
T PRK00654 348 ALAHRIYAGA----DMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALR 423 (466)
T ss_pred HHHHHHHhhC----CEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHHH
Confidence 5577899999 99999999999999999999999999999999999999887 8899999999999999999
Q ss_pred HHhh---CHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhhh
Q 002665 470 KLVS---DKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQ 510 (895)
Q Consensus 470 ~ll~---~~~~~~~~~~~~~~~v~~~s~~~~a~~~~~~l~~~~~ 510 (895)
++++ +++.+.++++++++ +.|||+..+++|+++|++++.
T Consensus 424 ~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~lY~~~~~ 465 (466)
T PRK00654 424 RALELYRQPPLWRALQRQAMA--QDFSWDKSAEEYLELYRRLLG 465 (466)
T ss_pred HHHHHhcCHHHHHHHHHHHhc--cCCChHHHHHHHHHHHHHHhh
Confidence 9886 67777777776653 689999999999999998764
No 11
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=100.00 E-value=1e-38 Score=363.32 Aligned_cols=396 Identities=40% Similarity=0.617 Sum_probs=299.3
Q ss_pred EEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhhc
Q 002665 8 MKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 87 (895)
Q Consensus 8 ~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 87 (895)
||+|+++|+++-+. +..|++||+++++.+|+++|+++| |+|+|+|.....+.. .
T Consensus 1 ~~~~~~~~~~~~~~----~~~~~~GG~~~~~~~l~~~L~~~g--~~V~v~~~~~~~~~~-------~------------- 54 (398)
T cd03800 1 RIALISLHGSPLAQ----PGGADTGGQNVYVLELARALARLG--HEVDIFTRRIDDALP-------P------------- 54 (398)
T ss_pred CeEEEecccccccc----CCCCCCCceeehHHHHHHHHhccC--ceEEEEEecCCcccC-------C-------------
Confidence 58899999874332 235889999999999999999999 999999975321110 0
Q ss_pred ccCCCCCcEEEEecCCCCCccccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHHhc
Q 002665 88 GLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSG 167 (895)
Q Consensus 88 ~~~~~~g~~i~r~~~~~~~~~l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~~~ 167 (895)
.....+++.+++++..+. .+..+..+++++..|...+...+... ..+||+||+|++..++++..+++
T Consensus 55 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~Div~~~~~~~~~~~~~~~~ 121 (398)
T cd03800 55 IVELAPGVRVVRVPAGPA-EYLPKEELWPYLDEFADDLLRFLRRE------------GGRPDLIHAHYWDSGLVALLLAR 121 (398)
T ss_pred ccccccceEEEecccccc-cCCChhhcchhHHHHHHHHHHHHHhc------------CCCccEEEEecCccchHHHHHHh
Confidence 011235888998887655 34445455665555555444444321 02699999999888888888999
Q ss_pred cCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHH
Q 002665 168 ALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERK 247 (895)
Q Consensus 168 ~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~ 247 (895)
..++|+|++.|++.......... .. .+....+...|..+++.||.++++|+...+.+...+....
T Consensus 122 ~~~~~~i~~~h~~~~~~~~~~~~-----~~----~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~------ 186 (398)
T cd03800 122 RLGIPLVHTFHSLGAVKRRHLGA-----AD----TYEPARRIEAEERLLRAADRVIASTPQEAEELYSLYGAYP------ 186 (398)
T ss_pred hcCCceEEEeecccccCCccccc-----cc----ccchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHHccccc------
Confidence 99999999999876543211100 00 0112223335677899999999999988777665554321
Q ss_pred HHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCCCC
Q 002665 248 LRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDP 327 (895)
Q Consensus 248 l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl~~ 327 (895)
.++.+||||+|.+.|.+..... ..+..+...+++++|+++||+.+
T Consensus 187 ----------------~~~~vi~ng~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~i~~~gr~~~ 231 (398)
T cd03800 187 ----------------RRIRVVPPGVDLERFTPYGRAE-------------------ARRARLLRDPDKPRILAVGRLDP 231 (398)
T ss_pred ----------------cccEEECCCCCccceecccchh-------------------hHHHhhccCCCCcEEEEEccccc
Confidence 1689999999998876533110 01222333467899999999999
Q ss_pred CCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhc
Q 002665 328 KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAK 407 (895)
Q Consensus 328 ~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~ 407 (895)
.||++.+++|+..+.+..+..++ +++|++..... ......+....+.+++.+++.|+|+++.+++..+|+.|
T Consensus 232 ~k~~~~ll~a~~~l~~~~~~~~l-~i~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a-- 303 (398)
T cd03800 232 RKGIDTLIRAYAELPELRERANL-VIVGGPRDDIL-----AMDEEELRELARELGVIDRVDFPGRVSREDLPALYRAA-- 303 (398)
T ss_pred ccCHHHHHHHHHHHHHhCCCeEE-EEEECCCCcch-----hhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHHhC--
Confidence 99999999999999654444444 46666543211 11223466777888998999999999999999999999
Q ss_pred CCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHhhCHHHHHHHHHHHHH
Q 002665 408 TKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLK 487 (895)
Q Consensus 408 ~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~ 487 (895)
|++++||..|++|++++|||+||+|||+++.|+..|++.++.+|+++++.|+++++++|.+++++++.++++++++++
T Consensus 304 --di~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~a~~ 381 (398)
T cd03800 304 --DVFVNPALYEPFGLTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDPALRRRLSRAGLR 381 (398)
T ss_pred --CEEEecccccccCcHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988999999999999999999999999999999999999
Q ss_pred HH-hhCCHHHHHHHHH
Q 002665 488 NI-HQFSWPEHCKSYL 502 (895)
Q Consensus 488 ~v-~~~s~~~~a~~~~ 502 (895)
.+ ++|||+.++++|+
T Consensus 382 ~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 382 RARARYTWERVAARLL 397 (398)
T ss_pred HHHHhCCHHHHHHHHh
Confidence 99 7999999999886
No 12
>PLN02939 transferase, transferring glycosyl groups
Probab=100.00 E-value=3.1e-38 Score=369.69 Aligned_cols=453 Identities=17% Similarity=0.171 Sum_probs=294.2
Q ss_pred cceEEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccc-c-c----cc
Q 002665 5 DFNMKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPS-E-M----LN 78 (895)
Q Consensus 5 ~~~~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~-e-~----~~ 78 (895)
.+|+|+||+-.-. |+ ..+||..-++..|.++|++.| |+|.|+++.+..-......+... + . +.
T Consensus 480 ~~mkILfVasE~a----P~-----aKtGGLaDVv~sLPkAL~~~G--hdV~VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~ 548 (977)
T PLN02939 480 SGLHIVHIAAEMA----PV-----AKVGGLADVVSGLGKALQKKG--HLVEIVLPKYDCMQYDQIRNLKVLDVVVESYFD 548 (977)
T ss_pred CCCEEEEEEcccc----cc-----cccccHHHHHHHHHHHHHHcC--CeEEEEeCCCcccChhhhhcccccceEEEEeec
Confidence 4799999997665 33 679999999999999999999 99999999754321110000000 0 0 00
Q ss_pred ccc-chhhhcccCCCCCcEEEEecCC-CCCccccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccC
Q 002665 79 RKN-TENLMQGLGESSGAYIIRIPFG-PKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYA 156 (895)
Q Consensus 79 ~~~-~~~~~~~~~~~~g~~i~r~~~~-~~~~~l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~ 156 (895)
... ....+ ....+|+.++.+... +. .|..+..+..+-+.+. ++..+-+...+.+.. .+++|||||+|.|
T Consensus 549 g~~~~~~v~--~~~~~GV~vyfId~~~~~-~fF~R~~iYg~~Dn~~-RF~~FsrAaLe~~~~-----~~~~PDIIH~HDW 619 (977)
T PLN02939 549 GNLFKNKIW--TGTVEGLPVYFIEPQHPS-KFFWRAQYYGEHDDFK-RFSYFSRAALELLYQ-----SGKKPDIIHCHDW 619 (977)
T ss_pred CceeEEEEE--EEEECCeeEEEEecCCch-hccCCCCCCCCccHHH-HHHHHHHHHHHHHHh-----cCCCCCEEEECCc
Confidence 000 00000 011246777777532 21 2333333332322221 111111112222211 1267999999999
Q ss_pred CchHHHHHHhc------cCCCCEEEEeCCCchhhH---HHHHHhCCCChhhhh---h-HhhHHHhHHHHHhhccccCEEE
Q 002665 157 DAGDAAALLSG------ALNVPMVFTGHSLGRDKL---EQLLKQGRLSRDEIN---T-TYKIMRRIEAEELSLDASEIVI 223 (895)
Q Consensus 157 ~~~~~~~~~~~------~~~ip~v~t~H~~~~~~~---~~~~~~g~~~~~~~~---~-~~~~~~r~~~e~~~~~~ad~vi 223 (895)
.++.++..+.. ..++|+|+|+|++...-. ..+-..|. ....+. . ...+..++..-+..+..||.|+
T Consensus 620 ~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL-~~~~l~~~d~le~~~~~~iN~LK~GIv~AD~Vt 698 (977)
T PLN02939 620 QTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGL-DVHQLDRPDRMQDNAHGRINVVKGAIVYSNIVT 698 (977)
T ss_pred cHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCC-CHHHccChhhhhhccCCchHHHHHHHHhCCeeE
Confidence 99887443322 245899999999853321 11111111 111110 0 0011223333345566899999
Q ss_pred ecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCC-CCc
Q 002665 224 TSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASP-DPP 302 (895)
Q Consensus 224 ~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~-~~~ 302 (895)
|+|+...+++...++ . .++..| +....++.+||||||++.|.|.....-. ..+....... ...
T Consensus 699 TVSptYA~EI~te~G-~--GL~~~L-----------~~~~~Kl~gIlNGID~e~wnPatD~~L~--~~Ys~~dl~GK~~n 762 (977)
T PLN02939 699 TVSPTYAQEVRSEGG-R--GLQDTL-----------KFHSKKFVGILNGIDTDTWNPSTDRFLK--VQYNANDLQGKAAN 762 (977)
T ss_pred eeeHHHHHHHHHHhc-c--chHHHh-----------ccccCCceEEecceehhhcCCccccccc--cccChhhhhhhhhh
Confidence 999999988765321 1 111112 2223489999999999999876532100 0111000000 011
Q ss_pred hhhhhhhccCC---CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHH
Q 002665 303 IWSEIMHFFSN---PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLID 379 (895)
Q Consensus 303 ~~~~~~~~~~~---~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~ 379 (895)
.....++++++ ++.|+|++|||+.+.||++.+++|+..+.. +..++ +|+|+|+.. .+...+..++.
T Consensus 763 K~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~dvqL-VIvGdGp~~--------~~e~eL~~La~ 831 (977)
T PLN02939 763 KAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LGGQF-VLLGSSPVP--------HIQREFEGIAD 831 (977)
T ss_pred hHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cCCEE-EEEeCCCcH--------HHHHHHHHHHH
Confidence 12334456655 357999999999999999999999988753 33333 577888642 23456678888
Q ss_pred HcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccc---------C
Q 002665 380 KYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRV---------L 450 (895)
Q Consensus 380 ~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~---------~ 450 (895)
+++..++|.|.+.++......+|+.| |+||+||++||||++++|||+||+|+|++++||..|+|.+ +
T Consensus 832 ~l~l~drV~FlG~~de~lah~IYAaA----DIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg 907 (977)
T PLN02939 832 QFQSNNNIRLILKYDEALSHSIYAAS----DMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVEL 907 (977)
T ss_pred HcCCCCeEEEEeccCHHHHHHHHHhC----CEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCC
Confidence 89988899999998766678999999 9999999999999999999999999999999999998865 4
Q ss_pred CceEEeCCCCHHHHHHHHHHHhh----CHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhhhc
Q 002665 451 DNGLLVDPHDQQSIADALLKLVS----DKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQR 511 (895)
Q Consensus 451 ~~g~lv~p~d~~~la~ai~~ll~----~~~~~~~~~~~~~~~v~~~s~~~~a~~~~~~l~~~~~~ 511 (895)
.+|++|+|.|+++++++|.+++. +++.|+++++++.+ +.|||+..+++|.++|++++.+
T Consensus 908 ~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am~--~dFSWe~~A~qYeeLY~~ll~~ 970 (977)
T PLN02939 908 RNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDMN--IDFSWDSSASQYEELYQRAVAR 970 (977)
T ss_pred CceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH--hcCCHHHHHHHHHHHHHHHHHh
Confidence 68999999999999999999875 78999998876542 6899999999999999998764
No 13
>PRK10307 putative glycosyl transferase; Provisional
Probab=100.00 E-value=2.7e-38 Score=361.84 Aligned_cols=399 Identities=15% Similarity=0.126 Sum_probs=286.4
Q ss_pred eEEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCC--CCCCccccccccccchh
Q 002665 7 NMKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVD--WTYAEPSEMLNRKNTEN 84 (895)
Q Consensus 7 ~~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~--~~~~~~~e~~~~~~~~~ 84 (895)
|||++++.++. |+.||.+.++.+|+++|.++| |+|+|+|+....|... ..+.... .
T Consensus 1 mkIlii~~~~~-----------P~~~g~~~~~~~l~~~L~~~G--~~V~vit~~~~~~~~~~~~~~~~~~--~------- 58 (412)
T PRK10307 1 MKILVYGINYA-----------PELTGIGKYTGEMAEWLAARG--HEVRVITAPPYYPQWRVGEGYSAWR--Y------- 58 (412)
T ss_pred CeEEEEecCCC-----------CCccchhhhHHHHHHHHHHCC--CeEEEEecCCCCCCCCCCccccccc--c-------
Confidence 89999998876 889999999999999999999 9999999863323211 1111100 0
Q ss_pred hhcccCCCCCcEEEEecCCCCCccccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCC--chHHH
Q 002665 85 LMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYAD--AGDAA 162 (895)
Q Consensus 85 ~~~~~~~~~g~~i~r~~~~~~~~~l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~--~~~~~ 162 (895)
..+..+|++++|++....... . .+.+.. ....+.......+...+ . .+||+||+|.+. ....+
T Consensus 59 ---~~~~~~~i~v~r~~~~~~~~~----~---~~~~~~-~~~~~~~~~~~~~~~~~---~-~~~Div~~~~p~~~~~~~~ 123 (412)
T PRK10307 59 ---RRESEGGVTVWRCPLYVPKQP----S---GLKRLL-HLGSFALSSFFPLLAQR---R-WRPDRVIGVVPTLFCAPGA 123 (412)
T ss_pred ---eeeecCCeEEEEccccCCCCc----c---HHHHHH-HHHHHHHHHHHHHhhcc---C-CCCCEEEEeCCcHHHHHHH
Confidence 011236899999986432110 0 000110 01111111111111111 0 369999999753 34566
Q ss_pred HHHhccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCCh
Q 002665 163 ALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDP 242 (895)
Q Consensus 163 ~~~~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~ 242 (895)
.++++..++|+|++.|+++++.. ...|.+.... ..++... .|+..++.||.|++.|+...+.+.. +. ..+
T Consensus 124 ~~~~~~~~~~~v~~~~d~~~~~~---~~~~~~~~~~---~~~~~~~--~~~~~~~~ad~ii~~S~~~~~~~~~-~~-~~~ 193 (412)
T PRK10307 124 RLLARLSGARTWLHIQDYEVDAA---FGLGLLKGGK---VARLATA--FERSLLRRFDNVSTISRSMMNKARE-KG-VAA 193 (412)
T ss_pred HHHHHhhCCCEEEEeccCCHHHH---HHhCCccCcH---HHHHHHH--HHHHHHhhCCEEEecCHHHHHHHHH-cC-CCc
Confidence 77888899999999999876542 2223221111 1122222 3777899999999999988776543 22 122
Q ss_pred HHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEE
Q 002665 243 VLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILAL 322 (895)
Q Consensus 243 ~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~v 322 (895)
. ++.+||||+|.+.|.+.... .......++...+++++|+|+
T Consensus 194 ~---------------------~i~vi~ngvd~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~i~~~ 235 (412)
T PRK10307 194 E---------------------KVIFFPNWSEVARFQPVADA-----------------DVDALRAQLGLPDGKKIVLYS 235 (412)
T ss_pred c---------------------cEEEECCCcCHhhcCCCCcc-----------------chHHHHHHcCCCCCCEEEEEc
Confidence 2 89999999999888653211 011123344455667899999
Q ss_pred eCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHH
Q 002665 323 ARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDI 401 (895)
Q Consensus 323 grl~~~Kgi~~ll~A~~~l~~~~~~~~l~-livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~l 401 (895)
||+.+.||++.+++|+..+.+ .+++. +++|+++.. ..+.++++++++. +|.|.|+++.+++..+
T Consensus 236 G~l~~~kg~~~li~a~~~l~~---~~~~~l~ivG~g~~~-----------~~l~~~~~~~~l~-~v~f~G~~~~~~~~~~ 300 (412)
T PRK10307 236 GNIGEKQGLELVIDAARRLRD---RPDLIFVICGQGGGK-----------ARLEKMAQCRGLP-NVHFLPLQPYDRLPAL 300 (412)
T ss_pred CccccccCHHHHHHHHHHhcc---CCCeEEEEECCChhH-----------HHHHHHHHHcCCC-ceEEeCCCCHHHHHHH
Confidence 999999999999999998742 24444 478887643 3455677888886 6999999999999999
Q ss_pred HHHhhcCCcEEEecCCCCC----CChHHHHHHHcCCCEEEcCCCC--cccccccCCceEEeCCCCHHHHHHHHHHHhhCH
Q 002665 402 YRLAAKTKGVFINPAFIEP----FGLTLIEAAAYGLPIVATKNGG--PVDIHRVLDNGLLVDPHDQQSIADALLKLVSDK 475 (895)
Q Consensus 402 y~~a~~~~Dv~v~ps~~eg----~gl~~~Ea~a~G~PVvat~~gg--~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~ 475 (895)
|+.| |++++|+..|+ +|.+++||||||+|||+|+.|| ..+++. .+|++++|+|+++++++|.++++++
T Consensus 301 ~~~a----Di~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l~~~~ 374 (412)
T PRK10307 301 LKMA----DCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAALARQA 374 (412)
T ss_pred HHhc----CEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHHHhCH
Confidence 9999 99999999888 5677899999999999999876 457776 5899999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-hhCCHHHHHHHHHHHHHHhhhc
Q 002665 476 QLWERCRQNGLKNI-HQFSWPEHCKSYLSRISSCKQR 511 (895)
Q Consensus 476 ~~~~~~~~~~~~~v-~~~s~~~~a~~~~~~l~~~~~~ 511 (895)
++++++++++++.+ ++|||+.++++|++.|++++.+
T Consensus 375 ~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~ 411 (412)
T PRK10307 375 LLRPKLGTVAREYAERTLDKENVLRQFIADIRGLVAE 411 (412)
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcC
Confidence 99999999999999 5899999999999999988753
No 14
>PLN02316 synthase/transferase
Probab=100.00 E-value=4.6e-38 Score=375.67 Aligned_cols=423 Identities=16% Similarity=0.119 Sum_probs=282.7
Q ss_pred cceEEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccc-cccccccch
Q 002665 5 DFNMKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPS-EMLNRKNTE 83 (895)
Q Consensus 5 ~~~~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~-e~~~~~~~~ 83 (895)
++|+|+|||.|.. |+ ..+||...++..|+++|++.| |+|.|+++.+............. ..+......
T Consensus 586 ~pM~Il~VSsE~~----P~-----aKvGGLgDVV~sLp~ALa~~G--h~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~~~ 654 (1036)
T PLN02316 586 PPMHIVHIAVEMA----PI-----AKVGGLGDVVTSLSRAVQDLN--HNVDIILPKYDCLNLSHVKDLHYQRSYSWGGTE 654 (1036)
T ss_pred CCcEEEEEEcccC----CC-----CCcCcHHHHHHHHHHHHHHcC--CEEEEEecCCcccchhhcccceEEEEeccCCEE
Confidence 6899999999986 22 469999999999999999999 99999999754311110000000 000000000
Q ss_pred hhhcccCCCCCcEEEEecCCCCCccccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHH
Q 002665 84 NLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAA 163 (895)
Q Consensus 84 ~~~~~~~~~~g~~i~r~~~~~~~~~l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~ 163 (895)
... .....+|+.++++.... .+.....+..+.+.+ .++..+-+.....+.. ..++|||||+|+|.++.++.
T Consensus 655 ~~v-~~~~~~GV~vyfl~~~~--~~F~r~~~Yg~~Dd~-~RF~~F~~Aale~l~~-----~~~~PDIIHaHDW~talva~ 725 (1036)
T PLN02316 655 IKV-WFGKVEGLSVYFLEPQN--GMFWAGCVYGCRNDG-ERFGFFCHAALEFLLQ-----SGFHPDIIHCHDWSSAPVAW 725 (1036)
T ss_pred EEE-EEEEECCcEEEEEeccc--cccCCCCCCCchhHH-HHHHHHHHHHHHHHHh-----cCCCCCEEEECCChHHHHHH
Confidence 000 00122477777776432 121122122221211 1111111122222211 12579999999999998888
Q ss_pred HHhcc------CCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHh
Q 002665 164 LLSGA------LNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLY 237 (895)
Q Consensus 164 ~~~~~------~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y 237 (895)
+++.. .++|+|+|+|++.... +.. ...+..||.|+++|+...+++...+
T Consensus 726 llk~~~~~~~~~~~p~V~TiHnl~~~~-------------------n~l------k~~l~~AD~ViTVS~tya~EI~~~~ 780 (1036)
T PLN02316 726 LFKDHYAHYGLSKARVVFTIHNLEFGA-------------------NHI------GKAMAYADKATTVSPTYSREVSGNS 780 (1036)
T ss_pred HHHHhhhhhccCCCCEEEEeCCcccch-------------------hHH------HHHHHHCCEEEeCCHHHHHHHHhcc
Confidence 77663 4589999999873210 011 1246799999999999887765432
Q ss_pred cCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCC--CCCchhhhhhhccCC-C
Q 002665 238 DGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPAS--PDPPIWSEIMHFFSN-P 314 (895)
Q Consensus 238 ~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~ 314 (895)
.. .+ ...++.+||||||++.|.|........ .+...... .........++++++ +
T Consensus 781 ~l-~~-------------------~~~Kl~vI~NGID~~~w~P~tD~~lp~--~y~~~~~~~gK~~~k~~Lr~~lGL~~~ 838 (1036)
T PLN02316 781 AI-AP-------------------HLYKFHGILNGIDPDIWDPYNDNFIPV--PYTSENVVEGKRAAKEALQQRLGLKQA 838 (1036)
T ss_pred Cc-cc-------------------ccCCEEEEECCccccccCCcccccccc--cCCchhhhhhhhhhHHHHHHHhCCCcc
Confidence 11 10 012899999999999988754221100 00000000 000111234455655 3
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCC--CCCEEeCCC
Q 002665 315 RKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDL--YGQVAYPKH 392 (895)
Q Consensus 315 ~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l--~~~v~~~g~ 392 (895)
+.|+|+++|||.+.||++.+++|+..+.+ ...++ +|+|++++. .+...+..++.++++ .++|.|.+.
T Consensus 839 d~plVg~VGRL~~qKGvdlLi~Al~~ll~--~~~ql-VIvG~Gpd~--------~~e~~l~~La~~Lg~~~~~rV~f~g~ 907 (1036)
T PLN02316 839 DLPLVGIITRLTHQKGIHLIKHAIWRTLE--RNGQV-VLLGSAPDP--------RIQNDFVNLANQLHSSHHDRARLCLT 907 (1036)
T ss_pred cCeEEEEEeccccccCHHHHHHHHHHHhh--cCcEE-EEEeCCCCH--------HHHHHHHHHHHHhCccCCCeEEEEec
Confidence 67999999999999999999999998853 33444 578888642 234567777887765 568888877
Q ss_pred CCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccC-------------CceEEeCCC
Q 002665 393 HKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVL-------------DNGLLVDPH 459 (895)
Q Consensus 393 ~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~-------------~~g~lv~p~ 459 (895)
.+......+|+.| |+||+||++||||++++|||+||+|+|++++||.+|+|.++ .+|++|++.
T Consensus 908 ~de~lah~iyaaA----DiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~ 983 (1036)
T PLN02316 908 YDEPLSHLIYAGA----DFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGA 983 (1036)
T ss_pred CCHHHHHHHHHhC----cEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCCC
Confidence 5332234799999 99999999999999999999999999999999999999874 589999999
Q ss_pred CHHHHHHHHHHHhhC-HHHHHHHHHHHHHHH-hhCCHHHHHHHHHHHHHHhh
Q 002665 460 DQQSIADALLKLVSD-KQLWERCRQNGLKNI-HQFSWPEHCKSYLSRISSCK 509 (895)
Q Consensus 460 d~~~la~ai~~ll~~-~~~~~~~~~~~~~~v-~~~s~~~~a~~~~~~l~~~~ 509 (895)
|+++++.+|.+++.+ ++....+.+.+++.+ +.|||+..+++|+++|+++.
T Consensus 984 d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 984 DAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSAR 1035 (1036)
T ss_pred CHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 999999999999985 455666788888887 58999999999999998764
No 15
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=100.00 E-value=1e-37 Score=355.13 Aligned_cols=367 Identities=21% Similarity=0.222 Sum_probs=270.2
Q ss_pred EEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhhc
Q 002665 8 MKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 87 (895)
Q Consensus 8 ~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 87 (895)
||++++.... |..||.++++.+|+++|+++| |+|+|+|+....+ .+ .+.
T Consensus 1 kI~~v~~~~~-----------p~~GG~e~~~~~la~~L~~~G--~~V~v~~~~~~~~-----~~--~~~----------- 49 (398)
T cd03796 1 RICMVSDFFY-----------PNLGGVETHIYQLSQCLIKRG--HKVVVITHAYGNR-----VG--IRY----------- 49 (398)
T ss_pred CeeEEeeccc-----------cccccHHHHHHHHHHHHHHcC--CeeEEEeccCCcC-----CC--ccc-----------
Confidence 6888886564 889999999999999999999 9999999752111 00 000
Q ss_pred ccCCCCCcEEEEecCCCCCccccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCch--HHHHHH
Q 002665 88 GLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAG--DAAALL 165 (895)
Q Consensus 88 ~~~~~~g~~i~r~~~~~~~~~l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~--~~~~~~ 165 (895)
..++++++++|..+.. +.........+ +..+.+ .+.+ .+|||||+|.+... ..+.++
T Consensus 50 ---~~~~i~v~~~p~~~~~----~~~~~~~~~~~----~~~l~~---~~~~-------~~~DiIh~~~~~~~~~~~~~~~ 108 (398)
T cd03796 50 ---LTNGLKVYYLPFVVFY----NQSTLPTFFGT----FPLLRN---ILIR-------ERITIVHGHQAFSALAHEALLH 108 (398)
T ss_pred ---ccCceeEEEecceecc----CCccccchhhh----HHHHHH---HHHh-------cCCCEEEECCCCchHHHHHHHH
Confidence 1247888888864321 11111111111 112221 2222 57999999986433 346677
Q ss_pred hccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHH
Q 002665 166 SGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 245 (895)
Q Consensus 166 ~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~ 245 (895)
++..++|+|+|.|+.+.... . .. ....+ .++..++.+|.++++|+...+.+...+. ..+.
T Consensus 109 ~~~~~~~~v~t~h~~~~~~~--~------~~-------~~~~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~~-~~~~-- 168 (398)
T cd03796 109 ARTMGLKTVFTDHSLFGFAD--A------SS-------IHTNK--LLRFSLADVDHVICVSHTSKENTVLRAS-LDPE-- 168 (398)
T ss_pred hhhcCCcEEEEecccccccc--h------hh-------HHhhH--HHHHhhccCCEEEEecHhHhhHHHHHhC-CChh--
Confidence 88889999999998643110 0 00 00111 1345688999999999976654332222 2222
Q ss_pred HHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCC
Q 002665 246 RKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARP 325 (895)
Q Consensus 246 ~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl 325 (895)
++.+||||+|.+.|.+.... ..+++++|+++||+
T Consensus 169 -------------------k~~vi~ngvd~~~f~~~~~~---------------------------~~~~~~~i~~~grl 202 (398)
T cd03796 169 -------------------RVSVIPNAVDSSDFTPDPSK---------------------------RDNDKITIVVISRL 202 (398)
T ss_pred -------------------hEEEEcCccCHHHcCCCccc---------------------------CCCCceEEEEEecc
Confidence 89999999999888653210 13567899999999
Q ss_pred CCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHH
Q 002665 326 DPKKNITTLVKAFGECRPLRELANLT-LIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRL 404 (895)
Q Consensus 326 ~~~Kgi~~ll~A~~~l~~~~~~~~l~-livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~ 404 (895)
.+.||++.+++|+..+.+..+ ++. +++|+++.. ..+.++++++++.++|.|.|+++.+++..+|+.
T Consensus 203 ~~~Kg~~~li~a~~~l~~~~~--~~~l~i~G~g~~~-----------~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ 269 (398)
T cd03796 203 VYRKGIDLLVGIIPEICKKHP--NVRFIIGGDGPKR-----------ILLEEMREKYNLQDRVELLGAVPHERVRDVLVQ 269 (398)
T ss_pred chhcCHHHHHHHHHHHHhhCC--CEEEEEEeCCchH-----------HHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHh
Confidence 999999999999998864344 455 477877632 445577888999999999999999999999999
Q ss_pred hhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHhhCHHHHHHHHHH
Q 002665 405 AAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQN 484 (895)
Q Consensus 405 a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~ 484 (895)
| |++++||..|+||++++||||||+|||+++.||..|++.++ .++++ +.|+++++++|.++++++.+...+.++
T Consensus 270 a----d~~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~~-~~~~~-~~~~~~l~~~l~~~l~~~~~~~~~~~~ 343 (398)
T cd03796 270 G----HIFLNTSLTEAFCIAIVEAASCGLLVVSTRVGGIPEVLPPD-MILLA-EPDVESIVRKLEEAISILRTGKHDPWS 343 (398)
T ss_pred C----CEEEeCChhhccCHHHHHHHHcCCCEEECCCCCchhheeCC-ceeec-CCCHHHHHHHHHHHHhChhhhhhHHHH
Confidence 9 99999999999999999999999999999999999999764 35555 449999999999999987766677888
Q ss_pred HHHHH-hhCCHHHHHHHHHHHHHHhhhc
Q 002665 485 GLKNI-HQFSWPEHCKSYLSRISSCKQR 511 (895)
Q Consensus 485 ~~~~v-~~~s~~~~a~~~~~~l~~~~~~ 511 (895)
+++.+ ++|||+..+++|+++|++++..
T Consensus 344 ~~~~~~~~fs~~~~~~~~~~~y~~l~~~ 371 (398)
T cd03796 344 FHNRVKKMYSWEDVAKRTEKVYDRILQT 371 (398)
T ss_pred HHHHHHhhCCHHHHHHHHHHHHHHHhcC
Confidence 88888 6999999999999999998753
No 16
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=100.00 E-value=1.4e-37 Score=361.64 Aligned_cols=447 Identities=19% Similarity=0.195 Sum_probs=287.0
Q ss_pred eEEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCC-ccccccc-cccchh
Q 002665 7 NMKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYA-EPSEMLN-RKNTEN 84 (895)
Q Consensus 7 ~~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~-~~~e~~~-~~~~~~ 84 (895)
|||+|||.+.. | ...+||...++..|+++|+++| |+|.|+++.+..-....... ....... ......
T Consensus 1 m~i~~vs~E~~----P-----~~k~GGl~~~v~~L~~aL~~~G--~~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (473)
T TIGR02095 1 MRVLFVAAEMA----P-----FAKTGGLADVVGALPKALAALG--HDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRT 69 (473)
T ss_pred CeEEEEEeccc----c-----ccCcCcHHHHHHHHHHHHHHcC--CeEEEEecCCcChhhhhccCeEEEEEEEEeecCce
Confidence 89999998865 1 1459999999999999999999 99999998754211100000 0000000 000000
Q ss_pred hh--cccCCCCCcEEEEecCCCCCccccc-cccCC--CchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCch
Q 002665 85 LM--QGLGESSGAYIIRIPFGPKDKYVQK-ELLWP--HIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAG 159 (895)
Q Consensus 85 ~~--~~~~~~~g~~i~r~~~~~~~~~l~k-~~~~~--~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~ 159 (895)
-. -.....+|++++++.... +..+ ..+.. +.+.+ .++..+.....+.++. ...+|||||+|.|.++
T Consensus 70 ~~~~~~~~~~~~v~~~~i~~~~---~~~r~~~~y~~~~~d~~-~r~~~f~~a~~~~~~~-----~~~~~DiiH~hdw~~~ 140 (473)
T TIGR02095 70 LYVKVFEGVVEGVPVYFIDNPS---LFDRPGGIYGDDYPDNA-ERFAFFSRAAAELLSG-----LGWQPDVVHAHDWHTA 140 (473)
T ss_pred eEEEEEEEEECCceEEEEECHH---HcCCCCCCCCCCCCCHH-HHHHHHHHHHHHHHHh-----cCCCCCEEEECCcHHH
Confidence 00 000223578888887542 1111 11111 22221 1111122222222221 1257999999999999
Q ss_pred HHHHHHhccCC---CCEEEEeCCCchhhH--HHHHHhCCCChhhhh-hHhhHHHhHHHHHhhccccCEEEecCHHHHHHH
Q 002665 160 DAAALLSGALN---VPMVFTGHSLGRDKL--EQLLKQGRLSRDEIN-TTYKIMRRIEAEELSLDASEIVITSTRQEIEEQ 233 (895)
Q Consensus 160 ~~~~~~~~~~~---ip~v~t~H~~~~~~~--~~~~~~g~~~~~~~~-~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~ 233 (895)
.++..++...+ +|+|+|+|++..... ........+....+. .......++..++..+..||.|+++|+...+++
T Consensus 141 ~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei 220 (473)
T TIGR02095 141 LVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYAREI 220 (473)
T ss_pred HHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecCHhHHHHh
Confidence 99988887766 999999999853211 111111011100000 011111234456778999999999999887776
Q ss_pred HHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCC-CCCchhhhhhhccC
Q 002665 234 WRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPAS-PDPPIWSEIMHFFS 312 (895)
Q Consensus 234 ~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 312 (895)
.....+. .+...|..+ ..++.+||||||++.|.|.....-. ..+...... .........++++.
T Consensus 221 ~~~~~~~--~l~~~l~~~-----------~~ki~~I~NGid~~~~~p~~~~~~~--~~~~~~~~~~k~~~k~~l~~~~gl 285 (473)
T TIGR02095 221 LTPEFGY--GLDGVLKAR-----------SGKLRGILNGIDTEVWNPATDPYLK--ANYSADDLAGKAENKEALQEELGL 285 (473)
T ss_pred cCCcCCc--cchhHHHhc-----------CCCeEEEeCCCCccccCCCCCcccc--cCcCccchhhhhhhHHHHHHHcCC
Confidence 4421111 011111111 1289999999999999875322100 000000000 00011123344555
Q ss_pred CC--CCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeC
Q 002665 313 NP--RKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYP 390 (895)
Q Consensus 313 ~~--~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~ 390 (895)
+. +.++|+++||+.+.||++.+++|+.++.+ ...++ +++|+++. ++...+..+..+++ .++.+.
T Consensus 286 ~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~~l-vi~G~g~~---------~~~~~l~~~~~~~~--~~v~~~ 351 (473)
T TIGR02095 286 PVDDDVPLFGVISRLTQQKGVDLLLAALPELLE--LGGQL-VVLGTGDP---------ELEEALRELAERYP--GNVRVI 351 (473)
T ss_pred CccCCCCEEEEEecCccccChHHHHHHHHHHHH--cCcEE-EEECCCCH---------HHHHHHHHHHHHCC--CcEEEE
Confidence 44 78999999999999999999999999853 22333 47787741 12344555555543 568888
Q ss_pred CCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccC------CceEEeCCCCHHHH
Q 002665 391 KHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVL------DNGLLVDPHDQQSI 464 (895)
Q Consensus 391 g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~------~~g~lv~p~d~~~l 464 (895)
+.++.+++..+|+.| |++|+||..||||++++|||+||+|+|+++.||..|++.++ .+|++++|.|++++
T Consensus 352 ~~~~~~~~~~~~~~a----Dv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~l 427 (473)
T TIGR02095 352 IGYDEALAHLIYAGA----DFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGAL 427 (473)
T ss_pred EcCCHHHHHHHHHhC----CEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHH
Confidence 877778889999999 99999999999999999999999999999999999999987 89999999999999
Q ss_pred HHHHHHHhh----CHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHh
Q 002665 465 ADALLKLVS----DKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSC 508 (895)
Q Consensus 465 a~ai~~ll~----~~~~~~~~~~~~~~~v~~~s~~~~a~~~~~~l~~~ 508 (895)
+++|.+++. +++.++++++++++ +.|||+.++++|+++|+++
T Consensus 428 a~~i~~~l~~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~~Y~~l 473 (473)
T TIGR02095 428 LAALSRALRLYRQDPSLWEALQKNAMS--QDFSWDKSAKQYVELYRSL 473 (473)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHhc--cCCCcHHHHHHHHHHHHhC
Confidence 999999988 88888888887753 5899999999999999864
No 17
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=100.00 E-value=5.2e-37 Score=355.73 Aligned_cols=377 Identities=19% Similarity=0.217 Sum_probs=271.6
Q ss_pred cceEEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchh
Q 002665 5 DFNMKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTEN 84 (895)
Q Consensus 5 ~~~~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~ 84 (895)
.+|||+++. |.. -++..||++.++.+|+++|.++| |+|+|+|.....+. .
T Consensus 57 ~~mrI~~~~-~~~---------~~~~~gG~~~~~~~l~~~L~~~G--~eV~vlt~~~~~~~----------~-------- 106 (465)
T PLN02871 57 RPRRIALFV-EPS---------PFSYVSGYKNRFQNFIRYLREMG--DEVLVVTTDEGVPQ----------E-------- 106 (465)
T ss_pred CCceEEEEE-CCc---------CCcccccHHHHHHHHHHHHHHCC--CeEEEEecCCCCCc----------c--------
Confidence 589999996 432 13578999999999999999999 99999998522110 0
Q ss_pred hhcccCCCCCcEEEEecCCCCCccccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCC-chHHHH
Q 002665 85 LMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYAD-AGDAAA 163 (895)
Q Consensus 85 ~~~~~~~~~g~~i~r~~~~~~~~~l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~-~~~~~~ 163 (895)
..+++++++...+. ..... .+....+...+.+. +++ .+|||||+|... ..+.+.
T Consensus 107 -------~~g~~v~~~~~~~~-~~~~~---~~~~~~~~~~l~~~-------i~~-------~kpDiIh~~~~~~~~~~~~ 161 (465)
T PLN02871 107 -------FHGAKVIGSWSFPC-PFYQK---VPLSLALSPRIISE-------VAR-------FKPDLIHASSPGIMVFGAL 161 (465)
T ss_pred -------ccCceeeccCCcCC-ccCCC---ceeeccCCHHHHHH-------HHh-------CCCCEEEECCCchhHHHHH
Confidence 12555554433221 01111 00000111122222 222 579999999863 344566
Q ss_pred HHhccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChH
Q 002665 164 LLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPV 243 (895)
Q Consensus 164 ~~~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~ 243 (895)
.+++..++|+|++.|+........+ . .....+... ..++..++.+|.|+++|+...+.+...+.. .+
T Consensus 162 ~~ak~~~ip~V~~~h~~~~~~~~~~------~---~~~~~~~~~--~~~r~~~~~ad~ii~~S~~~~~~l~~~~~~-~~- 228 (465)
T PLN02871 162 FYAKLLCVPLVMSYHTHVPVYIPRY------T---FSWLVKPMW--DIIRFLHRAADLTLVTSPALGKELEAAGVT-AA- 228 (465)
T ss_pred HHHHHhCCCEEEEEecCchhhhhcc------c---chhhHHHHH--HHHHHHHhhCCEEEECCHHHHHHHHHcCCC-Cc-
Confidence 6778889999999998754432111 0 001111111 124556889999999999877766543311 11
Q ss_pred HHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhc-cCCCCCcEEEEE
Q 002665 244 LERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHF-FSNPRKPMILAL 322 (895)
Q Consensus 244 ~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Il~v 322 (895)
.++.+||||+|.+.|.+..... ....++ ...+++++|+++
T Consensus 229 --------------------~kv~vi~nGvd~~~f~p~~~~~-------------------~~~~~~~~~~~~~~~i~~v 269 (465)
T PLN02871 229 --------------------NRIRVWNKGVDSESFHPRFRSE-------------------EMRARLSGGEPEKPLIVYV 269 (465)
T ss_pred --------------------CeEEEeCCccCccccCCccccH-------------------HHHHHhcCCCCCCeEEEEe
Confidence 2899999999999886532110 011111 123467899999
Q ss_pred eCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHH
Q 002665 323 ARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIY 402 (895)
Q Consensus 323 grl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly 402 (895)
||+.+.||++.++++++++. +..+ +++|+++..+ .+.+++.. .+|.|.|+++.+++..+|
T Consensus 270 Grl~~~K~~~~li~a~~~~~----~~~l-~ivG~G~~~~-----------~l~~~~~~----~~V~f~G~v~~~ev~~~~ 329 (465)
T PLN02871 270 GRLGAEKNLDFLKRVMERLP----GARL-AFVGDGPYRE-----------ELEKMFAG----TPTVFTGMLQGDELSQAY 329 (465)
T ss_pred CCCchhhhHHHHHHHHHhCC----CcEE-EEEeCChHHH-----------HHHHHhcc----CCeEEeccCCHHHHHHHH
Confidence 99999999999999998762 2333 4788876432 23334332 369999999999999999
Q ss_pred HHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccc---CCceEEeCCCCHHHHHHHHHHHhhCHHHHH
Q 002665 403 RLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRV---LDNGLLVDPHDQQSIADALLKLVSDKQLWE 479 (895)
Q Consensus 403 ~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~---~~~g~lv~p~d~~~la~ai~~ll~~~~~~~ 479 (895)
+.| |++|+||..|+||++++||||||+|||+++.||..|++.+ +.+|++++|+|+++++++|.+++++++.++
T Consensus 330 ~~a----Dv~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~ 405 (465)
T PLN02871 330 ASG----DVFVMPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLADPELRE 405 (465)
T ss_pred HHC----CEEEECCcccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhCHHHHH
Confidence 999 9999999999999999999999999999999999999998 899999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCHHHHHHHHHH-HHHHhhhcC
Q 002665 480 RCRQNGLKNIHQFSWPEHCKSYLS-RISSCKQRQ 512 (895)
Q Consensus 480 ~~~~~~~~~v~~~s~~~~a~~~~~-~l~~~~~~~ 512 (895)
++++++++.+++|||+.+++++++ .|+++....
T Consensus 406 ~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~~ 439 (465)
T PLN02871 406 RMGAAAREEVEKWDWRAATRKLRNEQYSAAIWFW 439 (465)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998 698888764
No 18
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=100.00 E-value=5.8e-37 Score=348.10 Aligned_cols=377 Identities=21% Similarity=0.288 Sum_probs=274.8
Q ss_pred eEEEEEecccccccCccCCCCCCC-CCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhh
Q 002665 7 NMKYLCSLHGLIRGENMELGRDSD-TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENL 85 (895)
Q Consensus 7 ~~i~~i~~~~~~~~~~~~~g~~~~-~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~ 85 (895)
|||++|+.... |+ .||.++++.+|+++|+++ ++|+|+|.... . .
T Consensus 1 mkI~~i~~~~~-----------p~~~GG~~~~v~~l~~~l~~~---~~v~v~~~~~~--~---------~---------- 45 (388)
T TIGR02149 1 MKVTVLTREYP-----------PNVYGGAGVHVEELTRELARL---MDVDVRCFGDQ--R---------F---------- 45 (388)
T ss_pred CeeEEEecccC-----------ccccccHhHHHHHHHHHHHHh---cCeeEEcCCCc--h---------h----------
Confidence 89999987653 66 599999999999999986 56777775311 0 0
Q ss_pred hcccCCCCCcEEEEecCCCCCccccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHH
Q 002665 86 MQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALL 165 (895)
Q Consensus 86 ~~~~~~~~g~~i~r~~~~~~~~~l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~ 165 (895)
..+++++++++.... + ......+..+ ...+. .... ..+||+||+|.+.++..+..+
T Consensus 46 -----~~~~~~~~~~~~~~~---~--~~~~~~~~~~-------~~~~~-~~~~------~~~~divh~~~~~~~~~~~~~ 101 (388)
T TIGR02149 46 -----DSEGLTVKGYRPWSE---L--KEANKALGTF-------SVDLA-MAND------PVDADVVHSHTWYTFLAGHLA 101 (388)
T ss_pred -----cCCCeEEEEecChhh---c--cchhhhhhhh-------hHHHH-HhhC------CCCCCeEeecchhhhhHHHHH
Confidence 114777877764221 0 0000111111 00110 1111 135999999998777777777
Q ss_pred hccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHH
Q 002665 166 SGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 245 (895)
Q Consensus 166 ~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~ 245 (895)
++..++|+|++.|++.+... + ........+.+..+ .+...++.+|.|+++|+...+.+...|+...+.
T Consensus 102 ~~~~~~p~v~~~h~~~~~~~--~------~~~~~~~~~~~~~~--~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~-- 169 (388)
T TIGR02149 102 KKLYDKPLVVTAHSLEPLRP--W------KEEQLGGGYKLSSW--AEKTAIEAADRVIAVSGGMREDILKYYPDLDPE-- 169 (388)
T ss_pred HHhcCCCEEEEeeccccccc--c------cccccccchhHHHH--HHHHHHhhCCEEEEccHHHHHHHHHHcCCCCcc--
Confidence 77789999999999854321 0 00000011222233 367789999999999998877776666443332
Q ss_pred HHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCC
Q 002665 246 RKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARP 325 (895)
Q Consensus 246 ~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl 325 (895)
++.+||||+|...|.+.. ......++..++++++|+++||+
T Consensus 170 -------------------~i~vi~ng~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~i~~~Grl 210 (388)
T TIGR02149 170 -------------------KVHVIYNGIDTKEYKPDD--------------------GNVVLDRYGIDRSRPYILFVGRI 210 (388)
T ss_pred -------------------eEEEecCCCChhhcCCCc--------------------hHHHHHHhCCCCCceEEEEEccc
Confidence 899999999998775421 11223344455678899999999
Q ss_pred CCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCC-CCEEe-CCCCCCCcHHHHHH
Q 002665 326 DPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLY-GQVAY-PKHHKQSDVPDIYR 403 (895)
Q Consensus 326 ~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~-~~v~~-~g~~~~~el~~ly~ 403 (895)
.+.||++.+++|+.++. +..++ +++|++++... +...+.+.+..++.. +++.+ .+.++.+++..+|+
T Consensus 211 ~~~Kg~~~li~a~~~l~---~~~~l-~i~g~g~~~~~-------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 279 (388)
T TIGR02149 211 TRQKGVPHLLDAVHYIP---KDVQV-VLCAGAPDTPE-------VAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLS 279 (388)
T ss_pred ccccCHHHHHHHHHHHh---hcCcE-EEEeCCCCcHH-------HHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHH
Confidence 99999999999999873 33444 34555543322 234555666666552 34554 57889999999999
Q ss_pred HhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCH------HHHHHHHHHHhhCHHH
Q 002665 404 LAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQ------QSIADALLKLVSDKQL 477 (895)
Q Consensus 404 ~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~------~~la~ai~~ll~~~~~ 477 (895)
.| |++|+||..|+||++++|||+||+|||+++.||..|++.++.+|+++++.|+ ++++++|.+++++++.
T Consensus 280 ~a----Dv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~ 355 (388)
T TIGR02149 280 NA----EVFVCPSIYEPLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLADPEL 355 (388)
T ss_pred hC----CEEEeCCccCCCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhCHHH
Confidence 99 9999999999999999999999999999999999999999899999999998 9999999999999999
Q ss_pred HHHHHHHHHHHH-hhCCHHHHHHHHHHHHHHh
Q 002665 478 WERCRQNGLKNI-HQFSWPEHCKSYLSRISSC 508 (895)
Q Consensus 478 ~~~~~~~~~~~v-~~~s~~~~a~~~~~~l~~~ 508 (895)
++++++++++.+ ++|||+.+++++.+.|+++
T Consensus 356 ~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~ 387 (388)
T TIGR02149 356 AKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKV 387 (388)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence 999999999998 6899999999999999876
No 19
>PRK14099 glycogen synthase; Provisional
Probab=100.00 E-value=4.2e-36 Score=346.28 Aligned_cols=450 Identities=20% Similarity=0.189 Sum_probs=281.3
Q ss_pred cceEEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCcccccccc-cc-c
Q 002665 5 DFNMKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNR-KN-T 82 (895)
Q Consensus 5 ~~~~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~-~~-~ 82 (895)
.+|||++++-.-. |. ..|||..-++-.|.++|+++| |+|.|+++.+..-............+.. .. .
T Consensus 2 ~~~~il~v~~E~~----p~-----~k~ggl~dv~~~lp~~l~~~g--~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~ 70 (485)
T PRK14099 2 TPLRVLSVASEIF----PL-----IKTGGLADVAGALPAALKAHG--VEVRTLVPGYPAVLAGIEDAEQVHSFPDLFGGP 70 (485)
T ss_pred CCcEEEEEEeccc----cc-----cCCCcHHHHHHHHHHHHHHCC--CcEEEEeCCCcchhhhhcCceEEEEEeeeCCce
Confidence 5799999998765 33 789999999999999999999 9999999875321000000000000100 00 0
Q ss_pred hhhhcccCCCCCcEEEEecCCCCCccccccc-cCCC--chhHHHHHHHHH---HHHHHHhhhhcCCCCCCCCcEEEeccC
Q 002665 83 ENLMQGLGESSGAYIIRIPFGPKDKYVQKEL-LWPH--IPEFVDAALTHI---IQISKVLGEQVGSGQPIWPVAIHGHYA 156 (895)
Q Consensus 83 ~~~~~~~~~~~g~~i~r~~~~~~~~~l~k~~-~~~~--l~~f~~~~~~~~---~~~~~~l~~~~~~~~~~~pDvIh~h~~ 156 (895)
-..++ ...+|+.++.+..+ .+..+.. +... ...+.+...++. +...+.+.. + ...++|||||+|.|
T Consensus 71 ~~~~~--~~~~~v~~~~~~~~---~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~-~--~~~~~pDIiH~Hdw 142 (485)
T PRK14099 71 ARLLA--ARAGGLDLFVLDAP---HLYDRPGNPYVGPDGKDWPDNAQRFAALARAAAAIGQG-L--VPGFVPDIVHAHDW 142 (485)
T ss_pred EEEEE--EEeCCceEEEEeCh---HhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhh-h--ccCCCCCEEEECCc
Confidence 00000 11135666655432 1222211 1100 001122222221 111111111 0 01267999999999
Q ss_pred CchHHHHHHhc--cCCCCEEEEeCCCchhhH--HHHHH-hCCCChhhhhh-HhhHHHhHHHHHhhccccCEEEecCHHHH
Q 002665 157 DAGDAAALLSG--ALNVPMVFTGHSLGRDKL--EQLLK-QGRLSRDEINT-TYKIMRRIEAEELSLDASEIVITSTRQEI 230 (895)
Q Consensus 157 ~~~~~~~~~~~--~~~ip~v~t~H~~~~~~~--~~~~~-~g~~~~~~~~~-~~~~~~r~~~e~~~~~~ad~vi~~s~~~~ 230 (895)
.++.++.++.. ..++|+|+|+|++..... ..... .|. ....+.. ...+...+...+..+..||.|+++|+..+
T Consensus 143 ~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~~a 221 (485)
T PRK14099 143 QAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGL-PPSAFSLDGVEYYGGIGYLKAGLQLADRITTVSPTYA 221 (485)
T ss_pred HHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCC-ChHHcCchhhhhCCCccHHHHHHHhcCeeeecChhHH
Confidence 99988876653 346899999999743311 11111 111 1111100 00111122235667899999999999888
Q ss_pred HHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCC-chhhhhhh
Q 002665 231 EEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDP-PIWSEIMH 309 (895)
Q Consensus 231 ~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 309 (895)
+++...+.+.. ++..|+.+. .++.+||||||++.|.|....... ..+......... ......++
T Consensus 222 ~ei~~~~~g~g--l~~~l~~~~-----------~ki~vI~NGID~~~f~p~~~~~~~--~~~~~~~~~~k~~~k~~l~~~ 286 (485)
T PRK14099 222 LEIQGPEAGMG--LDGLLRQRA-----------DRLSGILNGIDTAVWNPATDELIA--ATYDVETLAARAANKAALQAR 286 (485)
T ss_pred HHHhcccCCcC--hHHHHHhhC-----------CCeEEEecCCchhhccccccchhh--hcCChhHHHhHHHhHHHHHHH
Confidence 87654332211 111111111 289999999999999875422100 000000000000 01122344
Q ss_pred ccCC--CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCE
Q 002665 310 FFSN--PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQV 387 (895)
Q Consensus 310 ~~~~--~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v 387 (895)
++.+ ++.++|+++||+.++||++.+++|+..+.+ ...++ +++|+++. ++...+.+++.++. +++
T Consensus 287 ~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~--~~~~l-vivG~G~~---------~~~~~l~~l~~~~~--~~v 352 (485)
T PRK14099 287 FGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLG--EGAQL-ALLGSGDA---------ELEARFRAAAQAYP--GQI 352 (485)
T ss_pred cCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHh--cCcEE-EEEecCCH---------HHHHHHHHHHHHCC--CCE
Confidence 5544 357899999999999999999999998853 23333 57787652 12344555565554 344
Q ss_pred -EeCCCCCCCcHHHHHH-HhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccC---------CceEEe
Q 002665 388 -AYPKHHKQSDVPDIYR-LAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVL---------DNGLLV 456 (895)
Q Consensus 388 -~~~g~~~~~el~~ly~-~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~---------~~g~lv 456 (895)
.|.|+ .++++.+|. .| |+||+||.+||||++++|||+||+|+|++++||..|+|.++ .+|++|
T Consensus 353 ~~~~G~--~~~l~~~~~a~a----Difv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~ 426 (485)
T PRK14099 353 GVVIGY--DEALAHLIQAGA----DALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQF 426 (485)
T ss_pred EEEeCC--CHHHHHHHHhcC----CEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEe
Confidence 68887 688999875 58 99999999999999999999999988889999999998765 589999
Q ss_pred CCCCHHHHHHHHHH---HhhCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhhhc
Q 002665 457 DPHDQQSIADALLK---LVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQR 511 (895)
Q Consensus 457 ~p~d~~~la~ai~~---ll~~~~~~~~~~~~~~~~v~~~s~~~~a~~~~~~l~~~~~~ 511 (895)
+|.|+++++++|.+ ++++++.++++++++++ +.|||+..+++|+++|++++..
T Consensus 427 ~~~d~~~La~ai~~a~~l~~d~~~~~~l~~~~~~--~~fSw~~~a~~y~~lY~~l~~~ 482 (485)
T PRK14099 427 SPVTADALAAALRKTAALFADPVAWRRLQRNGMT--TDVSWRNPAQHYAALYRSLVAE 482 (485)
T ss_pred CCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHhhh--hcCChHHHHHHHHHHHHHHHhh
Confidence 99999999999997 56799999999998863 6899999999999999998754
No 20
>PRK14098 glycogen synthase; Provisional
Probab=100.00 E-value=4.7e-36 Score=346.23 Aligned_cols=447 Identities=15% Similarity=0.141 Sum_probs=284.2
Q ss_pred eEEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCC-CCC-Cc-cccccc-c-cc
Q 002665 7 NMKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVD-WTY-AE-PSEMLN-R-KN 81 (895)
Q Consensus 7 ~~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~-~~~-~~-~~e~~~-~-~~ 81 (895)
|||++++-.-. |+ ..|||..-.+..|.++|++.| |+|.|+++.+..-... ... .. ....+. + ..
T Consensus 6 ~~il~v~~E~~----p~-----~k~Ggl~dv~~~Lp~al~~~g--~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (489)
T PRK14098 6 FKVLYVSGEVS----PF-----VRVSALADFMASFPQALEEEG--FEARIMMPKYGTINDRKFRLHDVLRLSDIEVPLKE 74 (489)
T ss_pred cEEEEEeecch----hh-----cccchHHHHHHHHHHHHHHCC--CeEEEEcCCCCchhhhhhccccceEEEEEEEeecC
Confidence 99999998765 34 789999999999999999999 9999999875321100 000 00 000010 0 00
Q ss_pred chhhhcc-c--CCCCCcEEEEecCCCCCccccccccC-------CCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEE
Q 002665 82 TENLMQG-L--GESSGAYIIRIPFGPKDKYVQKELLW-------PHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAI 151 (895)
Q Consensus 82 ~~~~~~~-~--~~~~g~~i~r~~~~~~~~~l~k~~~~-------~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvI 151 (895)
....... . ....++.++.+..+ .+..+..+. +|.+.+. ++..+-+...+.+.. ..++||||
T Consensus 75 ~~~~~~~~~~~~~~~~v~~~~~~~~---~~f~r~~~y~~~~~g~~~~d~~~-rf~~f~~a~l~~~~~-----~~~~pDii 145 (489)
T PRK14098 75 KTDLLHVKVTALPSSKIQTYFLYNE---KYFKRNGLFTDMSLGGDLKGSAE-KVIFFNVGVLETLQR-----LGWKPDII 145 (489)
T ss_pred eeEEEEEEEecccCCCceEEEEeCH---HHcCCCCcCCCCccCCCCCcHHH-HHHHHHHHHHHHHHh-----cCCCCCEE
Confidence 0000000 0 01124555544322 222222211 1222221 111111112222221 12579999
Q ss_pred EeccCCchHHHHHHhccC-------CCCEEEEeCCCchhhHH--HHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEE
Q 002665 152 HGHYADAGDAAALLSGAL-------NVPMVFTGHSLGRDKLE--QLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIV 222 (895)
Q Consensus 152 h~h~~~~~~~~~~~~~~~-------~ip~v~t~H~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~v 222 (895)
|+|.|.++.++.++++.. ++|+|+|+|++..+... ..... .+..............+...+..+..||.|
T Consensus 146 H~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~-~~~~~~~~~~~~~~~~~n~lk~~i~~ad~V 224 (489)
T PRK14098 146 HCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQK-LLPEEVCSGLHREGDEVNMLYTGVEHADLL 224 (489)
T ss_pred EecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHH-hCCHHhhhhhhhcCCcccHHHHHHHhcCcc
Confidence 999999999988887543 79999999997532110 00000 000000000001111233456678999999
Q ss_pred EecCHHHHHHHHHH-hcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCC-
Q 002665 223 ITSTRQEIEEQWRL-YDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPD- 300 (895)
Q Consensus 223 i~~s~~~~~~~~~~-y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~- 300 (895)
+++|+...+++... ...+ .++..|+.+. .++.+||||||++.|.|..... ..+.+........
T Consensus 225 itVS~~~a~ei~~~~~~~~--gl~~~l~~~~-----------~kl~~I~NGID~~~~~p~~d~~--~~~~~~~~~~~~k~ 289 (489)
T PRK14098 225 TTTSPRYAEEIAGDGEEAF--GLDKVLEERK-----------MRLHGILNGIDTRQWNPSTDKL--IKKRYSIERLDGKL 289 (489)
T ss_pred eeeCHHHHHHhCcCCCCCc--ChHHHHHhcC-----------CCeeEEeCCccccccCCccccc--ccccCCcchhhhHH
Confidence 99999988876431 1111 1222332222 2899999999999998754221 0111110000000
Q ss_pred CchhhhhhhccCC--CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHH
Q 002665 301 PPIWSEIMHFFSN--PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLI 378 (895)
Q Consensus 301 ~~~~~~~~~~~~~--~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~ 378 (895)
......+++++.+ ++.++|+++||+.+.||++.+++|+.++.+ ...++ +|+|+++. .+...+.+++
T Consensus 290 ~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~--~~~~l-vivG~G~~---------~~~~~l~~l~ 357 (489)
T PRK14098 290 ENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVE--LDIQL-VICGSGDK---------EYEKRFQDFA 357 (489)
T ss_pred HHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHh--cCcEE-EEEeCCCH---------HHHHHHHHHH
Confidence 0011223344443 467899999999999999999999999853 22333 47787752 1335566666
Q ss_pred HHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccc----CCceE
Q 002665 379 DKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRV----LDNGL 454 (895)
Q Consensus 379 ~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~----~~~g~ 454 (895)
.+++ ++|.|.+.++.+++..+|+.| |++|+||..|+||++.+|||+||+|+|+++.||..|.+.+ +.+|+
T Consensus 358 ~~~~--~~V~~~g~~~~~~~~~~~a~a----Di~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~ 431 (489)
T PRK14098 358 EEHP--EQVSVQTEFTDAFFHLAIAGL----DMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGF 431 (489)
T ss_pred HHCC--CCEEEEEecCHHHHHHHHHhC----CEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCcee
Confidence 6663 689999999888899999999 9999999999999999999999999999999999998864 57899
Q ss_pred EeCCCCHHHHHHHHHHHh---hCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhh
Q 002665 455 LVDPHDQQSIADALLKLV---SDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCK 509 (895)
Q Consensus 455 lv~p~d~~~la~ai~~ll---~~~~~~~~~~~~~~~~v~~~s~~~~a~~~~~~l~~~~ 509 (895)
++++.|+++++++|.+++ ++++.++++++++. .+.|||+..+++|+++|++++
T Consensus 432 l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~y~~lY~~~~ 487 (489)
T PRK14098 432 IFHDYTPEALVAKLGEALALYHDEERWEELVLEAM--ERDFSWKNSAEEYAQLYRELL 487 (489)
T ss_pred EeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHh--cCCCChHHHHHHHHHHHHHHh
Confidence 999999999999999876 47887777776553 268999999999999999876
No 21
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=5.3e-35 Score=329.73 Aligned_cols=366 Identities=21% Similarity=0.296 Sum_probs=264.7
Q ss_pred eEEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhh
Q 002665 7 NMKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLM 86 (895)
Q Consensus 7 ~~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 86 (895)
|||++++ . |..||.++++.+++++|++.| |+|+|+|... +.. . .
T Consensus 1 mki~~~~---~-----------p~~gG~~~~~~~la~~L~~~G--~~v~v~~~~~--~~~-----~-~------------ 44 (371)
T cd04962 1 MKIGIVC---Y-----------PTYGGSGVVATELGKALARRG--HEVHFITSSR--PFR-----L-D------------ 44 (371)
T ss_pred CceeEEE---E-----------eCCCCccchHHHHHHHHHhcC--CceEEEecCC--Ccc-----h-h------------
Confidence 7999997 2 668999999999999999999 9999998742 110 0 0
Q ss_pred cccCCCCCcEEEEecCCCCCccccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHH-HHHH
Q 002665 87 QGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDA-AALL 165 (895)
Q Consensus 87 ~~~~~~~g~~i~r~~~~~~~~~l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~-~~~~ 165 (895)
...+++.++.++.... .......+. ......+.+.+.+ .+||+||+|++.+... +...
T Consensus 45 ---~~~~~~~~~~~~~~~~----~~~~~~~~~-------~~~~~~l~~~i~~-------~~~divh~~~~~~~~~~~~~~ 103 (371)
T cd04962 45 ---EYSPNIFFHEVEVPQY----PLFQYPPYD-------LALASKIAEVAKR-------YKLDLLHVHYAVPHAVAAYLA 103 (371)
T ss_pred ---hhccCeEEEEeccccc----chhhcchhH-------HHHHHHHHHHHhc-------CCccEEeecccCCccHHHHHH
Confidence 0012444443332111 000000110 1112222222322 5799999997643322 2222
Q ss_pred ---hccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCCh
Q 002665 166 ---SGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDP 242 (895)
Q Consensus 166 ---~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~ 242 (895)
.+..++|+|++.|+...... +. . .. .++ .++..++.+|.+++.|+...+.+...|.. +
T Consensus 104 ~~~~~~~~~~~i~~~h~~~~~~~------~~-~-----~~---~~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~~~--~ 164 (371)
T cd04962 104 REILGKKDLPVVTTLHGTDITLV------GQ-D-----PS---FQP--ATRFSIEKSDGVTAVSESLRQETYELFDI--T 164 (371)
T ss_pred HHhcCcCCCcEEEEEcCCccccc------cc-c-----cc---chH--HHHHHHhhCCEEEEcCHHHHHHHHHhcCC--c
Confidence 22248999999997632210 00 0 00 111 24456889999999999877766554421 1
Q ss_pred HHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEE
Q 002665 243 VLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILAL 322 (895)
Q Consensus 243 ~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~v 322 (895)
.++.+||||+|...|.+.... ....++...+++++++++
T Consensus 165 ---------------------~~i~vi~n~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~il~~ 203 (371)
T cd04962 165 ---------------------KEIEVIPNFVDEDRFRPKPDE--------------------ALKRRLGAPEGEKVLIHI 203 (371)
T ss_pred ---------------------CCEEEecCCcCHhhcCCCchH--------------------HHHHhcCCCCCCeEEEEe
Confidence 189999999998776542210 112234445678899999
Q ss_pred eCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHH
Q 002665 323 ARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIY 402 (895)
Q Consensus 323 grl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly 402 (895)
||+.+.||++.+++|+.++.+. ...++ +++|.+++. ..+.+.+.++++.++|.|+|.. +++..+|
T Consensus 204 g~l~~~K~~~~li~a~~~l~~~-~~~~l-~i~G~g~~~-----------~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~ 268 (371)
T cd04962 204 SNFRPVKRIDDVIRIFAKVRKE-VPARL-LLVGDGPER-----------SPAERLARELGLQDDVLFLGKQ--DHVEELL 268 (371)
T ss_pred cccccccCHHHHHHHHHHHHhc-CCceE-EEEcCCcCH-----------HHHHHHHHHcCCCceEEEecCc--ccHHHHH
Confidence 9999999999999999988542 22333 577877653 3344667788888899999974 6899999
Q ss_pred HHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHhhCHHHHHHHH
Q 002665 403 RLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCR 482 (895)
Q Consensus 403 ~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~ 482 (895)
+.| |++|+||..|+||++++|||+||+|||+++.|+..|++.++.+|++++++|+++++++|.+++++++.+.+++
T Consensus 269 ~~~----d~~v~ps~~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~~~~~~~~~ 344 (371)
T cd04962 269 SIA----DLFLLPSEKESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLEDDELWQEFS 344 (371)
T ss_pred Hhc----CEEEeCCCcCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHHhCHHHHHHHH
Confidence 999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH-hhCCHHHHHHHHHHHHHHh
Q 002665 483 QNGLKNI-HQFSWPEHCKSYLSRISSC 508 (895)
Q Consensus 483 ~~~~~~v-~~~s~~~~a~~~~~~l~~~ 508 (895)
+++++.+ ++|||+.++++|.+.|+++
T Consensus 345 ~~~~~~~~~~fs~~~~~~~~~~~y~~~ 371 (371)
T cd04962 345 RAARNRAAERFDSERIVPQYEALYRRL 371 (371)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 9999996 7999999999999999864
No 22
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=100.00 E-value=9.8e-35 Score=329.63 Aligned_cols=278 Identities=19% Similarity=0.256 Sum_probs=224.6
Q ss_pred CCCcEEEeccCCchHHHHHHhc--cCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEE
Q 002665 146 IWPVAIHGHYADAGDAAALLSG--ALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVI 223 (895)
Q Consensus 146 ~~pDvIh~h~~~~~~~~~~~~~--~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi 223 (895)
.+||+||+|++..+..+..+++ ..+.|.++|.|+...... .. ...++. .....++.+|.|+
T Consensus 117 ~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~-~~-----------~~~~~~-----~~~~~~~~ad~vv 179 (406)
T PRK15427 117 FVADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSR-EV-----------LNHYTP-----EYQQLFRRGDLML 179 (406)
T ss_pred CCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccc-hh-----------hhhhhH-----HHHHHHHhCCEEE
Confidence 5699999999877777777765 445678999997632110 00 001110 1233578999999
Q ss_pred ecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCch
Q 002665 224 TSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPI 303 (895)
Q Consensus 224 ~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (895)
++|+...+.+.. + +..+. ++.++|||+|.+.|.+....
T Consensus 180 ~~S~~~~~~l~~-~-g~~~~---------------------ki~vi~nGvd~~~f~~~~~~------------------- 217 (406)
T PRK15427 180 PISDLWAGRLQK-M-GCPPE---------------------KIAVSRMGVDMTRFSPRPVK------------------- 217 (406)
T ss_pred ECCHHHHHHHHH-c-CCCHH---------------------HEEEcCCCCCHHHcCCCccc-------------------
Confidence 999977665533 3 22333 89999999999988643210
Q ss_pred hhhhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhhhHHHHHHHHHHHHHcC
Q 002665 304 WSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYD 382 (895)
Q Consensus 304 ~~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~l~~~~~~~~~~i~~~~~~~~ 382 (895)
...+...|+++||+.+.||++.+++|+..+.+.. +++.+ ++|+++. ..++.+.+++++
T Consensus 218 --------~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~--~~~~l~ivG~G~~-----------~~~l~~~~~~~~ 276 (406)
T PRK15427 218 --------APATPLEIISVARLTEKKGLHVAIEACRQLKEQG--VAFRYRILGIGPW-----------ERRLRTLIEQYQ 276 (406)
T ss_pred --------cCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhC--CCEEEEEEECchh-----------HHHHHHHHHHcC
Confidence 0124567999999999999999999999986433 34554 7888764 245667888999
Q ss_pred CCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCC------CCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEe
Q 002665 383 LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFI------EPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLV 456 (895)
Q Consensus 383 l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~------eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv 456 (895)
+.++|.|.|+++.+++.++|+.| |++|+||.. ||+|++++||||||+|||+|+.||..|++.++.+|+++
T Consensus 277 l~~~V~~~G~~~~~el~~~l~~a----Dv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv 352 (406)
T PRK15427 277 LEDVVEMPGFKPSHEVKAMLDDA----DVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLV 352 (406)
T ss_pred CCCeEEEeCCCCHHHHHHHHHhC----CEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEe
Confidence 99999999999999999999999 999999974 99999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHhh-CHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHHHHH
Q 002665 457 DPHDQQSIADALLKLVS-DKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRISS 507 (895)
Q Consensus 457 ~p~d~~~la~ai~~ll~-~~~~~~~~~~~~~~~v-~~~s~~~~a~~~~~~l~~ 507 (895)
+|+|+++++++|.++++ |+++++++++++++.+ ++|+|+..++++.++|++
T Consensus 353 ~~~d~~~la~ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 353 PENDAQALAQRLAAFSQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred CCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 99999999999999999 9999999999999999 699999999999999875
No 23
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=1.9e-34 Score=325.92 Aligned_cols=367 Identities=20% Similarity=0.220 Sum_probs=265.4
Q ss_pred eEEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhh
Q 002665 7 NMKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLM 86 (895)
Q Consensus 7 ~~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 86 (895)
.+|++|..+. +.||+++++.+|++.|.++| ++++|++.... +.-.+.+
T Consensus 2 ~~il~ii~~~-------------~~GG~e~~~~~l~~~l~~~~--~~~~v~~~~~~--------~~~~~~~--------- 49 (374)
T TIGR03088 2 PLIVHVVYRF-------------DVGGLENGLVNLINHLPADR--YRHAVVALTEV--------SAFRKRI--------- 49 (374)
T ss_pred ceEEEEeCCC-------------CCCcHHHHHHHHHhhccccc--cceEEEEcCCC--------ChhHHHH---------
Confidence 4677777433 47999999999999999998 89999985311 1100011
Q ss_pred cccCCCCCcEEEEecCCCCCccccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHHh
Q 002665 87 QGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLS 166 (895)
Q Consensus 87 ~~~~~~~g~~i~r~~~~~~~~~l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~~ 166 (895)
...|+++++++..+.. ...+...+.+.+ .+ .+|||||+|... ...+..++
T Consensus 50 ----~~~~i~~~~~~~~~~~-----------~~~~~~~l~~~l-------~~-------~~~Divh~~~~~-~~~~~~~~ 99 (374)
T TIGR03088 50 ----QRPDVAFYALHKQPGK-----------DVAVYPQLYRLL-------RQ-------LRPDIVHTRNLA-ALEAQLPA 99 (374)
T ss_pred ----HhcCceEEEeCCCCCC-----------ChHHHHHHHHHH-------HH-------hCCCEEEEcchh-HHHHHHHH
Confidence 1137888877643210 001112222222 22 579999999753 33344556
Q ss_pred ccCCCCE-EEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHH
Q 002665 167 GALNVPM-VFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 245 (895)
Q Consensus 167 ~~~~ip~-v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~ 245 (895)
+..++|. +++.|+....... + ....+++. ++...+.+|.++++|+...+.+...+.. .+.
T Consensus 100 ~~~~~~~~i~~~h~~~~~~~~-----~------~~~~~~~~-----~~~~~~~~~~~i~vs~~~~~~~~~~~~~-~~~-- 160 (374)
T TIGR03088 100 ALAGVPARIHGEHGRDVFDLD-----G------SNWKYRWL-----RRLYRPLIHHYVAVSRDLEDWLRGPVKV-PPA-- 160 (374)
T ss_pred HhcCCCeEEEeecCcccccch-----h------hHHHHHHH-----HHHHHhcCCeEEEeCHHHHHHHHHhcCC-Chh--
Confidence 6667775 5666654211100 0 00112222 3334567899999999877766554432 222
Q ss_pred HHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCC
Q 002665 246 RKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARP 325 (895)
Q Consensus 246 ~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl 325 (895)
++.+||||+|.+.|.+..... ...........++++|+++||+
T Consensus 161 -------------------~~~vi~ngvd~~~~~~~~~~~------------------~~~~~~~~~~~~~~~i~~vGrl 203 (374)
T TIGR03088 161 -------------------KIHQIYNGVDTERFHPSRGDR------------------SPILPPDFFADESVVVGTVGRL 203 (374)
T ss_pred -------------------hEEEeccCccccccCCCccch------------------hhhhHhhcCCCCCeEEEEEecC
Confidence 889999999998886532110 0011112224567899999999
Q ss_pred CCCCCHHHHHHHHHhcccccCC--CcEEE-EEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHH
Q 002665 326 DPKKNITTLVKAFGECRPLREL--ANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIY 402 (895)
Q Consensus 326 ~~~Kgi~~ll~A~~~l~~~~~~--~~l~l-ivG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly 402 (895)
.+.||++.+++|+..+.+..+. +++.+ ++|+++.. ..+...++.+++..++.|+|. .+|+..+|
T Consensus 204 ~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~~~-----------~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~ 270 (374)
T TIGR03088 204 QAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGPAR-----------GACEQMVRAAGLAHLVWLPGE--RDDVPALM 270 (374)
T ss_pred CcccCHHHHHHHHHHHHHhCcccccceEEEEecCCchH-----------HHHHHHHHHcCCcceEEEcCC--cCCHHHHH
Confidence 9999999999999998654443 25554 77877642 345577788899889999996 58999999
Q ss_pred HHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHhhCHHHHHHHH
Q 002665 403 RLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCR 482 (895)
Q Consensus 403 ~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~ 482 (895)
+.| |++|+||..||||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++++++.+..++
T Consensus 271 ~~a----di~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~ 346 (374)
T TIGR03088 271 QAL----DLFVLPSLAEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSDPAARRAHG 346 (374)
T ss_pred Hhc----CEEEeccccccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHH
Confidence 999 9999999999999999999999999999999999999999899999999999999999999999999999999
Q ss_pred HHHHHHH-hhCCHHHHHHHHHHHHHHh
Q 002665 483 QNGLKNI-HQFSWPEHCKSYLSRISSC 508 (895)
Q Consensus 483 ~~~~~~v-~~~s~~~~a~~~~~~l~~~ 508 (895)
+++++.+ ++|||+.++++|.++|+++
T Consensus 347 ~~a~~~~~~~fs~~~~~~~~~~~y~~~ 373 (374)
T TIGR03088 347 AAGRARAEQQFSINAMVAAYAGLYDQL 373 (374)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHh
Confidence 9999998 6999999999999999876
No 24
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=100.00 E-value=9.1e-35 Score=339.12 Aligned_cols=444 Identities=19% Similarity=0.174 Sum_probs=278.2
Q ss_pred EEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccc-cccc-cccchh-
Q 002665 8 MKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPS-EMLN-RKNTEN- 84 (895)
Q Consensus 8 ~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~-e~~~-~~~~~~- 84 (895)
||+||+... +....+||.+.++..|+++|++.| |+|+|+++.+..-.......... .... ......
T Consensus 1 ~Il~v~~E~---------~p~~k~GGl~~~~~~L~~aL~~~G--~~V~Vi~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (476)
T cd03791 1 KVLFVASEV---------APFAKTGGLGDVVGALPKALAKLG--HDVRVIMPKYGRILDELRGQLLVLRLFGVPVGGRPE 69 (476)
T ss_pred CEEEEEccc---------cccccCCcHHHHHHHHHHHHHHCC--CeEEEEecCCcchhhHhccCeEEEEEEeeccCCcee
Confidence 688999654 334589999999999999999999 99999998754311100000000 0000 000000
Q ss_pred -hhcccCCCCCcEEEEecCCCCCcccccc-----ccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCc
Q 002665 85 -LMQGLGESSGAYIIRIPFGPKDKYVQKE-----LLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADA 158 (895)
Q Consensus 85 -~~~~~~~~~g~~i~r~~~~~~~~~l~k~-----~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~ 158 (895)
.--.....+|+.++++..+.. ..+. ...++...+ ..+..+.+...+.+... ..+|||||+|.|.+
T Consensus 70 ~~~~~~~~~~gv~~~~l~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~f~~~~~~~l~~~-----~~~pDviH~hd~~t 140 (476)
T cd03791 70 YVGVFELPVDGVPVYFLDNPDY---FDRPGLYDDSGYDYEDNA-ERFALFSRAALELLRRL-----GWKPDIIHCHDWHT 140 (476)
T ss_pred EEEEEEEEeCCceEEEEcChHH---cCCCCCCCccCCCCccHH-HHHHHHHHHHHHHHHhc-----CCCCcEEEECchHH
Confidence 000001225788888876432 1111 111222221 11111222222222221 25799999999998
Q ss_pred hHHHHHHhcc------CCCCEEEEeCCCchhhH---HHHHHhCCCC-hhhhhhHhhHHHhHHHHHhhccccCEEEecCHH
Q 002665 159 GDAAALLSGA------LNVPMVFTGHSLGRDKL---EQLLKQGRLS-RDEINTTYKIMRRIEAEELSLDASEIVITSTRQ 228 (895)
Q Consensus 159 ~~~~~~~~~~------~~ip~v~t~H~~~~~~~---~~~~~~g~~~-~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~ 228 (895)
+.++..++.. .++|+|+|.|++..... ..+...+... .........+...+..++..+..||.|+++|+.
T Consensus 141 ~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~ 220 (476)
T cd03791 141 GLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPT 220 (476)
T ss_pred HHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecCHh
Confidence 8888877766 38999999999854321 1111111000 000000001112234577789999999999998
Q ss_pred HHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCC-chhhhh
Q 002665 229 EIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDP-PIWSEI 307 (895)
Q Consensus 229 ~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 307 (895)
..+++...+.+.. +...+..+ ..++.+||||||.+.|.|........ .+......... ......
T Consensus 221 ~~~~i~~~~~~~g--l~~~~~~~-----------~~ki~~I~NGid~~~~~p~~~~~~~~--~~~~~~~~~~~~~k~~l~ 285 (476)
T cd03791 221 YAREILTPEFGEG--LDGLLRAR-----------AGKLSGILNGIDYDVWNPATDPHLPA--NYSADDLEGKAENKAALQ 285 (476)
T ss_pred HHHHhCCCCCCcc--hHHHHHhc-----------cCCeEEEeCCCcCcccCccccchhhh--cCCccccccHHHHHHHHH
Confidence 8776643221110 01111111 13899999999999998754221100 00000000000 011223
Q ss_pred hhccC--CCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCC
Q 002665 308 MHFFS--NPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYG 385 (895)
Q Consensus 308 ~~~~~--~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~ 385 (895)
++++. .++.++|+++||+.+.||++.+++|+..+.+. ..++ +++|.++. .+...+..+..++ .+
T Consensus 286 ~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~l-vi~G~g~~---------~~~~~~~~~~~~~--~~ 351 (476)
T cd03791 286 EELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLEL--GGQL-VILGSGDP---------EYEEALRELAARY--PG 351 (476)
T ss_pred HHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHc--CcEE-EEEecCCH---------HHHHHHHHHHHhC--CC
Confidence 34444 36889999999999999999999999998642 2333 46777642 2234455555554 45
Q ss_pred CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccCC------ceEEeCCC
Q 002665 386 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLD------NGLLVDPH 459 (895)
Q Consensus 386 ~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~------~g~lv~p~ 459 (895)
++.+.+..+.+++..+|+.| |++|+||..|+||++++|||+||+|||+++.||..|++.++. +|++++|.
T Consensus 352 ~v~~~~~~~~~~~~~~~~~a----Dv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~ 427 (476)
T cd03791 352 RVAVLIGYDEALAHLIYAGA----DFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGY 427 (476)
T ss_pred cEEEEEeCCHHHHHHHHHhC----CEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCC
Confidence 77776666667778999999 999999999999999999999999999999999999999877 89999999
Q ss_pred CHHHHHHHHHHHhh---CHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Q 002665 460 DQQSIADALLKLVS---DKQLWERCRQNGLKNIHQFSWPEHCKSYLSRIS 506 (895)
Q Consensus 460 d~~~la~ai~~ll~---~~~~~~~~~~~~~~~v~~~s~~~~a~~~~~~l~ 506 (895)
|+++++++|.++++ +++.+.++++++.+ +.|||+..+++|+++|+
T Consensus 428 ~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 428 NADALLAALRRALALYRDPEAWRKLQRNAMA--QDFSWDRSAKEYLELYR 475 (476)
T ss_pred CHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--cCCChHHHHHHHHHHHh
Confidence 99999999999886 56777777666544 47999999999999986
No 25
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=100.00 E-value=4e-34 Score=325.51 Aligned_cols=377 Identities=17% Similarity=0.171 Sum_probs=250.6
Q ss_pred HHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhhcccCCCCCcEEEEecCCCCCccccccccCCCc
Q 002665 39 VELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHI 118 (895)
Q Consensus 39 ~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~g~~i~r~~~~~~~~~l~k~~~~~~l 118 (895)
.+||++|+++| |+|+++|.... +.. ..|+++++++.++.. .+ ..+++.
T Consensus 14 ~~la~~L~~~G--~~v~~~~~~~~-~~~-------------------------~~~v~~~~~~~~~~~---~~-~~~~~~ 61 (396)
T cd03818 14 RHLAPALAAQG--HEVVFLTEPNA-APP-------------------------PGGVRVVRYRPPRGP---TS-GTHPYL 61 (396)
T ss_pred HHHHHHHHHCC--CEEEEEecCCC-CCC-------------------------CCCeeEEEecCCCCC---CC-CCCccc
Confidence 46999999998 99999998621 000 016899998866441 12 456677
Q ss_pred hhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHHhcc-CCCCEEEEeCCCchhhHHHH-HHhCCCCh
Q 002665 119 PEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGA-LNVPMVFTGHSLGRDKLEQL-LKQGRLSR 196 (895)
Q Consensus 119 ~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~~~~-~~ip~v~t~H~~~~~~~~~~-~~~g~~~~ 196 (895)
..|...+.+.... .+.+.... .++.+|||||+|..... +..+... .++|+|.+.|-+........ ..... ..
T Consensus 62 ~~~~~~~~~~~~~-~~~~~~~~--~~~~~pdvi~~h~~~~~--~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~ 135 (396)
T cd03818 62 REFEEAVLRGQAV-ARALLALR--AKGFRPDVIVAHPGWGE--TLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEF-PP 135 (396)
T ss_pred hhHHHHHHHHHHH-HHHHHHHH--hcCCCCCEEEECCccch--hhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCC-CC
Confidence 7775544432222 11111110 12367999999964321 1223333 46888876653322110000 00000 00
Q ss_pred hhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCC
Q 002665 197 DEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFH 276 (895)
Q Consensus 197 ~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~ 276 (895)
. .....+...+.......++.||.+|++|+...+.+...+. .++.|||||+|.+
T Consensus 136 ~-~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~-------------------------~ki~vI~ngvd~~ 189 (396)
T cd03818 136 S-LDDALRLRNRNALILLALAQADAGVSPTRWQRSTFPAELR-------------------------SRISVIHDGIDTD 189 (396)
T ss_pred c-hhHHHHHHHhhhHhHHHHHhCCEEECCCHHHHhhCcHhhc-------------------------cceEEeCCCcccc
Confidence 0 0000111111112446789999999999977665433332 1899999999999
Q ss_pred CcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeC-CCCCCCHHHHHHHHHhcccccCCCcEEEEEe
Q 002665 277 HIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALAR-PDPKKNITTLVKAFGECRPLRELANLTLIMG 355 (895)
Q Consensus 277 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgr-l~~~Kgi~~ll~A~~~l~~~~~~~~l~livG 355 (895)
.|.+...... .........++.++|+|+|| +.+.||++.+++|+..+.+..+...+ +++|
T Consensus 190 ~f~~~~~~~~------------------~~~~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~l-vivG 250 (396)
T cd03818 190 RLRPDPQARL------------------RLPNGRVLTPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDARV-VIVG 250 (396)
T ss_pred ccCCCchhhh------------------cccccccCCCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcEE-EEEc
Confidence 8876431110 00001112357789999998 99999999999999998654444444 3566
Q ss_pred cCC-CchhhhhhhHHHHHHHHHHHH-HcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCC
Q 002665 356 NRD-DIDEMSGTNAALLLSILKLID-KYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGL 433 (895)
Q Consensus 356 ~~~-~~~~l~~~~~~~~~~i~~~~~-~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~ 433 (895)
++. .+.......+.+...+.+... +++ .++|.|+|+++.+++..+|+.| |++++||..|++|++++||||||+
T Consensus 251 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~V~f~G~v~~~~~~~~l~~a----dv~v~~s~~e~~~~~llEAmA~G~ 325 (396)
T cd03818 251 GDGVSYGAPPPDGESWKQHMLDELGGRLD-LSRVHFLGRVPYDQYLALLQVS----DVHVYLTYPFVLSWSLLEAMACGC 325 (396)
T ss_pred CCCcccCCCCCCcccHHHHHHHHhhcccC-cceEEEeCCCCHHHHHHHHHhC----cEEEEcCcccccchHHHHHHHCCC
Confidence 532 221111111111222222222 222 3689999999999999999999 999999999999999999999999
Q ss_pred CEEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHhhCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHH
Q 002665 434 PIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLS 503 (895)
Q Consensus 434 PVvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~v-~~~s~~~~a~~~~~ 503 (895)
|||+|+.||..|++.++.+|+++++.|+++++++|.+++++++.+.++++++++.+ ++|||+.++++|++
T Consensus 326 PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~l~~~ar~~~~~~fs~~~~~~~~~~ 396 (396)
T cd03818 326 LVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELLDDPARRARLRRAARRTALRYDLLSVCLPRQLA 396 (396)
T ss_pred CEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhccHHHHHHHHhC
Confidence 99999999999999998999999999999999999999999999999999999999 46999999998863
No 26
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=100.00 E-value=1.8e-33 Score=317.35 Aligned_cols=370 Identities=16% Similarity=0.206 Sum_probs=262.2
Q ss_pred eEEEEEecccccccCccCCCCCC-CCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhh
Q 002665 7 NMKYLCSLHGLIRGENMELGRDS-DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENL 85 (895)
Q Consensus 7 ~~i~~i~~~~~~~~~~~~~g~~~-~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~ 85 (895)
.||+|+...-+ +-|| ..||+++++.++++.|+ ++|+++|.... +-+..+.
T Consensus 3 ~~~~~~~~~~~--------~~p~~~~g~ve~~~~~~~~~l~-----~~~~~~~~~~~--------~~~~~~~-------- 53 (380)
T PRK15484 3 DKIIFTVTPIF--------SIPPRGAAAVETWIYQVAKRTS-----IPNRIACIKNP--------GYPEYTK-------- 53 (380)
T ss_pred ceEEEEeccCC--------CCCCccccHHHHHHHHhhhhcc-----CCeeEEEecCC--------CCCchhh--------
Confidence 58888885544 3333 47899999999999993 47899998732 1111101
Q ss_pred hcccCCCCCcEEEEecCCCCCccccccccCCCc--hhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHH
Q 002665 86 MQGLGESSGAYIIRIPFGPKDKYVQKELLWPHI--PEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAA 163 (895)
Q Consensus 86 ~~~~~~~~g~~i~r~~~~~~~~~l~k~~~~~~l--~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~ 163 (895)
..+|+.++++++... |.+....|-.+ ..|...++..... . ...++||||+|... .+...
T Consensus 54 -----~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~----~-------~~~~~~vi~v~~~~-~~~~~ 114 (380)
T PRK15484 54 -----VNDNCDIHYIGFSRI--YKRLFQKWTRLDPLPYSQRILNIAHK----F-------TITKDSVIVIHNSM-KLYRQ 114 (380)
T ss_pred -----ccCCCceEEEEeccc--cchhhhhhhccCchhHHHHHHHHHHh----c-------CCCCCcEEEEeCcH-HhHHH
Confidence 124778888765322 11100111111 1222222222211 0 11459999999753 33333
Q ss_pred HHhccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChH
Q 002665 164 LLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPV 243 (895)
Q Consensus 164 ~~~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~ 243 (895)
...+..+.|+|+++|+.+... .+..++.++++|+...+.+...++.
T Consensus 115 ~~~~~~~~~~v~~~h~~~~~~------------------------------~~~~~~~ii~~S~~~~~~~~~~~~~---- 160 (380)
T PRK15484 115 IRERAPQAKLVMHMHNAFEPE------------------------------LLDKNAKIIVPSQFLKKFYEERLPN---- 160 (380)
T ss_pred HHhhCCCCCEEEEEecccChh------------------------------HhccCCEEEEcCHHHHHHHHhhCCC----
Confidence 445556789999999763211 1346789999998776654433221
Q ss_pred HHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEe
Q 002665 244 LERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALA 323 (895)
Q Consensus 244 ~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vg 323 (895)
.++.+||||+|...|.+... .....++...++.++|+++|
T Consensus 161 --------------------~~i~vIpngvd~~~~~~~~~--------------------~~~~~~~~~~~~~~~il~~G 200 (380)
T PRK15484 161 --------------------ADISIVPNGFCLETYQSNPQ--------------------PNLRQQLNISPDETVLLYAG 200 (380)
T ss_pred --------------------CCEEEecCCCCHHHcCCcch--------------------HHHHHHhCCCCCCeEEEEec
Confidence 17899999999887754220 01122344455778999999
Q ss_pred CCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHH
Q 002665 324 RPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIY 402 (895)
Q Consensus 324 rl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly 402 (895)
|+.+.||++.+++|+..+.+.. +++.+ ++|+++.... .+...+...+.+++.+++ .++.|.|+++.+++..+|
T Consensus 201 rl~~~Kg~~~Li~A~~~l~~~~--p~~~lvivG~g~~~~~--~~~~~~~~~l~~~~~~l~--~~v~~~G~~~~~~l~~~~ 274 (380)
T PRK15484 201 RISPDKGILLLMQAFEKLATAH--SNLKLVVVGDPTASSK--GEKAAYQKKVLEAAKRIG--DRCIMLGGQPPEKMHNYY 274 (380)
T ss_pred cCccccCHHHHHHHHHHHHHhC--CCeEEEEEeCCccccc--cchhHHHHHHHHHHHhcC--CcEEEeCCCCHHHHHHHH
Confidence 9999999999999999986433 44444 6787653211 112345566666666665 478999999999999999
Q ss_pred HHhhcCCcEEEecCC-CCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceE-EeCCCCHHHHHHHHHHHhhCHHHHHH
Q 002665 403 RLAAKTKGVFINPAF-IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGL-LVDPHDQQSIADALLKLVSDKQLWER 480 (895)
Q Consensus 403 ~~a~~~~Dv~v~ps~-~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~-lv~p~d~~~la~ai~~ll~~~~~~~~ 480 (895)
+.| |++|+||. .|+||++++||||||+|||+++.||..|++.++.+|+ +++|.|+++++++|.++++|++. .+
T Consensus 275 ~~a----Dv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d~~~-~~ 349 (380)
T PRK15484 275 PLA----DLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLADPEL-TQ 349 (380)
T ss_pred HhC----CEEEeCCCCccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcCHHH-HH
Confidence 999 99999997 5999999999999999999999999999999999998 66899999999999999999975 77
Q ss_pred HHHHHHHHH-hhCCHHHHHHHHHHHHHHhh
Q 002665 481 CRQNGLKNI-HQFSWPEHCKSYLSRISSCK 509 (895)
Q Consensus 481 ~~~~~~~~v-~~~s~~~~a~~~~~~l~~~~ 509 (895)
+++++++.+ ++|||+.++++|++.|++..
T Consensus 350 ~~~~ar~~~~~~fsw~~~a~~~~~~l~~~~ 379 (380)
T PRK15484 350 IAEQAKDFVFSKYSWEGVTQRFEEQIHNWF 379 (380)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHhc
Confidence 999999988 79999999999999998753
No 27
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=100.00 E-value=1.6e-33 Score=320.34 Aligned_cols=387 Identities=19% Similarity=0.200 Sum_probs=263.6
Q ss_pred eEEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhh
Q 002665 7 NMKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLM 86 (895)
Q Consensus 7 ~~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 86 (895)
|||+++...- ..||.++++.+||++|+++| |+|+|+|.... .... + +..
T Consensus 1 mkIl~~~~~~-------------~~gG~e~~~~~la~~L~~~G--~~V~v~~~~~~--~~~~-~----~~~--------- 49 (392)
T cd03805 1 LRVAFIHPDL-------------GIGGAERLVVDAALALQSRG--HEVTIYTSHHD--PSHC-F----EET--------- 49 (392)
T ss_pred CeEEEECCCC-------------CCchHHHHHHHHHHHHHhCC--CeEEEEcCCCC--chhc-c----hhc---------
Confidence 7999996322 37999999999999999999 99999997421 1000 0 000
Q ss_pred cccCCCCCcEEEEecCCCCCccccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHHh
Q 002665 87 QGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLS 166 (895)
Q Consensus 87 ~~~~~~~g~~i~r~~~~~~~~~l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~~ 166 (895)
...++.++.++.. ..+. .+.....+ ...+......+...+. ...+||+||+|....+.......
T Consensus 50 ----~~~~~~i~~~~~~-----~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~Dvi~~~~~~~~~~~~~~~ 113 (392)
T cd03805 50 ----KDGTLPVRVRGDW-----LPRS-IFGRFHIL----CAYLRMLYLALYLLLL--PDEKYDVFIVDQVSACVPLLKLF 113 (392)
T ss_pred ----cCCeeEEEEEeEE-----Ecch-hhHhHHHH----HHHHHHHHHHHHHHhc--ccCCCCEEEEcCcchHHHHHHHh
Confidence 0012444433321 0000 01111111 1111111111000000 11469999999765444333222
Q ss_pred ccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhh-HHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHH
Q 002665 167 GALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYK-IMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 245 (895)
Q Consensus 167 ~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~ 245 (895)
.+.|++++.|.. +.. ... ........++ +.++ .|+..++.+|.|+++|+...+.+...|+.....
T Consensus 114 --~~~~~i~~~h~~--~~~---~~~---~~~~~~~~~~~~~~~--~e~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~-- 179 (392)
T cd03805 114 --SPSKILFYCHFP--DQL---LAQ---RGSLLKRLYRKPFDW--LEEFTTGMADKIVVNSNFTASVFKKTFPSLAKN-- 179 (392)
T ss_pred --cCCcEEEEEecC--hHH---hcC---CCcHHHHHHHHHHHH--HHHHHhhCceEEEEcChhHHHHHHHHhcccccC--
Confidence 238999999942 221 111 1111111222 2222 377889999999999998777665555442221
Q ss_pred HHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCC
Q 002665 246 RKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARP 325 (895)
Q Consensus 246 ~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl 325 (895)
.+.+||||+|.+.|.+..... ........++.++|+++||+
T Consensus 180 -------------------~~~vi~n~vd~~~~~~~~~~~--------------------~~~~~~~~~~~~~i~~~grl 220 (392)
T cd03805 180 -------------------PREVVYPCVDTDSFESTSEDP--------------------DPGLLIPKSGKKTFLSINRF 220 (392)
T ss_pred -------------------CcceeCCCcCHHHcCcccccc--------------------cccccccCCCceEEEEEeee
Confidence 346999999998886532110 01112234677899999999
Q ss_pred CCCCCHHHHHHHHHhcccccC-CCcEEE-EEecCCCchhhhhhhHHHHHHHHHHHHH-cCCCCCEEeCCCCCCCcHHHHH
Q 002665 326 DPKKNITTLVKAFGECRPLRE-LANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDK-YDLYGQVAYPKHHKQSDVPDIY 402 (895)
Q Consensus 326 ~~~Kgi~~ll~A~~~l~~~~~-~~~l~l-ivG~~~~~~~l~~~~~~~~~~i~~~~~~-~~l~~~v~~~g~~~~~el~~ly 402 (895)
.+.||++.+++|+.++.+..+ .+++.+ ++|+++... ....++..++.+++++ +++.++|.|+|+++.+++..+|
T Consensus 221 ~~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~~---~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~~~~~~~~~l 297 (392)
T cd03805 221 ERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPRV---AENVEYLEELQRLAEELLLLEDQVIFLPSISDSQKELLL 297 (392)
T ss_pred cccCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCCC---chhHHHHHHHHHHHHHhcCCCceEEEeCCCChHHHHHHH
Confidence 999999999999999865331 134444 677765321 1123456778888888 8999999999999999999999
Q ss_pred HHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHhhCHHHHHHHH
Q 002665 403 RLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCR 482 (895)
Q Consensus 403 ~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~ 482 (895)
+.| |++++||..|+||++++||||||+|||+++.||..|++.++.+|+++++ |+++++++|.+++++++.+++++
T Consensus 298 ~~a----d~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~~~~~~~~ 372 (392)
T cd03805 298 SSA----RALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDPDLADRMG 372 (392)
T ss_pred hhC----eEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHHhChHHHHHHH
Confidence 999 9999999999999999999999999999999999999999889999976 99999999999999999999999
Q ss_pred HHHHHHH-hhCCHHHHHHHH
Q 002665 483 QNGLKNI-HQFSWPEHCKSY 501 (895)
Q Consensus 483 ~~~~~~v-~~~s~~~~a~~~ 501 (895)
+++++.+ ++|||+.+++++
T Consensus 373 ~~a~~~~~~~~s~~~~~~~~ 392 (392)
T cd03805 373 AAGRKRVKEKFSTEAFAERL 392 (392)
T ss_pred HHHHHHHHHhcCHHHHhhhC
Confidence 9999998 699999998764
No 28
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=4e-33 Score=328.06 Aligned_cols=380 Identities=15% Similarity=0.109 Sum_probs=254.0
Q ss_pred CCCchhhHHHHHHHHHhcCCCcc------------eEEEeeccccCCCCCCCCCccccccccccchhhhcccCCCCCcEE
Q 002665 30 DTGGQVKYVVELARALGSMPGVY------------RVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYI 97 (895)
Q Consensus 30 ~~GG~~~~v~~La~~L~~~g~~~------------~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~g~~i 97 (895)
..||.++++.+|+.+|.+.+ . ++.|++.......-. +...+.+ ...|+.+
T Consensus 292 ~~GGAEr~~~~La~~l~~~~--~~~~~~~g~g~~~~~~V~~~~~~~~~g~---~~~~~~L-------------~~~Gv~v 353 (694)
T PRK15179 292 GAGGAERQFVNTAVALQSAI--QQGQSIAGYGVLGPVQVVCRSLRSREGA---DFFAATL-------------ADAGIPV 353 (694)
T ss_pred CCCcHHHHHHHHHHHHHhcc--cCcccccCccCCCCcEEEEEecccccCc---chHHHHH-------------HhCCCeE
Confidence 47999999999999999983 2 244444321100000 0000011 1147888
Q ss_pred EEecCCCCCccccccc-cCCCchh----HHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHHhccCCCC
Q 002665 98 IRIPFGPKDKYVQKEL-LWPHIPE----FVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVP 172 (895)
Q Consensus 98 ~r~~~~~~~~~l~k~~-~~~~l~~----f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~~~~~~ip 172 (895)
+.++..+. ....... ....+.. +.......++++.+.+++ .+|||||+|...+..++..+++..++|
T Consensus 354 ~~l~~~~~-~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~lk~-------~kpDIVH~h~~~a~~lg~lAa~~~gvP 425 (694)
T PRK15179 354 SVYSDMQA-WGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMRS-------SVPSVVHIWQDGSIFACALAALLAGVP 425 (694)
T ss_pred EEeccCCc-cCcccccccchhhHHHhhhcchhHHHHHHHHHHHHHH-------cCCcEEEEeCCcHHHHHHHHHHHcCCC
Confidence 88765432 1111000 0000110 011223334444444444 579999999887778888888888999
Q ss_pred EEE-EeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHHHHHh
Q 002665 173 MVF-TGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRAR 251 (895)
Q Consensus 173 ~v~-t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~ 251 (895)
+|+ +.|++........ +...++... .......++.+++.|+...+.+...++. .+.
T Consensus 426 vIv~t~h~~~~~~~~~~----------~~~~~~~l~----~~l~~~~~~i~Vs~S~~~~~~l~~~~g~-~~~-------- 482 (694)
T PRK15179 426 RIVLSVRTMPPVDRPDR----------YRVEYDIIY----SELLKMRGVALSSNSQFAAHRYADWLGV-DER-------- 482 (694)
T ss_pred EEEEEeCCCccccchhH----------HHHHHHHHH----HHHHhcCCeEEEeCcHHHHHHHHHHcCC-Chh--------
Confidence 877 5676533211100 001111110 1111223456677777665555444432 222
Q ss_pred HhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCCCCCCCH
Q 002665 252 IKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNI 331 (895)
Q Consensus 252 ~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl~~~Kgi 331 (895)
++.|||||||...|.+..... ..+..+ ......+.++|+++||+.+.||+
T Consensus 483 -------------kI~VI~NGVd~~~f~~~~~~~----------------~~~~~~-~~~~~~~~~vIg~VGRL~~~KG~ 532 (694)
T PRK15179 483 -------------RIPVVYNGLAPLKSVQDDACT----------------AMMAQF-DARTSDARFTVGTVMRVDDNKRP 532 (694)
T ss_pred -------------HEEEECCCcCHHhcCCCchhh----------------HHHHhh-ccccCCCCeEEEEEEeCCccCCH
Confidence 899999999988875421100 000000 01123456799999999999999
Q ss_pred HHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcE
Q 002665 332 TTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGV 411 (895)
Q Consensus 332 ~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv 411 (895)
+.+++|+.++.+..++..+ +|+|+++.. ..+.++++++++.++|.|+|+. +++..+|+.| |+
T Consensus 533 ~~LI~A~a~l~~~~p~~~L-vIvG~G~~~-----------~~L~~l~~~lgL~~~V~flG~~--~dv~~ll~aa----Dv 594 (694)
T PRK15179 533 FLWVEAAQRFAASHPKVRF-IMVGGGPLL-----------ESVREFAQRLGMGERILFTGLS--RRVGYWLTQF----NA 594 (694)
T ss_pred HHHHHHHHHHHHHCcCeEE-EEEccCcch-----------HHHHHHHHHcCCCCcEEEcCCc--chHHHHHHhc----CE
Confidence 9999999988654443333 478887643 4466788999999999999995 5899999999 99
Q ss_pred EEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCH--HHHHHHHHHHhhCHHHHHHHHHHHHHHH
Q 002665 412 FINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQ--QSIADALLKLVSDKQLWERCRQNGLKNI 489 (895)
Q Consensus 412 ~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~--~~la~ai~~ll~~~~~~~~~~~~~~~~v 489 (895)
+|+||..||||++++|||+||+|||+|+.||..|++.++.+|++|+|+|+ ++++++|.+++.+......+++++++++
T Consensus 595 ~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~~~~~l~~~ar~~a 674 (694)
T PRK15179 595 FLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMCAADPGIARKAADWA 674 (694)
T ss_pred EEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhChhccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998874 6899999998886666667888999998
Q ss_pred -hhCCHHHHHHHHHHHHH
Q 002665 490 -HQFSWPEHCKSYLSRIS 506 (895)
Q Consensus 490 -~~~s~~~~a~~~~~~l~ 506 (895)
++|||+.++++|+++|+
T Consensus 675 ~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 675 SARFSLNQMIASTVRCYQ 692 (694)
T ss_pred HHhCCHHHHHHHHHHHhC
Confidence 69999999999999985
No 29
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1.2e-32 Score=309.35 Aligned_cols=360 Identities=18% Similarity=0.209 Sum_probs=257.0
Q ss_pred EEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhhc
Q 002665 8 MKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 87 (895)
Q Consensus 8 ~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 87 (895)
||++|+.+|+ +|..||+++++.+|+++|+++| |+|+|+|.....+.. .
T Consensus 1 ~i~~i~~~~~----------~~~~gG~~~~~~~la~~L~~~g--~~v~v~~~~~~~~~~-------~------------- 48 (363)
T cd04955 1 KIAIIGTRGI----------PAKYGGFETFVEELAPRLVARG--HEVTVYCRSPYPKQK-------E------------- 48 (363)
T ss_pred CeEEEecCcC----------CcccCcHHHHHHHHHHHHHhcC--CCEEEEEccCCCCCc-------c-------------
Confidence 6899998886 6889999999999999999999 999999986321110 0
Q ss_pred ccCCCCCcEEEEecCCCCCccccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHHhc
Q 002665 88 GLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSG 167 (895)
Q Consensus 88 ~~~~~~g~~i~r~~~~~~~~~l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~~~ 167 (895)
...+|+++++++.... .. +..+... +..+...+.. ..++|+||...... ..+..+.+
T Consensus 49 --~~~~~i~~~~~~~~~~-~~---------~~~~~~~----~~~~~~~~~~------~~~~~~i~~~~~~~-~~~~~~~~ 105 (363)
T cd04955 49 --TEYNGVRLIHIPAPEI-GG---------LGTIIYD----ILAILHALFV------KRDIDHVHALGPAI-APFLPLLR 105 (363)
T ss_pred --cccCCceEEEcCCCCc-cc---------hhhhHHH----HHHHHHHHhc------cCCeEEEEecCccH-HHHHHHHH
Confidence 1125888888875431 00 0011111 1111111111 13466666554433 33444555
Q ss_pred cCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHH
Q 002665 168 ALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERK 247 (895)
Q Consensus 168 ~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~ 247 (895)
..++|++++.|+...... .+. ....++.+. .|+..++.+|.|++.|+...+.+...|+.
T Consensus 106 ~~~~~~v~~~h~~~~~~~-------~~~----~~~~~~~~~--~~~~~~~~ad~ii~~s~~~~~~~~~~~~~-------- 164 (363)
T cd04955 106 LKGKKVVVNMDGLEWKRA-------KWG----RPAKRYLKF--GEKLAVKFADRLIADSPGIKEYLKEKYGR-------- 164 (363)
T ss_pred hcCCCEEEEccCcceeec-------ccc----cchhHHHHH--HHHHHHhhccEEEeCCHHHHHHHHHhcCC--------
Confidence 569999999998743210 000 001122222 36677899999999999877766555543
Q ss_pred HHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCCCC
Q 002665 248 LRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDP 327 (895)
Q Consensus 248 l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl~~ 327 (895)
+..+||||+|...+.+.. ....... .++.+.++++||+.+
T Consensus 165 -----------------~~~~i~ngv~~~~~~~~~----------------------~~~~~~~-~~~~~~i~~~G~~~~ 204 (363)
T cd04955 165 -----------------DSTYIPYGADHVVSSEED----------------------EILKKYG-LEPGRYYLLVGRIVP 204 (363)
T ss_pred -----------------CCeeeCCCcChhhcchhh----------------------hhHHhcC-CCCCcEEEEEecccc
Confidence 338999999987664300 0011111 134567899999999
Q ss_pred CCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHH-HcCCCCCEEeCCCCCCCcHHHHHHHhh
Q 002665 328 KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLID-KYDLYGQVAYPKHHKQSDVPDIYRLAA 406 (895)
Q Consensus 328 ~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~-~~~l~~~v~~~g~~~~~el~~ly~~a~ 406 (895)
.||++.+++|+.++.. ...+ +++|+++....+. ..+. .++..++|.|.|+++.+++..+|+.|
T Consensus 205 ~Kg~~~li~a~~~l~~---~~~l-~ivG~~~~~~~~~-----------~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~a- 268 (363)
T cd04955 205 ENNIDDLIEAFSKSNS---GKKL-VIVGNADHNTPYG-----------KLLKEKAAADPRIIFVGPIYDQELLELLRYA- 268 (363)
T ss_pred cCCHHHHHHHHHhhcc---CceE-EEEcCCCCcchHH-----------HHHHHHhCCCCcEEEccccChHHHHHHHHhC-
Confidence 9999999999998842 3333 4778775433322 2222 56778899999999999999999999
Q ss_pred cCCcEEEecCCC-CCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHhhCHHHHHHHHHHH
Q 002665 407 KTKGVFINPAFI-EPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNG 485 (895)
Q Consensus 407 ~~~Dv~v~ps~~-eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~ 485 (895)
|++++||.. |+||++++|||+||+|||+|+.|+..|++.+ +|.++++.|. ++++|.+++++++.+.++++++
T Consensus 269 ---d~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~~--l~~~i~~l~~~~~~~~~~~~~~ 341 (363)
T cd04955 269 ---ALFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGDD--LASLLEELEADPEEVSAMAKAA 341 (363)
T ss_pred ---CEEEeCCccCCCCChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCchH--HHHHHHHHHhCHHHHHHHHHHH
Confidence 999999998 9999999999999999999999999999865 7999987776 9999999999999999999999
Q ss_pred HHHH-hhCCHHHHHHHHHHHHH
Q 002665 486 LKNI-HQFSWPEHCKSYLSRIS 506 (895)
Q Consensus 486 ~~~v-~~~s~~~~a~~~~~~l~ 506 (895)
++.+ ++|||+.++++|+++|+
T Consensus 342 ~~~~~~~fs~~~~~~~~~~~y~ 363 (363)
T cd04955 342 RERIREKYTWEKIADQYEELYK 363 (363)
T ss_pred HHHHHHhCCHHHHHHHHHHHhC
Confidence 9998 57999999999999874
No 30
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=100.00 E-value=1e-32 Score=308.88 Aligned_cols=342 Identities=24% Similarity=0.307 Sum_probs=255.8
Q ss_pred CCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhhcccCCCCCcEEEEecCCCCCcccc
Q 002665 31 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQ 110 (895)
Q Consensus 31 ~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~g~~i~r~~~~~~~~~l~ 110 (895)
.||.++++.+|+++|+++| |+|++++.... ..+.+ ...+++++.++..... .
T Consensus 9 ~gG~e~~~~~l~~~L~~~g--~~v~v~~~~~~----------~~~~~-------------~~~~~~~~~~~~~~~~-~-- 60 (355)
T cd03819 9 SGGVERGTLELARALVERG--HRSLVASAGGR----------LVAEL-------------EAEGSRHIKLPFISKN-P-- 60 (355)
T ss_pred cCcHHHHHHHHHHHHHHcC--CEEEEEcCCCc----------hHHHH-------------HhcCCeEEEccccccc-h--
Confidence 5999999999999999999 99999986411 00001 1136777776653321 0
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHHhccCCCCEEEEeCCCchhhHHHHHH
Q 002665 111 KELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLK 190 (895)
Q Consensus 111 k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~ 190 (895)
+. .+..+..+.+.+.+ .+||+||+|.....+.+.++++..++|+++++|+.+....
T Consensus 61 ----~~--------~~~~~~~l~~~~~~-------~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~----- 116 (355)
T cd03819 61 ----LR--------ILLNVARLRRLIRE-------EKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVNF----- 116 (355)
T ss_pred ----hh--------hHHHHHHHHHHHHH-------cCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhHH-----
Confidence 00 01112222223333 5799999998877777777788889999999998743220
Q ss_pred hCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeC
Q 002665 191 QGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIP 270 (895)
Q Consensus 191 ~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip 270 (895)
+ ....++.+|.+++.|+...+.+...|+. ... ++.+||
T Consensus 117 --------------~------~~~~~~~~~~vi~~s~~~~~~~~~~~~~-~~~---------------------k~~~i~ 154 (355)
T cd03819 117 --------------R------YNAIMARGDRVIAVSNFIADHIRENYGV-DPD---------------------RIRVIP 154 (355)
T ss_pred --------------H------HHHHHHhcCEEEEeCHHHHHHHHHhcCC-Chh---------------------hEEEec
Confidence 1 1223678999999999777665544432 222 899999
Q ss_pred CCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcE
Q 002665 271 PGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANL 350 (895)
Q Consensus 271 ~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l 350 (895)
||+|...|.+..... ......++++...++.++|+++||+...||++.+++++..+.+. .+++
T Consensus 155 ngi~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~--~~~~ 217 (355)
T cd03819 155 RGVDLDRFDPGAVPP---------------ERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALARLKKD--DPDV 217 (355)
T ss_pred CCccccccCccccch---------------HHHHHHHHHcCCCCCceEEEEeeccccccCHHHHHHHHHHHHhc--CCCe
Confidence 999998876432110 00001223334456788999999999999999999999998653 3345
Q ss_pred EE-EEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecC-CCCCCChHHHHH
Q 002665 351 TL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPA-FIEPFGLTLIEA 428 (895)
Q Consensus 351 ~l-ivG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps-~~eg~gl~~~Ea 428 (895)
.+ ++|.++..+. +...+.+.+.++++.++|.|+|+ .+++..+|+.| |++++|| ..|+||++++||
T Consensus 218 ~l~ivG~~~~~~~-------~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~l~~a----d~~i~ps~~~e~~~~~l~EA 284 (355)
T cd03819 218 HLLIVGDAQGRRF-------YYAELLELIKRLGLQDRVTFVGH--CSDMPAAYALA----DIVVSASTEPEAFGRTAVEA 284 (355)
T ss_pred EEEEEECCcccch-------HHHHHHHHHHHcCCcceEEEcCC--cccHHHHHHhC----CEEEecCCCCCCCchHHHHH
Confidence 44 7787765433 23455567788898889999999 68999999999 9999999 799999999999
Q ss_pred HHcCCCEEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHhh-CHHHHHHHHHHHHHHH-hhCCHHH
Q 002665 429 AAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVS-DKQLWERCRQNGLKNI-HQFSWPE 496 (895)
Q Consensus 429 ~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~-~~~~~~~~~~~~~~~v-~~~s~~~ 496 (895)
||||+|||+++.|+..|++.++.+|+++++.|+++++++|..++. +++++.++++++++.+ ++|+|+.
T Consensus 285 ~a~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~~~f~~~~ 354 (355)
T cd03819 285 QAMGRPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVETLFSYDR 354 (355)
T ss_pred HhcCCCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 999999999999999999999889999999999999999976665 8999999999999999 6999975
No 31
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=100.00 E-value=4.1e-34 Score=300.31 Aligned_cols=246 Identities=24% Similarity=0.321 Sum_probs=182.2
Q ss_pred ccEEEEEEecCCCChhhHHHHHHHHHHHh-ccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCceEecCC
Q 002665 609 RKYVFVIAADCDTTSDFLEIIKKVVEAAG-KDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPS 687 (895)
Q Consensus 609 ~~kli~~DiDGTL~~~~~~~~~~~l~~l~-~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~ 687 (895)
+++||++|+||||.......+.++.+.++ .. .+++.|+++|||++.++.+++++.++ +.||++||++|+.|++..
T Consensus 1 ~~~ll~sDlD~Tl~~~~~~~~~~l~~~l~~~~--~~~~~~v~~TGRs~~~~~~~~~~~~l--~~Pd~~I~svGt~I~~~~ 76 (247)
T PF05116_consen 1 PPRLLASDLDGTLIDGDDEALARLEELLEQQA--RPEILFVYVTGRSLESVLRLLREYNL--PQPDYIITSVGTEIYYGE 76 (247)
T ss_dssp -SEEEEEETBTTTBHCHHHHHHHHHHHHHHHH--CCGEEEEEE-SS-HHHHHHHHHHCT---EE-SEEEETTTTEEEESS
T ss_pred CCEEEEEECCCCCcCCCHHHHHHHHHHHHHhh--CCCceEEEECCCCHHHHHHHHHhCCC--CCCCEEEecCCeEEEEcC
Confidence 36899999999997333333333333333 12 25699999999999999999999998 469999999999999953
Q ss_pred CCCCCCCCCCcccCcchhhhhccccCcchHHHHHHHHhhhccCCCCccCcccccccccccceEEEEEecCCCCCcCHHHH
Q 002665 688 SSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMIPPVKEL 767 (895)
Q Consensus 688 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~l 767 (895)
...++..|..++...|..+.+++++.++++...+.. ..+..+|++|++........++++
T Consensus 77 ---------~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~l~~q~~-----------~~q~~~k~sy~~~~~~~~~~~~~i 136 (247)
T PF05116_consen 77 ---------NWQPDEEWQAHIDERWDRERVEEILAELPGLRPQPE-----------SEQRPFKISYYVDPDDSADILEEI 136 (247)
T ss_dssp ---------TTEE-HHHHHHHHTT--HHHHHHHHHCHCCEEEGGC-----------CCGCCTCECEEEETTSHCHHHHHH
T ss_pred ---------CCcChHHHHHHHHhcCChHHHHHHHHHhhCcccCCc-----------cccCCeeEEEEEecccchhHHHHH
Confidence 567889999999999999989888888776544433 567789999998755544446789
Q ss_pred HHHHHhhcCeEEEEEeeCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEEcCchhh
Q 002665 768 RKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGES 847 (895)
Q Consensus 768 ~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaMgNA~~~ 847 (895)
++.+.+.+..+++++|++. ++||+|+++|||.||++|+++|+++++++++ +||++| | ++||..+..||+|+||.
T Consensus 137 ~~~l~~~~l~~~~i~s~~~-~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~-aGDSgN-D-~~mL~~~~~~vvV~Na~-- 210 (247)
T PF05116_consen 137 RARLRQRGLRVNVIYSNGR-DLDILPKGASKGAALRYLMERWGIPPEQVLV-AGDSGN-D-LEMLEGGDHGVVVGNAQ-- 210 (247)
T ss_dssp HHHHHCCTCEEEEEECTCC-EEEEEETT-SHHHHHHHHHHHHT--GGGEEE-EESSGG-G-HHHHCCSSEEEE-TTS---
T ss_pred HHHHHHcCCCeeEEEccce-eEEEccCCCCHHHHHHHHHHHhCCCHHHEEE-EeCCCC-c-HHHHcCcCCEEEEcCCC--
Confidence 9999988999999999885 9999999999999999999999999999999 778888 8 99999999999999999
Q ss_pred hHhhhhcCCCCCCCcccCCCCceEEeccccChHHHHHHHHHhcc
Q 002665 848 ARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGV 891 (895)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~gI~~al~~~~~ 891 (895)
+++..+...- ....+. .|.++...++||.+||+||||
T Consensus 211 ~e~~~~~~~~------~~~~~~-iy~a~~~~a~GIlegl~~~~~ 247 (247)
T PF05116_consen 211 PELLSWLLEK------LRQQER-IYFAQGPYAAGILEGLQHFGF 247 (247)
T ss_dssp HHHHHHHHHC------C-TTE---EE-SS-THHHHHHHHHHTTT
T ss_pred HHHHHHHHHh------cccCCc-eEecCCCCcHHHHHHHHHcCC
Confidence 4422221100 011122 355578889999999999996
No 32
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1.2e-31 Score=311.15 Aligned_cols=293 Identities=22% Similarity=0.285 Sum_probs=232.6
Q ss_pred CCCcEEEeccC-CchHHHHHHhccCCCCEEEEeCCCchhhHH-HHHHhCCCChhhhhhH-hhHHHhHHHHHhhccccCEE
Q 002665 146 IWPVAIHGHYA-DAGDAAALLSGALNVPMVFTGHSLGRDKLE-QLLKQGRLSRDEINTT-YKIMRRIEAEELSLDASEIV 222 (895)
Q Consensus 146 ~~pDvIh~h~~-~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~-~~~~~g~~~~~~~~~~-~~~~~r~~~e~~~~~~ad~v 222 (895)
.++||||+|.. .+++++..+++..++|+|+|.|+....... .+... .+....+... .+++++ .++.+++.||.|
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~-~~~~~~~~~~~~~~~~~--l~~~~~~~ad~I 248 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQA-DWEMSYFRRLWIRFFES--LGRLAYQAADRI 248 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhc-ccchHHHHHHHHHHHHH--HHHHHHHhCCEE
Confidence 36999999975 467778888899999999999998654322 22211 1111111111 123333 367789999999
Q ss_pred EecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCc
Q 002665 223 ITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPP 302 (895)
Q Consensus 223 i~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 302 (895)
++.|+...+.+. .+ +..+. ++.+||||+|.+.|.+....
T Consensus 249 i~~s~~~~~~~~-~~-g~~~~---------------------ki~vIpNgid~~~f~~~~~~------------------ 287 (475)
T cd03813 249 TTLYEGNRERQI-ED-GADPE---------------------KIRVIPNGIDPERFAPARRA------------------ 287 (475)
T ss_pred EecCHHHHHHHH-Hc-CCCHH---------------------HeEEeCCCcCHHHcCCcccc------------------
Confidence 999997665432 23 22333 89999999999988653210
Q ss_pred hhhhhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhhhHHHHHHHHHHHHHc
Q 002665 303 IWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKY 381 (895)
Q Consensus 303 ~~~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~l~~~~~~~~~~i~~~~~~~ 381 (895)
....+.++|+++||+.+.||++.+++|+..+.+. .+++.+ |+|+++.. .++..++.++++++
T Consensus 288 --------~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~p~~~l~IvG~g~~~-------~~~~~e~~~li~~l 350 (475)
T cd03813 288 --------RPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKK--IPDAEGWVIGPTDED-------PEYAEECRELVESL 350 (475)
T ss_pred --------ccCCCCcEEEEEeccccccCHHHHHHHHHHHHHh--CCCeEEEEECCCCcC-------hHHHHHHHHHHHHh
Confidence 0134678999999999999999999999998654 345554 77877532 23457788899999
Q ss_pred CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccc------CCceEE
Q 002665 382 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRV------LDNGLL 455 (895)
Q Consensus 382 ~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~------~~~g~l 455 (895)
++.++|.|+| .+++..+|+.| |++|+||..|++|++++||||||+|||+|+.|+.+|++.+ +.+|++
T Consensus 351 ~l~~~V~f~G---~~~v~~~l~~a----Dv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~l 423 (475)
T cd03813 351 GLEDNVKFTG---FQNVKEYLPKL----DVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEV 423 (475)
T ss_pred CCCCeEEEcC---CccHHHHHHhC----CEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEE
Confidence 9999999999 58999999999 9999999999999999999999999999999999999988 568999
Q ss_pred eCCCCHHHHHHHHHHHhhCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHHHH
Q 002665 456 VDPHDQQSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRIS 506 (895)
Q Consensus 456 v~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~v-~~~s~~~~a~~~~~~l~ 506 (895)
++|.|+++++++|.++++|++.++++++++++++ +.|+|+.++++|.++|+
T Consensus 424 v~~~d~~~la~ai~~ll~~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 424 VPPADPEALARAILRLLKDPELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred ECCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999 58999999999999873
No 33
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=100.00 E-value=1e-32 Score=310.58 Aligned_cols=278 Identities=26% Similarity=0.380 Sum_probs=224.0
Q ss_pred CCCcEEEeccCCchHHHHHHhccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEec
Q 002665 146 IWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITS 225 (895)
Q Consensus 146 ~~pDvIh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~ 225 (895)
.+||+||+|....+..+..+++..|+|+|++.|+............ . .++..+. .+...++.+|.+++.
T Consensus 81 ~~~dvvh~~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~---~------~~~~~~~--~~~~~~~~~d~ii~~ 149 (367)
T cd05844 81 HRPDLVHAHFGFDGVYALPLARRLGVPLVVTFHGFDATTSLALLLR---S------RWALYAR--RRRRLARRAALFIAV 149 (367)
T ss_pred hCCCEEEeccCchHHHHHHHHHHcCCCEEEEEeCccccccchhhcc---c------chhHHHH--HHHHHHHhcCEEEEC
Confidence 5799999998777888888889999999999997643221111000 0 0111222 355678999999999
Q ss_pred CHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhh
Q 002665 226 TRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWS 305 (895)
Q Consensus 226 s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (895)
|+...+.+... +..+. ++.++|||+|.+.|.+..
T Consensus 150 s~~~~~~~~~~--~~~~~---------------------~i~vi~~g~d~~~~~~~~----------------------- 183 (367)
T cd05844 150 SQFIRDRLLAL--GFPPE---------------------KVHVHPIGVDTAKFTPAT----------------------- 183 (367)
T ss_pred CHHHHHHHHHc--CCCHH---------------------HeEEecCCCCHHhcCCCC-----------------------
Confidence 99777655432 22222 899999999998775432
Q ss_pred hhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhhhHHHHHHHHHHHHHcCCC
Q 002665 306 EIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLY 384 (895)
Q Consensus 306 ~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~ 384 (895)
...+.+.++++|++.+.||++.+++|+..+.+..+ ++.+ ++|+++. ...+...++++++.
T Consensus 184 ------~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~--~~~l~ivG~g~~-----------~~~~~~~~~~~~~~ 244 (367)
T cd05844 184 ------PARRPPRILFVGRFVEKKGPLLLLEAFARLARRVP--EVRLVIIGDGPL-----------LAALEALARALGLG 244 (367)
T ss_pred ------CCCCCcEEEEEEeeccccChHHHHHHHHHHHHhCC--CeEEEEEeCchH-----------HHHHHHHHHHcCCC
Confidence 02356789999999999999999999999865433 4444 7787642 24566778888888
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCC------CCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCC
Q 002665 385 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAF------IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDP 458 (895)
Q Consensus 385 ~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~------~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p 458 (895)
++|.|.|+++.+++..+|+.| |++++||. .||||++++|||+||+|||+++.|+..|++.++.+|+++++
T Consensus 245 ~~v~~~g~~~~~~l~~~~~~a----d~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~~ 320 (367)
T cd05844 245 GRVTFLGAQPHAEVRELMRRA----RIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPE 320 (367)
T ss_pred CeEEECCCCCHHHHHHHHHhC----CEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEECC
Confidence 999999999999999999999 99999996 59999999999999999999999999999999899999999
Q ss_pred CCHHHHHHHHHHHhhCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHH
Q 002665 459 HDQQSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLS 503 (895)
Q Consensus 459 ~d~~~la~ai~~ll~~~~~~~~~~~~~~~~v-~~~s~~~~a~~~~~ 503 (895)
.|+++++++|.+++++++.++++++++++.+ ++|||+.+++++.+
T Consensus 321 ~d~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 321 GDVAALAAALGRLLADPDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 9999999999999999999999999999999 69999999998865
No 34
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=4.5e-32 Score=304.07 Aligned_cols=304 Identities=15% Similarity=0.114 Sum_probs=219.0
Q ss_pred HHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHHhccCCCCEEEE-eCCCchhhHHHHHHhCCCChhhhhhHhh
Q 002665 126 LTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFT-GHSLGRDKLEQLLKQGRLSRDEINTTYK 204 (895)
Q Consensus 126 ~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~~~~~~ip~v~t-~H~~~~~~~~~~~~~g~~~~~~~~~~~~ 204 (895)
..-+..+...+++ .+|||||+|...+...+...+...++|++++ .|++......++ +...+.
T Consensus 266 ~~~~~~l~~~ir~-------~rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~~~~~~~~r~----------~~~e~~ 328 (578)
T PRK15490 266 KYGIKHLVPHLCE-------RKLDYLSVWQDGACLMIALAALIAGVPRIQLGLRGLPPVVRKRL----------FKPEYE 328 (578)
T ss_pred HHHHHHHHHHHHH-------cCCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecccCCcchhhH----------HHHHHH
Confidence 3444455555555 6899999998777677777777789999665 665322211110 001111
Q ss_pred HHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCC
Q 002665 205 IMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGD 284 (895)
Q Consensus 205 ~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~ 284 (895)
..++ ...+...+| +++.+....+.+...+ ...+. ++.+||||||+..|.+....
T Consensus 329 ~~~~---a~~i~~~sd-~v~~s~~v~~~l~~~l-gip~~---------------------KI~VIyNGVD~~rf~p~~~~ 382 (578)
T PRK15490 329 PLYQ---ALAVVPGVD-FMSNNHCVTRHYADWL-KLEAK---------------------HFQVVYNGVLPPSTEPSSEV 382 (578)
T ss_pred Hhhh---hceeEecch-hhhccHHHHHHHHHHh-CCCHH---------------------HEEEEeCCcchhhcCccchh
Confidence 1110 011233444 5566665545443333 23443 89999999999988764311
Q ss_pred CCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCchhh
Q 002665 285 VDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDDIDEM 363 (895)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~-livG~~~~~~~l 363 (895)
. ...+... ....+++.++|+++||+.+.||+..+++++.++.+.. +++. +++|+++..
T Consensus 383 ~---------------~~~r~~~-~~~l~~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~--pdirLvIVGdG~~~--- 441 (578)
T PRK15490 383 P---------------HKIWQQF-TQKTQDADTTIGGVFRFVGDKNPFAWIDFAARYLQHH--PATRFVLVGDGDLR--- 441 (578)
T ss_pred h---------------HHHHHHh-hhccCCCCcEEEEEEEEehhcCHHHHHHHHHHHHhHC--CCeEEEEEeCchhH---
Confidence 0 0011111 1112355689999999999999999999999876434 4454 478887642
Q ss_pred hhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCc
Q 002665 364 SGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGP 443 (895)
Q Consensus 364 ~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~ 443 (895)
.++...++++++.++|.|.|+ .+++..+|+.+ |+||+||..||||++++||||||+|||+|+.||.
T Consensus 442 --------eeLk~la~elgL~d~V~FlG~--~~Dv~~~LaaA----DVfVlPS~~EGfp~vlLEAMA~GlPVVATdvGG~ 507 (578)
T PRK15490 442 --------AEAQKRAEQLGILERILFVGA--SRDVGYWLQKM----NVFILFSRYEGLPNVLIEAQMVGVPVISTPAGGS 507 (578)
T ss_pred --------HHHHHHHHHcCCCCcEEECCC--hhhHHHHHHhC----CEEEEcccccCccHHHHHHHHhCCCEEEeCCCCc
Confidence 456678889999999999998 47899999999 9999999999999999999999999999999999
Q ss_pred ccccccCCceEEeCCCCHHHHHHHH---HHHhhCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHHHHH
Q 002665 444 VDIHRVLDNGLLVDPHDQQSIADAL---LKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRISS 507 (895)
Q Consensus 444 ~eiv~~~~~g~lv~p~d~~~la~ai---~~ll~~~~~~~~~~~~~~~~v-~~~s~~~~a~~~~~~l~~ 507 (895)
.|++.++.+|+++++.|++++++++ ..+....+.+..+++++++++ ++|||+.++++|.+.|++
T Consensus 508 ~EiV~dG~nG~LVp~~D~~aLa~ai~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 508 AECFIEGVSGFILDDAQTVNLDQACRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHHcccCCcEEEECCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 9999999999999999999988887 334445555667889999999 699999999999999974
No 35
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=100.00 E-value=1.1e-32 Score=311.14 Aligned_cols=286 Identities=19% Similarity=0.242 Sum_probs=208.0
Q ss_pred CCCcEEEeccCCchHHHHHHhccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEec
Q 002665 146 IWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITS 225 (895)
Q Consensus 146 ~~pDvIh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~ 225 (895)
.+|||||+|.+.+..+ ....+..++|+|++.|+...... ...+++. +..++.+|.+++.
T Consensus 84 ~~~Dvv~~h~~~~~~~-~~~~~~~~~~~i~~~H~~~~~~~--------------~~~~~~~------~~~~~~~d~~i~~ 142 (372)
T cd03792 84 LDADVVVIHDPQPLAL-PLFKKKRGRPWIWRCHIDLSSPN--------------RRVWDFL------QPYIEDYDAAVFH 142 (372)
T ss_pred CCCCEEEECCCCchhH-HHhhhcCCCeEEEEeeeecCCCc--------------HHHHHHH------HHHHHhCCEEeec
Confidence 4699999998764322 22333348999999997532110 1111122 2346789999888
Q ss_pred CHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhh
Q 002665 226 TRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWS 305 (895)
Q Consensus 226 s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (895)
+.+.... ...+ +..+||||||+....... . .......
T Consensus 143 ~~~~~~~------~~~~----------------------~~~vipngvd~~~~~~~~--~-------------~~~~~~~ 179 (372)
T cd03792 143 LPEYVPP------QVPP----------------------RKVIIPPSIDPLSGKNRE--L-------------SPADIEY 179 (372)
T ss_pred HHHhcCC------CCCC----------------------ceEEeCCCCCCCccccCC--C-------------CHHHHHH
Confidence 8432211 1111 333999999975321110 0 0001112
Q ss_pred hhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCC
Q 002665 306 EIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYG 385 (895)
Q Consensus 306 ~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~ 385 (895)
.+.+++..+++++|+++||+.+.||++.+++|+..+.+..+...+ +++|+++..+... ...+..+.+..+..+
T Consensus 180 ~~~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l-~i~G~g~~~~~~~------~~~~~~~~~~~~~~~ 252 (372)
T cd03792 180 ILEKYGIDPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQL-VLVGSGATDDPEG------WIVYEEVLEYAEGDP 252 (372)
T ss_pred HHHHhCCCCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCEE-EEEeCCCCCCchh------HHHHHHHHHHhCCCC
Confidence 334556667889999999999999999999999998654444444 4778775422111 112233344566777
Q ss_pred CEEeCCCC--CCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCHHH
Q 002665 386 QVAYPKHH--KQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQS 463 (895)
Q Consensus 386 ~v~~~g~~--~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~ 463 (895)
++.|.+.. +.+++.++|+.| |+|++||..||||++++||||||+|||+++.||..+++.++.+|++++ +.++
T Consensus 253 ~v~~~~~~~~~~~~~~~~~~~a----d~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~--~~~~ 326 (372)
T cd03792 253 DIHVLTLPPVSDLEVNALQRAS----TVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVD--TVEE 326 (372)
T ss_pred CeEEEecCCCCHHHHHHHHHhC----eEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEeC--CcHH
Confidence 89998876 788999999999 999999999999999999999999999999999999999999999987 5678
Q ss_pred HHHHHHHHhhCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHHHHHh
Q 002665 464 IADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRISSC 508 (895)
Q Consensus 464 la~ai~~ll~~~~~~~~~~~~~~~~v-~~~s~~~~a~~~~~~l~~~ 508 (895)
++.+|.++++++++++++++++++.+ ++|+|+..+++|+++|+.+
T Consensus 327 ~a~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~ 372 (372)
T cd03792 327 AAVRILYLLRDPELRRKMGANAREHVRENFLITRHLKDYLYLISKL 372 (372)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHhC
Confidence 89999999999999999999999998 6999999999999999863
No 36
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=9.6e-32 Score=300.98 Aligned_cols=362 Identities=21% Similarity=0.239 Sum_probs=261.1
Q ss_pred EEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhhc
Q 002665 8 MKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 87 (895)
Q Consensus 8 ~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 87 (895)
||++|+.... |..||.+.++.+|+++|+++| |+|+++|.....+....
T Consensus 1 kIl~i~~~~~-----------p~~~G~~~~~~~l~~~L~~~g--~~v~~~~~~~~~~~~~~------------------- 48 (364)
T cd03814 1 RIAIVTDTFL-----------PQVNGVVRTLQRLVEHLRARG--HEVLVIAPGPFRESEGP------------------- 48 (364)
T ss_pred CeEEEecccC-----------ccccceehHHHHHHHHHHHCC--CEEEEEeCCchhhccCC-------------------
Confidence 6888886553 778999999999999999999 99999998632111000
Q ss_pred ccCCCCCcEEEEecCCCCCccccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccC-CchHHHHHHh
Q 002665 88 GLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYA-DAGDAAALLS 166 (895)
Q Consensus 88 ~~~~~~g~~i~r~~~~~~~~~l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~-~~~~~~~~~~ 166 (895)
.....+...+.... ... ... + .....+.+.+ .+ .+||+||++.. ..+..+..++
T Consensus 49 ----~~~~~~~~~~~~~~-~~~---~~~--~-~~~~~~~~~~-------~~-------~~pdii~~~~~~~~~~~~~~~~ 103 (364)
T cd03814 49 ----ARVVPVPSVPLPGY-PEI---RLA--L-PPRRRVRRLL-------DA-------FAPDVVHIATPGPLGLAALRAA 103 (364)
T ss_pred ----CCceeecccccCcc-cce---Eec--c-cchhhHHHHH-------Hh-------cCCCEEEEeccchhhHHHHHHH
Confidence 01222222222111 000 000 0 0001111111 11 57999999865 3456677778
Q ss_pred ccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHH
Q 002665 167 GALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 246 (895)
Q Consensus 167 ~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~ 246 (895)
+..++|++++.|+.++....... . ... ..+..+ .++..++.+|.+++.|+...+.+...+.
T Consensus 104 ~~~~~~~i~~~~~~~~~~~~~~~-----~-~~~---~~~~~~--~~~~~~~~~d~i~~~s~~~~~~~~~~~~-------- 164 (364)
T cd03814 104 RRLGIPVVTSYHTDFPEYLRYYG-----L-GPL---SWLAWA--YLRWFHNRADRVLVPSPSLADELRARGF-------- 164 (364)
T ss_pred HHcCCCEEEEEecChHHHhhhcc-----c-chH---hHhhHH--HHHHHHHhCCEEEeCCHHHHHHHhccCC--------
Confidence 88899999999987663322111 0 001 111111 2455688999999999977663322111
Q ss_pred HHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCCC
Q 002665 247 KLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPD 326 (895)
Q Consensus 247 ~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl~ 326 (895)
.++.++|+|+|...|.+..... .....+. ..+.+.|+++||+.
T Consensus 165 -----------------~~~~~~~~g~~~~~~~~~~~~~-------------------~~~~~~~-~~~~~~i~~~G~~~ 207 (364)
T cd03814 165 -----------------RRVRLWPRGVDTELFHPRRRDE-------------------ALRARLG-PPDRPVLLYVGRLA 207 (364)
T ss_pred -----------------CceeecCCCccccccCcccccH-------------------HHHHHhC-CCCCeEEEEEeccc
Confidence 1789999999998886532110 1111222 35678999999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHh
Q 002665 327 PKKNITTLVKAFGECRPLRELANLT-LIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLA 405 (895)
Q Consensus 327 ~~Kgi~~ll~A~~~l~~~~~~~~l~-livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a 405 (895)
..||++.+++++..+... +++. +++|.++....+ . +..++|.|.|+++.+++..+|+.|
T Consensus 208 ~~k~~~~~i~~~~~l~~~---~~~~l~i~G~~~~~~~~-----------~------~~~~~v~~~g~~~~~~~~~~~~~~ 267 (364)
T cd03814 208 PEKNLEALLDADLPLRRR---PPVRLVIVGDGPARARL-----------E------ARYPNVHFLGFLDGEELAAAYASA 267 (364)
T ss_pred cccCHHHHHHHHHHhhhc---CCceEEEEeCCchHHHH-----------h------ccCCcEEEEeccCHHHHHHHHHhC
Confidence 999999999999999653 3444 477877643221 1 455789999999999999999999
Q ss_pred hcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHhhCHHHHHHHHHHH
Q 002665 406 AKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNG 485 (895)
Q Consensus 406 ~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~ 485 (895)
|++++|+..|++|++++||||||+|||+++.|+..|++.++.+|+++++.|.++++++|.+++++++.++++.+++
T Consensus 268 ----d~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~ 343 (364)
T cd03814 268 ----DVFVFPSRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLADPELRRRMAARA 343 (364)
T ss_pred ----CEEEECcccccCCcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred HHHHhhCCHHHHHHHHHHHHH
Q 002665 486 LKNIHQFSWPEHCKSYLSRIS 506 (895)
Q Consensus 486 ~~~v~~~s~~~~a~~~~~~l~ 506 (895)
++.+++|+|+.+++++++.|+
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~ 364 (364)
T cd03814 344 RAEAERRSWEAFLDNLLEAYR 364 (364)
T ss_pred HHHHhhcCHHHHHHHHHHhhC
Confidence 999999999999999998873
No 37
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=3.4e-31 Score=296.57 Aligned_cols=353 Identities=21% Similarity=0.239 Sum_probs=254.9
Q ss_pred EEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhhc
Q 002665 8 MKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 87 (895)
Q Consensus 8 ~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 87 (895)
||++|+.... |+.||.++++.+|+++|.++| |+|++++........ ..
T Consensus 1 kil~i~~~~~-----------p~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~-------~~------------ 48 (357)
T cd03795 1 RVLHVGKFYP-----------PDRGGIEQVIRDLAEGLAARG--IEVAVLCASPEPKGR-------DE------------ 48 (357)
T ss_pred CeeEecCCCC-----------CCCCcHHHHHHHHHHHHHhCC--CceEEEecCCCCcch-------hh------------
Confidence 6888885553 889999999999999999998 999999986321110 00
Q ss_pred ccCCCCCcEEEEecCCCCCccccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHHhc
Q 002665 88 GLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSG 167 (895)
Q Consensus 88 ~~~~~~g~~i~r~~~~~~~~~l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~~~ 167 (895)
...+..+++++.... ....+.. ..++..+. +. ..+||+||+|.............
T Consensus 49 ---~~~~~~~~~~~~~~~------~~~~~~~----~~~~~~~~-----~~-------~~~~Dii~~~~~~~~~~~~~~~~ 103 (357)
T cd03795 49 ---ERNGHRVIRAPSLLN------VASTPFS----PSFFKQLK-----KL-------AKKADVIHLHFPNPLADLALLLL 103 (357)
T ss_pred ---hccCceEEEeecccc------ccccccc----HHHHHHHH-----hc-------CCCCCEEEEecCcchHHHHHHHh
Confidence 113556666654221 0111111 11111111 11 15699999998644333333333
Q ss_pred cCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHH
Q 002665 168 ALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERK 247 (895)
Q Consensus 168 ~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~ 247 (895)
..++|+++++|+..... . ....+... .+...++.||.+++.|+...+.....+.. .
T Consensus 104 ~~~~~~i~~~h~~~~~~-------~--------~~~~~~~~--~~~~~~~~~d~vi~~s~~~~~~~~~~~~~-~------ 159 (357)
T cd03795 104 PRKKPVVVHWHSDIVKQ-------K--------LLLKLYRP--LQRRFLRRADAIVATSPNYAETSPVLRRF-R------ 159 (357)
T ss_pred ccCceEEEEEcChhhcc-------c--------hhhhhhhH--HHHHHHHhcCEEEeCcHHHHHHHHHhcCC-c------
Confidence 36899999999742211 0 01112222 24557899999999999877654433321 1
Q ss_pred HHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCCCC
Q 002665 248 LRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDP 327 (895)
Q Consensus 248 l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl~~ 327 (895)
.++.++|||+|...+.+..... ........+.++|+++||+.+
T Consensus 160 ----------------~~~~~i~~gi~~~~~~~~~~~~---------------------~~~~~~~~~~~~i~~~G~~~~ 202 (357)
T cd03795 160 ----------------DKVRVIPLGLDPARYPRPDALE---------------------EAIWRRAAGRPFFLFVGRLVY 202 (357)
T ss_pred ----------------cceEEecCCCChhhcCCcchhh---------------------hHhhcCCCCCcEEEEeccccc
Confidence 1899999999998776432100 011122356789999999999
Q ss_pred CCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhc
Q 002665 328 KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAK 407 (895)
Q Consensus 328 ~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~ 407 (895)
.||++.+++|+.++. ...+ +++|+++.. ..+.+.+.+++..++|.|.|+++.+++..+|+.|
T Consensus 203 ~K~~~~li~a~~~l~----~~~l-~i~G~g~~~-----------~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~a-- 264 (357)
T cd03795 203 YKGLDVLLEAAAALP----DAPL-VIVGEGPLE-----------AELEALAAALGLLDRVRFLGRLDDEEKAALLAAC-- 264 (357)
T ss_pred ccCHHHHHHHHHhcc----CcEE-EEEeCChhH-----------HHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhC--
Confidence 999999999999884 2233 477877642 3444666788899999999999999999999999
Q ss_pred CCcEEEecCC--CCCCChHHHHHHHcCCCEEEcCCCCccccccc-CCceEEeCCCCHHHHHHHHHHHhhCHHHHHHHHHH
Q 002665 408 TKGVFINPAF--IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRV-LDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQN 484 (895)
Q Consensus 408 ~~Dv~v~ps~--~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~-~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~ 484 (895)
|++++||. .|++|++++|||+||+|||+++.|+..+.+.+ +.+|++++++|+++++++|.++++++++++.++++
T Consensus 265 --d~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~~~~~~~~~~~ 342 (357)
T cd03795 265 --DVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLEDPELRERLGEA 342 (357)
T ss_pred --CEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHCHHHHHHHHHH
Confidence 99999986 59999999999999999999999999998876 88999999999999999999999999999999999
Q ss_pred HHHHH-hhCCHHHHH
Q 002665 485 GLKNI-HQFSWPEHC 498 (895)
Q Consensus 485 ~~~~v-~~~s~~~~a 498 (895)
+++.+ ++|||+.++
T Consensus 343 ~~~~~~~~~s~~~~~ 357 (357)
T cd03795 343 ARERAEEEFTADRMV 357 (357)
T ss_pred HHHHHHHhcchHhhC
Confidence 99999 699998763
No 38
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=100.00 E-value=3e-31 Score=298.80 Aligned_cols=385 Identities=20% Similarity=0.256 Sum_probs=270.4
Q ss_pred EEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhhc
Q 002665 8 MKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 87 (895)
Q Consensus 8 ~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 87 (895)
||++|+.+.. |..||.+.++..++++|+++| |+|++++.....+........
T Consensus 1 kIl~i~~~~~-----------~~~~G~~~~~~~l~~~L~~~g--~~v~~~~~~~~~~~~~~~~~~--------------- 52 (394)
T cd03794 1 KILILSQYFP-----------PELGGGAFRTTELAEELVKRG--HEVTVITGSPNYPSGKIYKGY--------------- 52 (394)
T ss_pred CEEEEecccC-----------CccCCcceeHHHHHHHHHhCC--ceEEEEecCCCcccccccccc---------------
Confidence 6888886553 566999999999999999999 999999976432211100000
Q ss_pred ccCCCCCcEEEEecCCCCCccccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccC--CchHHHHHH
Q 002665 88 GLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYA--DAGDAAALL 165 (895)
Q Consensus 88 ~~~~~~g~~i~r~~~~~~~~~l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~--~~~~~~~~~ 165 (895)
.....+++++++++..... . ......+..+ ..+.......+.. +..+||+||++.+ .....+..+
T Consensus 53 ~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~----~~~~~~~~~~~~~-----~~~~~D~v~~~~~~~~~~~~~~~~ 119 (394)
T cd03794 53 KREEVDGVRVHRVPLPPYK-K---NGLLKRLLNY----LSFALSALLALLK-----RRRRPDVIIATSPPLLIALAALLL 119 (394)
T ss_pred eEEecCCeEEEEEecCCCC-c---cchHHHHHhh----hHHHHHHHHHHHh-----cccCCCEEEEcCChHHHHHHHHHH
Confidence 0011257888888765431 1 0000001111 1111111111110 1156999999973 345566677
Q ss_pred hccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHH
Q 002665 166 SGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 245 (895)
Q Consensus 166 ~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~ 245 (895)
++..++|++++.|++++....... ..... ...+++.++ .++..++.+|.+++.|+...+.+. .+.. ..
T Consensus 120 ~~~~~~~~i~~~h~~~~~~~~~~~---~~~~~--~~~~~~~~~--~~~~~~~~~d~vi~~s~~~~~~~~-~~~~-~~--- 187 (394)
T cd03794 120 ARLKGAPFVLEVRDLWPESAVALG---LLKNG--SLLYRLLRK--LERLIYRRADAIVVISPGMREYLV-RRGV-PP--- 187 (394)
T ss_pred HHhcCCCEEEEehhhcchhHHHcc---Ccccc--chHHHHHHH--HHHHHHhcCCEEEEECHHHHHHHH-hcCC-Cc---
Confidence 777799999999998765543221 11111 011123333 367789999999999998776654 2221 11
Q ss_pred HHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCC
Q 002665 246 RKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARP 325 (895)
Q Consensus 246 ~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl 325 (895)
.++.++|||+|...+.+..... .........+++.|+++|++
T Consensus 188 ------------------~~~~~i~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~i~~~G~~ 229 (394)
T cd03794 188 ------------------EKISVIPNGVDLELFKPPPADE--------------------SLRKELGLDDKFVVLYAGNI 229 (394)
T ss_pred ------------------CceEEcCCCCCHHHcCCccchh--------------------hhhhccCCCCcEEEEEecCc
Confidence 2899999999988765432110 01122234567899999999
Q ss_pred CCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHH
Q 002665 326 DPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRL 404 (895)
Q Consensus 326 ~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~ 404 (895)
...||++.+++|+..+.+. +++.+ ++|.++..+.+ ...+...++ +++.+.|+++.+++..+|+.
T Consensus 230 ~~~k~~~~l~~~~~~l~~~---~~~~l~i~G~~~~~~~~-----------~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~ 294 (394)
T cd03794 230 GRAQGLDTLLEAAALLKDR---PDIRFLIVGDGPEKEEL-----------KELAKALGL-DNVTFLGRVPKEELPELLAA 294 (394)
T ss_pred ccccCHHHHHHHHHHHhhc---CCeEEEEeCCcccHHHH-----------HHHHHHcCC-CcEEEeCCCChHHHHHHHHh
Confidence 9999999999999998653 34444 67877654332 233444444 57999999999999999999
Q ss_pred hhcCCcEEEecCCCCCC-----ChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHhhCHHHHH
Q 002665 405 AAKTKGVFINPAFIEPF-----GLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWE 479 (895)
Q Consensus 405 a~~~~Dv~v~ps~~eg~-----gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~ 479 (895)
| |++++|+..|++ +++++|||+||+|||+++.++..+++.++.+|+++++.|+++++++|.++++++++++
T Consensus 295 ~----di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~ 370 (394)
T cd03794 295 A----DVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDDPEERA 370 (394)
T ss_pred h----CeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHHhChHHHH
Confidence 9 999999998865 7889999999999999999999999988889999999999999999999999999999
Q ss_pred HHHHHHHHHHh-hCCHHHHHHHHH
Q 002665 480 RCRQNGLKNIH-QFSWPEHCKSYL 502 (895)
Q Consensus 480 ~~~~~~~~~v~-~~s~~~~a~~~~ 502 (895)
++++++++.++ +|||+.++++|+
T Consensus 371 ~~~~~~~~~~~~~~s~~~~~~~~~ 394 (394)
T cd03794 371 EMGENGRRYVEEKFSREKLAERLL 394 (394)
T ss_pred HHHHHHHHHHHHhhcHHHHHHhcC
Confidence 99999999995 999999998863
No 39
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=2.2e-31 Score=302.94 Aligned_cols=284 Identities=19% Similarity=0.200 Sum_probs=205.8
Q ss_pred CCCcEEEeccCCchHHHHHHh-ccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhH--HHhHHHHHhhccccCEE
Q 002665 146 IWPVAIHGHYADAGDAAALLS-GALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKI--MRRIEAEELSLDASEIV 222 (895)
Q Consensus 146 ~~pDvIh~h~~~~~~~~~~~~-~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~r~~~e~~~~~~ad~v 222 (895)
.++|+||++....+. .+. ...++|+|++.|+.....+..+.....+... ..++. ......|+..++.+|.+
T Consensus 103 ~~~D~v~~~~~~~~~---~~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~e~~~~~~ad~v 176 (397)
T TIGR03087 103 EPVDAIVVFSSAMAQ---YVTPHVRGVPRIVDFVDVDSDKWLQYARTKRWPLR---WIYRREGRLLLAYERAIAARFDAA 176 (397)
T ss_pred CCCCEEEEeccccce---eccccccCCCeEeehhhHHHHHHHHHHhccCcchh---HHHHHHHHHHHHHHHHHHhhCCeE
Confidence 569999998753322 222 3458999999999866554444322221111 12211 11113488899999999
Q ss_pred EecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCc
Q 002665 223 ITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPP 302 (895)
Q Consensus 223 i~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 302 (895)
+++|+.+.+.+.+.+.. .+ .++.+||||+|.+.|.+.....
T Consensus 177 i~~S~~~~~~l~~~~~~-~~---------------------~~v~vipngvd~~~f~~~~~~~----------------- 217 (397)
T TIGR03087 177 TFVSRAEAELFRRLAPE-AA---------------------GRITAFPNGVDADFFSPDRDYP----------------- 217 (397)
T ss_pred EEcCHHHHHHHHHhCCC-CC---------------------CCeEEeecccchhhcCCCcccc-----------------
Confidence 99999888766544322 11 1899999999999886532110
Q ss_pred hhhhhhhccCCCCCcEEEEEeCCCCCCCHHHHHH----HHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHH
Q 002665 303 IWSEIMHFFSNPRKPMILALARPDPKKNITTLVK----AFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLI 378 (895)
Q Consensus 303 ~~~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~----A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~ 378 (895)
.. ..+++++|+|+||+++.||++.++. ++..+.+..++..+ +|+|+++.. .+
T Consensus 218 -----~~--~~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l-~ivG~g~~~----------------~~ 273 (397)
T TIGR03087 218 -----NP--YPPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEF-YIVGAKPSP----------------AV 273 (397)
T ss_pred -----CC--CCCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEE-EEECCCChH----------------HH
Confidence 00 1245689999999999999999884 45555433333333 477877631 12
Q ss_pred HHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCC-CCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeC
Q 002665 379 DKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAF-IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVD 457 (895)
Q Consensus 379 ~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~-~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~ 457 (895)
.++...++|.|.|+++ ++..+|+.| |++|+|+. .||++++++||||||+|||+|+.++. .+....++|+++.
T Consensus 274 ~~l~~~~~V~~~G~v~--~~~~~~~~a----dv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~~~~g~lv~ 346 (397)
T TIGR03087 274 RALAALPGVTVTGSVA--DVRPYLAHA----AVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAE-GIDALPGAELLVA 346 (397)
T ss_pred HHhccCCCeEEeeecC--CHHHHHHhC----CEEEecccccCCcccHHHHHHHcCCCEEecCcccc-cccccCCcceEeC
Confidence 2334456799999985 799999999 99999997 69999999999999999999997542 3333445788885
Q ss_pred CCCHHHHHHHHHHHhhCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHHHH
Q 002665 458 PHDQQSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRIS 506 (895)
Q Consensus 458 p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~v-~~~s~~~~a~~~~~~l~ 506 (895)
.|+++++++|.++++|++.++++++++++++ ++|||+..++++.++|+
T Consensus 347 -~~~~~la~ai~~ll~~~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 347 -ADPADFAAAILALLANPAEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred -CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 8999999999999999999999999999999 69999999999998875
No 40
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=100.00 E-value=4.7e-31 Score=301.04 Aligned_cols=380 Identities=15% Similarity=0.106 Sum_probs=246.9
Q ss_pred CchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhhcccCCCCCcEEEEecCCCCCccccc
Q 002665 32 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQK 111 (895)
Q Consensus 32 GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~g~~i~r~~~~~~~~~l~k 111 (895)
+|.+.++.+++++|+++| |+|+|+|.....+. .+ .....|+++++++..+. ....
T Consensus 14 ~~~~~R~~~~a~~L~~~G--~~V~ii~~~~~~~~--------~~-------------~~~~~~v~~~~~~~~~~--~~~~ 68 (415)
T cd03816 14 IGRSPRMQYHALSLAKHG--WKVDLVGYLETPPH--------DE-------------ILSNPNITIHPLPPPPQ--RLNK 68 (415)
T ss_pred cCCCHHHHHHHHHHHhcC--ceEEEEEecCCCCC--------HH-------------HhcCCCEEEEECCCCcc--cccc
Confidence 455667788999999999 99999987522110 00 01125888888876531 0000
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCc---hHHHHHHhccCCCCEEEEeCCCchhhHHHH
Q 002665 112 ELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADA---GDAAALLSGALNVPMVFTGHSLGRDKLEQL 188 (895)
Q Consensus 112 ~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~---~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~ 188 (895)
.+++..+...+......+...+... .+||+||+|..+. ..++..+++..++|+|++.|+.+....
T Consensus 69 ---~~~~~~~~~~~~~~~~~~~~~l~~~------~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~~--- 136 (415)
T cd03816 69 ---LPFLLFAPLKVLWQFFSLLWLLYKL------RPADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTIL--- 136 (415)
T ss_pred ---chHHHHHHHHHHHHHHHHHHHHHhc------CCCCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHHH---
Confidence 1111112122222222222222221 4699999987432 334555677789999999999754221
Q ss_pred HHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEE
Q 002665 189 LKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVV 268 (895)
Q Consensus 189 ~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~v 268 (895)
..+.... ....++.+++ |+..++.||.||++|+...+.+.+ ++. .+ .++.|
T Consensus 137 -~~~~~~~---~~~~~~~~~~--e~~~~~~ad~ii~vS~~~~~~l~~-~~~-~~---------------------~ki~v 187 (415)
T cd03816 137 -ALKLGEN---HPLVRLAKWY--EKLFGRLADYNLCVTKAMKEDLQQ-FNN-WK---------------------IRATV 187 (415)
T ss_pred -hcccCCC---CHHHHHHHHH--HHHHhhcCCEeeecCHHHHHHHHh-hhc-cC---------------------CCeee
Confidence 1111111 1122334443 777889999999999987776544 322 22 28999
Q ss_pred eCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhccccc---
Q 002665 269 IPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLR--- 345 (895)
Q Consensus 269 ip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~--- 345 (895)
||||. ...|.|........ .......................++.++++++||+.+.||++.+++|+..+.+..
T Consensus 188 I~Ng~-~~~f~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~ 264 (415)
T cd03816 188 LYDRP-PEQFRPLPLEEKHE--LFLKLAKTFLTRELRIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEKSAATG 264 (415)
T ss_pred cCCCC-HHHceeCcHHHHHH--HHHhccccccccccccccceecCCCceEEEEeccccCCCCHHHHHHHHHHHHHhhccc
Confidence 99994 45565432110000 0000000000000000000011234567889999999999999999999986421
Q ss_pred -CCCcEEE-EEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecC---CCCC
Q 002665 346 -ELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPA---FIEP 420 (895)
Q Consensus 346 -~~~~l~l-ivG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps---~~eg 420 (895)
..+++.+ ++|+|+.. ..+.+.++++++.+.+.+.|+++.++++.+|+.| |++|.|+ ..++
T Consensus 265 ~~~~~i~l~ivG~G~~~-----------~~l~~~~~~~~l~~~~~~~g~~~~~~~~~~l~~a----Dv~v~~~~~~~~~~ 329 (415)
T cd03816 265 PKLPKLLCIITGKGPLK-----------EKYLERIKELKLKKVTIRTPWLSAEDYPKLLASA----DLGVSLHTSSSGLD 329 (415)
T ss_pred ccCCCEEEEEEecCccH-----------HHHHHHHHHcCCCcEEEEcCcCCHHHHHHHHHhC----CEEEEccccccccC
Confidence 2345664 77888753 4455778889998777777899999999999999 9999753 3578
Q ss_pred CChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHhhC---HHHHHHHHHHHHHHHhhCCHHHH
Q 002665 421 FGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSD---KQLWERCRQNGLKNIHQFSWPEH 497 (895)
Q Consensus 421 ~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~---~~~~~~~~~~~~~~v~~~s~~~~ 497 (895)
+|++++||||||+|||+++.||..|+++++.+|++++ |+++++++|.++++| ++++++|++++++.. +++|++-
T Consensus 330 ~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~-~~~~~~~ 406 (415)
T cd03816 330 LPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEES-ELRWDEN 406 (415)
T ss_pred CcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh-hcCHHHH
Confidence 9999999999999999999999999999999999994 999999999999998 999999999999887 4555544
Q ss_pred H
Q 002665 498 C 498 (895)
Q Consensus 498 a 498 (895)
.
T Consensus 407 ~ 407 (415)
T cd03816 407 W 407 (415)
T ss_pred H
Confidence 3
No 41
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=100.00 E-value=6e-31 Score=294.87 Aligned_cols=287 Identities=24% Similarity=0.254 Sum_probs=218.2
Q ss_pred CCCcEEEeccC--CchHHHHHHhccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEE
Q 002665 146 IWPVAIHGHYA--DAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVI 223 (895)
Q Consensus 146 ~~pDvIh~h~~--~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi 223 (895)
.+||+||+|.. .....+...++..++|++++.|+....... . . ....+.......+...++.++.++
T Consensus 86 ~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~----~----~~~~~~~~~~~~~~~~~~~~~~i~ 154 (375)
T cd03821 86 READIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWAL---P----H----KALKKRLAWFLFERRLLQAAAAVH 154 (375)
T ss_pred CCCCEEEEecccchHHHHHHHHHHHhCCCEEEEcccccccccc---c----c----chhhhHHHHHHHHHHHHhcCCEEE
Confidence 46999999973 345556667777899999999987543311 0 0 001111122223566788999999
Q ss_pred ecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCch
Q 002665 224 TSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPI 303 (895)
Q Consensus 224 ~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (895)
+++..........+.. .++.++|||+|...|.+.....
T Consensus 155 ~~s~~~~~~~~~~~~~------------------------~~~~vi~~~~~~~~~~~~~~~~------------------ 192 (375)
T cd03821 155 ATSEQEAAEIRRLGLK------------------------APIAVIPNGVDIPPFAALPSRG------------------ 192 (375)
T ss_pred ECCHHHHHHHHhhCCc------------------------ccEEEcCCCcChhccCcchhhh------------------
Confidence 9997665544332211 2899999999998875432110
Q ss_pred hhhhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCC
Q 002665 304 WSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDL 383 (895)
Q Consensus 304 ~~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l 383 (895)
....+....++++|+++||+.+.||++.+++|+..+.+..+...+ +++|.++... ...+...+.++++
T Consensus 193 --~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l-~i~G~~~~~~---------~~~~~~~~~~~~~ 260 (375)
T cd03821 193 --RRRKFPILPDKRIILFLGRLHPKKGLDLLIEAFAKLAERFPDWHL-VIAGPDEGGY---------RAELKQIAAALGL 260 (375)
T ss_pred --hhhhccCCCCCcEEEEEeCcchhcCHHHHHHHHHHhhhhcCCeEE-EEECCCCcch---------HHHHHHHHHhcCc
Confidence 012233356789999999999999999999999999754344344 4677654321 1233344578889
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCHHH
Q 002665 384 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQS 463 (895)
Q Consensus 384 ~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~ 463 (895)
.++|.|.|+++.+++..+|+.| |++++||..|+||++++|||+||+|||+++.||..+++.+ ..|++++ .+.++
T Consensus 261 ~~~v~~~g~~~~~~~~~~~~~a----dv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~~-~~~~~ 334 (375)
T cd03821 261 EDRVTFTGMLYGEDKAAALADA----DLFVLPSHSENFGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVVD-DDVDA 334 (375)
T ss_pred cceEEEcCCCChHHHHHHHhhC----CEEEeccccCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEeC-CChHH
Confidence 8999999999999999999999 9999999999999999999999999999999999999987 7888875 46699
Q ss_pred HHHHHHHHhhCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHH
Q 002665 464 IADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLS 503 (895)
Q Consensus 464 la~ai~~ll~~~~~~~~~~~~~~~~v-~~~s~~~~a~~~~~ 503 (895)
++++|.+++++++.++.+++++++.+ ++|+|+..+++|++
T Consensus 335 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 375 (375)
T cd03821 335 LAAALRRALELPQRLKAMGENGRALVEERFSWTAIAQQLLE 375 (375)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHhhC
Confidence 99999999999999999999999997 79999999998863
No 42
>PLN02382 probable sucrose-phosphatase
Probab=100.00 E-value=2.1e-32 Score=306.61 Aligned_cols=247 Identities=19% Similarity=0.222 Sum_probs=185.7
Q ss_pred cccEEEEEEecCCCCh-----hhHHHHHH-HHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCc
Q 002665 608 RRKYVFVIAADCDTTS-----DFLEIIKK-VVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGS 681 (895)
Q Consensus 608 ~~~kli~~DiDGTL~~-----~~~~~~~~-~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa 681 (895)
+++.+|++||||||.+ ..+..... .++++.++| +.|++||||++.++.++++++++ ..||++||+||+
T Consensus 7 ~~~~lI~sDLDGTLL~~~~~~~~s~~~~~~l~~~~~~~g----i~fv~aTGR~~~~~~~l~~~~~l--~~p~~~I~~nGt 80 (413)
T PLN02382 7 SPRLMIVSDLDHTMVDHHDPENLSLLRFNALWEAEYRHD----SLLVFSTGRSPTLYKELRKEKPL--LTPDITIMSVGT 80 (413)
T ss_pred CCCEEEEEcCCCcCcCCCCccchhHHHHHHHHHHhhcCC----eeEEEEcCCCHHHHHHHHHhCCC--CCCCEEEEcCCc
Confidence 5688999999999953 23323333 337777765 99999999999999999999988 468999999999
Q ss_pred eEecCCCCCCCCCCCCcccCcchhhhhccccCcchHHHHHHHHhhhccCCCCccCcccccccccccceEEEEEecCCCCC
Q 002665 682 ELYYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMI 761 (895)
Q Consensus 682 ~I~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~ 761 (895)
+|++.+ ....+..|...+...|....+.+.+..++.... +....+..+|++++..+....
T Consensus 81 ~I~~~~---------~~~~d~~w~~~l~~~w~~~~v~~~~~~~~~l~~-----------q~~~~~~~~Ki~~~~~~~~~~ 140 (413)
T PLN02382 81 EIAYGE---------SMVPDHGWVEYLNKKWDREIVVEETSKFPELKL-----------QPETEQRPHKVSFYVDKKKAQ 140 (413)
T ss_pred EEEeCC---------CCccChhHHHHHhccCChhhHHHHHhcCCCccc-----------CCcccCCCeEEEEEechHHhH
Confidence 999864 455778899999999986555444444433221 222345688998886532222
Q ss_pred cCHHHHHHHHHhhcCeEEEEEeeCCeeEEeecCCCChHHHHHHHHHHh---CCCcccEEEEeCcCCCccccccccCcc-e
Q 002665 762 PPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRW---GIDLSNVVVIAGECGDTDYEGLLGGVH-K 837 (895)
Q Consensus 762 ~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~l---gi~~~~viafgGD~nn~D~~~Ml~~ag-~ 837 (895)
...+++.+.+.+.+..+.++.+++. ++||+|+++|||.||++|++++ |+++++++| +||+.| | ++||+.+| +
T Consensus 141 ~~~~~l~~~~~~~g~~~~i~~s~~~-~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~ia-fGDs~N-D-leMl~~ag~~ 216 (413)
T PLN02382 141 EVIKELSERLEKRGLDVKIIYSGGI-DLDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLV-CGDSGN-D-AELFSVPDVY 216 (413)
T ss_pred HHHHHHHHHHHhcCCcEEEEEECCc-EEEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEE-EeCCHH-H-HHHHhcCCCC
Confidence 2234455555555667888888886 9999999999999999999999 999999999 677777 7 99999999 8
Q ss_pred EEEEcCchhhhHhhhhcCCCCCCCcccCCCCceEEeccccChHHHHHHHHHhcccc
Q 002665 838 TVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGVLK 893 (895)
Q Consensus 838 gVaMgNA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~gI~~al~~~~~~~ 893 (895)
||||+||. .+++.+++.+. ...+.+ +.+++.+++||++||+||+|+.
T Consensus 217 gvam~NA~--~elk~~a~~~~------~~~~~~-~~a~~~~~~GI~~al~~f~l~~ 263 (413)
T PLN02382 217 GVMVSNAQ--EELLQWYAENA------KDNPKI-IHATERCAAGIIQAIGHFNLGP 263 (413)
T ss_pred EEEEcCCc--HHHHHHHHhhc------cCCCcE-EEcCCCCccHHHHHHHHhCCCC
Confidence 99999999 66666544211 111222 3567889999999999999873
No 43
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=100.00 E-value=6.6e-31 Score=291.77 Aligned_cols=332 Identities=20% Similarity=0.204 Sum_probs=234.6
Q ss_pred eEEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhh
Q 002665 7 NMKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLM 86 (895)
Q Consensus 7 ~~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 86 (895)
|||++|+.... + . -+|..||.++++.+|+++|.+.| |+|++++......
T Consensus 1 MkI~~i~~~~~----~--~-~~~~~GG~~~~~~~l~~~L~~~g--~~V~v~~~~~~~~---------------------- 49 (335)
T cd03802 1 MRIALVAPPRE----P--V-PPPAYGGTERVVAALTEGLVARG--HEVTLFASGDSKT---------------------- 49 (335)
T ss_pred CeEEEEcCCcc----c--C-CCcccCcHHHHHHHHHHHHHhcC--ceEEEEecCCCCc----------------------
Confidence 89999996443 0 0 13689999999999999999999 9999999752110
Q ss_pred cccCCCCCcEEEEecCCCCCccccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHHh
Q 002665 87 QGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLS 166 (895)
Q Consensus 87 ~~~~~~~g~~i~r~~~~~~~~~l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~~ 166 (895)
....+....... .... .............+.+.+.+ .+|||||+|.+..... ++
T Consensus 50 -------~~~~~~~~~~~~--~~~~-------~~~~~~~~~~~~~~~~~~~~-------~~~Divh~~~~~~~~~---~~ 103 (335)
T cd03802 50 -------AAPLVPVVPEPL--RLDA-------PGRDRAEAEALALAERALAA-------GDFDIVHNHSLHLPLP---FA 103 (335)
T ss_pred -------ccceeeccCCCc--cccc-------chhhHhhHHHHHHHHHHHhc-------CCCCEEEecCcccchh---hh
Confidence 000111110000 0000 00001111222222222222 5699999998765544 56
Q ss_pred ccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHH
Q 002665 167 GALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 246 (895)
Q Consensus 167 ~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~ 246 (895)
+..++|+|++.|+....... + ........+.+++.|+...+.....
T Consensus 104 ~~~~~~~v~~~h~~~~~~~~-----------------~-------~~~~~~~~~~~~~~s~~~~~~~~~~---------- 149 (335)
T cd03802 104 RPLPVPVVTTLHGPPDPELL-----------------K-------LYYAARPDVPFVSISDAQRRPWPPL---------- 149 (335)
T ss_pred cccCCCEEEEecCCCCcccc-----------------h-------HHHhhCcCCeEEEecHHHHhhcccc----------
Confidence 67799999999987543210 0 0123567788888888655432111
Q ss_pred HHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCCC
Q 002665 247 KLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPD 326 (895)
Q Consensus 247 ~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl~ 326 (895)
.++.+||||+|++.|.+. ..+++.|+++||+.
T Consensus 150 -----------------~~~~vi~ngvd~~~~~~~-------------------------------~~~~~~i~~~Gr~~ 181 (335)
T cd03802 150 -----------------PWVATVHNGIDLDDYPFR-------------------------------GPKGDYLLFLGRIS 181 (335)
T ss_pred -----------------cccEEecCCcChhhCCCC-------------------------------CCCCCEEEEEEeec
Confidence 188999999999887541 13467899999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcC-CCCCEEeCCCCCCCcHHHHHHHh
Q 002665 327 PKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYD-LYGQVAYPKHHKQSDVPDIYRLA 405 (895)
Q Consensus 327 ~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~-l~~~v~~~g~~~~~el~~ly~~a 405 (895)
+.||++.+++++.+. ...+ +++|.++..+.+ ........ +.++|.|+|+++.+++..+|+.+
T Consensus 182 ~~Kg~~~li~~~~~~-----~~~l-~i~G~~~~~~~~-----------~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~ 244 (335)
T cd03802 182 PEKGPHLAIRAARRA-----GIPL-KLAGPVSDPDYF-----------YREIAPELLDGPDIEYLGEVGGAEKAELLGNA 244 (335)
T ss_pred cccCHHHHHHHHHhc-----CCeE-EEEeCCCCHHHH-----------HHHHHHhcccCCcEEEeCCCCHHHHHHHHHhC
Confidence 999999999998653 2333 477877643322 12222222 56789999999999999999999
Q ss_pred hcCCcEEEecCC-CCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHhhCHHHHHHHHHH
Q 002665 406 AKTKGVFINPAF-IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQN 484 (895)
Q Consensus 406 ~~~~Dv~v~ps~-~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~ 484 (895)
|++++|+. .|+||++++||||||+|||+++.||..|++.++.+|+++++ +++++++|.+++..+. ++
T Consensus 245 ----d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~~~~~------~~ 312 (335)
T cd03802 245 ----RALLFPILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARADRLDR------AA 312 (335)
T ss_pred ----cEEEeCCcccCCcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHhccHH------HH
Confidence 99999997 59999999999999999999999999999999889999985 9999999999876432 34
Q ss_pred HHHHH-hhCCHHHHHHHHHHHHH
Q 002665 485 GLKNI-HQFSWPEHCKSYLSRIS 506 (895)
Q Consensus 485 ~~~~v-~~~s~~~~a~~~~~~l~ 506 (895)
+++.+ ++|||+..+++|+++|+
T Consensus 313 ~~~~~~~~~s~~~~~~~~~~~y~ 335 (335)
T cd03802 313 CRRRAERRFSAARMVDDYLALYR 335 (335)
T ss_pred HHHHHHHhCCHHHHHHHHHHHhC
Confidence 56666 79999999999999873
No 44
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=100.00 E-value=3.6e-31 Score=296.69 Aligned_cols=364 Identities=23% Similarity=0.314 Sum_probs=258.5
Q ss_pred EEEEEecccccccCccCCCCCC-CCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhh
Q 002665 8 MKYLCSLHGLIRGENMELGRDS-DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLM 86 (895)
Q Consensus 8 ~i~~i~~~~~~~~~~~~~g~~~-~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 86 (895)
||++++.+.. | ..||+++|+.+|+++|++.| |+|++++.............
T Consensus 1 ~ili~~~~~~-----------~~~~gG~~~~~~~l~~~L~~~~--~~v~~~~~~~~~~~~~~~~~--------------- 52 (365)
T cd03809 1 RILIDARFLA-----------SRRPTGIGRYARELLRALLKLD--PEEVLLLLPGAPGLLLLPLR--------------- 52 (365)
T ss_pred CEEEechhhh-----------cCCCCcHHHHHHHHHHHHHhcC--CceEEEEecCccccccccch---------------
Confidence 4667775543 4 79999999999999999999 99999998643211100000
Q ss_pred cccCCCCCcEEEEecCCCCCccccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHHh
Q 002665 87 QGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLS 166 (895)
Q Consensus 87 ~~~~~~~g~~i~r~~~~~~~~~l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~~ 166 (895)
..... .. .......+.....+ .+..... ... .+||+||++++.....
T Consensus 53 ------~~~~~--~~------~~~~~~~~~~~~~~---~~~~~~~----~~~-------~~~Dii~~~~~~~~~~----- 99 (365)
T cd03809 53 ------AALRL--LL------RLPRRLLWGLLFLL---RAGDRLL----LLL-------LGLDLLHSPHNTAPLL----- 99 (365)
T ss_pred ------hcccc--cc------ccccccccchhhHH---HHHHHHH----hhh-------cCCCeeeecccccCcc-----
Confidence 00000 00 00011111111111 1111111 111 4699999998754433
Q ss_pred ccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHH
Q 002665 167 GALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 246 (895)
Q Consensus 167 ~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~ 246 (895)
+..++|+++++|++.+....... . .. .....++ .++..++.+|.+++.|+...+.+.+.|+. .+.
T Consensus 100 ~~~~~~~i~~~hd~~~~~~~~~~-----~-~~---~~~~~~~--~~~~~~~~~d~~i~~s~~~~~~~~~~~~~-~~~--- 164 (365)
T cd03809 100 RLRGVPVVVTIHDLIPLRFPEYF-----S-PG---FRRYFRR--LLRRALRRADAIITVSEATKRDLLRYLGV-PPD--- 164 (365)
T ss_pred cCCCCCEEEEeccchhhhCcccC-----C-HH---HHHHHHH--HHHHHHHHcCEEEEccHHHHHHHHHHhCc-CHH---
Confidence 56799999999998654432211 0 00 1112222 36678999999999999888877666643 222
Q ss_pred HHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCCC
Q 002665 247 KLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPD 326 (895)
Q Consensus 247 ~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl~ 326 (895)
++.++|||+|...+.+.... . .......++++.|+++||+.
T Consensus 165 ------------------~~~vi~~~~~~~~~~~~~~~--------------------~-~~~~~~~~~~~~i~~~G~~~ 205 (365)
T cd03809 165 ------------------KIVVIPLGVDPRFRPPPAEA--------------------E-VLRALYLLPRPYFLYVGTIE 205 (365)
T ss_pred ------------------HEEeeccccCccccCCCchH--------------------H-HHHHhcCCCCCeEEEeCCCc
Confidence 89999999998877542210 0 11122345788999999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhh
Q 002665 327 PKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAA 406 (895)
Q Consensus 327 ~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~ 406 (895)
+.||++.+++++..+....+...+ +++|.+...... ....+.+.++.++|.+.|+++.+++..+|+.|
T Consensus 206 ~~K~~~~~l~~~~~~~~~~~~~~l-~i~G~~~~~~~~----------~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~- 273 (365)
T cd03809 206 PRKNLERLLEAFARLPAKGPDPKL-VIVGKRGWLNEE----------LLARLRELGLGDRVRFLGYVSDEELAALYRGA- 273 (365)
T ss_pred cccCHHHHHHHHHHHHHhcCCCCE-EEecCCccccHH----------HHHHHHHcCCCCeEEECCCCChhHHHHHHhhh-
Confidence 999999999999999764443344 366665433221 11222567888899999999999999999999
Q ss_pred cCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHhhCHHHHHHHHHHHH
Q 002665 407 KTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGL 486 (895)
Q Consensus 407 ~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~ 486 (895)
|++++|+..|++|++++|||++|+|||+++.|+..|++. .+|+++++.|+++++++|.+++++++.+..++++++
T Consensus 274 ---d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~ 348 (365)
T cd03809 274 ---RAFVFPSLYEGFGLPVLEAMACGTPVIASNISSLPEVAG--DAALYFDPLDPEALAAAIERLLEDPALREELRERGL 348 (365)
T ss_pred ---hhhcccchhccCCCCHHHHhcCCCcEEecCCCCccceec--CceeeeCCCCHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999984 569999999999999999999999999999999999
Q ss_pred HHHhhCCHHHHHHHHHH
Q 002665 487 KNIHQFSWPEHCKSYLS 503 (895)
Q Consensus 487 ~~v~~~s~~~~a~~~~~ 503 (895)
+.+++|+|+.+++++++
T Consensus 349 ~~~~~~sw~~~~~~~~~ 365 (365)
T cd03809 349 ARAKRFSWEKTARRTLD 365 (365)
T ss_pred HHHHhCCHHHHHHHHhC
Confidence 88899999999998863
No 45
>PLN02846 digalactosyldiacylglycerol synthase
Probab=100.00 E-value=1.2e-30 Score=292.80 Aligned_cols=376 Identities=16% Similarity=0.102 Sum_probs=243.8
Q ss_pred cceEEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCC------ccccccc
Q 002665 5 DFNMKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYA------EPSEMLN 78 (895)
Q Consensus 5 ~~~~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~------~~~e~~~ 78 (895)
+.|||++++-=++ |..+|++..+..++..|+++|. |+|+||++..........|+ .+.++-
T Consensus 3 ~~mrIaivTdt~l-----------P~vnGva~s~~~~a~~L~~~G~-heV~vvaP~~~~~~~~~~~~~~~~f~~~~~~e- 69 (462)
T PLN02846 3 KKQHIAIFTTASL-----------PWMTGTAVNPLFRAAYLAKDGD-REVTLVIPWLSLKDQKLVYPNKITFSSPSEQE- 69 (462)
T ss_pred CCCEEEEEEcCCC-----------CCCCCeeccHHHHHHHHHhcCC-cEEEEEecCCccccccccccccccccCchhhh-
Confidence 4699999997776 9999999999999999999983 49999987532110011111 111000
Q ss_pred cccchhhhcccCCCCCcEEEEecCCCCCccccccccCCCc-hhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCC
Q 002665 79 RKNTENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHI-PEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYAD 157 (895)
Q Consensus 79 ~~~~~~~~~~~~~~~g~~i~r~~~~~~~~~l~k~~~~~~l-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~ 157 (895)
+.+....+.++.+++..+..-|-.+ .-+++. .-....+.+.+ .+ .+|||||+|.+.
T Consensus 70 --------~~~~~~~~~~v~r~~s~~~p~yp~r-~~~~~r~~~~~~~i~~~l-------~~-------~~pDVIHv~tP~ 126 (462)
T PLN02846 70 --------AYVRQWLEERISFLPKFSIKFYPGK-FSTDKRSILPVGDISETI-------PD-------EEADIAVLEEPE 126 (462)
T ss_pred --------hhhhhhccCeEEEecccccccCccc-ccccccccCChHHHHHHH-------Hh-------cCCCEEEEcCch
Confidence 0111222456667765444211110 000000 00111222222 22 579999999874
Q ss_pred -chHH--HHHHhccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHH
Q 002665 158 -AGDA--AALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQW 234 (895)
Q Consensus 158 -~~~~--~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~ 234 (895)
.++. +...++++++ +|.+.|.-...+...+ ..|..........+++.+| .++|.+++.|... ..+.
T Consensus 127 ~LG~~~~g~~~~~k~~~-vV~tyHT~y~~Y~~~~-~~g~~~~~l~~~~~~~~~r--------~~~d~vi~pS~~~-~~l~ 195 (462)
T PLN02846 127 HLTWYHHGKRWKTKFRL-VIGIVHTNYLEYVKRE-KNGRVKAFLLKYINSWVVD--------IYCHKVIRLSAAT-QDYP 195 (462)
T ss_pred hhhhHHHHHHHHhcCCc-EEEEECCChHHHHHHh-ccchHHHHHHHHHHHHHHH--------HhcCEEEccCHHH-HHHh
Confidence 5665 6777777765 8889998544333221 1111111011111122222 2489999999743 2221
Q ss_pred HHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCC
Q 002665 235 RLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNP 314 (895)
Q Consensus 235 ~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (895)
. .+.+.++|||.+.|.+..... . ... ...
T Consensus 196 ~-----------------------------~~i~~v~GVd~~~f~~~~~~~-------------------~--~~~-~~~ 224 (462)
T PLN02846 196 R-----------------------------SIICNVHGVNPKFLEIGKLKL-------------------E--QQK-NGE 224 (462)
T ss_pred h-----------------------------CEEecCceechhhcCCCcccH-------------------h--hhc-CCC
Confidence 1 444567999999887643110 0 001 112
Q ss_pred C--CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCC
Q 002665 315 R--KPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPK 391 (895)
Q Consensus 315 ~--~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~-livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g 391 (895)
+ .+.++|+||+.+.||++.+|+|+..+.+..+ ++. +|+|+|++.++ +.+++.++++..++ |.|
T Consensus 225 ~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~--~~~l~ivGdGp~~~~-----------L~~~a~~l~l~~~v-f~G 290 (462)
T PLN02846 225 QAFTKGAYYIGKMVWSKGYKELLKLLHKHQKELS--GLEVDLYGSGEDSDE-----------VKAAAEKLELDVRV-YPG 290 (462)
T ss_pred CCcceEEEEEecCcccCCHHHHHHHHHHHHhhCC--CeEEEEECCCccHHH-----------HHHHHHhcCCcEEE-ECC
Confidence 2 3579999999999999999999998854333 444 58899987544 44677788876444 777
Q ss_pred CCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHH
Q 002665 392 HHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKL 471 (895)
Q Consensus 392 ~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~l 471 (895)
. .+..++|+.+ ||||+||..|+||++++||||||+|||+++.++ .+++.++.+|++++ |.++++++|.++
T Consensus 291 ~---~~~~~~~~~~----DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~--~~~~~a~ai~~~ 360 (462)
T PLN02846 291 R---DHADPLFHDY----KVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTYD--DGKGFVRATLKA 360 (462)
T ss_pred C---CCHHHHHHhC----CEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEecC--CHHHHHHHHHHH
Confidence 6 3445799999 999999999999999999999999999999997 59999999999984 899999999999
Q ss_pred hhCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Q 002665 472 VSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISS 507 (895)
Q Consensus 472 l~~~~~~~~~~~~~~~~v~~~s~~~~a~~~~~~l~~ 507 (895)
|+++. ..+...+ .++|||+..+++|++.++-
T Consensus 361 l~~~~--~~~~~~a---~~~~SWe~~~~~l~~~~~~ 391 (462)
T PLN02846 361 LAEEP--APLTDAQ---RHELSWEAATERFLRVADL 391 (462)
T ss_pred HccCc--hhHHHHH---HHhCCHHHHHHHHHHHhcc
Confidence 98432 1222222 2589999999999999973
No 46
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=100.00 E-value=3e-31 Score=297.74 Aligned_cols=347 Identities=16% Similarity=0.150 Sum_probs=243.6
Q ss_pred eEEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcC--CCcceEEEeeccccCCCCCCCCCccccccccccchh
Q 002665 7 NMKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSM--PGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTEN 84 (895)
Q Consensus 7 ~~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~--g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~ 84 (895)
|||+++... . |..||+++++.+++++|.++ | ++|.++++.... ..+.+
T Consensus 1 mkI~~~~~~-~-----------~~~GG~e~~~~~l~~~L~~~~~g--~~v~v~~~~~~~---------~~~~~------- 50 (359)
T PRK09922 1 MKIAFIGEA-V-----------SGFGGMETVISNVINTFEESKIN--CEMFFFCRNDKM---------DKAWL------- 50 (359)
T ss_pred CeeEEeccc-c-----------cCCCchhHHHHHHHHHhhhcCcc--eeEEEEecCCCC---------ChHHH-------
Confidence 899999742 2 56799999999999999999 7 899999875210 00000
Q ss_pred hhcccCCCCCcEEE-EecCCCCCccccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHH
Q 002665 85 LMQGLGESSGAYII-RIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAA 163 (895)
Q Consensus 85 ~~~~~~~~~g~~i~-r~~~~~~~~~l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~ 163 (895)
..+.+. .++.... ..++. .....++.+.+++ .+||+||+|...+..++.
T Consensus 51 --------~~~~~~~~~~~~~~-~~~~~--------------~~~~~~l~~~l~~-------~~~Dii~~~~~~~~~~~~ 100 (359)
T PRK09922 51 --------KEIKYAQSFSNIKL-SFLRR--------------AKHVYNFSKWLKE-------TQPDIVICIDVISCLYAN 100 (359)
T ss_pred --------Hhcchhcccccchh-hhhcc--------------cHHHHHHHHHHHh-------cCCCEEEEcCHHHHHHHH
Confidence 000000 0110000 00000 0111222223333 579999999875556666
Q ss_pred HHhccCCCC--EEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCC
Q 002665 164 LLSGALNVP--MVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFD 241 (895)
Q Consensus 164 ~~~~~~~ip--~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~ 241 (895)
.+++..++| ++.+.|...... . .+. ...+..+|.+++.|+...+.+.. +. ..
T Consensus 101 ~~~~~~~~~~~~~~~~h~~~~~~--------~--------~~~--------~~~~~~~d~~i~~S~~~~~~~~~-~~-~~ 154 (359)
T PRK09922 101 KARKKSGKQFKIFSWPHFSLDHK--------K--------HAE--------CKKITCADYHLAISSGIKEQMMA-RG-IS 154 (359)
T ss_pred HHHHHhCCCCeEEEEecCccccc--------c--------hhh--------hhhhhcCCEEEEcCHHHHHHHHH-cC-CC
Confidence 666666655 455667432110 0 000 01136899999999987666543 32 22
Q ss_pred hHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEE
Q 002665 242 PVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILA 321 (895)
Q Consensus 242 ~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~ 321 (895)
+. ++.+||||+|.+.+....+ ...+++.|++
T Consensus 155 ~~---------------------ki~vi~N~id~~~~~~~~~----------------------------~~~~~~~i~~ 185 (359)
T PRK09922 155 AQ---------------------RISVIYNPVEIKTIIIPPP----------------------------ERDKPAVFLY 185 (359)
T ss_pred HH---------------------HEEEEcCCCCHHHccCCCc----------------------------ccCCCcEEEE
Confidence 32 8999999999765432110 0134688999
Q ss_pred EeCCC--CCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCC--C
Q 002665 322 LARPD--PKKNITTLVKAFGECRPLRELANLT-LIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQ--S 396 (895)
Q Consensus 322 vgrl~--~~Kgi~~ll~A~~~l~~~~~~~~l~-livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~--~ 396 (895)
+||+. ..||+..+++|+..+. + ++. +++|++++. ..+.+.++++++.++|.|.|+++. +
T Consensus 186 ~Grl~~~~~k~~~~l~~a~~~~~---~--~~~l~ivG~g~~~-----------~~l~~~~~~~~l~~~v~f~G~~~~~~~ 249 (359)
T PRK09922 186 VGRLKFEGQKNVKELFDGLSQTT---G--EWQLHIIGDGSDF-----------EKCKAYSRELGIEQRIIWHGWQSQPWE 249 (359)
T ss_pred EEEEecccCcCHHHHHHHHHhhC---C--CeEEEEEeCCccH-----------HHHHHHHHHcCCCCeEEEecccCCcHH
Confidence 99986 4699999999999873 2 344 478888753 345577888899999999998754 6
Q ss_pred cHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcC-CCCcccccccCCceEEeCCCCHHHHHHHHHHHhhCH
Q 002665 397 DVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATK-NGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDK 475 (895)
Q Consensus 397 el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~-~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~ 475 (895)
++..+|..| |++|+||..||||++++||||||+|||+++ .||..|++.++.+|++++|+|+++++++|.++++++
T Consensus 250 ~~~~~~~~~----d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~ 325 (359)
T PRK09922 250 VVQQKIKNV----SALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVISGE 325 (359)
T ss_pred HHHHHHhcC----cEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEECCCCHHHHHHHHHHHHhCc
Confidence 899999999 999999999999999999999999999999 899999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhhh
Q 002665 476 QLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQ 510 (895)
Q Consensus 476 ~~~~~~~~~~~~~v~~~s~~~~a~~~~~~l~~~~~ 510 (895)
+.+ ......+.+++|+-+...+++.+.+..++.
T Consensus 326 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
T PRK09922 326 VKY--QHDAIPNSIERFYEVLYFKNLNNALFSKLQ 358 (359)
T ss_pred ccC--CHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 754 233444455788999999999999987753
No 47
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=100.00 E-value=1.3e-30 Score=292.30 Aligned_cols=371 Identities=23% Similarity=0.310 Sum_probs=261.9
Q ss_pred EEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhhc
Q 002665 8 MKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 87 (895)
Q Consensus 8 ~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 87 (895)
||++++... +|+.||.+.++.+++++|++.| |+|+++|.......... .
T Consensus 1 kil~~~~~~-----------~p~~~G~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~~~--------~---------- 49 (374)
T cd03817 1 KIGIFTDTY-----------LPQVNGVATSIRRLAEELEKRG--HEVYVVAPSYPGAPEEE--------E---------- 49 (374)
T ss_pred CeeEeehhc-----------cCCCCCeehHHHHHHHHHHHcC--CeEEEEeCCCCCCCccc--------c----------
Confidence 577777544 3899999999999999999999 99999997632111100 0
Q ss_pred ccCCCCCcEEEEecCCCCCccccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccC-CchHHHHHHh
Q 002665 88 GLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYA-DAGDAAALLS 166 (895)
Q Consensus 88 ~~~~~~g~~i~r~~~~~~~~~l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~-~~~~~~~~~~ 166 (895)
..+....+... ... ....+. ..+...+.. .+.+ .+||+||+|.. ..+..+..++
T Consensus 50 ----~~~~~~~~~~~----~~~-~~~~~~--~~~~~~~~~-------~~~~-------~~~Div~~~~~~~~~~~~~~~~ 104 (374)
T cd03817 50 ----VVVVRPFRVPT----FKY-PDFRLP--LPIPRALII-------ILKE-------LGPDIVHTHTPFSLGLLGLRVA 104 (374)
T ss_pred ----ccccccccccc----chh-hhhhcc--ccHHHHHHH-------HHhh-------cCCCEEEECCchhhhhHHHHHH
Confidence 00111111100 000 000000 011111111 1111 56999999975 4556677788
Q ss_pred ccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHH
Q 002665 167 GALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 246 (895)
Q Consensus 167 ~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~ 246 (895)
+..++|++++.|+.+........ ..... ...... ...++..++.||.+++.|+...+.+. .+..
T Consensus 105 ~~~~~~~i~~~~~~~~~~~~~~~-~~~~~------~~~~~~-~~~~~~~~~~~d~i~~~s~~~~~~~~-~~~~------- 168 (374)
T cd03817 105 RKLGIPVVATYHTMYEDYTHYVP-LGRLL------ARAVVR-RKLSRRFYNRCDAVIAPSEKIADLLR-EYGV------- 168 (374)
T ss_pred HHcCCCEEEEecCCHHHHHHHHh-cccch------hHHHHH-HHHHHHHhhhCCEEEeccHHHHHHHH-hcCC-------
Confidence 88999999999998764332221 11100 000111 02467789999999999997655432 2221
Q ss_pred HHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCCC
Q 002665 247 KLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPD 326 (895)
Q Consensus 247 ~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl~ 326 (895)
. .++.++|+|+|...+.+.... ..+..+...++++.|+++|++.
T Consensus 169 ----------~------~~~~vi~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~i~~~G~~~ 212 (374)
T cd03817 169 ----------K------RPIEVIPTGIDLDRFEPVDGD--------------------DERRKLGIPEDEPVLLYVGRLA 212 (374)
T ss_pred ----------C------CceEEcCCccchhccCccchh--------------------HHHHhcCCCCCCeEEEEEeeee
Confidence 1 168999999999877643211 0122333346678999999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHh
Q 002665 327 PKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLA 405 (895)
Q Consensus 327 ~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a 405 (895)
+.||++.+++++..+... .+++.+ ++|+++.. ..+...++++++.++|.|.|+++.+++..+|+.|
T Consensus 213 ~~k~~~~l~~~~~~~~~~--~~~~~l~i~G~~~~~-----------~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a 279 (374)
T cd03817 213 KEKNIDFLIRAFARLLKE--EPDVKLVIVGDGPER-----------EELEELARELGLADRVIFTGFVPREELPDYYKAA 279 (374)
T ss_pred cccCHHHHHHHHHHHHHh--CCCeEEEEEeCCchH-----------HHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHc
Confidence 999999999999998643 344554 66776532 3455667778888999999999999999999999
Q ss_pred hcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHhhCHHHHHHHHHHH
Q 002665 406 AKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNG 485 (895)
Q Consensus 406 ~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~ 485 (895)
|++++|+..|++|++++|||+||+|||+++.|+..+++.++.+|+++++.+. +++++|.+++++++.++++++++
T Consensus 280 ----d~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~~~~~~~~~~~ 354 (374)
T cd03817 280 ----DLFVFASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLLQDPELRRRLSKNA 354 (374)
T ss_pred ----CEEEecccccCcChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHHhChHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999899999998888 99999999999999999999999
Q ss_pred HHHHhhCCHHHHHHHHHHHHHH
Q 002665 486 LKNIHQFSWPEHCKSYLSRISS 507 (895)
Q Consensus 486 ~~~v~~~s~~~~a~~~~~~l~~ 507 (895)
++.+++++ +++++.+++++
T Consensus 355 ~~~~~~~~---~~~~~~~~~~~ 373 (374)
T cd03817 355 EESAEKFS---FAKKVEKLYEE 373 (374)
T ss_pred HHHHHHHH---HHHHHHHHHhc
Confidence 99997666 55566666553
No 48
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=100.00 E-value=8e-32 Score=285.51 Aligned_cols=242 Identities=18% Similarity=0.247 Sum_probs=183.6
Q ss_pred cEEEEEEecCCCCh------hhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCceE
Q 002665 610 KYVFVIAADCDTTS------DFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSEL 683 (895)
Q Consensus 610 ~kli~~DiDGTL~~------~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I 683 (895)
+.+|++|+||||++ ..++.+.+++++++++| +.|++||||++.++.++++++++ ..|+++||+||+.|
T Consensus 1 ~~li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~~g----i~fv~aTGR~~~~~~~~~~~~~~--~~p~~~I~~NGa~I 74 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTDGDNQALLRLNALLEDHRGED----SLLVYSTGRSPHSYKELQKQKPL--LTPDIWVTSVGSEI 74 (249)
T ss_pred CeEEEEcCCCcCcCCCCCChHHHHHHHHHHHHhhccC----ceEEEEcCCCHHHHHHHHhcCCC--CCCCEEEEcCCceE
Confidence 45899999999963 46788899999888886 89999999999999999999988 45889999999999
Q ss_pred ecCCCCCCCCCCCCcccCcchhhhhccccCcchHHHHHHHHhhhccCCCCccCcccccccccccceEEEEEecCCCCCcC
Q 002665 684 YYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMIPP 763 (895)
Q Consensus 684 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~ 763 (895)
++.+ ....+..|...+...|..+.+......++.... ........+|++++.........
T Consensus 75 ~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----------~~~~~~~~~k~~~~~~~~~~~~~ 134 (249)
T TIGR01485 75 YYGG---------AEVPDQHWAEYLSEKWQRDIVVAITDKFEELKP-----------QPDLEQRPHKVSFFLDPEAAPEV 134 (249)
T ss_pred EeCC---------CCcCCHHHHHHHhcccCHHHHHHHHhcCccccc-----------CCccccCCeeEEEEechhhhhHH
Confidence 9753 234567888888888885544443322222111 11123457888887642221222
Q ss_pred HHHHHHHHHhhcCeEEEEEeeCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccC-cceEEEEc
Q 002665 764 VKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGG-VHKTVILK 842 (895)
Q Consensus 764 ~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~-ag~gVaMg 842 (895)
++++.+.+...+..+.++.+++. ++||+|+++|||.|+++|++++|++++++++ +||+.| | ++||+. ++.+|||+
T Consensus 135 ~~~l~~~l~~~~~~~~~~~~~~~-~ldi~~~~~~K~~al~~l~~~~~i~~~~~i~-~GD~~N-D-~~ml~~~~~~~va~~ 210 (249)
T TIGR01485 135 IKQLTEMLKETGLDVKLIYSSGK-DLDILPQGSGKGQALQYLLQKLAMEPSQTLV-CGDSGN-D-IELFEIGSVRGVIVS 210 (249)
T ss_pred HHHHHHHHHhcCCCEEEEEECCc-eEEEEeCCCChHHHHHHHHHHcCCCccCEEE-EECChh-H-HHHHHccCCcEEEEC
Confidence 45666666666667888888875 9999999999999999999999999999999 666666 7 999998 67999999
Q ss_pred CchhhhHhhhhcCCCCCCCcccCCCCceEEeccccChHHHHHHHHHhccc
Q 002665 843 GVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGVL 892 (895)
Q Consensus 843 NA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~gI~~al~~~~~~ 892 (895)
||. .+++...+ +...+ ..|+|+.+.++||++||+||+|+
T Consensus 211 na~--~~~k~~~~--------~~~~~-~~~~~~~~~~~Gi~e~l~~~~~~ 249 (249)
T TIGR01485 211 NAQ--EELLQWYD--------ENAKD-KIYHASERCAGGIIEAIAHFDLL 249 (249)
T ss_pred CCH--HHHHHHHH--------hcccC-cEEEecCCCcHHHHHHHHHcCCC
Confidence 999 54443322 11122 34688999999999999999985
No 49
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=100.00 E-value=2.7e-30 Score=289.72 Aligned_cols=356 Identities=20% Similarity=0.223 Sum_probs=250.0
Q ss_pred EEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhhc
Q 002665 8 MKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 87 (895)
Q Consensus 8 ~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 87 (895)
||++|+... |..||.++++.+|+++|+++| |+|++++.....+.... ..
T Consensus 1 kI~~v~~~~------------~~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~~~--~~--------------- 49 (366)
T cd03822 1 RIALVSPYP------------PRKCGIATFTTDLVNALSARG--PDVLVVSVAALYPSLLY--GG--------------- 49 (366)
T ss_pred CeEEecCCC------------CCCCcHHHHHHHHHHHhhhcC--CeEEEEEeecccCcccC--CC---------------
Confidence 688887432 669999999999999999999 99999987532111100 00
Q ss_pred ccCCCCCcEEEEecCCCCCccccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCC------chHH
Q 002665 88 GLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYAD------AGDA 161 (895)
Q Consensus 88 ~~~~~~g~~i~r~~~~~~~~~l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~------~~~~ 161 (895)
........ . . ........+.+.+ .. .+||+||++.+. ....
T Consensus 50 ---~~~~~~~~--~---------~-----~~~~~~~~~~~~~-------~~-------~~~dii~~~~~~~~~~~~~~~~ 96 (366)
T cd03822 50 ---EQEVVRVI--V---------L-----DNPLDYRRAARAI-------RL-------SGPDVVVIQHEYGIFGGEAGLY 96 (366)
T ss_pred ---cccceeee--e---------c-----CCchhHHHHHHHH-------hh-------cCCCEEEEeeccccccchhhHH
Confidence 00000000 0 0 0000111111222 11 569999998742 1222
Q ss_pred HHHHhccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCC
Q 002665 162 AALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFD 241 (895)
Q Consensus 162 ~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~ 241 (895)
.....+..++|+|++.|+..... .. ....+ .++..++.+|.+++.|.....++.....
T Consensus 97 ~~~~~~~~~~~~i~~~h~~~~~~-------~~----------~~~~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~~--- 154 (366)
T cd03822 97 LLLLLRGLGIPVVVTLHTVLLHE-------PR----------PGDRA--LLRLLLRRADAVIVMSSELLRALLLRAY--- 154 (366)
T ss_pred HHHHHhhcCCCEEEEEecCCccc-------cc----------hhhhH--HHHHHHhcCCEEEEeeHHHHHHHHhhcC---
Confidence 22333457999999999971110 00 00111 2455688999999997444444433221
Q ss_pred hHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEE
Q 002665 242 PVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILA 321 (895)
Q Consensus 242 ~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~ 321 (895)
+ .++.++|||+|...+.+... .+......++++|++
T Consensus 155 ~---------------------~~~~~i~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~i~~ 190 (366)
T cd03822 155 P---------------------EKIAVIPHGVPDPPAEPPES-----------------------LKALGGLDGRPVLLT 190 (366)
T ss_pred C---------------------CcEEEeCCCCcCcccCCchh-----------------------hHhhcCCCCCeEEEE
Confidence 1 18999999999876643210 011222456789999
Q ss_pred EeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCC-CCCCcHH
Q 002665 322 LARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKH-HKQSDVP 399 (895)
Q Consensus 322 vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~-~~~~el~ 399 (895)
+||+.+.||++.+++|+..+.+.. +++.+ ++|.+....... .....+++.++++.++|.|.|. ++.+++.
T Consensus 191 ~G~~~~~K~~~~ll~a~~~~~~~~--~~~~l~i~G~~~~~~~~~------~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~ 262 (366)
T cd03822 191 FGLLRPYKGLELLLEALPLLVAKH--PDVRLLVAGETHPDLERY------RGEAYALAERLGLADRVIFINRYLPDEELP 262 (366)
T ss_pred EeeccCCCCHHHHHHHHHHHHhhC--CCeEEEEeccCccchhhh------hhhhHhHHHhcCCCCcEEEecCcCCHHHHH
Confidence 999999999999999999986543 34444 677665322211 0111144778899999999987 9999999
Q ss_pred HHHHHhhcCCcEEEecCCCC--CCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHhhCHHH
Q 002665 400 DIYRLAAKTKGVFINPAFIE--PFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQL 477 (895)
Q Consensus 400 ~ly~~a~~~~Dv~v~ps~~e--g~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~ 477 (895)
.+|+.| |++++|+..| ++|++++|||+||+|||+++.|+ .+.+.+..+|+++++.|+++++++|.+++++++.
T Consensus 263 ~~~~~a----d~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~~~~~~ 337 (366)
T cd03822 263 ELFSAA----DVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLLADPEL 337 (366)
T ss_pred HHHhhc----CEEEecccccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHHcChHH
Confidence 999999 9999999999 99999999999999999999999 6666777899999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Q 002665 478 WERCRQNGLKNIHQFSWPEHCKSYLSRIS 506 (895)
Q Consensus 478 ~~~~~~~~~~~v~~~s~~~~a~~~~~~l~ 506 (895)
+.++++++++.+++|||+.++++|.++|+
T Consensus 338 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 366 (366)
T cd03822 338 AQALRARAREYARAMSWERVAERYLRLLA 366 (366)
T ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHhC
Confidence 99999999999977999999999998873
No 50
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=100.00 E-value=7.1e-31 Score=294.38 Aligned_cols=336 Identities=20% Similarity=0.214 Sum_probs=241.2
Q ss_pred CCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhhcccCCCCCcEEEEecCCCCCccc
Q 002665 30 DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYV 109 (895)
Q Consensus 30 ~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~g~~i~r~~~~~~~~~l 109 (895)
..||.++++.+++++|++.| |+|++++...... .+... . ...++.+++++....
T Consensus 10 ~~GG~~~~~~~l~~~L~~~~--~~v~~i~~~~~~~----~~~~~---~-------------~~~~~~~~~~~~~~~---- 63 (358)
T cd03812 10 NRGGIETFIMNYYRNLDRSK--IQFDFLVTSKEEG----DYDDE---I-------------EKLGGKIYYIPARKK---- 63 (358)
T ss_pred CCccHHHHHHHHHHhcCccc--eEEEEEEeCCCCc----chHHH---H-------------HHcCCeEEEecCCCc----
Confidence 58999999999999999998 9999999752211 00000 0 113667766443211
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHHhccCCCCE-EEEeCCCchhhHHHH
Q 002665 110 QKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPM-VFTGHSLGRDKLEQL 188 (895)
Q Consensus 110 ~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~~~~~~ip~-v~t~H~~~~~~~~~~ 188 (895)
....+ +..+.+.+.+ .+||+||+|......++..+++..+.|. +++.|+.......
T Consensus 64 -------~~~~~-------~~~~~~~~~~-------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-- 120 (358)
T cd03812 64 -------NPLKY-------FKKLYKLIKK-------NKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDK-- 120 (358)
T ss_pred -------cHHHH-------HHHHHHHHhc-------CCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccccc--
Confidence 11111 1122222222 5799999998876666666666677775 6788876433210
Q ss_pred HHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEE
Q 002665 189 LKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVV 268 (895)
Q Consensus 189 ~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~v 268 (895)
... .... ...+...++.++.+++.|+...+.+... ..+. ++.+
T Consensus 121 -----~~~-----~~~~---~~~~~~~~~~~~~~i~~s~~~~~~~~~~---~~~~---------------------~~~v 163 (358)
T cd03812 121 -----KKK-----ILKY---KVLRKLINRLATDYLACSEEAGKWLFGK---VKNK---------------------KFKV 163 (358)
T ss_pred -----cch-----hhHH---HHHHHHHHhcCCEEEEcCHHHHHHHHhC---CCcc---------------------cEEE
Confidence 000 0000 1224556888999999999877765443 1121 8999
Q ss_pred eCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC
Q 002665 269 IPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA 348 (895)
Q Consensus 269 ip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~ 348 (895)
||||+|...|.+.... ..........++++.|+++||+.+.||++.+++|+..+.+..+..
T Consensus 164 i~ngvd~~~~~~~~~~-------------------~~~~~~~~~~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~~~~ 224 (358)
T cd03812 164 IPNGIDLEKFIFNEEI-------------------RKKRRELGILEDKFVIGHVGRFSEQKNHEFLIEIFAELLKKNPNA 224 (358)
T ss_pred EeccCcHHHcCCCchh-------------------hhHHHHcCCCCCCEEEEEEeccccccChHHHHHHHHHHHHhCCCe
Confidence 9999999877543211 011223334567899999999999999999999999997544433
Q ss_pred cEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHH
Q 002665 349 NLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEA 428 (895)
Q Consensus 349 ~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea 428 (895)
++ +++|+++.. ..+...++++++.++|.|.|+ .+++..+|+.| |++|+||..|++|++++||
T Consensus 225 ~l-~ivG~g~~~-----------~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a----di~v~ps~~E~~~~~~lEA 286 (358)
T cd03812 225 KL-LLVGDGELE-----------EEIKKKVKELGLEDKVIFLGV--RNDVPELLQAM----DVFLFPSLYEGLPLVLIEA 286 (358)
T ss_pred EE-EEEeCCchH-----------HHHHHHHHhcCCCCcEEEecc--cCCHHHHHHhc----CEEEecccccCCCHHHHHH
Confidence 33 477887743 344566778899999999998 68999999999 9999999999999999999
Q ss_pred HHcCCCEEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHhhCHHHHHHHHHHHHHHH
Q 002665 429 AAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNI 489 (895)
Q Consensus 429 ~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~v 489 (895)
||+|+|||+|+.||..|++.+ ..+++..+.++++++++|.+++++++.++.+...+....
T Consensus 287 ma~G~PvI~s~~~~~~~~i~~-~~~~~~~~~~~~~~a~~i~~l~~~~~~~~~~~~~~~~~~ 346 (358)
T cd03812 287 QASGLPCILSDTITKEVDLTD-LVKFLSLDESPEIWAEEILKLKSEDRRERSSESIKKKGL 346 (358)
T ss_pred HHhCCCEEEEcCCchhhhhcc-CccEEeCCCCHHHHHHHHHHHHhCcchhhhhhhhhhccc
Confidence 999999999999999999987 556666677899999999999999998888877777665
No 51
>PRK10125 putative glycosyl transferase; Provisional
Probab=100.00 E-value=9.9e-31 Score=295.77 Aligned_cols=368 Identities=12% Similarity=0.100 Sum_probs=229.2
Q ss_pred eEEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhh
Q 002665 7 NMKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLM 86 (895)
Q Consensus 7 ~~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 86 (895)
|||++|.--. ..||+++.+.+|++.|.++| |+|.++......+.... .
T Consensus 1 mkil~i~~~l-------------~~GGaeri~~~L~~~l~~~G--~~~~i~~~~~~~~~~~~--------~--------- 48 (405)
T PRK10125 1 MNILQFNVRL-------------AEGGAAGVALDLHQRALQQG--LASHFVYGYGKGGKESV--------S--------- 48 (405)
T ss_pred CeEEEEEeee-------------cCCchhHHHHHHHHHHHhcC--CeEEEEEecCCCccccc--------c---------
Confidence 7999998422 37999999999999999999 99999988633222110 0
Q ss_pred cccCCCCCc-EEEEecCCCCCccccccccCCCchh-HHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHH-
Q 002665 87 QGLGESSGA-YIIRIPFGPKDKYVQKELLWPHIPE-FVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAA- 163 (895)
Q Consensus 87 ~~~~~~~g~-~i~r~~~~~~~~~l~k~~~~~~l~~-f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~- 163 (895)
...+ .++++.. . ....... . +.+ |-...........+.+.+ ..+|||||.|....+++..
T Consensus 49 -----~~~~~~~~~~~~--~--~~~~~~~-~-~~~~~~~~~~~~~~~~~~~i~~------~~~pDviHlH~~~~~~~~~~ 111 (405)
T PRK10125 49 -----HQNYPQVIKHTP--R--MTAMANI-A-LFRLFNRDLFGNFNELYRTITR------TPGPVVLHFHVLHSYWLNLK 111 (405)
T ss_pred -----cCCcceEEEecc--c--HHHHHHH-H-HHHhcchhhcchHHHHHHHHhh------ccCCCEEEEecccCceecHH
Confidence 0111 1111110 0 0000000 0 000 000001111122222211 1579999999765432211
Q ss_pred --------HHhccCCCCEEEEeCCCchhh--------HHHHHHhCCCChhh--------hhhHhh-HHHhHHHHHhhccc
Q 002665 164 --------LLSGALNVPMVFTGHSLGRDK--------LEQLLKQGRLSRDE--------INTTYK-IMRRIEAEELSLDA 218 (895)
Q Consensus 164 --------~~~~~~~ip~v~t~H~~~~~~--------~~~~~~~g~~~~~~--------~~~~~~-~~~r~~~e~~~~~~ 218 (895)
...+..++|+|+|.||.|+.. ...+..... ..+. .....+ +.++...-...++.
T Consensus 112 ~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~-~Cp~l~~~~~~~~d~~~~~~~~k~~~~~~~~~~ 190 (405)
T PRK10125 112 SVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQ-KCPTLNNYPPVKVDRAHQLVAGKRQLFREMLAL 190 (405)
T ss_pred HHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCC-CCCCccCCCCCccchHHHHHHHHHHHHHHHhhc
Confidence 113355899999999998552 111111110 0000 011111 11111112223456
Q ss_pred cCEEEecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCC
Q 002665 219 SEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPAS 298 (895)
Q Consensus 219 ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~ 298 (895)
++.+|++|+...+.+...++. .++.|||||||+..+.+.....
T Consensus 191 ~~~iV~~S~~l~~~~~~~~~~------------------------~~i~vI~NGid~~~~~~~~~~~------------- 233 (405)
T PRK10125 191 GCQFISPSQHVADAFNSLYGP------------------------GRCRIINNGIDMATEAILAELP------------- 233 (405)
T ss_pred CcEEEEcCHHHHHHHHHHcCC------------------------CCEEEeCCCcCccccccccccc-------------
Confidence 789999999887765444432 1899999999975432211000
Q ss_pred CCCchhhhhhhccCCCCCcEEEEEeC-C-CCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCchhhhhhhHHHHHHHH
Q 002665 299 PDPPIWSEIMHFFSNPRKPMILALAR-P-DPKKNITTLVKAFGECRPLRELANLT-LIMGNRDDIDEMSGTNAALLLSIL 375 (895)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~Il~vgr-l-~~~Kgi~~ll~A~~~l~~~~~~~~l~-livG~~~~~~~l~~~~~~~~~~i~ 375 (895)
.....+++++|+++|+ + .+.||++.+++|+..+. + ++. +++|.++...
T Consensus 234 ----------~~~~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~---~--~~~L~ivG~g~~~~-------------- 284 (405)
T PRK10125 234 ----------PVRETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG---D--KIELHTFGKFSPFT-------------- 284 (405)
T ss_pred ----------ccccCCCCCEEEEEEeccccCCccHHHHHHHHHhCC---C--CeEEEEEcCCCccc--------------
Confidence 0001246789999999 4 47899999999999862 2 344 4677764210
Q ss_pred HHHHHcCCCCCEEeCCCC-CCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceE
Q 002665 376 KLIDKYDLYGQVAYPKHH-KQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGL 454 (895)
Q Consensus 376 ~~~~~~~l~~~v~~~g~~-~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~ 454 (895)
...+.++|.. +.+++..+|+.| |+||+||..|+||++++||||||+|||+|+.||.+|++.+. +|+
T Consensus 285 --------~~~v~~~g~~~~~~~l~~~y~~a----DvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~~-~G~ 351 (405)
T PRK10125 285 --------AGNVVNHGFETDKRKLMSALNQM----DALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKS-GGK 351 (405)
T ss_pred --------ccceEEecCcCCHHHHHHHHHhC----CEEEECCccccCcCHHHHHHHcCCCEEEeCCCChHHhEeCC-cEE
Confidence 1357777765 446899999999 99999999999999999999999999999999999999764 899
Q ss_pred EeCCCCHHHHHHHHHHHhhCHHHHHH----HHHHHHHHH-hhCCHHHHHHHHHHHHHHh
Q 002665 455 LVDPHDQQSIADALLKLVSDKQLWER----CRQNGLKNI-HQFSWPEHCKSYLSRISSC 508 (895)
Q Consensus 455 lv~p~d~~~la~ai~~ll~~~~~~~~----~~~~~~~~v-~~~s~~~~a~~~~~~l~~~ 508 (895)
+|+|.|++++++++ +++..++ ..+++++.+ ++|||+.++++|+++|+++
T Consensus 352 lv~~~d~~~La~~~-----~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~l 405 (405)
T PRK10125 352 TVSEEEVLQLAQLS-----KPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL 405 (405)
T ss_pred EECCCCHHHHHhcc-----CHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 99999999999854 3333222 235577777 6899999999999999864
No 52
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=100.00 E-value=1.9e-30 Score=290.86 Aligned_cols=345 Identities=21% Similarity=0.274 Sum_probs=243.1
Q ss_pred CCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhhcccCCCCCcEEEEecCCCCCcccc
Q 002665 31 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQ 110 (895)
Q Consensus 31 ~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~g~~i~r~~~~~~~~~l~ 110 (895)
.||.++++.+|+++|.++| |+|++++.... +.. +... .......++....
T Consensus 11 ~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~-~~~--------~~~~--------------~~~~~~~~~~~~~----- 60 (360)
T cd04951 11 LGGAEKQVVDLADQFVAKG--HQVAIISLTGE-SEV--------KPPI--------------DATIILNLNMSKN----- 60 (360)
T ss_pred CCCHHHHHHHHHHhcccCC--ceEEEEEEeCC-CCc--------cchh--------------hccceEEeccccc-----
Confidence 7999999999999999999 99999986421 100 0000 0111112221100
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHHhcc-CCCCEEEEeCCCchhhHHHHH
Q 002665 111 KELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGA-LNVPMVFTGHSLGRDKLEQLL 189 (895)
Q Consensus 111 k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~~~~-~~ip~v~t~H~~~~~~~~~~~ 189 (895)
.+ .+ +..+..+.+.+++ .+||+||+|...+..++..++.. .++|++++.|+......
T Consensus 61 ---~~----~~----~~~~~~~~~~~~~-------~~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~---- 118 (360)
T cd04951 61 ---PL----SF----LLALWKLRKILRQ-------FKPDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGR---- 118 (360)
T ss_pred ---ch----hh----HHHHHHHHHHHHh-------cCCCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhH----
Confidence 00 11 1112222233333 57999999987665555544443 46789999998743210
Q ss_pred HhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEe
Q 002665 190 KQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVI 269 (895)
Q Consensus 190 ~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vi 269 (895)
...+. .+.....++.+++.|+...+.+..... ..+ .++.++
T Consensus 119 ------------~~~~~-----~~~~~~~~~~~~~~s~~~~~~~~~~~~-~~~---------------------~~~~~i 159 (360)
T cd04951 119 ------------LRMLA-----YRLTDFLSDLTTNVSKEALDYFIASKA-FNA---------------------NKSFVV 159 (360)
T ss_pred ------------HHHHH-----HHHHhhccCceEEEcHHHHHHHHhccC-CCc---------------------ccEEEE
Confidence 00011 122344577888888877666544321 122 289999
Q ss_pred CCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc
Q 002665 270 PPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELAN 349 (895)
Q Consensus 270 p~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~ 349 (895)
|||+|...|.+... ........+...+++++++++||+.+.||++.+++|+.++.+.. ++
T Consensus 160 ~ng~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~--~~ 219 (360)
T cd04951 160 YNGIDTDRFRKDPA------------------RRLKIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFAKLLSDY--LD 219 (360)
T ss_pred ccccchhhcCcchH------------------HHHHHHHHcCcCCCCEEEEEEeeCchhcCcHHHHHHHHHHHhhC--CC
Confidence 99999887754321 11122333444567889999999999999999999999986544 34
Q ss_pred EEE-EEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHH
Q 002665 350 LTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEA 428 (895)
Q Consensus 350 l~l-ivG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea 428 (895)
+.+ ++|+++.. ..+.+.+.++++.+++.|.|++ +++..+|+.| |++++||..|+||++++||
T Consensus 220 ~~l~i~G~g~~~-----------~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~a----d~~v~~s~~e~~~~~~~Ea 282 (360)
T cd04951 220 IKLLIAGDGPLR-----------ATLERLIKALGLSNRVKLLGLR--DDIAAYYNAA----DLFVLSSAWEGFGLVVAEA 282 (360)
T ss_pred eEEEEEcCCCcH-----------HHHHHHHHhcCCCCcEEEeccc--ccHHHHHHhh----ceEEecccccCCChHHHHH
Confidence 444 77877643 3344667778888899999974 7899999999 9999999999999999999
Q ss_pred HHcCCCEEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHhh-CHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHHHH
Q 002665 429 AAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVS-DKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRIS 506 (895)
Q Consensus 429 ~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~-~~~~~~~~~~~~~~~v-~~~s~~~~a~~~~~~l~ 506 (895)
|++|+|||+++.|+..|++.+ +|++++++|+++++++|.++++ +++.+..+.++ ++.+ ++|||+.++++|.++|+
T Consensus 283 ~a~G~PvI~~~~~~~~e~i~~--~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 283 MACELPVVATDAGGVREVVGD--SGLIVPISDPEALANKIDEILKMSGEERDIIGAR-RERIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred HHcCCCEEEecCCChhhEecC--CceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHH-HHHHHHhcCHHHHHHHHHHHhh
Confidence 999999999999999999875 7999999999999999999995 66666666666 6666 79999999999999986
No 53
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=100.00 E-value=1.6e-30 Score=290.84 Aligned_cols=268 Identities=23% Similarity=0.336 Sum_probs=216.6
Q ss_pred CCCcEEEeccCC-chHHHHHHhccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEe
Q 002665 146 IWPVAIHGHYAD-AGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVIT 224 (895)
Q Consensus 146 ~~pDvIh~h~~~-~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~ 224 (895)
.+||+||+|+.. ...++...++..++|++++.|+...... . . . ..+...++.+|.+++
T Consensus 78 ~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~------~-------~~~~~~~~~~~~vi~ 136 (355)
T cd03799 78 LGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRS-------P-D------A-------IDLDEKLARADFVVA 136 (355)
T ss_pred cCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEeccccccc-------C-c------h-------HHHHHHHhhCCEEEE
Confidence 569999999874 4444555555568999999996522110 0 0 0 124456889999999
Q ss_pred cCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchh
Q 002665 225 STRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIW 304 (895)
Q Consensus 225 ~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (895)
.|+...+.+...++. .. .++.++|||+|.+.|.+...
T Consensus 137 ~s~~~~~~l~~~~~~-~~---------------------~~~~vi~~~~d~~~~~~~~~--------------------- 173 (355)
T cd03799 137 ISEYNRQQLIRLLGC-DP---------------------DKIHVVHCGVDLERFPPRPP--------------------- 173 (355)
T ss_pred CCHHHHHHHHHhcCC-Cc---------------------ccEEEEeCCcCHHHcCCccc---------------------
Confidence 999888776665422 22 28999999999887754220
Q ss_pred hhhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhhhHHHHHHHHHHHHHcCC
Q 002665 305 SEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDL 383 (895)
Q Consensus 305 ~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~l~~~~~~~~~~i~~~~~~~~l 383 (895)
....+++.|+++|++.+.||++.+++++..+... .+++.+ ++|.++.. ..+...+.++++
T Consensus 174 ------~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~--~~~~~l~i~G~~~~~-----------~~~~~~~~~~~~ 234 (355)
T cd03799 174 ------PPPGEPLRILSVGRLVEKKGLDYLLEALALLKDR--GIDFRLDIVGDGPLR-----------DELEALIAELGL 234 (355)
T ss_pred ------cccCCCeEEEEEeeeccccCHHHHHHHHHHHhhc--CCCeEEEEEECCccH-----------HHHHHHHHHcCC
Confidence 0124567899999999999999999999998653 345554 77877653 334466777888
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCC------CCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeC
Q 002665 384 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFI------EPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVD 457 (895)
Q Consensus 384 ~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~------eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~ 457 (895)
.++|.|.|+++.+++..+|+.| |++++|+.. |+||++++|||+||+|||+++.|+..+++.++.+|++++
T Consensus 235 ~~~v~~~g~~~~~~l~~~~~~a----di~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~ 310 (355)
T cd03799 235 EDRVTLLGAKSQEEVRELLRAA----DLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVP 310 (355)
T ss_pred CCeEEECCcCChHHHHHHHHhC----CEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEeC
Confidence 8999999999999999999999 999999998 999999999999999999999999999999888999999
Q ss_pred CCCHHHHHHHHHHHhhCHHHHHHHHHHHHHHH-hhCCHHHHHHH
Q 002665 458 PHDQQSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKS 500 (895)
Q Consensus 458 p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~v-~~~s~~~~a~~ 500 (895)
+.|+++++++|.+++++++.+..+++++++.+ ++|||+..+++
T Consensus 311 ~~~~~~l~~~i~~~~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~ 354 (355)
T cd03799 311 PGDPEALADAIERLLDDPELRREMGEAGRARVEEEFDIRKQAAR 354 (355)
T ss_pred CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHhhc
Confidence 99999999999999999999999999999999 69999998865
No 54
>PLN02949 transferase, transferring glycosyl groups
Probab=100.00 E-value=7.2e-30 Score=291.45 Aligned_cols=390 Identities=16% Similarity=0.175 Sum_probs=257.5
Q ss_pred CCchhhHHHHHHHHHhcCCCcc--eEEEeeccccCCCCCCCCCccccccccccchhhhcccCCCCCcEEEEecCCCCCcc
Q 002665 31 TGGQVKYVVELARALGSMPGVY--RVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKY 108 (895)
Q Consensus 31 ~GG~~~~v~~La~~L~~~g~~~--~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~g~~i~r~~~~~~~~~ 108 (895)
-||.++.+++.+++|.+.| + .|+|+|...+ + .. .+.+..... .-.++-......+++..+ .+
T Consensus 46 ggG~ERvl~~a~~~l~~~~--~~~~v~iyt~~~d-~----~~---~~~l~~~~~---~~~i~~~~~~~~v~l~~~---~~ 109 (463)
T PLN02949 46 GGGGERVLWCAVRAIQEEN--PDLDCVIYTGDHD-A----SP---DSLAARARD---RFGVELLSPPKVVHLRKR---KW 109 (463)
T ss_pred CCChhhHHHHHHHHHHhhC--CCCeEEEEcCCCC-C----CH---HHHHHHHHh---hcceecCCCceEEEeccc---cc
Confidence 4599999999999999998 6 8888887632 1 11 111100000 000111112233333221 23
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccC--CchHHHHHHhccCCCCEEEEeCCCchhh--
Q 002665 109 VQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYA--DAGDAAALLSGALNVPMVFTGHSLGRDK-- 184 (895)
Q Consensus 109 l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~--~~~~~~~~~~~~~~ip~v~t~H~~~~~~-- 184 (895)
+ ....|+++.-+.. .+..+....+.+.. ..|||+ +... +..+. +.+..++|+++++|-..-..
T Consensus 110 ~-~~~~~~~~t~~~~-~~~~~~l~~~~~~~-------~~p~v~-vDt~~~~~~~p---l~~~~~~~v~~yvH~p~~~~dm 176 (463)
T PLN02949 110 I-EEETYPRFTMIGQ-SLGSVYLAWEALCK-------FTPLYF-FDTSGYAFTYP---LARLFGCKVVCYTHYPTISSDM 176 (463)
T ss_pred c-ccccCCceehHHH-HHHHHHHHHHHHHh-------cCCCEE-EeCCCcccHHH---HHHhcCCcEEEEEeCCcchHHH
Confidence 3 3334666544322 22333222333322 236544 4322 12222 22345899999999432111
Q ss_pred HHHHHHhCC--------CCh-hhhhhHhhHHHhHH--HHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHHHHHhHh
Q 002665 185 LEQLLKQGR--------LSR-DEINTTYKIMRRIE--AEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIK 253 (895)
Q Consensus 185 ~~~~~~~g~--------~~~-~~~~~~~~~~~r~~--~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~ 253 (895)
.... ..+. ... .......+++++.. .++.+.+.||.|+++|+...+.+.+.+.. +
T Consensus 177 ~~~v-~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~~~~~--~----------- 242 (463)
T PLN02949 177 ISRV-RDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEALWRI--P----------- 242 (463)
T ss_pred HHHH-hhcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHHHcCC--C-----------
Confidence 1111 0000 000 00011112222221 47778899999999999887776554432 1
Q ss_pred ccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCCCCCCCHHH
Q 002665 254 RGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITT 333 (895)
Q Consensus 254 ~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ 333 (895)
.++.+++||+|...+...... ..+++++++++||+.+.||++.
T Consensus 243 ----------~~i~vvyp~vd~~~~~~~~~~---------------------------~~~~~~~il~vGR~~~~Kg~~l 285 (463)
T PLN02949 243 ----------ERIKRVYPPCDTSGLQALPLE---------------------------RSEDPPYIISVAQFRPEKAHAL 285 (463)
T ss_pred ----------CCeEEEcCCCCHHHcccCCcc---------------------------ccCCCCEEEEEEeeeccCCHHH
Confidence 178999999998765321100 0234678999999999999999
Q ss_pred HHHHHHhccccc--CCCcEEE-EEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCc
Q 002665 334 LVKAFGECRPLR--ELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKG 410 (895)
Q Consensus 334 ll~A~~~l~~~~--~~~~l~l-ivG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~D 410 (895)
+|+||.++.+.. ..+++.| ++|++... +..++..++.++++++++.++|.|.|+++.+++..+|+.| |
T Consensus 286 lI~A~~~l~~~~~~~~~~~~LvIvG~~~~~-----~~~~~~~eL~~la~~l~L~~~V~f~g~v~~~el~~ll~~a----~ 356 (463)
T PLN02949 286 QLEAFALALEKLDADVPRPKLQFVGSCRNK-----EDEERLQKLKDRAKELGLDGDVEFHKNVSYRDLVRLLGGA----V 356 (463)
T ss_pred HHHHHHHHHHhccccCCCcEEEEEeCCCCc-----ccHHHHHHHHHHHHHcCCCCcEEEeCCCCHHHHHHHHHhC----c
Confidence 999999875421 1234444 67776421 1234567788999999999999999999999999999999 9
Q ss_pred EEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcc-ccccc---CCceEEeCCCCHHHHHHHHHHHhh-CHHHHHHHHHHH
Q 002665 411 VFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV-DIHRV---LDNGLLVDPHDQQSIADALLKLVS-DKQLWERCRQNG 485 (895)
Q Consensus 411 v~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~-eiv~~---~~~g~lv~p~d~~~la~ai~~ll~-~~~~~~~~~~~~ 485 (895)
++++|+..|+||++++||||||+|||+++.||+. |++.+ +.+|++++ |+++++++|.++++ ++++++++++++
T Consensus 357 ~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll~~~~~~r~~m~~~a 434 (463)
T PLN02949 357 AGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVLRMRETERLEIAAAA 434 (463)
T ss_pred EEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999975 77764 55798885 99999999999998 688899999999
Q ss_pred HHHHhhCCHHHHHHHHHHHHHHhhhc
Q 002665 486 LKNIHQFSWPEHCKSYLSRISSCKQR 511 (895)
Q Consensus 486 ~~~v~~~s~~~~a~~~~~~l~~~~~~ 511 (895)
++.+++|||+..++++.+.++++++.
T Consensus 435 r~~~~~FS~e~~~~~~~~~i~~l~~~ 460 (463)
T PLN02949 435 RKRANRFSEQRFNEDFKDAIRPILNS 460 (463)
T ss_pred HHHHHHcCHHHHHHHHHHHHHHHHhh
Confidence 99998899999999999999988753
No 55
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=100.00 E-value=3e-30 Score=294.20 Aligned_cols=375 Identities=18% Similarity=0.224 Sum_probs=249.8
Q ss_pred CCchhhHHHHHHHHHhcC--CCcceEEEeeccccCCCCCCCCCccccccccccchhhhcccCCCCCcEEEEec-CCCCCc
Q 002665 31 TGGQVKYVVELARALGSM--PGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIP-FGPKDK 107 (895)
Q Consensus 31 ~GG~~~~v~~La~~L~~~--g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~g~~i~r~~-~~~~~~ 107 (895)
-||.++.+++.+.+|.+. + |+|+|+|....... . +.+.. ....-.++..+++.++++. .+ .
T Consensus 13 ggg~ervl~~a~~~l~~~~~~--~~v~i~t~~~~~~~-----~---~~l~~---~~~~f~~~~~~~~~~~~~~~~~---~ 76 (419)
T cd03806 13 GGGGERVLWCAVRALQKRYPN--NIVVIYTGDLDATP-----E---EILEK---VESRFNIELDRPRIVFFLLKYR---K 76 (419)
T ss_pred CCCchHHHHHHHHHHHHhCCC--cEEEEECCCCCCCH-----H---HHHHH---HHHhcCeecCCCceEEEEecce---e
Confidence 459999999999999998 5 89999998743210 0 00000 0000112223567766653 21 1
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEecc-CCchHHHHHHhccCCCCEEEEeCCCch----
Q 002665 108 YVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHY-ADAGDAAALLSGALNVPMVFTGHSLGR---- 182 (895)
Q Consensus 108 ~l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~-~~~~~~~~~~~~~~~ip~v~t~H~~~~---- 182 (895)
++ ....|+++..+...+...+.. .+.+.. .+||||..|. +..++....+ ..++|+|+.+| ++
T Consensus 77 ~~-~~~~~~r~~~~~~~~~~~~~~-~~~~~~-------~~pDv~i~~~g~~~~~~~~~~--~~~~~~i~y~h--~P~~~~ 143 (419)
T cd03806 77 LV-EASTYPRFTLLGQALGSMILG-LEALLK-------LVPDIFIDTMGYPFTYPLVRL--LGGCPVGAYVH--YPTIST 143 (419)
T ss_pred ee-ccccCCceeeHHHHHHHHHHH-HHHHHh-------cCCCEEEEcCCcccHHHHHHH--hcCCeEEEEec--CCcchH
Confidence 12 223455543332222211111 122211 3599998886 4443333222 22789999999 44
Q ss_pred hhHHHHHHhCC--------CChh----hhhhHh-hHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHHHH
Q 002665 183 DKLEQLLKQGR--------LSRD----EINTTY-KIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLR 249 (895)
Q Consensus 183 ~~~~~~~~~g~--------~~~~----~~~~~~-~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~ 249 (895)
+.... +..+. +... .+...| +++.+ .|...++.||.++++|+...+.+.+.+...
T Consensus 144 d~l~~-~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~--~~~~~~~~aD~ii~~S~~~~~~~~~~~~~~--------- 211 (419)
T cd03806 144 DMLQK-VRSREASYNNSATIARSPVLSKAKLLYYRLFAF--LYGLAGSFADVVMVNSTWTRNHIRSLWKRN--------- 211 (419)
T ss_pred HHHHH-HhhccccccCccchhccchHHHHHHHHHHHHHH--HHHHHhhcCCEEEECCHHHHHHHHHHhCcC---------
Confidence 33221 11111 1111 111111 12222 488899999999999998777665544321
Q ss_pred HhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCCCCCC
Q 002665 250 ARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKK 329 (895)
Q Consensus 250 ~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl~~~K 329 (895)
.++.+||||+|++.|.+.... ...++++|+++||+.+.|
T Consensus 212 --------------~~~~vi~~gvd~~~~~~~~~~---------------------------~~~~~~~il~vgr~~~~K 250 (419)
T cd03806 212 --------------TKPSIVYPPCDVEELLKLPLD---------------------------EKTRENQILSIAQFRPEK 250 (419)
T ss_pred --------------CCcEEEcCCCCHHHhcccccc---------------------------cccCCcEEEEEEeecCCC
Confidence 178999999998877542210 124568999999999999
Q ss_pred CHHHHHHHHHhcccccCC---CcEEE-EEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHh
Q 002665 330 NITTLVKAFGECRPLREL---ANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLA 405 (895)
Q Consensus 330 gi~~ll~A~~~l~~~~~~---~~l~l-ivG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a 405 (895)
|++.+|+||..+.+..+. +++.+ ++|++...+ ..++...+.++++++++.++|.|.|.++.+++..+|+.|
T Consensus 251 ~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~-----~~~~~~~L~~~~~~l~l~~~V~f~g~v~~~~l~~~l~~a 325 (419)
T cd03806 251 NHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNED-----DEKRVEDLKLLAKELGLEDKVEFVVNAPFEELLEELSTA 325 (419)
T ss_pred CHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcc-----cHHHHHHHHHHHHHhCCCCeEEEecCCCHHHHHHHHHhC
Confidence 999999999999754443 34554 667654211 123567788899999999999999999999999999999
Q ss_pred hcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCc-ccccc---cCCceEEeCCCCHHHHHHHHHHHhhCH-HHHHH
Q 002665 406 AKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGP-VDIHR---VLDNGLLVDPHDQQSIADALLKLVSDK-QLWER 480 (895)
Q Consensus 406 ~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~-~eiv~---~~~~g~lv~p~d~~~la~ai~~ll~~~-~~~~~ 480 (895)
|++|+|+..|+||++++||||||+|||+++.||+ .|++. ++.+|++++ |+++++++|.++++++ +.++.
T Consensus 326 ----dv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~~~~~~~~~ 399 (419)
T cd03806 326 ----SIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKILSLSEEERLR 399 (419)
T ss_pred ----eEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC--CHHHHHHHHHHHHhCCHHHHHH
Confidence 9999999999999999999999999999998775 57887 788999985 9999999999999955 44555
Q ss_pred HHHHHHHHHhhCCHHHHH
Q 002665 481 CRQNGLKNIHQFSWPEHC 498 (895)
Q Consensus 481 ~~~~~~~~v~~~s~~~~a 498 (895)
+.+++++..++|||+...
T Consensus 400 ~~~~~~~~~~~fs~~~f~ 417 (419)
T cd03806 400 IRRAARSSVKRFSDEEFE 417 (419)
T ss_pred HHHHHHHHHHhhCHHHhc
Confidence 544445444799998764
No 56
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=100.00 E-value=4.4e-32 Score=278.61 Aligned_cols=366 Identities=19% Similarity=0.233 Sum_probs=265.9
Q ss_pred eEEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhh
Q 002665 7 NMKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLM 86 (895)
Q Consensus 7 ~~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 86 (895)
++|+|+|.|.+ |.+||.+.+++.|++.|.+.| |.|.++|-.+.+- .+...+
T Consensus 1 ~~i~mVsdff~-----------P~~ggveshiy~lSq~li~lg--hkVvvithayg~r-------~giryl--------- 51 (426)
T KOG1111|consen 1 SRILMVSDFFY-----------PSTGGVESHIYALSQCLIRLG--HKVVVITHAYGNR-------VGIRYL--------- 51 (426)
T ss_pred CcceeeCcccc-----------cCCCChhhhHHHhhcchhhcC--CeEEEEeccccCc-------cceeee---------
Confidence 47999999999 999999999999999999999 9999999874321 223333
Q ss_pred cccCCCCCcEEEEecCCCCCccccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHH--HHH
Q 002665 87 QGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDA--AAL 164 (895)
Q Consensus 87 ~~~~~~~g~~i~r~~~~~~~~~l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~--~~~ 164 (895)
.+|+.++.+|.... -.....|-+..... +++.+ .++ ++..+||.|..++... +..
T Consensus 52 -----t~glkVyylp~~v~----~n~tT~ptv~~~~P-llr~i-----~lr--------E~I~ivhghs~fS~lahe~l~ 108 (426)
T KOG1111|consen 52 -----TNGLKVYYLPAVVG----YNQTTFPTVFSDFP-LLRPI-----LLR--------ERIEIVHGHSPFSYLAHEALM 108 (426)
T ss_pred -----cCCceEEEEeeeee----ecccchhhhhccCc-ccchh-----hhh--------hceEEEecCChHHHHHHHHHH
Confidence 25788888887422 12222222211100 11111 111 3588999998754433 667
Q ss_pred HhccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHH
Q 002665 165 LSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVL 244 (895)
Q Consensus 165 ~~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~ 244 (895)
.++.+|.+.|||-|+++.-.-. |. +. .+ ..-...+...|.+||+|....+.. -......|.
T Consensus 109 hartMGlktVfTdHSlfGfad~-----~s-----i~--~n-----~ll~~sL~~id~~IcVshtskent-vlr~~L~p~- 169 (426)
T KOG1111|consen 109 HARTMGLKTVFTDHSLFGFADI-----GS-----IL--TN-----KLLPLSLANIDRIICVSHTSKENT-VLRGALAPA- 169 (426)
T ss_pred HHHhcCceEEEeccccccccch-----hh-----hh--hc-----ceeeeeecCCCcEEEEeecCCCce-EEEeccCHh-
Confidence 8888999999999997432210 10 00 00 012346788999999876433221 122333443
Q ss_pred HHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeC
Q 002665 245 ERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALAR 324 (895)
Q Consensus 245 ~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgr 324 (895)
++.+|||.+++..|.|..... ...+...|+.++|
T Consensus 170 --------------------kvsvIPnAv~~~~f~P~~~~~--------------------------~S~~i~~ivv~sR 203 (426)
T KOG1111|consen 170 --------------------KVSVIPNAVVTHTFTPDAADK--------------------------PSADIITIVVASR 203 (426)
T ss_pred --------------------HeeeccceeeccccccCcccc--------------------------CCCCeeEEEEEee
Confidence 999999999999998854221 0123478999999
Q ss_pred CCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHH
Q 002665 325 PDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYR 403 (895)
Q Consensus 325 l~~~Kgi~~ll~A~~~l~~~~~~~~l~-livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~ 403 (895)
|.++||++.+++++.++.+. .|++. +|+|+||....+ ++..+++.++.+|.++|.++.+++...|.
T Consensus 204 LvyrKGiDll~~iIp~vc~~--~p~vrfii~GDGPk~i~l-----------ee~lEk~~l~~rV~~lG~v~h~~Vr~vl~ 270 (426)
T KOG1111|consen 204 LVYRKGIDLLLEIIPSVCDK--HPEVRFIIIGDGPKRIDL-----------EEMLEKLFLQDRVVMLGTVPHDRVRDVLV 270 (426)
T ss_pred eeeccchHHHHHHHHHHHhc--CCCeeEEEecCCcccchH-----------HHHHHHhhccCceEEecccchHHHHHHHh
Confidence 99999999999999999654 45555 478999865444 36678889999999999999999999999
Q ss_pred HhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHhhCHHHHHHHHH
Q 002665 404 LAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQ 483 (895)
Q Consensus 404 ~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~ 483 (895)
.- |+|++||+.|.|+++++||++||+|||+|.+||..|++.+. -+.....++++++++++++++.-... -.
T Consensus 271 ~G----~IFlntSlTEafc~~ivEAaScGL~VVsTrVGGIpeVLP~d--~i~~~~~~~~dl~~~v~~ai~~~~~~---p~ 341 (426)
T KOG1111|consen 271 RG----DIFLNTSLTEAFCMVIVEAASCGLPVVSTRVGGIPEVLPED--MITLGEPGPDDLVGAVEKAITKLRTL---PL 341 (426)
T ss_pred cC----cEEeccHHHHHHHHHHHHHHhCCCEEEEeecCCccccCCcc--ceeccCCChHHHHHHHHHHHHHhccC---ch
Confidence 99 99999999999999999999999999999999999998643 34456668999999999888622111 23
Q ss_pred HHHHHH-hhCCHHHHHHHHHHHHHHhhhc
Q 002665 484 NGLKNI-HQFSWPEHCKSYLSRISSCKQR 511 (895)
Q Consensus 484 ~~~~~v-~~~s~~~~a~~~~~~l~~~~~~ 511 (895)
...+++ +.|+|...+++..+.|.++...
T Consensus 342 ~~h~~v~~~y~w~dVa~rTekvy~r~~~t 370 (426)
T KOG1111|consen 342 EFHDRVKKMYSWKDVAERTEKVYDRAATT 370 (426)
T ss_pred hHHHHHHHhccHHHHHHHHHHHHHHHhhc
Confidence 334556 5799999999999999988754
No 57
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=100.00 E-value=4e-30 Score=287.00 Aligned_cols=351 Identities=22% Similarity=0.292 Sum_probs=256.0
Q ss_pred CCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhhcccCCCCCcEEEEecCCCCCcccc
Q 002665 31 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQ 110 (895)
Q Consensus 31 ~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~g~~i~r~~~~~~~~~l~ 110 (895)
.||.++++..|+++|.+.| ++|.+++.....+ ....+ ...+++++.++....
T Consensus 11 ~gG~~~~~~~l~~~l~~~~--~~v~~~~~~~~~~--------~~~~~-------------~~~~i~v~~~~~~~~----- 62 (365)
T cd03807 11 VGGAERMLVRLLKGLDRDR--FEHVVISLTDRGE--------LGEEL-------------EEAGVPVYCLGKRPG----- 62 (365)
T ss_pred CccHHHHHHHHHHHhhhcc--ceEEEEecCcchh--------hhHHH-------------HhcCCeEEEEecccc-----
Confidence 4999999999999999998 9999998752211 00001 113777777664321
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHHhcc-CCCCEEEEeCCCchhhHHHHH
Q 002665 111 KELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGA-LNVPMVFTGHSLGRDKLEQLL 189 (895)
Q Consensus 111 k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~~~~-~~ip~v~t~H~~~~~~~~~~~ 189 (895)
+.. ..+...+. +.+.+ .+||+||+|.......+...+.. .++|++++.|+......
T Consensus 63 ----~~~-~~~~~~~~-------~~~~~-------~~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---- 119 (365)
T cd03807 63 ----RPD-PGALLRLY-------KLIRR-------LRPDVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLG---- 119 (365)
T ss_pred ----ccc-HHHHHHHH-------HHHHh-------hCCCEEEeccccccHHHHHHHHhcCCCcEEEEecCCccccc----
Confidence 011 11112222 22222 57999999987666665555555 68999999998755421
Q ss_pred HhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEe
Q 002665 190 KQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVI 269 (895)
Q Consensus 190 ~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vi 269 (895)
+. ......+ .+....+.++.+++.|+...+.+.. + .+... ++.++
T Consensus 120 --~~--------~~~~~~~--~~~~~~~~~~~~i~~s~~~~~~~~~-~-~~~~~---------------------~~~vi 164 (365)
T cd03807 120 --KK--------STRLVAR--LRRLLSSFIPLIVANSAAAAEYHQA-I-GYPPK---------------------KIVVI 164 (365)
T ss_pred --ch--------hHhHHHH--HHHHhccccCeEEeccHHHHHHHHH-c-CCChh---------------------heeEe
Confidence 00 0111111 2445677899999999876665433 2 22222 88999
Q ss_pred CCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc
Q 002665 270 PPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELAN 349 (895)
Q Consensus 270 p~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~ 349 (895)
|||+|...|.+.... ....++++..+++.++|+++||+.+.||++.+++|+..+.+. .++
T Consensus 165 ~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~--~~~ 224 (365)
T cd03807 165 PNGVDTERFSPDLDA------------------RARLREELGLPEDTFLIGIVARLHPQKDHATLLRAAALLLKK--FPN 224 (365)
T ss_pred CCCcCHHhcCCcccc------------------hHHHHHhcCCCCCCeEEEEecccchhcCHHHHHHHHHHHHHh--CCC
Confidence 999998877543211 111223444556788999999999999999999999998654 344
Q ss_pred EEE-EEecCCCchhhhhhhHHHHHHHHHHH-HHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHH
Q 002665 350 LTL-IMGNRDDIDEMSGTNAALLLSILKLI-DKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIE 427 (895)
Q Consensus 350 l~l-ivG~~~~~~~l~~~~~~~~~~i~~~~-~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~E 427 (895)
+.+ ++|.++..... .... ..+++.+++.+.|. .+++..+|+.| |++++|+..|++|++++|
T Consensus 225 ~~l~i~G~~~~~~~~-----------~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a----di~v~ps~~e~~~~~~~E 287 (365)
T cd03807 225 ARLLLVGDGPDRANL-----------ELLALKELGLEDKVILLGE--RSDVPALLNAL----DVFVLSSLSEGFPNVLLE 287 (365)
T ss_pred eEEEEecCCcchhHH-----------HHHHHHhcCCCceEEEccc--cccHHHHHHhC----CEEEeCCccccCCcHHHH
Confidence 544 66776643332 1233 36788889999996 47899999999 999999999999999999
Q ss_pred HHHcCCCEEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHhhCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHHHH
Q 002665 428 AAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRIS 506 (895)
Q Consensus 428 a~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~v-~~~s~~~~a~~~~~~l~ 506 (895)
||+||+|||+++.|+..|++.+ +|+++++.|+++++++|.+++++++.+.++++++++.+ ++|||+..+++|.+.|+
T Consensus 288 a~a~g~PvI~~~~~~~~e~~~~--~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~ 365 (365)
T cd03807 288 AMACGLPVVATDVGDNAELVGD--TGFLVPPGDPEALAEAIEALLADPALRQALGEAARERIEENFSIEAMVEAYEELYR 365 (365)
T ss_pred HHhcCCCEEEcCCCChHHHhhc--CCEEeCCCCHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 9999999999999999999876 89999999999999999999999999999999999999 68999999999999873
No 58
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=100.00 E-value=1.3e-30 Score=292.75 Aligned_cols=345 Identities=22% Similarity=0.200 Sum_probs=245.5
Q ss_pred eEEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhh
Q 002665 7 NMKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLM 86 (895)
Q Consensus 7 ~~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 86 (895)
|||++++.. +..||.++++..++++|.++| |+|++++...
T Consensus 1 MkIl~~~~~-------------~~~gG~~~~~~~l~~~l~~~G--~~v~v~~~~~------------------------- 40 (365)
T cd03825 1 MKVLHLNTS-------------DISGGAARAAYRLHRALQAAG--VDSTMLVQEK------------------------- 40 (365)
T ss_pred CeEEEEecC-------------CCCCcHHHHHHHHHHHHHhcC--CceeEEEeec-------------------------
Confidence 899999842 236999999999999999999 9999998741
Q ss_pred cccCCCCCcEEEEecCCCCCccccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHHh
Q 002665 87 QGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLS 166 (895)
Q Consensus 87 ~~~~~~~g~~i~r~~~~~~~~~l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~~ 166 (895)
. .+ .+.+. ..+|||||+|++..+.+.....
T Consensus 41 -------~-~~----------------------------~~~~~--------------~~~~diih~~~~~~~~~~~~~~ 70 (365)
T cd03825 41 -------K-AL----------------------------ISKIE--------------IINADIVHLHWIHGGFLSIEDL 70 (365)
T ss_pred -------c-hh----------------------------hhChh--------------cccCCEEEEEccccCccCHHHH
Confidence 1 00 00000 1569999999865444433333
Q ss_pred ccC--CCCEEEEeCCCchhhHHHHHH--------hCC---CC--hhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHH
Q 002665 167 GAL--NVPMVFTGHSLGRDKLEQLLK--------QGR---LS--RDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIE 231 (895)
Q Consensus 167 ~~~--~ip~v~t~H~~~~~~~~~~~~--------~g~---~~--~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~ 231 (895)
... ++|+|++.|+++......... .+. .. ...........++. .......++.++++|+...+
T Consensus 71 ~~~~~~~~~v~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~s~~~~~ 148 (365)
T cd03825 71 SKLLDRKPVVWTLHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRK--RKAWADLNLTIVAPSRWLAD 148 (365)
T ss_pred HHHHcCCCEEEEcccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHH--HHHhccCCcEEEehhHHHHH
Confidence 333 999999999875432110000 000 00 00000001111111 11222567778888876554
Q ss_pred HHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhcc
Q 002665 232 EQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFF 311 (895)
Q Consensus 232 ~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (895)
.....+. ... .++.++|||+|.+.|.+... ......+.
T Consensus 149 ~~~~~~~-~~~---------------------~~~~vi~ngi~~~~~~~~~~--------------------~~~~~~~~ 186 (365)
T cd03825 149 CARSSSL-FKG---------------------IPIEVIPNGIDTTIFRPRDK--------------------REARKRLG 186 (365)
T ss_pred HHHhccc-cCC---------------------CceEEeCCCCcccccCCCcH--------------------HHHHHHhC
Confidence 4433321 111 28999999999988754321 11223344
Q ss_pred CCCCCcEEEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEE
Q 002665 312 SNPRKPMILALARPDP--KKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVA 388 (895)
Q Consensus 312 ~~~~~~~Il~vgrl~~--~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~ 388 (895)
.+++++++++.++... .||++.+++|+..+.+. ..+++.+ ++|+++.... .++..++.
T Consensus 187 ~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~-~~~~~~~~i~G~~~~~~~------------------~~~~~~v~ 247 (365)
T cd03825 187 LPADKKIILFGAVGGTDPRKGFDELIEALKRLAER-WKDDIELVVFGASDPEIP------------------PDLPFPVH 247 (365)
T ss_pred CCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhc-cCCCeEEEEeCCCchhhh------------------ccCCCceE
Confidence 4566777888777765 89999999999988543 2355655 6676652111 14556899
Q ss_pred eCCCCC-CCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCHHHHHHH
Q 002665 389 YPKHHK-QSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADA 467 (895)
Q Consensus 389 ~~g~~~-~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~la~a 467 (895)
+.|+++ .+++..+|+.| |++++||..|+||++++|||+||+|||+++.|+..|++.++.+|+++++.|+++++++
T Consensus 248 ~~g~~~~~~~~~~~~~~a----d~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~ 323 (365)
T cd03825 248 YLGSLNDDESLALIYSAA----DVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEG 323 (365)
T ss_pred ecCCcCCHHHHHHHHHhC----CEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHH
Confidence 999998 67899999999 9999999999999999999999999999999999999998889999999999999999
Q ss_pred HHHHhhCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHHHHHh
Q 002665 468 LLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRISSC 508 (895)
Q Consensus 468 i~~ll~~~~~~~~~~~~~~~~v-~~~s~~~~a~~~~~~l~~~ 508 (895)
|.+++++++.+.++++++++.+ ++|||+.++++|+++|+++
T Consensus 324 l~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~~ 365 (365)
T cd03825 324 IEWLLADPDEREELGEAARELAENEFDSRVQAKRYLSLYEEL 365 (365)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 9999999999999999999999 6899999999999999863
No 59
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.98 E-value=4.5e-30 Score=284.35 Aligned_cols=344 Identities=23% Similarity=0.307 Sum_probs=248.5
Q ss_pred EEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhhc
Q 002665 8 MKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 87 (895)
Q Consensus 8 ~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 87 (895)
||++++.... + .||.++.+.+++++|++.| |+|++++..... ...+
T Consensus 1 kI~i~~~~~~-----------~-~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~---~~~~----------------- 46 (348)
T cd03820 1 KILFVIPSLG-----------N-AGGAERVLSNLANALAEKG--HEVTIISLDKGE---PPFY----------------- 46 (348)
T ss_pred CeEEEecccc-----------C-CCChHHHHHHHHHHHHhCC--CeEEEEecCCCC---CCcc-----------------
Confidence 5777775432 3 8999999999999999998 999999986321 0000
Q ss_pred ccCCCCCcEEEEecCCCCCccccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHHhc
Q 002665 88 GLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSG 167 (895)
Q Consensus 88 ~~~~~~g~~i~r~~~~~~~~~l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~~~ 167 (895)
....++++..++.... . ..+. . ......+.+.++. .+||+||++.+. ........
T Consensus 47 --~~~~~~~~~~~~~~~~-~-----~~~~-~-------~~~~~~~~~~l~~-------~~~d~i~~~~~~--~~~~~~~~ 101 (348)
T cd03820 47 --ELDPKIKVIDLGDKRD-S-----KLLA-R-------FKKLRRLRKLLKN-------NKPDVVISFLTS--LLTFLASL 101 (348)
T ss_pred --ccCCccceeecccccc-c-----chhc-c-------ccchHHHHHhhcc-------cCCCEEEEcCch--HHHHHHHH
Confidence 0113566666554322 1 0000 0 0111111222222 569999999875 12222222
Q ss_pred cCC-CCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHH
Q 002665 168 ALN-VPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 246 (895)
Q Consensus 168 ~~~-ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~ 246 (895)
..+ +|++++.|+........ ..+...++..++.+|.+++.|+...... +.. .+
T Consensus 102 ~~~~~~~i~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~d~ii~~s~~~~~~~---~~~-~~---- 155 (348)
T cd03820 102 GLKIVKLIVSEHNSPDAYKKR------------------LRRLLLRRLLYRRADAVVVLTEEDRALY---YKK-FN---- 155 (348)
T ss_pred hhccccEEEecCCCccchhhh------------------hHHHHHHHHHHhcCCEEEEeCHHHHHHh---hcc-CC----
Confidence 334 59999999874432110 0000135667999999999998765211 111 11
Q ss_pred HHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCCC
Q 002665 247 KLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPD 326 (895)
Q Consensus 247 ~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl~ 326 (895)
.++.++|||++...+.+. ...+++.++++|++.
T Consensus 156 -----------------~~~~vi~~~~~~~~~~~~------------------------------~~~~~~~i~~~g~~~ 188 (348)
T cd03820 156 -----------------KNVVVIPNPLPFPPEEPS------------------------------SDLKSKRILAVGRLV 188 (348)
T ss_pred -----------------CCeEEecCCcChhhcccc------------------------------CCCCCcEEEEEEeec
Confidence 289999999998765432 124678999999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHh
Q 002665 327 PKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLA 405 (895)
Q Consensus 327 ~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a 405 (895)
+.||++.+++++..+.+.. +++.+ ++|.++... .+.+.+.++++.+++.+.|. .+++..+|+.|
T Consensus 189 ~~K~~~~l~~~~~~l~~~~--~~~~l~i~G~~~~~~-----------~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a 253 (348)
T cd03820 189 PQKGFDLLIEAWAKIAKKH--PDWKLRIVGDGPERE-----------ALEALIKELGLEDRVILLGF--TKNIEEYYAKA 253 (348)
T ss_pred cccCHHHHHHHHHHHHhcC--CCeEEEEEeCCCCHH-----------HHHHHHHHcCCCCeEEEcCC--cchHHHHHHhC
Confidence 9999999999999996533 44444 678766533 33456788899999999998 78999999999
Q ss_pred hcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCC-CcccccccCCceEEeCCCCHHHHHHHHHHHhhCHHHHHHHHHH
Q 002665 406 AKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNG-GPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQN 484 (895)
Q Consensus 406 ~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~g-g~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~ 484 (895)
|++++||..|+||++++|||+||+|||+++.+ +..+++.++.+|+++++.|+++++++|.+++++++.+++++++
T Consensus 254 ----d~~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~ 329 (348)
T cd03820 254 ----SIFVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMEDEELRKRMGAN 329 (348)
T ss_pred ----CEEEeCccccccCHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 99999999999999999999999999999864 5677777777999999999999999999999999999999999
Q ss_pred HHHHHhhCCHHHHHHHHH
Q 002665 485 GLKNIHQFSWPEHCKSYL 502 (895)
Q Consensus 485 ~~~~v~~~s~~~~a~~~~ 502 (895)
+++.+++|+|+.++++|.
T Consensus 330 ~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 330 ARESAERFSIENIIKQWE 347 (348)
T ss_pred HHHHHHHhCHHHHHHHhc
Confidence 988889999999999885
No 60
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=99.98 E-value=5.8e-30 Score=285.29 Aligned_cols=372 Identities=26% Similarity=0.337 Sum_probs=268.0
Q ss_pred EEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhhc
Q 002665 8 MKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 87 (895)
Q Consensus 8 ~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 87 (895)
||++|+.... |..||...++..++++|.+.| |+|++++........... .
T Consensus 1 kI~ii~~~~~-----------~~~~G~~~~~~~l~~~L~~~g--~~v~i~~~~~~~~~~~~~-------~---------- 50 (374)
T cd03801 1 KILLVTPEYP-----------PSVGGAERHVLELARALAARG--HEVTVLTPGDGGLPDEEE-------V---------- 50 (374)
T ss_pred CeeEEecccC-----------CccCcHhHHHHHHHHHHHhcC--ceEEEEecCCCCCCceee-------e----------
Confidence 5788886553 457999999999999999998 999999986322111000 0
Q ss_pred ccCCCCCcEEEEecCCCCCccccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHHhc
Q 002665 88 GLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSG 167 (895)
Q Consensus 88 ~~~~~~g~~i~r~~~~~~~~~l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~~~ 167 (895)
.......... . .. ... ..........+.+.+.+ .+||+||++.+.........++
T Consensus 51 -----~~~~~~~~~~--~----~~----~~~---~~~~~~~~~~~~~~~~~-------~~~Dii~~~~~~~~~~~~~~~~ 105 (374)
T cd03801 51 -----GGIVVVRPPP--L----LR----VRR---LLLLLLLALRLRRLLRR-------ERFDVVHAHDWLALLAAALAAR 105 (374)
T ss_pred -----cCcceecCCc--c----cc----cch---hHHHHHHHHHHHHHhhh-------cCCcEEEEechhHHHHHHHHHH
Confidence 0000000000 0 00 000 00111111122222222 5699999999866655556777
Q ss_pred cCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHH
Q 002665 168 ALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERK 247 (895)
Q Consensus 168 ~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~ 247 (895)
..++|++++.|+.+....... ...... .....+...++.+|.+++.|+...+.+...+... +
T Consensus 106 ~~~~~~i~~~h~~~~~~~~~~----------~~~~~~--~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~~-~----- 167 (374)
T cd03801 106 LLGIPLVLTVHGLEFGRPGNE----------LGLLLK--LARALERRALRRADRIIAVSEATREELRELGGVP-P----- 167 (374)
T ss_pred hcCCcEEEEeccchhhccccc----------hhHHHH--HHHHHHHHHHHhCCEEEEecHHHHHHHHhcCCCC-C-----
Confidence 889999999999865432110 000111 1112356678999999999998877665554331 1
Q ss_pred HHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCCCC
Q 002665 248 LRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDP 327 (895)
Q Consensus 248 l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl~~ 327 (895)
.++.++|||+|...+.+.. ...........+.+.|+++|++..
T Consensus 168 ----------------~~~~~i~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~i~~~g~~~~ 210 (374)
T cd03801 168 ----------------EKITVIPNGVDTERFRPAP---------------------RAARRRLGIPEDEPVILFVGRLVP 210 (374)
T ss_pred ----------------CcEEEecCcccccccCccc---------------------hHHHhhcCCcCCCeEEEEecchhh
Confidence 1899999999988775421 001111222356789999999999
Q ss_pred CCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhh
Q 002665 328 KKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAA 406 (895)
Q Consensus 328 ~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~ 406 (895)
.||++.+++++..+.... +++.+ ++|+++. ...+...+.+++..++|.+.|+++.+++..+|+.|
T Consensus 211 ~k~~~~~i~~~~~~~~~~--~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~- 276 (374)
T cd03801 211 RKGVDLLLEALAKLRKEY--PDVRLVIVGDGPL-----------REELEALAAELGLGDRVTFLGFVPDEDLPALYAAA- 276 (374)
T ss_pred hcCHHHHHHHHHHHhhhc--CCeEEEEEeCcHH-----------HHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhc-
Confidence 999999999999986543 44554 6675543 23444566778888999999999999999999999
Q ss_pred cCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHhhCHHHHHHHHHHHH
Q 002665 407 KTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGL 486 (895)
Q Consensus 407 ~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~ 486 (895)
|++++|+..|++|++++|||++|+|||+++.++..+++.++.+|+++++.|+++++++|.+++++++.+.+++++++
T Consensus 277 ---di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~ 353 (374)
T cd03801 277 ---DVFVLPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDPELRRRLGEAAR 353 (374)
T ss_pred ---CEEEecchhccccchHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcChHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988999999999999999999999999999999999999
Q ss_pred HHH-hhCCHHHHHHHHHHHHH
Q 002665 487 KNI-HQFSWPEHCKSYLSRIS 506 (895)
Q Consensus 487 ~~v-~~~s~~~~a~~~~~~l~ 506 (895)
+.+ +.|+|+.+++++.+.++
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~ 374 (374)
T cd03801 354 ERVAERFSWDRVAARTEEVYY 374 (374)
T ss_pred HHHHHhcCHHHHHHHHHHhhC
Confidence 777 79999999999998763
No 61
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.98 E-value=4.3e-32 Score=298.33 Aligned_cols=386 Identities=30% Similarity=0.390 Sum_probs=276.5
Q ss_pred cCccCCCCCCCCCchhhHHHHHHHHHhcCCCc-----------ceEEEeeccccCCCCCCCCCccccccccccchhhhcc
Q 002665 20 GENMELGRDSDTGGQVKYVVELARALGSMPGV-----------YRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQG 88 (895)
Q Consensus 20 ~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~-----------~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 88 (895)
|++ +|| +||+||+..|+++.+++|. .+.+ ..|++++.....+.. + +++.
T Consensus 63 ~~~-~lg-~~d~G~qV~~l~~h~~al~-~~~~~~~~~~~l~~~~~i~vv~~~lP~~~~-----~------------~~~~ 122 (495)
T KOG0853|consen 63 GQD-VLG-LPDTGGQVVYLTSHEDALE-MPLLLRCFAETLDGTPPILVVGDWLPRAMG-----Q------------FLEQ 122 (495)
T ss_pred ccc-ccC-CCCCCceEEEEehhhhhhc-chHHHHHHHHHhcCCCceEEEEeecCcccc-----h------------hhhh
Confidence 778 899 8999999999999998883 2222 245555543211110 0 1122
Q ss_pred cCCCCCcEEEEecCCCCCccccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHHhcc
Q 002665 89 LGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGA 168 (895)
Q Consensus 89 ~~~~~g~~i~r~~~~~~~~~l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~~~~ 168 (895)
.....+++|+++|++...++. +.+|+++..|+..+......+ +. ||++|.++|+.+....++++.
T Consensus 123 ~~~~~~~~il~~~~~~~~k~~--~~~d~~i~d~~~~~~~l~~~~------------~~-p~~~~~i~~~~h~~~~lla~r 187 (495)
T KOG0853|consen 123 VAGCAYLRILRIPFGILFKWA--EKVDPIIEDFVSACVPLLKQL------------SG-PDVIIKIYFYCHFPDSLLAKR 187 (495)
T ss_pred hhccceeEEEEeccchhhhhh--hhhceeecchHHHHHHHHHHh------------cC-CcccceeEEeccchHHHhccc
Confidence 333458999999997764444 778999999985444433332 13 999999999999999999999
Q ss_pred CCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHHH
Q 002665 169 LNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKL 248 (895)
Q Consensus 169 ~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l 248 (895)
.|++-+++.|.+...+.+ ....++.+++.+......+..........
T Consensus 188 ~g~~~~l~~~~l~~~e~e----------------------------~~~~~~~~~~ns~~~~~~f~~~~~~L~~~----- 234 (495)
T KOG0853|consen 188 LGVLKVLYRHALDKIEEE----------------------------TTGLAWKILVNSYFTKRQFKATFVSLSNS----- 234 (495)
T ss_pred cCccceeehhhhhhhhhh----------------------------hhhccceEecchhhhhhhhhhhhhhcCCC-----
Confidence 999999999987554432 24455666666665555544443332221
Q ss_pred HHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCCCCC
Q 002665 249 RARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPK 328 (895)
Q Consensus 249 ~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl~~~ 328 (895)
.+.+.+++||.+.+.+..-+..... ....+........+.+++.+.|+.+.
T Consensus 235 ----------------d~~~~y~ei~~s~~~~~~~~~~~~~-------------~~~~r~~~~v~~~d~~~~siN~~~pg 285 (495)
T KOG0853|consen 235 ----------------DITSTYPEIDGSWFTYGQYESHLEL-------------RLPVRLYRGVSGIDRFFPSINRFEPG 285 (495)
T ss_pred ----------------Ccceeeccccchhccccccccchhc-------------ccccceeeeecccceEeeeeeecCCC
Confidence 4667777777776654221110000 00011112223346788999999999
Q ss_pred CCHHHHHHHHHhcccccCC---CcEEE-EEecCCCchhhhhhhHHHHHHHHHHHHHcCCC-CCEEeCCCCCCCcHHHHHH
Q 002665 329 KNITTLVKAFGECRPLREL---ANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLY-GQVAYPKHHKQSDVPDIYR 403 (895)
Q Consensus 329 Kgi~~ll~A~~~l~~~~~~---~~l~l-ivG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~-~~v~~~g~~~~~el~~ly~ 403 (895)
||+...+.||..+...-+. +..++ ++|+. .++....+..+++.++..+++++++. ..++|....++.+. |+
T Consensus 286 kd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~-G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~s~~~~~~---yr 361 (495)
T KOG0853|consen 286 KDQDLALPAFTLLHDSIPEPSISSEHLVVAGSR-GYDERDSENVEYLKELLSLIEEYDLLGQFVWFLPSTTRVAK---YR 361 (495)
T ss_pred CCceeehhhHHhhhcccCCCCCCceEEEEecCC-CccccchhhHHHHHHHHHHHHHhCccCceEEEecCCchHHH---HH
Confidence 9999999999998765543 44555 44533 26677778888999999999999996 56777788666555 55
Q ss_pred HhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCHH---HHHHHHHHHhhCHHHHHH
Q 002665 404 LAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQ---SIADALLKLVSDKQLWER 480 (895)
Q Consensus 404 ~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~---~la~ai~~ll~~~~~~~~ 480 (895)
.++.++.++..|+. |.||+|.+|||+||+|||+|++||+.|++.++.+|++++| +.+ .++++|.++.+||+.|.+
T Consensus 362 l~adt~~v~~qPa~-E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp-~~e~~~~~a~~~~kl~~~p~l~~~ 439 (495)
T KOG0853|consen 362 LAADTKGVLYQPAN-EHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLIDP-GQEAVAELADALLKLRRDPELWAR 439 (495)
T ss_pred HHHhcceEEecCCC-CCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceeeCC-chHHHHHHHHHHHHHhcCHHHHHH
Confidence 55555666666666 9999999999999999999999999999999999999999 666 699999999999999999
Q ss_pred HHHHHHHHHh-hCCHHHHHHHHHHHHHHh
Q 002665 481 CRQNGLKNIH-QFSWPEHCKSYLSRISSC 508 (895)
Q Consensus 481 ~~~~~~~~v~-~~s~~~~a~~~~~~l~~~ 508 (895)
|+++++++++ .|+|..+.+++.+.+...
T Consensus 440 ~~~~G~~rV~e~fs~~~~~~ri~~~~~~~ 468 (495)
T KOG0853|consen 440 MGKNGLKRVKEMFSWQHYSERIASVLGKY 468 (495)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhHhc
Confidence 9999999995 699977777777776643
No 62
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.97 E-value=2.7e-29 Score=279.35 Aligned_cols=347 Identities=24% Similarity=0.324 Sum_probs=254.8
Q ss_pred CCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhhcccCCCCCcEEEEecCCCCCcccc
Q 002665 31 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQ 110 (895)
Q Consensus 31 ~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~g~~i~r~~~~~~~~~l~ 110 (895)
.||.++++.+++++|.+.| |+|++++....... . ....+++++.++..... .
T Consensus 9 ~~g~~~~~~~l~~~L~~~g--~~v~~~~~~~~~~~----------~-------------~~~~~~~~~~~~~~~~~--~- 60 (359)
T cd03808 9 DGGLYSFRLPLIKALRAAG--YEVHVVAPPGDELE----------E-------------LEALGVKVIPIPLDRRG--I- 60 (359)
T ss_pred chhHHHHHHHHHHHHHhcC--CeeEEEecCCCccc----------c-------------cccCCceEEeccccccc--c-
Confidence 6899999999999999998 99999998632111 0 01147777777654310 0
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHHhc-cCCCCEEEEeCCCchhhHHHHH
Q 002665 111 KELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSG-ALNVPMVFTGHSLGRDKLEQLL 189 (895)
Q Consensus 111 k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~~~-~~~ip~v~t~H~~~~~~~~~~~ 189 (895)
..+ ..+.....+.+.+++ .+||+||+|...+..++...++ ..+.+++++.|+.........
T Consensus 61 --~~~--------~~~~~~~~~~~~~~~-------~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~- 122 (359)
T cd03808 61 --NPF--------KDLKALLRLYRLLRK-------ERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFTSGG- 122 (359)
T ss_pred --ChH--------hHHHHHHHHHHHHHh-------cCCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhccch-
Confidence 000 011122222333333 5799999998766666666665 456678888888754321100
Q ss_pred HhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEe
Q 002665 190 KQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVI 269 (895)
Q Consensus 190 ~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vi 269 (895)
. ....... .++..++.+|.+++.|+...+.+...+..... .++.++
T Consensus 123 --------~---~~~~~~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~---------------------~~~~~~ 168 (359)
T cd03808 123 --------L---KRRLYLL--LERLALRFTDKVIFQNEDDRDLALKLGIIKKK---------------------KTVLIP 168 (359)
T ss_pred --------h---HHHHHHH--HHHHHHhhccEEEEcCHHHHHHHHHhcCCCcC---------------------ceEEec
Confidence 0 1112222 25667889999999999887766554322111 177889
Q ss_pred CCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc
Q 002665 270 PPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELAN 349 (895)
Q Consensus 270 p~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~ 349 (895)
|+|+|...+.+.... ...+.+.|+++|++.+.||++.+++++..+.+.. ++
T Consensus 169 ~~~~~~~~~~~~~~~---------------------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~--~~ 219 (359)
T cd03808 169 GSGVDLDRFSPSPEP---------------------------IPEDDPVFLFVARLLKDKGIDELLEAARILKAKG--PN 219 (359)
T ss_pred CCCCChhhcCccccc---------------------------cCCCCcEEEEEeccccccCHHHHHHHHHHHHhcC--CC
Confidence 999998877543210 1246789999999999999999999999986433 34
Q ss_pred EEE-EEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHH
Q 002665 350 LTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEA 428 (895)
Q Consensus 350 l~l-ivG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea 428 (895)
+.+ ++|.++....... . .+...+..++|.|.|+ .+++..+|+.| |++++|+..|++|++++||
T Consensus 220 ~~l~i~G~~~~~~~~~~--------~--~~~~~~~~~~v~~~g~--~~~~~~~~~~a----di~i~ps~~e~~~~~~~Ea 283 (359)
T cd03808 220 VRLLLVGDGDEENPAAI--------L--EIEKLGLEGRVEFLGF--RDDVPELLAAA----DVFVLPSYREGLPRVLLEA 283 (359)
T ss_pred eEEEEEcCCCcchhhHH--------H--HHHhcCCcceEEEeec--cccHHHHHHhc----cEEEecCcccCcchHHHHH
Confidence 444 6777664333210 0 3556677789999998 68999999999 9999999999999999999
Q ss_pred HHcCCCEEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHhhCHHHHHHHHHHHHHHH-hhCCHHHHHHHHH
Q 002665 429 AAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYL 502 (895)
Q Consensus 429 ~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~v-~~~s~~~~a~~~~ 502 (895)
|+||+|||+++.++..+++.++.+|+++++.|+++++++|.+++.+++.+.++++++++.+ ++|||+.++++|+
T Consensus 284 ~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 284 MAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIEDPELRARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHcCCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 9999999999999999999988899999999999999999999999999999999999997 7999999999876
No 63
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=99.97 E-value=1.9e-30 Score=295.31 Aligned_cols=327 Identities=16% Similarity=0.146 Sum_probs=244.8
Q ss_pred HHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHHhccC-CCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHH
Q 002665 129 IIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGAL-NVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMR 207 (895)
Q Consensus 129 ~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~~~~~-~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 207 (895)
.+.+++.+.+... .-|+|.+|.+....++..+.+.. ..++.|..|-.++..- +. +..-
T Consensus 114 N~~fA~~i~~~~~-----~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlHipfP~~e--~f--------------~~lp 172 (456)
T TIGR02400 114 NRLFAEALAPLLQ-----PGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFPSSE--IY--------------RTLP 172 (456)
T ss_pred HHHHHHHHHHhCC-----CCCEEEEecchhhHHHHHHHhhCCCCeEEEEEeCCCCChH--HH--------------hhCC
Confidence 3445555554322 25899999987767777676654 5688899997665431 11 1000
Q ss_pred hHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHHHHHh-HhccccccCCCCCCeEEeCCCCcCCCcccCCCCCC
Q 002665 208 RIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRAR-IKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVD 286 (895)
Q Consensus 208 r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~-~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~ 286 (895)
+...-...+..||.|...|...++.+.... .++|+.. ...|+...|+.. ++.++|||||++.|.+.....
T Consensus 173 ~r~~il~gll~~dligF~t~~~~~~Fl~~~-------~~~l~~~~~~~~~~~~g~~~-~v~viP~GID~~~f~~~~~~~- 243 (456)
T TIGR02400 173 WRRELLEGLLAYDLVGFQTYDDARNFLSAV-------SRELGLETLPNGVESGGRTV-RVGAFPIGIDVDRFAEQAKKP- 243 (456)
T ss_pred cHHHHHHHHhcCCEEEECCHHHHHHHHHHH-------HHHhCCcccCCceEECCcEE-EEEEecCcCCHHHHHHHhcCh-
Confidence 111122357799999999999888775432 2233222 234566667766 899999999999997643111
Q ss_pred CcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEE-EE-----ecCC
Q 002665 287 GEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IM-----GNRD 358 (895)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~--~l~l-iv-----G~~~ 358 (895)
........++..+ +++++|+++||+++.||+..+++||+++++.+|+. ++++ ++ |+++
T Consensus 244 ------------~~~~~~~~lr~~~--~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~ 309 (456)
T TIGR02400 244 ------------SVQKRIAELRESL--KGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVP 309 (456)
T ss_pred ------------hHHHHHHHHHHHc--CCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccCch
Confidence 0011111222222 47889999999999999999999999997655654 3443 33 4556
Q ss_pred CchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCC----
Q 002665 359 DIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLP---- 434 (895)
Q Consensus 359 ~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~P---- 434 (895)
.+.+++...++.+++++...++.++.+.+++.+.++.+++.++|+.| ||+|+||.+||||++++||||||+|
T Consensus 310 ~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aa----Dv~vv~S~~EG~~Lv~lEamA~g~P~~g~ 385 (456)
T TIGR02400 310 EYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAA----DVGLVTPLRDGMNLVAKEYVAAQDPKDGV 385 (456)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhC----cEEEECccccccCccHHHHHHhcCCCCce
Confidence 77888888888888888888888888888889999999999999999 9999999999999999999999999
Q ss_pred EEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Q 002665 435 IVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVS-DKQLWERCRQNGLKNIHQFSWPEHCKSYLSRIS 506 (895)
Q Consensus 435 Vvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~-~~~~~~~~~~~~~~~v~~~s~~~~a~~~~~~l~ 506 (895)
+|+|..+|..+.+. +|++|+|+|+++++++|.++|+ ++++++++.+.+++++.+||+..|+++|++.+.
T Consensus 386 vVlS~~~G~~~~l~---~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 386 LILSEFAGAAQELN---GALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWREDFLSDLN 455 (456)
T ss_pred EEEeCCCCChHHhC---CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 88887666666553 7999999999999999999999 788999999999999989999999999998764
No 64
>PRK10976 putative hydrolase; Provisional
Probab=99.97 E-value=1.1e-31 Score=288.10 Aligned_cols=246 Identities=15% Similarity=0.111 Sum_probs=159.0
Q ss_pred cEEEEEEecCCCC---hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCceEecC
Q 002665 610 KYVFVIAADCDTT---SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYP 686 (895)
Q Consensus 610 ~kli~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~ 686 (895)
.|||++|+||||. +.+++.+++++++++++| +.|+|||||++.++.++++++++. +++||+||+.|+..
T Consensus 2 ikli~~DlDGTLl~~~~~is~~~~~ai~~l~~~G----~~~~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~i~~~ 73 (266)
T PRK10976 2 YQVVASDLDGTLLSPDHTLSPYAKETLKLLTARG----IHFVFATGRHHVDVGQIRDNLEIK----SYMITSNGARVHDT 73 (266)
T ss_pred ceEEEEeCCCCCcCCCCcCCHHHHHHHHHHHHCC----CEEEEEcCCChHHHHHHHHhcCCC----CeEEEcCCcEEECC
Confidence 5899999999993 568899999999999987 999999999999999999999883 57999999999863
Q ss_pred CCCC--CCCCC-------CCcccC-cc--hhhhhccccCcchHHHHHHHHhhhccCCCCccCcccccccccccceEEEEE
Q 002665 687 SSST--EDNHG-------LPFLVD-LD--YRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFE 754 (895)
Q Consensus 687 ~~~~--~~~~~-------~~~~~d-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 754 (895)
+... +.... +..... .. +.......|.................... ..............|+.+.
T Consensus 74 ~~~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~ki~~~ 150 (266)
T PRK10976 74 DGNLIFSHNLDRDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKY---QLYEPGLLEPDGVSKVFFT 150 (266)
T ss_pred CCCEehhhcCCHHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcc---eeechhhcccCCceEEEEE
Confidence 2110 00000 000000 00 00000000110000000000000000000 0000000011234566554
Q ss_pred ecCCCCCcCHHHHHHHHHhh-cCeEEEEEeeCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEeCcCCCcccccccc
Q 002665 755 VTNPQMIPPVKELRKLMRIQ-ALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLG 833 (895)
Q Consensus 755 ~~~~~~~~~~~~l~~~l~~~-~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~ 833 (895)
..+++ .+.++.+.+.+. ...+.++.+.+. ++||+|+|+|||+||++|++++||+++++|| +||+.| | ++||+
T Consensus 151 ~~~~~---~~~~~~~~l~~~~~~~~~~~~s~~~-~~eI~~~gvsKg~al~~l~~~lgi~~~~via-fGD~~N-D-i~Ml~ 223 (266)
T PRK10976 151 CDSHE---KLLPLEQAINARWGDRVNVSFSTLT-CLEVMAGGVSKGHALEAVAKKLGYSLKDCIA-FGDGMN-D-AEMLS 223 (266)
T ss_pred cCCHH---HHHHHHHHHHHHhCCcEEEEEeCCc-eEEEEcCCCChHHHHHHHHHHcCCCHHHeEE-EcCCcc-c-HHHHH
Confidence 32221 233455555433 345777777775 9999999999999999999999999999999 677777 7 99999
Q ss_pred CcceEEEEcCchhhhHhhhhcCCCCCCCcccCCCCceE--EeccccChHHHHHHHHHhcc
Q 002665 834 GVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVI--QVDEACDSYDIRASLEKLGV 891 (895)
Q Consensus 834 ~ag~gVaMgNA~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~t~~~~~~gI~~al~~~~~ 891 (895)
.+|+||||+||. +.+|..+. +||.++++||++++|++|.+
T Consensus 224 ~ag~~vAm~NA~------------------~~vK~~A~~~~v~~~n~edGVa~~l~~~~~ 265 (266)
T PRK10976 224 MAGKGCIMGNAH------------------QRLKDLLPELEVIGSNADDAVPHYLRKLYL 265 (266)
T ss_pred HcCCCeeecCCc------------------HHHHHhCCCCeecccCchHHHHHHHHHHhh
Confidence 999999999999 44444443 78899999999999999853
No 65
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.97 E-value=3.8e-29 Score=279.18 Aligned_cols=354 Identities=22% Similarity=0.252 Sum_probs=244.9
Q ss_pred EEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhhc
Q 002665 8 MKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQ 87 (895)
Q Consensus 8 ~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 87 (895)
||++|+.... +..+||.++++.+|+++|+++| |+|++++.......... ..
T Consensus 1 kIl~i~~~~~----------~~~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~~~--~~--------------- 51 (359)
T cd03823 1 RILVVNHLYP----------PRSVGGAEVVAHDLAEALAKRG--HEVAVLTAGEDPPRQDK--EV--------------- 51 (359)
T ss_pred CeeEEcccCC----------cccccchHHHHHHHHHHHHhcC--CceEEEeCCCCCCCccc--cc---------------
Confidence 6888885543 2447999999999999999999 99999997632211100 00
Q ss_pred ccCCCCCcEEEEecCCCCC-ccccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCC-chHHHHHH
Q 002665 88 GLGESSGAYIIRIPFGPKD-KYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYAD-AGDAAALL 165 (895)
Q Consensus 88 ~~~~~~g~~i~r~~~~~~~-~~l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~-~~~~~~~~ 165 (895)
.+..+...+..... ....+ ..+.....+...+.. .+.+.+.+ .+||+||+|... .+......
T Consensus 52 -----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~-------~~~dii~~~~~~~~~~~~~~~ 115 (359)
T cd03823 52 -----IGVVVYGRPIDEVLRSALPR-DLFHLSDYDNPAVVA---EFARLLED-------FRPDVVHFHHLQGLGVSILRA 115 (359)
T ss_pred -----ccceeeccccccccCCCchh-hhhHHHhccCHHHHH---HHHHHHHH-------cCCCEEEECCccchHHHHHHH
Confidence 11122111100000 00000 000000000001111 12222222 579999999863 23334455
Q ss_pred hccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHH
Q 002665 166 SGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 245 (895)
Q Consensus 166 ~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~ 245 (895)
++..++|++++.|+.+...... .. .....|.+++.|+...+.+...... +
T Consensus 116 ~~~~~~~~i~~~hd~~~~~~~~----------------~~---------~~~~~d~ii~~s~~~~~~~~~~~~~--~--- 165 (359)
T cd03823 116 ARDRGIPIVLTLHDYWLICPRQ----------------GL---------FKKGGDAVIAPSRFLLDRYVANGLF--A--- 165 (359)
T ss_pred HHhcCCCEEEEEeeeeeecchh----------------hh---------hccCCCEEEEeCHHHHHHHHHcCCC--c---
Confidence 6677899999999875422100 00 1122399999999776655433211 1
Q ss_pred HHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCC
Q 002665 246 RKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARP 325 (895)
Q Consensus 246 ~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl 325 (895)
.++.++|||+|...+.+... ....++++|+++||+
T Consensus 166 ------------------~~~~vi~n~~~~~~~~~~~~---------------------------~~~~~~~~i~~~G~~ 200 (359)
T cd03823 166 ------------------EKISVIRNGIDLDRAKRPRR---------------------------APPGGRLRFGFIGQL 200 (359)
T ss_pred ------------------cceEEecCCcChhhcccccc---------------------------CCCCCceEEEEEecC
Confidence 18999999999987754321 013467889999999
Q ss_pred CCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHH
Q 002665 326 DPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRL 404 (895)
Q Consensus 326 ~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~ 404 (895)
.+.||++.+++++..+.. +++.+ ++|.++...... .. .+..+++.+.|+++.+++..+|+.
T Consensus 201 ~~~k~~~~li~~~~~l~~----~~~~l~i~G~~~~~~~~~-----------~~---~~~~~~v~~~g~~~~~~~~~~~~~ 262 (359)
T cd03823 201 TPHKGVDLLLEAFKRLPR----GDIELVIVGNGLELEEES-----------YE---LEGDPRVEFLGAYPQEEIDDFYAE 262 (359)
T ss_pred ccccCHHHHHHHHHHHHh----cCcEEEEEcCchhhhHHH-----------Hh---hcCCCeEEEeCCCCHHHHHHHHHh
Confidence 999999999999999853 34444 677776432211 11 155678999999999999999999
Q ss_pred hhcCCcEEEecCC-CCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHhhCHHHHHHHHH
Q 002665 405 AAKTKGVFINPAF-IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQ 483 (895)
Q Consensus 405 a~~~~Dv~v~ps~-~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~ 483 (895)
| |++++|+. .|++|++++|||+||+|||+++.|+..|++.++.+|+++++.|+++++++|.+++++++.++.+++
T Consensus 263 a----d~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~ 338 (359)
T cd03823 263 I----DVLVVPSIWPENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDDPDLLERLRA 338 (359)
T ss_pred C----CEEEEcCcccCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhChHHHHHHHH
Confidence 9 99999997 799999999999999999999999999999988899999999999999999999999999999999
Q ss_pred HHHHHHhhCCHHHHHHHHHHHHH
Q 002665 484 NGLKNIHQFSWPEHCKSYLSRIS 506 (895)
Q Consensus 484 ~~~~~v~~~s~~~~a~~~~~~l~ 506 (895)
++++..+. +.++++++++|+
T Consensus 339 ~~~~~~~~---~~~~~~~~~~~~ 358 (359)
T cd03823 339 GIEPPRSI---EDQAEEYLKLYR 358 (359)
T ss_pred hHHHhhhH---HHHHHHHHHHhh
Confidence 98887644 888888888875
No 66
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.97 E-value=1.7e-31 Score=287.32 Aligned_cols=248 Identities=13% Similarity=0.084 Sum_probs=158.5
Q ss_pred cEEEEEEecCCCC---hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCceEecC
Q 002665 610 KYVFVIAADCDTT---SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYP 686 (895)
Q Consensus 610 ~kli~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~ 686 (895)
.|+|++|+||||. +.+++.+++++++++++| +.|+|||||++.++.++++++++.. ..+++||+||+.|++.
T Consensus 3 ~kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~G----~~~~iaTGR~~~~~~~~~~~l~~~~-~~~~~I~~NGa~i~~~ 77 (270)
T PRK10513 3 IKLIAIDMDGTLLLPDHTISPAVKQAIAAARAKG----VNVVLTTGRPYAGVHRYLKELHMEQ-PGDYCITNNGALVQKA 77 (270)
T ss_pred eEEEEEecCCcCcCCCCccCHHHHHHHHHHHHCC----CEEEEecCCChHHHHHHHHHhCCCC-CCCeEEEcCCeEEEEC
Confidence 6899999999993 568999999999999987 9999999999999999999998831 1258999999999863
Q ss_pred C-CCC--CCCCCCC-------cccCcchhhhh--ccccCc--chHHHHHHHHhhhccCCCCccCcccccccccccceEEE
Q 002665 687 S-SST--EDNHGLP-------FLVDLDYRFHT--EYRWGG--EGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYA 752 (895)
Q Consensus 687 ~-~~~--~~~~~~~-------~~~d~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 752 (895)
. ... ......+ +.........+ ...|.. ....... ............ ...+..........|+.
T Consensus 78 ~~~~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~k~~ 155 (270)
T PRK10513 78 ADGETVAQTALSYDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYT-VHESFLTGIPLV-FREVEKMDPNLQFPKVM 155 (270)
T ss_pred CCCCEEEecCCCHHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhH-HHhhhhccCCcc-ccchhhccccCCceEEE
Confidence 2 110 0000000 00000000000 000000 0000000 000000000000 00000000111234554
Q ss_pred EEecCCCCCcCHHHHHHHHHh-hcCeEEEEEeeCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEeCcCCCcccccc
Q 002665 753 FEVTNPQMIPPVKELRKLMRI-QALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGL 831 (895)
Q Consensus 753 ~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~M 831 (895)
+.. .++ .++++.+.+.. ....+.++.|.+. ++||+|+|+|||+||++|++++||++++++| +||+.| | ++|
T Consensus 156 ~~~-~~~---~~~~~~~~~~~~~~~~~~~~~s~~~-~~eI~~~gvsKg~al~~l~~~~gi~~~~v~a-fGD~~N-D-i~M 227 (270)
T PRK10513 156 MID-EPE---ILDAAIARIPAEVKERYTVLKSAPY-FLEILDKRVNKGTGVKSLAEHLGIKPEEVMA-IGDQEN-D-IAM 227 (270)
T ss_pred EeC-CHH---HHHHHHHHhHHHhcCcEEEEEecCe-eEEEeCCCCChHHHHHHHHHHhCCCHHHEEE-ECCchh-h-HHH
Confidence 432 111 22344444432 2345677778775 9999999999999999999999999999999 666667 7 999
Q ss_pred ccCcceEEEEcCchhhhHhhhhcCCCCCCCcccCCCCceEEeccccChHHHHHHHHHhc
Q 002665 832 LGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLG 890 (895)
Q Consensus 832 l~~ag~gVaMgNA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~gI~~al~~~~ 890 (895)
|+.+|+||||+||. +.+|..+.+||.++++|||+++|++|.
T Consensus 228 l~~ag~~vAm~NA~------------------~~vK~~A~~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 228 IEYAGVGVAMGNAI------------------PSVKEVAQFVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred HHhCCceEEecCcc------------------HHHHHhcCeeccCCCcchHHHHHHHHh
Confidence 99999999999999 555666669999999999999999875
No 67
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.97 E-value=7e-31 Score=281.34 Aligned_cols=234 Identities=18% Similarity=0.141 Sum_probs=159.0
Q ss_pred ccEEEEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCceEec
Q 002665 609 RKYVFVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYY 685 (895)
Q Consensus 609 ~~kli~~DiDGTL---~~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~ 685 (895)
..|+|++|+|||| .+.+++.++++|++++++| +.|+|||||++..+.++++++++. .++||+||++|++
T Consensus 2 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~~~~~g----~~v~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~i~~ 73 (264)
T COG0561 2 MIKLLAFDLDGTLLDSNKTISPETKEALARLREKG----VKVVLATGRPLPDVLSILEELGLD----GPLITFNGALIYN 73 (264)
T ss_pred CeeEEEEcCCCCccCCCCccCHHHHHHHHHHHHCC----CEEEEECCCChHHHHHHHHHcCCC----ccEEEeCCeEEec
Confidence 4799999999999 3569999999999999987 999999999999999999999983 3799999999998
Q ss_pred CCCCCCCCCCCCcccCcchhhhhccccCcchHHHHHHHHhh---h---ccCCCCcc----Cc-------------ccccc
Q 002665 686 PSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAA---S---VNDKKGEE----GK-------------IVEED 742 (895)
Q Consensus 686 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~----~~-------------~~~~~ 742 (895)
.+ +.. ....+..+.+..++..... . ........ .. .....
T Consensus 74 ~~---------~~i--------~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (264)
T COG0561 74 GG---------ELL--------FQKPLSREDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGRE 136 (264)
T ss_pred CC---------cEE--------eeecCCHHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccc
Confidence 63 111 1111122222222211100 0 00000000 00 00000
Q ss_pred cccccceEEEEEecCCCCCcCHHHHHHHHHhhcC--eEEEEEeeCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEe
Q 002665 743 ESRSTIHCYAFEVTNPQMIPPVKELRKLMRIQAL--RCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIA 820 (895)
Q Consensus 743 ~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~lgi~~~~viafg 820 (895)
.......++....... ....++.+.+.+... ...+..|.+. ++||+|+|+|||.||++|++++|++++++|| +
T Consensus 137 ~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~s~~~-~lei~~~g~~K~~al~~l~~~lgi~~~~v~a-f 211 (264)
T COG0561 137 AAELEDNKIIALDKDH---EILEELVEALRKRFPDLGLTVSSSGPI-SLDITPKGVSKGYALQRLAKLLGIKLEEVIA-F 211 (264)
T ss_pred hhhcCcceEEEEecCh---HhHHHHHHHHhhhccccceEEEEcCCc-eEEEecCCCchHHHHHHHHHHhCCCHHHeEE-e
Confidence 0000011222221111 223455555554422 3444444443 5999999999999999999999999999999 6
Q ss_pred CcCCCccccccccCcceEEEEcCchhhhHhhhhcCCCCCCCcccCCCCceEEeccccChHHHHHHHHHhccc
Q 002665 821 GECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGVL 892 (895)
Q Consensus 821 GD~nn~D~~~Ml~~ag~gVaMgNA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~gI~~al~~~~~~ 892 (895)
||+.| | ++||+.+|+|||||||. +.+|..+.++|.+.+++||+++|+++.++
T Consensus 212 GD~~N-D-~~Ml~~ag~gvam~Na~------------------~~~k~~A~~vt~~n~~~Gv~~~l~~~~~~ 263 (264)
T COG0561 212 GDSTN-D-IEMLEVAGLGVAMGNAD------------------EELKELADYVTTSNDEDGVAEALEKLLLL 263 (264)
T ss_pred CCccc-c-HHHHHhcCeeeeccCCC------------------HHHHhhCCcccCCccchHHHHHHHHHhcc
Confidence 77777 7 99999999999999999 66666666999999999999999999875
No 68
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.97 E-value=6.2e-29 Score=277.92 Aligned_cols=283 Identities=30% Similarity=0.450 Sum_probs=225.1
Q ss_pred CCCcEEEeccC-CchHHHHHHhccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEe
Q 002665 146 IWPVAIHGHYA-DAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVIT 224 (895)
Q Consensus 146 ~~pDvIh~h~~-~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~ 224 (895)
.+||+||+|+. ....++..+++..++|++++.|+......... ...+ ..+...++.+|.+++
T Consensus 92 ~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~---------------~~~~--~~~~~~~~~~d~ii~ 154 (377)
T cd03798 92 FRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRK---------------RLLR--ALLRRALRRADAVIA 154 (377)
T ss_pred CCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCch---------------hhHH--HHHHHHHhcCCeEEe
Confidence 57999999975 45666778888889999999998755431100 0111 125567899999999
Q ss_pred cCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchh
Q 002665 225 STRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIW 304 (895)
Q Consensus 225 ~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (895)
.|+...+.+...+ . .. .++.++|||+|...+.+.....
T Consensus 155 ~s~~~~~~~~~~~-~-~~---------------------~~~~~i~~~~~~~~~~~~~~~~------------------- 192 (377)
T cd03798 155 VSEALADELKALG-I-DP---------------------EKVTVIPNGVDTERFSPADRAE------------------- 192 (377)
T ss_pred CCHHHHHHHHHhc-C-CC---------------------CceEEcCCCcCcccCCCcchHH-------------------
Confidence 9998877665543 1 11 2899999999998776533110
Q ss_pred hhhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhhhHHHHHHHHHHHHHcCC
Q 002665 305 SEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDL 383 (895)
Q Consensus 305 ~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~l~~~~~~~~~~i~~~~~~~~l 383 (895)
. .+.....+++.|+++|++.+.||++.+++++..+.+. .+++.+ ++|.++.. ..+...++++++
T Consensus 193 ~--~~~~~~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~--~~~~~l~i~g~~~~~-----------~~~~~~~~~~~~ 257 (377)
T cd03798 193 A--RKLGLPEDKKVILFVGRLVPRKGIDYLIEALARLLKK--RPDVHLVIVGDGPLR-----------EALEALAAELGL 257 (377)
T ss_pred H--HhccCCCCceEEEEeccCccccCHHHHHHHHHHHHhc--CCCeEEEEEcCCcch-----------HHHHHHHHhcCC
Confidence 0 1112235678999999999999999999999998653 345555 66766543 234456677888
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCHHH
Q 002665 384 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQS 463 (895)
Q Consensus 384 ~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~ 463 (895)
.++|.+.|+++.+++..+|+.| |++++|+..|++|++++|||++|+|||+++.|+..+++.++..|+++++.|+++
T Consensus 258 ~~~v~~~g~~~~~~~~~~~~~a----d~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~ 333 (377)
T cd03798 258 EDRVTFLGAVPHEEVPAYYAAA----DVFVLPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVPPGDPEA 333 (377)
T ss_pred cceEEEeCCCCHHHHHHHHHhc----CeeecchhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEECCCCHHH
Confidence 8999999999999999999999 999999999999999999999999999999999999999988899999999999
Q ss_pred HHHHHHHHhhCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHHHHHh
Q 002665 464 IADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRISSC 508 (895)
Q Consensus 464 la~ai~~ll~~~~~~~~~~~~~~~~v-~~~s~~~~a~~~~~~l~~~ 508 (895)
++++|.+++++++. ++.+++++.+ ++|+|+.+++++.+.++++
T Consensus 334 l~~~i~~~~~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l 377 (377)
T cd03798 334 LAEAILRLLADPWL--RLGRAARRRVAERFSWENVAERLLELYREV 377 (377)
T ss_pred HHHHHHHHhcCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHhhC
Confidence 99999999998876 6677777777 7999999999999998753
No 69
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.97 E-value=4.5e-31 Score=284.05 Aligned_cols=241 Identities=15% Similarity=0.160 Sum_probs=158.6
Q ss_pred cEEEEEEecCCCC---hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCceEecC
Q 002665 610 KYVFVIAADCDTT---SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYP 686 (895)
Q Consensus 610 ~kli~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~ 686 (895)
.|||++||||||. +.+++.++++|++++++| +.|+|||||++.++.++++++++. +++||+||+.|+..
T Consensus 2 ~kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~G----~~~~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~I~~~ 73 (272)
T PRK15126 2 ARLAAFDMDGTLLMPDHHLGEKTLSTLARLRERD----ITLTFATGRHVLEMQHILGALSLD----AYLITGNGTRVHSL 73 (272)
T ss_pred ccEEEEeCCCcCcCCCCcCCHHHHHHHHHHHHCC----CEEEEECCCCHHHHHHHHHHcCCC----CcEEecCCcEEEcC
Confidence 5899999999993 568999999999999987 999999999999999999999983 47999999999963
Q ss_pred CCCCCCCCCCCcccCcch-hhhh--------------ccccCc-chHHHHHHHHhhhccCCCCccCcccccccccccceE
Q 002665 687 SSSTEDNHGLPFLVDLDY-RFHT--------------EYRWGG-EGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHC 750 (895)
Q Consensus 687 ~~~~~~~~~~~~~~d~~~-~~~~--------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 750 (895)
.... . .....+... ...+ ...|.. .................. ..-..........|
T Consensus 74 ~~~~--l--~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~k 145 (272)
T PRK15126 74 EGEL--L--HRQDLPADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQ----LIDLKRLPAHGVTK 145 (272)
T ss_pred CCCE--E--EeecCCHHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceE----EecHHHccccCceE
Confidence 2110 0 000000000 0000 000100 000000000000000000 00000001123556
Q ss_pred EEEEecCCCCCcCHHHHHHHHHhh-cCeEEEEEeeCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEeCcCCCcccc
Q 002665 751 YAFEVTNPQMIPPVKELRKLMRIQ-ALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYE 829 (895)
Q Consensus 751 ~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~ 829 (895)
+.++. +++ .++++.+.+.+. ...+.+..|.+. ++||+|+|+|||+||++|++++||++++++| +||+.| | +
T Consensus 146 i~~~~-~~~---~~~~~~~~l~~~~~~~~~~~~s~~~-~~eI~~~g~sKg~al~~l~~~~gi~~~~v~a-fGD~~N-D-i 217 (272)
T PRK15126 146 ICFCG-DHD---DLTRLQIQLNEALGERAHLCFSATD-CLEVLPVGCNKGAALAVLSQHLGLSLADCMA-FGDAMN-D-R 217 (272)
T ss_pred EEEEC-CHH---HHHHHHHHHHHHhcCCEEEEEcCCc-EEEeecCCCChHHHHHHHHHHhCCCHHHeEE-ecCCHH-H-H
Confidence 65543 222 234555555443 345677777775 9999999999999999999999999999999 777777 7 9
Q ss_pred ccccCcceEEEEcCchhhhHhhhhcCCCCCCCcccCCCCceEEeccccChHHHHHHHHHhc
Q 002665 830 GLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLG 890 (895)
Q Consensus 830 ~Ml~~ag~gVaMgNA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~gI~~al~~~~ 890 (895)
+||+.+|+|||||||. +++|..++ ...||.++++|||+++|++|-
T Consensus 218 ~Ml~~ag~~vAm~Na~--~~vK~~A~--------------~~~v~~~n~edGva~~l~~~~ 262 (272)
T PRK15126 218 EMLGSVGRGFIMGNAM--PQLRAELP--------------HLPVIGHCRNQAVSHYLTHWL 262 (272)
T ss_pred HHHHHcCCceeccCCh--HHHHHhCC--------------CCeecCCCcchHHHHHHHHHh
Confidence 9999999999999999 44444333 113788999999999999874
No 70
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.97 E-value=2.4e-30 Score=272.12 Aligned_cols=233 Identities=21% Similarity=0.370 Sum_probs=170.2
Q ss_pred EEEEEecCCCCh---hhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCceEecCCC
Q 002665 612 VFVIAADCDTTS---DFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPSS 688 (895)
Q Consensus 612 li~~DiDGTL~~---~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~~ 688 (895)
||++|+||||.+ .+++.+ ++++ ++++ |+.|++||||++.++.++++++++ ..||++||+||+.|++..
T Consensus 1 li~~DlDgTLl~~~~~~~~~~-~~~~-~~~~----gi~~viaTGR~~~~v~~~~~~l~l--~~~~~~I~~nGa~i~~~~- 71 (236)
T TIGR02471 1 LIITDLDNTLLGDDEGLASFV-ELLR-GSGD----AVGFGIATGRSVESAKSRYAKLNL--PSPDVLIARVGTEIYYGP- 71 (236)
T ss_pred CeEEeccccccCCHHHHHHHH-HHHH-hcCC----CceEEEEeCCCHHHHHHHHHhCCC--CCCCEEEECCCceEEeCC-
Confidence 589999999953 344444 5555 4554 599999999999999999999998 357899999999998643
Q ss_pred CCCCCCCCCcccCcchhhhhccccCcchHHHHHHHHhhhccCCCCccCcccccccccccceEEEEEecCCCCCcCHHHHH
Q 002665 689 STEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMIPPVKELR 768 (895)
Q Consensus 689 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~ 768 (895)
....+..|...+...|....+...+...++...+ .......+|+.+... ++....+.++.
T Consensus 72 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~i~~~~~-~~~~~~~~~~~ 131 (236)
T TIGR02471 72 --------ELQPDRFWQKHIDHDWRRQAVVEALADIPGLTLQ-----------DDQEQGPFKISYLLD-PEGEPILPQIR 131 (236)
T ss_pred --------CCCCChhHHHHHhcCCCHHHHHHHHhcCCCcEeC-----------ChhcCCCeeEEEEEC-cccchHHHHHH
Confidence 2233455666666677655444444333322111 112234678887753 33233455667
Q ss_pred HHHHhhcCeEEEEEeeCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEEcCchhhh
Q 002665 769 KLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESA 848 (895)
Q Consensus 769 ~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaMgNA~~~~ 848 (895)
+.+...+..+.++.+++. ++||+|+++|||.|+++|++++|++++++++ +||+.| | ++||+.+|+||+|+||. .
T Consensus 132 ~~l~~~~~~~~~~~~~~~-~~ei~~~~~~K~~al~~l~~~~g~~~~~~i~-~GD~~n-D-~~ml~~~~~~iav~na~--~ 205 (236)
T TIGR02471 132 QRLRQQSQAAKVILSCGW-FLDVLPLRASKGLALRYLSYRWGLPLEQILV-AGDSGN-D-EEMLRGLTLGVVVGNHD--P 205 (236)
T ss_pred HHHHhccCCEEEEEECCc-eEEEeeCCCChHHHHHHHHHHhCCCHHHEEE-EcCCcc-H-HHHHcCCCcEEEEcCCc--H
Confidence 777766666777778775 8999999999999999999999999999999 666667 7 99999999999999999 4
Q ss_pred HhhhhcCCCCCCCcccCCCCceEEeccccChHHHHHHHHHhcc
Q 002665 849 RKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGV 891 (895)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~gI~~al~~~~~ 891 (895)
+++..++. ...+||++.+++||+++|+||++
T Consensus 206 ~~k~~a~~------------~~~~v~~~~~~~Gv~~~i~~~~~ 236 (236)
T TIGR02471 206 ELEGLRHQ------------QRIYFANNPHAFGILEGINHYDF 236 (236)
T ss_pred HHHHhhcC------------CcEEEcCCCChhHHHHHHHhhCC
Confidence 44433331 01278899999999999999985
No 71
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=99.97 E-value=1.7e-29 Score=284.96 Aligned_cols=313 Identities=13% Similarity=0.107 Sum_probs=239.7
Q ss_pred CcEEEeccCCchHHHHHHhcc-CCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecC
Q 002665 148 PVAIHGHYADAGDAAALLSGA-LNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITST 226 (895)
Q Consensus 148 pDvIh~h~~~~~~~~~~~~~~-~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s 226 (895)
-|+|..|.+....++..+.++ ...++-|..|-.++..-- +. ..-+...-...+-.||.|-..|
T Consensus 133 ~d~vWVhDYhL~llp~~LR~~~~~~~IgfFlHiPFPs~ei-fr---------------~LP~r~~ll~glL~aDliGFqt 196 (487)
T TIGR02398 133 GATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTPFPSADV-FN---------------ILPWREQIIGSLLCCDYIGFHI 196 (487)
T ss_pred CCEEEEecchhhHHHHHHHHhCCCCeEEEEeeCCCCChHH-Hh---------------hCCchHHHHHHHhcCCeEEeCC
Confidence 589999988666666666554 457899999987665411 10 0000011123577899999999
Q ss_pred HHHHHHHHHHhcCCChHHHHHHHHhH----------------------hccccccCCCCCCeEEeCCCCcCCCcccCCCC
Q 002665 227 RQEIEEQWRLYDGFDPVLERKLRARI----------------------KRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGD 284 (895)
Q Consensus 227 ~~~~~~~~~~y~~~~~~~~~~l~~~~----------------------~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~ 284 (895)
...++.+.... .++|+.+. .-+|+..||.+ ++.++|+|||++.|.+....
T Consensus 197 ~~y~~~Fl~~~-------~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v-~v~~~PiGID~~~f~~~~~~ 268 (487)
T TIGR02398 197 PRYVENFVDAA-------RGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVV-KLGAHPVGTDPERIRSALAA 268 (487)
T ss_pred HHHHHHHHHHH-------HHHhCCccccccccccccccccccccccccccceeECCEEE-EEEEEECEecHHHHHHHhcC
Confidence 99888776532 22332211 12366668877 89999999999999754311
Q ss_pred CCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEE-EEec-----
Q 002665 285 VDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGN----- 356 (895)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~--~l~l-ivG~----- 356 (895)
. ......+.+++.+ .++++|+++||+++.|||..+++||+++++.+|++ +++| .+|.
T Consensus 269 ~-------------~~~~~~~~lr~~~--~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr~~ 333 (487)
T TIGR02398 269 A-------------SIREMMERIRSEL--AGVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAASG 333 (487)
T ss_pred c-------------hHHHHHHHHHHHc--CCceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCccc
Confidence 1 1111222233322 37899999999999999999999999998777765 4444 3332
Q ss_pred CCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCC---
Q 002665 357 RDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGL--- 433 (895)
Q Consensus 357 ~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~--- 433 (895)
.+.|++++.+.++.+++||+.+++.+|.+.+++.+.++.+++.++|+.| ||+++||++||||||++||+||+.
T Consensus 334 v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~A----DV~lvT~lrDGmNLVa~Eyva~~~~~~ 409 (487)
T TIGR02398 334 MTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMA----DVMWITPLRDGLNLVAKEYVAAQGLLD 409 (487)
T ss_pred chHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhC----CEEEECccccccCcchhhHHhhhcCCC
Confidence 3567889999999999999999999999999999999999999999999 999999999999999999999954
Q ss_pred -CE-EEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Q 002665 434 -PI-VATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVS-DKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISS 507 (895)
Q Consensus 434 -PV-vat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~-~~~~~~~~~~~~~~~v~~~s~~~~a~~~~~~l~~ 507 (895)
|+ +|..+|+..++ ..+++|||+|++++|++|.++|+ ++++++++.+.+++.++++|...|++.|++.++.
T Consensus 410 GvLILSefaGaa~~l----~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 410 GVLVLSEFAGAAVEL----KGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQRWADEFLAAVSP 482 (487)
T ss_pred CCEEEeccccchhhc----CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhhh
Confidence 44 44555555444 57999999999999999999999 7789999999999999999999999999988764
No 72
>PLN02275 transferase, transferring glycosyl groups
Probab=99.96 E-value=6.4e-28 Score=271.42 Aligned_cols=336 Identities=15% Similarity=0.111 Sum_probs=221.9
Q ss_pred CCCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhhcccCCCCCcEEEEecCCCCCcc
Q 002665 29 SDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKY 108 (895)
Q Consensus 29 ~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~g~~i~r~~~~~~~~~ 108 (895)
||.|+.. ++.+++..|+++|+ ++|+++|.... +...+ ....++++|++++. +....
T Consensus 13 ~~~g~~~-r~~~~~~~l~~~~~-~~v~vi~~~~~--------~~~~~-------------~~~~~~v~v~r~~~-~~~~~ 68 (371)
T PLN02275 13 GDFGRSP-RMQYHALSLARQAS-FQVDVVAYGGS--------EPIPA-------------LLNHPSIHIHLMVQ-PRLLQ 68 (371)
T ss_pred cCCCCCH-HHHHHHHHHHhcCC-ceEEEEEecCC--------CCCHH-------------HhcCCcEEEEECCC-ccccc
Confidence 4566655 66789999999873 48999986421 11111 11235899999986 32111
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCc---hHHHHHHhccCCCCEEEEeCCCchhhH
Q 002665 109 VQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADA---GDAAALLSGALNVPMVFTGHSLGRDKL 185 (895)
Q Consensus 109 l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~---~~~~~~~~~~~~ip~v~t~H~~~~~~~ 185 (895)
....++..+ .+.......+..+...+..+ ..+||+||+|..++ ..++..+++..++|+|++.|+++..
T Consensus 69 -~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~-- 139 (371)
T PLN02275 69 -RLPRVLYAL-ALLLKVAIQFLMLLWFLCVK-----IPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYT-- 139 (371)
T ss_pred -ccccchHHH-HHHHHHHHHHHHHHHHHHhh-----CCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHH--
Confidence 111111100 01111111112221111100 15799999987533 4456667777899999999998532
Q ss_pred HHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCC
Q 002665 186 EQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPR 265 (895)
Q Consensus 186 ~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~ 265 (895)
....|..... ...++.+++ |+..++.||.|+++|+...+.+.+.++. +
T Consensus 140 --~~~~~~~~~~---~~~~~~~~~--e~~~~~~ad~ii~~S~~~~~~l~~~~g~-------------------------~ 187 (371)
T PLN02275 140 --LLALSLGRSH---PLVRLYRWY--ERHYGKMADGHLCVTKAMQHELDQNWGI-------------------------R 187 (371)
T ss_pred --HHhcccCCCC---HHHHHHHHH--HHHHHhhCCEEEECCHHHHHHHHHhcCC-------------------------C
Confidence 1122221111 122334443 7778999999999999887765443322 4
Q ss_pred eEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc-
Q 002665 266 MVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPL- 344 (895)
Q Consensus 266 v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~- 344 (895)
+.+||||+ .+.|.+..... .. ..+...+++++||+.+.||++.+++|+..+...
T Consensus 188 i~vi~n~~-~~~f~~~~~~~-----------------------~~-~~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~ 242 (371)
T PLN02275 188 ATVLYDQP-PEFFRPASLEI-----------------------RL-RPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRV 242 (371)
T ss_pred eEEECCCC-HHHcCcCCchh-----------------------cc-cCCCcEEEEEeCceeccCCHHHHHHHHHHHHhhh
Confidence 78999995 46665432110 00 112345788999999999999999999877311
Q ss_pred --------------cCCCcEEE-EEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEe-CCCCCCCcHHHHHHHhhcC
Q 002665 345 --------------RELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAY-PKHHKQSDVPDIYRLAAKT 408 (895)
Q Consensus 345 --------------~~~~~l~l-ivG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~-~g~~~~~el~~ly~~a~~~ 408 (895)
...+++.+ ++|+|+.. .++.++++++++.+ +.| .++++.++++.+|+.|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~i~l~ivG~G~~~-----------~~l~~~~~~~~l~~-v~~~~~~~~~~~~~~~l~~a--- 307 (371)
T PLN02275 243 AARLNESDSASGKQSLYPRLLFIITGKGPQK-----------AMYEEKISRLNLRH-VAFRTMWLEAEDYPLLLGSA--- 307 (371)
T ss_pred hhccccccccccccccCCCeEEEEEeCCCCH-----------HHHHHHHHHcCCCc-eEEEcCCCCHHHHHHHHHhC---
Confidence 12345654 78998864 34557888899977 665 4578999999999999
Q ss_pred CcEEEecC---CCCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHh
Q 002665 409 KGVFINPA---FIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLV 472 (895)
Q Consensus 409 ~Dv~v~ps---~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll 472 (895)
|++|+|+ ..|+||++++||||||+|||+++.||.+|++.++.+|++++ |+++++++|.++|
T Consensus 308 -Dv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~la~~i~~l~ 371 (371)
T PLN02275 308 -DLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDGKNGLLFS--SSSELADQLLELL 371 (371)
T ss_pred -CEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccCCCCeEEEC--CHHHHHHHHHHhC
Confidence 9999863 24889999999999999999999999999999999999996 7999999998875
No 73
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.96 E-value=5.5e-28 Score=270.65 Aligned_cols=265 Identities=19% Similarity=0.229 Sum_probs=197.8
Q ss_pred CCCcEEEeccCCchHHHHHHhccCCCCEEEEeCCCchhhH---HHHH-HhCCCChhhhhhHhhHHHhHHHHHhhccccCE
Q 002665 146 IWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKL---EQLL-KQGRLSRDEINTTYKIMRRIEAEELSLDASEI 221 (895)
Q Consensus 146 ~~pDvIh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~---~~~~-~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~ 221 (895)
.+||+||++.... +..+....++|.+++.|+..+..+ ..+. ..+...........+..++ .|...++.+|.
T Consensus 82 ~~~D~v~~~~~~~---~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~ 156 (351)
T cd03804 82 SGYDLVISSSHAV---AKGVITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRI--WDRRSAARVDY 156 (351)
T ss_pred cCCCEEEEcCcHH---hccccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHH--HHHHHhcCCCE
Confidence 4699999876422 222225568999999997422111 1111 1111111111112222222 46778999999
Q ss_pred EEecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCC
Q 002665 222 VITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDP 301 (895)
Q Consensus 222 vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~ 301 (895)
+++.|+...+.+.+.+.. +..++|||+|.+.|.+..
T Consensus 157 ii~~S~~~~~~~~~~~~~-------------------------~~~vi~~~~d~~~~~~~~------------------- 192 (351)
T cd03804 157 FIANSRFVARRIKKYYGR-------------------------DATVIYPPVDTDRFTPAE------------------- 192 (351)
T ss_pred EEECCHHHHHHHHHHhCC-------------------------CcEEECCCCCHhhcCcCC-------------------
Confidence 999999888777555433 568999999988775421
Q ss_pred chhhhhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHc
Q 002665 302 PIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKY 381 (895)
Q Consensus 302 ~~~~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~ 381 (895)
...+.++++||+.+.||++.+++|+.++. .++ +++|+++..+.+ .+
T Consensus 193 ------------~~~~~il~~G~~~~~K~~~~li~a~~~~~-----~~l-~ivG~g~~~~~l-----------~~----- 238 (351)
T cd03804 193 ------------EKEDYYLSVGRLVPYKRIDLAIEAFNKLG-----KRL-VVIGDGPELDRL-----------RA----- 238 (351)
T ss_pred ------------CCCCEEEEEEcCccccChHHHHHHHHHCC-----CcE-EEEECChhHHHH-----------Hh-----
Confidence 23567999999999999999999999873 344 578887643222 11
Q ss_pred CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCH
Q 002665 382 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQ 461 (895)
Q Consensus 382 ~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~ 461 (895)
+..++|.|.|+++.+++..+|+.| |++++|+. |+||++++||||||+|||+++.||..|++.++.+|++++|.|+
T Consensus 239 ~~~~~V~~~g~~~~~~~~~~~~~a----d~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~ 313 (351)
T cd03804 239 KAGPNVTFLGRVSDEELRDLYARA----RAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQTV 313 (351)
T ss_pred hcCCCEEEecCCCHHHHHHHHHhC----CEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEeCCCCH
Confidence 445789999999999999999999 99999999 9999999999999999999999999999999889999999999
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHHHhhCCHHHHHHHH
Q 002665 462 QSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSY 501 (895)
Q Consensus 462 ~~la~ai~~ll~~~~~~~~~~~~~~~~v~~~s~~~~a~~~ 501 (895)
++++++|.+++++++ .+.+.+++.+++|+|+.+.+++
T Consensus 314 ~~la~~i~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 350 (351)
T cd03804 314 ESLAAAVERFEKNED---FDPQAIRAHAERFSESRFREKI 350 (351)
T ss_pred HHHHHHHHHHHhCcc---cCHHHHHHHHHhcCHHHHHHHh
Confidence 999999999999874 3445566666789999988765
No 74
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.96 E-value=1.4e-27 Score=264.75 Aligned_cols=268 Identities=25% Similarity=0.305 Sum_probs=207.1
Q ss_pred CCCcEEEeccC-CchHHHHHHhccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEe
Q 002665 146 IWPVAIHGHYA-DAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVIT 224 (895)
Q Consensus 146 ~~pDvIh~h~~-~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~ 224 (895)
.+||+||++.. .+..++....+. ++|++++.|+.......... . .. ..+...++.+|.+++
T Consensus 80 ~~~dii~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~------~-----~~------~~~~~~~~~~d~ii~ 141 (353)
T cd03811 80 EKPDVVISHLTTTPNVLALLAARL-GTKLIVWEHNSLSLELKRKL------R-----LL------LLIRKLYRRADKIVA 141 (353)
T ss_pred cCCCEEEEcCccchhHHHHHHhhc-CCceEEEEcCcchhhhccch------h-----HH------HHHHhhccccceEEE
Confidence 46999999987 444444444444 89999999998654321110 0 00 235667999999999
Q ss_pred cCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchh
Q 002665 225 STRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIW 304 (895)
Q Consensus 225 ~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (895)
.|+...+.+...+... + .++.++|||+|...+.+.....
T Consensus 142 ~s~~~~~~~~~~~~~~-~---------------------~~~~vi~~~~~~~~~~~~~~~~------------------- 180 (353)
T cd03811 142 VSEGVKEDLLKLLGIP-P---------------------DKIEVIYNPIDIEEIRALAEEP------------------- 180 (353)
T ss_pred eccchhhhHHHhhcCC-c---------------------cccEEecCCcChhhcCcccchh-------------------
Confidence 9998887776665431 1 1899999999988775432110
Q ss_pred hhhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCC
Q 002665 305 SEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLY 384 (895)
Q Consensus 305 ~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~ 384 (895)
. ......++++|+++||+.+.||++.+++++..+....+...+ +++|.++..+ .+.+.+.++++.
T Consensus 181 ~---~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l-~i~G~~~~~~-----------~~~~~~~~~~~~ 245 (353)
T cd03811 181 L---ELGIPPDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARL-VILGDGPLRE-----------ELEALAKELGLA 245 (353)
T ss_pred h---hcCCCCCceEEEEEecchhhcChHHHHHHHHHhhhcCCCceE-EEEcCCccHH-----------HHHHHHHhcCCC
Confidence 0 112245678999999999999999999999999654333333 3677766433 334677888998
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCHHHH
Q 002665 385 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSI 464 (895)
Q Consensus 385 ~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~l 464 (895)
++|.+.|+. +++..+|+.| |++++||..|++|++++|||++|+|||+++.|+..|++.++.+|+++++.|.+++
T Consensus 246 ~~v~~~g~~--~~~~~~~~~~----d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~ 319 (353)
T cd03811 246 DRVHFLGFQ--SNPYPYLKAA----DLFVLSSRYEGFPNVLLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAAL 319 (353)
T ss_pred ccEEEeccc--CCHHHHHHhC----CEEEeCcccCCCCcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEECCCCHHHH
Confidence 999999984 6899999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred ---HHHHHHHhhCHHHHHHHHHHHHHHH-hhCC
Q 002665 465 ---ADALLKLVSDKQLWERCRQNGLKNI-HQFS 493 (895)
Q Consensus 465 ---a~ai~~ll~~~~~~~~~~~~~~~~v-~~~s 493 (895)
.++|..++++++.+.++.+++++.+ ++|+
T Consensus 320 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (353)
T cd03811 320 AAAALALLDLLLDPELRERLAAAARERVAREYS 352 (353)
T ss_pred HHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc
Confidence 7777787889999999999777776 5775
No 75
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.96 E-value=2.3e-28 Score=278.27 Aligned_cols=276 Identities=17% Similarity=0.241 Sum_probs=217.7
Q ss_pred CCCcEEEeccCC-chHHHHHHhccCCCC-EEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEE
Q 002665 146 IWPVAIHGHYAD-AGDAAALLSGALNVP-MVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVI 223 (895)
Q Consensus 146 ~~pDvIh~h~~~-~~~~~~~~~~~~~ip-~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi 223 (895)
.++|++|+++.. .++.+..+.+..+.+ +|.+.|+..... ... ...+. ...+..++.+|.|+
T Consensus 126 ~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~--~~~----------~~~~~-----~~~~~~~~~~d~ii 188 (407)
T cd04946 126 GQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYE--DRY----------PSGYI-----PLRRYLLSSLDAVF 188 (407)
T ss_pred cCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhh--hhc----------cccch-----HHHHHHHhcCCEEE
Confidence 458899997654 344455666666766 999999763211 100 00111 11334588999999
Q ss_pred ecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCch
Q 002665 224 TSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPI 303 (895)
Q Consensus 224 ~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (895)
+.|+...+.+.+.|+.... ++.++|+|++...+.+..
T Consensus 189 ~~S~~~~~~l~~~~~~~~~----------------------ki~vi~~gv~~~~~~~~~--------------------- 225 (407)
T cd04946 189 PCSEQGRNYLQKRYPAYKE----------------------KIKVSYLGVSDPGIISKP--------------------- 225 (407)
T ss_pred ECCHHHHHHHHHHCCCccc----------------------cEEEEECCcccccccCCC---------------------
Confidence 9999988877766654322 889999999987664321
Q ss_pred hhhhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhhhHHHHHHHHHHHHHcC
Q 002665 304 WSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYD 382 (895)
Q Consensus 304 ~~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~l~~~~~~~~~~i~~~~~~~~ 382 (895)
...+.+.|+++||+.+.||++.+++|+.++.+..+..++.+ ++|+++.. ..+..++...+
T Consensus 226 --------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~~-----------~~l~~~~~~~~ 286 (407)
T cd04946 226 --------SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPLE-----------DTLKELAESKP 286 (407)
T ss_pred --------CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchHH-----------HHHHHHHHhcC
Confidence 12356789999999999999999999999976555556654 67887643 33445666777
Q ss_pred CCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCC-CH
Q 002665 383 LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPH-DQ 461 (895)
Q Consensus 383 l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~-d~ 461 (895)
..++|.|+|+++.+++..+|+.+ ..|++++||..||+|++++||||||+|||+|+.||..|++.++.+|+++++. |+
T Consensus 287 ~~~~V~f~G~v~~~e~~~~~~~~--~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~ 364 (407)
T cd04946 287 ENISVNFTGELSNSEVYKLYKEN--PVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSKDPTP 364 (407)
T ss_pred CCceEEEecCCChHHHHHHHhhc--CCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEeCCCCCH
Confidence 77899999999999999999863 1189999999999999999999999999999999999999998899999874 89
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHHH-hhCCHHHHHHHHH
Q 002665 462 QSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYL 502 (895)
Q Consensus 462 ~~la~ai~~ll~~~~~~~~~~~~~~~~v-~~~s~~~~a~~~~ 502 (895)
++++++|.++++|++.++++++++++.+ ++|||+.+.++|.
T Consensus 365 ~~la~~I~~ll~~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 365 NELVSSLSKFIDNEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 9999999999999999999999999999 6999999998875
No 76
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=99.96 E-value=8.5e-29 Score=275.71 Aligned_cols=332 Identities=15% Similarity=0.110 Sum_probs=255.7
Q ss_pred HHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHHhcc-CCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhH
Q 002665 127 THIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGA-LNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKI 205 (895)
Q Consensus 127 ~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~~~~-~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~ 205 (895)
+..+.+++.+.+... .-|+|..|.+....++..+.++ ...++-|..|-.++..- ++. .
T Consensus 108 ~VN~~FA~~v~~~~~-----~~D~VWVHDYhL~llp~~LR~~~~~~~IgFFlHiPFPs~e--ifr--------------~ 166 (474)
T PRK10117 108 RVNALLADKLLPLLK-----DDDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIPFPTPE--IFN--------------A 166 (474)
T ss_pred HHHHHHHHHHHHhcC-----CCCEEEEeccHhhHHHHHHHHhCCCCcEEEEEeCCCCChH--HHh--------------h
Confidence 333445555554322 2589999988666666666544 46789999998766541 110 0
Q ss_pred HHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHHHHHhHh--ccccccCCCCCCeEEeCCCCcCCCcccCCC
Q 002665 206 MRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIK--RGVSCHGRFMPRMVVIPPGIEFHHIVRHNG 283 (895)
Q Consensus 206 ~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~--~gv~~~g~~~~~v~vip~Gid~~~f~~~~~ 283 (895)
.-+...-...+-.||.|-..|...++.+.... .++|+.+.. ..+...||.+ ++.++|.|||++.|.....
T Consensus 167 LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~-------~~~lg~~~~~~~~v~~~gr~v-~v~~~PigID~~~~~~~a~ 238 (474)
T PRK10117 167 LPPHDELLEQLCDYDLLGFQTENDRLAFLDCL-------SNLTRVTTRSGKSHTAWGKAF-RTEVYPIGIEPDEIAKQAA 238 (474)
T ss_pred CCChHHHHHHHHhCccceeCCHHHHHHHHHHH-------HHHcCCcccCCCeEEECCeEE-EEEEEECeEcHHHHHHHhh
Confidence 00001112357789999999998888776532 122322221 2244557777 8999999999999864321
Q ss_pred CCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEEE--E----e
Q 002665 284 DVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTLI--M----G 355 (895)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~--~l~li--v----G 355 (895)
. +.......++... .++++|+.++|+|+.|||...++||++|++.+|++ +++++ + +
T Consensus 239 ~--------------~~~~~~~~lr~~~--~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR~ 302 (474)
T PRK10117 239 G--------------PLPPKLAQLKAEL--KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRG 302 (474)
T ss_pred c--------------hHHHHHHHHHHHc--CCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCCC
Confidence 1 0111222333322 46889999999999999999999999998888876 44443 2 4
Q ss_pred cCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHc----
Q 002665 356 NRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAY---- 431 (895)
Q Consensus 356 ~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~---- 431 (895)
+.+.|.+++.+.++.+++||+.+++.+|.|..++...++++++.++|+.| ||+++||++||||||++||+||
T Consensus 303 ~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~A----Dv~lVTplRDGMNLVAkEyva~q~~~ 378 (474)
T PRK10117 303 DVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYS----DVGLVTPLRDGMNLVAKEYVAAQDPA 378 (474)
T ss_pred ccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhc----cEEEecccccccccccchheeeecCC
Confidence 56778899999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred --CCCEEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHh
Q 002665 432 --GLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVS-DKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSC 508 (895)
Q Consensus 432 --G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~-~~~~~~~~~~~~~~~v~~~s~~~~a~~~~~~l~~~ 508 (895)
|+.|+|+.+|++.++ ..+++|||+|+++++++|.++|+ ++++++++.+.+++.+..+|...|++.|++.++.+
T Consensus 379 ~~GvLILSefAGaA~~L----~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~ 454 (474)
T PRK10117 379 NPGVLVLSQFAGAANEL----TSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQI 454 (474)
T ss_pred CCccEEEecccchHHHh----CCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHh
Confidence 789999999999988 57999999999999999999999 88999999999999999999999999999999987
Q ss_pred hhc
Q 002665 509 KQR 511 (895)
Q Consensus 509 ~~~ 511 (895)
..+
T Consensus 455 ~~~ 457 (474)
T PRK10117 455 VPR 457 (474)
T ss_pred hhc
Confidence 644
No 77
>PLN02887 hydrolase family protein
Probab=99.96 E-value=1.7e-29 Score=290.75 Aligned_cols=249 Identities=14% Similarity=0.074 Sum_probs=159.7
Q ss_pred cccccEEEEEEecCCCC---hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCC-------EE
Q 002665 606 LRRRKYVFVIAADCDTT---SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFD-------AF 675 (895)
Q Consensus 606 ~~~~~kli~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d-------~~ 675 (895)
...+.|+|++||||||. +.+++.++++|++++++| +.|+|||||++.++.++++++++. .++ ++
T Consensus 304 ~~~~iKLIa~DLDGTLLn~d~~Is~~t~eAI~kl~ekG----i~~vIATGR~~~~i~~~l~~L~l~--~~~~~I~~~~p~ 377 (580)
T PLN02887 304 YKPKFSYIFCDMDGTLLNSKSQISETNAKALKEALSRG----VKVVIATGKARPAVIDILKMVDLA--GKDGIISESSPG 377 (580)
T ss_pred hccCccEEEEeCCCCCCCCCCccCHHHHHHHHHHHHCC----CeEEEEcCCCHHHHHHHHHHhCcc--cccceEeecccE
Confidence 34578999999999993 568999999999999997 999999999999999999998872 223 45
Q ss_pred EeCCCceEecCCCCCCCCCCCCcccCcchhhh---------------hccccCcchHHHHHHHHhhhccCCCCccCcccc
Q 002665 676 ICNSGSELYYPSSSTEDNHGLPFLVDLDYRFH---------------TEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVE 740 (895)
Q Consensus 676 I~~nGa~I~~~~~~~~~~~~~~~~~d~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (895)
||+||+.|+...... . +....+...... ....|..........................+.
T Consensus 378 I~~NGA~I~d~~g~~--I--~~~~L~~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~i~~l~ 453 (580)
T PLN02887 378 VFLQGLLVYGRQGRE--I--YRSNLDQEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEIMSSVD 453 (580)
T ss_pred EeecCeEEEECCCcE--E--EEEeCCHHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhccccccccCCHH
Confidence 677999998532110 0 000000000000 000000000000000000000000000000000
Q ss_pred cccccccceEEEEEecCCCCCcCHHHHHHHHHh-hcCeEEEEEeeCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEE
Q 002665 741 EDESRSTIHCYAFEVTNPQMIPPVKELRKLMRI-QALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVI 819 (895)
Q Consensus 741 ~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~lgi~~~~viaf 819 (895)
+........|+.+.. .++ ....++.+.+.+ ....+.++.+.+. ++||+|+|+|||+||++||+++||+++++||
T Consensus 454 ~~~~~~~i~Ki~~~~-~~e--~~~~~l~~~l~~~~~~~~~v~~S~~~-~lEI~p~gvSKG~ALk~L~e~lGI~~eeviA- 528 (580)
T PLN02887 454 QLLAAADIQKVIFLD-TAE--GVSSVLRPYWSEATGDRANVVQAQPD-MLEIVPPGTSKGNGVKMLLNHLGVSPDEIMA- 528 (580)
T ss_pred HhhcccCeeEEEEEc-ChH--HHHHHHHHHHHHHhcCcEEEEEecCc-EEEEecCCCCHHHHHHHHHHHcCCCHHHEEE-
Confidence 000112345655542 221 112234444433 2345788888876 9999999999999999999999999999999
Q ss_pred eCcCCCccccccccCcceEEEEcCchhhhHhhhhcCCCCCCCcccCCCCceEEeccccChHHHHHHHHHh
Q 002665 820 AGECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKL 889 (895)
Q Consensus 820 gGD~nn~D~~~Ml~~ag~gVaMgNA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~gI~~al~~~ 889 (895)
+||+.| | ++||+.+|+|||||||. +.+|..+++||.++++|||+++|++|
T Consensus 529 FGDs~N-D-IeMLe~AG~gVAMgNA~------------------eeVK~~Ad~VT~sNdEDGVA~aLek~ 578 (580)
T PLN02887 529 IGDGEN-D-IEMLQLASLGVALSNGA------------------EKTKAVADVIGVSNDEDGVADAIYRY 578 (580)
T ss_pred Eecchh-h-HHHHHHCCCEEEeCCCC------------------HHHHHhCCEEeCCCCcCHHHHHHHHh
Confidence 666666 7 99999999999999999 55555556999999999999999987
No 78
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=99.96 E-value=1e-28 Score=283.77 Aligned_cols=360 Identities=15% Similarity=0.129 Sum_probs=244.5
Q ss_pred CcEEEEecCCCCC-----ccccccccCCCchh------HHHHHHHHH----HHHHHHhhhhcCCCCCCCCcEEEeccCCc
Q 002665 94 GAYIIRIPFGPKD-----KYVQKELLWPHIPE------FVDAALTHI----IQISKVLGEQVGSGQPIWPVAIHGHYADA 158 (895)
Q Consensus 94 g~~i~r~~~~~~~-----~~l~k~~~~~~l~~------f~~~~~~~~----~~~~~~l~~~~~~~~~~~pDvIh~h~~~~ 158 (895)
+.+++.+...+.. ....+..+||.+.. |....+... +.++..+.+... ..|+|++|.+..
T Consensus 68 ~~~~~~v~l~~~~~~~~y~~f~~~~LWp~~H~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~-----~~d~iwihDyhl 142 (460)
T cd03788 68 EYTVAPVFLSPEEFEGYYNGFSNEVLWPLFHYRLDLARFDREDWEAYVRVNRKFADAIAEVLR-----PGDLVWVHDYHL 142 (460)
T ss_pred CceEEEeeCCHHHHHHHHHHhhhhhcchhhcCCCCccccCHHHHHHHHHHHHHHHHHHHHhcC-----CCCEEEEeChhh
Confidence 5666666543321 11224556765543 223333333 344444444322 379999999866
Q ss_pred hHHHHHHhcc-CCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHh
Q 002665 159 GDAAALLSGA-LNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLY 237 (895)
Q Consensus 159 ~~~~~~~~~~-~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y 237 (895)
..++..+.++ .+.|+++..|-.++..- .+... .....+ ...+..+|.|...+...+..+....
T Consensus 143 ~llp~~lr~~~~~~~i~~f~HipfP~~e-~~~~l--------p~~~~l-------l~~~l~~D~igF~t~~~~~~Fl~~~ 206 (460)
T cd03788 143 LLLPQMLRERGPDARIGFFLHIPFPSSE-IFRCL--------PWREEL-------LRGLLGADLIGFQTERYARNFLSCC 206 (460)
T ss_pred hHHHHHHHhhCCCCeEEEEEeCCCCChH-HHhhC--------CChHHH-------HHHHhcCCEEEECCHHHHHHHHHHH
Confidence 6666656543 46899999997765441 11100 000111 1235569999999988777665532
Q ss_pred cCCChHHHHHHHHhH--hccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhh-hhccCCC
Q 002665 238 DGFDPVLERKLRARI--KRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEI-MHFFSNP 314 (895)
Q Consensus 238 ~~~~~~~~~~l~~~~--~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 314 (895)
. +.+.... ..++...|+.. ++.+||||||++.|.+..... ...... ......+
T Consensus 207 ~-------~~l~~~~~~~~~i~~~g~~~-~i~vip~GID~~~f~~~~~~~----------------~~~~~~~~~~~~~~ 262 (460)
T cd03788 207 S-------RLLGLEVTDDGGVEYGGRRV-RVGAFPIGIDPDAFRKLAASP----------------EVQERAAELRERLG 262 (460)
T ss_pred H-------HHcCCcccCCceEEECCEEE-EEEEEeCeEcHHHHHHHhcCc----------------hhHHHHHHHHHhcC
Confidence 1 1111111 24455556555 799999999999997543111 011111 1112246
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEE-EEec-----CCCchhhhhhhHHHHHHHHHHHHHcCCCCC
Q 002665 315 RKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGN-----RDDIDEMSGTNAALLLSILKLIDKYDLYGQ 386 (895)
Q Consensus 315 ~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~--~l~l-ivG~-----~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~ 386 (895)
++++|+++||+++.||+..+++||+.+++..+.+ +++| ++|. ++.+.+++++..+.+.+++...+..++.+.
T Consensus 263 ~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v 342 (460)
T cd03788 263 GRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPV 342 (460)
T ss_pred CCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeE
Confidence 7899999999999999999999999987655543 3444 4443 234445555555555555554444456677
Q ss_pred EEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCC----EEEcCCCCcccccccCCceEEeCCCCHH
Q 002665 387 VAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLP----IVATKNGGPVDIHRVLDNGLLVDPHDQQ 462 (895)
Q Consensus 387 v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~P----Vvat~~gg~~eiv~~~~~g~lv~p~d~~ 462 (895)
+.+.|.++.+++.++|+.| |+||+||.+||||++++||||||+| ||+++.+|..+. +.+|++|+|+|++
T Consensus 343 ~~~~g~v~~~el~~~y~~a----Dv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---~~~g~lv~p~d~~ 415 (460)
T cd03788 343 RYLYRSLPREELAALYRAA----DVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE---LSGALLVNPYDID 415 (460)
T ss_pred EEEeCCCCHHHHHHHHHhc----cEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh---cCCCEEECCCCHH
Confidence 7778899999999999999 9999999999999999999999999 888887776666 3689999999999
Q ss_pred HHHHHHHHHhh-CHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Q 002665 463 SIADALLKLVS-DKQLWERCRQNGLKNIHQFSWPEHCKSYLSRI 505 (895)
Q Consensus 463 ~la~ai~~ll~-~~~~~~~~~~~~~~~v~~~s~~~~a~~~~~~l 505 (895)
+++++|.++++ ++++++.+++++++.+++|||..|+++|++.+
T Consensus 416 ~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~l 459 (460)
T cd03788 416 EVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDL 459 (460)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHhh
Confidence 99999999998 66889999999999999999999999999765
No 79
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.96 E-value=1.7e-27 Score=274.56 Aligned_cols=281 Identities=17% Similarity=0.180 Sum_probs=208.6
Q ss_pred CCCcEEEeccCCchHHHHHHhccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEec
Q 002665 146 IWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITS 225 (895)
Q Consensus 146 ~~pDvIh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~ 225 (895)
.++||+|++.......+ .+....++|.++++|+..... ......... ..+++.. .....+.+|.+|++
T Consensus 210 ~~~di~i~dr~~~~~~~-~~~~~~~~~~v~~lH~~h~~~-------~~~~~~~~~-~~~~y~~---~~~~~~~~D~iI~~ 277 (500)
T TIGR02918 210 TKKDIIILDRSTGIGQA-VLENKGPAKLGVVVHAEHFSE-------SATNETYIL-WNNYYEY---QFSNADYIDFFITA 277 (500)
T ss_pred CCCCEEEEcCCcccchH-HHhcCCCceEEEEEChhhhcC-------ccCcchhHH-HHHHHHH---HHhchhhCCEEEEC
Confidence 35999999876432222 345556899999999742111 100000000 0011111 12236778999999
Q ss_pred CHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhh
Q 002665 226 TRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWS 305 (895)
Q Consensus 226 s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (895)
|+...+.+...++.+. ...+++.+||+|++...+.+..
T Consensus 278 S~~~~~~l~~~~~~~~-------------------~~~~ki~viP~g~~~~~~~~~~----------------------- 315 (500)
T TIGR02918 278 TDIQNQILKNQFKKYY-------------------NIEPRIYTIPVGSLDELQYPEQ----------------------- 315 (500)
T ss_pred CHHHHHHHHHHhhhhc-------------------CCCCcEEEEcCCCcccccCccc-----------------------
Confidence 9977766655443211 0012899999998755432210
Q ss_pred hhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhhhHHHHHHHHHHHHHcCCC
Q 002665 306 EIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLY 384 (895)
Q Consensus 306 ~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~ 384 (895)
......|+++||+.+.||++.+|+|+..+.+..+ ++.| ++|+++.. ..+.+++.++++.
T Consensus 316 -------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p--~~~l~i~G~G~~~-----------~~l~~~i~~~~l~ 375 (500)
T TIGR02918 316 -------ERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVP--ELTFDIYGEGGEK-----------QKLQKIINENQAQ 375 (500)
T ss_pred -------ccCCeEEEEEeccccccCHHHHHHHHHHHHhhCC--CeEEEEEECchhH-----------HHHHHHHHHcCCC
Confidence 1234679999999999999999999999865444 5554 67887642 4566788888999
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCC-CcccccccCCceEEeCCC----
Q 002665 385 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNG-GPVDIHRVLDNGLLVDPH---- 459 (895)
Q Consensus 385 ~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~g-g~~eiv~~~~~g~lv~p~---- 459 (895)
++|.|.|+ .++..+|+.| |++|+||..||||++++||||||+|||+++.+ |++|++.++.+|+++++.
T Consensus 376 ~~V~f~G~---~~~~~~~~~a----dv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~ 448 (500)
T TIGR02918 376 DYIHLKGH---RNLSEVYKDY----ELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEED 448 (500)
T ss_pred CeEEEcCC---CCHHHHHHhC----CEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCcccc
Confidence 99999996 3799999999 99999999999999999999999999999986 899999999999999743
Q ss_pred C----HHHHHHHHHHHhhCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHh
Q 002665 460 D----QQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSC 508 (895)
Q Consensus 460 d----~~~la~ai~~ll~~~~~~~~~~~~~~~~v~~~s~~~~a~~~~~~l~~~ 508 (895)
| +++++++|.++++ ++.++++++++++.+++|||+.++++|.++++++
T Consensus 449 d~~~~~~~la~~I~~ll~-~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~~~ 500 (500)
T TIGR02918 449 DEDQIITALAEKIVEYFN-SNDIDAFHEYSYQIAEGFLTANIIEKWKKLVREV 500 (500)
T ss_pred chhHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 3 8899999999995 5578999999999889999999999999998764
No 80
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=99.96 E-value=4.8e-27 Score=273.26 Aligned_cols=552 Identities=15% Similarity=0.089 Sum_probs=375.3
Q ss_pred CcEEEeccCCchHHHHHHhcc-CCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecC
Q 002665 148 PVAIHGHYADAGDAAALLSGA-LNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITST 226 (895)
Q Consensus 148 pDvIh~h~~~~~~~~~~~~~~-~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s 226 (895)
-|+|..|....-.+...+... ..+.+-+..|+.++..-. + +..-+...-...+..++.+-..+
T Consensus 141 ~d~vwihdyhlmllp~~lr~~~~~~~ig~flhspfpssEi-~---------------r~lp~r~eIl~gll~~~~i~f~t 204 (732)
T KOG1050|consen 141 GDIVWIHDYHLMLLPQMLRERFNSAKIGFFLHSPFPSSEI-Y---------------RCLPVRKEILRGLLYDDLLGFHT 204 (732)
T ss_pred CCcEEEEcchhhccchhhhcccccceEEEeccCCCChHHH-H---------------HhcccHHHHHHhhhccCcccccc
Confidence 677777765433333334443 355666777876553311 1 00000001122456777777666
Q ss_pred HHHHHHHHHHhcCCChHHHHHHHHhH-----hccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCC
Q 002665 227 RQEIEEQWRLYDGFDPVLERKLRARI-----KRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDP 301 (895)
Q Consensus 227 ~~~~~~~~~~y~~~~~~~~~~l~~~~-----~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~ 301 (895)
.+....+.... .|.|+... .-||+..||.. .+..+|.|||..+|....... ...
T Consensus 205 ~d~arhFls~c-------~R~l~~~~~s~~~~~~v~~rgr~~-~v~~~pigid~~r~v~~~~~~-------------~~~ 263 (732)
T KOG1050|consen 205 DDYARHFLSTC-------SRLLGLEVASKFPTAGVSGRGRDV-SVKALPIGIDVQRFVKLLELP-------------YVG 263 (732)
T ss_pred ccHHHHHHHHH-------HHHHHhhhhccCCcceEEecccee-eeeecccccchHHhhccccch-------------hHH
Confidence 66555443321 23333332 34577777777 899999999999886433111 111
Q ss_pred chhhhhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEEEE------ecCCCchhhhhhhHHHHHH
Q 002665 302 PIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTLIM------GNRDDIDEMSGTNAALLLS 373 (895)
Q Consensus 302 ~~~~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~--~l~liv------G~~~~~~~l~~~~~~~~~~ 373 (895)
....+++... .++++|+.++|++..||+..-+.||++++..++.+ +++++. +.+..+++++.+....+.+
T Consensus 264 ~~~~ei~~~~--~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~~~k~~v~~~v~r 341 (732)
T KOG1050|consen 264 SKGMEIKEPF--KGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVEELKFCVSVHVRR 341 (732)
T ss_pred HHHHHHhhhc--cCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchHHHHHHHHhHhhhhh
Confidence 1112222222 57899999999999999999999999998777665 343322 4455667888899999999
Q ss_pred HHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHc-----CCCEEEcCCCCcccccc
Q 002665 374 ILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAY-----GLPIVATKNGGPVDIHR 448 (895)
Q Consensus 374 i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~-----G~PVvat~~gg~~eiv~ 448 (895)
+++........+.+.+...++..++.++|..+ |+++++++++|||++++|+.+| |..|++..+|...-+
T Consensus 342 In~~f~~~~~~pV~~~~~~~~~~~l~a~~~Va----ev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl-- 415 (732)
T KOG1050|consen 342 INEKFGSASYQPVHSLLKDLPFLELLALYKVA----EVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTL-- 415 (732)
T ss_pred hhhccCCcccceEEEeeccCCHHHHhhhHHhh----hheeecccccccchhhhHHHHhhcccCCceEEeeeccccccc--
Confidence 99999999888888999999999999999999 9999999999999999999999 556666777775444
Q ss_pred cCCceEEeCCCCHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCC
Q 002665 449 VLDNGLLVDPHDQQSIADALLKLVS-DKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQRQPRWQRSDDGLDNSES 527 (895)
Q Consensus 449 ~~~~g~lv~p~d~~~la~ai~~ll~-~~~~~~~~~~~~~~~v~~~s~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 527 (895)
+..+++++|+|.++++.+|..+++ ..++++.+.....+.+..++...|+..+++.+.+.-.... ...
T Consensus 416 -~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~~~~~~~l~~~~~~~~-~~~---------- 483 (732)
T KOG1050|consen 416 -EDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWAKSFLQGLKRIWKVGF-LGF---------- 483 (732)
T ss_pred -cccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHHHHHHHhhhhhhhhcc-ccc----------
Confidence 356899999999999999999999 6667777777788887888999999999995554432211 000
Q ss_pred CCCCCCccccccccccccccccCCCCCCCCCCCCCcchhhhhccchhhhHHHHHHhhccccCCcccCcccccCCCCcccc
Q 002665 528 DSPGDSWRDIHDLSLNLKLSLEGDKNEGGSTLDNSLDTEENAVTGKNKLENAVLALSNRTIGGTQKADHNVASGKFPALR 607 (895)
Q Consensus 528 ~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 607 (895)
.... ....+.++..|++
T Consensus 484 ----------~~~~-------------------------------~l~~~~~i~~y~~---------------------- 500 (732)
T KOG1050|consen 484 ----------RVTP-------------------------------LLTAEHIVSDYKK---------------------- 500 (732)
T ss_pred ----------cccc-------------------------------ccChhHhhhhhhh----------------------
Confidence 0000 1234568888988
Q ss_pred cccEEEEEEecCCCChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHh-CCCCCCCCCEEEeCCCceEecC
Q 002665 608 RRKYVFVIAADCDTTSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVS-GGLSPLAFDAFICNSGSELYYP 686 (895)
Q Consensus 608 ~~~kli~~DiDGTL~~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~-l~l~~~~~d~~I~~nGa~I~~~ 686 (895)
+++|+|++|+|||+....+..+...++.|... ++..|.|+|||....+..++.. .++ +++++||..+..+
T Consensus 501 s~~rli~ldyd~t~~~~~~~~~~~~l~~L~~d---p~n~v~i~s~~~r~~l~~~~~~~~~l------gl~aEhG~f~r~~ 571 (732)
T KOG1050|consen 501 SKKRLILLDYDLTLIPPRSIKAISILKDLCSD---PKNIVYIVSGRGRSVLEKWFFGCKNL------GLAAEHGYFVRIP 571 (732)
T ss_pred ccceEEEecccccccCCCCchHHHHHHHHhcC---CCCeEEEEEccCchhhhhhccccccc------eeecccCceeccC
Confidence 89999999999999533333377777777776 6788999999999999777633 344 7999999999976
Q ss_pred CCCCCCCCCCCcccCcchhhhhccccCcchHHHHHHHHhhhccCCCCccCcccccccccccceEEEEEecCCCCC---cC
Q 002665 687 SSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMI---PP 763 (895)
Q Consensus 687 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~---~~ 763 (895)
+. |.... .+..|.... .+..+.+.+++++++.+.+ ...+.|++++++.. ..
T Consensus 572 ~~-----w~~~~-~~~~w~~~v-----~~i~~~~~ert~GS~ie~k---------------~~~l~~hy~~ad~~~g~~q 625 (732)
T KOG1050|consen 572 GK-----WETCV-LDLDWKDLV-----KDIFQYYTERTPGSYIERK---------------ETALVWHYRNADPEFGELQ 625 (732)
T ss_pred Cc-----eeeec-ccccHHHHH-----HHHHHHHHhcCCCceeccc---------------CceEEEeeeccCcchhHHH
Confidence 42 11111 344444333 2245566677888777755 34667777655322 12
Q ss_pred HHHHHHHHHhhcCeEEEEEeeCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcce------
Q 002665 764 VKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHK------ 837 (895)
Q Consensus 764 ~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~------ 837 (895)
.+++.++|......+.+. .+...+||.|.|+|||.|...+...+.-+++.+++ .||+.. | ++||+....
T Consensus 626 A~el~~~l~~~~~~~~v~--~g~~~Vev~~~gvsk~~~~~~~~~~~~~~~df~~c-~g~d~t-D-ed~~~~~~~~~~~~~ 700 (732)
T KOG1050|consen 626 AKELLEHLESKNEPVEVV--RGKHIVEVRPQGVSKGLAAERILSEMVKEPDFVLC-IGDDRT-D-EDMFEFISKAKDPEK 700 (732)
T ss_pred HHHHHHHhcccCCCeEEE--ecCceEEEcccccchHHHHHHHHHhcCCCcceEEE-ecCCCC-h-HHHHHHHhhccCCcc
Confidence 356667776522334433 33348999999999999999999999834455555 666554 8 999986532
Q ss_pred ---EEEEcCchhhhHhhhhcCCCCCCCccc
Q 002665 838 ---TVILKGVGESARKLHANRNYSLEDVIS 864 (895)
Q Consensus 838 ---gVaMgNA~~~~~~~~~~~~~~~~~~~~ 864 (895)
-++|.++. +++.+.|++++...
T Consensus 701 ~~~~F~~~~g~-----~~t~a~~~~~~~~~ 725 (732)
T KOG1050|consen 701 VEEIFACTVGQ-----KPSKAKYFLDDTHE 725 (732)
T ss_pred cceEEEEEcCC-----CCcccccccCChHH
Confidence 23443333 77777788777443
No 81
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.96 E-value=1e-28 Score=265.06 Aligned_cols=243 Identities=12% Similarity=0.075 Sum_probs=156.7
Q ss_pred cccEEEEEEecCCCC---hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCceEe
Q 002665 608 RRKYVFVIAADCDTT---SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELY 684 (895)
Q Consensus 608 ~~~kli~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~ 684 (895)
..+++||+||||||. +.+++.++++|++|+++| +.|+|||||++..+.++++++++. .+++||+||+.|+
T Consensus 5 ~~~~lI~~DlDGTLL~~~~~i~~~~~~ai~~l~~~G----i~~viaTGR~~~~i~~~~~~l~~~---~~~~I~~NGa~I~ 77 (271)
T PRK03669 5 QDPLLIFTDLDGTLLDSHTYDWQPAAPWLTRLREAQ----VPVILCSSKTAAEMLPLQQTLGLQ---GLPLIAENGAVIQ 77 (271)
T ss_pred CCCeEEEEeCccCCcCCCCcCcHHHHHHHHHHHHcC----CeEEEEcCCCHHHHHHHHHHhCCC---CCcEEEeCCCEEE
Confidence 578999999999994 457788999999999987 999999999999999999999982 2479999999999
Q ss_pred cCCCCCCCCCCCCcccCcchhhhhccccCcchHHHHHHHHh---hhccCCC-C-----------ccCcccccccccccce
Q 002665 685 YPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWA---ASVNDKK-G-----------EEGKIVEEDESRSTIH 749 (895)
Q Consensus 685 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~-----------~~~~~~~~~~~~~~~~ 749 (895)
......... .. ..+ ......+.+..+++... ....... . ................
T Consensus 78 ~~~~~~~~~---~~---~~~----~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (271)
T PRK03669 78 LDEQWQDHP---DF---PRI----ISGISHGEIRQVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASV 147 (271)
T ss_pred ecCcccCCC---Cc---eEe----ecCCCHHHHHHHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCc
Confidence 653110000 00 000 00011111111111100 0000000 0 0000000000000123
Q ss_pred EEEEEecCCCCCcCHHHHHHHHHhhcCeEEEEEeeCCeeEEeecCCCChHHHHHHHHHHhCC---CcccEEEEeCcCCCc
Q 002665 750 CYAFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGI---DLSNVVVIAGECGDT 826 (895)
Q Consensus 750 k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~lgi---~~~~viafgGD~nn~ 826 (895)
++.+. .++ ..+.++.+.+... .+.++. .+. ++||+|+|+|||+||++|++++|| +++++|| +||+.|
T Consensus 148 ~~~~~-~~~---~~~~~~~~~l~~~--~~~~~~-~~~-~iEi~~~g~sKg~al~~l~~~lgi~~~~~~~via-fGDs~N- 217 (271)
T PRK03669 148 TLIWR-DSD---ERMAQFTARLAEL--GLQFVQ-GAR-FWHVLDASAGKDQAANWLIATYQQLSGTRPTTLG-LGDGPN- 217 (271)
T ss_pred eeEec-CCH---HHHHHHHHHHHHC--CCEEEe-cCe-eEEEecCCCCHHHHHHHHHHHHHhhcCCCceEEE-EcCCHH-
Confidence 33332 111 2334566666542 355554 344 899999999999999999999999 9999999 677777
Q ss_pred cccccccCcceEEEEcCchhhhHhhhhcCCCCCCCcccCCCCceEEeccccChHHHHHHHHHhc
Q 002665 827 DYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLG 890 (895)
Q Consensus 827 D~~~Ml~~ag~gVaMgNA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~gI~~al~~~~ 890 (895)
| ++||+.+|+||||||+.+..+ -++.++..+.|+|...++|||.++|+||-
T Consensus 218 D-i~Ml~~ag~gvAM~~~~~~~~------------~l~~~~~~~~~~~~~~~~~g~~~~l~~~~ 268 (271)
T PRK03669 218 D-APLLDVMDYAVVVKGLNREGV------------HLQDDDPARVYRTQREGPEGWREGLDHFF 268 (271)
T ss_pred H-HHHHHhCCEEEEecCCCCCCc------------ccccccCCceEeccCCCcHHHHHHHHHHH
Confidence 7 999999999999999871101 01224567889999999999999999973
No 82
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.96 E-value=1.2e-28 Score=258.63 Aligned_cols=225 Identities=15% Similarity=0.102 Sum_probs=155.3
Q ss_pred cEEEEEEecCCCC---hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCceEecC
Q 002665 610 KYVFVIAADCDTT---SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYP 686 (895)
Q Consensus 610 ~kli~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~ 686 (895)
.|+|++|+||||. +.+++.++++|++++++| +.|+|||||++..+.++++.+++ ++++||+||+.|+..
T Consensus 3 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G----~~~~iaTGR~~~~~~~~~~~l~~----~~~~i~~nGa~i~~~ 74 (230)
T PRK01158 3 IKAIAIDIDGTITDKDRRLSLKAVEAIRKAEKLG----IPVILATGNVLCFARAAAKLIGT----SGPVIAENGGVISVG 74 (230)
T ss_pred eeEEEEecCCCcCCCCCccCHHHHHHHHHHHHCC----CEEEEEcCCchHHHHHHHHHhCC----CCcEEEecCeEEEEc
Confidence 5899999999993 458899999999999987 99999999999999999999998 357999999999874
Q ss_pred CCCCCCCCCCCcccCcchhhhhccccCcchHHHHHHHHhhhccCCCCccCcccccccccccceEEEEEecCCCCCcCHHH
Q 002665 687 SSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMIPPVKE 766 (895)
Q Consensus 687 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~ 766 (895)
.. + +.. +...+. ....++........... ..+..........++. ... . ...++
T Consensus 75 ~~----~---~~~----~~~~~~------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~-~---~~~~~ 128 (230)
T PRK01158 75 FD----G---KRI----FLGDIE------ECEKAYSELKKRFPEAS----TSLTKLDPDYRKTEVA-LRR-T---VPVEE 128 (230)
T ss_pred CC----C---CEE----EEcchH------HHHHHHHHHHHhccccc----eeeecCCcccccceee-ecc-c---ccHHH
Confidence 20 0 111 111111 11111111111110000 0000000000011121 111 1 12345
Q ss_pred HHHHHHhhcCeEEEEEeeCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEEcCchh
Q 002665 767 LRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGE 846 (895)
Q Consensus 767 l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaMgNA~~ 846 (895)
+.+.+...+..+.++.+ +. ++||+|+++|||.|+++|++++|++++++++ +||+.| | ++||+.+|+||||+||.
T Consensus 129 ~~~~l~~~~~~~~~~~~-~~-~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~-~GD~~N-D-i~m~~~ag~~vam~Na~- 202 (230)
T PRK01158 129 VRELLEELGLDLEIVDS-GF-AIHIKSPGVNKGTGLKKLAELMGIDPEEVAA-IGDSEN-D-LEMFEVAGFGVAVANAD- 202 (230)
T ss_pred HHHHHHHcCCcEEEEec-ce-EEEEeeCCCChHHHHHHHHHHhCCCHHHEEE-ECCchh-h-HHHHHhcCceEEecCcc-
Confidence 55566554444555444 34 8999999999999999999999999999999 777777 7 99999999999999999
Q ss_pred hhHhhhhcCCCCCCCcccCCCCceEEeccccChHHHHHHHHHhcc
Q 002665 847 SARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLGV 891 (895)
Q Consensus 847 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~gI~~al~~~~~ 891 (895)
+.+|..+.+||.++++|||+++|++|.|
T Consensus 203 -----------------~~vk~~a~~v~~~n~~~Gv~~~l~~~~~ 230 (230)
T PRK01158 203 -----------------EELKEAADYVTEKSYGEGVAEAIEHLLL 230 (230)
T ss_pred -----------------HHHHHhcceEecCCCcChHHHHHHHHhC
Confidence 5555556699999999999999999864
No 83
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.96 E-value=3.3e-29 Score=261.99 Aligned_cols=218 Identities=17% Similarity=0.163 Sum_probs=150.9
Q ss_pred EEEEecCCCC---hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCceEecCCCC
Q 002665 613 FVIAADCDTT---SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPSSS 689 (895)
Q Consensus 613 i~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~~~ 689 (895)
|++|+||||. ..+++.+++++++++++| +.|++||||++.++.++++.+++ ++++||+||+.|+..+..
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~G----i~~~~aTGR~~~~~~~~~~~l~~----~~~~i~~nGa~i~~~~~~ 72 (225)
T TIGR01482 1 IASDIDGTLTDPNRAINESALEAIRKAESVG----IPVVLVTGNSVQFARALAKLIGT----PDPVIAENGGEISYNEGM 72 (225)
T ss_pred CeEeccCccCCCCcccCHHHHHHHHHHHHCC----CEEEEEcCCchHHHHHHHHHhCC----CCeEEEecCcEEEeCCCC
Confidence 5899999994 458889999999999987 99999999999999999999987 468999999999975310
Q ss_pred CCCCCCCCcccCcchhhhhccccCcchHHHHHHHHhhhccCCCCccCcccccccccccceEEEEEecCCCCCcCHHHHHH
Q 002665 690 TEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMIPPVKELRK 769 (895)
Q Consensus 690 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~ 769 (895)
...|...+...|................ ..........++.+. .+ .+.+..
T Consensus 73 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~-~~------~~~~~~ 123 (225)
T TIGR01482 73 -----------DDIFLAYLEEEWFLDIVIAKTFPFSRLK-----------VQYPRRASLVKMRYG-ID------VDTVRE 123 (225)
T ss_pred -----------ceEEecccCHHHHHHHHHhcccchhhhc-----------cccccccceEEEeec-CC------HHHHHH
Confidence 0112222222221111110000000000 000011122233221 11 123333
Q ss_pred HHHhhcCeEEEEEeeCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEEcCchhhhH
Q 002665 770 LMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESAR 849 (895)
Q Consensus 770 ~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaMgNA~~~~~ 849 (895)
.+...+..+.+. +.+. ++||+|+++|||.||++|++++|++++++++ +||+.| | ++||+.+|+||||+||.
T Consensus 124 ~~~~~~~~~~~~-~~~~-~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~-~GD~~N-D-i~m~~~ag~~vam~Na~---- 194 (225)
T TIGR01482 124 IIKELGLNLVAV-DSGF-DIHILPQGVNKGVAVKKLKEKLGIKPGETLV-CGDSEN-D-IDLFEVPGFGVAVANAQ---- 194 (225)
T ss_pred HHHhcCceEEEe-cCCc-EEEEeeCCCCHHHHHHHHHHHhCCCHHHEEE-ECCCHh-h-HHHHHhcCceEEcCChh----
Confidence 444433334333 4555 8999999999999999999999999999999 777777 7 99999999999999999
Q ss_pred hhhhcCCCCCCCcccCCCCceEEeccccChHH----HHHHHHHhc
Q 002665 850 KLHANRNYSLEDVISFDSHNVIQVDEACDSYD----IRASLEKLG 890 (895)
Q Consensus 850 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~g----I~~al~~~~ 890 (895)
+.+|..+.+||.+.+++| |+++|++||
T Consensus 195 --------------~~~k~~A~~vt~~~~~~G~~~~v~~~l~~~~ 225 (225)
T TIGR01482 195 --------------PELKEWADYVTESPYGEGGAEAIGEILQAIG 225 (225)
T ss_pred --------------HHHHHhcCeecCCCCCCcHHHHHHHHHHhhC
Confidence 445555559999999999 999999987
No 84
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.96 E-value=1.2e-26 Score=262.11 Aligned_cols=364 Identities=15% Similarity=0.114 Sum_probs=231.4
Q ss_pred CCCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCC------ccccccccccchhhhcccCCCCCcEEEEecC
Q 002665 29 SDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYA------EPSEMLNRKNTENLMQGLGESSGAYIIRIPF 102 (895)
Q Consensus 29 ~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~------~~~e~~~~~~~~~~~~~~~~~~g~~i~r~~~ 102 (895)
|=--|+...-+-=|..|++.|+ ++|+++.+=....+....|+ .|.|+..=.+. -.-+.+....+..|..+|.
T Consensus 334 PWmTGtavnpL~rAayLa~~~~-~~VtlviPWl~~~dq~~vy~~~~~F~~p~eQe~~ir~-wl~~r~g~~~~~~i~fYpg 411 (794)
T PLN02501 334 PWMTGTAVNPLFRAAYLAKSAK-QNVTLLVPWLCKSDQELVYPNNLTFSSPEEQESYIRN-WLEERIGFKADFKISFYPG 411 (794)
T ss_pred cccccccccHHHHHHHhcccCC-ceEEEEEecCCccccccccCCCcccCCHHHHHHHHHH-HHHHhcCCCCCceEEeecc
Confidence 4444555555556788999966 89999975322111111222 22222110000 0012234445666665553
Q ss_pred CCCCcccc-ccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccC-CchHH--HHHHhccCCCCEEEEeC
Q 002665 103 GPKDKYVQ-KELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYA-DAGDA--AALLSGALNVPMVFTGH 178 (895)
Q Consensus 103 ~~~~~~l~-k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~-~~~~~--~~~~~~~~~ip~v~t~H 178 (895)
+|.. +..+.| +..+.+.+.. ..|||||.+.+ ..|+. +...+++++ |+|.++|
T Consensus 412 ----~~~~~~~SI~p-----~gdI~~~L~~--------------f~PDVVHLatP~~LGw~~~Glr~ArKl~-PVVasyH 467 (794)
T PLN02501 412 ----KFSKERRSIIP-----AGDTSQFIPS--------------KDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVH 467 (794)
T ss_pred ----hhccCCccccc-----hHHHHHHhhc--------------cCCCEEEECCchhhccHHHHHHHHHHcC-CeEEEEe
Confidence 2221 222222 1122222222 57999999987 46777 888999999 9999999
Q ss_pred CCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccc
Q 002665 179 SLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSC 258 (895)
Q Consensus 179 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~ 258 (895)
.-...+..+.. .|.+....+...+++.++ .+||.|+++|.... .+ ..
T Consensus 468 Tny~eYl~~y~-~g~L~~~llk~l~~~v~r--------~hcD~VIaPS~atq-~L----~~------------------- 514 (794)
T PLN02501 468 TNYLEYIKREK-NGALQAFFVKHINNWVTR--------AYCHKVLRLSAATQ-DL----PK------------------- 514 (794)
T ss_pred CCcHHHHhHhc-chhHHHHHHHHHHHHHHH--------hhCCEEEcCCHHHH-Hh----cc-------------------
Confidence 88776544332 122111001011111111 12899999996543 21 10
Q ss_pred cCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHH
Q 002665 259 HGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAF 338 (895)
Q Consensus 259 ~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~ 338 (895)
++....+|||++.|.|..... .....+.....+.++|+||+.+.||++.+|+|+
T Consensus 515 ------~vI~nVnGVDte~F~P~~r~~--------------------~~r~lgi~~~~kgiLfVGRLa~EKGld~LLeAl 568 (794)
T PLN02501 515 ------SVICNVHGVNPKFLKIGEKVA--------------------EERELGQQAFSKGAYFLGKMVWAKGYRELIDLL 568 (794)
T ss_pred ------cceeecccccccccCCcchhH--------------------HHHhcCCccccCceEEEEcccccCCHHHHHHHH
Confidence 222222699999998754211 112223333345689999999999999999999
Q ss_pred HhcccccCCCcEE-EEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCC
Q 002665 339 GECRPLRELANLT-LIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAF 417 (895)
Q Consensus 339 ~~l~~~~~~~~l~-livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~ 417 (895)
..+.... +++. +|+|+|+..+. +..++.++++ .+.|+|. .++...+|+.+ ||||+||.
T Consensus 569 a~L~~~~--pnvrLvIVGDGP~ree-----------Le~la~eLgL--~V~FLG~--~dd~~~lyasa----DVFVlPS~ 627 (794)
T PLN02501 569 AKHKNEL--DGFNLDVFGNGEDAHE-----------VQRAAKRLDL--NLNFLKG--RDHADDSLHGY----KVFINPSI 627 (794)
T ss_pred HHHHhhC--CCeEEEEEcCCccHHH-----------HHHHHHHcCC--EEEecCC--CCCHHHHHHhC----CEEEECCC
Confidence 9885433 4455 48899986443 4466777776 4889888 46677899999 99999999
Q ss_pred CCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHhhCHHHHHHHHHHHHHHHhhCCHHHH
Q 002665 418 IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEH 497 (895)
Q Consensus 418 ~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~v~~~s~~~~ 497 (895)
.|+||++++||||||+|||+++.||. +++.++.+|+++ .|+++++++|.++|+++..+..+.+ ...|||+..
T Consensus 628 sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll~--~D~EafAeAI~~LLsd~~~rl~~~a-----~~~~SWeAa 699 (794)
T PLN02501 628 SDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLTY--KTSEDFVAKVKEALANEPQPLTPEQ-----RYNLSWEAA 699 (794)
T ss_pred cccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEec--CCHHHHHHHHHHHHhCchhhhHHHH-----HhhCCHHHH
Confidence 99999999999999999999999985 446666778765 6999999999999997764433221 348999999
Q ss_pred HHHHHHHHH
Q 002665 498 CKSYLSRIS 506 (895)
Q Consensus 498 a~~~~~~l~ 506 (895)
++++++.-+
T Consensus 700 adrLle~~~ 708 (794)
T PLN02501 700 TQRFMEYSD 708 (794)
T ss_pred HHHHHHhhc
Confidence 999988753
No 85
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=99.96 E-value=2.7e-29 Score=271.16 Aligned_cols=244 Identities=34% Similarity=0.497 Sum_probs=170.5
Q ss_pred EEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCC-------C---cceEEEeeccccCCCCCCCCCcccccc
Q 002665 8 MKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMP-------G---VYRVDLLTRQVSAPDVDWTYAEPSEML 77 (895)
Q Consensus 8 ~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g-------~---~~~V~vit~~~~~~~~~~~~~~~~e~~ 77 (895)
+|+++|+||+++++|| +|| ||||||..||+++|++|.+.+ | .-+|.++|+.+.+.. .....++.|
T Consensus 274 ~vvliSpHG~f~q~nv-LG~-pDTGGQVvYVleqarALe~e~~~ri~~~gl~i~p~i~i~TRlIpd~~-~t~~~q~le-- 348 (550)
T PF00862_consen 274 NVVLISPHGYFGQENV-LGR-PDTGGQVVYVLEQARALENEMLYRIKLQGLDITPKIDIVTRLIPDAK-GTTCNQRLE-- 348 (550)
T ss_dssp EEEEE--SS--STTST-TSS-TTSSHHHHHHHHHHHHHHHHTHHHHHHTT-----EEEEEEE--TBTT-CGGGTSSEE--
T ss_pred EEEEEcCccccccccc-cCC-CCCCCcEEEEeHHHHHHHHHHHHHHHhcCCCCCCceeeecccccCCc-CCCcccccc--
Confidence 8999999999999999 999 999999999999999998642 1 126999999865432 123334443
Q ss_pred ccccchhhhcccCCCCCcEEEEecCCCCC----ccccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEe
Q 002665 78 NRKNTENLMQGLGESSGAYIIRIPFGPKD----KYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHG 153 (895)
Q Consensus 78 ~~~~~~~~~~~~~~~~g~~i~r~~~~~~~----~~l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~ 153 (895)
.+...++++|+|+|+++.+ +++.|+.+|||+.+|++.+...+..- + +.+||+||.
T Consensus 349 ----------~~~gt~~a~IlRvPF~~~~gi~~kwisrf~lWPyLe~fa~d~~~~i~~e---~--------~~~PdlI~G 407 (550)
T PF00862_consen 349 ----------KVSGTENARILRVPFGPEKGILRKWISRFDLWPYLEEFADDAEREILAE---L--------QGKPDLIIG 407 (550)
T ss_dssp ----------EETTESSEEEEEE-ESESTEEE-S---GGG-GGGHHHHHHHHHHHHHHH---H--------TS--SEEEE
T ss_pred ----------ccCCCCCcEEEEecCCCCcchhhhccchhhchhhHHHHHHHHHHHHHHH---h--------CCCCcEEEe
Confidence 3445578999999999863 58888999999999999877665431 1 246999999
Q ss_pred ccCCchHHHHHHhccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHH
Q 002665 154 HYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQ 233 (895)
Q Consensus 154 h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~ 233 (895)
||.+.+.+|.+++.++|+|..++.|+++..|+. .+.+.++.++..|++++++.+|..++..||.|||+|.++++.+
T Consensus 408 nYsDgnlvA~LLs~~lgv~~~~iaHsLek~Ky~----~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST~QEI~g~ 483 (550)
T PF00862_consen 408 NYSDGNLVASLLSRKLGVTQCFIAHSLEKTKYE----DSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITSTYQEIAGQ 483 (550)
T ss_dssp EHHHHHHHHHHHHHHHT-EEEEE-SS-HHHHHH----TTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESSHHHHHB-
T ss_pred ccCcchHHHHHHHhhcCCceehhhhcccccccc----ccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcchHhhcCC
Confidence 999999999999999999999999999998865 3666889999999999999999999999999999999999987
Q ss_pred HHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCC
Q 002665 234 WRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHN 282 (895)
Q Consensus 234 ~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~ 282 (895)
+..|+.|+....-.|.. ..|.|+..+.+.||+.++|+|+|.+.|.|-.
T Consensus 484 ~~~~gqyes~~~ftlpg-Lyrvv~Gi~vFdPkfNiv~PGad~~iyFpyt 531 (550)
T PF00862_consen 484 KDTVGQYESHKAFTLPG-LYRVVNGIDVFDPKFNIVSPGADESIYFPYT 531 (550)
T ss_dssp SSSBHTTGGGSSEEETT-TEEEEES--TT-TTEEE------TTTS--TT
T ss_pred ccccCCccchhhcchHh-HHhhhccccccCCcccccCCCCCcceecCCc
Confidence 66555544221000000 4577888888999999999999999888754
No 86
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.96 E-value=8.5e-27 Score=261.59 Aligned_cols=449 Identities=18% Similarity=0.199 Sum_probs=288.9
Q ss_pred eEEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCcccccccc-------
Q 002665 7 NMKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNR------- 79 (895)
Q Consensus 7 ~~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~------- 79 (895)
|||++++..-. .--++||..-.+..|.++|+++| ++|.|+.+.+. .+...+....+.+..
T Consensus 1 M~Il~v~~E~~---------p~vK~GGLaDv~~alpk~L~~~g--~~v~v~lP~y~--~~~~~~~~~~~~~~~~~~~~~~ 67 (487)
T COG0297 1 MKILFVASEIF---------PFVKTGGLADVVGALPKALAKRG--VDVRVLLPSYP--KVQKEWRDLLKVVGKFGVLKGG 67 (487)
T ss_pred Ccceeeeeeec---------CccccCcHHHHHHHhHHHHHhcC--CeEEEEcCCch--hhhhhhccccceeeEeeeeecc
Confidence 78888886554 22689999999999999999999 99999988643 222222221111000
Q ss_pred ccchhhhcccCCCCCcEEEEecCCCCCccccc--cccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCC
Q 002665 80 KNTENLMQGLGESSGAYIIRIPFGPKDKYVQK--ELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYAD 157 (895)
Q Consensus 80 ~~~~~~~~~~~~~~g~~i~r~~~~~~~~~l~k--~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~ 157 (895)
...--..+...+..++.+..+..+ .+..+ ...+.+-+.. .++..+.......+.. ... +..|||||+|.|.
T Consensus 68 ~~~~~~~~~~~~~~~v~~~lid~~---~~f~r~~~~~~~~~d~~-~Rf~~F~~a~~~~~~~-~~~--~~~pDIvH~hDWq 140 (487)
T COG0297 68 RAQLFIVKEYGKDGGVDLYLIDNP---ALFKRPDSTLYGYYDNA-ERFAFFSLAAAELAPL-GLI--SWLPDIVHAHDWQ 140 (487)
T ss_pred cceEEEEEeecccCCCcEEEecCh---hhcCccccccCCCCcHH-HHHHHHHHHHHHHhhh-cCC--CCCCCEEEeecHH
Confidence 000000001111112333333321 11221 1222332221 1111111111111111 010 1469999999999
Q ss_pred chHHHHHHhc----cCCCCEEEEeCCCchhhHHH---HHHhCCCChhhhhhHhh--HHHhHHHHHhhccccCEEEecCHH
Q 002665 158 AGDAAALLSG----ALNVPMVFTGHSLGRDKLEQ---LLKQGRLSRDEINTTYK--IMRRIEAEELSLDASEIVITSTRQ 228 (895)
Q Consensus 158 ~~~~~~~~~~----~~~ip~v~t~H~~~~~~~~~---~~~~g~~~~~~~~~~~~--~~~r~~~e~~~~~~ad~vi~~s~~ 228 (895)
++.++..++. ...+|.|+|+|++..+-... .-..|. ...... .+. +.-.+..++..+..||.|+++|+.
T Consensus 141 t~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgL-p~~~~~-~~~l~~~~~~~~lK~gi~~ad~vttVSpt 218 (487)
T COG0297 141 TGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGL-PFEAYA-SFGLEFYGQISFLKGGLYYADAVTTVSPT 218 (487)
T ss_pred HHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcC-CHHHhh-hceeeecCcchhhhhhheeccEEEEECHH
Confidence 9999999988 45799999999885443211 111111 110000 000 001123466788999999999999
Q ss_pred HHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCC-chhhhh
Q 002665 229 EIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDP-PIWSEI 307 (895)
Q Consensus 229 ~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 307 (895)
.+++++ +..+...++.+|+.+. .++.-|-||||.+.+.|....... ..+......... ......
T Consensus 219 Ya~Ei~--t~~~g~gl~g~l~~~~-----------~~l~GI~NgiD~~~wnp~~d~~~~--~~y~~~~~~~k~~nk~~L~ 283 (487)
T COG0297 219 YAGEIY--TPEYGEGLEGLLSWRS-----------GKLSGILNGIDYDLWNPETDPYIA--ANYSAEVLPAKAENKVALQ 283 (487)
T ss_pred HHHhhc--cccccccchhhhhhcc-----------ccEEEEEeeEEecccCcccccchh--ccCCccchhhhHHHHHHHH
Confidence 999886 4444444444444443 288999999999999887644221 111111111111 112223
Q ss_pred hhccCC--CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCC
Q 002665 308 MHFFSN--PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYG 385 (895)
Q Consensus 308 ~~~~~~--~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~ 385 (895)
.+++.+ .+.|++.++||+..+||++.+++++..+.+.. +++ +++|.++ ..+.+.+..+..++..
T Consensus 284 ~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~~-vilG~gd---------~~le~~~~~la~~~~~-- 349 (487)
T COG0297 284 ERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQL-VLLGTGD---------PELEEALRALASRHPG-- 349 (487)
T ss_pred HHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ceE-EEEecCc---------HHHHHHHHHHHHhcCc--
Confidence 344444 35699999999999999999999999997533 444 5778773 3456777777777755
Q ss_pred CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccc--------CCceEEeC
Q 002665 386 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRV--------LDNGLLVD 457 (895)
Q Consensus 386 ~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~--------~~~g~lv~ 457 (895)
++.+.-..+..-...+|..| |++++||++||+|++-++||.+|++.|+..+||.+|.|.+ ..+|+++.
T Consensus 350 ~~~~~i~~~~~la~~i~aga----D~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~ 425 (487)
T COG0297 350 RVLVVIGYDEPLAHLIYAGA----DVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFL 425 (487)
T ss_pred eEEEEeeecHHHHHHHHhcC----CEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEe
Confidence 56665565566677888888 9999999999999999999999999999999999998875 46899999
Q ss_pred CCCHHHHHHHHHHHhh---CHHH-HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhhhcC
Q 002665 458 PHDQQSIADALLKLVS---DKQL-WERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQRQ 512 (895)
Q Consensus 458 p~d~~~la~ai~~ll~---~~~~-~~~~~~~~~~~v~~~s~~~~a~~~~~~l~~~~~~~ 512 (895)
+.++++++.+|.+++. .++. |+.+..++.. ..|+|+..+.+|.+.|+.++...
T Consensus 426 ~~~~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~--~d~sw~~sa~~y~~lY~~~~~~~ 482 (487)
T COG0297 426 QTNPDHLANALRRALVLYRAPPLLWRKVQPNAMG--ADFSWDLSAKEYVELYKPLLSKP 482 (487)
T ss_pred cCCHHHHHHHHHHHHHHhhCCHHHHHHHHHhhcc--cccCchhHHHHHHHHHHHHhccc
Confidence 9999999999999986 4444 7777777666 68999999999999999998643
No 87
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.95 E-value=1.1e-26 Score=260.96 Aligned_cols=325 Identities=18% Similarity=0.221 Sum_probs=212.1
Q ss_pred CCCcEEEeccCCchHHHHHHh-ccCCCCEEEEeCCCchhhHHHHHHhCCC---------ChhhhhhHhhHHHhHHHHHhh
Q 002665 146 IWPVAIHGHYADAGDAAALLS-GALNVPMVFTGHSLGRDKLEQLLKQGRL---------SRDEINTTYKIMRRIEAEELS 215 (895)
Q Consensus 146 ~~pDvIh~h~~~~~~~~~~~~-~~~~ip~v~t~H~~~~~~~~~~~~~g~~---------~~~~~~~~~~~~~r~~~e~~~ 215 (895)
.++||+|+|.|.++.++..++ +..++|+|+|.|....-+. +..|.. ..+.......+..+...|+.+
T Consensus 147 ~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT~~GR~---l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~a 223 (590)
T cd03793 147 EPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHATLLGRY---LCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAA 223 (590)
T ss_pred CCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecccccccc---cccCCcccchhhhhcchhhhhhcccchHHHHHHHHH
Confidence 469999999999999999888 6688999999997643221 111210 000011112344555679999
Q ss_pred ccccCEEEecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCC
Q 002665 216 LDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGS 295 (895)
Q Consensus 216 ~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~ 295 (895)
...||.++++|+.+..+....|+.. | .+ |||||+|..+|.+..... ++.+
T Consensus 224 a~~Ad~fttVS~it~~E~~~Ll~~~-p----------------------d~-ViPNGid~~~f~~~~e~~-----~~~~- 273 (590)
T cd03793 224 AHCAHVFTTVSEITAYEAEHLLKRK-P----------------------DV-VLPNGLNVKKFSALHEFQ-----NLHA- 273 (590)
T ss_pred HhhCCEEEECChHHHHHHHHHhCCC-C----------------------CE-EeCCCcchhhcccchhhh-----hhhH-
Confidence 9999999999999999988877642 2 23 999999999997643111 0000
Q ss_pred CCCCCCchhh-----hhhhccCCCCCcEEEE-EeCCCC-CCCHHHHHHHHHhcccc----cCCCcEE-EE-EecC---CC
Q 002665 296 PASPDPPIWS-----EIMHFFSNPRKPMILA-LARPDP-KKNITTLVKAFGECRPL----RELANLT-LI-MGNR---DD 359 (895)
Q Consensus 296 ~~~~~~~~~~-----~~~~~~~~~~~~~Il~-vgrl~~-~Kgi~~ll~A~~~l~~~----~~~~~l~-li-vG~~---~~ 359 (895)
.....+.+ ...++..++++++++| +||+.+ .||++.+|+|+.++... ..+..++ ++ +... -.
T Consensus 274 --~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~ 351 (590)
T cd03793 274 --QSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFN 351 (590)
T ss_pred --HhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcC
Confidence 01111112 2333455678888888 799998 99999999999998542 1112232 32 2211 11
Q ss_pred chhhh---------hhhHHHHHH--------------------------------------------------------H
Q 002665 360 IDEMS---------GTNAALLLS--------------------------------------------------------I 374 (895)
Q Consensus 360 ~~~l~---------~~~~~~~~~--------------------------------------------------------i 374 (895)
.+.++ +..+++... +
T Consensus 352 ~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~i 431 (590)
T cd03793 352 VESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPI 431 (590)
T ss_pred HHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHH
Confidence 11121 111111111 1
Q ss_pred HHHHHHcCCCCC------EEe-CCCCCCC------cHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCC
Q 002665 375 LKLIDKYDLYGQ------VAY-PKHHKQS------DVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNG 441 (895)
Q Consensus 375 ~~~~~~~~l~~~------v~~-~g~~~~~------el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~g 441 (895)
...+.+.++.++ |.| +-+++.. +..++|+.| |++|+||++||||++++||||||+|||+|+.+
T Consensus 432 l~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~----dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~ 507 (590)
T cd03793 432 LNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGC----HLGVFPSYYEPWGYTPAECTVMGIPSITTNLS 507 (590)
T ss_pred HHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhc----eEEEeccccCCCCcHHHHHHHcCCCEEEccCc
Confidence 111222222211 222 2233322 478899999 99999999999999999999999999999999
Q ss_pred Cc----ccccccC-CceEEeC-------CCCHHHHHHHHHHHhhCHHHHHHHHHHHH--HHHhhCCHHHHHHHHHHHHHH
Q 002665 442 GP----VDIHRVL-DNGLLVD-------PHDQQSIADALLKLVSDKQLWERCRQNGL--KNIHQFSWPEHCKSYLSRISS 507 (895)
Q Consensus 442 g~----~eiv~~~-~~g~lv~-------p~d~~~la~ai~~ll~~~~~~~~~~~~~~--~~v~~~s~~~~a~~~~~~l~~ 507 (895)
|. .|++.++ ..|++|. +.++++++++|.++++. +.++++.++++ +..+.|+|++.+..|.+.+..
T Consensus 508 gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~ 586 (590)
T cd03793 508 GFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEFCQL-SRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQL 586 (590)
T ss_pred chhhhhHHHhccCCCceEEEecCCccchHHHHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 88 5665444 3578776 45678899999998854 45555555544 555799999999999999987
Q ss_pred hhh
Q 002665 508 CKQ 510 (895)
Q Consensus 508 ~~~ 510 (895)
.++
T Consensus 587 Al~ 589 (590)
T cd03793 587 ALS 589 (590)
T ss_pred Hhh
Confidence 654
No 88
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.95 E-value=5.9e-28 Score=260.22 Aligned_cols=247 Identities=14% Similarity=0.126 Sum_probs=152.4
Q ss_pred cEEEEEEecCCCC---hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCceEecC
Q 002665 610 KYVFVIAADCDTT---SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYP 686 (895)
Q Consensus 610 ~kli~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~ 686 (895)
.|+|++|+||||. +.+++.++++|++++++| +.|+|||||++.++.++++++++. .++||+||+.|+..
T Consensus 3 ~kli~~DlDGTLl~~~~~i~~~~~~ai~~~~~~G----~~~~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~i~d~ 74 (272)
T PRK10530 3 YRVIALDLDGTLLTPKKTILPESLEALARAREAG----YKVIIVTGRHHVAIHPFYQALALD----TPAICCNGTYLYDY 74 (272)
T ss_pred ccEEEEeCCCceECCCCccCHHHHHHHHHHHHCC----CEEEEEcCCChHHHHHHHHhcCCC----CCEEEcCCcEEEec
Confidence 6899999999993 568899999999999997 999999999999999999999883 36999999999963
Q ss_pred C-CCC--CCCCC-------CCcccCcchhh--hhcccc-CcchHHHHHH--HHhhhccCCCCccCcccccc----ccccc
Q 002665 687 S-SST--EDNHG-------LPFLVDLDYRF--HTEYRW-GGEGLRKTLV--RWAASVNDKKGEEGKIVEED----ESRST 747 (895)
Q Consensus 687 ~-~~~--~~~~~-------~~~~~d~~~~~--~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~ 747 (895)
. ... ..... ++...+..+.. .....| .......+.. .+..............+.+. .....
T Consensus 75 ~~~~~l~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (272)
T PRK10530 75 QAKKVLEADPLPVQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAARQVNA 154 (272)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHhhcCC
Confidence 2 110 00000 00000000000 000000 0000000000 00000000000000000000 00112
Q ss_pred ceEEEEEecCCCCCcCHHHHHHHHHhhcCeEEEEEeeCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEeCcCCCcc
Q 002665 748 IHCYAFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTD 827 (895)
Q Consensus 748 ~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~lgi~~~~viafgGD~nn~D 827 (895)
.+++... .++ ...++++.+.+.+. ..+.+..+... ++||+|+++|||.|++++++++|++++++++ +||+.| |
T Consensus 155 ~~~i~~~--~~~-~~~~~~~~~~~~~~-~~~~~~~s~~~-~~ei~~~~~~K~~~l~~l~~~~gi~~~e~i~-~GD~~N-D 227 (272)
T PRK10530 155 IWKFALT--HED-LPQLQHFAKHVEHE-LGLECEWSWHD-QVDIARKGNSKGKRLTQWVEAQGWSMKNVVA-FGDNFN-D 227 (272)
T ss_pred cEEEEEe--cCC-HHHHHHHHHHHhhh-cCceEEEecCc-eEEEecCCCChHHHHHHHHHHcCCCHHHeEE-eCCChh-h
Confidence 2333222 111 11223444444332 22445556555 8999999999999999999999999999999 677777 7
Q ss_pred ccccccCcceEEEEcCchhhhHhhhhcCCCCCCCcccCCCCceEEeccccChHHHHHHHHHhc
Q 002665 828 YEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLG 890 (895)
Q Consensus 828 ~~~Ml~~ag~gVaMgNA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~gI~~al~~~~ 890 (895)
++||+.+|+|||||||. +.+|..++++|.++++|||+++|++|-
T Consensus 228 -i~m~~~ag~~vamgna~------------------~~lk~~Ad~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 228 -ISMLEAAGLGVAMGNAD------------------DAVKARADLVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred -HHHHHhcCceEEecCch------------------HHHHHhCCEEEecCCCCcHHHHHHHHh
Confidence 99999999999999998 333334459999999999999999874
No 89
>PHA01630 putative group 1 glycosyl transferase
Probab=99.95 E-value=2.2e-26 Score=252.58 Aligned_cols=255 Identities=14% Similarity=0.104 Sum_probs=182.7
Q ss_pred eccCCchHHHHHHhccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhh-ccccCEEEecCHHHHH
Q 002665 153 GHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELS-LDASEIVITSTRQEIE 231 (895)
Q Consensus 153 ~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~-~~~ad~vi~~s~~~~~ 231 (895)
.|.....+.......+.|+|+|++.|+... +.+. .+... .+.+|.|+++|+...+
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~----------------------l~~~--~~~~~~~~~ad~ii~~S~~~~~ 107 (331)
T PHA01630 52 YYTIFNSMLFWKGIPHVGKNIVFEVADTDA----------------------ISHT--ALYFFRNQPVDEIVVPSQWSKN 107 (331)
T ss_pred ehhhhhHHHHHhhccccCCceEEEEEeech----------------------hhHH--HHHHHhhccCCEEEECCHHHHH
Confidence 444334444445555678999999998321 1111 23444 6789999999998877
Q ss_pred HHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhcc
Q 002665 232 EQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFF 311 (895)
Q Consensus 232 ~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (895)
.+...... .+ .++.+||||||.+.|.+....
T Consensus 108 ~l~~~g~~-~~---------------------~~i~vIpNGVd~~~f~~~~~~--------------------------- 138 (331)
T PHA01630 108 AFYTSGLK-IP---------------------QPIYVIPHNLNPRMFEYKPKE--------------------------- 138 (331)
T ss_pred HHHHcCCC-CC---------------------CCEEEECCCCCHHHcCCCccc---------------------------
Confidence 65432111 01 188999999999888543210
Q ss_pred CCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeC
Q 002665 312 SNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYP 390 (895)
Q Consensus 312 ~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~-livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~ 390 (895)
..+..+++++|++.+.||++.+++|+..+.+.. +++. +++|++.... ++ .++.+ +.
T Consensus 139 -~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~--~~~~llivG~~~~~~-----------~l------~~~~~---~~ 195 (331)
T PHA01630 139 -KPHPCVLAILPHSWDRKGGDIVVKIFHELQNEG--YDFYFLIKSSNMLDP-----------RL------FGLNG---VK 195 (331)
T ss_pred -cCCCEEEEEeccccccCCHHHHHHHHHHHHhhC--CCEEEEEEeCcccch-----------hh------ccccc---ee
Confidence 123456667778999999999999999986433 3444 4667543210 01 12222 34
Q ss_pred CCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCC------------
Q 002665 391 KHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDP------------ 458 (895)
Q Consensus 391 g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p------------ 458 (895)
+.++.+++..+|+.| |++|+||..|+||++++||||||+|||+|+.||..|++.++.+|+++++
T Consensus 196 ~~v~~~~l~~~y~~a----Dv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~ 271 (331)
T PHA01630 196 TPLPDDDIYSLFAGC----DILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPI 271 (331)
T ss_pred ccCCHHHHHHHHHhC----CEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCc
Confidence 567889999999999 9999999999999999999999999999999999999998877776642
Q ss_pred -------CCHHHHHHHHHHHhhCH--HHHH-HHHHHHHHHHhhCCHHHHHHHHHHHHHH
Q 002665 459 -------HDQQSIADALLKLVSDK--QLWE-RCRQNGLKNIHQFSWPEHCKSYLSRISS 507 (895)
Q Consensus 459 -------~d~~~la~ai~~ll~~~--~~~~-~~~~~~~~~v~~~s~~~~a~~~~~~l~~ 507 (895)
.|.+++++++.+++.++ ++++ .+.++++...++|||+.++++|+++|++
T Consensus 272 ~~G~~v~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 272 HVGYFLDPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred ccccccCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 37888999999999863 4444 4445545555899999999999999974
No 90
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.95 E-value=3.6e-27 Score=251.12 Aligned_cols=233 Identities=18% Similarity=0.082 Sum_probs=153.5
Q ss_pred EEEEEecCCCC--hh-hHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCceEecCCC
Q 002665 612 VFVIAADCDTT--SD-FLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPSS 688 (895)
Q Consensus 612 li~~DiDGTL~--~~-~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~~ 688 (895)
||++|+||||. .. ..+.+++++++|+++| +.|++||||++..+.++++++++ ++++||+||+.|+..+.
T Consensus 1 li~~DlDGTll~~~~~~~~~~~~~i~~l~~~g----~~~~~~TgR~~~~~~~~~~~~~~----~~~~I~~NGa~i~~~~~ 72 (256)
T TIGR01486 1 WIFTDLDGTLLDPHGYDWGPAKEVLERLQELG----IPVIPCTSKTAAEVEYLRKELGL----EDPFIVENGGAIYGPRG 72 (256)
T ss_pred CEEEcCCCCCcCCCCcCchHHHHHHHHHHHCC----CeEEEEcCCCHHHHHHHHHHcCC----CCcEEEcCCeEEEeCCC
Confidence 58999999993 22 4456899999999987 99999999999999999999998 36899999999997531
Q ss_pred CCCCCCCCCcccCcchhhhhccccCcchHHHHHHHHhhhc---cCCC-Cc---------c-CcccccccccccceEEEEE
Q 002665 689 STEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASV---NDKK-GE---------E-GKIVEEDESRSTIHCYAFE 754 (895)
Q Consensus 689 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~---------~-~~~~~~~~~~~~~~k~~~~ 754 (895)
.. . .+..| .....|..+.+..+++.+.... .... .. . ..............++.+.
T Consensus 73 ~~-------~-~~~~~--~~~~~i~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (256)
T TIGR01486 73 WF-------T-EPEYP--VIALGIPYEKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILW 142 (256)
T ss_pred cc-------c-CCCeE--EEEcCCCHHHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceec
Confidence 10 0 00001 1122233333333332211100 0000 00 0 0000000000112233222
Q ss_pred ecCCCCCcCHHHHHHHHHhhcCeEEEEEeeCCeeEEeecCCCChHHHHHHHHHHhCCC--cccEEEEeCcCCCccccccc
Q 002665 755 VTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGID--LSNVVVIAGECGDTDYEGLL 832 (895)
Q Consensus 755 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~lgi~--~~~viafgGD~nn~D~~~Ml 832 (895)
+++ .+..+.+.+...+ +.+..+ .. ++||+|+++|||.||++|++++|++ .+++++ +||+.| | ++||
T Consensus 143 --~~~---~~~~~~~~~~~~~--~~~~~s-~~-~~ei~~~~~~Kg~ai~~l~~~~~i~~~~~~~~a-~GD~~N-D-~~Ml 210 (256)
T TIGR01486 143 --SEE---RRERFTEALVELG--LEVTHG-NR-FYHVLGAGSDKGKAANALKQFYNQPGGAIKVVG-LGDSPN-D-LPLL 210 (256)
T ss_pred --ChH---HHHHHHHHHHHcC--CEEEeC-Cc-eEEEecCCCCHHHHHHHHHHHHhhcCCCceEEE-EcCCHh-h-HHHH
Confidence 222 2445556665432 455554 34 8999999999999999999999999 999999 777777 7 9999
Q ss_pred cCcceEEEEcCchhhhHhhhhcCCCCCCCcccCCCCc---eEEeccccChHHHHHHHHHh
Q 002665 833 GGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHN---VIQVDEACDSYDIRASLEKL 889 (895)
Q Consensus 833 ~~ag~gVaMgNA~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~t~~~~~~gI~~al~~~ 889 (895)
+.+|+||||+||... .+.+|.. ..+||.+.++|||+++|+||
T Consensus 211 ~~ag~~vam~Na~~~---------------~~~lk~~~~a~~~vt~~~~~dGva~~l~~~ 255 (256)
T TIGR01486 211 EVVDLAVVVPGPNGP---------------NVSLKPGDPGSFLLTPAPGPEGWREALEHL 255 (256)
T ss_pred HHCCEEEEeCCCCCC---------------ccccCccCCCcEEEcCCCCcHHHHHHHHHh
Confidence 999999999999810 1245554 35899999999999999986
No 91
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.95 E-value=7.9e-28 Score=255.96 Aligned_cols=222 Identities=18% Similarity=0.241 Sum_probs=152.6
Q ss_pred EEEEecCCC---ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCceEecCCCC
Q 002665 613 FVIAADCDT---TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPSSS 689 (895)
Q Consensus 613 i~~DiDGTL---~~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~~~ 689 (895)
||+|+|||| ...+++.++++++.|+++| +.|++||||++..+.++++++++ .+++||+||+.|+....
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~g----~~~~i~TGR~~~~~~~~~~~~~~----~~~~I~~nGa~i~~~~~- 71 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGKISPETIEALKELQEKG----IKLVIATGRSYSSIKRLLKELGI----DDYFICSNGALIDDPKG- 71 (254)
T ss_dssp EEEECCTTTCSTTSSSCHHHHHHHHHHHHTT----CEEEEECSSTHHHHHHHHHHTTH----CSEEEEGGGTEEEETTT-
T ss_pred cEEEECCceecCCCeeCHHHHHHHHhhcccc----eEEEEEccCcccccccccccccc----hhhhcccccceeeeccc-
Confidence 799999999 3568999999999999987 99999999999999999999998 36999999999943321
Q ss_pred CCCCCCCCcccCcchhhhhccccCcchHHHHHHHHhh----------------------------hccCCCCccCccccc
Q 002665 690 TEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAA----------------------------SVNDKKGEEGKIVEE 741 (895)
Q Consensus 690 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~ 741 (895)
+... ......+.+..++..... ...... .......
T Consensus 72 -------~~l~--------~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 134 (254)
T PF08282_consen 72 -------KILY--------EKPIDSDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFK--ESIVSED 134 (254)
T ss_dssp -------EEEE--------EESB-HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCE--EEESHHH
T ss_pred -------ccch--------hhheeccchhheeehhhhcccccccccceeeecccccccchhhhhhcccccc--ccccccc
Confidence 1110 000011111111110000 000000 0000000
Q ss_pred ccccccceEEEEEecCCCCCcCHHHHHHHHHhhc-CeEEEEEeeCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEe
Q 002665 742 DESRSTIHCYAFEVTNPQMIPPVKELRKLMRIQA-LRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIA 820 (895)
Q Consensus 742 ~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~lgi~~~~viafg 820 (895)
........|+.+.. +++ .++++.+.+.... ....+..+... ++||+|+++|||.|+++|++++|++++++++ +
T Consensus 135 ~~~~~~i~ki~~~~-~~~---~~~~l~~~l~~~~~~~~~~~~~~~~-~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~-~ 208 (254)
T PF08282_consen 135 DLEDEEIFKILFFP-DPE---DLEQLREELKKKFPNLIDVVRSSPY-FLEITPKGVSKGSAIKYLLEYLGISPEDIIA-F 208 (254)
T ss_dssp HHHCSSESEEEEES-CHH---HHHHHHHHHHHHHTTTEEEEEEETT-EEEEEETTSSHHHHHHHHHHHHTTSGGGEEE-E
T ss_pred ccccccceeeeccc-cch---hhhhhhhhhccccCcceeEEEeccc-ceEEeeCCCCHHHHHHHHhhhcccccceeEE-e
Confidence 11233456777442 222 3445555555543 33477778786 9999999999999999999999999999999 5
Q ss_pred CcCCCccccccccCcceEEEEcCchhhhHhhhhcCCCCCCCcccCCCCceEEeccccChHHHHHHH
Q 002665 821 GECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASL 886 (895)
Q Consensus 821 GD~nn~D~~~Ml~~ag~gVaMgNA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~gI~~al 886 (895)
||+.| | ++||+.+|+||||+||. .+++..++ ++|.++.+|||+++|
T Consensus 209 GD~~N-D-~~Ml~~~~~~~am~na~--~~~k~~a~----------------~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 209 GDSEN-D-IEMLELAGYSVAMGNAT--PELKKAAD----------------YITPSNNDDGVAKAI 254 (254)
T ss_dssp ESSGG-G-HHHHHHSSEEEEETTS---HHHHHHSS----------------EEESSGTCTHHHHHH
T ss_pred ecccc-c-HhHHhhcCeEEEEcCCC--HHHHHhCC----------------EEecCCCCChHHHhC
Confidence 56666 6 99999999999999999 44444444 999999999999986
No 92
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=99.95 E-value=8.2e-26 Score=250.05 Aligned_cols=330 Identities=15% Similarity=0.144 Sum_probs=253.5
Q ss_pred HHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHHhccC-CCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhH
Q 002665 127 THIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGAL-NVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKI 205 (895)
Q Consensus 127 ~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~~~~~-~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~ 205 (895)
+....++..+.+... .=|+|..|.+..-.++..+.++. ..++.|+.|-.++..- ++ +.
T Consensus 132 ~vN~~FAd~i~~~~~-----~gDiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiPfPssE--vf--------------r~ 190 (486)
T COG0380 132 KVNRKFADKIVEIYE-----PGDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPSSE--VF--------------RC 190 (486)
T ss_pred HHHHHHHHHHHHhcC-----CCCEEEEEechhhhhHHHHHHhCCCceEEEEEeCCCCCHH--HH--------------hh
Confidence 333444544444322 24999999886666666665543 4678899998766541 11 11
Q ss_pred HHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHHHHHhHhcccccc---CCCCCCeEEeCCCCcCCCcccCC
Q 002665 206 MRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCH---GRFMPRMVVIPPGIEFHHIVRHN 282 (895)
Q Consensus 206 ~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~---g~~~~~v~vip~Gid~~~f~~~~ 282 (895)
+-+.+.-...+-.||.|-..++..++.+.... .++++.....|+..- |+.. ++..+|.|||+..|....
T Consensus 191 lP~r~eIl~gll~~dligFqt~~y~~nF~~~~-------~r~~~~~~~~~~~~~~~~~~~v-~v~a~PIgID~~~~~~~~ 262 (486)
T COG0380 191 LPWREEILEGLLGADLIGFQTESYARNFLDLC-------SRLLGVTGDADIRFNGADGRIV-KVGAFPIGIDPEEFERAL 262 (486)
T ss_pred CchHHHHHHHhhcCCeeEecCHHHHHHHHHHH-------HHhccccccccccccccCCceE-EEEEEeeecCHHHHHHhh
Confidence 11111112356789999999998888765543 234433333444444 4545 899999999999887543
Q ss_pred CCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEEEE------
Q 002665 283 GDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTLIM------ 354 (895)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~--~l~liv------ 354 (895)
.+. .....+.++++.. ..++++|+.++|+|+.||+...+.||++|+..+|++ +++++.
T Consensus 263 ~~~-------------~v~~~~~el~~~~-~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr 328 (486)
T COG0380 263 KSP-------------SVQEKVLELKAEL-GRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSR 328 (486)
T ss_pred cCC-------------chhhHHHHHHHHh-cCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCc
Confidence 111 1212344444444 234899999999999999999999999998777776 344322
Q ss_pred ecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHc---
Q 002665 355 GNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAY--- 431 (895)
Q Consensus 355 G~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~--- 431 (895)
++.+.|+.++.+..+.+++||+.+++.+|.|..++...++++++.++|+.| |+++++|++||||||++||+||
T Consensus 329 ~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~a----Dv~lVtplrDGMNLvakEyVa~q~~ 404 (486)
T COG0380 329 EDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAA----DVMLVTPLRDGMNLVAKEYVAAQRD 404 (486)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhh----ceeeeccccccccHHHHHHHHhhcC
Confidence 445566678899999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred --CCCEEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Q 002665 432 --GLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVS-DKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISS 507 (895)
Q Consensus 432 --G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~-~~~~~~~~~~~~~~~v~~~s~~~~a~~~~~~l~~ 507 (895)
|+.|++..+|+..++ ..+++|||+|.++++++|.++|+ ++++++++.+.+++.+..+|...|+..|++.+..
T Consensus 405 ~~G~LiLSeFaGaa~~L----~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la~ 479 (486)
T COG0380 405 KPGVLILSEFAGAASEL----RDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSFLDDLAQ 479 (486)
T ss_pred CCCcEEEeccccchhhh----ccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 999999999999999 56999999999999999999999 8899999999999999999999999999999886
No 93
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=99.95 E-value=9.5e-27 Score=263.55 Aligned_cols=326 Identities=16% Similarity=0.145 Sum_probs=216.9
Q ss_pred HHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHHhcc-CCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHh
Q 002665 130 IQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGA-LNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRR 208 (895)
Q Consensus 130 ~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~~~~-~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r 208 (895)
..++..+.+... .-|+|..|.+....++..+.++ .+.++.+..|-.+|..- .+. . +....
T Consensus 129 ~~FA~~i~~~~~-----~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~e--~fr--~-----lP~r~----- 189 (474)
T PF00982_consen 129 RRFADAIAEVYR-----PGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIPFPSSE--IFR--C-----LPWRE----- 189 (474)
T ss_dssp HHHHHHHGGG-------TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S----HH--HHT--T-----STTHH-----
T ss_pred HHHHHHHHHhCc-----CCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecCCCCHH--HHh--h-----CCcHH-----
Confidence 344555555433 3789999988666666666554 46889999998776431 110 0 00111
Q ss_pred HHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHHHHHhH--hc-cccccCCCCCCeEEeCCCCcCCCcccCCCCC
Q 002665 209 IEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARI--KR-GVSCHGRFMPRMVVIPPGIEFHHIVRHNGDV 285 (895)
Q Consensus 209 ~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~--~~-gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~ 285 (895)
.-...+-.||.|-..+...++.+.... .++|+... .. +|...||.+ ++.++|.|||++.|......
T Consensus 190 --eiL~glL~aDlIgFqt~~~~~nFl~~~-------~r~lg~~~~~~~~~v~~~Gr~v-~v~~~pigId~~~~~~~~~~- 258 (474)
T PF00982_consen 190 --EILRGLLGADLIGFQTFEYARNFLSCC-------KRLLGLEVDSDRGTVEYNGRRV-RVGVFPIGIDPDAFAQLARS- 258 (474)
T ss_dssp --HHHHHHTTSSEEEESSHHHHHHHHHHH-------HHHS-EEEEETTE-EEETTEEE-EEEE------HHHHHHHHH--
T ss_pred --HHHHHhhcCCEEEEecHHHHHHHHHHH-------HHHcCCcccCCCceEEECCEEE-EEEEeeccCChHHHHhhccC-
Confidence 112357799999999999888775532 23443332 22 577788888 99999999999988642211
Q ss_pred CCcccccCCCCCCCCCchhhhhhhccCCCC-CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEEE---E---ec
Q 002665 286 DGEVERDEGSPASPDPPIWSEIMHFFSNPR-KPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTLI---M---GN 356 (895)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~--~l~li---v---G~ 356 (895)
.........++... .+ .++|+.++|+|+.||+...++||++|++.+|.+ +++|+ + .+
T Consensus 259 ------------~~v~~~~~~l~~~~--~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~~ 324 (474)
T PF00982_consen 259 ------------PEVQERAEELREKF--KGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSRED 324 (474)
T ss_dssp ------------S---HHHHHHHHHT--TT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-STT
T ss_pred ------------hHHHHHHHHHHHhc--CCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccCcc
Confidence 11222333343333 34 599999999999999999999999998888776 45543 2 33
Q ss_pred CCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHc-----
Q 002665 357 RDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAY----- 431 (895)
Q Consensus 357 ~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~----- 431 (895)
.+.|++++.+..+.+++||+.+++.+|.|.+++.+.++++++.++|+.| ||+++||++|||||+++||++|
T Consensus 325 ~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~a----Dv~lvTslrDGmNLva~Eyva~q~~~~ 400 (474)
T PF00982_consen 325 VPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAA----DVALVTSLRDGMNLVAKEYVACQDDNP 400 (474)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-----SEEEE--SSBS--HHHHHHHHHS-TS-
T ss_pred chhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhh----hhEEecchhhccCCcceEEEEEecCCC
Confidence 4457789999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred CCCEEEcCCCCcccccccCC-ceEEeCCCCHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Q 002665 432 GLPIVATKNGGPVDIHRVLD-NGLLVDPHDQQSIADALLKLVS-DKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISS 507 (895)
Q Consensus 432 G~PVvat~~gg~~eiv~~~~-~g~lv~p~d~~~la~ai~~ll~-~~~~~~~~~~~~~~~v~~~s~~~~a~~~~~~l~~ 507 (895)
|+.|+|+.+|+..++ . .+++|||+|++++|++|.++|+ ++++++.+.+..++.+..+|...|++.|++.+++
T Consensus 401 GvLiLSefaGaa~~L----~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 401 GVLILSEFAGAAEQL----SEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLRDLKR 474 (474)
T ss_dssp -EEEEETTBGGGGT-----TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHHT
T ss_pred CceEeeccCCHHHHc----CCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHHHhhC
Confidence 888999999998887 4 4599999999999999999999 8889999999999999999999999999998863
No 94
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.94 E-value=1e-25 Score=254.38 Aligned_cols=274 Identities=23% Similarity=0.293 Sum_probs=209.5
Q ss_pred CCCcEEEeccCCchHHHHHHhccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEec
Q 002665 146 IWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITS 225 (895)
Q Consensus 146 ~~pDvIh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~ 225 (895)
.++|+|+++....... ..+......+.++++|+......... ....+.. +.++ ....+..+|.+++.
T Consensus 98 ~~~diii~~~~~~~~~-~~~~~~~~~~~i~~~h~~~~~~~~~~------~~~~~~~---~~~~---~~~~~~~~d~ii~~ 164 (372)
T cd04949 98 TKPDVFILDRPTLDGQ-ALLNMKKAAKVVVVLHSNHVSDNNDP------VHSLINN---FYEY---VFENLDKVDGVIVA 164 (372)
T ss_pred CCCCEEEECCccccch-hHHhccCCceEEEEEChHHhCCcccc------cccccch---hhHH---HHhChhhCCEEEEc
Confidence 3599999987644333 23333446678899997532211000 0000111 1111 12246789999999
Q ss_pred CHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhh
Q 002665 226 TRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWS 305 (895)
Q Consensus 226 s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (895)
|+...+.+...++.. .++.+||+|++...+.+...
T Consensus 165 s~~~~~~l~~~~~~~-----------------------~~v~~ip~g~~~~~~~~~~~---------------------- 199 (372)
T cd04949 165 TEQQKQDLQKQFGNY-----------------------NPIYTIPVGSIDPLKLPAQF---------------------- 199 (372)
T ss_pred cHHHHHHHHHHhCCC-----------------------CceEEEcccccChhhcccch----------------------
Confidence 998887776655431 15899999999887654210
Q ss_pred hhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCC
Q 002665 306 EIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYG 385 (895)
Q Consensus 306 ~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~ 385 (895)
....++.|+++||+.+.||++.+++|+..+.+..+...+ +++|.++.. ..+...+.++++.+
T Consensus 200 ------~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l-~i~G~g~~~-----------~~~~~~~~~~~~~~ 261 (372)
T cd04949 200 ------KQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATL-DIYGYGDEE-----------EKLKELIEELGLED 261 (372)
T ss_pred ------hhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEE-EEEEeCchH-----------HHHHHHHHHcCCcc
Confidence 123567899999999999999999999999754554444 367776643 23445667888889
Q ss_pred CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCC-CcccccccCCceEEeCCCCHHHH
Q 002665 386 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNG-GPVDIHRVLDNGLLVDPHDQQSI 464 (895)
Q Consensus 386 ~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~g-g~~eiv~~~~~g~lv~p~d~~~l 464 (895)
+|.|.|+ .+++..+|+.| |++|+||..||||++++|||+||+|||+++.+ |..+++.++.+|+++++.|++++
T Consensus 262 ~v~~~g~--~~~~~~~~~~a----d~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~l 335 (372)
T cd04949 262 YVFLKGY--TRDLDEVYQKA----QLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVPKGDIEAL 335 (372)
T ss_pred eEEEcCC--CCCHHHHHhhh----hEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeCCCcHHHH
Confidence 9999995 57899999999 99999999999999999999999999999987 88999999999999999999999
Q ss_pred HHHHHHHhhCHHHHHHHHHHHHHHHhhCCHHHHHHHH
Q 002665 465 ADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSY 501 (895)
Q Consensus 465 a~ai~~ll~~~~~~~~~~~~~~~~v~~~s~~~~a~~~ 501 (895)
+++|.+++++++.++++++++++..++|||+.++++|
T Consensus 336 a~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~w 372 (372)
T cd04949 336 AEAIIELLNDPKLLQKFSEAAYENAERYSEENVWEKW 372 (372)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence 9999999999999999999999998899999998764
No 95
>PHA01633 putative glycosyl transferase group 1
Probab=99.94 E-value=3.7e-25 Score=239.56 Aligned_cols=221 Identities=14% Similarity=0.195 Sum_probs=164.1
Q ss_pred ccccCEEEecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCC
Q 002665 216 LDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGS 295 (895)
Q Consensus 216 ~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~ 295 (895)
+.+.+.+|++|+...+.+.+. |+.. .+ +||+|+|++.|.+.....
T Consensus 90 m~~~~~vIavS~~t~~~L~~~------------------G~~~------~i-~I~~GVD~~~f~p~~~~~---------- 134 (335)
T PHA01633 90 LLQDVKFIPNSKFSAENLQEV------------------GLQV------DL-PVFHGINFKIVENAEKLV---------- 134 (335)
T ss_pred HhcCCEEEeCCHHHHHHHHHh------------------CCCC------ce-eeeCCCChhhcCccchhh----------
Confidence 455668899999877765432 2211 33 478999999887633110
Q ss_pred CCCCCCchhhhhhhccC-CCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEE-EEecCCCchhhhhhhHHHH
Q 002665 296 PASPDPPIWSEIMHFFS-NPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRDDIDEMSGTNAALL 371 (895)
Q Consensus 296 ~~~~~~~~~~~~~~~~~-~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~--~l~l-ivG~~~~~~~l~~~~~~~~ 371 (895)
+ ..+.++.. .++.++|+++||+.++||++.+++|+.++.+..+.+ ++.+ ++|.
T Consensus 135 -----~---~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~--------------- 191 (335)
T PHA01633 135 -----P---QLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH--------------- 191 (335)
T ss_pred -----H---HHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH---------------
Confidence 0 11111211 146789999999999999999999999987544443 3444 4442
Q ss_pred HHHHHHHHHcCCCCCEEeC---CCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccc
Q 002665 372 LSILKLIDKYDLYGQVAYP---KHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHR 448 (895)
Q Consensus 372 ~~i~~~~~~~~l~~~v~~~---g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~ 448 (895)
..+.++++.++|.|. |.++.+++.++|+.| |+||+||..||||++++||||||+|||+++.|+..|++.
T Consensus 192 ----~~~~~l~l~~~V~f~g~~G~~~~~dl~~~y~~a----DifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g 263 (335)
T PHA01633 192 ----KQFTQLEVPANVHFVAEFGHNSREYIFAFYGAM----DFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTS 263 (335)
T ss_pred ----HHHHHcCCCCcEEEEecCCCCCHHHHHHHHHhC----CEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecC
Confidence 123456777889998 555778999999999 999999999999999999999999999999999888643
Q ss_pred c------------------CCceEEeCCCCHHHHHHHHHHHhhCHHHHHHHHHHHHHHHhhCCHHHHHHHHHH
Q 002665 449 V------------------LDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLS 503 (895)
Q Consensus 449 ~------------------~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~v~~~s~~~~a~~~~~ 503 (895)
+ ...|+++++.|+++++++|.+++...+ +..++.++++.+++|+|+.++++|++
T Consensus 264 ~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~-~~~~~~~~~~~a~~f~~~~~~~~~~~ 335 (335)
T PHA01633 264 WQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQD-REERSMKLKELAKKYDIRNLYTRFLE 335 (335)
T ss_pred CccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccC-hhhhhHHHHHHHHhcCHHHHHHHhhC
Confidence 1 224678888999999999999966321 33347788888899999999999863
No 96
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.94 E-value=1.1e-26 Score=247.67 Aligned_cols=233 Identities=15% Similarity=0.131 Sum_probs=149.8
Q ss_pred EEEEEecCCCC---hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCceEecCCC
Q 002665 612 VFVIAADCDTT---SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPSS 688 (895)
Q Consensus 612 li~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~~ 688 (895)
||++||||||. +.+++.+.+++++++++| +.|+|||||++..+.++++++++. .++||+||+.|++.+.
T Consensus 1 li~~DlDGTLl~~~~~i~~~~~~~i~~l~~~G----~~~~iaTGR~~~~~~~~~~~~~~~----~~~I~~NGa~i~~~~~ 72 (256)
T TIGR00099 1 LIFIDLDGTLLNDDHTISPSTKEALAKLREKG----IKVVLATGRPYKEVKNILKELGLD----TPFITANGAAVIDDQG 72 (256)
T ss_pred CEEEeCCCCCCCCCCccCHHHHHHHHHHHHCC----CeEEEEeCCCHHHHHHHHHHcCCC----CCEEEcCCcEEECCCC
Confidence 58999999993 568899999999999987 999999999999999999999883 3799999999997531
Q ss_pred CCCCCCCCCcccCcchhhhh-------------c--ccc-CcchHHHHHHHHhhhccCCCCccCccccc--ccccccceE
Q 002665 689 STEDNHGLPFLVDLDYRFHT-------------E--YRW-GGEGLRKTLVRWAASVNDKKGEEGKIVEE--DESRSTIHC 750 (895)
Q Consensus 689 ~~~~~~~~~~~~d~~~~~~~-------------~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~k 750 (895)
.. . .....+......+ . ..+ ........+........... ..+.. ........+
T Consensus 73 ~~--i--~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 144 (256)
T TIGR00099 73 EI--L--YKKPLDLDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPK----LEVVDIQYLPDDILKI 144 (256)
T ss_pred CE--E--eecCCCHHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCc----ceeccchhhhcccceE
Confidence 10 0 0000000000000 0 000 00000000000000000000 00000 000111223
Q ss_pred EEEEecCCCCCcCHHHHHHHHHh--hcCeEEEEEeeCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEeCcCCCccc
Q 002665 751 YAFEVTNPQMIPPVKELRKLMRI--QALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDY 828 (895)
Q Consensus 751 ~~~~~~~~~~~~~~~~l~~~l~~--~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~ 828 (895)
+.+. .++. ..+++.+.+.. ....+.+..+.+. ++||+|+++|||.||+++++++|++++++++ +||+.| |
T Consensus 145 ~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~s~~~-~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~-~GD~~n-D- 216 (256)
T TIGR00099 145 LLLF-LDPE---DLDLLIEALNKLELEENVSVVSSGPY-SIEITAKGVSKGSALQSLAEALGISLEDVIA-FGDGMN-D- 216 (256)
T ss_pred EEEE-CCHH---HHHHHHHHhhhhhhcCCEEEEEecCc-eEEecCCCCChHHHHHHHHHHcCCCHHHEEE-eCCcHH-h-
Confidence 3332 2222 23455555542 2345777778776 9999999999999999999999999999999 667677 7
Q ss_pred cccccCcceEEEEcCchhhhHhhhhcCCCCCCCcccCCCCceEEeccccChHHHHHHH
Q 002665 829 EGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASL 886 (895)
Q Consensus 829 ~~Ml~~ag~gVaMgNA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~gI~~al 886 (895)
++||+.+|++|||+||. +.++..+.++|.++++|||+++|
T Consensus 217 ~~m~~~~~~~~a~~na~------------------~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 217 IEMLEAAGYGVAMGNAD------------------EELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred HHHHHhCCceeEecCch------------------HHHHHhCCEEecCCCCcchhhhC
Confidence 99999999999999998 33344444999999999999875
No 97
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.94 E-value=7.4e-25 Score=245.89 Aligned_cols=335 Identities=18% Similarity=0.143 Sum_probs=233.8
Q ss_pred CCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhhcccCCCCCcEEEEecCCCCCcccc
Q 002665 31 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQ 110 (895)
Q Consensus 31 ~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~g~~i~r~~~~~~~~~l~ 110 (895)
+||.++...+|+++|.+.| |+|+++|.... + ..+.+ ...|+++++++.......
T Consensus 11 ~gG~~~~~~~la~~L~~~g--~ev~vv~~~~~-~--------~~~~~-------------~~~g~~~~~~~~~~~~~~-- 64 (357)
T PRK00726 11 TGGHVFPALALAEELKKRG--WEVLYLGTARG-M--------EARLV-------------PKAGIEFHFIPSGGLRRK-- 64 (357)
T ss_pred chHhhhHHHHHHHHHHhCC--CEEEEEECCCc-h--------hhhcc-------------ccCCCcEEEEeccCcCCC--
Confidence 6899999999999999999 99999987421 0 00000 113888888886432100
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHHhccCCCCEEEEeCCCchhhHHHHHH
Q 002665 111 KELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLK 190 (895)
Q Consensus 111 k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~ 190 (895)
..+..+.. ...++..+.++.+.+++ .+|||||+|.+.+++.+..+++..++|+|++.|+.++..
T Consensus 65 --~~~~~l~~-~~~~~~~~~~~~~~ik~-------~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~~~------ 128 (357)
T PRK00726 65 --GSLANLKA-PFKLLKGVLQARKILKR-------FKPDVVVGFGGYVSGPGGLAARLLGIPLVIHEQNAVPGL------ 128 (357)
T ss_pred --ChHHHHHH-HHHHHHHHHHHHHHHHh-------cCCCEEEECCCcchhHHHHHHHHcCCCEEEEcCCCCccH------
Confidence 00000001 11123333334444443 579999999876677777778888999999877642210
Q ss_pred hCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeC
Q 002665 191 QGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIP 270 (895)
Q Consensus 191 ~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip 270 (895)
.++..++.+|.+++.+++.. .. ..+ .++.++|
T Consensus 129 --------------------~~r~~~~~~d~ii~~~~~~~---~~----~~~---------------------~~i~vi~ 160 (357)
T PRK00726 129 --------------------ANKLLARFAKKVATAFPGAF---PE----FFK---------------------PKAVVTG 160 (357)
T ss_pred --------------------HHHHHHHHhchheECchhhh---hc----cCC---------------------CCEEEEC
Confidence 12224667899999887432 11 112 2899999
Q ss_pred CCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCCCCCCCHHHHH-HHHHhcccccCCCc
Q 002665 271 PGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLV-KAFGECRPLRELAN 349 (895)
Q Consensus 271 ~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll-~A~~~l~~~~~~~~ 349 (895)
||+|.+.+.+... ..++...++.++|+++|+....|++..++ +|+.++.. .+.
T Consensus 161 n~v~~~~~~~~~~-----------------------~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~~~~---~~~ 214 (357)
T PRK00726 161 NPVREEILALAAP-----------------------PARLAGREGKPTLLVVGGSQGARVLNEAVPEALALLPE---ALQ 214 (357)
T ss_pred CCCChHhhcccch-----------------------hhhccCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhhh---CcE
Confidence 9999876543110 01122345678899999988888876666 99988743 133
Q ss_pred EEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHH
Q 002665 350 LTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAA 429 (895)
Q Consensus 350 l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~ 429 (895)
..+++|+++. ..+....+ +++. |.+.|++ +++..+|..| |+++.++ .+.+++|||
T Consensus 215 ~~~~~G~g~~------------~~~~~~~~-~~~~--v~~~g~~--~~~~~~~~~~----d~~i~~~----g~~~~~Ea~ 269 (357)
T PRK00726 215 VIHQTGKGDL------------EEVRAAYA-AGIN--AEVVPFI--DDMAAAYAAA----DLVICRA----GASTVAELA 269 (357)
T ss_pred EEEEcCCCcH------------HHHHHHhh-cCCc--EEEeehH--hhHHHHHHhC----CEEEECC----CHHHHHHHH
Confidence 3346787752 22333344 5553 8999996 7999999999 9999865 268999999
Q ss_pred HcCCCEEEcCCCC--------cccccccCCceEEeCCCC--HHHHHHHHHHHhhCHHHHHHHHHHHHHHHhhCCHHHHHH
Q 002665 430 AYGLPIVATKNGG--------PVDIHRVLDNGLLVDPHD--QQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCK 499 (895)
Q Consensus 430 a~G~PVvat~~gg--------~~eiv~~~~~g~lv~p~d--~~~la~ai~~ll~~~~~~~~~~~~~~~~v~~~s~~~~a~ 499 (895)
++|+|+|++..++ ..+.+.+.+.|+++++.| +++++++|.+++++++.++++++++++..+.++.+.+++
T Consensus 270 ~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (357)
T PRK00726 270 AAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSDPERLEAMAEAARALGKPDAAERLAD 349 (357)
T ss_pred HhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcCHHHHHHHHHHHHhcCCcCHHHHHHH
Confidence 9999999987643 235676778899998888 999999999999999999999999999989999999999
Q ss_pred HHHHHHH
Q 002665 500 SYLSRIS 506 (895)
Q Consensus 500 ~~~~~l~ 506 (895)
.+++.++
T Consensus 350 ~~~~~~~ 356 (357)
T PRK00726 350 LIEELAR 356 (357)
T ss_pred HHHHHhh
Confidence 9988765
No 98
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.94 E-value=2.4e-26 Score=238.25 Aligned_cols=212 Identities=17% Similarity=0.145 Sum_probs=147.3
Q ss_pred cEEEEEEecCCCC---hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCceEecC
Q 002665 610 KYVFVIAADCDTT---SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYP 686 (895)
Q Consensus 610 ~kli~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~ 686 (895)
.|+|++|+||||. +.+++.+.+++++|+++| +.|++||||++..+.++++.+++. .++||+||+.|++.
T Consensus 1 ik~v~~DlDGTLl~~~~~i~~~~~~~i~~l~~~g----~~~~~~TGR~~~~~~~~~~~l~~~----~~~i~~NGa~i~~~ 72 (215)
T TIGR01487 1 IKLVAIDIDGTLTEPNRMISERAIEAIRKAEKKG----IPVSLVTGNTVPFARALAVLIGTS----GPVVAENGGVIFYN 72 (215)
T ss_pred CcEEEEecCCCcCCCCcccCHHHHHHHHHHHHCC----CEEEEEcCCcchhHHHHHHHhCCC----CcEEEccCcEEEeC
Confidence 3799999999993 568899999999999987 999999999999999999999872 47999999999975
Q ss_pred CCCCCCCCCCCcccCcchhhhhccccCcchHHHHHHHHhhhccCCCCccCcccccccccccceEEEEEecCCCCCcCHHH
Q 002665 687 SSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMIPPVKE 766 (895)
Q Consensus 687 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~ 766 (895)
+. .. .+.. ....|........ ..+..... ......+..+.. ... ..+.
T Consensus 73 ~~--------~~----~~~~-~~~~~~~~~~~~~--~~~~~~~~-------------~~~~~~~~~~~~-~~~---~~~~ 120 (215)
T TIGR01487 73 KE--------DI----FLAN-MEEEWFLDEEKKK--RFPRDRLS-------------NEYPRASLVIMR-EGK---DVDE 120 (215)
T ss_pred CC--------cE----EEec-ccchhhHHHhhhh--hhhhhhcc-------------cccceeEEEEec-CCc---cHHH
Confidence 31 00 0000 0000100000000 00000000 000011222222 121 2345
Q ss_pred HHHHHHhhcCeEEEEEeeCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEEcCchh
Q 002665 767 LRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGE 846 (895)
Q Consensus 767 l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaMgNA~~ 846 (895)
+.+.+... .+.+..+ +. ++||+|.+++||+|++++++++|++.+++++ +||+.| | ++||+.+|+||||+||.
T Consensus 121 ~~~~l~~~--~~~~~~~-~~-~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~-iGDs~N-D-~~ml~~ag~~vam~na~- 192 (215)
T TIGR01487 121 VREIIKER--GLNLVDS-GF-AIHIMKKGVDKGVGVEKLKELLGIKPEEVAA-IGDSEN-D-IDLFRVVGFKVAVANAD- 192 (215)
T ss_pred HHHHHHhC--CeEEEec-Cc-eEEEecCCCChHHHHHHHHHHhCCCHHHEEE-ECCCHH-H-HHHHHhCCCeEEcCCcc-
Confidence 55566543 3455444 44 8999999999999999999999999999999 777777 7 99999999999999999
Q ss_pred hhHhhhhcCCCCCCCcccCCCCceEEeccccChHHHHHHH
Q 002665 847 SARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASL 886 (895)
Q Consensus 847 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~gI~~al 886 (895)
+.++..+.++|.+.++|||+++|
T Consensus 193 -----------------~~~k~~A~~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 193 -----------------DQLKEIADYVTSNPYGEGVVEVL 215 (215)
T ss_pred -----------------HHHHHhCCEEcCCCCCchhhhhC
Confidence 44444455999999999999875
No 99
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.93 E-value=8.4e-24 Score=236.71 Aligned_cols=330 Identities=18% Similarity=0.187 Sum_probs=227.5
Q ss_pred CCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhhcccCCCCCcEEEEecCCCCCcccc
Q 002665 31 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQ 110 (895)
Q Consensus 31 ~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~g~~i~r~~~~~~~~~l~ 110 (895)
+||+.+++.+|+++|.++| |+|+++|.... ...+.. ...++++++++.....
T Consensus 9 ~gG~~~~~~~la~~l~~~G--~ev~v~~~~~~---------~~~~~~-------------~~~~~~~~~~~~~~~~---- 60 (350)
T cd03785 9 TGGHIFPALALAEELRERG--AEVLFLGTKRG---------LEARLV-------------PKAGIPLHTIPVGGLR---- 60 (350)
T ss_pred chhhhhHHHHHHHHHHhCC--CEEEEEECCCc---------chhhcc-------------cccCCceEEEEecCcC----
Confidence 7999999999999999999 99999988521 000000 1137888888874321
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHHhccCCCCEEEEeCCCchhhHHHHHH
Q 002665 111 KELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLK 190 (895)
Q Consensus 111 k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~ 190 (895)
+...+..+..+ ..++..+..+.+.+++ ++||+||+|...++..+...++..++|++++.|+.++.
T Consensus 61 ~~~~~~~~~~~-~~~~~~~~~~~~~i~~-------~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~~~------- 125 (350)
T cd03785 61 RKGSLKKLKAP-FKLLKGVLQARKILKK-------FKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAVPG------- 125 (350)
T ss_pred CCChHHHHHHH-HHHHHHHHHHHHHHHh-------cCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCCcc-------
Confidence 11111111111 1112333333333333 67999999987667777778888899999877754221
Q ss_pred hCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeC
Q 002665 191 QGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIP 270 (895)
Q Consensus 191 ~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip 270 (895)
.. ++..++.+|.|++.|+...+. + .+. ++.++|
T Consensus 126 --------------~~-----~~~~~~~~~~vi~~s~~~~~~----~---~~~---------------------~~~~i~ 158 (350)
T cd03785 126 --------------LA-----NRLLARFADRVALSFPETAKY----F---PKD---------------------KAVVTG 158 (350)
T ss_pred --------------HH-----HHHHHHhhCEEEEcchhhhhc----C---CCC---------------------cEEEEC
Confidence 00 222356699999999866542 1 122 899999
Q ss_pred CCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCCc
Q 002665 271 PGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITT-LVKAFGECRPLRELAN 349 (895)
Q Consensus 271 ~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~-ll~A~~~l~~~~~~~~ 349 (895)
||+|.+.+.+.. ...++..++++++|+++|+....|+... +++|+..+. .+...
T Consensus 159 n~v~~~~~~~~~-----------------------~~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~--~~~~~ 213 (350)
T cd03785 159 NPVREEILALDR-----------------------ERARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELL--RKRLQ 213 (350)
T ss_pred CCCchHHhhhhh-----------------------hHHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhh--ccCeE
Confidence 999987664321 0222334567788988888777777765 458888774 23333
Q ss_pred EEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHH
Q 002665 350 LTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAA 429 (895)
Q Consensus 350 l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~ 429 (895)
+.+++|.+ ..+ ++.+.+..+ .+++.|.|++ +++..+|+.| |++|.++ + +++++|||
T Consensus 214 ~~~i~G~g-~~~-----------~l~~~~~~~--~~~v~~~g~~--~~~~~~l~~a----d~~v~~s---g-~~t~~Eam 269 (350)
T cd03785 214 VIHQTGKG-DLE-----------EVKKAYEEL--GVNYEVFPFI--DDMAAAYAAA----DLVISRA---G-ASTVAELA 269 (350)
T ss_pred EEEEcCCc-cHH-----------HHHHHHhcc--CCCeEEeehh--hhHHHHHHhc----CEEEECC---C-HhHHHHHH
Confidence 43466776 222 233444444 4689999996 8999999999 9999865 2 68999999
Q ss_pred HcCCCEEEcCCCC--------cccccccCCceEEeCCC--CHHHHHHHHHHHhhCHHHHHHHHHHHHHHHhhCCHHHHHH
Q 002665 430 AYGLPIVATKNGG--------PVDIHRVLDNGLLVDPH--DQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCK 499 (895)
Q Consensus 430 a~G~PVvat~~gg--------~~eiv~~~~~g~lv~p~--d~~~la~ai~~ll~~~~~~~~~~~~~~~~v~~~s~~~~a~ 499 (895)
++|+|||+++.++ ..+.+.+..+|+++++. |+++++++|.+++++++.+++++++++++++.+..+++++
T Consensus 270 ~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~i~~ 349 (350)
T cd03785 270 ALGLPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSDPERLKAMAEAARSLARPDAAERIAD 349 (350)
T ss_pred HhCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHh
Confidence 9999999987654 24566667789999987 8999999999999999999999999999888888777764
No 100
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.92 E-value=1.1e-23 Score=235.61 Aligned_cols=327 Identities=18% Similarity=0.168 Sum_probs=219.2
Q ss_pred CCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhhcccCCCCCcEEEEecCCCCCcccc
Q 002665 31 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQ 110 (895)
Q Consensus 31 ~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~g~~i~r~~~~~~~~~l~ 110 (895)
+||......+|+++|.++| |+|+++|+... ...+ .....|+++++++..+.. ...
T Consensus 10 ~~g~~~~~~~La~~L~~~g--~eV~vv~~~~~---------~~~~-------------~~~~~g~~~~~i~~~~~~-~~~ 64 (348)
T TIGR01133 10 TGGHIFPALAVAEELIKRG--VEVLWLGTKRG---------LEKR-------------LVPKAGIEFYFIPVGGLR-RKG 64 (348)
T ss_pred cHHHHhHHHHHHHHHHhCC--CEEEEEeCCCc---------chhc-------------ccccCCCceEEEeccCcC-CCC
Confidence 5677766679999999999 99999986310 0000 001147888888865421 111
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHHhccCCCCEEEEeCCCchhhHHHHHH
Q 002665 111 KELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLK 190 (895)
Q Consensus 111 k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~ 190 (895)
...... . ....+..+.++.+.+++ ++||+||+|...+...+..+++..++|+|++.++..+.
T Consensus 65 ~~~~l~---~-~~~~~~~~~~l~~~i~~-------~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~~------- 126 (348)
T TIGR01133 65 SFRLIK---T-PLKLLKAVFQARRILKK-------FKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAVPG------- 126 (348)
T ss_pred hHHHHH---H-HHHHHHHHHHHHHHHHh-------cCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCCcc-------
Confidence 100000 0 01123333344444444 67999999987666677777888899998655533110
Q ss_pred hCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeC
Q 002665 191 QGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIP 270 (895)
Q Consensus 191 ~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip 270 (895)
. .++...+.+|.+++.++...+.+ +..+||
T Consensus 127 --------------~-----~~~~~~~~~d~ii~~~~~~~~~~-------------------------------~~~~i~ 156 (348)
T TIGR01133 127 --------------L-----TNKLLSRFAKKVLISFPGAKDHF-------------------------------EAVLVG 156 (348)
T ss_pred --------------H-----HHHHHHHHhCeeEECchhHhhcC-------------------------------CceEEc
Confidence 0 02234678999999998654321 447899
Q ss_pred CCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCCc
Q 002665 271 PGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITT-LVKAFGECRPLRELAN 349 (895)
Q Consensus 271 ~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~-ll~A~~~l~~~~~~~~ 349 (895)
||+|...+.+.. . ..++..+++.++|+++|+....|++.. +++|+..+.. ...+
T Consensus 157 n~v~~~~~~~~~-~----------------------~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~--~~~~ 211 (348)
T TIGR01133 157 NPVRQEIRSLPV-P----------------------RERFGLREGKPTILVLGGSQGAKILNELVPKALAKLAE--KGIQ 211 (348)
T ss_pred CCcCHHHhcccc-h----------------------hhhcCCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhh--cCcE
Confidence 999876553211 0 012334567889999998888888665 4588887743 2344
Q ss_pred EEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHH
Q 002665 350 LTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAA 429 (895)
Q Consensus 350 l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~ 429 (895)
+.+++|+++. ..+.+.+.++++...+.|. ..++..+|..| |++|.++ | +.+++|||
T Consensus 212 ~~~~~g~~~~------------~~l~~~~~~~~l~~~v~~~----~~~~~~~l~~a----d~~v~~~---g-~~~l~Ea~ 267 (348)
T TIGR01133 212 IVHQTGKNDL------------EKVKNVYQELGIEAIVTFI----DENMAAAYAAA----DLVISRA---G-ASTVAELA 267 (348)
T ss_pred EEEECCcchH------------HHHHHHHhhCCceEEecCc----ccCHHHHHHhC----CEEEECC---C-hhHHHHHH
Confidence 5444454421 3445666667775555555 23899999999 9999764 3 68999999
Q ss_pred HcCCCEEEcCCCC-------cccccccCCceEEeCCCC--HHHHHHHHHHHhhCHHHHHHHHHHHHHHHhhCCHHHHHH
Q 002665 430 AYGLPIVATKNGG-------PVDIHRVLDNGLLVDPHD--QQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCK 499 (895)
Q Consensus 430 a~G~PVvat~~gg-------~~eiv~~~~~g~lv~p~d--~~~la~ai~~ll~~~~~~~~~~~~~~~~v~~~s~~~~a~ 499 (895)
++|+|+|+++.++ ..+++.+..+|+++++.| +++++++|.++++|++.+++|+++++++++.+..+++++
T Consensus 268 ~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~i~~ 346 (348)
T TIGR01133 268 AAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLDPANLEAMAEAARKLAKPDAAKRIAE 346 (348)
T ss_pred HcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcCHHHHHHHHHHHHhcCCccHHHHHHh
Confidence 9999999998654 235777888999998876 999999999999999999999999998887777666654
No 101
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.92 E-value=9.8e-25 Score=234.48 Aligned_cols=242 Identities=16% Similarity=0.123 Sum_probs=150.5
Q ss_pred ccEEEEEEecCCCC---hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCceEec
Q 002665 609 RKYVFVIAADCDTT---SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYY 685 (895)
Q Consensus 609 ~~kli~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~ 685 (895)
..|+||+|+||||. +.+++.++++|++|+++| +.|+|||||++..+..+++++++. +++||.||+.|+.
T Consensus 3 ~~kli~~DlDGTLl~~~~~~~~~~~~ai~~l~~~G----i~~~iaTgR~~~~~~~~~~~l~l~----~~~i~~nGa~i~~ 74 (273)
T PRK00192 3 MKLLVFTDLDGTLLDHHTYSYEPAKPALKALKEKG----IPVIPCTSKTAAEVEVLRKELGLE----DPFIVENGAAIYI 74 (273)
T ss_pred cceEEEEcCcccCcCCCCcCcHHHHHHHHHHHHCC----CEEEEEcCCCHHHHHHHHHHcCCC----CCEEEEcCcEEEe
Confidence 47999999999994 457788999999999987 999999999999999999999983 4799999999987
Q ss_pred CCCCCCCCCCCCcccCcchhhhhccccCcchHHHHHHHHhhhc---cCCCCc-c-------Ccc-c--ccccccccceEE
Q 002665 686 PSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASV---NDKKGE-E-------GKI-V--EEDESRSTIHCY 751 (895)
Q Consensus 686 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~-------~~~-~--~~~~~~~~~~k~ 751 (895)
.+.............+..|. .......+.+.+++..+.... ...... . ... . ..........++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (273)
T PRK00192 75 PKNYFPFQPDGERLKGDYWV--IELGPPYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEP 152 (273)
T ss_pred cccccccCCccccccCCceE--EEcCCCHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCc
Confidence 43110000000000000010 011111222222221111100 000000 0 000 0 000000011122
Q ss_pred EEEecCCCCCcCHHHHHHHHHhhcCeEEEEEeeCCeeEEeecCCCChHHHHHHHHHHhCCCc-ccEEEEeCcCCCccccc
Q 002665 752 AFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDL-SNVVVIAGECGDTDYEG 830 (895)
Q Consensus 752 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~lgi~~-~~viafgGD~nn~D~~~ 830 (895)
.+..... ...+.+.+.+...+ +.++.+ + .++||+|.+ |||+|+++|++++|+++ +++++ +||+.| | ++
T Consensus 153 ~~~~~~~---~~~~~~~~~l~~~~--~~~~~~-~-~~~ei~~~~-~Kg~al~~l~~~~~i~~~~~v~~-~GDs~N-D-i~ 221 (273)
T PRK00192 153 FLWNGSE---AAKERFEEALKRLG--LKVTRG-G-RFLHLLGGG-DKGKAVRWLKELYRRQDGVETIA-LGDSPN-D-LP 221 (273)
T ss_pred eeecCch---HHHHHHHHHHHHcC--CEEEEC-C-eEEEEeCCC-CHHHHHHHHHHHHhccCCceEEE-EcCChh-h-HH
Confidence 2212111 23445666665433 444443 4 499999999 99999999999999999 99999 666667 7 99
Q ss_pred cccCcceEEEEcCchhhhHhhhhcCCCCCCCcccCCC----Cc---eEEeccccChHHHHHHHHHh
Q 002665 831 LLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDS----HN---VIQVDEACDSYDIRASLEKL 889 (895)
Q Consensus 831 Ml~~ag~gVaMgNA~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~t~~~~~~gI~~al~~~ 889 (895)
||+.+|++|||+||. +.+| .. ..++|.+..+|||+++|+++
T Consensus 222 m~~~ag~~vam~NA~------------------~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~~ 269 (273)
T PRK00192 222 MLEAADIAVVVPGPD------------------GPNPPLLPGIADGEFILASAPGPEGWAEAINKL 269 (273)
T ss_pred HHHhCCeeEEeCCCC------------------CCCcccCccccCCceEEecCCCcHHHHHHHHHH
Confidence 999999999999999 3333 22 34445899999999999874
No 102
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=99.90 E-value=2.8e-23 Score=220.86 Aligned_cols=196 Identities=12% Similarity=0.046 Sum_probs=131.6
Q ss_pred cccEEEEEEecCCCCh--------hhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCC
Q 002665 608 RRKYVFVIAADCDTTS--------DFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNS 679 (895)
Q Consensus 608 ~~~kli~~DiDGTL~~--------~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~n 679 (895)
..+.+|++|+||||.. .+++.++++|++|++. +|+.|+|+|||++..+.++++.+++ .+||+|
T Consensus 12 ~~~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~---~g~~v~i~SGR~~~~~~~~~~~~~~------~~i~~n 82 (266)
T PRK10187 12 SANYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATA---NDGALALISGRSMVELDALAKPYRF------PLAGVH 82 (266)
T ss_pred CCCEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhC---CCCcEEEEeCCCHHHHHHhcCcccc------eEEEeC
Confidence 4578999999999943 5778999999999984 2499999999999999999988765 489999
Q ss_pred CceEecCCCCCCCCCCCCcccCcchhhhhccccCcc---hHHHHHHHHhhhccCCCCccCcccccccccccceEEEEEec
Q 002665 680 GSELYYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGE---GLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVT 756 (895)
Q Consensus 680 Ga~I~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 756 (895)
|++|+..+. .. +...+...|... .++.++.+.++...+.+ ...++++++
T Consensus 83 Ga~i~~~~~--------~~-----~~~~l~~~~~~~i~~~l~~~~~~~pg~~ve~k---------------~~~~~~h~r 134 (266)
T PRK10187 83 GAERRDING--------KT-----HIVHLPDAIARDISVQLHTALAQLPGAELEAK---------------GMAFALHYR 134 (266)
T ss_pred CCeeecCCC--------Ce-----eeccCChhHHHHHHHHHHHHhccCCCcEEEeC---------------CcEEEEECC
Confidence 999986431 00 001111111111 11122222233333322 233445554
Q ss_pred CCCC-CcCHHHHHHHHHhhcCeEEEEEeeCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCc
Q 002665 757 NPQM-IPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGV 835 (895)
Q Consensus 757 ~~~~-~~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~a 835 (895)
.... ...+.++.+.+.+....+. +.+++ .++||+|+++|||.||++|++++|++.+++++ +||+.| | ++||+.+
T Consensus 135 ~~~~~~~~~~~l~~~i~~~~~~~~-~~~g~-~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~-~GD~~n-D-~~mf~~~ 209 (266)
T PRK10187 135 QAPQHEDALLALAQRITQIWPQLA-LQPGK-CVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF-VGDDLT-D-EAGFAVV 209 (266)
T ss_pred CCCccHHHHHHHHHHHHhhCCceE-EeCCC-EEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE-EcCCcc-H-HHHHHHH
Confidence 3221 1122333334333322233 33555 59999999999999999999999999999988 566666 6 9999999
Q ss_pred ----ceEEEEcCch
Q 002665 836 ----HKTVILKGVG 845 (895)
Q Consensus 836 ----g~gVaMgNA~ 845 (895)
|.||+||||.
T Consensus 210 ~~~~g~~vavg~a~ 223 (266)
T PRK10187 210 NRLGGISVKVGTGA 223 (266)
T ss_pred HhcCCeEEEECCCC
Confidence 9999999998
No 103
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.89 E-value=2.7e-21 Score=222.14 Aligned_cols=284 Identities=15% Similarity=0.195 Sum_probs=188.3
Q ss_pred CCCcEEEeccCCchHHHHHHhccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEec
Q 002665 146 IWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITS 225 (895)
Q Consensus 146 ~~pDvIh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~ 225 (895)
++||+||++...........++..++|++++.|.+....... ++...+ .++..++.+|.|++.
T Consensus 123 ~~Pd~v~~~~~~~~~~~l~~~~~~~ip~vl~~~~~~~~s~~~---------------~~~~~~--~~r~~~~~~d~ii~~ 185 (425)
T PRK05749 123 WRPKLVIIMETELWPNLIAELKRRGIPLVLANARLSERSFKR---------------YQKFKR--FYRLLFKNIDLVLAQ 185 (425)
T ss_pred hCCCEEEEEecchhHHHHHHHHHCCCCEEEEeccCChhhHHH---------------HHHHHH--HHHHHHHhCCEEEEC
Confidence 579999988543222233445677999998766543222111 111111 244568899999999
Q ss_pred CHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhh
Q 002665 226 TRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWS 305 (895)
Q Consensus 226 s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (895)
|+...+.+.. + |+.. .+.++||+ +.+.+.+... ......
T Consensus 186 S~~~~~~l~~-~-----------------g~~~------~i~vi~n~-~~d~~~~~~~----------------~~~~~~ 224 (425)
T PRK05749 186 SEEDAERFLA-L-----------------GAKN------EVTVTGNL-KFDIEVPPEL----------------AARAAT 224 (425)
T ss_pred CHHHHHHHHH-c-----------------CCCC------CcEecccc-cccCCCChhh----------------HHHHHH
Confidence 9987766532 2 2211 27788874 3332221100 000111
Q ss_pred hhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhhhHHHHHHHHHHHHHcCCC
Q 002665 306 EIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLY 384 (895)
Q Consensus 306 ~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~ 384 (895)
...++. +++++++++|+. .|+.+.+++|+..+.+.. +++.+ ++|+++.. ..++.+++++.++.
T Consensus 225 ~r~~~~--~~~~vil~~~~~--~~~~~~ll~A~~~l~~~~--~~~~liivG~g~~r----------~~~l~~~~~~~gl~ 288 (425)
T PRK05749 225 LRRQLA--PNRPVWIAASTH--EGEEELVLDAHRALLKQF--PNLLLILVPRHPER----------FKEVEELLKKAGLS 288 (425)
T ss_pred HHHHhc--CCCcEEEEeCCC--chHHHHHHHHHHHHHHhC--CCcEEEEcCCChhh----------HHHHHHHHHhCCCc
Confidence 222232 467888998875 688999999999886433 44544 66876632 13455667777775
Q ss_pred CCEEeCCCCC------------CCcHHHHHHHhhcCCcEEEe-cCCCCCCChHHHHHHHcCCCEEEcCC-CCcccccccC
Q 002665 385 GQVAYPKHHK------------QSDVPDIYRLAAKTKGVFIN-PAFIEPFGLTLIEAAAYGLPIVATKN-GGPVDIHRVL 450 (895)
Q Consensus 385 ~~v~~~g~~~------------~~el~~ly~~a~~~~Dv~v~-ps~~eg~gl~~~Ea~a~G~PVvat~~-gg~~eiv~~~ 450 (895)
. +.+.+..+ ..++..+|+.| |++++ +|+.|++|.+++||||||+|||+++. ++..|+++..
T Consensus 289 ~-~~~~~~~~~~~~~~v~l~~~~~el~~~y~~a----Di~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~ 363 (425)
T PRK05749 289 Y-VRRSQGEPPSADTDVLLGDTMGELGLLYAIA----DIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERL 363 (425)
T ss_pred E-EEccCCCCCCCCCcEEEEecHHHHHHHHHhC----CEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHH
Confidence 2 44433211 35899999999 99666 57789999999999999999999874 6666665542
Q ss_pred -CceEEeCCCCHHHHHHHHHHHhhCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhhh
Q 002665 451 -DNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQ 510 (895)
Q Consensus 451 -~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~v~~~s~~~~a~~~~~~l~~~~~ 510 (895)
.+|.++.+.|+++++++|.++++|++.++++++++++.++.. ....+++++.+...++
T Consensus 364 ~~~g~~~~~~d~~~La~~l~~ll~~~~~~~~m~~~a~~~~~~~--~~~~~~~~~~l~~~l~ 422 (425)
T PRK05749 364 LQAGAAIQVEDAEDLAKAVTYLLTDPDARQAYGEAGVAFLKQN--QGALQRTLQLLEPYLP 422 (425)
T ss_pred HHCCCeEEECCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhC--ccHHHHHHHHHHHhcc
Confidence 457888899999999999999999999999999999999544 2666777777766543
No 104
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=99.88 E-value=5e-21 Score=218.59 Aligned_cols=250 Identities=13% Similarity=0.156 Sum_probs=157.1
Q ss_pred CcccccccEEEEEEecCCCC---hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCC
Q 002665 603 FPALRRRKYVFVIAADCDTT---SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNS 679 (895)
Q Consensus 603 ~~~~~~~~kli~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~n 679 (895)
.|.....+|+||+|+||||. +..++.++++|++++++| +.|++||||++..+..+++++++ .+++||+|
T Consensus 409 ~~~~~~~~KLIfsDLDGTLLd~d~~i~~~t~eAL~~L~ekG----I~~VIATGRs~~~i~~l~~~Lgl----~~~~I~eN 480 (694)
T PRK14502 409 LPSSGQFKKIVYTDLDGTLLNPLTYSYSTALDALRLLKDKE----LPLVFCSAKTMGEQDLYRNELGI----KDPFITEN 480 (694)
T ss_pred CCCcCceeeEEEEECcCCCcCCCCccCHHHHHHHHHHHHcC----CeEEEEeCCCHHHHHHHHHHcCC----CCeEEEcC
Confidence 34444789999999999994 345678899999999987 99999999999999999999998 36899999
Q ss_pred CceEecCCCCCCCCCCCCcccCcchhhhhccccCcchHHHHHHHHhhhcc---C----C-C--Ccc-Ccc-c--------
Q 002665 680 GSELYYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVN---D----K-K--GEE-GKI-V-------- 739 (895)
Q Consensus 680 Ga~I~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~-~--~~~-~~~-~-------- 739 (895)
|+.|+................+..+ .....+..+.+.++++....... . . . ... ... .
T Consensus 481 GA~I~~~~~~~~~~~~~~~~~~~~i--I~~~~l~~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei~~~Tg 558 (694)
T PRK14502 481 GGAIFIPKDYFRLPFAYDRVAGNYL--VIELGMAYKDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDVSRLTD 558 (694)
T ss_pred CCEEEECCCcccccccccccCCCeE--EEEcCCCHHHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHHHHhhC
Confidence 9999975421000000000000000 01112222233333322211000 0 0 0 000 000 0
Q ss_pred ------ccccccccceEEEEEecCCCCCcCHHHHHHHHHhhcCeEEEEEeeCCeeEEeecCCCChHHHHHHHHHHhCCCc
Q 002665 740 ------EEDESRSTIHCYAFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDL 813 (895)
Q Consensus 740 ------~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~lgi~~ 813 (895)
.+........|+.+. .+++ .++++.+.+.+.+ +++.. ++ +++||+ +++|||+||++|++++|++.
T Consensus 559 L~~~~a~~a~~Re~seKIl~~-gd~e---~Leel~~~L~~~~--l~v~~-g~-rfleI~-~gvdKG~AL~~L~e~~gI~~ 629 (694)
T PRK14502 559 LNLKQAELAKQREYSETVHIE-GDKR---STNIVLNHIQQSG--LEYSF-GG-RFYEVT-GGNDKGKAIKILNELFRLNF 629 (694)
T ss_pred CCHHHHHHHhhccCceeEEEc-CCHH---HHHHHHHHHHHcC--cEEEE-CC-EEEEeC-CCCCHHHHHHHHHHHhCCCc
Confidence 000001123455554 2222 4567777777653 44444 45 599999 59999999999999999999
Q ss_pred ccEEEEe-CcCCCccccccccCcceEEEEcCchhhhHhhhhcCCCCCCCcccCC-CCceEEeccccChHHHHHHHHHh
Q 002665 814 SNVVVIA-GECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFD-SHNVIQVDEACDSYDIRASLEKL 889 (895)
Q Consensus 814 ~~viafg-GD~nn~D~~~Ml~~ag~gVaMgNA~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~t~~~~~~gI~~al~~~ 889 (895)
+++++|+ ||+.| | ++||+.+|+||||++-.. .| +.+ .+... .|+.+..-|=.+|++++
T Consensus 630 ~eViafalGDs~N-D-isMLe~Ag~gVAM~~~~~---------~~------~~l~~~~~~-~~~~~GP~GW~eai~~~ 689 (694)
T PRK14502 630 GNIHTFGLGDSEN-D-YSMLETVDSPILVQRPGN---------KW------HKMRLRNPS-YVKGVGPEGFSRAVTDI 689 (694)
T ss_pred cceEEEEcCCcHh-h-HHHHHhCCceEEEcCCCC---------CC------CccCCCCce-ecCCCCcHHHHHHHHHH
Confidence 9999952 88888 8 999999999999987761 01 111 12233 66899999988888765
No 105
>PTZ00174 phosphomannomutase; Provisional
Probab=99.87 E-value=1.9e-21 Score=205.46 Aligned_cols=207 Identities=13% Similarity=0.067 Sum_probs=122.8
Q ss_pred cccEEEEEEecCCCC---hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCceEe
Q 002665 608 RRKYVFVIAADCDTT---SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELY 684 (895)
Q Consensus 608 ~~~kli~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~ 684 (895)
...|||++||||||. +.+++.++++|++++++| +.|+|||||++..+.+.++..... ..+++||+||+.|+
T Consensus 3 ~~~klia~DlDGTLL~~~~~is~~~~~ai~~l~~~G----i~~viaTGR~~~~i~~~l~~~~~~--~~~~~I~~NGa~I~ 76 (247)
T PTZ00174 3 MKKTILLFDVDGTLTKPRNPITQEMKDTLAKLKSKG----FKIGVVGGSDYPKIKEQLGEDVLE--DFDYVFSENGLVAY 76 (247)
T ss_pred CCCeEEEEECcCCCcCCCCCCCHHHHHHHHHHHHCC----CEEEEEcCCCHHHHHHHHhhhhhc--ccCeEEeCCceEEE
Confidence 457999999999993 568899999999999987 999999999999998888754321 13578999999999
Q ss_pred cCCCCCCCCCCCCcccCcchhhhhccccCcchHHHHHHHHh----hhccCCCCccCcccccccccccceEEEEEecCC--
Q 002665 685 YPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWA----ASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNP-- 758 (895)
Q Consensus 685 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~-- 758 (895)
..+ +...... +......+.+.++++... ....... ...+...... ...........
T Consensus 77 ~~~---------~~i~~~~----i~~~l~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~ 138 (247)
T PTZ00174 77 KDG---------ELFHSQS----ILKFLGEEKLKKFINFCLRYIADLDIPVK---RGTFIEYRNG--MINISPIGRNCSQ 138 (247)
T ss_pred ECC---------eEEEEEc----chhcCCHHHHHHHHHHHHHHHHhcCCccc---eeeeEEcCCc--eEEeccccccCCH
Confidence 632 1111111 100011122222221110 0000000 0000000000 00000000000
Q ss_pred ----------CCCcCHHHHHHHHHhhcCeEEEEEeeC-CeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEeCc----C
Q 002665 759 ----------QMIPPVKELRKLMRIQALRCHVIYCQN-GTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGE----C 823 (895)
Q Consensus 759 ----------~~~~~~~~l~~~l~~~~~~~~~~~s~~-~~~lEI~p~g~sKg~al~~L~~~lgi~~~~viafgGD----~ 823 (895)
.......++.+.+......+.+.++.+ ..++||+|+|+|||+||++|+++ ++++|| +|| +
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~----~~evia-fGD~~~~~ 213 (247)
T PTZ00174 139 EERDEFEKYDKEHHIREKFIQDLKKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND----FKEIHF-FGDKTFEG 213 (247)
T ss_pred HHHHHHHhcCCcchHHHHHHHHHHHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh----hhhEEE-EcccCCCC
Confidence 001122355555544333445555653 24899999999999999999998 589999 566 6
Q ss_pred CCccccccccCc-ceEEEEcCch
Q 002665 824 GDTDYEGLLGGV-HKTVILKGVG 845 (895)
Q Consensus 824 nn~D~~~Ml~~a-g~gVaMgNA~ 845 (895)
.| | ++||+.+ -.|++++||.
T Consensus 214 ~N-D-ieMl~~~~~~g~~v~n~~ 234 (247)
T PTZ00174 214 GN-D-YEIYNDPRTIGHSVKNPE 234 (247)
T ss_pred CC-c-HhhhhcCCCceEEeCCHH
Confidence 67 7 9999965 3456666998
No 106
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.87 E-value=1.3e-21 Score=203.84 Aligned_cols=203 Identities=13% Similarity=0.048 Sum_probs=125.1
Q ss_pred EEEEEecCCCCh--h-hHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCceEecCCC
Q 002665 612 VFVIAADCDTTS--D-FLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPSS 688 (895)
Q Consensus 612 li~~DiDGTL~~--~-~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~~ 688 (895)
+|++||||||++ . .++.++++|++|+++| +.|++||||++..+.++++++++. ..++||+||+.|+....
T Consensus 1 ~i~~DlDGTLL~~~~~~~~~~~~~l~~l~~~g----i~~~i~TgR~~~~~~~~~~~l~~~---~~~~I~~NGa~i~~~~~ 73 (221)
T TIGR02463 1 WVFSDLDGTLLDSHSYDWQPAAPWLTRLQEAG----IPVILCTSKTAAEVEYLQKALGLT---GDPYIAENGAAIHLEEL 73 (221)
T ss_pred CEEEeCCCCCcCCCCCCcHHHHHHHHHHHHCC----CeEEEEcCCCHHHHHHHHHHcCCC---CCcEEEeCCcEEEcCcc
Confidence 589999999943 2 4555999999999987 999999999999999999999982 15799999999987421
Q ss_pred CCCCCCCCCcccCcchhhhhccccCcchHHHHHHHHhh---hccCCCCcc-C-------cc-ccc-ccccccceEEEEEe
Q 002665 689 STEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAA---SVNDKKGEE-G-------KI-VEE-DESRSTIHCYAFEV 755 (895)
Q Consensus 689 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~-------~~-~~~-~~~~~~~~k~~~~~ 755 (895)
.. .. ...|. ....+..+.+.++++.... ......... . .. ... ........+..+..
T Consensus 74 ~~-------~~-~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (221)
T TIGR02463 74 WR-------EE-PGYPR--IILGISYGIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLW 143 (221)
T ss_pred cc-------cC-CCceE--EecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEe
Confidence 10 00 00000 0001111111111111000 000000000 0 00 000 00000112222332
Q ss_pred -cCCCCCcCHHHHHHHHHhhcCeEEEEEeeCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccC
Q 002665 756 -TNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGG 834 (895)
Q Consensus 756 -~~~~~~~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ 834 (895)
.++ ...+++.+.+...+ +.+..+ +. ++||+|++++||.|++++++++|++++++++ +||+.| | ++||+.
T Consensus 144 ~~~~---~~~~~~~~~l~~~~--~~~~~~-~~-~~ei~~~~~~Kg~al~~l~~~lgi~~~~vi~-~GD~~N-D-i~ml~~ 213 (221)
T TIGR02463 144 RDSD---SRMPRFTALLADLG--LAIVQG-NR-FSHVLGASSSKGKAANWLKATYNQPDVKTLG-LGDGPN-D-LPLLEV 213 (221)
T ss_pred cCch---hHHHHHHHHHHHcC--CeEEec-CC-eeEEecCCCCHHHHHHHHHHHhCCCCCcEEE-ECCCHH-H-HHHHHh
Confidence 212 23445666665433 455444 54 8999999999999999999999999999999 777777 7 999999
Q ss_pred cceEEEE
Q 002665 835 VHKTVIL 841 (895)
Q Consensus 835 ag~gVaM 841 (895)
+|+|||+
T Consensus 214 ag~~va~ 220 (221)
T TIGR02463 214 ADYAVVI 220 (221)
T ss_pred CCceEEe
Confidence 9999997
No 107
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.86 E-value=1.2e-19 Score=205.34 Aligned_cols=264 Identities=14% Similarity=0.093 Sum_probs=178.8
Q ss_pred CCCcEEEeccCCchHHHHHHhccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEec
Q 002665 146 IWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITS 225 (895)
Q Consensus 146 ~~pDvIh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~ 225 (895)
.+||+||++++......+..+...++|++...+++.... ++ ..+.+|.+++.
T Consensus 103 ~~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~td~~~~~----------------------~~------~~~~ad~i~~~ 154 (380)
T PRK13609 103 EKPDIVINTFPIIAVPELKKQTGISIPTYNVLTDFCLHK----------------------IW------VHREVDRYFVA 154 (380)
T ss_pred hCcCEEEEcChHHHHHHHHHhcCCCCCeEEEeCCCCCCc----------------------cc------ccCCCCEEEEC
Confidence 679999998765544444445566899887666642110 11 36789999999
Q ss_pred CHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhh
Q 002665 226 TRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWS 305 (895)
Q Consensus 226 s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (895)
|+...+.+.+ ++ ..+. ++.++++.++.. |.... ....
T Consensus 155 s~~~~~~l~~-~g-i~~~---------------------ki~v~G~p~~~~-f~~~~-------------------~~~~ 191 (380)
T PRK13609 155 TDHVKKVLVD-IG-VPPE---------------------QVVETGIPIRSS-FELKI-------------------NPDI 191 (380)
T ss_pred CHHHHHHHHH-cC-CChh---------------------HEEEECcccChH-HcCcC-------------------CHHH
Confidence 9876655432 22 2222 777776555432 32110 0112
Q ss_pred hhhhccCCCCCcE-EEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCC
Q 002665 306 EIMHFFSNPRKPM-ILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLY 384 (895)
Q Consensus 306 ~~~~~~~~~~~~~-Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~ 384 (895)
.+.++...+++++ +++.|++...|++..+++++.+. +..++++++|.++ .+...+.+.++.++
T Consensus 192 ~~~~~~l~~~~~~il~~~G~~~~~k~~~~li~~l~~~----~~~~~viv~G~~~----------~~~~~l~~~~~~~~-- 255 (380)
T PRK13609 192 IYNKYQLCPNKKILLIMAGAHGVLGNVKELCQSLMSV----PDLQVVVVCGKNE----------ALKQSLEDLQETNP-- 255 (380)
T ss_pred HHHHcCCCCCCcEEEEEcCCCCCCcCHHHHHHHHhhC----CCcEEEEEeCCCH----------HHHHHHHHHHhcCC--
Confidence 3344555566665 45568888889999999988642 3334433445332 12234445555444
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcC-CCCcc----cccccCCceEEeCCC
Q 002665 385 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATK-NGGPV----DIHRVLDNGLLVDPH 459 (895)
Q Consensus 385 ~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~-~gg~~----eiv~~~~~g~lv~p~ 459 (895)
.+|.|+|++ +++..+|+.| |+++. ++.|++++|||+||+|+|+++ .+|.. +.+. ..|..+.+.
T Consensus 256 ~~v~~~g~~--~~~~~l~~~a----D~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~--~~G~~~~~~ 323 (380)
T PRK13609 256 DALKVFGYV--ENIDELFRVT----SCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFE--RKGAAVVIR 323 (380)
T ss_pred CcEEEEech--hhHHHHHHhc----cEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHH--hCCcEEEEC
Confidence 579999996 5799999999 99874 566999999999999999986 55531 2332 235445567
Q ss_pred CHHHHHHHHHHHhhCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHh
Q 002665 460 DQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSC 508 (895)
Q Consensus 460 d~~~la~ai~~ll~~~~~~~~~~~~~~~~v~~~s~~~~a~~~~~~l~~~ 508 (895)
|+++++++|.+++++++.++++++++++..+.++++.+++.+++.+...
T Consensus 324 ~~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 324 DDEEVFAKTEALLQDDMKLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred CHHHHHHHHHHHHCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 9999999999999999999999999988778899999999998887644
No 108
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.86 E-value=1.1e-19 Score=204.91 Aligned_cols=264 Identities=18% Similarity=0.148 Sum_probs=176.1
Q ss_pred CCcEEEeccCCchHHHHHHhccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecC
Q 002665 147 WPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITST 226 (895)
Q Consensus 147 ~pDvIh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s 226 (895)
...|++++.+.+..++ +...+.++|++++|.+.... +. .. . .. ..|+..++.||.|++.|
T Consensus 102 ~~~i~~~~~P~~~~~~---~~~~~~~~Vyd~~D~~~~~~------~~-~~-----~---~~--~~e~~~~~~ad~vi~~S 161 (373)
T cd04950 102 GRPILWYYTPYTLPVA---ALLQASLVVYDCVDDLSAFP------GG-PP-----E---LL--EAERRLLKRADLVFTTS 161 (373)
T ss_pred CCcEEEEeCccHHHHH---hhcCCCeEEEEcccchhccC------CC-CH-----H---HH--HHHHHHHHhCCEEEECC
Confidence 4556666544333332 22568899999998754321 11 10 0 11 34788899999999999
Q ss_pred HHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhh
Q 002665 227 RQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSE 306 (895)
Q Consensus 227 ~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (895)
+...+.+. .+. .++.+||||+|.+.|.+...... .
T Consensus 162 ~~l~~~~~-~~~-------------------------~~i~~i~ngvd~~~f~~~~~~~~--------------~----- 196 (373)
T cd04950 162 PSLYEAKR-RLN-------------------------PNVVLVPNGVDYEHFAAARDPPP--------------P----- 196 (373)
T ss_pred HHHHHHHh-hCC-------------------------CCEEEcccccCHHHhhcccccCC--------------C-----
Confidence 97665432 221 18999999999998875431110 0
Q ss_pred hhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCC
Q 002665 307 IMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQ 386 (895)
Q Consensus 307 ~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~ 386 (895)
. +.....++++|+|+|+++..++++.+..+... .+++.+ +++|.++..... ..+.-.++
T Consensus 197 ~-~~~~~~~~~~i~y~G~l~~~~d~~ll~~la~~----~p~~~~-vliG~~~~~~~~---------------~~~~~~~n 255 (373)
T cd04950 197 P-ADLAALPRPVIGYYGAIAEWLDLELLEALAKA----RPDWSF-VLIGPVDVSIDP---------------SALLRLPN 255 (373)
T ss_pred h-hHHhcCCCCEEEEEeccccccCHHHHHHHHHH----CCCCEE-EEECCCcCccCh---------------hHhccCCC
Confidence 0 01123467899999999998887665554432 344444 467776221111 11112468
Q ss_pred EEeCCCCCCCcHHHHHHHhhcCCcEEEecCC-----CCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCH
Q 002665 387 VAYPKHHKQSDVPDIYRLAAKTKGVFINPAF-----IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQ 461 (895)
Q Consensus 387 v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~-----~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~ 461 (895)
|+|+|.++.++++.+|+.+ |++++|+. .+++|++++||||||+|||+|+.+...+. .. +.++.+.|+
T Consensus 256 V~~~G~~~~~~l~~~l~~~----Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~~~~---~~-~~~~~~~d~ 327 (373)
T cd04950 256 VHYLGPKPYKELPAYLAGF----DVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEVRRY---ED-EVVLIADDP 327 (373)
T ss_pred EEEeCCCCHHHHHHHHHhC----CEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHHHhh---cC-cEEEeCCCH
Confidence 9999999999999999999 99999975 34679999999999999999987654443 33 344446799
Q ss_pred HHHHHHHHHHhhCH-HHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Q 002665 462 QSIADALLKLVSDK-QLWERCRQNGLKNIHQFSWPEHCKSYLSRISS 507 (895)
Q Consensus 462 ~~la~ai~~ll~~~-~~~~~~~~~~~~~v~~~s~~~~a~~~~~~l~~ 507 (895)
++++++|.+++.++ .++.. .+++.++.|||+..++++++.+.+
T Consensus 328 ~~~~~ai~~~l~~~~~~~~~---~~~~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 328 EEFVAAIEKALLEDGPARER---RRLRLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred HHHHHHHHHHHhcCCchHHH---HHHHHHHHCCHHHHHHHHHHHHHh
Confidence 99999999987633 22222 122256899999999999977764
No 109
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.85 E-value=1.1e-20 Score=194.42 Aligned_cols=195 Identities=15% Similarity=0.198 Sum_probs=127.7
Q ss_pred EEEEEecCCCC----hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCceEecCC
Q 002665 612 VFVIAADCDTT----SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPS 687 (895)
Q Consensus 612 li~~DiDGTL~----~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~ 687 (895)
||++|+||||+ ..+++.+.++|++|+++| +.|+|+|||++..+.+++++++ +++||+||+.|+..+
T Consensus 1 li~~D~DgTL~~~~~~~~~~~~~~~l~~l~~~g----~~~~i~TGR~~~~~~~~~~~~~------~~~i~~nGa~i~~~~ 70 (204)
T TIGR01484 1 LLFFDLDGTLLDPNAHELSPETIEALERLREAG----VKVVLVTGRSLAEIKELLKQLP------LPLIAENGALIFYPG 70 (204)
T ss_pred CEEEeCcCCCcCCCCCcCCHHHHHHHHHHHHCC----CEEEEECCCCHHHHHHHHHhCC------CCEEECCCcEEEECC
Confidence 58999999994 357899999999999986 9999999999999999998843 469999999998743
Q ss_pred CCCCCCCCCCcc-cCcchhhhhccccCcchHHHHHHHHhhhccCCCCccCcccccccccccceEEEEEecCCCC-CcCHH
Q 002665 688 SSTEDNHGLPFL-VDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQM-IPPVK 765 (895)
Q Consensus 688 ~~~~~~~~~~~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~ 765 (895)
.. .+. ....|...+. |. +.+...+..+..... ..........+.+++..... .....
T Consensus 71 ~~-------~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~-----------~~~~e~~~~~~~~~~~~~~~~~~~~~ 129 (204)
T TIGR01484 71 EI-------LYIEPSDVFEEILG--IK-EEIGAELKSLSEHYV-----------GTFIEDKAIAVAIHYVGAELGQELDS 129 (204)
T ss_pred EE-------EEEcccccHHHHHH--hh-hhcCceeeeeccccc-----------cceeecccceeeEEEeccchhhHHHH
Confidence 10 000 0011111110 00 000000000000000 00011234455565543211 11123
Q ss_pred HHHHHHHhhc---CeEEEEEeeCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEE
Q 002665 766 ELRKLMRIQA---LRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 766 ~l~~~l~~~~---~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaM 841 (895)
.+...+.... ..+.++.+++. ++||+|++++||.|++++++++|++++++++ +||+.| | ++||+.+|++|||
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~s~~~-~~ev~p~~~~K~~~~~~~~~~~~~~~~~~~~-~GD~~n-D-~~~~~~~~~~vam 204 (204)
T TIGR01484 130 KMRERLEKIGRNDLELEAIYVGKT-DLEVLPAGVDKGSALQALLKELNGKRDEILA-FGDSGN-D-EEMFEVAGLAVAV 204 (204)
T ss_pred HHHHHHHhhccccCcEEEEEecCC-EEEEecCCCChHHHHHHHHHHhCCCHHHEEE-EcCCHH-H-HHHHHHcCCceEC
Confidence 4444444432 34677667776 9999999999999999999999999999998 666666 7 9999999999998
No 110
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.85 E-value=4.1e-19 Score=200.82 Aligned_cols=265 Identities=14% Similarity=0.077 Sum_probs=185.2
Q ss_pred CCCcEEEeccCC-chH---HHHHHh--ccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhcccc
Q 002665 146 IWPVAIHGHYAD-AGD---AAALLS--GALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDAS 219 (895)
Q Consensus 146 ~~pDvIh~h~~~-~~~---~~~~~~--~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~a 219 (895)
.+||+||++++. ... +...+. ...++|++.+..|++... ..| ..+.+
T Consensus 99 ~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~~---------------------~~w------~~~~~ 151 (382)
T PLN02605 99 YKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTCH---------------------PTW------FHKGV 151 (382)
T ss_pred cCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCcC---------------------ccc------ccCCC
Confidence 679999997643 222 222222 135799998888773110 011 36789
Q ss_pred CEEEecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCC
Q 002665 220 EIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASP 299 (895)
Q Consensus 220 d~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~ 299 (895)
|.++++|+...+.+.+ ++ ..+. ++.+++++++.+.+.+..
T Consensus 152 d~~~~~s~~~~~~l~~-~g-~~~~---------------------ki~v~g~~v~~~f~~~~~----------------- 191 (382)
T PLN02605 152 TRCFCPSEEVAKRALK-RG-LEPS---------------------QIRVYGLPIRPSFARAVR----------------- 191 (382)
T ss_pred CEEEECCHHHHHHHHH-cC-CCHH---------------------HEEEECcccCHhhccCCC-----------------
Confidence 9999999877655432 22 2332 899999999865442211
Q ss_pred CCchhhhhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc----cCCCcEEEEEecCCCchhhhhhhHHHHHHHH
Q 002665 300 DPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPL----RELANLTLIMGNRDDIDEMSGTNAALLLSIL 375 (895)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~----~~~~~l~livG~~~~~~~l~~~~~~~~~~i~ 375 (895)
.....+++++.++++++|+++||....|++..+++++..+... .+...+.+++|.++. +..++.
T Consensus 192 --~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~----------~~~~L~ 259 (382)
T PLN02605 192 --PKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNKK----------LQSKLE 259 (382)
T ss_pred --CHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCHH----------HHHHHH
Confidence 1223455667778899999999999999999999999765311 122334456675521 112222
Q ss_pred HHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCC------CCccccccc
Q 002665 376 KLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN------GGPVDIHRV 449 (895)
Q Consensus 376 ~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~------gg~~eiv~~ 449 (895)
+ .....+|.|.|++ ++++.+|+.| |++|.++ .|+++.||||||+|+|+++. |+...+ .+
T Consensus 260 ~----~~~~~~v~~~G~~--~~~~~l~~aa----Dv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i-~~ 324 (382)
T PLN02605 260 S----RDWKIPVKVRGFV--TNMEEWMGAC----DCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNVPYV-VD 324 (382)
T ss_pred h----hcccCCeEEEecc--ccHHHHHHhC----CEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhHHHH-Hh
Confidence 2 2223468999997 5899999999 9999754 58899999999999999983 444334 44
Q ss_pred CCceEEeCCCCHHHHHHHHHHHhhC-HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Q 002665 450 LDNGLLVDPHDQQSIADALLKLVSD-KQLWERCRQNGLKNIHQFSWPEHCKSYLSRIS 506 (895)
Q Consensus 450 ~~~g~lv~p~d~~~la~ai~~ll~~-~~~~~~~~~~~~~~v~~~s~~~~a~~~~~~l~ 506 (895)
.+.|+++ .|+++++++|.+++.+ ++.+++|++++++.....+++.+++.+.+...
T Consensus 325 ~g~g~~~--~~~~~la~~i~~ll~~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~~~ 380 (382)
T PLN02605 325 NGFGAFS--ESPKEIARIVAEWFGDKSDELEAMSENALKLARPEAVFDIVHDLHELVR 380 (382)
T ss_pred CCceeec--CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHhh
Confidence 4566654 7999999999999997 99999999999999888999988887776643
No 111
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.85 E-value=2.7e-19 Score=202.64 Aligned_cols=268 Identities=14% Similarity=0.120 Sum_probs=182.4
Q ss_pred CCCcEEEeccCCchHHHHHHhccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEec
Q 002665 146 IWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITS 225 (895)
Q Consensus 146 ~~pDvIh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~ 225 (895)
.+||+||++.+......+..++..++|++....++... .+| ..+.+|.+++.
T Consensus 103 ~kPDvVi~~~p~~~~~~l~~~~~~~iP~~~v~td~~~~----------------------~~w------~~~~~d~~~v~ 154 (391)
T PRK13608 103 EKPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYRLH----------------------KNW------ITPYSTRYYVA 154 (391)
T ss_pred hCcCEEEECCcHHHHHHHHHhcCCCCCEEEEeCCCCcc----------------------ccc------ccCCCCEEEEC
Confidence 67999999866443333333455689987665554110 011 25689999999
Q ss_pred CHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhh
Q 002665 226 TRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWS 305 (895)
Q Consensus 226 s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (895)
|+...+.+.+ . +..+. ++.+++++++.. |.... ....
T Consensus 155 s~~~~~~l~~-~-gi~~~---------------------ki~v~GiPv~~~-f~~~~-------------------~~~~ 191 (391)
T PRK13608 155 TKETKQDFID-V-GIDPS---------------------TVKVTGIPIDNK-FETPI-------------------DQKQ 191 (391)
T ss_pred CHHHHHHHHH-c-CCCHH---------------------HEEEECeecChH-hcccc-------------------cHHH
Confidence 9877665432 2 22332 788887777643 32111 0112
Q ss_pred hhhhccCCCCCcE-EEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCC
Q 002665 306 EIMHFFSNPRKPM-ILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLY 384 (895)
Q Consensus 306 ~~~~~~~~~~~~~-Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~ 384 (895)
..+++..++++++ +++.|++...||++.+++++.+. .+..++.+++|..+. +..++.. .++..
T Consensus 192 ~~~~~~l~~~~~~ilv~~G~lg~~k~~~~li~~~~~~---~~~~~~vvv~G~~~~----------l~~~l~~---~~~~~ 255 (391)
T PRK13608 192 WLIDNNLDPDKQTILMSAGAFGVSKGFDTMITDILAK---SANAQVVMICGKSKE----------LKRSLTA---KFKSN 255 (391)
T ss_pred HHHHcCCCCCCCEEEEECCCcccchhHHHHHHHHHhc---CCCceEEEEcCCCHH----------HHHHHHH---HhccC
Confidence 2344555566665 56789999899999999986432 233445445454321 1122222 23344
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcC-CCCc----ccccccCCceEEeCCC
Q 002665 385 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATK-NGGP----VDIHRVLDNGLLVDPH 459 (895)
Q Consensus 385 ~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~-~gg~----~eiv~~~~~g~lv~p~ 459 (895)
+++.+.|++ ++++.+|+.| |++|. .+.|+++.|||++|+|+|+++ .+|. ..++.+.+.|+. +.
T Consensus 256 ~~v~~~G~~--~~~~~~~~~a----Dl~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~--~~ 323 (391)
T PRK13608 256 ENVLILGYT--KHMNEWMASS----QLMIT----KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKI--AD 323 (391)
T ss_pred CCeEEEecc--chHHHHHHhh----hEEEe----CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEE--eC
Confidence 679999986 6899999999 99985 457899999999999999986 4442 123334445555 45
Q ss_pred CHHHHHHHHHHHhhCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhhhcC
Q 002665 460 DQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQRQ 512 (895)
Q Consensus 460 d~~~la~ai~~ll~~~~~~~~~~~~~~~~v~~~s~~~~a~~~~~~l~~~~~~~ 512 (895)
|+++++++|.+++++++.+++|++++++..+.|+++.+++.+++.+..+.+.+
T Consensus 324 ~~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~~~ 376 (391)
T PRK13608 324 TPEEAIKIVASLTNGNEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQPQ 376 (391)
T ss_pred CHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhhhh
Confidence 99999999999999999999999999999889999999999999998776554
No 112
>PLN02580 trehalose-phosphatase
Probab=99.84 E-value=3.7e-20 Score=201.43 Aligned_cols=218 Identities=14% Similarity=0.176 Sum_probs=139.0
Q ss_pred cccEEEEEEecCCCC--------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCC
Q 002665 608 RRKYVFVIAADCDTT--------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNS 679 (895)
Q Consensus 608 ~~~kli~~DiDGTL~--------~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~n 679 (895)
.++.+||+|+||||. ..+++.++++|+.|.+.. .++|.|||+...+.+++...++ +++++|
T Consensus 117 ~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~~-----~VAIVSGR~~~~L~~~l~~~~l------~laGsH 185 (384)
T PLN02580 117 GKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKYF-----PTAIISGRSRDKVYELVGLTEL------YYAGSH 185 (384)
T ss_pred cCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhCC-----CEEEEeCCCHHHHHHHhCCCCc------cEEEeC
Confidence 688999999999992 457889999999999873 6999999999999999976666 699999
Q ss_pred CceEecCCCCCCC-CCC-CCccc---Ccchhh-hhccccCc---c---hHHHHHHHHhhhccCCCCccCccccccccccc
Q 002665 680 GSELYYPSSSTED-NHG-LPFLV---DLDYRF-HTEYRWGG---E---GLRKTLVRWAASVNDKKGEEGKIVEEDESRST 747 (895)
Q Consensus 680 Ga~I~~~~~~~~~-~~~-~~~~~---d~~~~~-~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (895)
|.++......... .+. ..... ...|.. .....|.. + .+.+...+.++...+.+
T Consensus 186 G~e~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K--------------- 250 (384)
T PLN02580 186 GMDIMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENH--------------- 250 (384)
T ss_pred CceeecCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHhccCCCCEEEec---------------
Confidence 9999754211000 000 00000 011110 00112221 0 11122223344444433
Q ss_pred ceEEEEEecCCCCC--c-CHHHHHHHHHhhcCeEEEEEeeCCeeEEeec-CCCChHHHHHHHHHHhCCCccc-E-EEEeC
Q 002665 748 IHCYAFEVTNPQMI--P-PVKELRKLMRIQALRCHVIYCQNGTKLHVIP-VLASRSQALRYLHVRWGIDLSN-V-VVIAG 821 (895)
Q Consensus 748 ~~k~~~~~~~~~~~--~-~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p-~g~sKg~al~~L~~~lgi~~~~-v-iafgG 821 (895)
.+.+++|++..... . ..++++..+... ..+.++ .+.+++||.| .++|||.|+++|++++|++.++ + .+|+|
T Consensus 251 ~~svavHYR~a~~~~~~~~~~~l~~~l~~~-~~l~v~--~Gk~vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iG 327 (384)
T PLN02580 251 KFCVSVHYRNVDEKNWPLVAQCVHDVLKKY-PRLRLT--HGRKVLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIG 327 (384)
T ss_pred CcEEEEEeCCCCchHHHHHHHHHHHHHHhC-CceEEE--eCCeEEEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEEC
Confidence 67899999754321 1 112233333322 224443 4445999999 5999999999999999998764 3 35577
Q ss_pred cCCCccccccccC-----cceEEEEcCchhhhHhhhhcCCCCCCC
Q 002665 822 ECGDTDYEGLLGG-----VHKTVILKGVGESARKLHANRNYSLED 861 (895)
Q Consensus 822 D~nn~D~~~Ml~~-----ag~gVaMgNA~~~~~~~~~~~~~~~~~ 861 (895)
|+.| | ++||+. +|+||+|+|+. +...++|++++
T Consensus 328 DD~T-D-edmF~~L~~~~~G~~I~Vgn~~-----~~t~A~y~L~d 365 (384)
T PLN02580 328 DDRT-D-EDAFKVLREGNRGYGILVSSVP-----KESNAFYSLRD 365 (384)
T ss_pred CCch-H-HHHHHhhhccCCceEEEEecCC-----CCccceEEcCC
Confidence 7777 8 999996 59999999987 34455555554
No 113
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.83 E-value=3e-20 Score=185.59 Aligned_cols=162 Identities=31% Similarity=0.520 Sum_probs=140.2
Q ss_pred cCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEe
Q 002665 311 FSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAY 389 (895)
Q Consensus 311 ~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~ 389 (895)
....++++|+++||+++.||++.+++|+..+... ..+++.+ ++|.++. ...+...+..+++..++.|
T Consensus 10 ~~~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~-~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~i~~ 77 (172)
T PF00534_consen 10 KIPDKKKIILFIGRLDPEKGIDLLIEAFKKLKEK-KNPNYKLVIVGDGEY-----------KKELKNLIEKLNLKENIIF 77 (172)
T ss_dssp TT-TTSEEEEEESESSGGGTHHHHHHHHHHHHHH-HHTTEEEEEESHCCH-----------HHHHHHHHHHTTCGTTEEE
T ss_pred CCCCCCeEEEEEecCccccCHHHHHHHHHHHHhh-cCCCeEEEEEccccc-----------ccccccccccccccccccc
Confidence 3457789999999999999999999999998642 1344444 7774442 3456678888899899999
Q ss_pred CCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCHHHHHHHHH
Q 002665 390 PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALL 469 (895)
Q Consensus 390 ~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~ 469 (895)
++.++.+++..+|+.| |++|+||..|++|++++|||+||+|||+++.|+..|++.++.+|+++++.|+++++++|.
T Consensus 78 ~~~~~~~~l~~~~~~~----di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l~~~i~ 153 (172)
T PF00534_consen 78 LGYVPDDELDELYKSS----DIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPNDIEELADAIE 153 (172)
T ss_dssp EESHSHHHHHHHHHHT----SEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTSHHHHHHHHH
T ss_pred cccccccccccccccc----eeccccccccccccccccccccccceeeccccCCceeeccccceEEeCCCCHHHHHHHHH
Confidence 9999888999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCHHHHHHHHHHHHHH
Q 002665 470 KLVSDKQLWERCRQNGLKN 488 (895)
Q Consensus 470 ~ll~~~~~~~~~~~~~~~~ 488 (895)
+++++++.++.++++++++
T Consensus 154 ~~l~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 154 KLLNDPELRQKLGKNARER 172 (172)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCHHHHHHHHHHhcCC
Confidence 9999999999999999875
No 114
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=99.80 E-value=2.1e-19 Score=186.35 Aligned_cols=208 Identities=13% Similarity=0.015 Sum_probs=123.2
Q ss_pred EEEEEecCCCC--hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCceEecCCCC
Q 002665 612 VFVIAADCDTT--SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPSSS 689 (895)
Q Consensus 612 li~~DiDGTL~--~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~~~ 689 (895)
+|++|+||||. +..++.++++|++|+++| +.|++||||++..+.++++++++ .+++||+||+.|+.....
T Consensus 1 li~~DlDGTLl~~~~~~~~~~~ai~~l~~~G----~~~vi~TgR~~~~~~~~~~~lg~----~~~~I~~NGa~I~~~~~~ 72 (225)
T TIGR02461 1 VIFTDLDGTLLPPGYEPGPAREALEELKDLG----FPIVFVSSKTRAEQEYYREELGV----EPPFIVENGGAIFIPRGY 72 (225)
T ss_pred CEEEeCCCCCcCCCCCchHHHHHHHHHHHCC----CEEEEEeCCCHHHHHHHHHHcCC----CCcEEEcCCcEEEecCcc
Confidence 58999999993 456667999999999987 99999999999999999999998 357999999999875311
Q ss_pred CCCCCCCCcccCcchhhhhccccCcchHHHHHHHHhhhccCCCCccC-------------cccccccccccceEEEEEec
Q 002665 690 TEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEG-------------KIVEEDESRSTIHCYAFEVT 756 (895)
Q Consensus 690 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~k~~~~~~ 756 (895)
........-. +..+ ......+..+.++.+++....... ...... .............|+.+..
T Consensus 73 ~~~~~~~~~~-~~~~-~i~~~~l~~~~~~~il~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~- 148 (225)
T TIGR02461 73 FPFPVGAGRE-VGNY-EVIELGKPVAKIRAALKEAENEYG-LKYYGNSTAEEVEKLTGLPRELAPLAKRREYSETIFLW- 148 (225)
T ss_pred cccccccccc-CCCe-EEEEcCCCHHHHHHHHHHHHHhcC-ccchhcCCHHHHHHHHCcCHHHHHHHHhhhcCCcccCC-
Confidence 0000000000 0000 001111222222222221111000 000000 0000000011123443332
Q ss_pred CCCCCcCHHHHHHHHHhhcCeEEEEEeeCCeeEEeecCCCChHHHHHHHHHHhCC--CcccEEEEeCcCCCccccccccC
Q 002665 757 NPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGI--DLSNVVVIAGECGDTDYEGLLGG 834 (895)
Q Consensus 757 ~~~~~~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~lgi--~~~~viafgGD~nn~D~~~Ml~~ 834 (895)
+++ .+.++.+.+.. ..+++..+. .++++ +.++|||.|++.|++++++ +.+++++ +||+.| | ++||+.
T Consensus 149 ~~e---~~~~~~~~~~~--~~~~~~~s~--~~~~i-~~~~sK~~al~~l~~~~~~~~~~~~~i~-~GD~~n-D-~~ml~~ 217 (225)
T TIGR02461 149 SRE---GWEAILVTARA--RGLKYTHGG--RFYTV-HGGSDKGKAIKRLLDLYKLRPGAIESVG-LGDSEN-D-FPMFEV 217 (225)
T ss_pred CHH---HHHHHHHHHHH--cCCcEEECC--EEEEE-CCCCCHHHHHHHHHHHhccccCcccEEE-EcCCHH-H-HHHHHh
Confidence 222 23455555533 234555543 36776 5599999999999999987 6668999 777777 7 999999
Q ss_pred cceEEEEc
Q 002665 835 VHKTVILK 842 (895)
Q Consensus 835 ag~gVaMg 842 (895)
+|+||++|
T Consensus 218 ag~~v~v~ 225 (225)
T TIGR02461 218 VDLAFLVG 225 (225)
T ss_pred CCCcEecC
Confidence 99999986
No 115
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=99.80 E-value=6.4e-19 Score=185.79 Aligned_cols=194 Identities=13% Similarity=0.070 Sum_probs=124.4
Q ss_pred cccEEEEEEecCCCC--------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCC
Q 002665 608 RRKYVFVIAADCDTT--------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNS 679 (895)
Q Consensus 608 ~~~kli~~DiDGTL~--------~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~n 679 (895)
+++++|++|+||||. ..+++.+.++|+.|.+. +++.|+|+|||++..+...+ .++ .-+++++|
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~---~~~~v~ivSGR~~~~~~~~~---~~~---~~~l~g~h 71 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAAR---PHNAIWIISGRKFLEKWLGV---KLP---GLGLAGEH 71 (244)
T ss_pred CCcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhC---CCCeEEEEECCChhhccccC---CCC---ceeEEeec
Confidence 367999999999993 23568899999999887 46788999999877665433 221 11599999
Q ss_pred CceEecCCCCCCCCCCCCcccCcchhhh--hccccCc--chHHHHHHHHhhhccCCCCccCcccccccccccceEEEEEe
Q 002665 680 GSELYYPSSSTEDNHGLPFLVDLDYRFH--TEYRWGG--EGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEV 755 (895)
Q Consensus 680 Ga~I~~~~~~~~~~~~~~~~~d~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 755 (895)
|++++..+. . ..|... ....|.. ..+..++...++...+.+ .+.+++++
T Consensus 72 G~~~~~~g~---------~---~~~~~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K---------------~~s~~~hy 124 (244)
T TIGR00685 72 GCEMKDNGS---------C---QDWVNLTEKIPSWKVRANELREEITTRPGVFIERK---------------GVALAWHY 124 (244)
T ss_pred CEEEecCCC---------c---ceeeechhhhhhHHHHHHHHHHHHhcCCCcEEEec---------------ceEEEEEe
Confidence 999986321 0 011110 0112321 122222323344444433 46788888
Q ss_pred cCC-CCCcCHHHHHHHHHhhc--CeEEEEEeeCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccc
Q 002665 756 TNP-QMIPPVKELRKLMRIQA--LRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLL 832 (895)
Q Consensus 756 ~~~-~~~~~~~~l~~~l~~~~--~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml 832 (895)
+.. +......++.+.+.... ..+.++ .+..++|+.|.++|||.|++.++++++++.+++++ +||+.| | ++||
T Consensus 125 r~a~d~~~~~~~~~~~~~~~~~~~~~~v~--~g~~~~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~-iGD~~~-D-~~~~ 199 (244)
T TIGR00685 125 RQAPVPELARFRAKELKEKILSFTDLEVM--DGKAVVELKPRFVNKGEIVKRLLWHQPGSGISPVY-LGDDIT-D-EDAF 199 (244)
T ss_pred ccCCCcHHHHHHHHHHHHHHhcCCCEEEE--ECCeEEEEeeCCCCHHHHHHHHHHhcccCCCceEE-EcCCCc-H-HHHH
Confidence 654 22112122233232211 134333 34358999999999999999999999999888877 666666 7 9999
Q ss_pred cCc--------ceEEEEc
Q 002665 833 GGV--------HKTVILK 842 (895)
Q Consensus 833 ~~a--------g~gVaMg 842 (895)
+.+ +.+|+|+
T Consensus 200 ~~~~~~~~~~g~~~v~v~ 217 (244)
T TIGR00685 200 RVVNNQWGNYGFYPVPIG 217 (244)
T ss_pred HHHhcccCCCCeEEEEEe
Confidence 988 6899996
No 116
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.80 E-value=1.1e-16 Score=164.13 Aligned_cols=390 Identities=18% Similarity=0.284 Sum_probs=262.9
Q ss_pred CCCchhhHHHHHHHHHhcC-CCcceEEEeeccccCCCCCCCCCccccccccccchhhhcccCCCCCcEEEEecCCCCCcc
Q 002665 30 DTGGQVKYVVELARALGSM-PGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKY 108 (895)
Q Consensus 30 ~~GG~~~~v~~La~~L~~~-g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~g~~i~r~~~~~~~~~ 108 (895)
..||-++...-..+.+.+. ++ +...|+|..++. .+.+.+..+. +-+.--.+++++..+.+.. ++
T Consensus 55 AGGGGErVLW~Avr~~q~k~~n-~~~viYsGD~n~--------t~~~IL~k~k--~~F~idlDs~nI~Fi~Lk~----R~ 119 (465)
T KOG1387|consen 55 AGGGGERVLWKAVRITQRKFPN-NVIVIYSGDFNV--------TPENILNKVK--NKFDIDLDSDNIFFIYLKL----RY 119 (465)
T ss_pred CCCCcceehhHHHHHHHHhCCC-ceEEEEeCCCCC--------CHHHHHHHHH--HhcCceecccceEEEEEEe----ee
Confidence 4678888888888888775 32 455566654321 1111111100 0111123445777777665 67
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEec--cCCchHHHHHHhccCCCCEEEEeCCCchh--h
Q 002665 109 VQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGH--YADAGDAAALLSGALNVPMVFTGHSLGRD--K 184 (895)
Q Consensus 109 l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h--~~~~~~~~~~~~~~~~ip~v~t~H~~~~~--~ 184 (895)
+-....|++..-....+-..+..+....+ ..|||..-. |+++-. ..++..++|++...|-.--. -
T Consensus 120 lVea~~~~hfTllgQaigsmIl~~Eai~r--------~~Pdi~IDtMGY~fs~p---~~r~l~~~~V~aYvHYP~iS~DM 188 (465)
T KOG1387|consen 120 LVEASTWKHFTLLGQAIGSMILAFEAIIR--------FPPDIFIDTMGYPFSYP---IFRRLRRIPVVAYVHYPTISTDM 188 (465)
T ss_pred eeecccccceehHHHHHHHHHHHHHHHHh--------CCchheEecCCCcchhH---HHHHHccCceEEEEecccccHHH
Confidence 77777888876665555555544433333 459988644 233322 23335589999999954211 1
Q ss_pred HHHHHH---hCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCC
Q 002665 185 LEQLLK---QGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGR 261 (895)
Q Consensus 185 ~~~~~~---~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~ 261 (895)
...+.. .|.+.. .--..||++.++ -..+-..||.+++.|.-....+...+...
T Consensus 189 L~~l~qrq~s~~l~~-~KlaY~rlFa~l--Y~~~G~~ad~vm~NssWT~nHI~qiW~~~--------------------- 244 (465)
T KOG1387|consen 189 LKKLFQRQKSGILVW-GKLAYWRLFALL--YQSAGSKADIVMTNSSWTNNHIKQIWQSN--------------------- 244 (465)
T ss_pred HHHHHhhhhcchhhh-HHHHHHHHHHHH--HHhccccceEEEecchhhHHHHHHHhhcc---------------------
Confidence 111111 111110 011123434333 45567789999998876666665555442
Q ss_pred CCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhc
Q 002665 262 FMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGEC 341 (895)
Q Consensus 262 ~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l 341 (895)
.+.++++..+++........ ...+.+.+|++|...+.|+.. +|+.++..
T Consensus 245 ---~~~iVyPPC~~e~lks~~~t---------------------------e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~ 293 (465)
T KOG1387|consen 245 ---TCSIVYPPCSTEDLKSKFGT---------------------------EGERENQLLSLAQFRPEKNHK-ILQLFALY 293 (465)
T ss_pred ---ceeEEcCCCCHHHHHHHhcc---------------------------cCCcceEEEEEeecCcccccH-HHHHHHHH
Confidence 56777777776633211100 124578999999999999999 55555544
Q ss_pred ccccCC----CcEEE-EEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecC
Q 002665 342 RPLREL----ANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPA 416 (895)
Q Consensus 342 ~~~~~~----~~l~l-ivG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps 416 (895)
..+.|. .+..| ++|+....+ ..+.+..++.++..+.+..+|.|...+|.+++..+|..| -+.|++-
T Consensus 294 ~~~~pl~a~~~~iKL~ivGScRnee-----D~ervk~Lkd~a~~L~i~~~v~F~~N~Py~~lv~lL~~a----~iGvh~M 364 (465)
T KOG1387|consen 294 LKNEPLEASVSPIKLIIVGSCRNEE-----DEERVKSLKDLAEELKIPKHVQFEKNVPYEKLVELLGKA----TIGVHTM 364 (465)
T ss_pred HhcCchhhccCCceEEEEeccCChh-----hHHHHHHHHHHHHhcCCccceEEEecCCHHHHHHHhccc----eeehhhh
Confidence 434444 34444 667655433 356788999999999999999999999999999999999 8999999
Q ss_pred CCCCCChHHHHHHHcCCCEEEcCCCCcc-ccccc---CCceEEeCCCCHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHhh
Q 002665 417 FIEPFGLTLIEAAAYGLPIVATKNGGPV-DIHRV---LDNGLLVDPHDQQSIADALLKLVS-DKQLWERCRQNGLKNIHQ 491 (895)
Q Consensus 417 ~~eg~gl~~~Ea~a~G~PVvat~~gg~~-eiv~~---~~~g~lv~p~d~~~la~ai~~ll~-~~~~~~~~~~~~~~~v~~ 491 (895)
..|-||+.+.||||+|+-+|+.+.||+. ||+.. ..+|++.. +.++.+++|.+++. +++++..+++++|..+.+
T Consensus 365 wNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~--t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~R 442 (465)
T KOG1387|consen 365 WNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAP--TDEEYAEAILKIVKLNYDERNMMRRNARKSLAR 442 (465)
T ss_pred hhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeecC--ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988864 77754 23688884 88899999999998 888899999999999999
Q ss_pred CCHHHHHHHHHHHHHHhhhc
Q 002665 492 FSWPEHCKSYLSRISSCKQR 511 (895)
Q Consensus 492 ~s~~~~a~~~~~~l~~~~~~ 511 (895)
|+-....+.|...+..+++.
T Consensus 443 FsE~~F~kd~~~~i~kll~e 462 (465)
T KOG1387|consen 443 FGELKFDKDWENPICKLLEE 462 (465)
T ss_pred hhHHHHHHhHhHHHHHhhcc
Confidence 99999999999998887754
No 117
>PLN03017 trehalose-phosphatase
Probab=99.78 E-value=4.1e-18 Score=183.67 Aligned_cols=216 Identities=13% Similarity=0.119 Sum_probs=137.0
Q ss_pred cccEEEEEEecCCCC---h-----hhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCC
Q 002665 608 RRKYVFVIAADCDTT---S-----DFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNS 679 (895)
Q Consensus 608 ~~~kli~~DiDGTL~---~-----~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~n 679 (895)
.++.+||+||||||. + .+++.++++|++|+ ++ +.|+|+|||++..+.+++.-.+ -++|++|
T Consensus 109 ~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~----~~vaIvSGR~~~~l~~~~~l~~------l~l~g~h 177 (366)
T PLN03017 109 GKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KC----FPTAIVTGRCIDKVYNFVKLAE------LYYAGSH 177 (366)
T ss_pred CCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh-cC----CcEEEEeCCCHHHHHHhhcccC------ceEEEcC
Confidence 578899999999994 2 58889999999999 44 7899999999999998854322 2799999
Q ss_pred CceEecCCCCCCC---CCC-CCcccCcchhhhhccccCcchHHHHHHHHhhhccCCCCccCcccccccccccceEEEEEe
Q 002665 680 GSELYYPSSSTED---NHG-LPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEV 755 (895)
Q Consensus 680 Ga~I~~~~~~~~~---~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 755 (895)
|++|..+...... +.. ........|...+..- ...+.++....++...+.+ .+.+++|+
T Consensus 178 Ga~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~v--~~~L~~~~~~~pGa~VE~K---------------~~~vavHy 240 (366)
T PLN03017 178 GMDIKGPAKGFSRHKRVKQSLLYQPANDYLPMIDEV--YRQLLEKTKSTPGAKVENH---------------KFCASVHF 240 (366)
T ss_pred CcEEecCCCcceeccccccccccccchhhHHHHHHH--HHHHHHHHhcCCCCEEEec---------------CcEEEEEc
Confidence 9999864311000 000 0001111122222110 0112333444555555544 67899999
Q ss_pred cCCCCCcCHHHHHHHHHhh---cCeEEEEEeeCCeeEEeecC-CCChHHHHHHHHHHhCCCc--ccEEEEeCcCCCcccc
Q 002665 756 TNPQMIPPVKELRKLMRIQ---ALRCHVIYCQNGTKLHVIPV-LASRSQALRYLHVRWGIDL--SNVVVIAGECGDTDYE 829 (895)
Q Consensus 756 ~~~~~~~~~~~l~~~l~~~---~~~~~~~~s~~~~~lEI~p~-g~sKg~al~~L~~~lgi~~--~~viafgGD~nn~D~~ 829 (895)
+..+. ....++...+... ...+. ...+.+.+||.|. +++||.|+++|++.++... ..+.+|+||+-+ | +
T Consensus 241 R~ad~-~~~~~l~~~~~~vl~~~~~l~--v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~T-D-E 315 (366)
T PLN03017 241 RCVDE-KKWSELVLQVRSVLKNFPTLK--LTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRT-D-E 315 (366)
T ss_pred CcCCH-HHHHHHHHHHHHHHHhCCCcE--EeCCCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCc-c-H
Confidence 75432 1123333333321 12233 3455569999995 9999999999999998763 346677888886 8 9
Q ss_pred ccccCc-----ceEEEEcCchhhhHhhhhcCCCCCCC
Q 002665 830 GLLGGV-----HKTVILKGVGESARKLHANRNYSLED 861 (895)
Q Consensus 830 ~Ml~~a-----g~gVaMgNA~~~~~~~~~~~~~~~~~ 861 (895)
+||+.+ |.||.+|... +...+.|.+++
T Consensus 316 DaF~~L~~~~~G~gI~VG~~~-----k~T~A~y~L~d 347 (366)
T PLN03017 316 DAFKMLRDRGEGFGILVSKFP-----KDTDASYSLQD 347 (366)
T ss_pred HHHHHHhhcCCceEEEECCCC-----CCCcceEeCCC
Confidence 999965 5788888533 23455555544
No 118
>PLN02423 phosphomannomutase
Probab=99.77 E-value=4.7e-18 Score=178.66 Aligned_cols=203 Identities=11% Similarity=0.076 Sum_probs=118.2
Q ss_pred cccEEEEEEecCCCC---hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhC-CCCCCCCCEEEeCCCceE
Q 002665 608 RRKYVFVIAADCDTT---SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSG-GLSPLAFDAFICNSGSEL 683 (895)
Q Consensus 608 ~~~kli~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l-~l~~~~~d~~I~~nGa~I 683 (895)
..+.++++||||||. +.+++.+++++++|+++ +.|++||||++..+...+... .. .++++||+||+.|
T Consensus 5 ~~~~i~~~D~DGTLl~~~~~i~~~~~~ai~~l~~~-----i~fviaTGR~~~~~~~~~~~~~~~---~~~~~I~~NGa~i 76 (245)
T PLN02423 5 KPGVIALFDVDGTLTAPRKEATPEMLEFMKELRKV-----VTVGVVGGSDLSKISEQLGKTVIN---DYDYVFSENGLVA 76 (245)
T ss_pred ccceEEEEeccCCCcCCCCcCCHHHHHHHHHHHhC-----CEEEEECCcCHHHHHHHhcccccc---cCCEEEECCceEE
Confidence 455677799999993 56888999999999853 899999999999887777654 22 1247999999999
Q ss_pred ecCCCCCCCCCCCCcccCcchhhhhccccCcchHHHHHHHHhhh--ccCCCCccCcccccccccc---------------
Q 002665 684 YYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAAS--VNDKKGEEGKIVEEDESRS--------------- 746 (895)
Q Consensus 684 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--------------- 746 (895)
+..+ +.+. ...+......+.+.++++..... ........ ....+.....
T Consensus 77 ~~~g---------~~i~----~~~l~~~l~~~~~~~ii~~~~~~~~~~~i~~~~-~~~ie~~~~i~~~~~~~~~~~~~~~ 142 (245)
T PLN02423 77 HKDG---------KLIG----TQSLKSFLGEDKLKEFINFTLHYIADLDIPIKR-GTFIEFRSGMLNVSPIGRNCSQEER 142 (245)
T ss_pred EeCC---------EEEE----EecccccCCHHHHHHHHHHHHHHHHHcCCcccc-CCeEEccCCccccCcccccCCHhHH
Confidence 8532 1110 00011111112222222111000 00000000 0000000000
Q ss_pred -cceEEEEEecCCCCCcCHHHHHHHHHhhcCeEEEEEeeCC-eeEEeecCCCChHHHHHHHHHHhCCCcccEEEEeCc--
Q 002665 747 -TIHCYAFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNG-TKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGE-- 822 (895)
Q Consensus 747 -~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~s~~~-~~lEI~p~g~sKg~al~~L~~~lgi~~~~viafgGD-- 822 (895)
...++... .....++.+.+.+....+.++.|.++ .++||+|+|+|||.||+.|+ +++++|||||.
T Consensus 143 ~~~~~i~~i------~~~~~~~~~~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~-----~~~e~~aFGD~~~ 211 (245)
T PLN02423 143 DEFEKYDKV------HNIRPKMVSVLREKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE-----DFDEIHFFGDKTY 211 (245)
T ss_pred hhHHhhCcc------chHHHHHHHHHHHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc-----CcCeEEEEeccCC
Confidence 00111110 11223444555444344566656552 49999999999999999999 89999994442
Q ss_pred -CCCccccccccC-cceEEEEcCch
Q 002665 823 -CGDTDYEGLLGG-VHKTVILKGVG 845 (895)
Q Consensus 823 -~nn~D~~~Ml~~-ag~gVaMgNA~ 845 (895)
+.| | ++||+. .-.++.+.+=.
T Consensus 212 ~~~N-D-~eMl~~~~~~~~~~~~~~ 234 (245)
T PLN02423 212 EGGN-D-HEIFESERTIGHTVTSPD 234 (245)
T ss_pred CCCC-c-HHHHhCCCcceEEeCCHH
Confidence 566 6 999996 55788886544
No 119
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.77 E-value=2.4e-17 Score=170.76 Aligned_cols=252 Identities=15% Similarity=0.099 Sum_probs=148.3
Q ss_pred cEEEEEEecCCCC---hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCceEecC
Q 002665 610 KYVFVIAADCDTT---SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYP 686 (895)
Q Consensus 610 ~kli~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~ 686 (895)
.|+||+||||||. +...+.++++|++|+++| +.|++||||++.++..+++++++. +++||+||+.|+.+
T Consensus 1 ~KLIftDLDGTLLd~~~~~~~~a~~aL~~Lk~~G----I~vVlaTGRt~~ev~~l~~~Lgl~----~p~I~eNGA~I~~p 72 (302)
T PRK12702 1 MRLVLSSLDGSLLDLEFNSYGAARQALAALERRS----IPLVLYSLRTRAQLEHLCRQLRLE----HPFICEDGSAIYVP 72 (302)
T ss_pred CcEEEEeCCCCCcCCCCcCCHHHHHHHHHHHHCC----CEEEEEcCCCHHHHHHHHHHhCCC----CeEEEeCCcEEEEc
Confidence 4899999999994 457778999999999987 999999999999999999999983 58999999999976
Q ss_pred CCCCCCCC-CCCc-ccCcchhhhhccccCcchHHHHHHHHhhhccCC-CCccC---cccc-------cc--cccccceEE
Q 002665 687 SSSTEDNH-GLPF-LVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDK-KGEEG---KIVE-------ED--ESRSTIHCY 751 (895)
Q Consensus 687 ~~~~~~~~-~~~~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~-------~~--~~~~~~~k~ 751 (895)
......+. .... ..+..|. +........++..+.......... .+..+ ..+. +. ...++.+.-
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~--~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~~Re~SE 150 (302)
T PRK12702 73 EHYFPAGILDEQWQHRPPYYV--CALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQKREYSE 150 (302)
T ss_pred cccccccccccccccCCCceE--EecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCc
Confidence 32110000 0000 1111111 111112223333333332211100 00000 0000 00 001233333
Q ss_pred EEEecCCCCCcCHHHHHHHHHhhcCeEEEEEeeCCeeEEeec------------------C---CCChHHHHHHHHHHhC
Q 002665 752 AFEVTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIP------------------V---LASRSQALRYLHVRWG 810 (895)
Q Consensus 752 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p------------------~---g~sKg~al~~L~~~lg 810 (895)
.+...+.+ .++.+.+.+.+. +++ .+++|+-++. . +++||.|++.|.+.|.
T Consensus 151 p~~w~~~~-----~~~~~~~~~~g~--~~~--~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~ 221 (302)
T PRK12702 151 IFSYSGDP-----ARLREAFAQQEA--NLT--QHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQ 221 (302)
T ss_pred ceEecCCH-----HHHHHHHHHcCC--eEE--ecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHH
Confidence 33322222 133666666553 333 3335777776 5 9999999999999987
Q ss_pred CCcc--cEEEEeCcCCCccccccccCcceEEEEcCchhhhHhhhhcCCCCCCCcccCCCCceEEeccccChHHHHHHHHH
Q 002665 811 IDLS--NVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEK 888 (895)
Q Consensus 811 i~~~--~viafgGD~nn~D~~~Ml~~ag~gVaMgNA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~gI~~al~~ 888 (895)
-... .+++ .||+.| | ++||+.+.++|++.|..... ..+.+ ..+ +-+...+... .|......|=.+++.+
T Consensus 222 ~~~~~~~tia-LGDspN-D-~~mLe~~D~~vvi~~~~~~~-~~~~~--~~l--~~~~~~~~~~-~a~~~GP~GW~e~v~~ 292 (302)
T PRK12702 222 RHLGPIKALG-IGCSPP-D-LAFLRWSEQKVVLPSPIADS-LWKEA--LRL--GGPEVQPQWQ-LAQLPGPEGWNEVVLM 292 (302)
T ss_pred hccCCceEEE-ecCChh-h-HHHHHhCCeeEEecCCCCCC-ccccc--ccc--cCcccCccce-ecCCCCcHHHHHHHHH
Confidence 5422 5777 888888 8 99999999999997766100 00000 000 0022233334 6788899998888866
Q ss_pred h
Q 002665 889 L 889 (895)
Q Consensus 889 ~ 889 (895)
+
T Consensus 293 ~ 293 (302)
T PRK12702 293 W 293 (302)
T ss_pred H
Confidence 4
No 120
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.76 E-value=5.6e-17 Score=168.63 Aligned_cols=119 Identities=31% Similarity=0.473 Sum_probs=96.3
Q ss_pred EEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCC-CcH
Q 002665 321 ALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQ-SDV 398 (895)
Q Consensus 321 ~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~-~el 398 (895)
++|++.+.||++.+++++..+.+.. +++.+ ++|.+..... ....+.+.+...+|.+.++++. +++
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~--~~~~~~i~G~~~~~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~~ 175 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERG--PDLKLVIAGDGPEREY-----------LEELLAALLLLDRVIFLGGLDPEELL 175 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhC--CCeEEEEEeCCCChHH-----------HHHHHHhcCCcccEEEeCCCCcHHHH
Confidence 9999999999999999999996533 34444 6677654322 1222566777889999999854 455
Q ss_pred HHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEe
Q 002665 399 PDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLV 456 (895)
Q Consensus 399 ~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv 456 (895)
..+++.| |++++|+..|++|++++|||+||+|+|+++.++..|++.++.+|+++
T Consensus 176 ~~~~~~~----di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 176 ALLLAAA----DVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred HHHhhcC----CEEEecccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 6666668 99999999999999999999999999999999999998888889875
No 121
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.75 E-value=2.3e-15 Score=154.86 Aligned_cols=377 Identities=17% Similarity=0.145 Sum_probs=239.9
Q ss_pred HHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhhcccCCCCCcEEEEecCCCCCccccccccCC
Q 002665 37 YVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWP 116 (895)
Q Consensus 37 ~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~g~~i~r~~~~~~~~~l~k~~~~~ 116 (895)
....=|..|++.| ++|+++....+.| - +++...++++|+.++..|...+..+..
T Consensus 28 RMqYHA~Sla~~g--f~VdliGy~~s~p---------~------------e~l~~hprI~ih~m~~l~~~~~~p~~~--- 81 (444)
T KOG2941|consen 28 RMQYHALSLAKLG--FQVDLIGYVESIP---------L------------EELLNHPRIRIHGMPNLPFLQGGPRVL--- 81 (444)
T ss_pred HHHHHHHHHHHcC--CeEEEEEecCCCC---------h------------HHHhcCCceEEEeCCCCcccCCCchhh---
Confidence 4445788999999 9999997653211 1 223345789999988765422211111
Q ss_pred CchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccC---CchHHHHHHhccCCCCEEEEeCCCchhhHHHHHHhCC
Q 002665 117 HIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYA---DAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGR 193 (895)
Q Consensus 117 ~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~---~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~g~ 193 (895)
...++.+.++...+...+.. ..||+|..+.+ ++-.++.+.+...|.++++++|+++.. ...-+..|.
T Consensus 82 ------~l~lKvf~Qfl~Ll~aL~~~---~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ys-l~l~~~~g~ 151 (444)
T KOG2941|consen 82 ------FLPLKVFWQFLSLLWALFVL---RPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYS-LQLKLKLGF 151 (444)
T ss_pred ------hhHHHHHHHHHHHHHHHHhc---cCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHH-HHHHhhcCC
Confidence 11122222222222222221 45999999886 356667777788899999999999775 111122232
Q ss_pred CChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCC--
Q 002665 194 LSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPP-- 271 (895)
Q Consensus 194 ~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~-- 271 (895)
-+...+..++. |...-+.||.-.|+|+.+.+.+.+.++.- +..|++.
T Consensus 152 -----~h~lV~l~~~~--E~~fgk~a~~nLcVT~AMr~dL~qnWgi~------------------------ra~v~YDrP 200 (444)
T KOG2941|consen 152 -----QHPLVRLVRWL--EKYFGKLADYNLCVTKAMREDLIQNWGIN------------------------RAKVLYDRP 200 (444)
T ss_pred -----CCchHHHHHHH--HHHhhcccccchhhHHHHHHHHHHhcCCc------------------------eeEEEecCC
Confidence 12344555554 88889999999999999888776665421 2233221
Q ss_pred ---CCcCCC----cccCCCCCCCcccccCCCCCCCCCchhhhhhh------ccCCCCCcEEEEEeCCCCCCCHHHHHHHH
Q 002665 272 ---GIEFHH----IVRHNGDVDGEVERDEGSPASPDPPIWSEIMH------FFSNPRKPMILALARPDPKKNITTLVKAF 338 (895)
Q Consensus 272 ---Gid~~~----f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~ 338 (895)
+.+++. |.+-..+......+..+ ...-...+..++ ........++++.....+-.++..+++|+
T Consensus 201 ps~~~~l~~~H~lf~~l~~d~~~f~ar~~q---~~~~~~taf~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL 277 (444)
T KOG2941|consen 201 PSKPTPLDEQHELFMKLAGDHSPFRAREPQ---DKALERTAFTKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLEAL 277 (444)
T ss_pred CCCCCchhHHHHHHhhhccccchhhhcccc---cchhhhhhHhhhcccchhhhccCCCeEEEecCCCCCcccHHHHHHHH
Confidence 111111 22221111100000000 000011111111 12223345677777899999999999999
Q ss_pred Hhc-----ccccCCCcEEE-EEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEE
Q 002665 339 GEC-----RPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVF 412 (895)
Q Consensus 339 ~~l-----~~~~~~~~l~l-ivG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~ 412 (895)
... .+-...|+++. |-|.||.. +...+.+.+.+|...-....++..+|.+.++..|+ .+|+
T Consensus 278 ~~y~~~~~~~~~~lP~llciITGKGPlk-----------E~Y~~~I~~~~~~~v~~~tpWL~aEDYP~ll~saD--lGVc 344 (444)
T KOG2941|consen 278 VIYEEQLYDKTHNLPSLLCIITGKGPLK-----------EKYSQEIHEKNLQHVQVCTPWLEAEDYPKLLASAD--LGVC 344 (444)
T ss_pred HhhhhhhhhccCCCCcEEEEEcCCCchh-----------HHHHHHHHHhcccceeeeecccccccchhHhhccc--cceE
Confidence 843 22244566654 55777753 33446778889988777788999999999999991 2344
Q ss_pred EecCC-CCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHhh----CHHHHHHHHHHHHH
Q 002665 413 INPAF-IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVS----DKQLWERCRQNGLK 487 (895)
Q Consensus 413 v~ps~-~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~----~~~~~~~~~~~~~~ 487 (895)
+.+|. .=..++++.....||+||+|-+.....|+|+++.||++|+ |.++++++|.-+++ +..+..+..++.++
T Consensus 345 LHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e 422 (444)
T KOG2941|consen 345 LHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLDELVKHGENGLVFE--DSEELAEQLQMLFKNFPDNADELNQLKKNLRE 422 (444)
T ss_pred eeecCcccCcchhHHHhhcCCCceeeecchhHHHHHhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHH
Confidence 55543 4457899999999999999999999999999999999997 99999999999998 78888888888888
Q ss_pred HHhhCCHHHHHH
Q 002665 488 NIHQFSWPEHCK 499 (895)
Q Consensus 488 ~v~~~s~~~~a~ 499 (895)
. +++.|+..-+
T Consensus 423 ~-~e~RW~~~W~ 433 (444)
T KOG2941|consen 423 E-QELRWDESWE 433 (444)
T ss_pred H-HhhhHHHHHH
Confidence 7 5566654443
No 122
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.74 E-value=1.4e-15 Score=167.71 Aligned_cols=290 Identities=26% Similarity=0.301 Sum_probs=205.6
Q ss_pred CcEEEeccCCch---HHHHHHhccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEe
Q 002665 148 PVAIHGHYADAG---DAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVIT 224 (895)
Q Consensus 148 pDvIh~h~~~~~---~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~ 224 (895)
+|++|.+..... ..........+.+.+...|........... . .. ....... .............+.+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~--~~~~~~~-~~~~~~~~~~~~~~~~~~ 156 (381)
T COG0438 84 YDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPR--L--LL--LLGLLRL-LLKRLKKALRLLADRVIA 156 (381)
T ss_pred cceeeccccccccchhHHHhhccccCCcEEEeecCCccccccccc--c--hh--hHHHHHH-HHHHHHHhccccccEEEE
Confidence 589998765332 245566667788999999987543211000 0 00 0000000 000001111225788888
Q ss_pred cCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchh
Q 002665 225 STRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIW 304 (895)
Q Consensus 225 ~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (895)
.+..........+.. .++.++|++++...+.+....
T Consensus 157 ~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~-------------------- 192 (381)
T COG0438 157 VSPALKELLEALGVP------------------------NKIVVIPNGIDTEKFAPARIG-------------------- 192 (381)
T ss_pred CCHHHHHHHHHhCCC------------------------CCceEecCCcCHHHcCccccC--------------------
Confidence 887553222111111 168899999999877642100
Q ss_pred hhhhhccCCCC--CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcC
Q 002665 305 SEIMHFFSNPR--KPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYD 382 (895)
Q Consensus 305 ~~~~~~~~~~~--~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~ 382 (895)
..++ .+.++++||+.+.||++.+++++..+....+...+ +++|.++.. ...+......++
T Consensus 193 -------~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~-~~~g~~~~~----------~~~~~~~~~~~~ 254 (381)
T COG0438 193 -------LLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKL-VIVGDGPER----------REELEKLAKKLG 254 (381)
T ss_pred -------CCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEE-EEEcCCCcc----------HHHHHHHHHHhC
Confidence 1122 37999999999999999999999999643333222 477777653 123334667777
Q ss_pred CCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCHH
Q 002665 383 LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQ 462 (895)
Q Consensus 383 l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~ 462 (895)
..+++.|.|.++.+++..+|+.| |++++|+..|++|++++|||++|+|||+++.++..+++.++..|+++.+.+.+
T Consensus 255 ~~~~v~~~g~~~~~~~~~~~~~~----~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~ 330 (381)
T COG0438 255 LEDNVKFLGYVPDEELAELLASA----DVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGDVE 330 (381)
T ss_pred CCCcEEEecccCHHHHHHHHHhC----CEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEecCCCCHH
Confidence 77889999999888899999999 99999998899999999999999999999999999999877668888777899
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHHHHHhhh
Q 002665 463 SIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRISSCKQ 510 (895)
Q Consensus 463 ~la~ai~~ll~~~~~~~~~~~~~~~~v-~~~s~~~~a~~~~~~l~~~~~ 510 (895)
++++++..++++++.++.+.+.+++.+ +.|+|+..+..+.+.+.....
T Consensus 331 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (381)
T COG0438 331 ELADALEQLLEDPELREELGEAARERVEEEFSWERIAEQLLELYEELLA 379 (381)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 999999999998887888887677777 699999999999999987653
No 123
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.74 E-value=5.6e-17 Score=182.55 Aligned_cols=289 Identities=15% Similarity=0.088 Sum_probs=182.1
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCCCCcEEEecc-CCchHHHHHHhccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhH
Q 002665 124 AALTHIIQISKVLGEQVGSGQPIWPVAIHGHY-ADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTT 202 (895)
Q Consensus 124 ~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~-~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~ 202 (895)
.....+.++.+.+++ .+||+||+|. +..+.+++.+++..|+|++++-++.-.. +.... +.
T Consensus 70 ~~~~~~~~l~~~l~~-------~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~~s~--------~~~~~--~~-- 130 (365)
T TIGR00236 70 ITSNMLEGLEELLLE-------EKPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGLRTG--------DRYSP--MP-- 130 (365)
T ss_pred HHHHHHHHHHHHHHH-------cCCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCCCcC--------CCCCC--Cc--
Confidence 334444555555555 6799999996 4667778888999999998765543100 00000 00
Q ss_pred hhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCC-cCCCcccC
Q 002665 203 YKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGI-EFHHIVRH 281 (895)
Q Consensus 203 ~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gi-d~~~f~~~ 281 (895)
....++ ...+.+|.++++|+...+.+.+. +..+. ++.+++||+ |...+...
T Consensus 131 ~~~~r~-----~~~~~ad~~~~~s~~~~~~l~~~--G~~~~---------------------~I~vign~~~d~~~~~~~ 182 (365)
T TIGR00236 131 EEINRQ-----LTGHIADLHFAPTEQAKDNLLRE--NVKAD---------------------SIFVTGNTVIDALLTNVE 182 (365)
T ss_pred cHHHHH-----HHHHHHHhccCCCHHHHHHHHHc--CCCcc---------------------cEEEeCChHHHHHHHHHh
Confidence 001111 12335899999999887776442 23332 899999996 53322111
Q ss_pred CCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEe-CC-CCCCCHHHHHHHHHhcccccCCCcEEEEEecCCC
Q 002665 282 NGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALA-RP-DPKKNITTLVKAFGECRPLRELANLTLIMGNRDD 359 (895)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vg-rl-~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~ 359 (895)
... ....++++. .+++++++.+ |. ...||+..+++|+.++....++..++++.+..+.
T Consensus 183 ~~~------------------~~~~~~~~~--~~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~ 242 (365)
T TIGR00236 183 IAY------------------SSPVLSEFG--EDKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNPV 242 (365)
T ss_pred hcc------------------chhHHHhcC--CCCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCChH
Confidence 000 001112222 2345666655 43 2458999999999988543333343222232221
Q ss_pred chhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEc-
Q 002665 360 IDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVAT- 438 (895)
Q Consensus 360 ~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat- 438 (895)
. ... +.+.++..++|.|.+.++..++..+|+.| |+++.+| |..++|||+||+|||++
T Consensus 243 ~----------~~~---~~~~~~~~~~v~~~~~~~~~~~~~~l~~a----d~vv~~S-----g~~~~EA~a~g~PvI~~~ 300 (365)
T TIGR00236 243 V----------REP---LHKHLGDSKRVHLIEPLEYLDFLNLAANS----HLILTDS-----GGVQEEAPSLGKPVLVLR 300 (365)
T ss_pred H----------HHH---HHHHhCCCCCEEEECCCChHHHHHHHHhC----CEEEECC-----hhHHHHHHHcCCCEEECC
Confidence 1 111 22334555689999999889999999999 9998776 55689999999999996
Q ss_pred CCCCcccccccCCceEEeCCCCHHHHHHHHHHHhhCHHHHHHHHHHHHHHHhhCCHHHHHHHHHH
Q 002665 439 KNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLS 503 (895)
Q Consensus 439 ~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~v~~~s~~~~a~~~~~ 503 (895)
+.|+..+++..+ .++++ +.|+++++++|.+++++++.++++.++...+....+++++++.+.+
T Consensus 301 ~~~~~~e~~~~g-~~~lv-~~d~~~i~~ai~~ll~~~~~~~~~~~~~~~~g~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 301 DTTERPETVEAG-TNKLV-GTDKENITKAAKRLLTDPDEYKKMSNASNPYGDGEASERIVEELLN 363 (365)
T ss_pred CCCCChHHHhcC-ceEEe-CCCHHHHHHHHHHHHhChHHHHHhhhcCCCCcCchHHHHHHHHHHh
Confidence 678888888754 56666 5799999999999999998888877665333344555555554443
No 124
>PLN02151 trehalose-phosphatase
Probab=99.74 E-value=4.6e-17 Score=175.17 Aligned_cols=218 Identities=12% Similarity=0.140 Sum_probs=137.3
Q ss_pred cccEEEEEEecCCCC--------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCC
Q 002665 608 RRKYVFVIAADCDTT--------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNS 679 (895)
Q Consensus 608 ~~~kli~~DiDGTL~--------~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~n 679 (895)
.++.+||+|+||||. ..+++.++++|+.|.+. ..|+|+|||+...+.+++.-.++ +++++|
T Consensus 96 ~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~~-----~~vaIvSGR~~~~l~~~~~~~~l------~laGsH 164 (354)
T PLN02151 96 GKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAKC-----FPTAIVSGRCREKVSSFVKLTEL------YYAGSH 164 (354)
T ss_pred CCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhcC-----CCEEEEECCCHHHHHHHcCCccc------eEEEeC
Confidence 578999999999992 36788999999999954 57999999999999998865555 699999
Q ss_pred CceEecCCCCCC--CCCC-CCcccCcchhhhhccccCcchHHHHHHHHhhhccCCCCccCcccccccccccceEEEEEec
Q 002665 680 GSELYYPSSSTE--DNHG-LPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVT 756 (895)
Q Consensus 680 Ga~I~~~~~~~~--~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 756 (895)
|+++..+..... .... ........|...+..- ...+.+...+.++...+.+ .+.+++|++
T Consensus 165 G~e~~~p~~g~~~~~~~~~~~~~~~~~~~~~i~~v--~~~l~~~~~~~pG~~VE~K---------------~~slavHYR 227 (354)
T PLN02151 165 GMDIKGPEQGSKYKKENQSLLCQPATEFLPVINEV--YKKLVEKTKSIPGAKVENN---------------KFCASVHFR 227 (354)
T ss_pred CceeecCCCCccccccccccccccchhhHHHHHHH--HHHHHHHHhcCCCCEEEec---------------CcEEEEEeC
Confidence 999976421100 0000 0011112222221100 0112222334455555544 678999997
Q ss_pred CCCCCcCHHHHHHHHHhhcCeE-EEEEeeCCeeEEeecC-CCChHHHHHHHHHHhCCCc--ccEEEEeCcCCCccccccc
Q 002665 757 NPQMIPPVKELRKLMRIQALRC-HVIYCQNGTKLHVIPV-LASRSQALRYLHVRWGIDL--SNVVVIAGECGDTDYEGLL 832 (895)
Q Consensus 757 ~~~~~~~~~~l~~~l~~~~~~~-~~~~s~~~~~lEI~p~-g~sKg~al~~L~~~lgi~~--~~viafgGD~nn~D~~~Ml 832 (895)
..+.. ..+++...+....... .+...++.+.+||.|. +++||.|+++|++.++..- ..+.+|+||+-+ | ++||
T Consensus 228 ~a~~~-~~~~l~~~l~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~T-D-EDaF 304 (354)
T PLN02151 228 CVEEN-KWSDLANQVRSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRT-D-EDAF 304 (354)
T ss_pred CCChH-HHHHHHHHHHHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCc-H-HHHH
Confidence 55421 1233444443321111 1233455569999995 9999999999999988653 246677888886 8 9999
Q ss_pred cCc-----ceEEEEcCchhhhHhhhhcCCCCCCC
Q 002665 833 GGV-----HKTVILKGVGESARKLHANRNYSLED 861 (895)
Q Consensus 833 ~~a-----g~gVaMgNA~~~~~~~~~~~~~~~~~ 861 (895)
+.+ |.||-+|... +...++|.+++
T Consensus 305 ~~L~~~~~G~gI~Vg~~~-----k~T~A~y~L~d 333 (354)
T PLN02151 305 KILRDKKQGLGILVSKYA-----KETNASYSLQE 333 (354)
T ss_pred HHHhhcCCCccEEeccCC-----CCCcceEeCCC
Confidence 864 6777776433 34456566555
No 125
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.71 E-value=1.2e-15 Score=172.68 Aligned_cols=340 Identities=13% Similarity=0.017 Sum_probs=194.1
Q ss_pred CCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhhcccCCCCCcEEEEecCCCCCccc
Q 002665 30 DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYV 109 (895)
Q Consensus 30 ~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~g~~i~r~~~~~~~~~l 109 (895)
+|||...-.. ++++|.+.+ +++.+++... +.. +.. ....+...+.++..+
T Consensus 10 gt~G~i~~a~-l~~~L~~~~--~~~~~~~~~~--~~~--------~~~------------~~~~~~~~~~l~~~g----- 59 (380)
T PRK00025 10 EVSGDLLGAG-LIRALKARA--PNLEFVGVGG--PRM--------QAA------------GCESLFDMEELAVMG----- 59 (380)
T ss_pred CcCHHHHHHH-HHHHHHhcC--CCcEEEEEcc--HHH--------HhC------------CCccccCHHHhhhcc-----
Confidence 4899997777 999999987 7888886431 000 000 000111111111110
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCC-chHHHHHHhccCCCCEEEEeCCCchhhHHHH
Q 002665 110 QKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYAD-AGDAAALLSGALNVPMVFTGHSLGRDKLEQL 188 (895)
Q Consensus 110 ~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~-~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~ 188 (895)
++. ...+...+...+.++.+.+++ ++||+||++... ........++..++|++++.+......
T Consensus 60 ----~~~-~~~~~~~~~~~~~~~~~~l~~-------~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~~~~~---- 123 (380)
T PRK00025 60 ----LVE-VLPRLPRLLKIRRRLKRRLLA-------EPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPSVWAW---- 123 (380)
T ss_pred ----HHH-HHHHHHHHHHHHHHHHHHHHH-------cCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCchhhc----
Confidence 110 111222334444455555555 689999998642 222223345556999998766431100
Q ss_pred HHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEE
Q 002665 189 LKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVV 268 (895)
Q Consensus 189 ~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~v 268 (895)
. ....+ ...+.+|.++++++...+.+ ..++. ++.+
T Consensus 124 ------~-------~~~~~------~~~~~~d~i~~~~~~~~~~~-~~~g~-------------------------~~~~ 158 (380)
T PRK00025 124 ------R-------QGRAF------KIAKATDHVLALFPFEAAFY-DKLGV-------------------------PVTF 158 (380)
T ss_pred ------C-------chHHH------HHHHHHhhheeCCccCHHHH-HhcCC-------------------------CeEE
Confidence 0 00011 12567899999998655433 22211 4555
Q ss_pred eCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEE-EEe-CCCCC-CCHHHHHHHHHhccccc
Q 002665 269 IPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMIL-ALA-RPDPK-KNITTLVKAFGECRPLR 345 (895)
Q Consensus 269 ip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il-~vg-rl~~~-Kgi~~ll~A~~~l~~~~ 345 (895)
++|.+....... +.....+.++..++++++|+ +.| |.... ++++.+++|+..+.+..
T Consensus 159 ~G~p~~~~~~~~--------------------~~~~~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~ 218 (380)
T PRK00025 159 VGHPLADAIPLL--------------------PDRAAARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRY 218 (380)
T ss_pred ECcCHHHhcccc--------------------cChHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 555543221100 00112233455556667654 444 34333 45789999999886433
Q ss_pred CCCcEEE-EEecCCCchhhhhhhHHHHHHHHHHHHHc-CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCCh
Q 002665 346 ELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKY-DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGL 423 (895)
Q Consensus 346 ~~~~l~l-ivG~~~~~~~l~~~~~~~~~~i~~~~~~~-~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl 423 (895)
+ ++.+ ++|+.+.. ..++.+.+.++ ++. +.+. ..++..+|+.| |++|.+| |.
T Consensus 219 ~--~~~~ii~~~~~~~----------~~~~~~~~~~~~~~~--v~~~----~~~~~~~~~~a----Dl~v~~s-----G~ 271 (380)
T PRK00025 219 P--DLRFVLPLVNPKR----------REQIEEALAEYAGLE--VTLL----DGQKREAMAAA----DAALAAS-----GT 271 (380)
T ss_pred C--CeEEEEecCChhh----------HHHHHHHHhhcCCCC--eEEE----cccHHHHHHhC----CEEEECc-----cH
Confidence 3 4443 44432211 12333445555 443 4443 25899999999 9999986 78
Q ss_pred HHHHHHHcCCCEEEc-----------------CCCCcccccccCC--ceEEeCCCCHHHHHHHHHHHhhCHHHHHHHHHH
Q 002665 424 TLIEAAAYGLPIVAT-----------------KNGGPVDIHRVLD--NGLLVDPHDQQSIADALLKLVSDKQLWERCRQN 484 (895)
Q Consensus 424 ~~~Ea~a~G~PVvat-----------------~~gg~~eiv~~~~--~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~ 484 (895)
+.+|+|++|+|+|+. +.++..+++.++. .+++.+..|+++++++|.++++|++.+++++++
T Consensus 272 ~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~ 351 (380)
T PRK00025 272 VTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADGARRQALLEG 351 (380)
T ss_pred HHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 888999999999987 4566667776543 457777889999999999999999999999998
Q ss_pred HHHHHhhCCHHHHHHHHHHHHHHh
Q 002665 485 GLKNIHQFSWPEHCKSYLSRISSC 508 (895)
Q Consensus 485 ~~~~v~~~s~~~~a~~~~~~l~~~ 508 (895)
+.+..+.. -..-+++..+.+.++
T Consensus 352 ~~~~~~~~-~~~a~~~~~~~i~~~ 374 (380)
T PRK00025 352 FTELHQQL-RCGADERAAQAVLEL 374 (380)
T ss_pred HHHHHHHh-CCCHHHHHHHHHHHH
Confidence 86665432 122344444444443
No 126
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=99.71 E-value=1.5e-15 Score=168.23 Aligned_cols=246 Identities=11% Similarity=0.063 Sum_probs=163.6
Q ss_pred CCC-cEEEeccCCchH---HHHH--HhccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhcccc
Q 002665 146 IWP-VAIHGHYADAGD---AAAL--LSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDAS 219 (895)
Q Consensus 146 ~~p-DvIh~h~~~~~~---~~~~--~~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~a 219 (895)
.++ |+||.+++.... .... ..++.|+|+|+++|++++.... ..+ ..+ ..|...++.|
T Consensus 62 ~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~---~~~------------~~~--~~~~~~~~~a 124 (333)
T PRK09814 62 LKPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFD---SNY------------YLM--KEEIDMLNLA 124 (333)
T ss_pred CCCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhcc---ccc------------hhh--HHHHHHHHhC
Confidence 346 999999864321 1222 2233489999999998765311 000 011 2366779999
Q ss_pred CEEEecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCC
Q 002665 220 EIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASP 299 (895)
Q Consensus 220 d~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~ 299 (895)
|.||+.|+...+.+.+ ++ ..+ .++.++++..+.....+..
T Consensus 125 D~iI~~S~~~~~~l~~-~g-~~~---------------------~~i~~~~~~~~~~~~~~~~----------------- 164 (333)
T PRK09814 125 DVLIVHSKKMKDRLVE-EG-LTT---------------------DKIIVQGIFDYLNDIELVK----------------- 164 (333)
T ss_pred CEEEECCHHHHHHHHH-cC-CCc---------------------CceEecccccccccccccc-----------------
Confidence 9999999987776533 21 111 1666666554332111000
Q ss_pred CCchhhhhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHH
Q 002665 300 DPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLID 379 (895)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~ 379 (895)
.....+.|+|+|++...+++ .. ..+...+ +++|+++...
T Consensus 165 ------------~~~~~~~i~yaG~l~k~~~l----~~------~~~~~~l-~i~G~g~~~~------------------ 203 (333)
T PRK09814 165 ------------TPSFQKKINFAGNLEKSPFL----KN------WSQGIKL-TVFGPNPEDL------------------ 203 (333)
T ss_pred ------------cccCCceEEEecChhhchHH----Hh------cCCCCeE-EEECCCcccc------------------
Confidence 01345689999999843321 11 1222233 4778876321
Q ss_pred HcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCC-----------CCCCChHHHHHHHcCCCEEEcCCCCcccccc
Q 002665 380 KYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAF-----------IEPFGLTLIEAAAYGLPIVATKNGGPVDIHR 448 (895)
Q Consensus 380 ~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~-----------~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~ 448 (895)
...++|.|.|+++.++++.+|+.. +.+++.. .-.+|.++.||||||+|||+++.++..++|+
T Consensus 204 --~~~~~V~f~G~~~~eel~~~l~~~-----~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~ 276 (333)
T PRK09814 204 --ENSANISYKGWFDPEELPNELSKG-----FGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIV 276 (333)
T ss_pred --ccCCCeEEecCCCHHHHHHHHhcC-----cCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHH
Confidence 244689999999999999999874 3333321 2356788999999999999999999999999
Q ss_pred cCCceEEeCCCCHHHHHHHHHHHhhCHHHHHHHHHHHHHHHhhCCHHHHHHH
Q 002665 449 VLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKS 500 (895)
Q Consensus 449 ~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~v~~~s~~~~a~~ 500 (895)
++.+|++++ +.++++++|.++ +++++++|++++++..+++.-....++
T Consensus 277 ~~~~G~~v~--~~~el~~~l~~~--~~~~~~~m~~n~~~~~~~~~~g~~~~~ 324 (333)
T PRK09814 277 ENGLGFVVD--SLEELPEIIDNI--TEEEYQEMVENVKKISKLLRNGYFTKK 324 (333)
T ss_pred hCCceEEeC--CHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHhcchhHHH
Confidence 999999997 788999999885 467789999999998865554444443
No 127
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=99.70 E-value=9.8e-16 Score=178.79 Aligned_cols=334 Identities=16% Similarity=0.193 Sum_probs=217.4
Q ss_pred CCCcEEEeccCCchHHHHHHhcc--------------CCCCEEEEeCCCchhhHH----HHHH---------hCCCChhh
Q 002665 146 IWPVAIHGHYADAGDAAALLSGA--------------LNVPMVFTGHSLGRDKLE----QLLK---------QGRLSRDE 198 (895)
Q Consensus 146 ~~pDvIh~h~~~~~~~~~~~~~~--------------~~ip~v~t~H~~~~~~~~----~~~~---------~g~~~~~~ 198 (895)
.+|||||+|.|.++++...+.+. ....+|||.|++.++-.. .++. .|. ....
T Consensus 160 ~~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~~~~~~gl-~~~~ 238 (601)
T TIGR02094 160 IDPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGDYAANLGL-PREQ 238 (601)
T ss_pred CCceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhhhhhHhCC-CHHH
Confidence 57999999999888887664221 146789999998554321 1111 011 1111
Q ss_pred hhhHhhHH----HhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCc
Q 002665 199 INTTYKIM----RRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIE 274 (895)
Q Consensus 199 ~~~~~~~~----~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid 274 (895)
+....... ..+..-..++..|+.|.++|+...+-..+.++.+.+..+ . + ..++.-|-||||
T Consensus 239 ~~~~~~~~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l~~~l~~~~~-------~-------~-~~~i~gItNGId 303 (601)
T TIGR02094 239 LLALGRENPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKMWQFLYPGYE-------E-------E-EVPIGYVTNGVH 303 (601)
T ss_pred HHhhhhhccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHHHHhhhhhcc-------c-------c-cCCccceeCCcc
Confidence 11000000 123345667889999999999777633222222111000 0 0 015788999999
Q ss_pred CCCcccCCCCCCCcccccCCCCCC---------------CCCchh-------hhhhh-----------------------
Q 002665 275 FHHIVRHNGDVDGEVERDEGSPAS---------------PDPPIW-------SEIMH----------------------- 309 (895)
Q Consensus 275 ~~~f~~~~~~~~~~~~~~~~~~~~---------------~~~~~~-------~~~~~----------------------- 309 (895)
+..+.+.... ....++....+. .....| ..+.+
T Consensus 304 ~~~W~~~~~~--~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~ 381 (601)
T TIGR02094 304 NPTWVAPELR--DLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMAT 381 (601)
T ss_pred ccccCCHHHH--HHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhhh
Confidence 9988753211 111111111100 000000 01111
Q ss_pred -ccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc--cCCCcEEE-EEecCCCchhhhhhhHHHHHHHHHHHHHcCCCC
Q 002665 310 -FFSNPRKPMILALARPDPKKNITTLVKAFGECRPL--RELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYG 385 (895)
Q Consensus 310 -~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~--~~~~~l~l-ivG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~ 385 (895)
....++.++++++.|+...||++++++++.++.++ .+...+++ ++|.+...+.+ ..++...+..+.++....+
T Consensus 382 gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p~d~~---gk~~i~~i~~la~~~~~~~ 458 (601)
T TIGR02094 382 DRFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHPADGE---GKEIIQRIVEFSKRPEFRG 458 (601)
T ss_pred ccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcccch---HHHHHHHHHHHHhcccCCC
Confidence 11457889999999999999999999999988642 22233444 66766543332 2446677777777766777
Q ss_pred CEEeCCCCCCCcHHHHHHHhhcCCcEEEe-cCC-CCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCC-----
Q 002665 386 QVAYPKHHKQSDVPDIYRLAAKTKGVFIN-PAF-IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDP----- 458 (895)
Q Consensus 386 ~v~~~g~~~~~el~~ly~~a~~~~Dv~v~-ps~-~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p----- 458 (895)
+|.|.-..+..--..+|..| |++++ |+. +|++|++-+=||..|.+.+++..|+..|.. ++.+|+.+.+
T Consensus 459 kv~f~~~Yd~~lA~~i~aG~----Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~~~~~ 533 (601)
T TIGR02094 459 RIVFLENYDINLARYLVSGV----DVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDGEEYD 533 (601)
T ss_pred CEEEEcCCCHHHHHHHhhhh----eeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCCcccc
Confidence 88887766444455566666 99999 888 999999999999999999999999998876 5679999984
Q ss_pred -------CCHHHHHHHHHHHh-----hC-----HHHHHHHHHHHHHHH-hhCCHHHHHHHHHHHH
Q 002665 459 -------HDQQSIADALLKLV-----SD-----KQLWERCRQNGLKNI-HQFSWPEHCKSYLSRI 505 (895)
Q Consensus 459 -------~d~~~la~ai~~ll-----~~-----~~~~~~~~~~~~~~v-~~~s~~~~a~~~~~~l 505 (895)
.|.+++.++|.+.+ ++ |..|.++++++.+.. ..|||++++++|.+.|
T Consensus 534 ~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 534 DEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred ccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 79999999998766 22 566888888888876 6899999999999876
No 128
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=99.68 E-value=5.4e-17 Score=170.35 Aligned_cols=210 Identities=18% Similarity=0.172 Sum_probs=108.2
Q ss_pred EEEecCCCC--------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCceEec
Q 002665 614 VIAADCDTT--------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYY 685 (895)
Q Consensus 614 ~~DiDGTL~--------~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~ 685 (895)
|+|+||||. ..+++.+.++|++|.+. +++.|+|.|||+...+..+..-.++ +++++||+++..
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~---~~~~v~IvSGR~~~~~~~~~~~~~i------~l~gehG~e~~~ 71 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAAD---PNNTVAIVSGRSLDDLERFGGIPNI------GLAGEHGAEIRR 71 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHH---SE--EEEE-SS-HHHHHHH-S-SS-------EEEEGGGTEEEE
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhcc---CCCEEEEEEeCCHHHhHHhcCCCCc------eEEEEeeEEecc
Confidence 699999992 46788999999999998 4678999999999995555443344 799999999998
Q ss_pred CCCCCCCCCCCCcccCcchhhhhccccCcchHHHHHHHHhhhccCCCCccCcccccccccccceEEEEEecCCCCC---c
Q 002665 686 PSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMI---P 762 (895)
Q Consensus 686 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~---~ 762 (895)
.+...... .....+..|...+. +.++.+..+.++...+.+ .+.++||++..... .
T Consensus 72 ~~~~~~~~--~~~~~~~~~~~~~~-----~~l~~~~~~~pG~~iE~K---------------~~sv~~Hyr~~~~~~~~~ 129 (235)
T PF02358_consen 72 PGGSEWTN--LPADEDLEWKDEVR-----EILEYFAERTPGSFIEDK---------------EFSVAFHYRNAPPEFGEA 129 (235)
T ss_dssp TTE-EEE---TTGGGGHHHHHHHH-----HHHTTHHHHSTT-EEEEE---------------TTEEEEE-TTS-ST----
T ss_pred Cccccccc--cccccchHHHHHHH-----HHHHHHHhhccCcEEEEC---------------CeEEEEEecCCCcchhhh
Confidence 64100000 00011112222221 123334445666655544 56889998765533 1
Q ss_pred CHHHHHHHHHhh---cCeEEEEEeeCCeeEEeecCCCChHHHHHHHHHHhCCC---cccEEEEeCcCCCccccccccCc-
Q 002665 763 PVKELRKLMRIQ---ALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGID---LSNVVVIAGECGDTDYEGLLGGV- 835 (895)
Q Consensus 763 ~~~~l~~~l~~~---~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~lgi~---~~~viafgGD~nn~D~~~Ml~~a- 835 (895)
...++.+.+.+. ...+.++. +. ..+||.|.+++||.|+++|++.++.. .+ +++|+||+-+ | ++||+.+
T Consensus 130 ~~~~l~~~l~~~~~~~~~~~v~~-g~-~~vEvrp~~~~KG~av~~ll~~~~~~~~~~~-~~l~~GDD~t-D-E~~f~~~~ 204 (235)
T PF02358_consen 130 QARELAEQLREILASHPGLEVVP-GK-KVVEVRPPGVNKGSAVRRLLEELPFAGPKPD-FVLYIGDDRT-D-EDAFRALR 204 (235)
T ss_dssp THHHHHHHHHHHHHHH-T-EEEE--S-SEEEEE-TT--HHHHHHHHHTTS----------EEEEESSHH-H-HHHHHTTT
T ss_pred HHHHHHHHHHHHHHhCCCEEEEE-CC-CEEEEEeCCCChHHHHHHHHHhcCccccccc-eeEEecCCCC-C-HHHHHHHH
Confidence 345555555542 12344433 33 49999999999999999999988764 33 4444666665 7 9999974
Q ss_pred -----ceEEEEcCchhhhHhhhhcCCCCCCC
Q 002665 836 -----HKTVILKGVGESARKLHANRNYSLED 861 (895)
Q Consensus 836 -----g~gVaMgNA~~~~~~~~~~~~~~~~~ 861 (895)
|.+|-++... ...++++++|.++|
T Consensus 205 ~~~~~~~~i~V~~~~--~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 205 ELEEGGFGIKVGSVS--VGEKPTAASYRLDD 233 (235)
T ss_dssp TS----EEEEES-------------------
T ss_pred hcccCCCCeEEEeec--cccccccccccccc
Confidence 5688888554 47788999999887
No 129
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=99.68 E-value=3.8e-16 Score=162.06 Aligned_cols=195 Identities=18% Similarity=0.157 Sum_probs=134.6
Q ss_pred cccccEEEEEEecCCCC--------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEe
Q 002665 606 LRRRKYVFVIAADCDTT--------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFIC 677 (895)
Q Consensus 606 ~~~~~kli~~DiDGTL~--------~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~ 677 (895)
..++++++++|+||||+ .-+++.++++|+.|.++. ++.++|.|||+...+..+++-.++ ++||
T Consensus 14 ~~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~---~~~v~iiSGR~~~~l~~~~~v~~i------~l~a 84 (266)
T COG1877 14 LNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDP---RNVVAIISGRSLAELERLFGVPGI------GLIA 84 (266)
T ss_pred ccccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcC---CCeEEEEeCCCHHHHHHhcCCCCc------cEEE
Confidence 34899999999999993 457888999999999984 567999999999999999986666 6999
Q ss_pred CCCceEecCCCCCCCCCCCCcccCcchhhhhccccCcchHHHHHHHHhhhccCCCCccCcccccccccccceEEEEEecC
Q 002665 678 NSGSELYYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTN 757 (895)
Q Consensus 678 ~nGa~I~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 757 (895)
+||+++...++..... .....+..|...+ .+.++.+++++|+++.+.+ .+.+.||++.
T Consensus 85 ehGa~~r~~~g~~~~~--~~~~~~~~~~~~v-----~~~l~~~v~r~pGs~iE~K---------------~~a~~~Hyr~ 142 (266)
T COG1877 85 EHGAEVRDPNGKWWIN--LAEEADLRWLKEV-----AAILEYYVERTPGSYIERK---------------GFAVALHYRN 142 (266)
T ss_pred ecceEEecCCCCeeEe--cCHHHHhhHHHHH-----HHHHHHHhhcCCCeEEEEc---------------CcEEEEeecc
Confidence 9999997543111000 0111112232222 2356777888888887766 5678888876
Q ss_pred CCCCcCH-HHHHHHHHhhcCe-EEEEEeeCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCc
Q 002665 758 PQMIPPV-KELRKLMRIQALR-CHVIYCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGV 835 (895)
Q Consensus 758 ~~~~~~~-~~l~~~l~~~~~~-~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~a 835 (895)
.+..... ..+.......... ++++ .+...+|+.|.++|||.++++++++...+- .++.|.||+-+ | ++||+.+
T Consensus 143 a~~~~~~~~a~~~~~~~~~~~~~~v~--~gk~vVEvrp~~~~KG~a~~~i~~~~~~~~-~~~~~aGDD~T-D-E~~F~~v 217 (266)
T COG1877 143 AEDDEGAALALAEAATLINELKLRVT--PGKMVVELRPPGVSKGAAIKYIMDELPFDG-RFPIFAGDDLT-D-EDAFAAV 217 (266)
T ss_pred CCchhhHHHHHHHHHhccccccEEEE--eCceEEEEeeCCcchHHHHHHHHhcCCCCC-CcceecCCCCc-c-HHHHHhh
Confidence 5532211 1222222222111 4433 343489999999999999999999887664 45555777776 8 9999988
Q ss_pred c
Q 002665 836 H 836 (895)
Q Consensus 836 g 836 (895)
.
T Consensus 218 ~ 218 (266)
T COG1877 218 N 218 (266)
T ss_pred c
Confidence 6
No 130
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.67 E-value=2.9e-15 Score=168.57 Aligned_cols=249 Identities=16% Similarity=0.110 Sum_probs=162.6
Q ss_pred CCCcEEEeccC-CchHHHHHHhccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEe
Q 002665 146 IWPVAIHGHYA-DAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVIT 224 (895)
Q Consensus 146 ~~pDvIh~h~~-~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~ 224 (895)
.+||+||+|.. ...+++...++..++|++++.|+..... .+.. .. ..++ ...+.+|.+++
T Consensus 87 ~~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s~~------~~~~-----~~---~~r~-----~~~~~ad~~~~ 147 (363)
T cd03786 87 EKPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRSFD------RGMP-----DE---ENRH-----AIDKLSDLHFA 147 (363)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEecccccCC------CCCC-----ch---HHHH-----HHHHHhhhccC
Confidence 57999999964 4556677888888999998777542100 0110 00 1111 13567899999
Q ss_pred cCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCC-cCCCcccCCCCCCCcccccCCCCCCCCCch
Q 002665 225 STRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGI-EFHHIVRHNGDVDGEVERDEGSPASPDPPI 303 (895)
Q Consensus 225 ~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gi-d~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (895)
+|+...+.+.+ ++ ..+ .++.+++|++ |...+.+.....
T Consensus 148 ~s~~~~~~l~~-~G-~~~---------------------~kI~vign~v~d~~~~~~~~~~~------------------ 186 (363)
T cd03786 148 PTEEARRNLLQ-EG-EPP---------------------ERIFVVGNTMIDALLRLLELAKK------------------ 186 (363)
T ss_pred CCHHHHHHHHH-cC-CCc---------------------ccEEEECchHHHHHHHHHHhhcc------------------
Confidence 99977665432 22 222 2899999985 544332211000
Q ss_pred hhhhhhccCCCCCcEEEEEeCCCC---CCCHHHHHHHHHhcccccCCCcEEEEE-ecCCCchhhhhhhHHHHHHHHHHHH
Q 002665 304 WSEIMHFFSNPRKPMILALARPDP---KKNITTLVKAFGECRPLRELANLTLIM-GNRDDIDEMSGTNAALLLSILKLID 379 (895)
Q Consensus 304 ~~~~~~~~~~~~~~~Il~vgrl~~---~Kgi~~ll~A~~~l~~~~~~~~l~liv-G~~~~~~~l~~~~~~~~~~i~~~~~ 379 (895)
...+..++.+++..++++.+|+.. .||++.+++|+..+.. . ++.+++ |++... ..+.+.+.
T Consensus 187 ~~~~~~~~~~~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~--~--~~~vi~~~~~~~~-----------~~l~~~~~ 251 (363)
T cd03786 187 ELILELLGLLPKKYILVTLHRVENVDDGEQLEEILEALAELAE--E--DVPVVFPNHPRTR-----------PRIREAGL 251 (363)
T ss_pred chhhhhcccCCCCEEEEEeCCccccCChHHHHHHHHHHHHHHh--c--CCEEEEECCCChH-----------HHHHHHHH
Confidence 001122333344556778898775 7999999999998842 1 454444 333221 33445556
Q ss_pred HcCC-CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCC-CCcccccccCCceEEeC
Q 002665 380 KYDL-YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN-GGPVDIHRVLDNGLLVD 457 (895)
Q Consensus 380 ~~~l-~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~-gg~~eiv~~~~~g~lv~ 457 (895)
+++. .+++.|.+..+.+++..+|+.| |++|.+|- | +..||+++|+|+|.+.. +..+++++ +|+.+.
T Consensus 252 ~~~~~~~~v~~~~~~~~~~~~~l~~~a----d~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~---~g~~~~ 319 (363)
T cd03786 252 EFLGHHPNVLLISPLGYLYFLLLLKNA----DLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVE---SGTNVL 319 (363)
T ss_pred hhccCCCCEEEECCcCHHHHHHHHHcC----cEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhh---eeeEEe
Confidence 6665 5689999988888999999999 99999873 4 47899999999999974 44566664 343333
Q ss_pred C-CCHHHHHHHHHHHhhCHHHHHHH
Q 002665 458 P-HDQQSIADALLKLVSDKQLWERC 481 (895)
Q Consensus 458 p-~d~~~la~ai~~ll~~~~~~~~~ 481 (895)
. .|+++++++|.++++++..+..+
T Consensus 320 ~~~~~~~i~~~i~~ll~~~~~~~~~ 344 (363)
T cd03786 320 VGTDPEAILAAIEKLLSDEFAYSLM 344 (363)
T ss_pred cCCCHHHHHHHHHHHhcCchhhhcC
Confidence 3 37999999999999988766554
No 131
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=99.58 E-value=1.8e-13 Score=153.39 Aligned_cols=326 Identities=20% Similarity=0.271 Sum_probs=183.4
Q ss_pred CcEEEeccCCchHHHHHHhcc-CCCCEEEEeCCCchhhHHHHHHhCC---------CChhhhhhHhhHHHhHHHHHhhcc
Q 002665 148 PVAIHGHYADAGDAAALLSGA-LNVPMVFTGHSLGRDKLEQLLKQGR---------LSRDEINTTYKIMRRIEAEELSLD 217 (895)
Q Consensus 148 pDvIh~h~~~~~~~~~~~~~~-~~ip~v~t~H~~~~~~~~~~~~~g~---------~~~~~~~~~~~~~~r~~~e~~~~~ 217 (895)
.=|.|+|.|.+|...+.+.++ ..+..|||.|..-.-+ .+..+. +..+.....+.+..+...|+.+.+
T Consensus 144 ~ViaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR---~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~ 220 (633)
T PF05693_consen 144 KVIAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGR---YLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAH 220 (633)
T ss_dssp EEEEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHH---HHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHH
T ss_pred cEEEEechHhHhHHHHHHhccCCCeeEEEEecccchhh---HhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHH
Confidence 456699999887766555443 4678899999763322 222111 112223334556677778999999
Q ss_pred ccCEEEecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCC
Q 002665 218 ASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPA 297 (895)
Q Consensus 218 ~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~ 297 (895)
.||.+.++|+-...+...+.+. . .=.|+|||++.++|.... +. +++++
T Consensus 221 ~AdvFTTVSeITa~Ea~~LL~r-~-----------------------pDvV~pNGl~v~~~~~~~-ef----qnl~~--- 268 (633)
T PF05693_consen 221 YADVFTTVSEITAKEAEHLLKR-K-----------------------PDVVTPNGLNVDKFPALH-EF----QNLHA--- 268 (633)
T ss_dssp HSSEEEESSHHHHHHHHHHHSS--------------------------SEE----B-GGGTSSTT-HH----HHHHH---
T ss_pred hcCeeeehhhhHHHHHHHHhCC-C-----------------------CCEEcCCCccccccccch-HH----HHHHH---
Confidence 9999999999877776555443 1 237899999998875432 00 00000
Q ss_pred CCCCchhhhhhh-cc----CCCC-CcEEEEEeCCC-CCCCHHHHHHHHHhcccc----cCCCcEE-EEE-----------
Q 002665 298 SPDPPIWSEIMH-FF----SNPR-KPMILALARPD-PKKNITTLVKAFGECRPL----RELANLT-LIM----------- 354 (895)
Q Consensus 298 ~~~~~~~~~~~~-~~----~~~~-~~~Il~vgrl~-~~Kgi~~ll~A~~~l~~~----~~~~~l~-liv----------- 354 (895)
.....+.+..+. |. .+++ ..+|...||.. ..||++.+|+|+.+|... .....++ +|+
T Consensus 269 ~~k~ki~~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~ve 348 (633)
T PF05693_consen 269 KAKEKIHEFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFNVE 348 (633)
T ss_dssp HHHHHHHHHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-HH
T ss_pred HHHHHHHHHHHHHhcccCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcCHH
Confidence 001112222222 21 1223 45678889998 559999999999998432 1122232 332
Q ss_pred --------------------------------ecCCCchhhhhhhHHH--------------------------HHHHHH
Q 002665 355 --------------------------------GNRDDIDEMSGTNAAL--------------------------LLSILK 376 (895)
Q Consensus 355 --------------------------------G~~~~~~~l~~~~~~~--------------------------~~~i~~ 376 (895)
|..++.+++-...+.+ ...|..
T Consensus 349 ~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn 428 (633)
T PF05693_consen 349 SLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILN 428 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHH
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHH
Confidence 2222222221111111 122334
Q ss_pred HHHHcCCCC----C--EEe-CCCCCCC------cHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCc
Q 002665 377 LIDKYDLYG----Q--VAY-PKHHKQS------DVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGP 443 (895)
Q Consensus 377 ~~~~~~l~~----~--v~~-~g~~~~~------el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~ 443 (895)
.+.++++.+ + |.| +-+++.. +..++.+.| |+.|+||++||+|.+.+|+.|+|+|.|.|+..|.
T Consensus 429 ~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~Gc----dLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGF 504 (633)
T PF05693_consen 429 MIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGC----DLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGF 504 (633)
T ss_dssp HHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHHS----SEEEE--SSBSS-HHHHHHHHTT--EEEETTBHH
T ss_pred HHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhccC----ceeeeccccccccCChHHHhhcCCceeeccchhH
Confidence 444444422 2 223 3333333 688899999 9999999999999999999999999999998776
Q ss_pred cccccc-----CCceEEe-CC--CCH----HHHHHHHHHHhh-CHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhhh
Q 002665 444 VDIHRV-----LDNGLLV-DP--HDQ----QSIADALLKLVS-DKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQ 510 (895)
Q Consensus 444 ~eiv~~-----~~~g~lv-~p--~d~----~~la~ai~~ll~-~~~~~~~~~~~~~~~v~~~s~~~~a~~~~~~l~~~~~ 510 (895)
...+.+ ...|+.| +- .+. +++++.|..... ++.++..+++++.+..+..+|+.....|.+.+...++
T Consensus 505 G~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay~~AL~ 584 (633)
T PF05693_consen 505 GCWMQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAYDLALR 584 (633)
T ss_dssp HHHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 654432 3356655 32 234 455555555555 6777778888887777899999999999999988776
Q ss_pred cC
Q 002665 511 RQ 512 (895)
Q Consensus 511 ~~ 512 (895)
+.
T Consensus 585 ~a 586 (633)
T PF05693_consen 585 RA 586 (633)
T ss_dssp HH
T ss_pred hc
Confidence 53
No 132
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=99.55 E-value=7.2e-13 Score=157.32 Aligned_cols=187 Identities=17% Similarity=0.200 Sum_probs=148.8
Q ss_pred CCCCCcEEEEEeCCCCCCCHHHHHHHHHhccccc--CCCcEEE-EEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEE
Q 002665 312 SNPRKPMILALARPDPKKNITTLVKAFGECRPLR--ELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVA 388 (895)
Q Consensus 312 ~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~--~~~~l~l-ivG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~ 388 (895)
.+|+.++|+++.|+...|+.++++..++++.++- +...+++ ++|...-.+.. ..++...|..+.++....++|.
T Consensus 474 ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP~d~~---gK~iIk~i~~~a~~p~~~~kVv 550 (778)
T cd04299 474 LDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHPADEP---GKELIQEIVEFSRRPEFRGRIV 550 (778)
T ss_pred cCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCccchH---HHHHHHHHHHHHhCcCCCCcEE
Confidence 4567789999999999999999999988885422 2223554 55665433222 3457778888888777778888
Q ss_pred eCCCCCCCcHHHHHHHhhcCCcEEEecCC--CCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCC--------
Q 002665 389 YPKHHKQSDVPDIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDP-------- 458 (895)
Q Consensus 389 ~~g~~~~~el~~ly~~a~~~~Dv~v~ps~--~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p-------- 458 (895)
|+...+-.--..++..| ||+++||+ .|+.|++-+=||.-|.+-+++..|...|.- ++.+|+.+.+
T Consensus 551 fle~Yd~~lA~~LvaG~----DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~~~~~~~~~ 625 (778)
T cd04299 551 FLEDYDMALARHLVQGV----DVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGDGDEYEDDE 625 (778)
T ss_pred EEcCCCHHHHHHHHhhh----hhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCCCccccChh
Confidence 88776555555667777 99999999 999999999999999999999999999987 6789999987
Q ss_pred ----CCHHHHHHHHHHHhh----C------HHHHHHHHHHHHHHH-hhCCHHHHHHHHHHHHH
Q 002665 459 ----HDQQSIADALLKLVS----D------KQLWERCRQNGLKNI-HQFSWPEHCKSYLSRIS 506 (895)
Q Consensus 459 ----~d~~~la~ai~~ll~----~------~~~~~~~~~~~~~~v-~~~s~~~~a~~~~~~l~ 506 (895)
.|.+++.+.|++.+- + |..|.++++++.+.+ ..|||..++++|.+.+-
T Consensus 626 ~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y 688 (778)
T cd04299 626 YQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFY 688 (778)
T ss_pred hcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhH
Confidence 567778888865443 2 678999999999888 69999999999998876
No 133
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=99.50 E-value=6.9e-13 Score=153.32 Aligned_cols=167 Identities=13% Similarity=0.171 Sum_probs=138.2
Q ss_pred EEEEEe--CCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCC-----------
Q 002665 318 MILALA--RPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLY----------- 384 (895)
Q Consensus 318 ~Il~vg--rl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~----------- 384 (895)
.+++++ |+ +.|.++.+|+|+.++.+..|...+. +.|.+.. ..+ ...++++++++++.
T Consensus 321 ~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~-~~gy~~~-~~~-------~~~l~~~i~~~~~~~~~~~~~~~~~ 390 (519)
T TIGR03713 321 TEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELK-ILTYNND-NDI-------TQLLEDILEQINEEYNQDKNFFSLS 390 (519)
T ss_pred eEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEE-EEEecCc-hhH-------HHHHHHHHHHHHhhhchhhhccccc
Confidence 455666 99 9999999999999997655554443 3665543 111 23333444444333
Q ss_pred ------------------CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccc
Q 002665 385 ------------------GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDI 446 (895)
Q Consensus 385 ------------------~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~ei 446 (895)
.+|.|.|..+..++...|..+ .++|.+|..||++ +.+||+++|+|+| .-|+.++
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~a----rl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~~~ 462 (519)
T TIGR03713 391 EQDENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKL----RLIIDLSKEPDLY-TQISGISAGIPQI---NKVETDY 462 (519)
T ss_pred hhhhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhh----eEEEECCCCCChH-HHHHHHHcCCCee---ecCCcee
Confidence 689999998777999999999 9999999999999 9999999999999 5567899
Q ss_pred cccCCceEEeCCCCHHHHHHHHHHHhhCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHH
Q 002665 447 HRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSR 504 (895)
Q Consensus 447 v~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~v~~~s~~~~a~~~~~~ 504 (895)
|.++.||+++ +|..+++++|..+|.+++.|.++...+.+.+++||-+.+++++.++
T Consensus 463 V~d~~NG~li--~d~~~l~~al~~~L~~~~~wn~~~~~sy~~~~~yS~~~i~~kW~~~ 518 (519)
T TIGR03713 463 VEHNKNGYII--DDISELLKALDYYLDNLKNWNYSLAYSIKLIDDYSSENIIERLNEL 518 (519)
T ss_pred eEcCCCcEEe--CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHHHhh
Confidence 9999999999 5999999999999999999999999999999999999999888764
No 134
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.40 E-value=3.3e-11 Score=135.91 Aligned_cols=327 Identities=13% Similarity=-0.008 Sum_probs=181.9
Q ss_pred CCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhhcccCCCCCcEEEEecCCCCCccc
Q 002665 30 DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYV 109 (895)
Q Consensus 30 ~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~g~~i~r~~~~~~~~~l 109 (895)
.|||...-. .|+++|.+++ ++|.++.... +.. +.. ....++.+..++..+.
T Consensus 14 gtsGhi~pa-al~~~l~~~~--~~~~~~g~gg--~~m--------~~~------------g~~~~~~~~~l~v~G~---- 64 (385)
T TIGR00215 14 EASGDILGA-GLRQQLKEHY--PNARFIGVAG--PRM--------AAE------------GCEVLYSMEELSVMGL---- 64 (385)
T ss_pred CccHHHHHH-HHHHHHHhcC--CCcEEEEEcc--HHH--------HhC------------cCccccChHHhhhccH----
Confidence 489998777 9999999987 8898887531 110 000 0000122222221111
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCC-chHHHHHHhccCCCCEEEEeCCCchhhHHHH
Q 002665 110 QKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYAD-AGDAAALLSGALNVPMVFTGHSLGRDKLEQL 188 (895)
Q Consensus 110 ~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~-~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~ 188 (895)
+. .......+++.+.+..+.+++ .+||+|+++... ........++.+|+|++++.. . +. |
T Consensus 65 -----~~-~l~~~~~~~~~~~~~~~~l~~-------~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i~-P--~~---w 125 (385)
T TIGR00215 65 -----RE-VLGRLGRLLKIRKEVVQLAKQ-------AKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYIS-P--QV---W 125 (385)
T ss_pred -----HH-HHHHHHHHHHHHHHHHHHHHh-------cCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEeC-C--cH---h
Confidence 00 011122333444444444444 679999998752 233344577788999997652 1 11 0
Q ss_pred HHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEE
Q 002665 189 LKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVV 268 (895)
Q Consensus 189 ~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~v 268 (895)
.-.+. . -+...+.+|.|++.++.+.+.+ ..+.. ++.+
T Consensus 126 aw~~~--------~---------~r~l~~~~d~v~~~~~~e~~~~-~~~g~-------------------------~~~~ 162 (385)
T TIGR00215 126 AWRKW--------R---------AKKIEKATDFLLAILPFEKAFY-QKKNV-------------------------PCRF 162 (385)
T ss_pred hcCcc--------h---------HHHHHHHHhHhhccCCCcHHHH-HhcCC-------------------------CEEE
Confidence 00000 0 1223568899999998765443 22211 5566
Q ss_pred eCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEE--eCCCC-CCCHHHHHHHHHhccccc
Q 002665 269 IPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILAL--ARPDP-KKNITTLVKAFGECRPLR 345 (895)
Q Consensus 269 ip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~v--grl~~-~Kgi~~ll~A~~~l~~~~ 345 (895)
+.|++-...... . +.....++++..++++++|+.+ +|..+ .|++..+++|+..+.+..
T Consensus 163 vGnPv~~~~~~~-~------------------~~~~~~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~ 223 (385)
T TIGR00215 163 VGHPLLDAIPLY-K------------------PDRKSAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQE 223 (385)
T ss_pred ECCchhhhcccc-C------------------CCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhC
Confidence 777663221100 0 0011223345556677877665 37666 689999999999886433
Q ss_pred CCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHH
Q 002665 346 ELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTL 425 (895)
Q Consensus 346 ~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~ 425 (895)
++.++++.+++.... ..+......+++...+.++.. +...+|+.| |++|.+| |.+.
T Consensus 224 p~~~~vi~~~~~~~~-----------~~~~~~~~~~~~~~~v~~~~~----~~~~~l~aA----Dl~V~~S-----Gt~t 279 (385)
T TIGR00215 224 PDLRRVLPVVNFKRR-----------LQFEQIKAEYGPDLQLHLIDG----DARKAMFAA----DAALLAS-----GTAA 279 (385)
T ss_pred CCeEEEEEeCCchhH-----------HHHHHHHHHhCCCCcEEEECc----hHHHHHHhC----CEEeecC-----CHHH
Confidence 333333333443221 122233344544445555433 567899999 9999998 7777
Q ss_pred HHHHHcCCCEEEcC-CCCc----------------ccccccCCce-EEe-CCCCHHHHHHHHHHHhhCH----HHHHHHH
Q 002665 426 IEAAAYGLPIVATK-NGGP----------------VDIHRVLDNG-LLV-DPHDQQSIADALLKLVSDK----QLWERCR 482 (895)
Q Consensus 426 ~Ea~a~G~PVvat~-~gg~----------------~eiv~~~~~g-~lv-~p~d~~~la~ai~~ll~~~----~~~~~~~ 482 (895)
+|+|++|+|+|... .... ..++.+..-. .++ +--+++.+++.+.++++|+ +.++++.
T Consensus 280 lEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~ 359 (385)
T TIGR00215 280 LEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENGLKAYKEMHRER 359 (385)
T ss_pred HHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCCcccHHHHHHHH
Confidence 79999999988872 1111 1112211111 111 2347899999999999998 8777776
Q ss_pred HHHHHHHh
Q 002665 483 QNGLKNIH 490 (895)
Q Consensus 483 ~~~~~~v~ 490 (895)
+...+..+
T Consensus 360 ~~~~~~~~ 367 (385)
T TIGR00215 360 QFFEELRQ 367 (385)
T ss_pred HHHHHHHH
Confidence 66655543
No 135
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=99.40 E-value=2.6e-13 Score=129.53 Aligned_cols=131 Identities=30% Similarity=0.441 Sum_probs=92.5
Q ss_pred CcEEEEEeCCCCCCCHHHHHH-HHHhcccccCCCcEEE-EEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCC
Q 002665 316 KPMILALARPDPKKNITTLVK-AFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHH 393 (895)
Q Consensus 316 ~~~Il~vgrl~~~Kgi~~ll~-A~~~l~~~~~~~~l~l-ivG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~ 393 (895)
-++|+++|++...|+++.+++ ++.++.+..+ ++.+ ++|.+++ +++ ++ ..++|.|.|++
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p--~~~l~i~G~~~~--~l~---------------~~-~~~~v~~~g~~ 61 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHP--DIELIIIGNGPD--ELK---------------RL-RRPNVRFHGFV 61 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHST--TEEEEEECESS---HHC---------------CH-HHCTEEEE-S-
T ss_pred cccccccccccccccccchhhhHHHHHHHHCc--CEEEEEEeCCHH--HHH---------------Hh-cCCCEEEcCCH
Confidence 367999999999999999999 9999975444 4554 6777653 122 11 23589999998
Q ss_pred CCCcHHHHHHHhhcCCcEEEecCC-CCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHh
Q 002665 394 KQSDVPDIYRLAAKTKGVFINPAF-IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLV 472 (895)
Q Consensus 394 ~~~el~~ly~~a~~~~Dv~v~ps~-~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll 472 (895)
+++.++|+.| |++++|+. .++++.+++|||++|+|||+++. +..+++.....|+++ ++|+++++++|.+++
T Consensus 62 --~e~~~~l~~~----dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~~i~~l~ 133 (135)
T PF13692_consen 62 --EELPEILAAA----DVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-ANDPEELAEAIERLL 133 (135)
T ss_dssp --HHHHHHHHC-----SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT-HHHHHHHHHHHH
T ss_pred --HHHHHHHHhC----CEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCCHHHHHHHHHHHh
Confidence 5899999999 99999985 67899999999999999999999 566676656678787 889999999999998
Q ss_pred hC
Q 002665 473 SD 474 (895)
Q Consensus 473 ~~ 474 (895)
+|
T Consensus 134 ~d 135 (135)
T PF13692_consen 134 ND 135 (135)
T ss_dssp H-
T ss_pred cC
Confidence 65
No 136
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.38 E-value=2.9e-10 Score=126.57 Aligned_cols=308 Identities=9% Similarity=0.099 Sum_probs=179.0
Q ss_pred CCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhhcccCCCCCcEEEEecCCCCCcccc
Q 002665 31 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQ 110 (895)
Q Consensus 31 ~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~g~~i~r~~~~~~~~~l~ 110 (895)
|||+..-.+-++++|.++| |+|.++++.. +...+.+ ...|+.++.++..+. +
T Consensus 11 TGGHi~Pala~a~~l~~~g--~~v~~vg~~~---------~~e~~l~-------------~~~g~~~~~~~~~~l----~ 62 (352)
T PRK12446 11 SAGHVTPNLAIIPYLKEDN--WDISYIGSHQ---------GIEKTII-------------EKENIPYYSISSGKL----R 62 (352)
T ss_pred cHHHHHHHHHHHHHHHhCC--CEEEEEECCC---------ccccccC-------------cccCCcEEEEeccCc----C
Confidence 9999999999999999998 9999998752 1111111 112566666664322 1
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHHhccCCCCEEEEeCCCchhhHHHHHH
Q 002665 111 KELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLK 190 (895)
Q Consensus 111 k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~ 190 (895)
+...+. ...+...+.....+..+.+++ .+||+||++....+..+...++.+++|++++-.+..+..
T Consensus 63 ~~~~~~-~~~~~~~~~~~~~~~~~i~~~-------~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~~~g~------ 128 (352)
T PRK12446 63 RYFDLK-NIKDPFLVMKGVMDAYVRIRK-------LKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMTPGL------ 128 (352)
T ss_pred CCchHH-HHHHHHHHHHHHHHHHHHHHh-------cCCCEEEecCchhhHHHHHHHHHcCCCEEEECCCCCccH------
Confidence 111111 112223333444444444554 789999998776776778888899999988666542211
Q ss_pred hCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeC
Q 002665 191 QGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIP 270 (895)
Q Consensus 191 ~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip 270 (895)
. .+...+.|+.|++.-++... .++ + .++.+..
T Consensus 129 -----------~---------nr~~~~~a~~v~~~f~~~~~----~~~---~---------------------~k~~~tG 160 (352)
T PRK12446 129 -----------A---------NKIALRFASKIFVTFEEAAK----HLP---K---------------------EKVIYTG 160 (352)
T ss_pred -----------H---------HHHHHHhhCEEEEEccchhh----hCC---C---------------------CCeEEEC
Confidence 1 11235678888775542211 111 1 1666666
Q ss_pred CCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCCCCCCCHHHH-HHHHHhcccccCCCc
Q 002665 271 PGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTL-VKAFGECRPLRELAN 349 (895)
Q Consensus 271 ~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~l-l~A~~~l~~~~~~~~ 349 (895)
|.|..+..... .....+.+...+++++||.+|.=-..+.+..+ .+++..+. ...+
T Consensus 161 ~Pvr~~~~~~~---------------------~~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~---~~~~ 216 (352)
T PRK12446 161 SPVREEVLKGN---------------------REKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELL---LKYQ 216 (352)
T ss_pred CcCCccccccc---------------------chHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHHHhhc---cCcE
Confidence 66654332110 01122234445678888888764444555333 33444442 2345
Q ss_pred EEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHH
Q 002665 350 LTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAA 429 (895)
Q Consensus 350 l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~ 429 (895)
++.++|... +++. + ..+ ..+...+++ .++++++|..| |++|. -+-+.++.|++
T Consensus 217 vv~~~G~~~-~~~~----------~----~~~---~~~~~~~f~-~~~m~~~~~~a----dlvIs----r~G~~t~~E~~ 269 (352)
T PRK12446 217 IVHLCGKGN-LDDS----------L----QNK---EGYRQFEYV-HGELPDILAIT----DFVIS----RAGSNAIFEFL 269 (352)
T ss_pred EEEEeCCch-HHHH----------H----hhc---CCcEEecch-hhhHHHHHHhC----CEEEE----CCChhHHHHHH
Confidence 544666542 2211 1 111 122333442 26799999999 99884 56789999999
Q ss_pred HcCCCEEEcCCC-----C----cccccccCCceEEeCCC--CHHHHHHHHHHHhhCHHHHH
Q 002665 430 AYGLPIVATKNG-----G----PVDIHRVLDNGLLVDPH--DQQSIADALLKLVSDKQLWE 479 (895)
Q Consensus 430 a~G~PVvat~~g-----g----~~eiv~~~~~g~lv~p~--d~~~la~ai~~ll~~~~~~~ 479 (895)
++|+|.|.-... + ..+.+.+.+.|..+... +++.+.++|.++++|++.++
T Consensus 270 ~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~~~~~~~ 330 (352)
T PRK12446 270 TLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELSHNNEKYK 330 (352)
T ss_pred HcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHcCHHHHH
Confidence 999999987542 1 11233344456665433 57899999999998887643
No 137
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.37 E-value=5.9e-10 Score=122.68 Aligned_cols=334 Identities=17% Similarity=0.151 Sum_probs=204.0
Q ss_pred CCchhhHHHHHHHHHhcCCCcce-EEEeeccccCCCCCCCCCccccccccccchhhhcccCCCCCcEEEEecCCCCCccc
Q 002665 31 TGGQVKYVVELARALGSMPGVYR-VDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYV 109 (895)
Q Consensus 31 ~GG~~~~v~~La~~L~~~g~~~~-V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~g~~i~r~~~~~~~~~l 109 (895)
|||+.....-++++|.++| ++ |.++.... ...+.+ +.. .++.++.++.++..++
T Consensus 10 TGGHv~pAlAl~~~l~~~g--~~~v~~~~~~~----------~~e~~l-----------~~~-~~~~~~~I~~~~~~~~- 64 (357)
T COG0707 10 TGGHVFPALALAEELAKRG--WEQVIVLGTGD----------GLEAFL-----------VKQ-YGIEFELIPSGGLRRK- 64 (357)
T ss_pred CccchhHHHHHHHHHHhhC--ccEEEEecccc----------cceeee-----------ccc-cCceEEEEeccccccc-
Confidence 9999999999999999999 74 66653320 011111 111 2778888887654222
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHHhccCCCCEEEEeCCCchhhHHHHH
Q 002665 110 QKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLL 189 (895)
Q Consensus 110 ~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~ 189 (895)
..+. ...-...++..+.+..+.+++ .+||+|.+........+...++..++|++++-.+..+-..
T Consensus 65 ---~~~~-~~~~~~~~~~~~~~a~~il~~-------~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~~G~a---- 129 (357)
T COG0707 65 ---GSLK-LLKAPFKLLKGVLQARKILKK-------LKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAVPGLA---- 129 (357)
T ss_pred ---CcHH-HHHHHHHHHHHHHHHHHHHHH-------cCCCEEEecCCccccHHHHHHHhCCCCEEEEecCCCcchh----
Confidence 2222 111123445555566666666 7899999988777777778888889999999888744221
Q ss_pred HhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEe
Q 002665 190 KQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVI 269 (895)
Q Consensus 190 ~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vi 269 (895)
+++ ..+.|+.|.+.-+. ... +. .+ .++.+.
T Consensus 130 -------------nk~---------~~~~a~~V~~~f~~-~~~----~~--~~---------------------~~~~~t 159 (357)
T COG0707 130 -------------NKI---------LSKFAKKVASAFPK-LEA----GV--KP---------------------ENVVVT 159 (357)
T ss_pred -------------HHH---------hHHhhceeeecccc-ccc----cC--CC---------------------CceEEe
Confidence 111 24456666664432 111 11 11 156677
Q ss_pred CCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc
Q 002665 270 PPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELAN 349 (895)
Q Consensus 270 p~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~ 349 (895)
.+.|..+.+. .. .. .. ++....++++||.+|.=-..+.+..++......+ ....+
T Consensus 160 G~Pvr~~~~~-~~-~~--------------------~~-~~~~~~~~~~ilV~GGS~Ga~~ln~~v~~~~~~l--~~~~~ 214 (357)
T COG0707 160 GIPVRPEFEE-LP-AA--------------------EV-RKDGRLDKKTILVTGGSQGAKALNDLVPEALAKL--ANRIQ 214 (357)
T ss_pred cCcccHHhhc-cc-hh--------------------hh-hhhccCCCcEEEEECCcchhHHHHHHHHHHHHHh--hhCeE
Confidence 7777655443 11 00 00 1111126888888886333333444443333221 12233
Q ss_pred EEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHH
Q 002665 350 LTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAA 429 (895)
Q Consensus 350 l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~ 429 (895)
+...+|... + .++...+..++. +...++ .+++.++|+.| |+++. -+-++++.|.+
T Consensus 215 v~~~~G~~~-~-----------~~~~~~~~~~~~---~~v~~f--~~dm~~~~~~A----DLvIs----RaGa~Ti~E~~ 269 (357)
T COG0707 215 VIHQTGKND-L-----------EELKSAYNELGV---VRVLPF--IDDMAALLAAA----DLVIS----RAGALTIAELL 269 (357)
T ss_pred EEEEcCcch-H-----------HHHHHHHhhcCc---EEEeeH--HhhHHHHHHhc----cEEEe----CCcccHHHHHH
Confidence 323445433 2 223344444444 666666 47899999999 99884 56789999999
Q ss_pred HcCCCEEEcCCCCc--------ccccccCCceEEeCCCC--HHHHHHHHHHHhhCHHHHHHHHHHHHHHHhhCCHHHHHH
Q 002665 430 AYGLPIVATKNGGP--------VDIHRVLDNGLLVDPHD--QQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCK 499 (895)
Q Consensus 430 a~G~PVvat~~gg~--------~eiv~~~~~g~lv~p~d--~~~la~ai~~ll~~~~~~~~~~~~~~~~v~~~s~~~~a~ 499 (895)
++|+|.|.-..+.. +..+++.+.|.++.-.+ ++.+.+.|.+++++++..++|.+++++....-..+.+++
T Consensus 270 a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~~~~l~~m~~~a~~~~~p~aa~~i~~ 349 (357)
T COG0707 270 ALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLLSNPEKLKAMAENAKKLGKPDAAERIAD 349 (357)
T ss_pred HhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 99999998764332 23344556677776555 889999999999999999999999988776655555555
Q ss_pred HHHHH
Q 002665 500 SYLSR 504 (895)
Q Consensus 500 ~~~~~ 504 (895)
..+..
T Consensus 350 ~~~~~ 354 (357)
T COG0707 350 LLLAL 354 (357)
T ss_pred HHHHH
Confidence 54443
No 138
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=99.37 E-value=3.9e-12 Score=126.72 Aligned_cols=169 Identities=21% Similarity=0.270 Sum_probs=87.4
Q ss_pred CCCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhhcccCCCCCcEEEEecCCCCCcc
Q 002665 29 SDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKY 108 (895)
Q Consensus 29 ~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~g~~i~r~~~~~~~~~ 108 (895)
+..||+++++.+|+++|+++| |+|+++|....++.... . .......+....
T Consensus 9 ~~~GG~e~~~~~l~~~l~~~G--~~v~v~~~~~~~~~~~~--------~----------------~~~~~~~~~~~~--- 59 (177)
T PF13439_consen 9 PNIGGAERVVLNLARALAKRG--HEVTVVSPGVKDPIEEE--------L----------------VKIFVKIPYPIR--- 59 (177)
T ss_dssp TSSSHHHHHHHHHHHHHHHTT---EEEEEESS-TTS-SST--------E----------------EEE---TT-SST---
T ss_pred CCCChHHHHHHHHHHHHHHCC--CEEEEEEcCCCccchhh--------c----------------cceeeeeecccc---
Confidence 679999999999999999999 99999988643221100 0 011111111000
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHHhccCCCCEEEEeCCCchhhHHHH
Q 002665 109 VQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQL 188 (895)
Q Consensus 109 l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~ 188 (895)
+ ... ........+.+.+.+ .+|||||+|.+.....+..... ++|++++.|+.+... .
T Consensus 60 --~----~~~-----~~~~~~~~~~~~i~~-------~~~DiVh~~~~~~~~~~~~~~~--~~~~v~~~H~~~~~~---~ 116 (177)
T PF13439_consen 60 --K----RFL-----RSFFFMRRLRRLIKK-------EKPDIVHIHGPPAFWIALLACR--KVPIVYTIHGPYFER---R 116 (177)
T ss_dssp --S----S-------HHHHHHHHHHHHHHH-------HT-SEEECCTTHCCCHHHHHHH--CSCEEEEE-HHH--H---H
T ss_pred --c----ccc-----hhHHHHHHHHHHHHH-------cCCCeEEecccchhHHHHHhcc--CCCEEEEeCCCcccc---c
Confidence 0 000 111222233333333 4699999998744433333333 999999999875320 0
Q ss_pred HHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEE
Q 002665 189 LKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVV 268 (895)
Q Consensus 189 ~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~v 268 (895)
.... .. .....+..++ +....+.+|.++++|+...+++.+ |+.. +. ++.|
T Consensus 117 ~~~~--~~---~~~~~~~~~~--~~~~~~~~~~ii~vS~~~~~~l~~-~~~~-~~---------------------ki~v 166 (177)
T PF13439_consen 117 FLKS--KL---SPYSYLNFRI--ERKLYKKADRIIAVSESTKDELIK-FGIP-PE---------------------KIHV 166 (177)
T ss_dssp TTTT--SC---CCHHHHHHCT--THHHHCCSSEEEESSHHHHHHHHH-HT---SS----------------------EEE
T ss_pred cccc--cc---chhhhhhhhh--hhhHHhcCCEEEEECHHHHHHHHH-hCCc-cc---------------------CCEE
Confidence 0000 00 0011111111 334478999999999998888776 6532 22 8999
Q ss_pred eCCCCcCCCcc
Q 002665 269 IPPGIEFHHIV 279 (895)
Q Consensus 269 ip~Gid~~~f~ 279 (895)
||||||++.|.
T Consensus 167 I~ngid~~~F~ 177 (177)
T PF13439_consen 167 IYNGIDTDRFR 177 (177)
T ss_dssp ----B-CCCH-
T ss_pred EECCccHHHcC
Confidence 99999999873
No 139
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=99.37 E-value=1.7e-12 Score=126.91 Aligned_cols=160 Identities=28% Similarity=0.339 Sum_probs=88.1
Q ss_pred CchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhhcccCCCCCcEEEEecCCCCCccccc
Q 002665 32 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQK 111 (895)
Q Consensus 32 GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~g~~i~r~~~~~~~~~l~k 111 (895)
||+++++.+|+++|+++| |+|+|+|...... ..+ ...++++++++|..+.. . .
T Consensus 1 GG~~~~~~~l~~~L~~~G--~~V~v~~~~~~~~--------~~~--------------~~~~~~~~~~~~~~~~~-~--~ 53 (160)
T PF13579_consen 1 GGIERYVRELARALAARG--HEVTVVTPQPDPE--------DDE--------------EEEDGVRVHRLPLPRRP-W--P 53 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT---EEEEEEE---GG--------G-S--------------EEETTEEEEEE--S-SS-S--G
T ss_pred CCHHHHHHHHHHHHHHCC--CEEEEEecCCCCc--------ccc--------------cccCCceEEeccCCccc-h--h
Confidence 899999999999999999 9999999763211 000 01258999999876542 1 0
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHHhccCCCCEEEEeCCCchhhHHHHHHh
Q 002665 112 ELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQ 191 (895)
Q Consensus 112 ~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~ 191 (895)
...+ .+...+.+++ ..+ ..+||+||+|.+..+.++..+++..++|+|++.|+.......
T Consensus 54 ~~~~----~~~~~~~~~l-----~~~-------~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~----- 112 (160)
T PF13579_consen 54 LRLL----RFLRRLRRLL-----AAR-------RERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLFRRGS----- 112 (160)
T ss_dssp GGHC----CHHHHHHHHC-----HHC-------T---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T----------
T ss_pred hhhH----HHHHHHHHHH-----hhh-------ccCCeEEEecccchhHHHHHHHHccCCcEEEEECCCchhhcc-----
Confidence 0011 1222222222 001 257999999997666666666657799999999986432210
Q ss_pred CCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCC
Q 002665 192 GRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPP 271 (895)
Q Consensus 192 g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~ 271 (895)
....++.++ .|+..++.||.+++.|+...+.+.+ ++. .+. ++.||||
T Consensus 113 --------~~~~~~~~~--~~~~~~~~ad~vi~~S~~~~~~l~~-~g~-~~~---------------------ri~vipn 159 (160)
T PF13579_consen 113 --------RWKRRLYRW--LERRLLRRADRVIVVSEAMRRYLRR-YGV-PPD---------------------RIHVIPN 159 (160)
T ss_dssp ---------HHHHHHHH--HHHHHHHH-SEEEESSHHHHHHHHH-H----GG---------------------GEEE---
T ss_pred --------chhhHHHHH--HHHHHHhcCCEEEECCHHHHHHHHH-hCC-CCC---------------------cEEEeCc
Confidence 111222333 3778899999999999988887766 543 333 9999999
Q ss_pred C
Q 002665 272 G 272 (895)
Q Consensus 272 G 272 (895)
|
T Consensus 160 G 160 (160)
T PF13579_consen 160 G 160 (160)
T ss_dssp -
T ss_pred C
Confidence 8
No 140
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.30 E-value=3.6e-11 Score=116.61 Aligned_cols=252 Identities=15% Similarity=0.111 Sum_probs=146.4
Q ss_pred cccEEEEEEecCCCC--hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCceEec
Q 002665 608 RRKYVFVIAADCDTT--SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYY 685 (895)
Q Consensus 608 ~~~kli~~DiDGTL~--~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~ 685 (895)
...++||+|+||||. ....+.....+..|++.| +.|++||..+..++..+-+.++++ +-.+|++||+.||-
T Consensus 5 ~~~~lIFtDlD~TLl~~~ye~~pA~pv~~el~d~G----~~Vi~~SSKT~aE~~~l~~~l~v~---~~p~iaEnG~aI~~ 77 (274)
T COG3769 5 QMPLLIFTDLDGTLLPHSYEWQPAAPVLLELKDAG----VPVILCSSKTRAEMLYLQKSLGVQ---GLPLIAENGAAIYL 77 (274)
T ss_pred ccceEEEEcccCcccCCCCCCCccchHHHHHHHcC----CeEEEeccchHHHHHHHHHhcCCC---CCceeecCCceEEe
Confidence 457899999999994 334455667788888887 999999999999999999999985 35799999999996
Q ss_pred CCCCCCCCCCCCcccCcchhhhhccccCcchHHHHHHHHhhhccCCCCcc-Cc-cccc---ccc------cccceEEEEE
Q 002665 686 PSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEE-GK-IVEE---DES------RSTIHCYAFE 754 (895)
Q Consensus 686 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~---~~~------~~~~~k~~~~ 754 (895)
+.+............+. .++.-...-+.+++.++++...+......+ +. .+.+ ... ..+.+..+.+
T Consensus 78 p~~~~~~~~~~r~~~g~---~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~~rEyseti~ 154 (274)
T COG3769 78 PKGWFPFDGKPREISGI---SHIELGKVLEKIREKLDKLEEHFGFTTFDDVDDEEIAEWTGLPREQAALAMLREYSETII 154 (274)
T ss_pred cccccccCCCCceecce---EeeehhhhHHHHHHHHHHHHHHhCeeEeccCCHHHHHHHhCCChHHhHHHHHHHhhhhee
Confidence 53221110000000000 001111111222222222221111100000 00 0000 000 0012222222
Q ss_pred ecCCCCCcCHHHHHHHHHhhcCeEEEEEeeCCeeEEeecCCCChHHHHHHHHHHh-CCCccc-EEEEeCcCCCccccccc
Q 002665 755 VTNPQMIPPVKELRKLMRIQALRCHVIYCQNGTKLHVIPVLASRSQALRYLHVRW-GIDLSN-VVVIAGECGDTDYEGLL 832 (895)
Q Consensus 755 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~s~~~~~lEI~p~g~sKg~al~~L~~~l-gi~~~~-viafgGD~nn~D~~~Ml 832 (895)
.++.+ .....+...|.+.+. ++.++.++.-+......||.|+..+++.+ -.+... +++ .||+.| | .+||
T Consensus 155 ~rs~d--~~~~~~~~~L~e~gl----t~v~garf~~v~~as~gKg~Aa~~ll~~y~rl~~~r~t~~-~GDg~n-D-~Pl~ 225 (274)
T COG3769 155 WRSSD--ERMAQFTARLNERGL----TFVHGARFWHVLDASAGKGQAANWLLETYRRLGGARTTLG-LGDGPN-D-APLL 225 (274)
T ss_pred ecccc--hHHHHHHHHHHhcCc----eEEeccceEEEeccccCccHHHHHHHHHHHhcCceeEEEe-cCCCCC-c-ccHH
Confidence 22222 123356667766543 44455558888889999999999988765 445556 555 788888 8 9999
Q ss_pred cCcceEEEEcCchhhhHhhhhcCCCCCCCcccCCCCceEEeccccChHHHHHHHHHhc
Q 002665 833 GGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEACDSYDIRASLEKLG 890 (895)
Q Consensus 833 ~~ag~gVaMgNA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~gI~~al~~~~ 890 (895)
+...+.+.++|-. .+..+-.. .+ +.+..+++.-..+|..++|+||.
T Consensus 226 ev~d~AfiV~~ln--re~~~lv~---------~i-~~vv~~~~~~~~~~~~e~~~~~~ 271 (274)
T COG3769 226 EVMDYAFIVKGLN--REGVHLVS---------SI-PAVVERIQREGPEGWREGLDHFF 271 (274)
T ss_pred Hhhhhheeecccc--hhhhhccc---------cc-hhheeeccccCchHHHHHhhhhc
Confidence 9999999999776 21111111 11 22334557777899999999984
No 141
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=99.27 E-value=2.2e-11 Score=107.78 Aligned_cols=91 Identities=18% Similarity=0.359 Sum_probs=85.6
Q ss_pred EEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHhhCHHHHHHHHHHHHHHH-
Q 002665 411 VFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNI- 489 (895)
Q Consensus 411 v~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~v- 489 (895)
++++|+..++++..++|+||||+|+|++..++..+++.++..++.++ |++++.++|..++++|++++++.+++++.+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~~~~~~~~ia~~a~~~v~ 78 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLLENPEERRRIAKNARERVL 78 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence 46889989999999999999999999999999999998888899997 999999999999999999999999999999
Q ss_pred hhCCHHHHHHHHHH
Q 002665 490 HQFSWPEHCKSYLS 503 (895)
Q Consensus 490 ~~~s~~~~a~~~~~ 503 (895)
++|+|++.++++++
T Consensus 79 ~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 79 KRHTWEHRAEQILE 92 (92)
T ss_pred HhCCHHHHHHHHHC
Confidence 59999999998864
No 142
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=99.19 E-value=2.1e-09 Score=105.91 Aligned_cols=181 Identities=17% Similarity=0.112 Sum_probs=116.8
Q ss_pred eEEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhh
Q 002665 7 NMKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLM 86 (895)
Q Consensus 7 ~~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 86 (895)
.+|++|...|. |+.+||.++.+.+|+..|+++| ++|+|.|+....+.. .
T Consensus 2 kkIaIiGtrGI----------Pa~YGGfET~ve~L~~~l~~~g--~~v~Vyc~~~~~~~~-------~------------ 50 (185)
T PF09314_consen 2 KKIAIIGTRGI----------PARYGGFETFVEELAPRLVSKG--IDVTVYCRSDYYPYK-------E------------ 50 (185)
T ss_pred ceEEEEeCCCC----------CcccCcHHHHHHHHHHHHhcCC--ceEEEEEccCCCCCC-------C------------
Confidence 37999999887 7889999999999999999998 999999997332111 0
Q ss_pred cccCCCCCcEEEEecCCCCCccccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCc-hHHHHHH
Q 002665 87 QGLGESSGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADA-GDAAALL 165 (895)
Q Consensus 87 ~~~~~~~g~~i~r~~~~~~~~~l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~-~~~~~~~ 165 (895)
....|++++.+|.+.. .. +..+ .-.+..+...+.... .+..+.||||.+...+ +++..++
T Consensus 51 ---~~y~gv~l~~i~~~~~-g~---------~~si----~yd~~sl~~al~~~~--~~~~~~~ii~ilg~~~g~~~~~~~ 111 (185)
T PF09314_consen 51 ---FEYNGVRLVYIPAPKN-GS---------AESI----IYDFLSLLHALRFIK--QDKIKYDIILILGYGIGPFFLPFL 111 (185)
T ss_pred ---cccCCeEEEEeCCCCC-Cc---------hHHH----HHHHHHHHHHHHHHh--hccccCCEEEEEcCCccHHHHHHH
Confidence 1236999999987533 11 1111 111111111111000 0114588999998764 4444444
Q ss_pred hc--cCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChH
Q 002665 166 SG--ALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPV 243 (895)
Q Consensus 166 ~~--~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~ 243 (895)
.+ ..|.|++++.|++.... ..| .. ..+.+.++ .|+.+.+.||.+|+.|+...+.+...|..
T Consensus 112 r~~~~~g~~v~vN~DGlEWkR-~KW------~~-----~~k~~lk~-~E~~avk~ad~lIaDs~~I~~y~~~~y~~---- 174 (185)
T PF09314_consen 112 RKLRKKGGKVVVNMDGLEWKR-AKW------GR-----PAKKYLKF-SEKLAVKYADRLIADSKGIQDYIKERYGR---- 174 (185)
T ss_pred HhhhhcCCcEEECCCcchhhh-hhc------CH-----HHHHHHHH-HHHHHHHhCCEEEEcCHHHHHHHHHHcCC----
Confidence 33 34779999999985432 111 11 11222222 48889999999999999877777777762
Q ss_pred HHHHHHHhHhccccccCCCCCCeEEeCCCCc
Q 002665 244 LERKLRARIKRGVSCHGRFMPRMVVIPPGIE 274 (895)
Q Consensus 244 ~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid 274 (895)
.+..+||.|.|
T Consensus 175 --------------------~~s~~IaYGad 185 (185)
T PF09314_consen 175 --------------------KKSTFIAYGAD 185 (185)
T ss_pred --------------------CCcEEecCCCC
Confidence 17899999976
No 143
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=99.12 E-value=9.6e-09 Score=116.31 Aligned_cols=194 Identities=13% Similarity=0.209 Sum_probs=139.2
Q ss_pred cccCEEEecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCC
Q 002665 217 DASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSP 296 (895)
Q Consensus 217 ~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~ 296 (895)
.+.|.||++|+.+.+.+..+++.. .++.++|-|+=.. + +..
T Consensus 238 ~~~~~iIv~T~~q~~di~~r~~~~-----------------------~~~~~ip~g~i~~-~-~~~-------------- 278 (438)
T TIGR02919 238 TRNKKIIIPNKNEYEKIKELLDNE-----------------------YQEQISQLGYLYP-F-KKD-------------- 278 (438)
T ss_pred cccCeEEeCCHHHHHHHHHHhCcc-----------------------cCceEEEEEEEEe-e-ccc--------------
Confidence 688999999988777776666431 1678888887522 1 100
Q ss_pred CCCCCchhhhhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHH
Q 002665 297 ASPDPPIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILK 376 (895)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~ 376 (895)
.....-++.++. ...|++++.+.+.-|+..+.+ |-+.+. -.+|.+
T Consensus 279 ----------------~r~~~~~l~~t~-------s~~I~~i~~Lv~~lPd~~f~I--ga~te~----------s~kL~~ 323 (438)
T TIGR02919 279 ----------------NKYRKQALILTN-------SDQIEHLEEIVQALPDYHFHI--AALTEM----------SSKLMS 323 (438)
T ss_pred ----------------cCCcccEEEECC-------HHHHHHHHHHHHhCCCcEEEE--EecCcc----------cHHHHH
Confidence 112334566661 899999999965455555544 554431 134445
Q ss_pred HHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCC-CCcccccccCCceEE
Q 002665 377 LIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN-GGPVDIHRVLDNGLL 455 (895)
Q Consensus 377 ~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~-gg~~eiv~~~~~g~l 455 (895)
+ .++ .+.+.|++.. ..++..+|..| |+++.++..|++++++.||+..|+||++.+. -|..+++.+ |.+
T Consensus 324 L-~~y--~nvvly~~~~-~~~l~~ly~~~----dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l 392 (438)
T TIGR02919 324 L-DKY--DNVKLYPNIT-TQKIQELYQTC----DIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENI 392 (438)
T ss_pred H-Hhc--CCcEEECCcC-hHHHHHHHHhc----cEEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---Cce
Confidence 5 555 4556666654 45799999999 9999999999999999999999999999885 355677644 889
Q ss_pred eCCCCHHHHHHHHHHHhhCHHHHHHHHHHHHHHHhhCCHH
Q 002665 456 VDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWP 495 (895)
Q Consensus 456 v~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~v~~~s~~ 495 (895)
++++++++|+++|.++|++++.++.....-++.+..-+.+
T Consensus 393 ~~~~~~~~m~~~i~~lL~d~~~~~~~~~~q~~~a~~~~~~ 432 (438)
T TIGR02919 393 FEHNEVDQLISKLKDLLNDPNQFRELLEQQREHANDISKE 432 (438)
T ss_pred ecCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHhccCCHH
Confidence 9999999999999999999988877776666665444433
No 144
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.06 E-value=3.2e-10 Score=110.55 Aligned_cols=75 Identities=15% Similarity=0.040 Sum_probs=60.9
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEEcCchhhhHhhhhcCCCCCCCcccCCCCceEEeccc
Q 002665 797 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEA 876 (895)
Q Consensus 797 sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaMgNA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 876 (895)
+|..+++.+++++|++++++++ +||+.| | ++|++.+|.+++|.|+. +.+++.+.+++++
T Consensus 76 ~k~~~~~~~~~~~~~~~~~~~~-vGDs~~-D-~~~~~~ag~~~~v~~~~------------------~~~~~~a~~i~~~ 134 (154)
T TIGR01670 76 NKLIAFSDILEKLALAPENVAY-IGDDLI-D-WPVMEKVGLSVAVADAH------------------PLLIPRADYVTRI 134 (154)
T ss_pred chHHHHHHHHHHcCCCHHHEEE-ECCCHH-H-HHHHHHCCCeEecCCcC------------------HHHHHhCCEEecC
Confidence 4889999999999999999988 788878 8 99999999999999998 3333344488887
Q ss_pred cC-hHHHHHHHHHhccc
Q 002665 877 CD-SYDIRASLEKLGVL 892 (895)
Q Consensus 877 ~~-~~gI~~al~~~~~~ 892 (895)
.. ++|.+++++.+=.+
T Consensus 135 ~~~~g~~~~~~~~~~~~ 151 (154)
T TIGR01670 135 AGGRGAVREVCELLLLA 151 (154)
T ss_pred CCCCcHHHHHHHHHHHh
Confidence 76 45599999876443
No 145
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.98 E-value=1.5e-10 Score=125.82 Aligned_cols=70 Identities=13% Similarity=0.132 Sum_probs=60.2
Q ss_pred CCChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEEcCchhhhHhhhhcCCCCCCCcccCCCCceEEec
Q 002665 795 LASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVD 874 (895)
Q Consensus 795 g~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaMgNA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 874 (895)
+..|+.+++.+++++|++++++++ +||+.| | ++|++.||+|||| ||. |.++..+.+++
T Consensus 246 ~k~K~~~L~~la~~lgi~~~qtIa-VGDg~N-D-l~m~~~AGlgiA~-nAk------------------p~Vk~~Ad~~i 303 (322)
T PRK11133 246 AQYKADTLTRLAQEYEIPLAQTVA-IGDGAN-D-LPMIKAAGLGIAY-HAK------------------PKVNEQAQVTI 303 (322)
T ss_pred cccHHHHHHHHHHHcCCChhhEEE-EECCHH-H-HHHHHHCCCeEEe-CCC------------------HHHHhhCCEEe
Confidence 458999999999999999999999 666666 7 9999999999999 999 55555556888
Q ss_pred cccChHHHHHHH
Q 002665 875 EACDSYDIRASL 886 (895)
Q Consensus 875 ~~~~~~gI~~al 886 (895)
...+-|||.+-|
T Consensus 304 ~~~~l~~~l~~~ 315 (322)
T PRK11133 304 RHADLMGVLCIL 315 (322)
T ss_pred cCcCHHHHHHHh
Confidence 899999998766
No 146
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=98.98 E-value=3e-08 Score=113.25 Aligned_cols=127 Identities=17% Similarity=0.084 Sum_probs=86.0
Q ss_pred CCCcEEEEEeCCCC---CCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeC
Q 002665 314 PRKPMILALARPDP---KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYP 390 (895)
Q Consensus 314 ~~~~~Il~vgrl~~---~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~ 390 (895)
...+++++.|.... .+-...+++|+..+ ...+++.+|...... ....++|.+.
T Consensus 238 ~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~-----~~~~i~~~g~~~~~~-------------------~~~~~~v~~~ 293 (401)
T cd03784 238 GRPPVYVGFGSMVVRDPEALARLDVEAVATL-----GQRAILSLGWGGLGA-------------------EDLPDNVRVV 293 (401)
T ss_pred CCCcEEEeCCCCcccCHHHHHHHHHHHHHHc-----CCeEEEEccCccccc-------------------cCCCCceEEe
Confidence 34567788888754 23445556666543 124434556543210 2345689999
Q ss_pred CCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCc----ccccccCCceEEeCCC--CHHHH
Q 002665 391 KHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGP----VDIHRVLDNGLLVDPH--DQQSI 464 (895)
Q Consensus 391 g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~----~eiv~~~~~g~lv~p~--d~~~l 464 (895)
+++| ...+|..| |++|. .|...++.|++++|+|+|.....+- .+.+...+.|+.+++. +.+++
T Consensus 294 ~~~p---~~~ll~~~----d~~I~----hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~~l 362 (401)
T cd03784 294 DFVP---HDWLLPRC----AAVVH----HGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAERL 362 (401)
T ss_pred CCCC---HHHHhhhh----heeee----cCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHHHH
Confidence 9975 45678889 99983 4556899999999999999876552 3344455667777665 68999
Q ss_pred HHHHHHHhhCH
Q 002665 465 ADALLKLVSDK 475 (895)
Q Consensus 465 a~ai~~ll~~~ 475 (895)
.++|.++++++
T Consensus 363 ~~al~~~l~~~ 373 (401)
T cd03784 363 AAALRRLLDPP 373 (401)
T ss_pred HHHHHHHhCHH
Confidence 99999999854
No 147
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=98.96 E-value=8.3e-10 Score=116.26 Aligned_cols=208 Identities=19% Similarity=0.108 Sum_probs=105.6
Q ss_pred EEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccc---c---
Q 002665 8 MKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRK---N--- 81 (895)
Q Consensus 8 ~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~---~--- 81 (895)
||+|++.... | -..+||....+..|+++|+++| |+|.|+++.+...............+... .
T Consensus 1 kIl~vt~E~~----P-----~~k~GGLgdv~~~L~kaL~~~G--~~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~v~~ 69 (245)
T PF08323_consen 1 KILMVTSEYA----P-----FAKVGGLGDVVGSLPKALAKQG--HDVRVIMPKYGFIDEEYFQLEPVRRLSVPFGGPVPV 69 (245)
T ss_dssp EEEEE-S-BT----T-----TB-SSHHHHHHHHHHHHHHHTT---EEEEEEE-THHHHHHCTTEEEEEEES-STTCEEEE
T ss_pred CEEEEEcccC----c-----ccccCcHhHHHHHHHHHHHhcC--CeEEEEEccchhhhhhhhcceEEEEecccccccccc
Confidence 7899997664 1 1599999999999999999999 99999998753211000000000000000 0
Q ss_pred ---chhhhcccCCCCCcEEEEecCCCCCccccccccCCCch---hHHHHHHHHH---HHHHHHhhhhcCCCCCCCCcEEE
Q 002665 82 ---TENLMQGLGESSGAYIIRIPFGPKDKYVQKELLWPHIP---EFVDAALTHI---IQISKVLGEQVGSGQPIWPVAIH 152 (895)
Q Consensus 82 ---~~~~~~~~~~~~g~~i~r~~~~~~~~~l~k~~~~~~l~---~f~~~~~~~~---~~~~~~l~~~~~~~~~~~pDvIh 152 (895)
.+.... -...+|++++.+... .+..+.. .|-. .+.+...++. +...+.++. + +++|||||
T Consensus 70 ~~~~~~~v~-~~~~~~v~v~~i~~~---~~f~r~~--iY~~~~~~~~d~~~rf~~fs~a~le~~~~-l----~~~pDIIH 138 (245)
T PF08323_consen 70 GVWYEVRVY-RYPVDGVPVYFIDNP---EYFDRPG--IYGDNGGDYPDNAERFAFFSRAALELLKK-L----GWKPDIIH 138 (245)
T ss_dssp E----EEEE-EEEETTEEEEEEESH---HHHGSSS--SSBSTSSBHTTHHHHHHHHHHHHHHHHCT-C----T-S-SEEE
T ss_pred ccceEEEEE-EEEcCCccEEEecCh---hhccccc--eeccCCCcchhHHHHHHHHHHHHHHHHHh-h----CCCCCEEE
Confidence 000000 001146777766543 2222222 2211 1222222222 222222222 1 25799999
Q ss_pred eccCCchHHHHHHhccC-------CCCEEEEeCCCchhhHHH--HHHhCCCChhhh--hhHhhHHHhHHHHHhhccccCE
Q 002665 153 GHYADAGDAAALLSGAL-------NVPMVFTGHSLGRDKLEQ--LLKQGRLSRDEI--NTTYKIMRRIEAEELSLDASEI 221 (895)
Q Consensus 153 ~h~~~~~~~~~~~~~~~-------~ip~v~t~H~~~~~~~~~--~~~~g~~~~~~~--~~~~~~~~r~~~e~~~~~~ad~ 221 (895)
+|.|.++.++..++... ++|+|+|+|++..+-... .+..-.+....+ ...+.+...+...+..+..||.
T Consensus 139 ~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~in~lk~gi~~AD~ 218 (245)
T PF08323_consen 139 CHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQINFLKAGIVYADK 218 (245)
T ss_dssp EECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEEEHHHHHHHHSSE
T ss_pred ecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccccccccccCHHHHHHHhcCE
Confidence 99999999999888875 599999999974332100 000000000000 0001112233345678999999
Q ss_pred EEecCHHHHHHHHHHh
Q 002665 222 VITSTRQEIEEQWRLY 237 (895)
Q Consensus 222 vi~~s~~~~~~~~~~y 237 (895)
|+|+|+..++++...+
T Consensus 219 v~TVS~~Ya~Ei~~~~ 234 (245)
T PF08323_consen 219 VTTVSPTYAREIQTPE 234 (245)
T ss_dssp EEESSHHHHHHTTSHH
T ss_pred eeeCCHHHHHHHhCcc
Confidence 9999999988876554
No 148
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.95 E-value=3.4e-07 Score=103.53 Aligned_cols=152 Identities=16% Similarity=0.281 Sum_probs=96.9
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEE--EEecCCCchhhhhhhHHHHHHHHHHHHHcCCCC--------------CEEeC
Q 002665 327 PKKNITTLVKAFGECRPLRELANLTL--IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYG--------------QVAYP 390 (895)
Q Consensus 327 ~~Kgi~~ll~A~~~l~~~~~~~~l~l--ivG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~--------------~v~~~ 390 (895)
..+++..+++++..+.+. +++.+ .+.+..+.+. +.+.+...++.. .+.+.
T Consensus 219 ~~~~lp~~l~al~~L~~~---~~~~~v~~~~~~~~~~~-----------~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~ 284 (396)
T TIGR03492 219 AYRNLKLLLRALEALPDS---QPFVFLAAIVPSLSLEK-----------LQAILEDLGWQLEGSSEDQTSLFQKGTLEVL 284 (396)
T ss_pred HHccHHHHHHHHHHHhhC---CCeEEEEEeCCCCCHHH-----------HHHHHHhcCceecCCccccchhhccCceEEE
Confidence 446888999999998532 34443 3433333333 223333334421 23333
Q ss_pred CCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcc---ccccc----CCceEEeCCCCHHH
Q 002665 391 KHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV---DIHRV----LDNGLLVDPHDQQS 463 (895)
Q Consensus 391 g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~---eiv~~----~~~g~lv~p~d~~~ 463 (895)
.+ ..++.++|+.| |++|.. .|.+..|++++|+|+|.....+.+ .+.+. ...++.+...+++.
T Consensus 285 ~~--~~~~~~~l~~A----DlvI~r-----SGt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g~~~~l~~~~~~~ 353 (396)
T TIGR03492 285 LG--RGAFAEILHWA----DLGIAM-----AGTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLGGSVFLASKNPEQ 353 (396)
T ss_pred ec--hHhHHHHHHhC----CEEEEC-----cCHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcCCEEecCCCCHHH
Confidence 33 36799999999 999976 355669999999999998743331 22222 12455555678899
Q ss_pred HHHHHHHHhhCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHH
Q 002665 464 IADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLS 503 (895)
Q Consensus 464 la~ai~~ll~~~~~~~~~~~~~~~~v-~~~s~~~~a~~~~~ 503 (895)
+++++.++++|++.++++.+++++.. +....+.+++.+.+
T Consensus 354 l~~~l~~ll~d~~~~~~~~~~~~~~lg~~~a~~~ia~~i~~ 394 (396)
T TIGR03492 354 AAQVVRQLLADPELLERCRRNGQERMGPPGASARIAESILK 394 (396)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 99999999999988888876555555 45555555554443
No 149
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=98.93 E-value=8.9e-07 Score=100.75 Aligned_cols=112 Identities=21% Similarity=0.181 Sum_probs=76.0
Q ss_pred CCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcc----cccccCCceEEeCC
Q 002665 383 LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV----DIHRVLDNGLLVDP 458 (895)
Q Consensus 383 l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~----eiv~~~~~g~lv~p 458 (895)
+.+++.+.+++|. ..++..| |++|.. |-..++.||+++|+|+|.....+-. +.+.+.+.|..++.
T Consensus 273 ~~~~v~~~~~~p~---~~ll~~~----~~~I~h----gG~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~ 341 (392)
T TIGR01426 273 LPPNVEVRQWVPQ---LEILKKA----DAFITH----GGMNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLPP 341 (392)
T ss_pred CCCCeEEeCCCCH---HHHHhhC----CEEEEC----CCchHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEecc
Confidence 3467888888865 3678889 998853 3345889999999999997755433 23344456777764
Q ss_pred C--CHHHHHHHHHHHhhCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Q 002665 459 H--DQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRI 505 (895)
Q Consensus 459 ~--d~~~la~ai~~ll~~~~~~~~~~~~~~~~v~~~s~~~~a~~~~~~l 505 (895)
. ++++++++|.+++.+++.++++.+-..+....-..+..++.+.+.+
T Consensus 342 ~~~~~~~l~~ai~~~l~~~~~~~~~~~l~~~~~~~~~~~~aa~~i~~~~ 390 (392)
T TIGR01426 342 EEVTAEKLREAVLAVLSDPRYAERLRKMRAEIREAGGARRAADEIEGFL 390 (392)
T ss_pred ccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHhh
Confidence 3 6789999999999998755555333333334455666665555443
No 150
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.92 E-value=1.5e-09 Score=106.50 Aligned_cols=71 Identities=14% Similarity=0.047 Sum_probs=56.2
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEEcCchhhhHhhhhcCCCCCCCcccCCCCceEEeccc
Q 002665 797 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEA 876 (895)
Q Consensus 797 sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaMgNA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 876 (895)
.|-..++.+++++|++++++++ +||+.| | ++|++.+|+++||+||. +.++..+.+|+..
T Consensus 82 pkp~~~~~~~~~l~~~~~ev~~-iGD~~n-D-i~~~~~ag~~~am~nA~------------------~~lk~~A~~I~~~ 140 (169)
T TIGR02726 82 KKTEPYAQMLEEMNISDAEVCY-VGDDLV-D-LSMMKRVGLAVAVGDAV------------------ADVKEAAAYVTTA 140 (169)
T ss_pred CCHHHHHHHHHHcCcCHHHEEE-ECCCHH-H-HHHHHHCCCeEECcCch------------------HHHHHhCCEEcCC
Confidence 4567899999999999999999 667677 7 99999999999999999 4444445588887
Q ss_pred cChHHH-HHHHHH
Q 002665 877 CDSYDI-RASLEK 888 (895)
Q Consensus 877 ~~~~gI-~~al~~ 888 (895)
...+|+ .+.+++
T Consensus 141 ~~~~g~v~e~~e~ 153 (169)
T TIGR02726 141 RGGHGAVREVAEL 153 (169)
T ss_pred CCCCCHHHHHHHH
Confidence 777764 444443
No 151
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.89 E-value=1.6e-06 Score=94.40 Aligned_cols=258 Identities=16% Similarity=0.187 Sum_probs=156.7
Q ss_pred CCCcEEEec---cCCchHHHHHHhccCCCCEEEE-eCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCE
Q 002665 146 IWPVAIHGH---YADAGDAAALLSGALNVPMVFT-GHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEI 221 (895)
Q Consensus 146 ~~pDvIh~h---~~~~~~~~~~~~~~~~ip~v~t-~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~ 221 (895)
++||++..- .|+... .-++..|+|+++. .+-... .+. .|+ ++-...+..++..|.
T Consensus 122 ~~P~l~Ii~EtElWPnli---~e~~~~~~p~~LvNaRLS~r-S~~---------------~y~--k~~~~~~~~~~~i~l 180 (419)
T COG1519 122 WRPKLLIIMETELWPNLI---NELKRRGIPLVLVNARLSDR-SFA---------------RYA--KLKFLARLLFKNIDL 180 (419)
T ss_pred cCCCEEEEEeccccHHHH---HHHHHcCCCEEEEeeeechh-hhH---------------HHH--HHHHHHHHHHHhcce
Confidence 579988754 354332 3455669997664 321111 111 111 111224556899999
Q ss_pred EEecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCC
Q 002665 222 VITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDP 301 (895)
Q Consensus 222 vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~ 301 (895)
|++.|+...+++..+ |+. ++.+.-| +..+.... ....
T Consensus 181 i~aQse~D~~Rf~~L------------------Ga~-------~v~v~GN---lKfd~~~~---------------~~~~ 217 (419)
T COG1519 181 ILAQSEEDAQRFRSL------------------GAK-------PVVVTGN---LKFDIEPP---------------PQLA 217 (419)
T ss_pred eeecCHHHHHHHHhc------------------CCc-------ceEEecc---eeecCCCC---------------hhhH
Confidence 999999888876442 221 4454444 22111111 0112
Q ss_pred chhhhhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCchhhhhhhHHHHHHHHHHHHH
Q 002665 302 PIWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDDIDEMSGTNAALLLSILKLIDK 380 (895)
Q Consensus 302 ~~~~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~l-ivG~~~~~~~l~~~~~~~~~~i~~~~~~ 380 (895)
...+.++.... ..++++++.+.- ..--+..++++..+++.. +++.+ ++...++ -...+.+++++
T Consensus 218 ~~~~~~r~~l~-~~r~v~iaaSTH--~GEeei~l~~~~~l~~~~--~~~llIlVPRHpE----------Rf~~v~~l~~~ 282 (419)
T COG1519 218 AELAALRRQLG-GHRPVWVAASTH--EGEEEIILDAHQALKKQF--PNLLLILVPRHPE----------RFKAVENLLKR 282 (419)
T ss_pred HHHHHHHHhcC-CCCceEEEecCC--CchHHHHHHHHHHHHhhC--CCceEEEecCChh----------hHHHHHHHHHH
Confidence 22233333332 238899998882 233355889999997544 45554 5555442 24556677777
Q ss_pred cCCCC-------------CEEeCCCCCCCcHHHHHHHhhcCCcEEEec-CCCCCCChHHHHHHHcCCCEEEcCC-CCccc
Q 002665 381 YDLYG-------------QVAYPKHHKQSDVPDIYRLAAKTKGVFINP-AFIEPFGLTLIEAAAYGLPIVATKN-GGPVD 445 (895)
Q Consensus 381 ~~l~~-------------~v~~~g~~~~~el~~ly~~a~~~~Dv~v~p-s~~eg~gl~~~Ea~a~G~PVvat~~-gg~~e 445 (895)
.|+.- .|.+... .-||..+|..| |++++- |+.+-.|--++|++++|+|||+-.. -...|
T Consensus 283 ~gl~~~~rS~~~~~~~~tdV~l~Dt--mGEL~l~y~~a----diAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~e 356 (419)
T COG1519 283 KGLSVTRRSQGDPPFSDTDVLLGDT--MGELGLLYGIA----DIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSD 356 (419)
T ss_pred cCCeEEeecCCCCCCCCCcEEEEec--HhHHHHHHhhc----cEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHH
Confidence 76631 1111111 13799999999 998887 4555456789999999999999763 23333
Q ss_pred cc---ccCCceEEeCCCCHHHHHHHHHHHhhCHHHHHHHHHHHHHHHh
Q 002665 446 IH---RVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIH 490 (895)
Q Consensus 446 iv---~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~v~ 490 (895)
+. ...+.++.|+ |.+.+++++..+++|++.++++++++.+.+.
T Consensus 357 i~~~l~~~ga~~~v~--~~~~l~~~v~~l~~~~~~r~~~~~~~~~~v~ 402 (419)
T COG1519 357 IAERLLQAGAGLQVE--DADLLAKAVELLLADEDKREAYGRAGLEFLA 402 (419)
T ss_pred HHHHHHhcCCeEEEC--CHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 33 3345678886 6888888888888899999999999999884
No 152
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.81 E-value=3.5e-09 Score=106.37 Aligned_cols=68 Identities=15% Similarity=0.023 Sum_probs=52.5
Q ss_pred hHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEEcCchhhhHhhhhcCCCCCCCcccCCCCceEEecccc
Q 002665 798 RSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEAC 877 (895)
Q Consensus 798 Kg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaMgNA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 877 (895)
|..+++.+++++|++++++++ +||+.+ | ++|++.+|++++|+|+. ...+.. +.+++...
T Consensus 97 k~~~l~~~~~~~gl~~~ev~~-VGDs~~-D-~~~a~~aG~~~~v~~~~--~~~~~~----------------a~~v~~~~ 155 (183)
T PRK09484 97 KLIAFSDLLEKLAIAPEQVAY-IGDDLI-D-WPVMEKVGLSVAVADAH--PLLLPR----------------ADYVTRIA 155 (183)
T ss_pred HHHHHHHHHHHhCCCHHHEEE-ECCCHH-H-HHHHHHCCCeEecCChh--HHHHHh----------------CCEEecCC
Confidence 568899999999999999988 777777 7 99999999999998776 222222 33777766
Q ss_pred ChHHHHHHH
Q 002665 878 DSYDIRASL 886 (895)
Q Consensus 878 ~~~gI~~al 886 (895)
..+|....|
T Consensus 156 ~g~g~~~el 164 (183)
T PRK09484 156 GGRGAVREV 164 (183)
T ss_pred CCCCHHHHH
Confidence 666765554
No 153
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=98.78 E-value=1.2e-06 Score=98.21 Aligned_cols=279 Identities=16% Similarity=0.136 Sum_probs=155.9
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCCCCcEEEecc-CCchHHHHHHhccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhH
Q 002665 124 AALTHIIQISKVLGEQVGSGQPIWPVAIHGHY-ADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTT 202 (895)
Q Consensus 124 ~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~-~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~ 202 (895)
.+...+..+.+.+.+ .+||+|.++. ..+...++..+..+++|+++.--+.-.. |. .+.
T Consensus 77 ~~~~~~~~~~~~~~~-------~~Pd~vlv~GD~~~~la~alaA~~~~IPv~HveaG~rs~--------~~-----~eE- 135 (365)
T TIGR03568 77 SMGLTIIGFSDAFER-------LKPDLVVVLGDRFEMLAAAIAAALLNIPIAHIHGGEVTE--------GA-----IDE- 135 (365)
T ss_pred HHHHHHHHHHHHHHH-------hCCCEEEEeCCchHHHHHHHHHHHhCCcEEEEECCccCC--------CC-----chH-
Confidence 334444455555555 6799999997 5677788899999999998543332100 10 000
Q ss_pred hhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCC-CCcCCCcccC
Q 002665 203 YKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPP-GIEFHHIVRH 281 (895)
Q Consensus 203 ~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~-Gid~~~f~~~ 281 (895)
..|++ .-+.|+..+++++...+.+.+. |+.. .++.++-| ++|.-.....
T Consensus 136 --~~r~~-----i~~la~l~f~~t~~~~~~L~~e------------------g~~~-----~~i~~tG~~~iD~l~~~~~ 185 (365)
T TIGR03568 136 --SIRHA-----ITKLSHLHFVATEEYRQRVIQM------------------GEDP-----DRVFNVGSPGLDNILSLDL 185 (365)
T ss_pred --HHHHH-----HHHHHhhccCCCHHHHHHHHHc------------------CCCC-----CcEEEECCcHHHHHHhhhc
Confidence 11111 2345678888888766655331 2211 16665544 6664322110
Q ss_pred CCCCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEE-EEEeCCC--CC---CCHHHHHHHHHhcccccCCCcEEEEEe
Q 002665 282 NGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMI-LALARPD--PK---KNITTLVKAFGECRPLRELANLTLIMG 355 (895)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I-l~vgrl~--~~---Kgi~~ll~A~~~l~~~~~~~~l~livG 355 (895)
. .......++..+++++++ +.+-+-. .. +.+..+++++..+ .. ++.++..
T Consensus 186 ~-------------------~~~~~~~~lgl~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~---~~--~~~vi~P 241 (365)
T TIGR03568 186 L-------------------SKEELEEKLGIDLDKPYALVTFHPVTLEKESAEEQIKELLKALDEL---NK--NYIFTYP 241 (365)
T ss_pred c-------------------CHHHHHHHhCCCCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHh---cc--CCEEEEe
Confidence 0 011223344444344454 4443322 22 3455555555544 21 3334432
Q ss_pred cC-CCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCC
Q 002665 356 NR-DDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLP 434 (895)
Q Consensus 356 ~~-~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~P 434 (895)
.. +.... ....+...... .+++.+.+.++..++..+++.| +++|- ++-|.. .||.+.|+|
T Consensus 242 ~~~p~~~~-------i~~~i~~~~~~---~~~v~l~~~l~~~~~l~Ll~~a----~~vit----dSSggi-~EA~~lg~P 302 (365)
T TIGR03568 242 NADAGSRI-------INEAIEEYVNE---HPNFRLFKSLGQERYLSLLKNA----DAVIG----NSSSGI-IEAPSFGVP 302 (365)
T ss_pred CCCCCchH-------HHHHHHHHhcC---CCCEEEECCCChHHHHHHHHhC----CEEEE----cChhHH-HhhhhcCCC
Confidence 22 22211 12233333211 4679999999999999999999 89872 332333 899999999
Q ss_pred EEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHhhCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHH
Q 002665 435 IVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSR 504 (895)
Q Consensus 435 Vvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~v~~~s~~~~a~~~~~~ 504 (895)
+|. .|.-+|.+..+.+.++| +.|++++.+++.+++ +++.++.+ ......|-..+-++++.+.
T Consensus 303 vv~--l~~R~e~~~~g~nvl~v-g~~~~~I~~a~~~~~-~~~~~~~~----~~~~~pygdg~as~rI~~~ 364 (365)
T TIGR03568 303 TIN--IGTRQKGRLRADSVIDV-DPDKEEIVKAIEKLL-DPAFKKSL----KNVKNPYGDGNSSERIIEI 364 (365)
T ss_pred EEe--ecCCchhhhhcCeEEEe-CCCHHHHHHHHHHHh-ChHHHHHH----hhCCCCCCCChHHHHHHHh
Confidence 995 45577777777788878 679999999999954 44322221 1111346555555555543
No 154
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=98.72 E-value=1.5e-06 Score=95.86 Aligned_cols=82 Identities=16% Similarity=0.215 Sum_probs=59.1
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccc------ccccCCceEEeC
Q 002665 384 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVD------IHRVLDNGLLVD 457 (895)
Q Consensus 384 ~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~e------iv~~~~~g~lv~ 457 (895)
.+++.+.++.+ +++.++|..| |++|.- +-..++.|++++|+|+|.....+..| .+.+.+.|+.++
T Consensus 228 ~~~v~~~~~~~-~~~~~~l~~a----d~vI~~----~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~ 298 (321)
T TIGR00661 228 NENVEIRRITT-DNFKELIKNA----ELVITH----GGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALE 298 (321)
T ss_pred CCCEEEEECCh-HHHHHHHHhC----CEEEEC----CChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcC
Confidence 35788887755 6899999999 999864 33457999999999999988765333 344556788887
Q ss_pred CCCHHHHHHHHHHHhhCH
Q 002665 458 PHDQQSIADALLKLVSDK 475 (895)
Q Consensus 458 p~d~~~la~ai~~ll~~~ 475 (895)
..+. ++.+++.+.++++
T Consensus 299 ~~~~-~~~~~~~~~~~~~ 315 (321)
T TIGR00661 299 YKEL-RLLEAILDIRNMK 315 (321)
T ss_pred hhhH-HHHHHHHhccccc
Confidence 7666 5555555555443
No 155
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=98.67 E-value=1.5e-06 Score=95.95 Aligned_cols=119 Identities=17% Similarity=0.243 Sum_probs=79.2
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCC
Q 002665 314 PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHH 393 (895)
Q Consensus 314 ~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~ 393 (895)
+.+.+++++|..+.. .+++++..+ +...++ ++|.... + .-.+++.+.++.
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~~----~~~~~~-v~g~~~~--~-------------------~~~~ni~~~~~~ 240 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKAL----PDYQFI-VFGPNAA--D-------------------PRPGNIHVRPFS 240 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHhC----CCCeEE-EEcCCcc--c-------------------ccCCCEEEeecC
Confidence 356688999987766 667777765 334554 4465420 0 014578877652
Q ss_pred CCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccc------ccccCCceEEeCCC--CHHHHH
Q 002665 394 KQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVD------IHRVLDNGLLVDPH--DQQSIA 465 (895)
Q Consensus 394 ~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~e------iv~~~~~g~lv~p~--d~~~la 465 (895)
..++.+++..| |++|.- +.-.++.|++++|+|+|.-...+..| .++..+.|..+++. +++.++
T Consensus 241 -~~~~~~~m~~a----d~vIs~----~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l~ 311 (318)
T PF13528_consen 241 -TPDFAELMAAA----DLVISK----GGYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERLA 311 (318)
T ss_pred -hHHHHHHHHhC----CEEEEC----CCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHHH
Confidence 37899999999 998853 33345999999999999988654333 23344567776543 578888
Q ss_pred HHHHHH
Q 002665 466 DALLKL 471 (895)
Q Consensus 466 ~ai~~l 471 (895)
++|.++
T Consensus 312 ~~l~~~ 317 (318)
T PF13528_consen 312 EFLERL 317 (318)
T ss_pred HHHhcC
Confidence 888764
No 156
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.55 E-value=1.2e-07 Score=92.35 Aligned_cols=67 Identities=13% Similarity=0.058 Sum_probs=55.8
Q ss_pred EEEEEecCCCC--------------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHH---HHHHh-----CCCCC
Q 002665 612 VFVIAADCDTT--------------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELH---SLLVS-----GGLSP 669 (895)
Q Consensus 612 li~~DiDGTL~--------------~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~---~~l~~-----l~l~~ 669 (895)
+|++||||||+ +..++.+.+++++++++| +.|+++|||+...+. +++.+ .+++
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~G----~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp- 75 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNNG----YKILYLTARPIGQADRTRSYLSQIKQDGHNLP- 75 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHcC----CeEEEEcCCcHHHHHHHHHHHHHhhhccccCC-
Confidence 58999999994 356899999999999987 999999999999874 78877 3352
Q ss_pred CCCCEEEeCCCceEec
Q 002665 670 LAFDAFICNSGSELYY 685 (895)
Q Consensus 670 ~~~d~~I~~nGa~I~~ 685 (895)
+++++++||+.++.
T Consensus 76 --~g~li~~~g~~~~~ 89 (157)
T smart00775 76 --HGPVLLSPDRLFAA 89 (157)
T ss_pred --CceEEEcCCcchhh
Confidence 35899999998863
No 157
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=98.52 E-value=1.8e-06 Score=82.52 Aligned_cols=127 Identities=20% Similarity=0.291 Sum_probs=80.7
Q ss_pred hHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhhcccCCCCCcEEEEecCCCCCccccccccC
Q 002665 36 KYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQKELLW 115 (895)
Q Consensus 36 ~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~g~~i~r~~~~~~~~~l~k~~~~ 115 (895)
.++.+++++|.++| ++|+++|..... .. .+..+++++++++.+.. . .+
T Consensus 11 ~~~~~~~~~L~~~g--~~V~ii~~~~~~--------~~---------------~~~~~~i~~~~~~~~~k------~-~~ 58 (139)
T PF13477_consen 11 TFIYNLAKELKKRG--YDVHIITPRNDY--------EK---------------YEIIEGIKVIRLPSPRK------S-PL 58 (139)
T ss_pred HHHHHHHHHHHHCC--CEEEEEEcCCCc--------hh---------------hhHhCCeEEEEecCCCC------c-cH
Confidence 47889999999999 999999984211 00 11125888888864321 1 11
Q ss_pred CCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCc-hHHHHHHhccCC-CCEEEEeCCCchhhHHHHHHhCC
Q 002665 116 PHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADA-GDAAALLSGALN-VPMVFTGHSLGRDKLEQLLKQGR 193 (895)
Q Consensus 116 ~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~-~~~~~~~~~~~~-ip~v~t~H~~~~~~~~~~~~~g~ 193 (895)
+++ . ..++.+.+++ .+|||||+|...+ +.++..+++..+ +|+|++.|++.... .+.
T Consensus 59 ~~~--------~-~~~l~k~ik~-------~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~~~------~~~ 116 (139)
T PF13477_consen 59 NYI--------K-YFRLRKIIKK-------EKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDFYN------SSK 116 (139)
T ss_pred HHH--------H-HHHHHHHhcc-------CCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCeeec------CCc
Confidence 111 1 1133333333 6799999999764 777878888888 99999999863311 000
Q ss_pred CChhhhhhHhhHHHhHHHHHhhccccCEEEecC
Q 002665 194 LSRDEINTTYKIMRRIEAEELSLDASEIVITST 226 (895)
Q Consensus 194 ~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s 226 (895)
..++.+. .++.+++.||.|++.|
T Consensus 117 --------~~~~~~~--~~~~~~k~~~~ii~~~ 139 (139)
T PF13477_consen 117 --------KKKLKKF--IIKFAFKRADKIIVQS 139 (139)
T ss_pred --------hHHHHHH--HHHHHHHhCCEEEEcC
Confidence 0112222 2566799999999865
No 158
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.44 E-value=1.3e-07 Score=87.77 Aligned_cols=64 Identities=14% Similarity=0.073 Sum_probs=53.2
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEEcCchhhhHhhhhcCCCCCCCcccCCCCceEEeccc
Q 002665 797 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSHNVIQVDEA 876 (895)
Q Consensus 797 sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaMgNA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 876 (895)
+|-.+.+.|+++++++++++.. +||+-+ | +++|+.+|.++|+.||. |.+++.++|||..
T Consensus 83 dK~~a~~~L~~~~~l~~e~~ay-iGDD~~-D-lpvm~~vGls~a~~dAh------------------~~v~~~a~~Vt~~ 141 (170)
T COG1778 83 DKLAAFEELLKKLNLDPEEVAY-VGDDLV-D-LPVMEKVGLSVAVADAH------------------PLLKQRADYVTSK 141 (170)
T ss_pred hHHHHHHHHHHHhCCCHHHhhh-hcCccc-c-HHHHHHcCCcccccccC------------------HHHHHhhHhhhhc
Confidence 4777888999999999999977 555555 6 99999999999999999 7777777799887
Q ss_pred cChHH
Q 002665 877 CDSYD 881 (895)
Q Consensus 877 ~~~~g 881 (895)
-.-.|
T Consensus 142 ~GG~G 146 (170)
T COG1778 142 KGGEG 146 (170)
T ss_pred cCcch
Confidence 65555
No 159
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.41 E-value=2.3e-05 Score=84.39 Aligned_cols=98 Identities=20% Similarity=0.306 Sum_probs=73.1
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCC
Q 002665 316 KPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQ 395 (895)
Q Consensus 316 ~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~ 395 (895)
+.+++++|..+..+....+++++.++ ....++.+|+|.+... ..++.+.+... +++.+.+++
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~---~~~~~i~vv~G~~~~~----------~~~l~~~~~~~---~~i~~~~~~-- 232 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAES---QINISITLVTGSSNPN----------LDELKKFAKEY---PNIILFIDV-- 232 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhcc---ccCceEEEEECCCCcC----------HHHHHHHHHhC---CCEEEEeCH--
Confidence 46899999999888777888888765 3445677788876321 12333444432 468887774
Q ss_pred CcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCC
Q 002665 396 SDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN 440 (895)
Q Consensus 396 ~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~ 440 (895)
++++++|..| |++|.. .|.++.|++++|+|+|+-..
T Consensus 233 ~~m~~lm~~a----Dl~Is~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 233 ENMAELMNEA----DLAIGA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred HHHHHHHHHC----CEEEEC-----CchHHHHHHHcCCCEEEEEe
Confidence 7899999999 999864 56899999999999998654
No 160
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.34 E-value=2.5e-06 Score=87.38 Aligned_cols=52 Identities=23% Similarity=0.286 Sum_probs=44.9
Q ss_pred eEEeecCCCChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEEc
Q 002665 788 KLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILK 842 (895)
Q Consensus 788 ~lEI~p~g~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaMg 842 (895)
.+-.+-.+-+|..+++.+++.+|+++++++| .||+.| | ++||+.+|++||..
T Consensus 135 v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a-~gDs~n-D-lpml~~ag~~ia~n 186 (212)
T COG0560 135 VVGPICDGEGKAKALRELAAELGIPLEETVA-YGDSAN-D-LPMLEAAGLPIAVN 186 (212)
T ss_pred eeeeecCcchHHHHHHHHHHHcCCCHHHeEE-EcCchh-h-HHHHHhCCCCeEeC
Confidence 4445556668999999999999999999999 777777 7 99999999999994
No 161
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.34 E-value=0.00011 Score=79.05 Aligned_cols=124 Identities=14% Similarity=0.148 Sum_probs=102.5
Q ss_pred CCCCCEEeCCCCCC-CcHHHHHHHhhcCCcEEEecCC---CCC---CChHHHHHHHcCCCEEEcCCCCcccccccCCceE
Q 002665 382 DLYGQVAYPKHHKQ-SDVPDIYRLAAKTKGVFINPAF---IEP---FGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGL 454 (895)
Q Consensus 382 ~l~~~v~~~g~~~~-~el~~ly~~a~~~~Dv~v~ps~---~eg---~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~ 454 (895)
.|.+++.+.|+++. ..++..|+.- +++++-++ .++ ++.-+.|+++||.+.++....+..-.+..+..-+
T Consensus 234 ~~~~~~~yIg~~~~~~~v~~~~~~~----~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~i 309 (373)
T COG4641 234 TWEPNVQYIGYYNPKDGVPNAFKRD----DVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDII 309 (373)
T ss_pred cccchhhhhhccCccchhhhccccc----ceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheE
Confidence 35667777787776 7899999999 99987754 222 2678999999999999999888877777665555
Q ss_pred EeCCCCHHHHHHHHHHHhhCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHHHHHhhhc
Q 002665 455 LVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRISSCKQR 511 (895)
Q Consensus 455 lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~v-~~~s~~~~a~~~~~~l~~~~~~ 511 (895)
+. .|.+++.+.+..++..+++++++.+.+.+.+ ..|+.+.-+..+++.+.++..+
T Consensus 310 v~--~d~kdl~~~~~yll~h~~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~sI~~r 365 (373)
T COG4641 310 VY--QDSKDLKEKLKYLLNHPDERKEIAECAYERVLARHTYEERIFKLLNEIASINIR 365 (373)
T ss_pred Ee--cCHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHh
Confidence 54 5999999999999999999999999999999 5899999998899888886554
No 162
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=98.29 E-value=4.1e-06 Score=88.63 Aligned_cols=70 Identities=16% Similarity=0.177 Sum_probs=58.6
Q ss_pred EEEEEEecCCCC--hhhHHHHHHHHHHHhccCCCCceEEEEEcC---CCHHHHHHHHHhCCCCCCCCCEEEeCCCceEec
Q 002665 611 YVFVIAADCDTT--SDFLEIIKKVVEAAGKDNSAGFIGFVLSTA---LTILELHSLLVSGGLSPLAFDAFICNSGSELYY 685 (895)
Q Consensus 611 kli~~DiDGTL~--~~~~~~~~~~l~~l~~~g~~~~i~vviaTG---R~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~ 685 (895)
|+++||+||||. ....+.+.+++++|+++| +.|+++|| |+...+.+.++.+|++. .+|-+|+++|+.+.+
T Consensus 2 ~~~~~D~DGtl~~~~~~i~~a~~~l~~l~~~g----~~~~~~Tnn~~r~~~~~~~~l~~~g~~~-~~~~iit~~~~~~~~ 76 (249)
T TIGR01457 2 KGYLIDLDGTMYKGKERIPEAETFVHELQKRD----IPYLFVTNNSTRTPESVAEMLASFDIPA-TLETVFTASMATADY 76 (249)
T ss_pred CEEEEeCCCceEcCCeeCcCHHHHHHHHHHCC----CeEEEEeCCCCCCHHHHHHHHHHcCCCC-ChhhEeeHHHHHHHH
Confidence 689999999992 334447899999999987 99999995 99999999999999863 567899999987654
No 163
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=98.29 E-value=1.1e-05 Score=77.71 Aligned_cols=200 Identities=14% Similarity=0.080 Sum_probs=110.9
Q ss_pred cccEEEEEEecCCCC---hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCceEe
Q 002665 608 RRKYVFVIAADCDTT---SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELY 684 (895)
Q Consensus 608 ~~~kli~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~ 684 (895)
..+-|+.||.||||+ ..+++...+.|+.|++. +.+.++-|-.+.-+.+-+..-=+ ..+||.-++||..-|
T Consensus 9 ~~~~l~lfdvdgtLt~~r~~~~~e~~~~l~~lr~~-----v~ig~VggsDl~k~~eqlG~~Vl--~~fDY~F~ENGl~~y 81 (252)
T KOG3189|consen 9 DEETLCLFDVDGTLTPPRQKVTPEMLEFLQKLRKK-----VTIGFVGGSDLSKQQEQLGDNVL--EEFDYVFSENGLVAY 81 (252)
T ss_pred CCceEEEEecCCccccccccCCHHHHHHHHHHhhh-----eEEEEeecHHHHHHHHHhchhHH--hhhcccccCCCeeEe
Confidence 455689999999996 56778888888888887 88999999887766554422112 457999999999887
Q ss_pred cCCCCCCCCCCCCcccCcchhhhhccccCcchHHHHHHHHhhhccCCCCccCcccccccccccceEEEEEecCCC-----
Q 002665 685 YPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQ----- 759 (895)
Q Consensus 685 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~----- 759 (895)
..+ +....+....++.+....+-+.-.+..+.......+ ...+++.... -..++-..++..
T Consensus 82 k~g---------k~~~~Qsi~~~LGee~~q~liNF~LrYlsdidlPiK---RGtFiEFRNg--MiNvsPIGR~cs~EER~ 147 (252)
T KOG3189|consen 82 KGG---------KLLSKQSIINHLGEEKLQELINFCLRYLSDIDLPIK---RGTFIEFRNG--MINVSPIGRNCSQEERN 147 (252)
T ss_pred eCC---------cchhHHHHHHHHhHHHHHHHHHHHHHHHHhcCCccc---ccceEEecCC--ceeccccccccCHHHHH
Confidence 654 223223333333222111111111111111111111 0111111000 001111111111
Q ss_pred ------CCcC-HHHHHHHHHhhcCeEEEEEeeCC-eeEEeecCCCChHHHHHHHHHHhCCCcccEEEEeCc----CCCcc
Q 002665 760 ------MIPP-VKELRKLMRIQALRCHVIYCQNG-TKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGE----CGDTD 827 (895)
Q Consensus 760 ------~~~~-~~~l~~~l~~~~~~~~~~~s~~~-~~lEI~p~g~sKg~al~~L~~~lgi~~~~viafgGD----~nn~D 827 (895)
.... -+.+-+.|++......+++|-++ -.+||.|+|..|---|++|-.. |++ +|-|+|| ++| |
T Consensus 148 eF~e~Dkk~~iR~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d-gf~---~IhFFGDkT~~GGN-D 222 (252)
T KOG3189|consen 148 EFEELDKKHKIREKFVEALREEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD-GFD---TIHFFGDKTMPGGN-D 222 (252)
T ss_pred HHHHhhhhhhhHHHHHHHHHHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc-CCc---eEEEeccccCCCCC-c
Confidence 0000 12233344444445556666553 4799999999999999998776 666 7778888 467 7
Q ss_pred ccccccC
Q 002665 828 YEGLLGG 834 (895)
Q Consensus 828 ~~~Ml~~ 834 (895)
.|.|.-
T Consensus 223 -yEIf~d 228 (252)
T KOG3189|consen 223 -YEIFAD 228 (252)
T ss_pred -ceeeeC
Confidence 888864
No 164
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.24 E-value=1.9e-06 Score=81.52 Aligned_cols=52 Identities=19% Similarity=0.227 Sum_probs=45.5
Q ss_pred EEEEEecCCCC--h---------hhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 612 VFVIAADCDTT--S---------DFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 612 li~~DiDGTL~--~---------~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
+++||+||||. . .+.+.+.+.++.|+++| +.++|+|||....+..+++.+++
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g----~~i~ivS~~~~~~~~~~~~~~~~ 63 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEKG----IKLALATNKSRREVLELLEELGL 63 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHHHHCC----CeEEEEeCchHHHHHHHHHHcCC
Confidence 47999999993 2 55678999999999986 89999999999999999999876
No 165
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=98.24 E-value=1e-05 Score=89.72 Aligned_cols=272 Identities=18% Similarity=0.206 Sum_probs=138.4
Q ss_pred CCCcEEEeccC-CchHHHHHHhccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEe
Q 002665 146 IWPVAIHGHYA-DAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVIT 224 (895)
Q Consensus 146 ~~pDvIh~h~~-~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~ 224 (895)
.+||+|..+.= ...++++..+..+++|+++.--++ +. +.......+. ..|. .+-+.|+..++
T Consensus 66 ~~Pd~Vlv~GD~~~~la~alaA~~~~ipv~HieaGl-Rs--------~d~~~g~~de---~~R~-----~i~~la~lhf~ 128 (346)
T PF02350_consen 66 EKPDAVLVLGDRNEALAAALAAFYLNIPVAHIEAGL-RS--------GDRTEGMPDE---INRH-----AIDKLAHLHFA 128 (346)
T ss_dssp HT-SEEEEETTSHHHHHHHHHHHHTT-EEEEES--------------S-TTSSTTHH---HHHH-----HHHHH-SEEEE
T ss_pred cCCCEEEEEcCCchHHHHHHHHHHhCCCEEEecCCC-Cc--------cccCCCCchh---hhhh-----hhhhhhhhhcc
Confidence 57999999864 567777888999999955543332 00 0111011111 1222 14567999999
Q ss_pred cCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCC-CCcCCCcccCCCCCCCcccccCCCCCCCCCch
Q 002665 225 STRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPP-GIEFHHIVRHNGDVDGEVERDEGSPASPDPPI 303 (895)
Q Consensus 225 ~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~-Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (895)
+|+...+.+.+. +..+. +|.+.-+ ++|.-....... .+ .
T Consensus 129 ~t~~~~~~L~~~--G~~~~---------------------rI~~vG~~~~D~l~~~~~~~----------------~~-~ 168 (346)
T PF02350_consen 129 PTEEARERLLQE--GEPPE---------------------RIFVVGNPGIDALLQNKEEI----------------EE-K 168 (346)
T ss_dssp SSHHHHHHHHHT--T--GG---------------------GEEE---HHHHHHHHHHHTT----------------CC--
T ss_pred CCHHHHHHHHhc--CCCCC---------------------eEEEEChHHHHHHHHhHHHH----------------hh-h
Confidence 999888776442 22232 7777764 455432211110 00 0
Q ss_pred hhhhhhccCCCCCcEEEEEe-CCCC---CCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHH
Q 002665 304 WSEIMHFFSNPRKPMILALA-RPDP---KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLID 379 (895)
Q Consensus 304 ~~~~~~~~~~~~~~~Il~vg-rl~~---~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~ 379 (895)
.. ...+.....++++|..- |... ......+.+++..+.+. +...+++.+.+.| .....+.+.+.
T Consensus 169 ~~-~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~vi~~~hn~p----------~~~~~i~~~l~ 236 (346)
T PF02350_consen 169 YK-NSGILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAER-QNVPVIFPLHNNP----------RGSDIIIEKLK 236 (346)
T ss_dssp HH-HHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHH-TTEEEEEE--S-H----------HHHHHHHHHHT
T ss_pred hh-hHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhc-CCCcEEEEecCCc----------hHHHHHHHHhc
Confidence 00 01111113445554444 3332 23466777777777543 3334434444322 12344455555
Q ss_pred HcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHH-HHHHcCCCEEEcC-CCCcccccccCCceEEeC
Q 002665 380 KYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLI-EAAAYGLPIVATK-NGGPVDIHRVLDNGLLVD 457 (895)
Q Consensus 380 ~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~-Ea~a~G~PVvat~-~gg~~eiv~~~~~g~lv~ 457 (895)
++ +++.+...++..++..+++.| +++|- ..| .+. ||..+|+|+|.-. .|--++.+..+. ..++.
T Consensus 237 ~~---~~v~~~~~l~~~~~l~ll~~a----~~vvg-----dSs-GI~eEa~~lg~P~v~iR~~geRqe~r~~~~-nvlv~ 302 (346)
T PF02350_consen 237 KY---DNVRLIEPLGYEEYLSLLKNA----DLVVG-----DSS-GIQEEAPSLGKPVVNIRDSGERQEGRERGS-NVLVG 302 (346)
T ss_dssp T----TTEEEE----HHHHHHHHHHE----SEEEE-----SSH-HHHHHGGGGT--EEECSSS-S-HHHHHTTS-EEEET
T ss_pred cc---CCEEEECCCCHHHHHHHHhcc----eEEEE-----cCc-cHHHHHHHhCCeEEEecCCCCCHHHHhhcc-eEEeC
Confidence 55 389999999999999999999 88762 234 555 9999999999985 455556655544 44475
Q ss_pred CCCHHHHHHHHHHHhhCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Q 002665 458 PHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRI 505 (895)
Q Consensus 458 p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~v~~~s~~~~a~~~~~~l 505 (895)
.|.+++.++|.+++.+++.+..+.+ ....|-=...++++.+.|
T Consensus 303 -~~~~~I~~ai~~~l~~~~~~~~~~~----~~npYgdG~as~rI~~~L 345 (346)
T PF02350_consen 303 -TDPEAIIQAIEKALSDKDFYRKLKN----RPNPYGDGNASERIVEIL 345 (346)
T ss_dssp -SSHHHHHHHHHHHHH-HHHHHHHHC----S--TT-SS-HHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHhChHHHHhhcc----CCCCCCCCcHHHHHHHhh
Confidence 7999999999999988544433221 112344444555555554
No 166
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=98.21 E-value=0.00039 Score=81.20 Aligned_cols=137 Identities=12% Similarity=0.089 Sum_probs=90.0
Q ss_pred CcEEEEEeCCCC-----CCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeC
Q 002665 316 KPMILALARPDP-----KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYP 390 (895)
Q Consensus 316 ~~~Il~vgrl~~-----~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~ 390 (895)
..++++.|.... .+-+..+++|++.+. .++.+-.++.. . . .++.++|.+.
T Consensus 297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~-----~~viw~~~~~~-~------------------~-~~~p~Nv~i~ 351 (507)
T PHA03392 297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLP-----YNVLWKYDGEV-E------------------A-INLPANVLTQ 351 (507)
T ss_pred cEEEEECCCCCcCCCCCHHHHHHHHHHHHhCC-----CeEEEEECCCc-C------------------c-ccCCCceEEe
Confidence 467788888643 234567777877662 13322223211 0 0 1345789999
Q ss_pred CCCCCCcHHHHH--HHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCC----cccccccCCceEEeCCC--CHH
Q 002665 391 KHHKQSDVPDIY--RLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGG----PVDIHRVLDNGLLVDPH--DQQ 462 (895)
Q Consensus 391 g~~~~~el~~ly--~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg----~~eiv~~~~~g~lv~p~--d~~ 462 (895)
+++|+.+ ++ ..+ ++|| ..|...++.||+.+|+|+|.-...+ ....+...+.|+.++.. +.+
T Consensus 352 ~w~Pq~~---lL~hp~v----~~fI----tHGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~ 420 (507)
T PHA03392 352 KWFPQRA---VLKHKNV----KAFV----TQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAA 420 (507)
T ss_pred cCCCHHH---HhcCCCC----CEEE----ecCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCHH
Confidence 9998765 45 345 8887 3666789999999999999987643 23333445678888654 678
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHH
Q 002665 463 SIADALLKLVSDKQLWERCRQNGLKN 488 (895)
Q Consensus 463 ~la~ai~~ll~~~~~~~~~~~~~~~~ 488 (895)
++.++|.+++++++-++...+-++..
T Consensus 421 ~l~~ai~~vl~~~~y~~~a~~ls~~~ 446 (507)
T PHA03392 421 QLVLAIVDVIENPKYRKNLKELRHLI 446 (507)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 99999999999977555544444443
No 167
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=98.20 E-value=0.00072 Score=73.96 Aligned_cols=66 Identities=26% Similarity=0.262 Sum_probs=50.1
Q ss_pred cHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCC---cccccccCCceEEeCCCCHHHHHHHHHHHhh
Q 002665 397 DVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGG---PVDIHRVLDNGLLVDPHDQQSIADALLKLVS 473 (895)
Q Consensus 397 el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg---~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~ 473 (895)
+...|+..| |++| .+.|....||...|+|.|++..|- .-+.+. ..|+++...|++++.+.+.+.+.
T Consensus 241 d~~~Ll~~a----~l~I-----g~ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~--~~Gll~~~~~~~ei~~~v~~~~~ 309 (335)
T PF04007_consen 241 DGLDLLYYA----DLVI-----GGGGTMAREAALLGTPAISCFPGKLLAVDKYLI--EKGLLYHSTDPDEIVEYVRKNLG 309 (335)
T ss_pred CHHHHHHhc----CEEE-----eCCcHHHHHHHHhCCCEEEecCCcchhHHHHHH--HCCCeEecCCHHHHHHHHHHhhh
Confidence 555788899 9988 456788899999999999987653 223332 35889998999999887666553
No 168
>PLN02448 UDP-glycosyltransferase family protein
Probab=98.18 E-value=0.0016 Score=75.31 Aligned_cols=93 Identities=14% Similarity=0.021 Sum_probs=58.9
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcc----ccccc-CCceEEeC--
Q 002665 385 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV----DIHRV-LDNGLLVD-- 457 (895)
Q Consensus 385 ~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~----eiv~~-~~~g~lv~-- 457 (895)
+++.+.+++|+.++ +..+ +.++|| ..+-..+++||+++|+|+|+-...+=+ ..+.+ -+.|+.+.
T Consensus 323 ~~~~v~~w~pQ~~i---L~h~--~v~~fv----tHgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~ 393 (459)
T PLN02448 323 DMGLVVPWCDQLKV---LCHS--SVGGFW----THCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKRE 393 (459)
T ss_pred CCEEEeccCCHHHH---hccC--ccceEE----ecCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecc
Confidence 35677788877764 4445 013355 245556889999999999998765422 22322 24566653
Q ss_pred -----CCCHHHHHHHHHHHhhCH-HHHHHHHHHHH
Q 002665 458 -----PHDQQSIADALLKLVSDK-QLWERCRQNGL 486 (895)
Q Consensus 458 -----p~d~~~la~ai~~ll~~~-~~~~~~~~~~~ 486 (895)
.-+.+++++++++++.++ ++-+.++++++
T Consensus 394 ~~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~ 428 (459)
T PLN02448 394 VGEETLVGREEIAELVKRFMDLESEEGKEMRRRAK 428 (459)
T ss_pred cccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHH
Confidence 237899999999999864 33344444443
No 169
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=98.14 E-value=0.00016 Score=82.07 Aligned_cols=108 Identities=14% Similarity=0.123 Sum_probs=76.9
Q ss_pred cCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCC----cccccccCCceEEe
Q 002665 381 YDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGG----PVDIHRVLDNGLLV 456 (895)
Q Consensus 381 ~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg----~~eiv~~~~~g~lv 456 (895)
-++..++...+++|+.+ ++..| |+++. -|-..+..|++.+|+|+|+-..+. ..+.+++-+.|...
T Consensus 280 ~~~p~n~~v~~~~p~~~---~l~~a----d~vI~----hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l 348 (406)
T COG1819 280 VNVPDNVIVADYVPQLE---LLPRA----DAVIH----HGGAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIAL 348 (406)
T ss_pred ccCCCceEEecCCCHHH---Hhhhc----CEEEe----cCCcchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceec
Confidence 35667888888876665 88899 99985 455678899999999999987654 33445555678777
Q ss_pred C--CCCHHHHHHHHHHHhhCHHHHHHHHHHHHHHHhhCCHHHHHH
Q 002665 457 D--PHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCK 499 (895)
Q Consensus 457 ~--p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~v~~~s~~~~a~ 499 (895)
. ..+++.++++|+++|++++-++...+.++..-+.-.....++
T Consensus 349 ~~~~l~~~~l~~av~~vL~~~~~~~~~~~~~~~~~~~~g~~~~a~ 393 (406)
T COG1819 349 PFEELTEERLRAAVNEVLADDSYRRAAERLAEEFKEEDGPAKAAD 393 (406)
T ss_pred CcccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcccHHHHHH
Confidence 6 689999999999999988755554444433333444333333
No 170
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=98.09 E-value=6.7e-06 Score=76.14 Aligned_cols=54 Identities=11% Similarity=0.044 Sum_probs=42.6
Q ss_pred EEEEEEecCCCCh---h------hHHHHHHHHHHHhccCCCCceEEEEEcCCCHHH---------------HHHHHHhCC
Q 002665 611 YVFVIAADCDTTS---D------FLEIIKKVVEAAGKDNSAGFIGFVLSTALTILE---------------LHSLLVSGG 666 (895)
Q Consensus 611 kli~~DiDGTL~~---~------~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~---------------~~~~l~~l~ 666 (895)
|+|++|+||||.. . +.+.+++++++++++| +.|+++|||+... +..||.+.+
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~G----~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ 77 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKALG----FEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHN 77 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHCC----CEEEEECCCCchhhhccccccchhhHHHHHHHHHHcC
Confidence 6899999999942 1 3457777788777876 9999999998764 467888888
Q ss_pred CC
Q 002665 667 LS 668 (895)
Q Consensus 667 l~ 668 (895)
++
T Consensus 78 ip 79 (126)
T TIGR01689 78 VP 79 (126)
T ss_pred CC
Confidence 85
No 171
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=98.06 E-value=0.00028 Score=76.07 Aligned_cols=108 Identities=19% Similarity=0.304 Sum_probs=72.7
Q ss_pred cHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCc----ccccccCC-ceEEe-CC------CCHHHH
Q 002665 397 DVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGP----VDIHRVLD-NGLLV-DP------HDQQSI 464 (895)
Q Consensus 397 el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~----~eiv~~~~-~g~lv-~p------~d~~~l 464 (895)
|..++-+.| .+.|+||++|++|.+..|.-.+|+|-|+|+..|. .|.|++.. .|+.+ +- .+.+++
T Consensus 493 DYeeFVRGC----HLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL 568 (692)
T KOG3742|consen 493 DYEEFVRGC----HLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQL 568 (692)
T ss_pred CHHHHhccc----cccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHH
Confidence 677788888 9999999999999999999999999999997664 45555432 46654 31 234555
Q ss_pred HHHHHHHhhCHHHHHHHH-HHHHHHH-hhCCHHHHHHHHHHHHHHhh
Q 002665 465 ADALLKLVSDKQLWERCR-QNGLKNI-HQFSWPEHCKSYLSRISSCK 509 (895)
Q Consensus 465 a~ai~~ll~~~~~~~~~~-~~~~~~v-~~~s~~~~a~~~~~~l~~~~ 509 (895)
++-+..... ...|+++. +|--+++ .-.+|..+..-|.+.=.-.+
T Consensus 569 ~~~m~~F~~-qsRRQRIiqRNrtErLSdLLDWk~lG~~Y~~aR~laL 614 (692)
T KOG3742|consen 569 ASFMYEFCK-QSRRQRIIQRNRTERLSDLLDWKYLGRYYRKARHLAL 614 (692)
T ss_pred HHHHHHHHH-HHHHHHHHHhcchhhHHHHHhHHHHhHHHHHHHHHHH
Confidence 555555443 22333333 3333444 46899988887776544333
No 172
>PLN03007 UDP-glucosyltransferase family protein
Probab=98.01 E-value=0.0065 Score=70.77 Aligned_cols=134 Identities=13% Similarity=0.160 Sum_probs=75.8
Q ss_pred CCcEEEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEEEEecCCCc----hhhhhhhHHHHHHHHHHHHHcCCCCCEE
Q 002665 315 RKPMILALARPDP--KKNITTLVKAFGECRPLRELANLTLIMGNRDDI----DEMSGTNAALLLSILKLIDKYDLYGQVA 388 (895)
Q Consensus 315 ~~~~Il~vgrl~~--~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~----~~l~~~~~~~~~~i~~~~~~~~l~~~v~ 388 (895)
...+.++.|.... .+.+..++.+++.+ ..++..+++..... ..+. . ...++.. ..++.
T Consensus 285 ~svvyvsfGS~~~~~~~~~~~~~~~l~~~-----~~~flw~~~~~~~~~~~~~~lp-------~---~~~~r~~-~~g~~ 348 (482)
T PLN03007 285 DSVIYLSFGSVASFKNEQLFEIAAGLEGS-----GQNFIWVVRKNENQGEKEEWLP-------E---GFEERTK-GKGLI 348 (482)
T ss_pred CceEEEeecCCcCCCHHHHHHHHHHHHHC-----CCCEEEEEecCCcccchhhcCC-------H---HHHHHhc-cCCEE
Confidence 4467788887642 33455555665554 23555566642111 0111 0 1111111 24677
Q ss_pred eCCCCCCCcHHHHHHHhhcCCcE--EEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccc----c-ccCCceEEe-----
Q 002665 389 YPKHHKQSDVPDIYRLAAKTKGV--FINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDI----H-RVLDNGLLV----- 456 (895)
Q Consensus 389 ~~g~~~~~el~~ly~~a~~~~Dv--~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~ei----v-~~~~~g~lv----- 456 (895)
+.+++|+.+ ++..+ ++ || ..+--.+++||+++|+|+|+....+=+-. + +.-..|+-+
T Consensus 349 v~~w~PQ~~---iL~h~----~v~~fv----tH~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~ 417 (482)
T PLN03007 349 IRGWAPQVL---ILDHQ----ATGGFV----THCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKL 417 (482)
T ss_pred EecCCCHHH---HhccC----ccceee----ecCcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccc
Confidence 888987754 56665 44 55 23444688999999999999876432211 1 111234433
Q ss_pred ---C--CCCHHHHHHHHHHHhhCH
Q 002665 457 ---D--PHDQQSIADALLKLVSDK 475 (895)
Q Consensus 457 ---~--p~d~~~la~ai~~ll~~~ 475 (895)
+ --+.++++++|++++.++
T Consensus 418 ~~~~~~~~~~~~l~~av~~~m~~~ 441 (482)
T PLN03007 418 VKVKGDFISREKVEKAVREVIVGE 441 (482)
T ss_pred cccccCcccHHHHHHHHHHHhcCc
Confidence 1 137889999999999865
No 173
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=98.01 E-value=6.5e-05 Score=84.76 Aligned_cols=186 Identities=10% Similarity=0.051 Sum_probs=118.5
Q ss_pred hhhhhhhccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcC
Q 002665 303 IWSEIMHFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYD 382 (895)
Q Consensus 303 ~~~~~~~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~ 382 (895)
....+..++++.+..++++..++ .|=-+..++++.++++.-|...+ ++...+... ...+.+.+.+.|
T Consensus 272 v~~~R~~~gLp~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~L--~L~~~~~~~---------~~~l~~~~~~~G 338 (468)
T PF13844_consen 272 VVTTRAQYGLPEDAVVFGSFNNL--FKISPETLDLWARILKAVPNSRL--WLLRFPASG---------EARLRRRFAAHG 338 (468)
T ss_dssp EEEETGGGT--SSSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEEE--EEEETSTTH---------HHHHHHHHHHTT
T ss_pred cccCHHHcCCCCCceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcEE--EEeeCCHHH---------HHHHHHHHHHcC
Confidence 34566778888887777777765 77788999999999755554444 332222111 245677788888
Q ss_pred CCC-CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccc-----cccc-CCceEE
Q 002665 383 LYG-QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVD-----IHRV-LDNGLL 455 (895)
Q Consensus 383 l~~-~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~e-----iv~~-~~~g~l 455 (895)
+.+ ++.|.+..+.++....|+.+ ||+|=|.. -+-+.+.+||+.+|+|||+-.....+. ++.. +-.-++
T Consensus 339 v~~~Ri~f~~~~~~~ehl~~~~~~----DI~LDT~p-~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElI 413 (468)
T PF13844_consen 339 VDPDRIIFSPVAPREEHLRRYQLA----DICLDTFP-YNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELI 413 (468)
T ss_dssp S-GGGEEEEE---HHHHHHHGGG-----SEEE--SS-S--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB
T ss_pred CChhhEEEcCCCCHHHHHHHhhhC----CEEeeCCC-CCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhc
Confidence 874 79998888888888899999 99998743 334789999999999999865432221 2222 112233
Q ss_pred eCCCCHHHHHHHHHHHhhCHHHHHHHHHHHHHHH-h--hCCHHHHHHHHHHHHHHh
Q 002665 456 VDPHDQQSIADALLKLVSDKQLWERCRQNGLKNI-H--QFSWPEHCKSYLSRISSC 508 (895)
Q Consensus 456 v~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~v-~--~~s~~~~a~~~~~~l~~~ 508 (895)
. .|.++..+.-.++.+|++.++++++..++.. + -|+-..+++.+.+.|+.+
T Consensus 414 A--~s~~eYv~~Av~La~D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~m 467 (468)
T PF13844_consen 414 A--DSEEEYVEIAVRLATDPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQM 467 (468)
T ss_dssp ---SSHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHH
T ss_pred C--CCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHh
Confidence 3 4899999999999999999999999998877 3 599999999999998864
No 174
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.00 E-value=1.5e-05 Score=83.50 Aligned_cols=72 Identities=17% Similarity=0.024 Sum_probs=58.0
Q ss_pred cccEEEEEEecCCCC---hhh---HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCc
Q 002665 608 RRKYVFVIAADCDTT---SDF---LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGS 681 (895)
Q Consensus 608 ~~~kli~~DiDGTL~---~~~---~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa 681 (895)
...++|+||+||||. +.+ ++.+.++|++|+++| +.++|+|+++...+...++.+|+. .-+| .|+++|.
T Consensus 124 ~~~kvIvFDLDgTLi~~~~~v~irdPgV~EaL~~LkekG----ikLaIaTS~~Re~v~~~L~~lGLd-~YFd-vIIs~Gd 197 (301)
T TIGR01684 124 EPPHVVVFDLDSTLITDEEPVRIRDPRIYDSLTELKKRG----CILVLWSYGDRDHVVESMRKVKLD-RYFD-IIISGGH 197 (301)
T ss_pred ccceEEEEecCCCCcCCCCccccCCHHHHHHHHHHHHCC----CEEEEEECCCHHHHHHHHHHcCCC-cccC-EEEECCc
Confidence 467899999999992 223 589999999999997 999999999999999999999994 1223 5666777
Q ss_pred eEec
Q 002665 682 ELYY 685 (895)
Q Consensus 682 ~I~~ 685 (895)
....
T Consensus 198 v~~~ 201 (301)
T TIGR01684 198 KAEE 201 (301)
T ss_pred cccC
Confidence 6654
No 175
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.95 E-value=0.0011 Score=72.06 Aligned_cols=287 Identities=19% Similarity=0.203 Sum_probs=172.0
Q ss_pred HHHHHHHHHHhhhhcCCCCCCCCcEEEeccC-CchHHHHHHhccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhh
Q 002665 126 LTHIIQISKVLGEQVGSGQPIWPVAIHGHYA-DAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYK 204 (895)
Q Consensus 126 ~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~-~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~ 204 (895)
...+..+.+.+.+ .+||+|..|.= .+.++++..+...+||+.+.--++-. +... + ..-
T Consensus 78 ~~~i~~~~~vl~~-------~kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEAGlRt---------~~~~---~--PEE 136 (383)
T COG0381 78 GNIIEGLSKVLEE-------EKPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEAGLRT---------GDLY---F--PEE 136 (383)
T ss_pred HHHHHHHHHHHHh-------hCCCEEEEeCCcchHHHHHHHHHHhCCceEEEeccccc---------CCCC---C--cHH
Confidence 3344444444454 68999999974 46666688888999999887655411 1100 0 000
Q ss_pred HHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCC-cCCCcccCCC
Q 002665 205 IMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGI-EFHHIVRHNG 283 (895)
Q Consensus 205 ~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gi-d~~~f~~~~~ 283 (895)
+-|+ ..-..++..+++|+...+.+.+. +..+ .+|.|+-|.+ |.-.......
T Consensus 137 ~NR~-----l~~~~S~~hfapte~ar~nLl~E--G~~~---------------------~~IfvtGnt~iDal~~~~~~~ 188 (383)
T COG0381 137 INRR-----LTSHLSDLHFAPTEIARKNLLRE--GVPE---------------------KRIFVTGNTVIDALLNTRDRV 188 (383)
T ss_pred HHHH-----HHHHhhhhhcCChHHHHHHHHHc--CCCc---------------------cceEEeCChHHHHHHHHHhhh
Confidence 1122 23456788899998877766432 2222 2677777753 3221110000
Q ss_pred CCCCcccccCCCCCCCCCchhhhhhhccCCCCCcEEE-EEeCCCCC-CCHHHHHHHHHhcccccCCCcEEEEEecCCCch
Q 002665 284 DVDGEVERDEGSPASPDPPIWSEIMHFFSNPRKPMIL-ALARPDPK-KNITTLVKAFGECRPLRELANLTLIMGNRDDID 361 (895)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il-~vgrl~~~-Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~ 361 (895)
. ........+ ....++++|+ ..=|..-. +++..+++++.++.++. +++.+|....+. .
T Consensus 189 ~--------------~~~~~~~~~---~~~~~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~--~~~~viyp~H~~-~ 248 (383)
T COG0381 189 L--------------EDSKILAKG---LDDKDKKYILVTAHRRENVGEPLEEICEALREIAEEY--PDVIVIYPVHPR-P 248 (383)
T ss_pred c--------------cchhhHHhh---hccccCcEEEEEcchhhcccccHHHHHHHHHHHHHhC--CCceEEEeCCCC-h
Confidence 0 000011111 2234444544 44454322 89999999999987655 455556655443 1
Q ss_pred hhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCC-
Q 002665 362 EMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN- 440 (895)
Q Consensus 362 ~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~- 440 (895)
. +.++. ...++-.+++.+...+.+.+...|...| .++++ ..|...-||-..|+||+.-..
T Consensus 249 ~--------v~e~~--~~~L~~~~~v~li~pl~~~~f~~L~~~a-----~~ilt----DSGgiqEEAp~lg~Pvl~lR~~ 309 (383)
T COG0381 249 R--------VRELV--LKRLKNVERVKLIDPLGYLDFHNLMKNA-----FLILT----DSGGIQEEAPSLGKPVLVLRDT 309 (383)
T ss_pred h--------hhHHH--HHHhCCCCcEEEeCCcchHHHHHHHHhc-----eEEEe----cCCchhhhHHhcCCcEEeeccC
Confidence 1 12222 3566666789999999999999999999 44554 346678899999999998653
Q ss_pred CCcccccccCCceEEeCCCCHHHHHHHHHHHhhCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Q 002665 441 GGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRIS 506 (895)
Q Consensus 441 gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~v~~~s~~~~a~~~~~~l~ 506 (895)
.--+|.++. +.-.++. .+.+.+.+++.+++++++.+++|++..-- |.=...++++.+.+.
T Consensus 310 TERPE~v~a-gt~~lvg-~~~~~i~~~~~~ll~~~~~~~~m~~~~np----Ygdg~as~rIv~~l~ 369 (383)
T COG0381 310 TERPEGVEA-GTNILVG-TDEENILDAATELLEDEEFYERMSNAKNP----YGDGNASERIVEILL 369 (383)
T ss_pred CCCccceec-CceEEeC-ccHHHHHHHHHHHhhChHHHHHHhcccCC----CcCcchHHHHHHHHH
Confidence 334555543 3455664 58899999999999999888776654433 433334444444444
No 176
>PLN02208 glycosyltransferase family protein
Probab=97.94 E-value=0.022 Score=65.37 Aligned_cols=112 Identities=13% Similarity=0.100 Sum_probs=67.9
Q ss_pred CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCC----cccc-cccCCceEEeCC--
Q 002665 386 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGG----PVDI-HRVLDNGLLVDP-- 458 (895)
Q Consensus 386 ~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg----~~ei-v~~~~~g~lv~p-- 458 (895)
++.+.++.|+.++ ++.. +.++|| ..+--.+++|++++|+|+|+-..-+ ...+ +..-+.|+.++.
T Consensus 312 g~~v~~W~PQ~~i---L~H~--~v~~Fv----tHcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~ 382 (442)
T PLN02208 312 GVVWGGWVQQPLI---LDHP--SIGCFV----NHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREK 382 (442)
T ss_pred CcEeeccCCHHHH---hcCC--ccCeEE----ccCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEecccc
Confidence 5667788888774 4444 114455 2444568899999999999987543 2222 222356777753
Q ss_pred ---CCHHHHHHHHHHHhhCH-HHHHHHHHHHHHH---H-hhCCHHHHHHHHHHHHH
Q 002665 459 ---HDQQSIADALLKLVSDK-QLWERCRQNGLKN---I-HQFSWPEHCKSYLSRIS 506 (895)
Q Consensus 459 ---~d~~~la~ai~~ll~~~-~~~~~~~~~~~~~---v-~~~s~~~~a~~~~~~l~ 506 (895)
-+.++++++|.++++++ ++.+++++++++. + +.-|-....++|++.+.
T Consensus 383 ~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~~~gsS~~~l~~~v~~l~ 438 (442)
T PLN02208 383 TGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILVSPGLLTGYVDKFVEELQ 438 (442)
T ss_pred CCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 37889999999999754 3444444444433 3 23344444455555443
No 177
>PLN02670 transferase, transferring glycosyl groups
Probab=97.88 E-value=0.028 Score=64.88 Aligned_cols=114 Identities=11% Similarity=0.013 Sum_probs=73.6
Q ss_pred EEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCC----cccccccCCceEEeCC----
Q 002665 387 VAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGG----PVDIHRVLDNGLLVDP---- 458 (895)
Q Consensus 387 v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg----~~eiv~~~~~g~lv~p---- 458 (895)
+.+.+++|+.+ +++.. +.++|| ..+--.+++|++++|+|+|+....+ ....+...+.|+.++.
T Consensus 341 ~vv~~W~PQ~~---IL~H~--~v~~Fv----tHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~ 411 (472)
T PLN02670 341 MIHVGWVPQVK---ILSHE--SVGGFL----THCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERD 411 (472)
T ss_pred eEEeCcCCHHH---HhcCc--ccceee----ecCCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccC
Confidence 56678888776 44444 114455 2455578999999999999987543 2233334567877753
Q ss_pred --CCHHHHHHHHHHHhhCHH--HHHHHHHHHHHHH-hhCCHHHHHHHHHHHHHHhh
Q 002665 459 --HDQQSIADALLKLVSDKQ--LWERCRQNGLKNI-HQFSWPEHCKSYLSRISSCK 509 (895)
Q Consensus 459 --~d~~~la~ai~~ll~~~~--~~~~~~~~~~~~v-~~~s~~~~a~~~~~~l~~~~ 509 (895)
-+.+++.++|++++.+++ +.++..+..++.+ .+=.....++.+++.+.+..
T Consensus 412 ~~~~~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~~ 467 (472)
T PLN02670 412 GSFTSDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLRENR 467 (472)
T ss_pred CcCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHhc
Confidence 358999999999998642 3333333334444 35566677777777776554
No 178
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=97.87 E-value=0.0074 Score=64.29 Aligned_cols=338 Identities=16% Similarity=0.129 Sum_probs=173.7
Q ss_pred cceEEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcC--CCcceEEEeeccccCCCCCCCCCccccccccccc
Q 002665 5 DFNMKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSM--PGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNT 82 (895)
Q Consensus 5 ~~~~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~--g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~ 82 (895)
+-+||+|.|.|-+ |- |+-+....+|++|.+. | .+|.++|.....+. +++
T Consensus 8 ~~~Ri~~Yshd~~--------Gl-----GHlrR~~~Ia~aLv~d~~~--~~Il~IsG~~~~~~--F~~------------ 58 (400)
T COG4671 8 KRPRILFYSHDLL--------GL-----GHLRRALRIAHALVEDYLG--FDILIISGGPPAGG--FPG------------ 58 (400)
T ss_pred ccceEEEEehhhc--------cc-----hHHHHHHHHHHHHhhcccC--ceEEEEeCCCccCC--CCC------------
Confidence 4569999996543 44 8999999999999999 8 99999998632111 111
Q ss_pred hhhhcccCCCCCcEEEEecCCCCCc--cccccccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchH
Q 002665 83 ENLMQGLGESSGAYIIRIPFGPKDK--YVQKELLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGD 160 (895)
Q Consensus 83 ~~~~~~~~~~~g~~i~r~~~~~~~~--~l~k~~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~ 160 (895)
..|++.+.+|+-.+.. ...-..+..-+.++. ++-.++ +.... +..+||++.....+.|.
T Consensus 59 ---------~~gVd~V~LPsl~k~~~G~~~~~d~~~~l~e~~----~~Rs~l---il~t~---~~fkPDi~IVd~~P~Gl 119 (400)
T COG4671 59 ---------PAGVDFVKLPSLIKGDNGEYGLVDLDGDLEETK----KLRSQL---ILSTA---ETFKPDIFIVDKFPFGL 119 (400)
T ss_pred ---------cccCceEecCceEecCCCceeeeecCCCHHHHH----HHHHHH---HHHHH---HhcCCCEEEEeccccch
Confidence 1488888888742210 011111111233332 222221 11111 12789999998776553
Q ss_pred HHH---HH--hccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHH
Q 002665 161 AAA---LL--SGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWR 235 (895)
Q Consensus 161 ~~~---~~--~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~ 235 (895)
..- .+ -+..+.+.|.-..++- +.. ....+-.++-..++.+-+..|.|.+-..........
T Consensus 120 r~EL~ptL~yl~~~~t~~vL~lr~i~-D~p--------------~~~~~~w~~~~~~~~I~r~yD~V~v~GdP~f~d~~~ 184 (400)
T COG4671 120 RFELLPTLEYLKTTGTRLVLGLRSIR-DIP--------------QELEADWRRAETVRLINRFYDLVLVYGDPDFYDPLT 184 (400)
T ss_pred hhhhhHHHHHHhhcCCcceeehHhhh-hch--------------hhhccchhhhHHHHHHHHhheEEEEecCccccChhh
Confidence 211 11 1223445555555431 100 001111233333455567889998876655555544
Q ss_pred HhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcCCCcccCCCCCCCcccccCCCCCCCCCchhhhhhhccCCCC
Q 002665 236 LYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHIVRHNGDVDGEVERDEGSPASPDPPIWSEIMHFFSNPR 315 (895)
Q Consensus 236 ~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (895)
.|+....- +-.+.+-|.= ++--+.. +.+.-+ .+.+
T Consensus 185 ~~~~~~~i---------------------~~k~~ytG~v-q~~~~~~----------------~~p~~~-------~pE~ 219 (400)
T COG4671 185 EFPFAPAI---------------------RAKMRYTGFV-QRSLPHL----------------PLPPHE-------APEG 219 (400)
T ss_pred cCCccHhh---------------------hhheeEeEEe-eccCcCC----------------CCCCcC-------CCcc
Confidence 55443221 2334444432 1100000 000000 0234
Q ss_pred CcEEEEEeCC-CCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCC
Q 002665 316 KPMILALARP-DPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHK 394 (895)
Q Consensus 316 ~~~Il~vgrl-~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~ 394 (895)
..+++++|.- +...=+...+.|...+..+.+ +..+|.|.- |.+ .....+...+ .-.+++.+..+
T Consensus 220 ~~Ilvs~GGG~dG~eLi~~~l~A~~~l~~l~~--~~~ivtGP~-----MP~---~~r~~l~~~A---~~~p~i~I~~f-- 284 (400)
T COG4671 220 FDILVSVGGGADGAELIETALAAAQLLAGLNH--KWLIVTGPF-----MPE---AQRQKLLASA---PKRPHISIFEF-- 284 (400)
T ss_pred ceEEEecCCChhhHHHHHHHHHHhhhCCCCCc--ceEEEeCCC-----CCH---HHHHHHHHhc---ccCCCeEEEEh--
Confidence 5677777752 233334444445444432222 354555532 221 1233333333 33467888887
Q ss_pred CCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccc--ccc-----cCCceEEeCCC--CHHHHH
Q 002665 395 QSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVD--IHR-----VLDNGLLVDPH--DQQSIA 465 (895)
Q Consensus 395 ~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~e--iv~-----~~~~g~lv~p~--d~~~la 465 (895)
..++..|+..| +..|.- -|+ .+..|-+.+|+|-+.-..+...| ++. +.+-.=+..|. .++.++
T Consensus 285 ~~~~~~ll~gA----~~vVSm---~GY-NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~La 356 (400)
T COG4671 285 RNDFESLLAGA----RLVVSM---GGY-NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTPQNLA 356 (400)
T ss_pred hhhHHHHHHhh----heeeec---ccc-hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCChHHHH
Confidence 68999999999 887742 333 46779999999988766443332 221 11111122233 467788
Q ss_pred HHHHHHhh
Q 002665 466 DALLKLVS 473 (895)
Q Consensus 466 ~ai~~ll~ 473 (895)
++|..+++
T Consensus 357 ~al~~~l~ 364 (400)
T COG4671 357 DALKAALA 364 (400)
T ss_pred HHHHhccc
Confidence 88877776
No 179
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=97.76 E-value=2.5e-05 Score=78.17 Aligned_cols=185 Identities=12% Similarity=0.065 Sum_probs=93.9
Q ss_pred HHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHH-hCCCCCCCCCEEEeCCCceEecCCCCCCCCCCCCcccCcchhhhh
Q 002665 630 KKVVEAAGKDNSAGFIGFVLSTALTILELHSLLV-SGGLSPLAFDAFICNSGSELYYPSSSTEDNHGLPFLVDLDYRFHT 708 (895)
Q Consensus 630 ~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~-~l~l~~~~~d~~I~~nGa~I~~~~~~~~~~~~~~~~~d~~~~~~~ 708 (895)
.++|++|++. +.|+|+||-.+.-+.+-+. ..-+ ..+|++-+.||+..|..+ .......+...+
T Consensus 2 ~~~L~~L~~~-----~~vgvVgGsd~~k~~eQl~~~~~~--~~fdy~f~enG~~~y~~~---------~~~~~~~~~~~l 65 (220)
T PF03332_consen 2 AELLQKLRKK-----VPVGVVGGSDLPKIQEQLGGDDVL--DNFDYVFPENGLVAYKNG---------ELIWSQSIAEFL 65 (220)
T ss_dssp HHHHHHHHTT-----SEEEEEESS-HHHHHHHHSTTTHH--HH-SEEEEGGGTEEEETT---------EEEEE--HHHHH
T ss_pred HHHHHHHHhc-----CeEEEEcchhHHHHHHHHcccchH--hhCCeeecCCCCeEEECC---------CchhhHhHHHHc
Confidence 4677888876 8999999999988776553 2112 236899999999998753 122112222222
Q ss_pred ccccCcchHHHHHH---H-HhhhccCCCCccCcccccccccccceEEEEEecCCCCCc-----------CH-HHHHHHHH
Q 002665 709 EYRWGGEGLRKTLV---R-WAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMIP-----------PV-KELRKLMR 772 (895)
Q Consensus 709 ~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~-----------~~-~~l~~~l~ 772 (895)
.+ +...+++. + ........+ ...+++....+ ..+|-..+.....+ .+ +.+.+.|.
T Consensus 66 ge----e~~~~~in~~l~~~~~l~lp~k---rGtfIE~R~gm--In~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~ 136 (220)
T PF03332_consen 66 GE----EKLQKLINFCLRYISDLDLPVK---RGTFIEFRGGM--INFSPIGRNASQEERDEFDEYDKKHKIREKLVEALK 136 (220)
T ss_dssp HH----HHHHHHHHHHHHHHHT---S------S-SEEEESSE--EEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CH----HHHHHHHHHHHHHHHhCCCCcc---CCCceeecCCc--EEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHH
Confidence 22 22222221 1 111111111 11122211111 11111111111000 01 13444555
Q ss_pred hhcCeEEEE-EeeCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEeCc----CCCccccccccCcc-eEEEEcCch
Q 002665 773 IQALRCHVI-YCQNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGE----CGDTDYEGLLGGVH-KTVILKGVG 845 (895)
Q Consensus 773 ~~~~~~~~~-~s~~~~~lEI~p~g~sKg~al~~L~~~lgi~~~~viafgGD----~nn~D~~~Ml~~ag-~gVaMgNA~ 845 (895)
+...++.+. ..++...+||.|+|.+|.-+|++|.+.. . +.|.|+|| ++| | .+.+...+ .|+.|.|=.
T Consensus 137 ~~f~d~~L~~siGGqiSiDvfp~GwDKty~Lr~l~~~~---~-~~I~FfGDkt~pGGN-D-yei~~~~rt~g~~V~~p~ 209 (220)
T PF03332_consen 137 KEFPDFGLTFSIGGQISIDVFPKGWDKTYCLRHLEDEG---F-DEIHFFGDKTFPGGN-D-YEIFEDPRTIGHTVTSPE 209 (220)
T ss_dssp HHTCCCSEEEEEETTTEEEEEETT-SGGGGGGGTTTTT-----SEEEEEESS-STTST-T-HHHHHSTTSEEEE-SSHH
T ss_pred HHCCCCceEEecCCceEEccccCCccHHHHHHHHHhcc---c-ceEEEEehhccCCCC-C-ceeeecCCccEEEeCCHH
Confidence 544443333 3344568999999999999999997743 2 35666777 568 8 89987654 588886544
No 180
>PRK10444 UMP phosphatase; Provisional
Probab=97.74 E-value=0.00048 Score=72.68 Aligned_cols=66 Identities=9% Similarity=0.008 Sum_probs=50.2
Q ss_pred EEEEEEecCCC--ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHH---HHHhCCCCCCCCCEEEeCCCc
Q 002665 611 YVFVIAADCDT--TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHS---LLVSGGLSPLAFDAFICNSGS 681 (895)
Q Consensus 611 kli~~DiDGTL--~~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~---~l~~l~l~~~~~d~~I~~nGa 681 (895)
|+++||+|||| ...+.+.+.+++++|+++| +.|+++|+|+.....+ -++.+|++. .++-++++..+
T Consensus 2 ~~v~~DlDGtL~~~~~~~p~a~~~l~~L~~~g----~~~~~~Tn~~~~~~~~~~~~l~~~G~~~-~~~~i~ts~~~ 72 (248)
T PRK10444 2 KNVICDIDGVLMHDNVAVPGAAEFLHRILDKG----LPLVLLTNYPSQTGQDLANRFATAGVDV-PDSVFYTSAMA 72 (248)
T ss_pred cEEEEeCCCceEeCCeeCccHHHHHHHHHHCC----CeEEEEeCCCCCCHHHHHHHHHHcCCCC-CHhhEecHHHH
Confidence 68999999999 3567888999999999987 9999999998765544 455567753 34556665433
No 181
>PLN02764 glycosyltransferase family protein
Probab=97.72 E-value=0.052 Score=62.19 Aligned_cols=114 Identities=13% Similarity=0.116 Sum_probs=70.4
Q ss_pred EEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCc----cccc-ccCCceEEeCC---
Q 002665 387 VAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGP----VDIH-RVLDNGLLVDP--- 458 (895)
Q Consensus 387 v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~----~eiv-~~~~~g~lv~p--- 458 (895)
+.+.+++|+.++-+ .. ++++|| ..+--.+.+||+.+|+|+|+-...+- ...+ +.-+.|+.+.+
T Consensus 319 ~v~~~W~PQ~~vL~---h~--~v~~Fv----tH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~ 389 (453)
T PLN02764 319 VVWGGWVQQPLILS---HP--SVGCFV----SHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREET 389 (453)
T ss_pred cEEeCCCCHHHHhc---Cc--ccCeEE----ecCCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccC
Confidence 56678888877543 33 125676 34556789999999999999886542 2233 22345665432
Q ss_pred --CCHHHHHHHHHHHhhCH-HHHHHHHHHHHH---HH-hhCCHHHHHHHHHHHHHHhh
Q 002665 459 --HDQQSIADALLKLVSDK-QLWERCRQNGLK---NI-HQFSWPEHCKSYLSRISSCK 509 (895)
Q Consensus 459 --~d~~~la~ai~~ll~~~-~~~~~~~~~~~~---~v-~~~s~~~~a~~~~~~l~~~~ 509 (895)
-+.+++.++++++++++ ++.+++++++++ .+ +.=|-..-.+++++.+.+..
T Consensus 390 ~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~~~GSS~~~l~~lv~~~~~~~ 447 (453)
T PLN02764 390 GWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETLASPGLLTGYVDNFIESLQDLV 447 (453)
T ss_pred CccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhc
Confidence 37899999999999864 444444444443 33 23344445556666665544
No 182
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.72 E-value=8.4e-05 Score=78.06 Aligned_cols=72 Identities=15% Similarity=0.035 Sum_probs=56.9
Q ss_pred cccEEEEEEecCCCC---hhh---HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCc
Q 002665 608 RRKYVFVIAADCDTT---SDF---LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGS 681 (895)
Q Consensus 608 ~~~kli~~DiDGTL~---~~~---~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa 681 (895)
...|+|+||+||||. ..+ .+.+.++|++|+++| +.++|+|+.+...+...++.+++. ..+| .|.++|.
T Consensus 126 ~~~~~i~~D~D~TL~~~~~~v~irdp~V~EtL~eLkekG----ikLaIvTNg~Re~v~~~Le~lgL~-~yFD-vII~~g~ 199 (303)
T PHA03398 126 EIPHVIVFDLDSTLITDEEPVRIRDPFVYDSLDELKERG----CVLVLWSYGNREHVVHSLKETKLE-GYFD-IIICGGR 199 (303)
T ss_pred eeccEEEEecCCCccCCCCccccCChhHHHHHHHHHHCC----CEEEEEcCCChHHHHHHHHHcCCC-cccc-EEEECCC
Confidence 567999999999993 233 588999999999987 999999988888889999999984 1234 4566666
Q ss_pred eEec
Q 002665 682 ELYY 685 (895)
Q Consensus 682 ~I~~ 685 (895)
....
T Consensus 200 i~~k 203 (303)
T PHA03398 200 KAGE 203 (303)
T ss_pred cccc
Confidence 5554
No 183
>PLN02562 UDP-glycosyltransferase
Probab=97.70 E-value=0.046 Score=63.01 Aligned_cols=138 Identities=13% Similarity=0.131 Sum_probs=81.8
Q ss_pred CcEEEEEeCCC---CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCC
Q 002665 316 KPMILALARPD---PKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKH 392 (895)
Q Consensus 316 ~~~Il~vgrl~---~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~ 392 (895)
..+.++.|... ..+-+..++.+++.+. . .+..++..+.. ..+.+ ...++ ..+++.+.++
T Consensus 274 svvyvsfGS~~~~~~~~~~~~l~~~l~~~g----~-~fiW~~~~~~~-~~l~~----------~~~~~--~~~~~~v~~w 335 (448)
T PLN02562 274 SVIYISFGSWVSPIGESNVRTLALALEASG----R-PFIWVLNPVWR-EGLPP----------GYVER--VSKQGKVVSW 335 (448)
T ss_pred ceEEEEecccccCCCHHHHHHHHHHHHHCC----C-CEEEEEcCCch-hhCCH----------HHHHH--hccCEEEEec
Confidence 45778888753 3445667777777662 2 44334432110 01111 11111 1346777788
Q ss_pred CCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCC----ccccccc-CCceEEeCCCCHHHHHHH
Q 002665 393 HKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGG----PVDIHRV-LDNGLLVDPHDQQSIADA 467 (895)
Q Consensus 393 ~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg----~~eiv~~-~~~g~lv~p~d~~~la~a 467 (895)
+|+.++ +... +..+|| ..+--.+.+||+.+|+|+|+....+ ....+.+ -..|+-+...+.++++++
T Consensus 336 ~PQ~~i---L~h~--~v~~fv----tH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~l~~~ 406 (448)
T PLN02562 336 APQLEV---LKHQ--AVGCYL----THCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGFGQKEVEEG 406 (448)
T ss_pred CCHHHH---hCCC--ccceEE----ecCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeCCCCHHHHHHH
Confidence 877764 4444 014555 3455678999999999999977543 2223322 255676655688999999
Q ss_pred HHHHhhCHHHHHH
Q 002665 468 LLKLVSDKQLWER 480 (895)
Q Consensus 468 i~~ll~~~~~~~~ 480 (895)
|++++.+++.+++
T Consensus 407 v~~~l~~~~~r~~ 419 (448)
T PLN02562 407 LRKVMEDSGMGER 419 (448)
T ss_pred HHHHhCCHHHHHH
Confidence 9999988754443
No 184
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=97.67 E-value=0.094 Score=60.86 Aligned_cols=169 Identities=14% Similarity=0.163 Sum_probs=87.4
Q ss_pred CcEEEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEEEEecCCCch-hhhhhhHHHHHHHHHHHHHcCCCCCEEeCCC
Q 002665 316 KPMILALARPDP--KKNITTLVKAFGECRPLRELANLTLIMGNRDDID-EMSGTNAALLLSILKLIDKYDLYGQVAYPKH 392 (895)
Q Consensus 316 ~~~Il~vgrl~~--~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~-~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~ 392 (895)
..+.++.|.+.. .+-+..++.+++.+. ..+.++++...... ... .+...+. ++.. ...+.+.++
T Consensus 284 svVyvsfGS~~~~~~~~~~ela~gL~~~~-----~~flw~~~~~~~~~~~~~----~lp~~~~---~r~~-~~g~~v~~w 350 (477)
T PLN02863 284 KVVYVCFGSQVVLTKEQMEALASGLEKSG-----VHFIWCVKEPVNEESDYS----NIPSGFE---DRVA-GRGLVIRGW 350 (477)
T ss_pred ceEEEEeeceecCCHHHHHHHHHHHHhCC-----CcEEEEECCCcccccchh----hCCHHHH---HHhc-cCCEEecCC
Confidence 446677776542 233666666666542 25545665322110 000 0111111 1111 235777789
Q ss_pred CCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCC----cccc-cccCCceEEeC-----CCCHH
Q 002665 393 HKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGG----PVDI-HRVLDNGLLVD-----PHDQQ 462 (895)
Q Consensus 393 ~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg----~~ei-v~~~~~g~lv~-----p~d~~ 462 (895)
+|+.+ ++... ++++||. .+--.+.+||+++|+|+|+-...+ .... ++.-+.|+.+. ..+.+
T Consensus 351 ~PQ~~---vL~h~--~v~~fvt----H~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~~~~~~~ 421 (477)
T PLN02863 351 APQVA---ILSHR--AVGAFLT----HCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGADTVPDSD 421 (477)
T ss_pred CCHHH---HhcCC--CcCeEEe----cCCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCCCCcCHH
Confidence 87754 55542 1267763 444568899999999999977543 2222 22235676662 13678
Q ss_pred HHHHHHHHHhh-CHHHHH---HHHHHHHHHHh-hCCHHHHHHHHHHHHH
Q 002665 463 SIADALLKLVS-DKQLWE---RCRQNGLKNIH-QFSWPEHCKSYLSRIS 506 (895)
Q Consensus 463 ~la~ai~~ll~-~~~~~~---~~~~~~~~~v~-~~s~~~~a~~~~~~l~ 506 (895)
++.+++.+++. +++.++ ++++.+++.++ .=|-.+-.++|++.+.
T Consensus 422 ~v~~~v~~~m~~~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~ 470 (477)
T PLN02863 422 ELARVFMESVSENQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVV 470 (477)
T ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHH
Confidence 99999999884 433222 22222233332 2233444455555554
No 185
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=97.65 E-value=0.075 Score=61.47 Aligned_cols=120 Identities=13% Similarity=0.078 Sum_probs=73.1
Q ss_pred CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCc----cccc-ccCCceEEeCC--
Q 002665 386 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGP----VDIH-RVLDNGLLVDP-- 458 (895)
Q Consensus 386 ~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~----~eiv-~~~~~g~lv~p-- 458 (895)
.+.+.+++|+.++ +... +.+.|| ..+--.+.+||+.+|+|+|+-...+= ...+ +.-+.|+.++.
T Consensus 339 g~vv~~W~PQ~~i---L~h~--~vg~Fi----tH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~ 409 (481)
T PLN02992 339 GFVVPSWAPQAEI---LAHQ--AVGGFL----THCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDPK 409 (481)
T ss_pred CEEEeecCCHHHH---hCCc--ccCeeE----ecCchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCCC
Confidence 5777889887764 4444 013455 24555689999999999999876442 2233 24456777743
Q ss_pred --CCHHHHHHHHHHHhhCHH--HHHHH----HHHHHHHHh---hCCHHHHHHHHHHHHHHhhhcCCC
Q 002665 459 --HDQQSIADALLKLVSDKQ--LWERC----RQNGLKNIH---QFSWPEHCKSYLSRISSCKQRQPR 514 (895)
Q Consensus 459 --~d~~~la~ai~~ll~~~~--~~~~~----~~~~~~~v~---~~s~~~~a~~~~~~l~~~~~~~~~ 514 (895)
-+.++++++|.+++.+++ +.++. ++.+++.+. .=|-....+++++.+.+.+++-++
T Consensus 410 ~~~~~~~l~~av~~vm~~~~g~~~r~~a~~~~~~a~~Av~~~~GGSS~~~l~~~v~~~~~~~~~~~~ 476 (481)
T PLN02992 410 EVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDGGGVAHESLCRVTKECQRFLERVRC 476 (481)
T ss_pred CcccHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 478999999999997532 22222 333333331 123344556777777766665433
No 186
>PLN00414 glycosyltransferase family protein
Probab=97.59 E-value=0.16 Score=58.48 Aligned_cols=114 Identities=11% Similarity=0.073 Sum_probs=69.4
Q ss_pred EEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCC----ccccc-ccCCceEEeCC---
Q 002665 387 VAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGG----PVDIH-RVLDNGLLVDP--- 458 (895)
Q Consensus 387 v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg----~~eiv-~~~~~g~lv~p--- 458 (895)
..+.+++|+.++ ++.+ +.++|| ..+--.+.+||+++|+|+|+....+ ....+ +..+.|+.+..
T Consensus 314 ~vv~~w~PQ~~v---L~h~--~v~~fv----tH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~ 384 (446)
T PLN00414 314 IVWEGWVEQPLI---LSHP--SVGCFV----NHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDS 384 (446)
T ss_pred eEEeccCCHHHH---hcCC--ccceEE----ecCchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccC
Confidence 445678877764 4333 125566 3455578999999999999987543 22333 23456777642
Q ss_pred --CCHHHHHHHHHHHhhCH-HHHHHHHHHHHHHH----hhCCHHHHHHHHHHHHHHhh
Q 002665 459 --HDQQSIADALLKLVSDK-QLWERCRQNGLKNI----HQFSWPEHCKSYLSRISSCK 509 (895)
Q Consensus 459 --~d~~~la~ai~~ll~~~-~~~~~~~~~~~~~v----~~~s~~~~a~~~~~~l~~~~ 509 (895)
-+.+++++++++++.++ ++.+++++++++.- +.=.-..+.++|++.+++..
T Consensus 385 ~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~~~gg~ss~l~~~v~~~~~~~ 442 (446)
T PLN00414 385 GWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLVSPGLLSGYADKFVEALENEV 442 (446)
T ss_pred CccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhc
Confidence 47899999999999754 44455555554432 22221233566666665443
No 187
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=97.57 E-value=0.00046 Score=71.58 Aligned_cols=43 Identities=19% Similarity=0.290 Sum_probs=38.7
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEEc
Q 002665 797 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILK 842 (895)
Q Consensus 797 sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaMg 842 (895)
.|...++.++++++++++++++ +||+.+ | ++|.+.+|.+|+|+
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~i~-iGDs~~-D-i~aa~~ag~~i~~~ 194 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPENTVA-VGDGAN-D-LSMIKAAGLGIAFN 194 (219)
T ss_pred ccHHHHHHHHHHcCCCHHHEEE-EECCHH-H-HHHHHhCCCeEEeC
Confidence 4899999999999999999998 667766 8 99999999999994
No 188
>PLN02173 UDP-glucosyl transferase family protein
Probab=97.48 E-value=0.34 Score=55.65 Aligned_cols=82 Identities=15% Similarity=0.163 Sum_probs=55.2
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCC----cccccccC-CceEEeCC-
Q 002665 385 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGG----PVDIHRVL-DNGLLVDP- 458 (895)
Q Consensus 385 ~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg----~~eiv~~~-~~g~lv~p- 458 (895)
.++.+.++.|+.+ ++... +.++|| ..+-..+++|++++|+|+|+-..-+ ....+.+. +.|+-+..
T Consensus 317 ~~~~i~~W~PQ~~---iL~H~--~v~~Fv----tHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~ 387 (449)
T PLN02173 317 DKSLVLKWSPQLQ---VLSNK--AIGCFM----THCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAE 387 (449)
T ss_pred CceEEeCCCCHHH---HhCCC--ccceEE----ecCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeec
Confidence 4577779988665 45454 114555 3556679999999999999987543 22233322 45666532
Q ss_pred -----CCHHHHHHHHHHHhhCH
Q 002665 459 -----HDQQSIADALLKLVSDK 475 (895)
Q Consensus 459 -----~d~~~la~ai~~ll~~~ 475 (895)
-+.+++++++++++.++
T Consensus 388 ~~~~~~~~e~v~~av~~vm~~~ 409 (449)
T PLN02173 388 KESGIAKREEIEFSIKEVMEGE 409 (449)
T ss_pred ccCCcccHHHHHHHHHHHhcCC
Confidence 26799999999999764
No 189
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=97.40 E-value=0.28 Score=56.50 Aligned_cols=83 Identities=17% Similarity=0.222 Sum_probs=54.7
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCc----ccccccC-CceEEe-CC
Q 002665 385 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGP----VDIHRVL-DNGLLV-DP 458 (895)
Q Consensus 385 ~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~----~eiv~~~-~~g~lv-~p 458 (895)
++..+.+++|+.++ +... +.++||. .+--.+++||+++|+|+|+....+= ...+.+. +.|+.+ ..
T Consensus 324 ~~g~v~~w~PQ~~i---L~h~--~v~~fvt----H~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~ 394 (451)
T PLN02410 324 GRGYIVKWAPQKEV---LSHP--AVGGFWS----HCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGD 394 (451)
T ss_pred CCeEEEccCCHHHH---hCCC--ccCeeee----cCchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCCc
Confidence 45566689888774 4443 1155662 3334588999999999999775432 2222222 467666 33
Q ss_pred CCHHHHHHHHHHHhhCHH
Q 002665 459 HDQQSIADALLKLVSDKQ 476 (895)
Q Consensus 459 ~d~~~la~ai~~ll~~~~ 476 (895)
-+.++++++|++++.+++
T Consensus 395 ~~~~~v~~av~~lm~~~~ 412 (451)
T PLN02410 395 LDRGAVERAVKRLMVEEE 412 (451)
T ss_pred ccHHHHHHHHHHHHcCCc
Confidence 478999999999998653
No 190
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=97.38 E-value=0.017 Score=65.42 Aligned_cols=182 Identities=13% Similarity=0.107 Sum_probs=123.0
Q ss_pred hccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCC-CE
Q 002665 309 HFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYG-QV 387 (895)
Q Consensus 309 ~~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~-~v 387 (895)
..+++++..+++++++ +.|-...++.-+.+..+.-|+.-+ ++.+++++ ++....+++++++.|+.. +.
T Consensus 423 ~lglp~~avVf~c~~n--~~K~~pev~~~wmqIL~~vP~Svl-~L~~~~~~--------~~~~~~l~~la~~~Gv~~eRL 491 (620)
T COG3914 423 QLGLPEDAVVFCCFNN--YFKITPEVFALWMQILSAVPNSVL-LLKAGGDD--------AEINARLRDLAEREGVDSERL 491 (620)
T ss_pred hcCCCCCeEEEEecCC--cccCCHHHHHHHHHHHHhCCCcEE-EEecCCCc--------HHHHHHHHHHHHHcCCChhhe
Confidence 3455666555555555 567777777777777543443333 35555543 456789999999999875 89
Q ss_pred EeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcC-------CCCcccccccCC-ceEEeCCC
Q 002665 388 AYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATK-------NGGPVDIHRVLD-NGLLVDPH 459 (895)
Q Consensus 388 ~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~-------~gg~~eiv~~~~-~g~lv~p~ 459 (895)
.|.+..+.++..+-|..| |+++-|- --|-..+..|++-+|+|||+-- .|+ .++.+.+ .-++. +
T Consensus 492 ~f~p~~~~~~h~a~~~iA----DlvLDTy-PY~g~TTa~daLwm~vPVlT~~G~~FasR~~~--si~~~agi~e~vA--~ 562 (620)
T COG3914 492 RFLPPAPNEDHRARYGIA----DLVLDTY-PYGGHTTASDALWMGVPVLTRVGEQFASRNGA--SIATNAGIPELVA--D 562 (620)
T ss_pred eecCCCCCHHHHHhhchh----heeeecc-cCCCccchHHHHHhcCceeeeccHHHHHhhhH--HHHHhcCCchhhc--C
Confidence 999999999999999999 9998652 2334578999999999999743 222 2222211 22233 3
Q ss_pred CHHHHHHHHHHHhhCHHHHHHHHHHHHHHHh---hCCHHHHHHHHHHHHHHhhh
Q 002665 460 DQQSIADALLKLVSDKQLWERCRQNGLKNIH---QFSWPEHCKSYLSRISSCKQ 510 (895)
Q Consensus 460 d~~~la~ai~~ll~~~~~~~~~~~~~~~~v~---~~s~~~~a~~~~~~l~~~~~ 510 (895)
+.++..+.-.++-.|...+++.+..-.+..+ -|+....++++...|.++-+
T Consensus 563 s~~dYV~~av~~g~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~M~~ 616 (620)
T COG3914 563 SRADYVEKAVAFGSDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWGMWS 616 (620)
T ss_pred CHHHHHHHHHHhcccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHHHHH
Confidence 6666655555555577666666655555442 58999999999999988754
No 191
>PLN02554 UDP-glycosyltransferase family protein
Probab=97.37 E-value=0.31 Score=56.84 Aligned_cols=83 Identities=14% Similarity=0.091 Sum_probs=54.2
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCC----cc-cccccCCceEEeCC-
Q 002665 385 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGG----PV-DIHRVLDNGLLVDP- 458 (895)
Q Consensus 385 ~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg----~~-eiv~~~~~g~lv~p- 458 (895)
+++.+.+++|+.++-+- ..+ ++|| ..+--.+++|++.+|+|+|+....+ .. .+++.-+.|+.++.
T Consensus 342 ~~g~v~~W~PQ~~iL~H-~~v----~~Fv----tH~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~ 412 (481)
T PLN02554 342 DIGKVIGWAPQVAVLAK-PAI----GGFV----THCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKY 412 (481)
T ss_pred cCceEEeeCCHHHHhCC-ccc----Cccc----ccCccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeecc
Confidence 45566688877664321 333 5665 2444568899999999999987543 11 23344456766631
Q ss_pred ------------CCHHHHHHHHHHHhh-CHH
Q 002665 459 ------------HDQQSIADALLKLVS-DKQ 476 (895)
Q Consensus 459 ------------~d~~~la~ai~~ll~-~~~ 476 (895)
-+.++++++|+++++ +++
T Consensus 413 ~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~ 443 (481)
T PLN02554 413 WRGDLLAGEMETVTAEEIERGIRCLMEQDSD 443 (481)
T ss_pred ccccccccccCeEcHHHHHHHHHHHhcCCHH
Confidence 278899999999996 543
No 192
>PLN02210 UDP-glucosyl transferase
Probab=97.37 E-value=0.45 Score=55.00 Aligned_cols=82 Identities=13% Similarity=0.099 Sum_probs=54.1
Q ss_pred CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCc----cccccc-CCceEEeCC--
Q 002665 386 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGP----VDIHRV-LDNGLLVDP-- 458 (895)
Q Consensus 386 ~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~----~eiv~~-~~~g~lv~p-- 458 (895)
+..+.+++|+.+ ++..+ +.++||- .+--.+.+|++++|+|+|+-...+= ...+.+ -+.|+.++.
T Consensus 325 ~g~v~~w~PQ~~---iL~h~--~vg~Fit----H~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~ 395 (456)
T PLN02210 325 QGVVLEWSPQEK---ILSHM--AISCFVT----HCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDA 395 (456)
T ss_pred CeEEEecCCHHH---HhcCc--CcCeEEe----eCCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccc
Confidence 334568887765 55555 1136552 3334578899999999999876442 223333 467777742
Q ss_pred ----CCHHHHHHHHHHHhhCHH
Q 002665 459 ----HDQQSIADALLKLVSDKQ 476 (895)
Q Consensus 459 ----~d~~~la~ai~~ll~~~~ 476 (895)
-+.+++++++++++.+++
T Consensus 396 ~~~~~~~~~l~~av~~~m~~~~ 417 (456)
T PLN02210 396 VDGELKVEEVERCIEAVTEGPA 417 (456)
T ss_pred cCCcCCHHHHHHHHHHHhcCch
Confidence 378899999999997643
No 193
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=97.36 E-value=0.0089 Score=61.80 Aligned_cols=138 Identities=20% Similarity=0.318 Sum_probs=81.3
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCC
Q 002665 315 RKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHK 394 (895)
Q Consensus 315 ~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~ 394 (895)
-+-++++.|.-|+ ||+ .++.++.+.+ ...++.+|+|..... .. .+-+++...+++.++-.
T Consensus 158 ~r~ilI~lGGsDp-k~l--t~kvl~~L~~--~~~nl~iV~gs~~p~----------l~---~l~k~~~~~~~i~~~~~-- 217 (318)
T COG3980 158 KRDILITLGGSDP-KNL--TLKVLAELEQ--KNVNLHIVVGSSNPT----------LK---NLRKRAEKYPNINLYID-- 217 (318)
T ss_pred hheEEEEccCCCh-hhh--HHHHHHHhhc--cCeeEEEEecCCCcc----------hh---HHHHHHhhCCCeeeEec--
Confidence 4457788887766 543 3444555532 225788889855421 12 23333444566666555
Q ss_pred CCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEE----EcCCCCcccccccCCceEEeCC---CCHHHHHHH
Q 002665 395 QSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIV----ATKNGGPVDIHRVLDNGLLVDP---HDQQSIADA 467 (895)
Q Consensus 395 ~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVv----at~~gg~~eiv~~~~~g~lv~p---~d~~~la~a 467 (895)
.++++.|+..| |.++.. -|.++.|++..|+|.+ +.+--..+...+ .-|+..+- .........
T Consensus 218 ~~dma~LMke~----d~aI~A-----aGstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~--~lg~~~~l~~~l~~~~~~~~ 286 (318)
T COG3980 218 TNDMAELMKEA----DLAISA-----AGSTLYEALLLGVPSLVLPLAENQIATAKEFE--ALGIIKQLGYHLKDLAKDYE 286 (318)
T ss_pred chhHHHHHHhc----chheec-----cchHHHHHHHhcCCceEEeeeccHHHHHHHHH--hcCchhhccCCCchHHHHHH
Confidence 47899999999 998854 5899999999999932 333222222221 12333222 245566666
Q ss_pred HHHHhhCHHHHHHHHH
Q 002665 468 LLKLVSDKQLWERCRQ 483 (895)
Q Consensus 468 i~~ll~~~~~~~~~~~ 483 (895)
+.++.+|...+.....
T Consensus 287 ~~~i~~d~~~rk~l~~ 302 (318)
T COG3980 287 ILQIQKDYARRKNLSF 302 (318)
T ss_pred HHHhhhCHHHhhhhhh
Confidence 7777777776555443
No 194
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=97.31 E-value=0.033 Score=59.04 Aligned_cols=168 Identities=12% Similarity=0.049 Sum_probs=106.7
Q ss_pred cEEEEEe-CCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCE-EeCCCCC
Q 002665 317 PMILALA-RPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQV-AYPKHHK 394 (895)
Q Consensus 317 ~~Il~vg-rl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v-~~~g~~~ 394 (895)
++.+-+| .-|++.+....|+++.+.. ...-++.+-+|-+.. .++|..++.+...++--.+++ .+...+|
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~--~~~v~ii~PlsYp~g-------n~~Yi~~V~~~~~~lF~~~~~~~L~e~l~ 216 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQF--GDNVKIIVPMGYPAN-------NQAYIEEVRQAGLALFGAENFQILTEKLP 216 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHh--CCCeEEEEECCcCCC-------CHHHHHHHHHHHHHhcCcccEEehhhhCC
Confidence 4444444 5778899988888887763 233333334455321 245667777777776553444 4566889
Q ss_pred CCcHHHHHHHhhcCCcEEEecCC-CCCCChHHHHHHHcCCCEEEcC-CCCcccccccCCceEEeCCCC--HHHHHHHHHH
Q 002665 395 QSDVPDIYRLAAKTKGVFINPAF-IEPFGLTLIEAAAYGLPIVATK-NGGPVDIHRVLDNGLLVDPHD--QQSIADALLK 470 (895)
Q Consensus 395 ~~el~~ly~~a~~~~Dv~v~ps~-~eg~gl~~~Ea~a~G~PVvat~-~gg~~eiv~~~~~g~lv~p~d--~~~la~ai~~ 470 (895)
++|..++++.| |+.++--. -.|+|..+ =.+..|+||+.+. ++-..++.+.+ --++++..+ ...+.+
T Consensus 217 f~eYl~lL~~~----Dl~~f~~~RQQgiGnl~-lLi~~G~~v~l~r~n~fwqdl~e~g-v~Vlf~~d~L~~~~v~e---- 286 (322)
T PRK02797 217 FDDYLALLRQC----DLGYFIFARQQGIGTLC-LLIQLGKPVVLSRDNPFWQDLTEQG-LPVLFTGDDLDEDIVRE---- 286 (322)
T ss_pred HHHHHHHHHhC----CEEEEeechhhHHhHHH-HHHHCCCcEEEecCCchHHHHHhCC-CeEEecCCcccHHHHHH----
Confidence 99999999999 99998754 56777554 4678899998875 67677765432 334444332 222222
Q ss_pred HhhCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhhh
Q 002665 471 LVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCKQ 510 (895)
Q Consensus 471 ll~~~~~~~~~~~~~~~~v~~~s~~~~a~~~~~~l~~~~~ 510 (895)
.++++...-++.+. |+-+...+.+.++|+....
T Consensus 287 ------~~rql~~~dk~~I~-Ff~pn~~~~W~~~l~~~~g 319 (322)
T PRK02797 287 ------AQRQLASVDKNIIA-FFSPNYLQGWRNALAIAAG 319 (322)
T ss_pred ------HHHHHHhhCcceee-ecCHhHHHHHHHHHHHhhC
Confidence 12233333334444 8889999999888886654
No 195
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=97.31 E-value=0.51 Score=53.88 Aligned_cols=91 Identities=10% Similarity=0.117 Sum_probs=58.6
Q ss_pred CCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCC-CCcccccccCC-ceEEeC--CCCHHHHH
Q 002665 390 PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN-GGPVDIHRVLD-NGLLVD--PHDQQSIA 465 (895)
Q Consensus 390 ~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~-gg~~eiv~~~~-~g~lv~--p~d~~~la 465 (895)
....+..|+..+++.| |+++-.=+ =.++=|++.|+|+|+-.. .=...++...+ ..++++ ..+.+++.
T Consensus 313 ~~~~~~~e~~~iIs~~----dl~ig~Rl-----Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~lg~~~~~~~~~~l~~~~Li 383 (426)
T PRK10017 313 MDELNDLEMGKILGAC----ELTVGTRL-----HSAIISMNFGTPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQ 383 (426)
T ss_pred cCCCChHHHHHHHhhC----CEEEEecc-----hHHHHHHHcCCCEEEeeehHHHHHHHHHcCCccEEechhhCCHHHHH
Confidence 3444556888999999 99873311 156788999999998653 21222322212 233343 44678899
Q ss_pred HHHHHHhhCHHHHHHHHHHHHHHH
Q 002665 466 DALLKLVSDKQLWERCRQNGLKNI 489 (895)
Q Consensus 466 ~ai~~ll~~~~~~~~~~~~~~~~v 489 (895)
+.+.+++++.++.++..+...+..
T Consensus 384 ~~v~~~~~~r~~~~~~l~~~v~~~ 407 (426)
T PRK10017 384 AMVADTLGQLPALNARLAEAVSRE 407 (426)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHH
Confidence 999999998877666555554444
No 196
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=97.29 E-value=0.028 Score=60.36 Aligned_cols=143 Identities=12% Similarity=0.049 Sum_probs=91.6
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEe-CCCC
Q 002665 315 RKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAY-PKHH 393 (895)
Q Consensus 315 ~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~-~g~~ 393 (895)
++..|+---.-+++.+....++++.+.. ....++.+-+|-+... ++|..++.+...++--..++.. ..++
T Consensus 184 ~~ltILvGNSgd~sNnHieaL~~L~~~~--~~~~kIivPLsYg~~n-------~~Yi~~V~~~~~~lF~~~~~~iL~e~m 254 (360)
T PF07429_consen 184 GKLTILVGNSGDPSNNHIEALEALKQQF--GDDVKIIVPLSYGANN-------QAYIQQVIQAGKELFGAENFQILTEFM 254 (360)
T ss_pred CceEEEEcCCCCCCccHHHHHHHHHHhc--CCCeEEEEECCCCCch-------HHHHHHHHHHHHHhcCccceeEhhhhC
Confidence 3444554445778888888888887642 2333443445655432 3456677777777655456654 5699
Q ss_pred CCCcHHHHHHHhhcCCcEEEecCC-CCCCChHHHHHHHcCCCEEEcCC-CCcccccccCCceEEe--CCCCHHHHHHHHH
Q 002665 394 KQSDVPDIYRLAAKTKGVFINPAF-IEPFGLTLIEAAAYGLPIVATKN-GGPVDIHRVLDNGLLV--DPHDQQSIADALL 469 (895)
Q Consensus 394 ~~~el~~ly~~a~~~~Dv~v~ps~-~eg~gl~~~Ea~a~G~PVvat~~-gg~~eiv~~~~~g~lv--~p~d~~~la~ai~ 469 (895)
|++|..++++.| |+.++... -.|+|.. .=.+.+|+||+.+.. +-..++.+. .--+++ +.-|...+.++=+
T Consensus 255 pf~eYl~lL~~c----Dl~if~~~RQQgiGnI-~lLl~~G~~v~L~~~np~~~~l~~~-~ipVlf~~d~L~~~~v~ea~r 328 (360)
T PF07429_consen 255 PFDEYLALLSRC----DLGIFNHNRQQGIGNI-CLLLQLGKKVFLSRDNPFWQDLKEQ-GIPVLFYGDELDEALVREAQR 328 (360)
T ss_pred CHHHHHHHHHhC----CEEEEeechhhhHhHH-HHHHHcCCeEEEecCChHHHHHHhC-CCeEEeccccCCHHHHHHHHH
Confidence 999999999999 99999976 5677754 447889999988774 445555433 223333 3345555555544
Q ss_pred HHh
Q 002665 470 KLV 472 (895)
Q Consensus 470 ~ll 472 (895)
++.
T Consensus 329 ql~ 331 (360)
T PF07429_consen 329 QLA 331 (360)
T ss_pred HHh
Confidence 444
No 197
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=97.23 E-value=0.014 Score=62.21 Aligned_cols=85 Identities=15% Similarity=0.148 Sum_probs=56.4
Q ss_pred CCcEEEeccC-CchHHHHHHhccCCCCEEEEeCCCchhhH-HHHHHhCCC-ChhhhhhH-hhHHHhHHHHHhhccccCEE
Q 002665 147 WPVAIHGHYA-DAGDAAALLSGALNVPMVFTGHSLGRDKL-EQLLKQGRL-SRDEINTT-YKIMRRIEAEELSLDASEIV 222 (895)
Q Consensus 147 ~pDvIh~h~~-~~~~~~~~~~~~~~ip~v~t~H~~~~~~~-~~~~~~g~~-~~~~~~~~-~~~~~r~~~e~~~~~~ad~v 222 (895)
+.||+|+... .++++++..+...|+|+++|-|+...... ..+....+. ....+... .+++..+ -+.+++.||.|
T Consensus 172 ~advyHsvstGyAgl~g~~~k~~~g~P~lLTEHGIY~RER~~ei~~a~w~~~~~~~r~~wi~~f~~l--~~~~Y~~Ad~I 249 (268)
T PF11997_consen 172 KADVYHSVSTGYAGLLGALAKYRYGRPFLLTEHGIYTREREIEILQADWIWESPYVRDLWIRFFESL--SRLAYRAADRI 249 (268)
T ss_pred CCCEEecCCccHHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccccchHHHHHHHHHHHHHH--HHHHHHhhCee
Confidence 4799999876 67888999999999999999999855443 333333332 01122211 2233332 45689999999
Q ss_pred EecCHHHHHHH
Q 002665 223 ITSTRQEIEEQ 233 (895)
Q Consensus 223 i~~s~~~~~~~ 233 (895)
++..+...+.+
T Consensus 250 ~~l~~~n~~~q 260 (268)
T PF11997_consen 250 TPLYEYNREWQ 260 (268)
T ss_pred cccchhhHHHH
Confidence 99998655443
No 198
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=97.22 E-value=0.0005 Score=64.70 Aligned_cols=52 Identities=15% Similarity=0.042 Sum_probs=43.4
Q ss_pred EEEEEEecCCCChh---------------hHHHHHHHHHHHhccCCCCceEEEEEcCC-CHHHHHHHHHhCC
Q 002665 611 YVFVIAADCDTTSD---------------FLEIIKKVVEAAGKDNSAGFIGFVLSTAL-TILELHSLLVSGG 666 (895)
Q Consensus 611 kli~~DiDGTL~~~---------------~~~~~~~~l~~l~~~g~~~~i~vviaTGR-~~~~~~~~l~~l~ 666 (895)
|+|++|+||||... ..+.+.+.|+.|+++| +.++|+|++ +...+...++..+
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~g----~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKNG----FLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHCC----eEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999321 4678999999999986 999999999 7777777777766
No 199
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=97.20 E-value=0.0043 Score=60.76 Aligned_cols=144 Identities=17% Similarity=0.187 Sum_probs=74.7
Q ss_pred CCcEEEEecCCCCCccccccccCCCchhHHHHHHHHH--HHHHHHhhhhcCCCCCCCCcEEEecc-CCchHHHHHHhccC
Q 002665 93 SGAYIIRIPFGPKDKYVQKELLWPHIPEFVDAALTHI--IQISKVLGEQVGSGQPIWPVAIHGHY-ADAGDAAALLSGAL 169 (895)
Q Consensus 93 ~g~~i~r~~~~~~~~~l~k~~~~~~l~~f~~~~~~~~--~~~~~~l~~~~~~~~~~~pDvIh~h~-~~~~~~~~~~~~~~ 169 (895)
+|++++++...+. ......++...|...+++-. .+....|++ +++.||||.+|. |..++ .++...
T Consensus 19 ~GV~~~~y~~~~~----~~~~~~~~~~~~e~~~~rg~av~~a~~~L~~-----~Gf~PDvI~~H~GWGe~L---flkdv~ 86 (171)
T PF12000_consen 19 PGVRVVRYRPPRG----PTPGTHPYVRDFEAAVLRGQAVARAARQLRA-----QGFVPDVIIAHPGWGETL---FLKDVF 86 (171)
T ss_pred CCcEEEEeCCCCC----CCCCCCcccccHHHHHHHHHHHHHHHHHHHH-----cCCCCCEEEEcCCcchhh---hHHHhC
Confidence 3888887765322 23334566666655444322 223333333 258899999996 43332 333333
Q ss_pred -CCCEEEEeC----CCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCHHHHHHHHHHhcCCChHH
Q 002665 170 -NVPMVFTGH----SLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVL 244 (895)
Q Consensus 170 -~ip~v~t~H----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~~~~~~~~~~y~~~~~~~ 244 (895)
++|++...- ..+.+. .....+ ........+...+-......+..||..++.|.-. ...|+..-.
T Consensus 87 P~a~li~Y~E~~y~~~g~d~----~FDpe~-p~~~~~~~~~r~rN~~~l~~l~~~D~~isPT~wQ----~~~fP~~~r-- 155 (171)
T PF12000_consen 87 PDAPLIGYFEFYYRASGADV----GFDPEF-PPSLDDRARLRMRNAHNLLALEQADAGISPTRWQ----RSQFPAEFR-- 155 (171)
T ss_pred CCCcEEEEEEEEecCCCCcC----CCCCCC-CCCHHHHHHHHHHhHHHHHHHHhCCcCcCCCHHH----HHhCCHHHH--
Confidence 777765321 111110 000000 0111122222222123445788999999999854 344443211
Q ss_pred HHHHHHhHhccccccCCCCCCeEEeCCCCcCCCc
Q 002665 245 ERKLRARIKRGVSCHGRFMPRMVVIPPGIEFHHI 278 (895)
Q Consensus 245 ~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~~~f 278 (895)
.|+.||.-|||++.+
T Consensus 156 -------------------~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 156 -------------------SKISVIHDGIDTDRF 170 (171)
T ss_pred -------------------cCcEEeecccchhhc
Confidence 299999999999875
No 200
>PLN02167 UDP-glycosyltransferase family protein
Probab=97.20 E-value=0.75 Score=53.58 Aligned_cols=134 Identities=14% Similarity=0.169 Sum_probs=75.7
Q ss_pred CcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCc-----hhhhhhhHHHHHHHHHHHHHcCCCCCEE
Q 002665 316 KPMILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDDI-----DEMSGTNAALLLSILKLIDKYDLYGQVA 388 (895)
Q Consensus 316 ~~~Il~vgrl~--~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~-----~~l~~~~~~~~~~i~~~~~~~~l~~~v~ 388 (895)
..+.++.|.+. ..+-+..++.+++.+. ..+..+++..... ..+. ..+ .++. .++..
T Consensus 281 svvyvsfGS~~~~~~~~~~ela~~l~~~~-----~~flw~~~~~~~~~~~~~~~lp-------~~~---~er~--~~rg~ 343 (475)
T PLN02167 281 SVVFLCFGSLGSLPAPQIKEIAQALELVG-----CRFLWSIRTNPAEYASPYEPLP-------EGF---MDRV--MGRGL 343 (475)
T ss_pred ceEEEeecccccCCHHHHHHHHHHHHhCC-----CcEEEEEecCcccccchhhhCC-------hHH---HHHh--ccCee
Confidence 45667777753 2344666666666652 2454455532110 0111 111 1111 13445
Q ss_pred eCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcc-----cccccCCceEEeCC-----
Q 002665 389 YPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV-----DIHRVLDNGLLVDP----- 458 (895)
Q Consensus 389 ~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~-----eiv~~~~~g~lv~p----- 458 (895)
+.+++|+.+ ++... ++++||- .+--.+.+||+++|+|+|+-...+=+ -+++.-+.|+.+..
T Consensus 344 v~~w~PQ~~---iL~h~--~vg~fvt----H~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~ 414 (475)
T PLN02167 344 VCGWAPQVE---ILAHK--AIGGFVS----HCGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSA 414 (475)
T ss_pred eeccCCHHH---HhcCc--ccCeEEe----eCCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeecccccc
Confidence 568877665 45443 1256662 33345889999999999997754321 12333456776642
Q ss_pred ----CCHHHHHHHHHHHhhCH
Q 002665 459 ----HDQQSIADALLKLVSDK 475 (895)
Q Consensus 459 ----~d~~~la~ai~~ll~~~ 475 (895)
-+.++++++|++++.++
T Consensus 415 ~~~~~~~~~l~~av~~~m~~~ 435 (475)
T PLN02167 415 YGEIVKADEIAGAVRSLMDGE 435 (475)
T ss_pred cCCcccHHHHHHHHHHHhcCC
Confidence 26889999999999754
No 201
>PLN00164 glucosyltransferase; Provisional
Probab=97.19 E-value=0.63 Score=54.21 Aligned_cols=92 Identities=13% Similarity=0.152 Sum_probs=56.4
Q ss_pred EEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCC----ccc-ccccCCceEEeCC---
Q 002665 387 VAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGG----PVD-IHRVLDNGLLVDP--- 458 (895)
Q Consensus 387 v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg----~~e-iv~~~~~g~lv~p--- 458 (895)
+.+.++.|+.+ ++..+ +..+||. .+--.+.+|++.+|+|+|+-..-+ ... +++.-+.|+.++.
T Consensus 341 ~~v~~w~PQ~~---iL~h~--~vg~fvt----H~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~ 411 (480)
T PLN00164 341 LVWPTWAPQKE---ILAHA--AVGGFVT----HCGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRK 411 (480)
T ss_pred eEEeecCCHHH---HhcCc--ccCeEEe----ecccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccc
Confidence 55667877765 44454 0134552 333458899999999999977533 222 2233356776642
Q ss_pred ----CCHHHHHHHHHHHhhCHH-HHHHHHHHHHH
Q 002665 459 ----HDQQSIADALLKLVSDKQ-LWERCRQNGLK 487 (895)
Q Consensus 459 ----~d~~~la~ai~~ll~~~~-~~~~~~~~~~~ 487 (895)
-+.++++++|.+++.+++ +.+.+++++++
T Consensus 412 ~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~ 445 (480)
T PLN00164 412 RDNFVEAAELERAVRSLMGGGEEEGRKAREKAAE 445 (480)
T ss_pred cCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHH
Confidence 267999999999997643 23444444433
No 202
>PRK10671 copA copper exporting ATPase; Provisional
Probab=97.19 E-value=0.002 Score=80.47 Aligned_cols=56 Identities=11% Similarity=0.086 Sum_probs=47.2
Q ss_pred cccEEEEEEecCCC------ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 608 RRKYVFVIAADCDT------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 608 ~~~kli~~DiDGTL------~~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
.....+++..||++ .....+..+++++.|++.| ++++++||.+...+..+++++|+
T Consensus 628 ~g~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L~~~g----i~v~~~Tgd~~~~a~~ia~~lgi 689 (834)
T PRK10671 628 QGATPVLLAVDGKAAALLAIRDPLRSDSVAALQRLHKAG----YRLVMLTGDNPTTANAIAKEAGI 689 (834)
T ss_pred CCCeEEEEEECCEEEEEEEccCcchhhHHHHHHHHHHCC----CeEEEEcCCCHHHHHHHHHHcCC
Confidence 34577888889886 3567777889999999987 99999999999999999998887
No 203
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.16 E-value=0.042 Score=57.78 Aligned_cols=138 Identities=17% Similarity=0.246 Sum_probs=80.7
Q ss_pred hhhhhccCCCCCcEEEE-E-----eCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHH
Q 002665 305 SEIMHFFSNPRKPMILA-L-----ARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLI 378 (895)
Q Consensus 305 ~~~~~~~~~~~~~~Il~-v-----grl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~ 378 (895)
+.+++++...+.+.|+. . .-....+++..+.++++.|.+ .. +|+-.++.. ..+.+
T Consensus 171 evlkeLgl~~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k---~g---iV~ipr~~~-------------~~eif 231 (346)
T COG1817 171 EVLKELGLEEGETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKK---YG---IVLIPREKE-------------QAEIF 231 (346)
T ss_pred HHHHHcCCCCCCceEEEeeccccceeeccccchhhHHHHHHHHHh---Cc---EEEecCchh-------------HHHHH
Confidence 45667777776665543 1 123346778788888888843 12 333333321 11233
Q ss_pred HHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCC---CcccccccCCceEE
Q 002665 379 DKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNG---GPVDIHRVLDNGLL 455 (895)
Q Consensus 379 ~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~g---g~~eiv~~~~~g~l 455 (895)
+.+. ++..+... -+.+.-+|.+ +.++ .+.|.-.-||+..|+|.|++..| +..+... ..|++
T Consensus 232 e~~~---n~i~pk~~-vD~l~Llyya-----~lvi-----g~ggTMarEaAlLGtpaIs~~pGkll~vdk~li--e~G~~ 295 (346)
T COG1817 232 EGYR---NIIIPKKA-VDTLSLLYYA-----TLVI-----GAGGTMAREAALLGTPAISCYPGKLLAVDKYLI--EKGLL 295 (346)
T ss_pred hhhc---cccCCccc-ccHHHHHhhh-----heee-----cCCchHHHHHHHhCCceEEecCCccccccHHHH--hcCce
Confidence 3332 22222221 1234444544 4554 45577789999999999999965 2333322 46999
Q ss_pred eCCCCHHHHHHHHHHHhhCHHH
Q 002665 456 VDPHDQQSIADALLKLVSDKQL 477 (895)
Q Consensus 456 v~p~d~~~la~ai~~ll~~~~~ 477 (895)
++..|+.++.+...+.|.++..
T Consensus 296 ~~s~~~~~~~~~a~~~l~~~~~ 317 (346)
T COG1817 296 YHSTDEIAIVEYAVRNLKYRRL 317 (346)
T ss_pred eecCCHHHHHHHHHHHhhchhh
Confidence 9999998888877777766643
No 204
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=97.14 E-value=0.0055 Score=77.67 Aligned_cols=42 Identities=10% Similarity=0.090 Sum_probs=39.1
Q ss_pred ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 622 TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 622 ~~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
.+.+.+.+++++++++++| +.++++|||++..+..+.+++|+
T Consensus 566 ~Dplr~~v~~aI~~l~~~G----i~v~~~TGd~~~ta~~ia~~~gi 607 (997)
T TIGR01106 566 IDPPRAAVPDAVGKCRSAG----IKVIMVTGDHPITAKAIAKGVGI 607 (997)
T ss_pred cCCChHHHHHHHHHHHHCC----CeEEEECCCCHHHHHHHHHHcCC
Confidence 3678889999999999997 99999999999999999999998
No 205
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=97.13 E-value=0.00024 Score=75.58 Aligned_cols=64 Identities=11% Similarity=-0.012 Sum_probs=50.8
Q ss_pred EEEEEEecCCCC--hh----hHHHHHHHHHHHhccCCCCceEEEEEcCCCHH---HHHHHHHhCCCCCCCCCEEEeCC
Q 002665 611 YVFVIAADCDTT--SD----FLEIIKKVVEAAGKDNSAGFIGFVLSTALTIL---ELHSLLVSGGLSPLAFDAFICNS 679 (895)
Q Consensus 611 kli~~DiDGTL~--~~----~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~---~~~~~l~~l~l~~~~~d~~I~~n 679 (895)
|+++||+||||. +. +.+.+.+++++|+++| +.|+++|||+.. .+.+.++++|++. .++-++++.
T Consensus 2 k~i~~D~DGtl~~~~~~~~~~~~~a~~al~~l~~~G----~~~~~~Tn~~~~~~~~~~~~l~~~g~~~-~~~~i~ts~ 74 (257)
T TIGR01458 2 KGVLLDISGVLYISDAKSGVAVPGSQEAVKRLRGAS----VKVRFVTNTTKESKQDLLERLQRLGFDI-SEDEVFTPA 74 (257)
T ss_pred CEEEEeCCCeEEeCCCcccCcCCCHHHHHHHHHHCC----CeEEEEECCCCCCHHHHHHHHHHcCCCC-CHHHeEcHH
Confidence 689999999993 33 7889999999999987 999999997555 5777888888863 455566654
No 206
>PLN02555 limonoid glucosyltransferase
Probab=97.05 E-value=1 Score=52.32 Aligned_cols=93 Identities=18% Similarity=0.166 Sum_probs=58.5
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCC----cccccccC-CceEEeC--
Q 002665 385 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGG----PVDIHRVL-DNGLLVD-- 457 (895)
Q Consensus 385 ~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg----~~eiv~~~-~~g~lv~-- 457 (895)
+++.+.+++|+.++-.- ..+ ++||- .+--.+.+||+.+|+|+|+...-+ ....+.+. +.|+.+.
T Consensus 337 ~~g~v~~W~PQ~~iL~H-~~v----~~Fvt----H~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~ 407 (480)
T PLN02555 337 DKGKIVQWCPQEKVLAH-PSV----ACFVT----HCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRG 407 (480)
T ss_pred CceEEEecCCHHHHhCC-Ccc----CeEEe----cCCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCC
Confidence 46677788887664332 334 67762 444568899999999999987543 22222222 5676662
Q ss_pred -----CCCHHHHHHHHHHHhhCHHHHHHHHHHHHH
Q 002665 458 -----PHDQQSIADALLKLVSDKQLWERCRQNGLK 487 (895)
Q Consensus 458 -----p~d~~~la~ai~~ll~~~~~~~~~~~~~~~ 487 (895)
.-+.++++++|++++.+++ .+++++++++
T Consensus 408 ~~~~~~v~~~~v~~~v~~vm~~~~-g~~~r~ra~~ 441 (480)
T PLN02555 408 EAENKLITREEVAECLLEATVGEK-AAELKQNALK 441 (480)
T ss_pred ccccCcCcHHHHHHHHHHHhcCch-HHHHHHHHHH
Confidence 1267899999999997542 2334444433
No 207
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=97.04 E-value=0.067 Score=59.57 Aligned_cols=145 Identities=18% Similarity=0.242 Sum_probs=86.1
Q ss_pred CCCCCcEE-EEEe-CCCCC-CCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEE
Q 002665 312 SNPRKPMI-LALA-RPDPK-KNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVA 388 (895)
Q Consensus 312 ~~~~~~~I-l~vg-rl~~~-Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~ 388 (895)
.++++++| +.-| |-.+. +.+..++++++.+.+. .+++.+++...+.. ....+.......+....+.
T Consensus 180 l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~--~p~l~fvvp~a~~~---------~~~~i~~~~~~~~~~~~~~ 248 (373)
T PF02684_consen 180 LDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQ--RPDLQFVVPVAPEV---------HEELIEEILAEYPPDVSIV 248 (373)
T ss_pred CCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHh--CCCeEEEEecCCHH---------HHHHHHHHHHhhCCCCeEE
Confidence 45666654 4444 44333 4558889999998654 45666555443321 1122333333333322232
Q ss_pred eCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcC-CCCcc----------------cccccCC
Q 002665 389 YPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATK-NGGPV----------------DIHRVLD 451 (895)
Q Consensus 389 ~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~-~gg~~----------------eiv~~~~ 451 (895)
.. ..+-.++++.| |+.+.. .|.+.+|++..|+|.|..- ..... -++.+..
T Consensus 249 ~~----~~~~~~~m~~a----d~al~~-----SGTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~ 315 (373)
T PF02684_consen 249 II----EGESYDAMAAA----DAALAA-----SGTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGRE 315 (373)
T ss_pred Ec----CCchHHHHHhC----cchhhc-----CCHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCC
Confidence 22 34678899999 999977 4999999999999998754 32211 1111100
Q ss_pred --ceEEeCCCCHHHHHHHHHHHhhCHHHHHH
Q 002665 452 --NGLLVDPHDQQSIADALLKLVSDKQLWER 480 (895)
Q Consensus 452 --~g~lv~p~d~~~la~ai~~ll~~~~~~~~ 480 (895)
.=++-+.-+++.+++++..+++|++.++.
T Consensus 316 v~PEliQ~~~~~~~i~~~~~~ll~~~~~~~~ 346 (373)
T PF02684_consen 316 VVPELIQEDATPENIAAELLELLENPEKRKK 346 (373)
T ss_pred cchhhhcccCCHHHHHHHHHHHhcCHHHHHH
Confidence 01222345899999999999998876443
No 208
>PLN02645 phosphoglycolate phosphatase
Probab=97.00 E-value=0.0009 Score=73.34 Aligned_cols=67 Identities=13% Similarity=0.117 Sum_probs=51.2
Q ss_pred cccEEEEEEecCCC--ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCC---HHHHHHHHHhCCCCCCCCCEEEeCC
Q 002665 608 RRKYVFVIAADCDT--TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALT---ILELHSLLVSGGLSPLAFDAFICNS 679 (895)
Q Consensus 608 ~~~kli~~DiDGTL--~~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~---~~~~~~~l~~l~l~~~~~d~~I~~n 679 (895)
...++++||+|||| .+.+.+...+++++|+++| +.|+++|+|+ ...+.+-++.+|+.. .++-++++.
T Consensus 26 ~~~~~~~~D~DGtl~~~~~~~~ga~e~l~~lr~~g----~~~~~~TN~~~~~~~~~~~~l~~lGi~~-~~~~I~ts~ 97 (311)
T PLN02645 26 DSVETFIFDCDGVIWKGDKLIEGVPETLDMLRSMG----KKLVFVTNNSTKSRAQYGKKFESLGLNV-TEEEIFSSS 97 (311)
T ss_pred HhCCEEEEeCcCCeEeCCccCcCHHHHHHHHHHCC----CEEEEEeCCCCCCHHHHHHHHHHCCCCC-ChhhEeehH
Confidence 35789999999999 3456678899999999987 9999999998 555555567888852 455555543
No 209
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=96.99 E-value=0.53 Score=54.25 Aligned_cols=146 Identities=16% Similarity=0.177 Sum_probs=77.3
Q ss_pred CCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhh-hhhHHHHHHHHHHHHHcCCCCCEEeCC
Q 002665 315 RKPMILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMS-GTNAALLLSILKLIDKYDLYGQVAYPK 391 (895)
Q Consensus 315 ~~~~Il~vgrl~--~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~-~~~~~~~~~i~~~~~~~~l~~~v~~~g 391 (895)
+..+.++.|.+. ..+-+..+..+++.+. . .+..++......+... ....+......+..++ ..++..+.+
T Consensus 261 ~sVvyvsfGS~~~l~~~q~~ela~gL~~s~----~-~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~--~~~~g~v~~ 333 (455)
T PLN02152 261 SSVIYVSFGTMVELSKKQIEELARALIEGK----R-PFLWVITDKLNREAKIEGEEETEIEKIAGFRHE--LEEVGMIVS 333 (455)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHcC----C-CeEEEEecCcccccccccccccccccchhHHHh--ccCCeEEEe
Confidence 345667777654 3455667777777663 2 4434554321100000 0000000001122222 234556678
Q ss_pred CCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCc----cccccc-CCceEEeC-----CCCH
Q 002665 392 HHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGP----VDIHRV-LDNGLLVD-----PHDQ 461 (895)
Q Consensus 392 ~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~----~eiv~~-~~~g~lv~-----p~d~ 461 (895)
++|+.+ ++... +..+|| ..+-..+++|++.+|+|+|+-...+= ...+.+ -+.|+-+. .-+.
T Consensus 334 W~PQ~~---iL~h~--~vg~fv----tH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~ 404 (455)
T PLN02152 334 WCSQIE---VLRHR--AVGCFV----THCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLVER 404 (455)
T ss_pred eCCHHH---HhCCc--ccceEE----eeCCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCcCcH
Confidence 887665 55555 113454 24555689999999999999775432 222222 12455542 2368
Q ss_pred HHHHHHHHHHhhCHH
Q 002665 462 QSIADALLKLVSDKQ 476 (895)
Q Consensus 462 ~~la~ai~~ll~~~~ 476 (895)
+++++++.++++++.
T Consensus 405 e~l~~av~~vm~~~~ 419 (455)
T PLN02152 405 GEIRRCLEAVMEEKS 419 (455)
T ss_pred HHHHHHHHHHHhhhH
Confidence 999999999997543
No 210
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=96.96 E-value=0.0075 Score=72.04 Aligned_cols=56 Identities=16% Similarity=0.101 Sum_probs=49.8
Q ss_pred cccEEEEEEecCCC------ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 608 RRKYVFVIAADCDT------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 608 ~~~kli~~DiDGTL------~~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
.-.+.+++..|+++ ...+.+..+++++.|++.| +++++.||-....+..+.+++|+
T Consensus 424 ~G~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l~~~G----i~v~miTGD~~~ta~~iA~~lGI 485 (675)
T TIGR01497 424 QGGTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQLRKMG----IKTIMITGDNRLTAAAIAAEAGV 485 (675)
T ss_pred CCCeEEEEEECCEEEEEEEecccchhHHHHHHHHHHHCC----CEEEEEcCCCHHHHHHHHHHcCC
Confidence 34577888889887 4788899999999999997 99999999999999999999987
No 211
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.96 E-value=0.00089 Score=63.34 Aligned_cols=53 Identities=13% Similarity=0.045 Sum_probs=45.8
Q ss_pred EEEEEEecCCCC-----------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCC--------HHHHHHHHHhCCC
Q 002665 611 YVFVIAADCDTT-----------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALT--------ILELHSLLVSGGL 667 (895)
Q Consensus 611 kli~~DiDGTL~-----------~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~--------~~~~~~~l~~l~l 667 (895)
|+++||+||||. ....+...++++.|+++| +.++|+|+++ ...+..+++.+++
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g----~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEAG----YKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHCC----CEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 689999999995 245577889999999886 9999999999 7788889999887
No 212
>PLN03015 UDP-glucosyl transferase
Probab=96.92 E-value=0.99 Score=52.10 Aligned_cols=78 Identities=15% Similarity=0.165 Sum_probs=50.9
Q ss_pred EEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCc----cccc-ccCCceEEeC----
Q 002665 387 VAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGP----VDIH-RVLDNGLLVD---- 457 (895)
Q Consensus 387 v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~----~eiv-~~~~~g~lv~---- 457 (895)
+.+.++.|+.++.+ .. +.+.|| ..+--.+.+|++.+|+|+|+-..-+= ...+ +..+.|+-+.
T Consensus 337 l~v~~W~PQ~~vL~---h~--~vg~fv----tH~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~ 407 (470)
T PLN03015 337 LVVTQWAPQVEILS---HR--SIGGFL----SHCGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPS 407 (470)
T ss_pred eEEEecCCHHHHhc---cC--ccCeEE----ecCCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEeccccc
Confidence 45668888877555 32 115565 24444688999999999999875331 1222 2334566553
Q ss_pred --CCCHHHHHHHHHHHhh
Q 002665 458 --PHDQQSIADALLKLVS 473 (895)
Q Consensus 458 --p~d~~~la~ai~~ll~ 473 (895)
.-..++++++|++++.
T Consensus 408 ~~~v~~e~i~~~v~~lm~ 425 (470)
T PLN03015 408 EKVIGREEVASLVRKIVA 425 (470)
T ss_pred CCccCHHHHHHHHHHHHc
Confidence 2367899999999995
No 213
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=96.92 E-value=0.05 Score=61.30 Aligned_cols=270 Identities=10% Similarity=0.049 Sum_probs=119.0
Q ss_pred CcEEEeccCCchHHHHHHhccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEecCH
Q 002665 148 PVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITSTR 227 (895)
Q Consensus 148 pDvIh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~s~ 227 (895)
-.++.+........ ......+.++|.++|+. +.+...+-..+. . .... .........|.++++|+
T Consensus 79 Ak~~i~~~~~~~~~--~~~~~~~~~~i~lwHG~-~~K~~g~~~~~~--------~-~~~~---~~~~~~~~~d~~~~~s~ 143 (369)
T PF04464_consen 79 AKYIISDSYFPDLI--YFKKRKNQKYIQLWHGI-PLKKIGYDSPDN--------K-NYRK---NYKRNYRNYDYFIVSSE 143 (369)
T ss_dssp EEEEEESS---T----TS---TTSEEEE--SS---SB--GGG-S------------TS-H---HHHHHHTT-SEEEESSH
T ss_pred CcEEEECCCCCccc--ccccCCCcEEEEecCCC-cccccchhcccc--------c-cchh---hhhhhccCCcEEEECCH
Confidence 44666653322211 22334578999999998 433211100000 0 0000 11224678899999999
Q ss_pred HHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCCCCcC-CCcccCCCCCCCcccccCCCCCCCCCchhhh
Q 002665 228 QEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPPGIEF-HHIVRHNGDVDGEVERDEGSPASPDPPIWSE 306 (895)
Q Consensus 228 ~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~Gid~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (895)
.+.+.+.+.|+. .+ -.++..|..- +.+.... .......
T Consensus 144 ~~~~~~~~~f~~-~~-----------------------~~i~~~G~PR~D~l~~~~-----------------~~~~~~i 182 (369)
T PF04464_consen 144 FEKEIFKKAFGY-PE-----------------------DKILVTGYPRNDYLFNKS-----------------KENRNRI 182 (369)
T ss_dssp HHHHHHHHHTT---G-----------------------GGEEES--GGGHHHHHST-----------------T-HHHHH
T ss_pred HHHHHHHHHhcc-Cc-----------------------ceEEEeCCCeEhHHhccC-----------------HHHHHHH
Confidence 777665555543 22 1344555532 1111111 0001122
Q ss_pred hhhccCCCCCcEEEEEeCCCCCCCH------HHH--HHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHH
Q 002665 307 IMHFFSNPRKPMILALARPDPKKNI------TTL--VKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLI 378 (895)
Q Consensus 307 ~~~~~~~~~~~~Il~vgrl~~~Kgi------~~l--l~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~ 378 (895)
.+.+....++++||++=.......- ... ++.+.. ....++.|++-..+.... ..
T Consensus 183 ~~~~~~~~~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~li~k~Hp~~~~--------------~~ 244 (369)
T PF04464_consen 183 KKKLGIDKDKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLNF----LLKNNYVLIIKPHPNMKK--------------KF 244 (369)
T ss_dssp HHHTT--SS-EEEEEE----GGG--GGSS----TT-HHHHHH----HHTTTEEEEE--SHHHHT--------------T-
T ss_pred HHHhccCCCCcEEEEeeccccccccccccccccccCHHHHHH----HhCCCcEEEEEeCchhhh--------------ch
Confidence 3344556778899999654433221 111 222221 122466666644432111 11
Q ss_pred HH-cCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEc--CC-------CCcccccc
Q 002665 379 DK-YDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVAT--KN-------GGPVDIHR 448 (895)
Q Consensus 379 ~~-~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat--~~-------gg~~eiv~ 448 (895)
.. ....+++.+... ..++.+++..| |++| .-++-++.|++.++.|||-. +. |...+. .
T Consensus 245 ~~~~~~~~~i~~~~~--~~~~~~ll~~a----DiLI-----TDySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~-~ 312 (369)
T PF04464_consen 245 KDFKEDNSNIIFVSD--NEDIYDLLAAA----DILI-----TDYSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDY-E 312 (369)
T ss_dssp ---TT-TTTEEE-TT---S-HHHHHHT-----SEEE-----ESS-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-T-T
T ss_pred hhhhccCCcEEECCC--CCCHHHHHHhc----CEEE-----EechhHHHHHHHhCCCEEEEeccHHHHhhccCCCCch-H
Confidence 11 334456776655 35899999999 9977 35788999999999999953 22 222332 2
Q ss_pred cCCceEEeCCCCHHHHHHHHHHHhhCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Q 002665 449 VLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRI 505 (895)
Q Consensus 449 ~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~v~~~s~~~~a~~~~~~l 505 (895)
+...|-.+. +.+++.++|..+++++....+..+...+..-.|.=..-+++..+.+
T Consensus 313 ~~~pg~~~~--~~~eL~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Dg~s~eri~~~I 367 (369)
T PF04464_consen 313 EDLPGPIVY--NFEELIEAIENIIENPDEYKEKREKFRDKFFKYNDGNSSERIVNYI 367 (369)
T ss_dssp TSSSS-EES--SHHHHHHHHTTHHHHHHHTHHHHHHHHHHHSTT--S-HHHHHHHHH
T ss_pred hhCCCceeC--CHHHHHHHHHhhhhCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHH
Confidence 233466664 8999999999998866554444444444442343345555555443
No 214
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=96.86 E-value=0.0017 Score=64.07 Aligned_cols=65 Identities=9% Similarity=0.081 Sum_probs=47.2
Q ss_pred cccEEEEEEecCCCChh---------------hHHHHHHHHHHHhccCCCCceEEEEEcCCCH------------HHHHH
Q 002665 608 RRKYVFVIAADCDTTSD---------------FLEIIKKVVEAAGKDNSAGFIGFVLSTALTI------------LELHS 660 (895)
Q Consensus 608 ~~~kli~~DiDGTL~~~---------------~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~------------~~~~~ 660 (895)
-..|+++||+||||... .-+.+.++|+.|+++| +.++|+|..+. ..+..
T Consensus 11 ~~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G----~~l~I~TN~~~~~~~~~~~~~~~~~i~~ 86 (166)
T TIGR01664 11 PQSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDEG----YKIVIFTNQSGIGRGKLSAESFKNKIEA 86 (166)
T ss_pred CcCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHCC----CEEEEEeCCcccccCcccHHHHHHHHHH
Confidence 35799999999999421 1256889999999987 99999995443 24577
Q ss_pred HHHhCCCCCCCCCEEEeCC
Q 002665 661 LLVSGGLSPLAFDAFICNS 679 (895)
Q Consensus 661 ~l~~l~l~~~~~d~~I~~n 679 (895)
+++.+++. .+.+++++
T Consensus 87 ~l~~~gl~---~~~ii~~~ 102 (166)
T TIGR01664 87 FLEKLKVP---IQVLAATH 102 (166)
T ss_pred HHHHcCCC---EEEEEecC
Confidence 88999983 24555544
No 215
>PLN03004 UDP-glycosyltransferase
Probab=96.78 E-value=0.81 Score=52.67 Aligned_cols=80 Identities=11% Similarity=0.117 Sum_probs=57.0
Q ss_pred CEEeCCCCCCCcHHHHHHHhhcCCcE--EEecCCCCCCChHHHHHHHcCCCEEEcCCCC----cccccc-cCCceEEeCC
Q 002665 386 QVAYPKHHKQSDVPDIYRLAAKTKGV--FINPAFIEPFGLTLIEAAAYGLPIVATKNGG----PVDIHR-VLDNGLLVDP 458 (895)
Q Consensus 386 ~v~~~g~~~~~el~~ly~~a~~~~Dv--~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg----~~eiv~-~~~~g~lv~p 458 (895)
++.+.+++|+.+ +++.+ ++ || ..+--.+++|++++|+|+|+....+ ....+. .-+.|+.++.
T Consensus 335 g~~v~~W~PQ~~---iL~H~----~v~~Fv----TH~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~ 403 (451)
T PLN03004 335 GMVVKSWAPQVP---VLNHK----AVGGFV----THCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNE 403 (451)
T ss_pred cEEEEeeCCHHH---HhCCC----ccceEe----ccCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecC
Confidence 577788988776 56666 56 54 2444568899999999999987543 223332 3357877752
Q ss_pred -----CCHHHHHHHHHHHhhCHH
Q 002665 459 -----HDQQSIADALLKLVSDKQ 476 (895)
Q Consensus 459 -----~d~~~la~ai~~ll~~~~ 476 (895)
-+.++++++|++++++++
T Consensus 404 ~~~~~~~~e~l~~av~~vm~~~~ 426 (451)
T PLN03004 404 SETGFVSSTEVEKRVQEIIGECP 426 (451)
T ss_pred CcCCccCHHHHHHHHHHHhcCHH
Confidence 378999999999998754
No 216
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=96.77 E-value=0.0093 Score=64.02 Aligned_cols=51 Identities=18% Similarity=0.109 Sum_probs=41.5
Q ss_pred ecCCCChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcce-EEEEcCch
Q 002665 792 IPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHK-TVILKGVG 845 (895)
Q Consensus 792 ~p~g~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~-gVaMgNA~ 845 (895)
++.+-.+...++.+++++|++++++++ +||+.+ | ++|-+.+|. .+++.++.
T Consensus 153 ~~~~Kp~p~~~~~~~~~~g~~~~~~l~-IGD~~~-D-i~aA~~aGi~~i~v~~G~ 204 (272)
T PRK13223 153 LPQKKPDPAALLFVMKMAGVPPSQSLF-VGDSRS-D-VLAAKAAGVQCVALSYGY 204 (272)
T ss_pred CCCCCCCcHHHHHHHHHhCCChhHEEE-ECCCHH-H-HHHHHHCCCeEEEEecCC
Confidence 455666778999999999999999998 777777 8 999999997 55665544
No 217
>PLN02954 phosphoserine phosphatase
Probab=96.69 E-value=0.011 Score=61.35 Aligned_cols=44 Identities=11% Similarity=0.194 Sum_probs=33.7
Q ss_pred cCCCChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEE
Q 002665 793 PVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 793 p~g~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaM 841 (895)
+.+.+|..+++.+++++|+ +++++ +||+-+ | +.|-+.+|..++.
T Consensus 151 ~~~~~K~~~i~~~~~~~~~--~~~i~-iGDs~~-D-i~aa~~~~~~~~~ 194 (224)
T PLN02954 151 SRSGGKAEAVQHIKKKHGY--KTMVM-IGDGAT-D-LEARKPGGADLFI 194 (224)
T ss_pred cCCccHHHHHHHHHHHcCC--CceEE-EeCCHH-H-HHhhhcCCCCEEE
Confidence 3456799999999999886 57887 777777 7 9998886655444
No 218
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=96.62 E-value=0.023 Score=60.00 Aligned_cols=67 Identities=10% Similarity=0.058 Sum_probs=48.5
Q ss_pred cccEEEEEEecCCC--ChhhHHHHHHHHHHHhccCCCCceEEEEEc---CCCHHHHHHHHHhC-CCCCCCCCEEEeCC
Q 002665 608 RRKYVFVIAADCDT--TSDFLEIIKKVVEAAGKDNSAGFIGFVLST---ALTILELHSLLVSG-GLSPLAFDAFICNS 679 (895)
Q Consensus 608 ~~~kli~~DiDGTL--~~~~~~~~~~~l~~l~~~g~~~~i~vviaT---GR~~~~~~~~l~~l-~l~~~~~d~~I~~n 679 (895)
.+.+.++||+|||| -++.-+...++|+.|+++| +.+++.| .|+...+..-|+.+ +++ ..+|-++++.
T Consensus 6 ~~y~~~l~DlDGvl~~G~~~ipga~e~l~~L~~~g----~~~iflTNn~~~s~~~~~~~L~~~~~~~-~~~~~i~TS~ 78 (269)
T COG0647 6 DKYDGFLFDLDGVLYRGNEAIPGAAEALKRLKAAG----KPVIFLTNNSTRSREVVAARLSSLGGVD-VTPDDIVTSG 78 (269)
T ss_pred hhcCEEEEcCcCceEeCCccCchHHHHHHHHHHcC----CeEEEEeCCCCCCHHHHHHHHHhhcCCC-CCHHHeecHH
Confidence 46778999999999 4677788999999999997 6666654 56777677777774 443 2445555543
No 219
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=96.58 E-value=0.0024 Score=68.86 Aligned_cols=67 Identities=7% Similarity=0.040 Sum_probs=49.1
Q ss_pred cEEEEEEecCCC--ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCC---HHHHHHHHHhCCCCCCCCCEEEeCCCc
Q 002665 610 KYVFVIAADCDT--TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALT---ILELHSLLVSGGLSPLAFDAFICNSGS 681 (895)
Q Consensus 610 ~kli~~DiDGTL--~~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~---~~~~~~~l~~l~l~~~~~d~~I~~nGa 681 (895)
.++++||+|||| .....+.+.++|+.|+++| +.|+++|+|+ ...+...++.+|+.. .++-+++++-+
T Consensus 2 ~~~~~~D~DGtl~~~~~~~~ga~e~l~~L~~~g----~~~~~~Tnns~~~~~~~~~~l~~~G~~~-~~~~i~ts~~~ 73 (279)
T TIGR01452 2 AQGFIFDCDGVLWLGERVVPGAPELLDRLARAG----KAALFVTNNSTKSRAEYALKFARLGFNG-LAEQLFSSALC 73 (279)
T ss_pred ccEEEEeCCCceEcCCeeCcCHHHHHHHHHHCC----CeEEEEeCCCCCCHHHHHHHHHHcCCCC-ChhhEecHHHH
Confidence 578999999999 3445556899999999987 9999999975 555556677888752 34445554433
No 220
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=96.56 E-value=0.0034 Score=56.21 Aligned_cols=52 Identities=15% Similarity=0.093 Sum_probs=41.7
Q ss_pred EEEEecCCC--ChhhHHHHHHHHHHHhccCCCCceEEEEEc---CCCHHHHHHHHHhCCCC
Q 002665 613 FVIAADCDT--TSDFLEIIKKVVEAAGKDNSAGFIGFVLST---ALTILELHSLLVSGGLS 668 (895)
Q Consensus 613 i~~DiDGTL--~~~~~~~~~~~l~~l~~~g~~~~i~vviaT---GR~~~~~~~~l~~l~l~ 668 (895)
++||+|||| ...+.+...+++++|+++| ..+++.| .|+...+...|+.+|++
T Consensus 1 ~l~D~dGvl~~g~~~ipga~e~l~~L~~~g----~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPGAVEALDALRERG----KPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp EEEESTTTSEETTEE-TTHHHHHHHHHHTT----SEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred CEEeCccEeEeCCCcCcCHHHHHHHHHHcC----CCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 689999999 4678888999999999997 6666665 56778888888999984
No 221
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=96.54 E-value=0.03 Score=66.38 Aligned_cols=191 Identities=14% Similarity=0.077 Sum_probs=125.4
Q ss_pred CCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc---cCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEE
Q 002665 312 SNPRKPMILALARPDPKKNITTLVKAFGECRPL---RELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVA 388 (895)
Q Consensus 312 ~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~---~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~ 388 (895)
..|+...++++=|+...|.....+.-...+... ...+.+.+|.|+....... ...+....|+..++..+...+|.
T Consensus 483 ~~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~--~aK~iIk~I~~~a~~in~~lkVv 560 (750)
T COG0058 483 VDPNALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADY--AAKEIIKLINDVADVINNKLKVV 560 (750)
T ss_pred cCCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcch--HHHHHHHHHHHHHHhhcccceEE
Confidence 346788899999999999877665544444221 3345676565554433222 23557788888888887777888
Q ss_pred eCCCCCCCcHHHHHHHhhcCCcEEEecCC--CCCCChHHHHHHHcCCCEEEcCCCCcccccc--cCCceEEeCCCCHHHH
Q 002665 389 YPKHHKQSDVPDIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAYGLPIVATKNGGPVDIHR--VLDNGLLVDPHDQQSI 464 (895)
Q Consensus 389 ~~g~~~~~el~~ly~~a~~~~Dv~v~ps~--~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~--~~~~g~lv~p~d~~~l 464 (895)
|+...+-.--..++.+| ||-.+.|+ .|..|.+-+=|+--|.|-|+|..|+..|+.+ .+.||++|- .+.++.
T Consensus 561 Fl~nYdvslA~~iipa~----Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG-~~~~~v 635 (750)
T COG0058 561 FLPNYDVSLAELLIPAA----DVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFG-ETVEEV 635 (750)
T ss_pred EeCCCChhHHHhhcccc----cccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeC-CchhhH
Confidence 88876555555566666 99999987 6899999999999999999999999999987 778999994 344343
Q ss_pred HHHHHHHhhCHHHHHHHHHHHHH----HH-hhCCHHHHHHHHHHHHHHhhh
Q 002665 465 ADALLKLVSDKQLWERCRQNGLK----NI-HQFSWPEHCKSYLSRISSCKQ 510 (895)
Q Consensus 465 a~ai~~ll~~~~~~~~~~~~~~~----~v-~~~s~~~~a~~~~~~l~~~~~ 510 (895)
-.-...-..+..+.....+.-.. .. ..|+. .|...+.+.+.++..
T Consensus 636 ~~~~~~~~~~~~~y~~~~~~v~~~~~~~~~~~~~p-~~~~~~~~~~~sl~~ 685 (750)
T COG0058 636 DALRADGYDPNALYYELENEVKPVLDEIIDGRFSP-GWKSRFKNLIDSLLP 685 (750)
T ss_pred HHHHhcccccHHHHHHHhHHHHHHHHHHhcccCCc-ccHHHHHHHHHHhhh
Confidence 33333223222222222222211 11 24555 666666666666653
No 222
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=96.47 E-value=0.0067 Score=58.25 Aligned_cols=50 Identities=18% Similarity=0.071 Sum_probs=41.2
Q ss_pred EEEEEecCCCChh--------------hHHHHHHHHHHHhccCCCCceEEEEEcCCCHHH---HHHHHHhC
Q 002665 612 VFVIAADCDTTSD--------------FLEIIKKVVEAAGKDNSAGFIGFVLSTALTILE---LHSLLVSG 665 (895)
Q Consensus 612 li~~DiDGTL~~~--------------~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~---~~~~l~~l 665 (895)
+|++|+|||+|.+ ..+...++.+.++++| .+++..|+|+... .+.|+...
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~G----Y~ilYlTaRp~~qa~~Tr~~L~~~ 67 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADNG----YKILYLTARPIGQANRTRSWLAQH 67 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHCC----eEEEEECcCcHHHHHHHHHHHHHH
Confidence 4899999999633 5677889999999997 9999999999764 45678776
No 223
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=96.46 E-value=0.024 Score=69.73 Aligned_cols=56 Identities=14% Similarity=-0.009 Sum_probs=47.3
Q ss_pred cccEEEEEEe---cCCC--------ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 608 RRKYVFVIAA---DCDT--------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 608 ~~~kli~~Di---DGTL--------~~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
...+.+++.+ ++.| .+.+.+.++++++++++.| +++++.||.+...+..+.+++|+
T Consensus 415 ~G~rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aG----I~v~miTGD~~~tA~~IA~~lGI 481 (755)
T TIGR01647 415 RGYRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERARHLG----VEVKMVTGDHLAIAKETARRLGL 481 (755)
T ss_pred CCCEEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHHHHHHHCC----CeEEEECCCCHHHHHHHHHHcCC
Confidence 3456777766 3333 4788899999999999997 99999999999999999999998
No 224
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=96.43 E-value=0.013 Score=69.76 Aligned_cols=55 Identities=15% Similarity=0.129 Sum_probs=48.8
Q ss_pred ccEEEEEEecCCC------ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 609 RKYVFVIAADCDT------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 609 ~~kli~~DiDGTL------~~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
....++++.||++ ...+.+..++++++|++.| +.++++||.+...+..+++++|+
T Consensus 384 g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~G----i~v~ilSgd~~~~a~~ia~~lgi 444 (562)
T TIGR01511 384 GSTSVLVAVNGELAGVFALEDQLRPEAKEVIQALKRRG----IEPVMLTGDNRKTAKAVAKELGI 444 (562)
T ss_pred CCEEEEEEECCEEEEEEEecccccHHHHHHHHHHHHcC----CeEEEEcCCCHHHHHHHHHHcCC
Confidence 4578889999998 4678889999999999987 99999999999999999999887
No 225
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=96.42 E-value=0.016 Score=60.16 Aligned_cols=46 Identities=13% Similarity=0.090 Sum_probs=38.3
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcce-EEEEcCch
Q 002665 797 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHK-TVILKGVG 845 (895)
Q Consensus 797 sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~-gVaMgNA~ 845 (895)
.|..+++.++++++++++++++ +||+.+ | ++|.+.+|. +|.+..+.
T Consensus 150 p~~~~~~~~~~~~~~~~~~~i~-igD~~~-D-i~~a~~~g~~~i~v~~g~ 196 (226)
T PRK13222 150 PDPAPLLLACEKLGLDPEEMLF-VGDSRN-D-IQAARAAGCPSVGVTYGY 196 (226)
T ss_pred cChHHHHHHHHHcCCChhheEE-ECCCHH-H-HHHHHHCCCcEEEECcCC
Confidence 3578899999999999999998 777777 8 999999997 66665444
No 226
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=96.39 E-value=0.38 Score=52.76 Aligned_cols=153 Identities=14% Similarity=0.081 Sum_probs=86.7
Q ss_pred hhhhccCCCCCcEE-EEEeC-CC-CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcC
Q 002665 306 EIMHFFSNPRKPMI-LALAR-PD-PKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYD 382 (895)
Q Consensus 306 ~~~~~~~~~~~~~I-l~vgr-l~-~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~ 382 (895)
.+.+++.+.+++++ +..|. -. -.+-...+++|+.++....+ ++.+++--.... +...+....+...
T Consensus 178 ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~--~~~~vlp~~~~~---------~~~~~~~~~~~~~ 246 (381)
T COG0763 178 AREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYP--DLKFVLPLVNAK---------YRRIIEEALKWEV 246 (381)
T ss_pred HHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCC--CceEEEecCcHH---------HHHHHHHHhhccc
Confidence 44455566665554 44443 22 23567788888888865444 555555433311 0111112222222
Q ss_pred CCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcC-CCCc----------------cc
Q 002665 383 LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATK-NGGP----------------VD 445 (895)
Q Consensus 383 l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~-~gg~----------------~e 445 (895)
....+.+ ...+-...+..| |+.+.. .|.+.+|++.+|+|.|.+- .... ..
T Consensus 247 ~~~~~~~----~~~~~~~a~~~a----D~al~a-----SGT~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpN 313 (381)
T COG0763 247 AGLSLIL----IDGEKRKAFAAA----DAALAA-----SGTATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPN 313 (381)
T ss_pred cCceEEe----cCchHHHHHHHh----hHHHHh-----ccHHHHHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchH
Confidence 1122222 234677799999 999876 4999999999999998764 3222 22
Q ss_pred ccccCCceEEe-----CCCCHHHHHHHHHHHhhCHHHHHHHHHHH
Q 002665 446 IHRVLDNGLLV-----DPHDQQSIADALLKLVSDKQLWERCRQNG 485 (895)
Q Consensus 446 iv~~~~~g~lv-----~p~d~~~la~ai~~ll~~~~~~~~~~~~~ 485 (895)
|+.+ -.++ ..-.++.+++++..++.|.+.++++.+..
T Consensus 314 Ii~~---~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~ 355 (381)
T COG0763 314 ILAG---REIVPELIQEDCTPENLARALEELLLNGDRREALKEKF 355 (381)
T ss_pred HhcC---CccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHH
Confidence 2211 0111 12358899999999999885555444433
No 227
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=96.36 E-value=0.0083 Score=62.67 Aligned_cols=40 Identities=15% Similarity=0.101 Sum_probs=33.6
Q ss_pred hHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEE
Q 002665 798 RSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVI 840 (895)
Q Consensus 798 Kg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVa 840 (895)
+...+.++++++|++++++++ +||+.+ | ++|-+.+|..++
T Consensus 153 ~p~~~~~~~~~l~~~p~~~l~-IGDs~~-D-i~aA~~aG~~~i 192 (229)
T PRK13226 153 HPLPLLVAAERIGVAPTDCVY-VGDDER-D-ILAARAAGMPSV 192 (229)
T ss_pred CHHHHHHHHHHhCCChhhEEE-eCCCHH-H-HHHHHHCCCcEE
Confidence 455689999999999999999 777776 7 999999997654
No 228
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=96.33 E-value=0.049 Score=68.90 Aligned_cols=42 Identities=12% Similarity=0.159 Sum_probs=39.3
Q ss_pred ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 622 TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 622 ~~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
.+.+.+.+++++++++++| +++++.||-+...+..+.+++|+
T Consensus 577 ~Dplr~~~~~aI~~l~~aG----I~v~miTGD~~~tA~~iA~~~GI 618 (941)
T TIGR01517 577 KDPLRPGVREAVQECQRAG----ITVRMVTGDNIDTAKAIARNCGI 618 (941)
T ss_pred cCCCchhHHHHHHHHHHCC----CEEEEECCCChHHHHHHHHHcCC
Confidence 4678889999999999997 99999999999999999999998
No 229
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=96.29 E-value=0.067 Score=66.92 Aligned_cols=42 Identities=17% Similarity=0.060 Sum_probs=39.3
Q ss_pred ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 622 TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 622 ~~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
.+.+.+.++++++++++.| +++++.||-+...+..+.+++|+
T Consensus 513 ~Dp~R~~~~~aI~~l~~aG----I~vvmiTGD~~~tA~aIA~~lGI 554 (867)
T TIGR01524 513 LDPPKESTKEAIAALFKNG----INVKVLTGDNEIVTARICQEVGI 554 (867)
T ss_pred eCCCchhHHHHHHHHHHCC----CEEEEEcCCCHHHHHHHHHHcCC
Confidence 3678889999999999997 99999999999999999999998
No 230
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=96.29 E-value=0.74 Score=53.97 Aligned_cols=154 Identities=15% Similarity=0.107 Sum_probs=83.8
Q ss_pred hhhccCCCCCcEE-EEEe-CCCC-CCCHHHHHHHHH--hcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHc
Q 002665 307 IMHFFSNPRKPMI-LALA-RPDP-KKNITTLVKAFG--ECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKY 381 (895)
Q Consensus 307 ~~~~~~~~~~~~I-l~vg-rl~~-~Kgi~~ll~A~~--~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~ 381 (895)
.++++.++++++| +.-| |-.+ .+.++.+++|+. ++. + ++.+++...+.. ....+....+..
T Consensus 404 r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~---~--~l~fvvp~a~~~---------~~~~i~~~~~~~ 469 (608)
T PRK01021 404 KEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLA---S--THQLLVSSANPK---------YDHLILEVLQQE 469 (608)
T ss_pred HHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhc---c--CeEEEEecCchh---------hHHHHHHHHhhc
Confidence 3445555565654 4444 4333 356778888887 442 2 355555432211 012233333322
Q ss_pred CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcC-CCCccc---------------
Q 002665 382 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATK-NGGPVD--------------- 445 (895)
Q Consensus 382 ~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~-~gg~~e--------------- 445 (895)
+.. .+.+.. .++-.+++++| |+.+.. .|.+.+|++.+|+|.|..- .+...-
T Consensus 470 ~~~-~~~ii~---~~~~~~~m~aa----D~aLaa-----SGTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIs 536 (608)
T PRK01021 470 GCL-HSHIVP---SQFRYELMREC----DCALAK-----CGTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYS 536 (608)
T ss_pred CCC-CeEEec---CcchHHHHHhc----Ceeeec-----CCHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeee
Confidence 211 122221 11236899999 999987 4999999999999998743 321111
Q ss_pred ---ccccCC-ceEEe---CCCCHHHHHHHHHHHhhCHHHHHHHHHHHHHH
Q 002665 446 ---IHRVLD-NGLLV---DPHDQQSIADALLKLVSDKQLWERCRQNGLKN 488 (895)
Q Consensus 446 ---iv~~~~-~g~lv---~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~ 488 (895)
++.+.. ---++ +.-+++.+++++ ++|.|++.++++.+...+.
T Consensus 537 LpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~d~~~r~~~~~~l~~l 585 (608)
T PRK01021 537 LPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILKTSQSKEKQKDACRDL 585 (608)
T ss_pred hhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhcCHHHHHHHHHHHHHH
Confidence 111110 01122 334789999996 8888887666655555443
No 231
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.23 E-value=0.014 Score=60.81 Aligned_cols=36 Identities=8% Similarity=0.049 Sum_probs=30.4
Q ss_pred HHHHHHHHhccCCCCceEEEEEcCC----CHHHHHHHHHhCCCC
Q 002665 629 IKKVVEAAGKDNSAGFIGFVLSTAL----TILELHSLLVSGGLS 668 (895)
Q Consensus 629 ~~~~l~~l~~~g~~~~i~vviaTGR----~~~~~~~~l~~l~l~ 668 (895)
.+++|+.++++| +.++|+|+| ....+..+++.+|++
T Consensus 119 a~elL~~l~~~G----~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 119 ARQLIDMHQRRG----DAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred HHHHHHHHHHCC----CEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 678888888887 999999999 666788888889983
No 232
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=96.22 E-value=0.021 Score=73.02 Aligned_cols=41 Identities=17% Similarity=0.141 Sum_probs=38.7
Q ss_pred hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 623 SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 623 ~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
+.+.+.++++++.|+++| ++++++||.+...+..+.+++|+
T Consensus 655 d~lr~~~~~~I~~l~~ag----i~v~miTGD~~~TA~~iA~~~gi 695 (1054)
T TIGR01657 655 NPLKPDTKEVIKELKRAS----IRTVMITGDNPLTAVHVARECGI 695 (1054)
T ss_pred cCCCccHHHHHHHHHHCC----CeEEEECCCCHHHHHHHHHHcCC
Confidence 568889999999999997 99999999999999999999998
No 233
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=96.21 E-value=0.067 Score=67.00 Aligned_cols=42 Identities=14% Similarity=0.023 Sum_probs=39.3
Q ss_pred ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 622 TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 622 ~~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
.+.+.+.+++++++++++| +++++.||=+...+..+.+++|+
T Consensus 548 ~Dp~R~~a~~aI~~l~~aG----I~v~miTGD~~~tA~~IA~~lGI 589 (902)
T PRK10517 548 LDPPKETTAPALKALKASG----VTVKILTGDSELVAAKVCHEVGL 589 (902)
T ss_pred hCcchhhHHHHHHHHHHCC----CEEEEEcCCCHHHHHHHHHHcCC
Confidence 3678889999999999997 99999999999999999999998
No 234
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=96.20 E-value=0.039 Score=66.15 Aligned_cols=55 Identities=20% Similarity=0.113 Sum_probs=48.9
Q ss_pred ccEEEEEEecCCC------ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 609 RKYVFVIAADCDT------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 609 ~~kli~~DiDGTL------~~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
..+.+++..|+++ ...+.+..++++++|++.| +++++.||=+...+..+.+++|+
T Consensus 424 G~~~l~va~~~~~lG~i~l~D~~R~~~~eai~~Lr~~G----I~vvMiTGDn~~TA~aIA~elGI 484 (679)
T PRK01122 424 GGTPLVVAEDNRVLGVIYLKDIVKPGIKERFAELRKMG----IKTVMITGDNPLTAAAIAAEAGV 484 (679)
T ss_pred CCcEEEEEECCeEEEEEEEeccCchhHHHHHHHHHHCC----CeEEEECCCCHHHHHHHHHHcCC
Confidence 4567788889887 3678889999999999997 99999999999999999999987
No 235
>PRK11590 hypothetical protein; Provisional
Probab=96.20 E-value=0.028 Score=57.92 Aligned_cols=47 Identities=13% Similarity=-0.031 Sum_probs=33.5
Q ss_pred EeecCCCChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEEc
Q 002665 790 HVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILK 842 (895)
Q Consensus 790 EI~p~g~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaMg 842 (895)
-....|..|...|+.++ |.+.+..+| -||+.+ | ++||+.|++++++.
T Consensus 156 g~~c~g~~K~~~l~~~~---~~~~~~~~a-Y~Ds~~-D-~pmL~~a~~~~~vn 202 (211)
T PRK11590 156 TLRCLGHEKVAQLERKI---GTPLRLYSG-YSDSKQ-D-NPLLYFCQHRWRVT 202 (211)
T ss_pred CccCCChHHHHHHHHHh---CCCcceEEE-ecCCcc-c-HHHHHhCCCCEEEC
Confidence 33455666776666544 567777778 555555 6 99999999999984
No 236
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=96.19 E-value=0.18 Score=54.92 Aligned_cols=194 Identities=16% Similarity=0.152 Sum_probs=110.6
Q ss_pred CCCcEEEeccCCchHHHHHHhccCCC--CEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEE
Q 002665 146 IWPVAIHGHYADAGDAAALLSGALNV--PMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVI 223 (895)
Q Consensus 146 ~~pDvIh~h~~~~~~~~~~~~~~~~i--p~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi 223 (895)
.+||+|.+....+..++..+++..|. +.|+..+ . .. ..+..|+||
T Consensus 56 ~~pdLiIsaGr~t~~~~~~l~r~~gg~~~~V~i~~-P------------~~--------------------~~~~FDlvi 102 (311)
T PF06258_consen 56 PWPDLIISAGRRTAPAALALRRASGGRTKTVQIMD-P------------RL--------------------PPRPFDLVI 102 (311)
T ss_pred CCCcEEEECCCchHHHHHHHHHHcCCCceEEEEcC-C------------CC--------------------CccccCEEE
Confidence 56999999999888999999988876 5555544 1 00 145778999
Q ss_pred ecCHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeE---EeCCCCcCCCcccCCCCCCCcccccCCCCCCCC
Q 002665 224 TSTRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMV---VIPPGIEFHHIVRHNGDVDGEVERDEGSPASPD 300 (895)
Q Consensus 224 ~~s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~---vip~Gid~~~f~~~~~~~~~~~~~~~~~~~~~~ 300 (895)
+...+... . . +++. .-||.++.+......
T Consensus 103 ~p~HD~~~------~--~----------------------~Nvl~t~ga~~~i~~~~l~~a~------------------ 134 (311)
T PF06258_consen 103 VPEHDRLP------R--G----------------------PNVLPTLGAPNRITPERLAEAA------------------ 134 (311)
T ss_pred ECcccCcC------C--C----------------------CceEecccCCCcCCHHHHHHHH------------------
Confidence 97754110 0 0 1332 233444443332110
Q ss_pred CchhhhhhhccCCCCCcEEEEEeCCCCCC--CHH---HHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHH
Q 002665 301 PPIWSEIMHFFSNPRKPMILALARPDPKK--NIT---TLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSIL 375 (895)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~Il~vgrl~~~K--gi~---~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~ 375 (895)
.+...++...+...+.+.+|.-+..- +-+ .+++.+..+.+... ..+ +|..++--..+ ....+.
T Consensus 135 ---~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~-~~~-~vttSRRTp~~-------~~~~L~ 202 (311)
T PF06258_consen 135 ---AAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG-GSL-LVTTSRRTPPE-------AEAALR 202 (311)
T ss_pred ---HhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC-CeE-EEEcCCCCcHH-------HHHHHH
Confidence 01112233335556667788654332 333 45555555543222 234 34444433222 233444
Q ss_pred HHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCC
Q 002665 376 KLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGG 442 (895)
Q Consensus 376 ~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg 442 (895)
+..+ -.+.+.+...-+..-+.+++..| |.+++|. |..++ +.||+++|+||..-...+
T Consensus 203 ~~~~---~~~~~~~~~~~~~nPy~~~La~a----d~i~VT~--DSvSM-vsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 203 ELLK---DNPGVYIWDGTGENPYLGFLAAA----DAIVVTE--DSVSM-VSEAAATGKPVYVLPLPG 259 (311)
T ss_pred Hhhc---CCCceEEecCCCCCcHHHHHHhC----CEEEEcC--ccHHH-HHHHHHcCCCEEEecCCC
Confidence 3332 33566555665666799999999 9999984 44333 679999999998877654
No 237
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=96.18 E-value=0.061 Score=68.38 Aligned_cols=41 Identities=12% Similarity=-0.018 Sum_probs=38.8
Q ss_pred hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 623 SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 623 ~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
+.+.+.++++++.++++| +++++.||.....+..+.+++|+
T Consensus 645 Dp~r~~v~~aI~~l~~aG----Ikv~MiTGD~~~tA~~iA~~~Gi 685 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQAG----INVHMLTGDFPETAKAIAQEVGI 685 (1053)
T ss_pred cCCchhHHHHHHHHHHCC----CEEEEECCCCHHHHHHHHHHcCC
Confidence 677889999999999997 99999999999999999999998
No 238
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=96.17 E-value=0.029 Score=68.85 Aligned_cols=56 Identities=13% Similarity=0.039 Sum_probs=49.9
Q ss_pred cccEEEEEEecCCC------ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 608 RRKYVFVIAADCDT------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 608 ~~~kli~~DiDGTL------~~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
...+.+++..||++ ...+.+..+++++.|++.| +.+++.||.+...+..+.+++|+
T Consensus 546 ~g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L~~~g----i~~~llTGd~~~~a~~ia~~lgi 607 (741)
T PRK11033 546 AGKTVVLVLRNDDVLGLIALQDTLRADARQAISELKALG----IKGVMLTGDNPRAAAAIAGELGI 607 (741)
T ss_pred CCCEEEEEEECCEEEEEEEEecCCchhHHHHHHHHHHCC----CEEEEEcCCCHHHHHHHHHHcCC
Confidence 44678889999998 3678889999999999987 99999999999999999999887
No 239
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=96.16 E-value=0.015 Score=69.18 Aligned_cols=57 Identities=18% Similarity=0.163 Sum_probs=48.9
Q ss_pred cccEEEEEEecCCC------ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 608 RRKYVFVIAADCDT------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 608 ~~~kli~~DiDGTL------~~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
...+.+++..||++ ...+.+..+++++.|+++| .+.++++||.+...+..+++++|+
T Consensus 362 ~g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g---~i~v~ivTgd~~~~a~~i~~~lgi 424 (556)
T TIGR01525 362 QGKTVVFVAVDGELLGVIALRDQLRPEAKEAIAALKRAG---GIKLVMLTGDNRSAAEAVAAELGI 424 (556)
T ss_pred CCcEEEEEEECCEEEEEEEecccchHhHHHHHHHHHHcC---CCeEEEEeCCCHHHHHHHHHHhCC
Confidence 34678899999988 3678889999999998862 289999999999999999999887
No 240
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=96.15 E-value=0.043 Score=58.80 Aligned_cols=42 Identities=24% Similarity=0.202 Sum_probs=35.6
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEE
Q 002665 797 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 797 sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaM 841 (895)
.|..++..++++++++++++++ +||+.+ | +.+-+.+|.-++.
T Consensus 196 ~k~~~~~~~l~~~~~~p~~~l~-IGDs~~-D-i~aA~~AG~~~I~ 237 (273)
T PRK13225 196 SKRRALSQLVAREGWQPAAVMY-VGDETR-D-VEAARQVGLIAVA 237 (273)
T ss_pred CCHHHHHHHHHHhCcChhHEEE-ECCCHH-H-HHHHHHCCCeEEE
Confidence 4778999999999999999988 777777 8 9999999976543
No 241
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=96.14 E-value=0.025 Score=71.17 Aligned_cols=41 Identities=10% Similarity=0.050 Sum_probs=38.3
Q ss_pred hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 623 SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 623 ~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
+.+.+.++++++.++++| +++++.||.+...+..+.+++|+
T Consensus 536 Dplr~~v~e~I~~l~~aG----I~v~miTGD~~~tA~~ia~~~gi 576 (917)
T TIGR01116 536 DPPRPEVADAIEKCRTAG----IRVIMITGDNKETAEAICRRIGI 576 (917)
T ss_pred CCCchhHHHHHHHHHHCC----CEEEEecCCCHHHHHHHHHHcCC
Confidence 567889999999999987 99999999999999999999998
No 242
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=96.03 E-value=0.09 Score=66.08 Aligned_cols=56 Identities=13% Similarity=0.004 Sum_probs=48.6
Q ss_pred cccEEEEEEecC-----CC------ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 608 RRKYVFVIAADC-----DT------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 608 ~~~kli~~DiDG-----TL------~~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
.-.|.+++.+++ |+ .+.+.+.++++++.|+++| +++++.||-+...+..+.+++|+
T Consensus 501 ~G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~G----i~v~miTGD~~~tA~~ia~~~Gi 567 (884)
T TIGR01522 501 AGLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTLITGG----VRIIMITGDSQETAVSIARRLGM 567 (884)
T ss_pred cCCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHHHHCC----CeEEEECCCCHHHHHHHHHHcCC
Confidence 446788888775 33 3778899999999999987 99999999999999999999998
No 243
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=95.96 E-value=0.096 Score=65.70 Aligned_cols=42 Identities=12% Similarity=0.035 Sum_probs=39.4
Q ss_pred ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 622 TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 622 ~~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
.+.+.+.+++++++++++| +++++.||=+...+..+.+++|+
T Consensus 548 ~Dp~R~~a~~aI~~l~~aG----I~v~miTGD~~~tA~aIA~~lGI 589 (903)
T PRK15122 548 LDPPKESAAPAIAALRENG----VAVKVLTGDNPIVTAKICREVGL 589 (903)
T ss_pred cCccHHHHHHHHHHHHHCC----CeEEEECCCCHHHHHHHHHHcCC
Confidence 3678899999999999997 99999999999999999999998
No 244
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=95.91 E-value=0.99 Score=46.54 Aligned_cols=200 Identities=16% Similarity=0.147 Sum_probs=112.2
Q ss_pred CCCcEEEeccCCchHHHHHHhccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEec
Q 002665 146 IWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITS 225 (895)
Q Consensus 146 ~~pDvIh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~ 225 (895)
.+||++++...-+..++..++++.+.+.++.+.+. ++ -.+..|+||++
T Consensus 69 ~~Pdl~I~aGrrta~l~~~lkk~~~~~~vVqI~~P------------rl--------------------p~~~fDlvivp 116 (329)
T COG3660 69 QRPDLIITAGRRTAPLAFYLKKKFGGIKVVQIQDP------------RL--------------------PYNHFDLVIVP 116 (329)
T ss_pred CCCceEEecccchhHHHHHHHHhcCCceEEEeeCC------------CC--------------------CcccceEEecc
Confidence 56999999988888888899999888777776653 10 13456888887
Q ss_pred CHHHHHHHHHHhcCCChHHHHHHHHhHhccccccCCCCCCeEEeCC-CCcCCCcccCCCCCCCcccccCCCCCCCCCchh
Q 002665 226 TRQEIEEQWRLYDGFDPVLERKLRARIKRGVSCHGRFMPRMVVIPP-GIEFHHIVRHNGDVDGEVERDEGSPASPDPPIW 304 (895)
Q Consensus 226 s~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~~v~vip~-Gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (895)
-.+.++++-.. .-.++|. |. +....+. ......
T Consensus 117 ~HD~~~~~s~~----------------------------~~Nilpi~Gs-~h~Vt~~-----------------~lAa~~ 150 (329)
T COG3660 117 YHDWREELSDQ----------------------------GPNILPINGS-PHNVTSQ-----------------RLAALR 150 (329)
T ss_pred chhhhhhhhcc----------------------------CCceeeccCC-CCcccHH-----------------HhhhhH
Confidence 76655442110 2233442 22 1111110 111223
Q ss_pred hhhhhccCCCCCcEEEEEeCCCCCCCH-HHHHHHHHhcccc---cCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHH
Q 002665 305 SEIMHFFSNPRKPMILALARPDPKKNI-TTLVKAFGECRPL---RELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDK 380 (895)
Q Consensus 305 ~~~~~~~~~~~~~~Il~vgrl~~~Kgi-~~ll~A~~~l~~~---~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~ 380 (895)
+..++++..+..++-+.||.-...-.. +....-+..+... +....+ ++--++...+..+ ..+..
T Consensus 151 e~~~~~~p~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~~-lisfSRRTp~~~~-----------s~l~~ 218 (329)
T COG3660 151 EAFKHLLPLPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSF-LISFSRRTPDTVK-----------SILKN 218 (329)
T ss_pred HHHHhhCCCCCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCceE-EEEeecCCcHHHH-----------HHHHh
Confidence 344455545667788899987655544 2233333222111 122233 3333333333322 33333
Q ss_pred -cCCCCCEEeCCC-CCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCC
Q 002665 381 -YDLYGQVAYPKH-HKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGG 442 (895)
Q Consensus 381 -~~l~~~v~~~g~-~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg 442 (895)
+.-.+.+++.+. -...-..+++..| |.++.+. |..+ -+-||.+.|+||..-...+
T Consensus 219 ~l~s~~~i~w~~~d~g~NPY~~~La~A----dyii~Ta--DSin-M~sEAasTgkPv~~~~~~~ 275 (329)
T COG3660 219 NLNSSPGIVWNNEDTGYNPYIDMLAAA----DYIISTA--DSIN-MCSEAASTGKPVFILEPPN 275 (329)
T ss_pred ccccCceeEeCCCCCCCCchHHHHhhc----ceEEEec--chhh-hhHHHhccCCCeEEEecCC
Confidence 455555666554 1234688999999 9999885 3333 3679999999998765444
No 245
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=95.72 E-value=0.025 Score=58.13 Aligned_cols=56 Identities=13% Similarity=-0.021 Sum_probs=45.5
Q ss_pred cccEEEEEEecCCCC-----------------------------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHH-
Q 002665 608 RRKYVFVIAADCDTT-----------------------------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILE- 657 (895)
Q Consensus 608 ~~~kli~~DiDGTL~-----------------------------~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~- 657 (895)
..+-.++||+|-|+. ....+.+.++++.++++| +.|+++|||+...
T Consensus 75 dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~G----~~Vf~lTGR~e~~r 150 (229)
T TIGR01675 75 DGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIELG----IKIFLLSGRWEELR 150 (229)
T ss_pred CCCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHCC----CEEEEEcCCChHHH
Confidence 457789999999981 124566788999999987 9999999999766
Q ss_pred --HHHHHHhCCC
Q 002665 658 --LHSLLVSGGL 667 (895)
Q Consensus 658 --~~~~l~~l~l 667 (895)
..+.|.+.|+
T Consensus 151 ~~T~~nL~~~G~ 162 (229)
T TIGR01675 151 NATLDNLINAGF 162 (229)
T ss_pred HHHHHHHHHcCC
Confidence 7788888888
No 246
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=95.71 E-value=0.077 Score=63.65 Aligned_cols=54 Identities=13% Similarity=0.101 Sum_probs=46.4
Q ss_pred cEEEEEEecCCC------ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 610 KYVFVIAADCDT------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 610 ~kli~~DiDGTL------~~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
.+.+++..|+++ ...+.+..++++++|++.| +++++.||-+...+..+.+++|+
T Consensus 421 ~~~l~v~~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~G----I~vvMiTGDn~~TA~aIA~elGI 480 (673)
T PRK14010 421 GTPLVVLEDNEILGVIYLKDVIKDGLVERFRELREMG----IETVMCTGDNELTAATIAKEAGV 480 (673)
T ss_pred CeEEEEEECCEEEEEEEeecCCcHHHHHHHHHHHHCC----CeEEEECCCCHHHHHHHHHHcCC
Confidence 344555567776 3678889999999999997 99999999999999999999998
No 247
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=95.71 E-value=0.082 Score=54.85 Aligned_cols=45 Identities=9% Similarity=0.014 Sum_probs=37.3
Q ss_pred CCChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEEc
Q 002665 795 LASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILK 842 (895)
Q Consensus 795 g~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaMg 842 (895)
+=.+...++.+++++|++++++++ +||+.+ | +++-+.+|..++.-
T Consensus 147 ~Kp~~~~~~~~~~~~~~~~~~~~~-igDs~~-D-i~aA~~aG~~~i~v 191 (222)
T PRK10826 147 SKPHPEVYLNCAAKLGVDPLTCVA-LEDSFN-G-MIAAKAARMRSIVV 191 (222)
T ss_pred CCCCHHHHHHHHHHcCCCHHHeEE-EcCChh-h-HHHHHHcCCEEEEe
Confidence 334567899999999999999998 778777 8 99999999766553
No 248
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=95.65 E-value=0.029 Score=66.38 Aligned_cols=54 Identities=13% Similarity=0.019 Sum_probs=47.0
Q ss_pred cEEEEEEecCCC------ChhhHHHHHHHHHHHhccCCCCce-EEEEEcCCCHHHHHHHHHhCCC
Q 002665 610 KYVFVIAADCDT------TSDFLEIIKKVVEAAGKDNSAGFI-GFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 610 ~kli~~DiDGTL------~~~~~~~~~~~l~~l~~~g~~~~i-~vviaTGR~~~~~~~~l~~l~l 667 (895)
...+++..||++ ...+.+..+++++.|+++| + .++++||.+...+..+++++|+
T Consensus 342 ~~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L~~~G----i~~v~vvTgd~~~~a~~i~~~lgi 402 (536)
T TIGR01512 342 KTIVHVARDGTYLGYILLSDEPRPDAAEAIAELKALG----IEKVVMLTGDRRAVAERVARELGI 402 (536)
T ss_pred CeEEEEEECCEEEEEEEEeccchHHHHHHHHHHHHcC----CCcEEEEcCCCHHHHHHHHHHcCC
Confidence 456777788887 3678889999999999987 9 9999999999999999999887
No 249
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=95.65 E-value=0.0087 Score=62.80 Aligned_cols=67 Identities=13% Similarity=0.060 Sum_probs=52.3
Q ss_pred EEEEecCCC--ChhhHHHHHHHHHHHhccCCCCceEEEEEc---CCCHHHHHHHHHh-CCCCCCCCCEEEeCCCceEe
Q 002665 613 FVIAADCDT--TSDFLEIIKKVVEAAGKDNSAGFIGFVLST---ALTILELHSLLVS-GGLSPLAFDAFICNSGSELY 684 (895)
Q Consensus 613 i~~DiDGTL--~~~~~~~~~~~l~~l~~~g~~~~i~vviaT---GR~~~~~~~~l~~-l~l~~~~~d~~I~~nGa~I~ 684 (895)
++||+|||| ...+.+.+.++++.++++| +.+++.| ||+...+.+.+.+ ++++ ..++-+|++..+...
T Consensus 1 ~lfD~DGvL~~~~~~~~~a~e~i~~l~~~g----~~~~~~tN~~~~~~~~~~~~l~~~~g~~-~~~~~iits~~~~~~ 73 (236)
T TIGR01460 1 FLFDIDGVLWLGHKPIPGAAEALNRLRAKG----KPVVFLTNNSSRSEEDYAEKLSSLLGVD-VSPDQIITSGSVTKD 73 (236)
T ss_pred CEEeCcCccCcCCccCcCHHHHHHHHHHCC----CeEEEEECCCCCCHHHHHHHHHHhcCCC-CCHHHeeeHHHHHHH
Confidence 579999999 3455668899999999886 7888887 9999999988888 7875 356777777655443
No 250
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=95.64 E-value=0.015 Score=56.11 Aligned_cols=53 Identities=13% Similarity=0.019 Sum_probs=41.7
Q ss_pred EEEEEEecCCCChh-------------hHHHHHHHHHHHhccCCCCceEEEEEcCCC---------------HHHHHHHH
Q 002665 611 YVFVIAADCDTTSD-------------FLEIIKKVVEAAGKDNSAGFIGFVLSTALT---------------ILELHSLL 662 (895)
Q Consensus 611 kli~~DiDGTL~~~-------------~~~~~~~~l~~l~~~g~~~~i~vviaTGR~---------------~~~~~~~l 662 (895)
++++||+||||+.. .-+...++++.|+++| +.++|+|..+ ...+...+
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~~g----~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l 76 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRAAG----YTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELL 76 (147)
T ss_pred CeEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHHCC----CEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHH
Confidence 47899999999321 3567789999999987 9999999865 24566778
Q ss_pred HhCCC
Q 002665 663 VSGGL 667 (895)
Q Consensus 663 ~~l~l 667 (895)
+.+++
T Consensus 77 ~~~~l 81 (147)
T TIGR01656 77 RQLGV 81 (147)
T ss_pred HhCCC
Confidence 88887
No 251
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=95.62 E-value=0.067 Score=55.15 Aligned_cols=45 Identities=7% Similarity=-0.052 Sum_probs=37.4
Q ss_pred cCCCChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEE
Q 002665 793 PVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVI 840 (895)
Q Consensus 793 p~g~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVa 840 (895)
..+-.|...++++++++|++++++++ +||+.+ | +++-+.+|..++
T Consensus 135 ~~~Kp~p~~~~~~~~~~~~~~~~~~~-iGDs~~-D-i~aa~~aG~~~i 179 (214)
T PRK13288 135 EHAKPDPEPVLKALELLGAKPEEALM-VGDNHH-D-ILAGKNAGTKTA 179 (214)
T ss_pred CCCCCCcHHHHHHHHHcCCCHHHEEE-ECCCHH-H-HHHHHHCCCeEE
Confidence 34446788999999999999999998 777777 8 999999997554
No 252
>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins. These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process
Probab=95.58 E-value=0.029 Score=47.48 Aligned_cols=36 Identities=33% Similarity=0.298 Sum_probs=29.4
Q ss_pred CCCcEEEeccCCchHH--HHHHhccCCCCEEEEeCCCc
Q 002665 146 IWPVAIHGHYADAGDA--AALLSGALNVPMVFTGHSLG 181 (895)
Q Consensus 146 ~~pDvIh~h~~~~~~~--~~~~~~~~~ip~v~t~H~~~ 181 (895)
++.||||+|...+... +..-++.+|++.|+|-|+++
T Consensus 49 E~I~IVHgH~a~S~l~hE~i~hA~~mGlktVfTDHSLf 86 (90)
T PF08288_consen 49 ERIDIVHGHQAFSTLCHEAILHARTMGLKTVFTDHSLF 86 (90)
T ss_pred cCeeEEEeehhhhHHHHHHHHHHHhCCCcEEeeccccc
Confidence 5699999998754433 56778889999999999984
No 253
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=95.58 E-value=0.016 Score=61.11 Aligned_cols=67 Identities=13% Similarity=0.035 Sum_probs=49.0
Q ss_pred cccEEEEEEecCCCC--hhhHHHHHHHHHHHhccCCCCceEEEEEcC--CCHHHHHHHHHhCCCCCCCCCEEEeC
Q 002665 608 RRKYVFVIAADCDTT--SDFLEIIKKVVEAAGKDNSAGFIGFVLSTA--LTILELHSLLVSGGLSPLAFDAFICN 678 (895)
Q Consensus 608 ~~~kli~~DiDGTL~--~~~~~~~~~~l~~l~~~g~~~~i~vviaTG--R~~~~~~~~l~~l~l~~~~~d~~I~~ 678 (895)
.+.++++||+||||. ..+.+...+++++|+++| +.++|+|. |+...+.+.++.+++....+|.++++
T Consensus 6 ~~~~~~~~D~dG~l~~~~~~~pga~e~L~~L~~~G----~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s 76 (242)
T TIGR01459 6 NDYDVFLLDLWGVIIDGNHTYPGAVQNLNKIIAQG----KPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISS 76 (242)
T ss_pred hcCCEEEEecccccccCCccCccHHHHHHHHHHCC----CEEEEEeCCCCChHHHHHHHHHCCCCccccceEEcc
Confidence 457789999999993 566788999999999987 88888654 44444447889999841034555553
No 254
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=95.56 E-value=0.056 Score=55.26 Aligned_cols=40 Identities=20% Similarity=0.326 Sum_probs=28.3
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEEcC
Q 002665 797 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKG 843 (895)
Q Consensus 797 sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaMgN 843 (895)
.|..+++ .++...+++++ +||+.+ | ++|.+.+|.||+.+.
T Consensus 132 ~k~~~l~----~~~~~~~~~v~-iGDs~~-D-~~~~~aa~~~v~~~~ 171 (205)
T PRK13582 132 GKRQAVK----ALKSLGYRVIA-AGDSYN-D-TTMLGEADAGILFRP 171 (205)
T ss_pred hHHHHHH----HHHHhCCeEEE-EeCCHH-H-HHHHHhCCCCEEECC
Confidence 4544444 44444577878 777777 7 999999999998653
No 255
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=95.29 E-value=0.031 Score=55.28 Aligned_cols=54 Identities=9% Similarity=0.014 Sum_probs=45.1
Q ss_pred cEEEEEEecCCC-C----------------------------hhhHHHHHHHHHHHhccCCCCceEEEEEcCC-CHHHHH
Q 002665 610 KYVFVIAADCDT-T----------------------------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTAL-TILELH 659 (895)
Q Consensus 610 ~kli~~DiDGTL-~----------------------------~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR-~~~~~~ 659 (895)
.||++||+|+|| + ...-+...++++.|+++| +.++|+|+. +...+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G----~~l~I~Sn~~~~~~~~ 77 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAG----TYLATASWNDVPEWAY 77 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCC----CEEEEEeCCCChHHHH
Confidence 479999999999 0 124567799999999986 999999988 888888
Q ss_pred HHHHhCCC
Q 002665 660 SLLVSGGL 667 (895)
Q Consensus 660 ~~l~~l~l 667 (895)
.+++.+++
T Consensus 78 ~~L~~~~l 85 (174)
T TIGR01685 78 EILGTFEI 85 (174)
T ss_pred HHHHhCCc
Confidence 88898886
No 256
>PRK14986 glycogen phosphorylase; Provisional
Probab=95.20 E-value=0.083 Score=63.57 Aligned_cols=148 Identities=12% Similarity=0.111 Sum_probs=105.5
Q ss_pred cCCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCC-----cEEEEEecCC--CchhhhhhhHHHHHHHHHHHH---
Q 002665 311 FSNPRKPMILALARPDPKKNITT-LVKAFGECRPLRELA-----NLTLIMGNRD--DIDEMSGTNAALLLSILKLID--- 379 (895)
Q Consensus 311 ~~~~~~~~Il~vgrl~~~Kgi~~-ll~A~~~l~~~~~~~-----~l~livG~~~--~~~~l~~~~~~~~~~i~~~~~--- 379 (895)
.++|+...++++=|+...|...+ ++..+.++..+...+ ..++|.|+.. .+.. ..+++..|+...+
T Consensus 538 ~ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~----aK~iIk~I~~va~~in 613 (815)
T PRK14986 538 VVNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYM----AKHIIHLINDVAKVIN 613 (815)
T ss_pred ccCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHH----HHHHHHHHHHHHHHhc
Confidence 35677888999999999999888 666655554333332 2445554433 3332 2456777777776
Q ss_pred -HcCCCC--CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCC--CCCCChHHHHHHHcCCCEEEcCCCCccccccc--CCc
Q 002665 380 -KYDLYG--QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRV--LDN 452 (895)
Q Consensus 380 -~~~l~~--~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~--~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~--~~~ 452 (895)
.-...+ +|.|+....-.--..++..| ||-.+.|+ .|..|..=+=+|.-|.+.++|..|+..|+.++ +.|
T Consensus 614 ~Dp~v~~~lkVVFlenY~vslAe~lipg~----Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN 689 (815)
T PRK14986 614 NDPQIGDKLKVVFIPNYSVSLAQLIIPAA----DLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEEN 689 (815)
T ss_pred cChhhcCceeEEEeCCCCHHHHHHhhhhh----hhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCc
Confidence 233444 68887776555555666777 99999987 78999999999999999999999999999876 779
Q ss_pred eEEeCCCCHHHHHHH
Q 002665 453 GLLVDPHDQQSIADA 467 (895)
Q Consensus 453 g~lv~p~d~~~la~a 467 (895)
|+++- .+.+++.+-
T Consensus 690 ~~~fG-~~~~ev~~~ 703 (815)
T PRK14986 690 IFIFG-NTAEEVEAL 703 (815)
T ss_pred EEEeC-CCHHHHHHH
Confidence 99994 466665443
No 257
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=94.94 E-value=0.064 Score=64.35 Aligned_cols=148 Identities=14% Similarity=0.101 Sum_probs=104.1
Q ss_pred cCCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCC-----cEEEEEecCC--CchhhhhhhHHHHHHHHHHHHHc-
Q 002665 311 FSNPRKPMILALARPDPKKNITT-LVKAFGECRPLRELA-----NLTLIMGNRD--DIDEMSGTNAALLLSILKLIDKY- 381 (895)
Q Consensus 311 ~~~~~~~~Il~vgrl~~~Kgi~~-ll~A~~~l~~~~~~~-----~l~livG~~~--~~~~l~~~~~~~~~~i~~~~~~~- 381 (895)
.++|+...++++=|+...|...+ ++..+.++.++...| ..++|.|+.. .+.. .......|+...+..
T Consensus 522 ~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~----aK~iIklI~~va~~iN 597 (794)
T TIGR02093 522 EVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYHM----AKLIIKLINSVAEVVN 597 (794)
T ss_pred ccCccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcHH----HHHHHHHHHHHHHHhc
Confidence 45577788899999999998888 666655554333332 2345444433 3322 244666677766442
Q ss_pred ---CCCC--CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCC--CCCCChHHHHHHHcCCCEEEcCCCCccccccc--CCc
Q 002665 382 ---DLYG--QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRV--LDN 452 (895)
Q Consensus 382 ---~l~~--~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~--~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~--~~~ 452 (895)
...+ +|.|+....-.--..++.+| ||-.+.|+ .|..|..=+=+|.-|.+.|+|..|+..|+.++ ..|
T Consensus 598 ~Dp~v~~~lkVVFlenY~VslAe~iipaa----Dvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN 673 (794)
T TIGR02093 598 NDPAVGDKLKVVFVPNYNVSLAELIIPAA----DLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAEN 673 (794)
T ss_pred cChhhCCceeEEEeCCCChHHHHHhhhhh----hhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCccc
Confidence 2344 68888776555556667777 99999987 78899999999999999999999999999876 678
Q ss_pred eEEeCCCCHHHHHHH
Q 002665 453 GLLVDPHDQQSIADA 467 (895)
Q Consensus 453 g~lv~p~d~~~la~a 467 (895)
+++|- .+.+++.+.
T Consensus 674 ~fiFG-~~~~ev~~~ 687 (794)
T TIGR02093 674 IFIFG-LTVEEVEAL 687 (794)
T ss_pred EEEcC-CCHHHHHHH
Confidence 99984 466666544
No 258
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=94.90 E-value=0.073 Score=66.85 Aligned_cols=42 Identities=14% Similarity=0.101 Sum_probs=39.0
Q ss_pred ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 622 TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 622 ~~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
...+.+.++++++.++++| |++.+.||=....+..+.+++|+
T Consensus 545 ~Dppr~~v~~aI~~l~~AG----I~v~MiTGD~~~TA~aIa~~~Gi 586 (917)
T COG0474 545 EDPPREDVKEAIEELREAG----IKVWMITGDHVETAIAIAKECGI 586 (917)
T ss_pred cCCCCccHHHHHHHHHHCC----CcEEEECCCCHHHHHHHHHHcCC
Confidence 3677889999999999997 99999999999999999999997
No 259
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=94.89 E-value=0.15 Score=56.77 Aligned_cols=41 Identities=7% Similarity=0.050 Sum_probs=34.1
Q ss_pred hHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEE
Q 002665 798 RSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 798 Kg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaM 841 (895)
+...+.+.++++|++++++++ +||+.. | ++.=+.+|..++.
T Consensus 274 ~Peifl~A~~~lgl~Peecl~-IGDS~~-D-IeAAk~AGm~~Ig 314 (381)
T PLN02575 274 DPEMFIYAAQLLNFIPERCIV-FGNSNQ-T-VEAAHDARMKCVA 314 (381)
T ss_pred CHHHHHHHHHHcCCCcccEEE-EcCCHH-H-HHHHHHcCCEEEE
Confidence 566788999999999999999 777776 8 9999999975544
No 260
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=94.86 E-value=0.14 Score=61.58 Aligned_cols=52 Identities=17% Similarity=0.134 Sum_probs=48.2
Q ss_pred EEEEEecCCC------ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 612 VFVIAADCDT------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 612 li~~DiDGTL------~~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
.+++..||.+ ...+.+..++++++|++.| +++++.||=+...++.+.+++|+
T Consensus 519 ~v~va~dg~~~g~i~~~D~~R~~a~~aI~~L~~~G----i~~~mLTGDn~~~A~~iA~~lGI 576 (713)
T COG2217 519 VVFVAVDGKLVGVIALADELRPDAKEAIAALKALG----IKVVMLTGDNRRTAEAIAKELGI 576 (713)
T ss_pred EEEEEECCEEEEEEEEeCCCChhHHHHHHHHHHCC----CeEEEEcCCCHHHHHHHHHHcCh
Confidence 8999999977 4788899999999999997 99999999999999999999987
No 261
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=94.84 E-value=0.42 Score=50.56 Aligned_cols=42 Identities=5% Similarity=-0.152 Sum_probs=33.9
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEE
Q 002665 797 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 797 sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaM 841 (895)
-+...+.+.++++|++++++++ +||+.. | +..=+.+|.-++.
T Consensus 165 P~p~~~~~a~~~~~~~~~~~l~-vgDs~~-D-i~aA~~aGi~~i~ 206 (248)
T PLN02770 165 PHPDPYLKALEVLKVSKDHTFV-FEDSVS-G-IKAGVAAGMPVVG 206 (248)
T ss_pred CChHHHHHHHHHhCCChhHEEE-EcCCHH-H-HHHHHHCCCEEEE
Confidence 3456788999999999999999 777776 8 8888888876543
No 262
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=94.77 E-value=0.051 Score=53.23 Aligned_cols=54 Identities=17% Similarity=0.187 Sum_probs=41.9
Q ss_pred cEEEEEEecCCCChh--------------hHHHHHHHHHHHhccCCCCceEEEEEcCC---------------CHHHHHH
Q 002665 610 KYVFVIAADCDTTSD--------------FLEIIKKVVEAAGKDNSAGFIGFVLSTAL---------------TILELHS 660 (895)
Q Consensus 610 ~kli~~DiDGTL~~~--------------~~~~~~~~l~~l~~~g~~~~i~vviaTGR---------------~~~~~~~ 660 (895)
.|+++||.||||... .-+...++|+.|+++| +.++|+|-- +...+..
T Consensus 1 ~~~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~g----~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~ 76 (161)
T TIGR01261 1 QKILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKKAG----YKFVMVTNQDGLGTPSFPQADFDGPHNLMLQ 76 (161)
T ss_pred CCEEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHHCC----CeEEEEeCCccccCCcCCHHHHHHHHHHHHH
Confidence 478999999999432 2255889999999987 888899864 3456677
Q ss_pred HHHhCCC
Q 002665 661 LLVSGGL 667 (895)
Q Consensus 661 ~l~~l~l 667 (895)
+++.+|+
T Consensus 77 ~l~~~gl 83 (161)
T TIGR01261 77 IFRSQGI 83 (161)
T ss_pred HHHHCCC
Confidence 8899888
No 263
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=94.75 E-value=0.051 Score=54.45 Aligned_cols=42 Identities=7% Similarity=-0.061 Sum_probs=34.0
Q ss_pred ccEEEEEEecCCCC------------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCC
Q 002665 609 RKYVFVIAADCDTT------------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALT 654 (895)
Q Consensus 609 ~~kli~~DiDGTL~------------~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~ 654 (895)
..|+++||.||||. -...+...++|++|+++| +.++|+|..+
T Consensus 2 ~~~~~~~d~~~t~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~g----~~l~I~Tn~~ 55 (181)
T PRK08942 2 SMKAIFLDRDGVINVDSDGYVKSPDEWIPIPGSIEAIARLKQAG----YRVVVATNQS 55 (181)
T ss_pred CccEEEEECCCCcccCCccccCCHHHeEECCCHHHHHHHHHHCC----CEEEEEeCCc
Confidence 46899999999992 124456788999999986 9999999875
No 264
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=94.70 E-value=0.11 Score=53.25 Aligned_cols=41 Identities=17% Similarity=0.179 Sum_probs=35.0
Q ss_pred hHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEE
Q 002665 798 RSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 798 Kg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaM 841 (895)
+-..+..+++++|++++++++ +||+.+ | +++-+.+|..++.
T Consensus 143 ~p~~~~~~~~~~~~~~~~~~~-igDs~~-d-~~aa~~aG~~~i~ 183 (213)
T TIGR01449 143 HPDPLLLAAERLGVAPQQMVY-VGDSRV-D-IQAARAAGCPSVL 183 (213)
T ss_pred ChHHHHHHHHHcCCChhHeEE-eCCCHH-H-HHHHHHCCCeEEE
Confidence 467899999999999999988 777777 8 9999999976654
No 265
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=94.65 E-value=0.15 Score=52.87 Aligned_cols=43 Identities=16% Similarity=0.136 Sum_probs=34.7
Q ss_pred hHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcc---eEEEEcC
Q 002665 798 RSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVH---KTVILKG 843 (895)
Q Consensus 798 Kg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag---~gVaMgN 843 (895)
.-..+..+++.+|+++++++. +||+.+ | +.|=+.|| .||..|.
T Consensus 147 ~P~~l~~~~~~~~~~~~~~l~-VGDs~~-D-i~aA~~Ag~~~v~v~~g~ 192 (220)
T COG0546 147 DPEPLLLLLEKLGLDPEEALM-VGDSLN-D-ILAAKAAGVPAVGVTWGY 192 (220)
T ss_pred CHHHHHHHHHHhCCChhheEE-ECCCHH-H-HHHHHHcCCCEEEEECCC
Confidence 457788999999999767877 888888 8 99999998 4555554
No 266
>PLN02534 UDP-glycosyltransferase
Probab=94.59 E-value=12 Score=43.67 Aligned_cols=77 Identities=18% Similarity=0.131 Sum_probs=50.2
Q ss_pred CEEeCCCCCCCcHHHHHHHhhcCCcE--EEecCCCCCCChHHHHHHHcCCCEEEcCCCCccc-----ccccCCceEEeC-
Q 002665 386 QVAYPKHHKQSDVPDIYRLAAKTKGV--FINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVD-----IHRVLDNGLLVD- 457 (895)
Q Consensus 386 ~v~~~g~~~~~el~~ly~~a~~~~Dv--~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~e-----iv~~~~~g~lv~- 457 (895)
.+.+.+++|+.+ ++... ++ || ..+-..+++||+++|+|+|+-...+-.- +++.-..|+-+.
T Consensus 345 g~~v~~w~pq~~---iL~h~----~v~~fv----tH~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~ 413 (491)
T PLN02534 345 GLLIKGWAPQVL---ILSHP----AIGGFL----THCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGV 413 (491)
T ss_pred CeeccCCCCHHH---HhcCC----ccceEE----ecCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEecc
Confidence 566778988755 55555 44 55 3455678999999999999987643211 111222344331
Q ss_pred --------------CCCHHHHHHHHHHHhh
Q 002665 458 --------------PHDQQSIADALLKLVS 473 (895)
Q Consensus 458 --------------p~d~~~la~ai~~ll~ 473 (895)
--+.+++++++++++.
T Consensus 414 ~~~~~~~~~~~~~~~v~~eev~~~v~~~m~ 443 (491)
T PLN02534 414 EVPVRWGDEERVGVLVKKDEVEKAVKTLMD 443 (491)
T ss_pred cccccccccccccCccCHHHHHHHHHHHhc
Confidence 1268899999999996
No 267
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=94.53 E-value=0.023 Score=56.13 Aligned_cols=90 Identities=18% Similarity=0.224 Sum_probs=59.6
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCC--------cccccccCCceEEe
Q 002665 385 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGG--------PVDIHRVLDNGLLV 456 (895)
Q Consensus 385 ~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg--------~~eiv~~~~~g~lv 456 (895)
.++.+.++. +++..+|+.| |+++. -+-+.++.|++++|+|.|.-.... ....+.+...|..+
T Consensus 55 ~~v~~~~~~--~~m~~~m~~a----DlvIs----~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~ 124 (167)
T PF04101_consen 55 PNVKVFGFV--DNMAELMAAA----DLVIS----HAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIML 124 (167)
T ss_dssp CCCEEECSS--SSHHHHHHHH----SEEEE----CS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCS
T ss_pred CcEEEEech--hhHHHHHHHc----CEEEe----CCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCcccc
Confidence 578888884 6799999999 98874 466789999999999988766544 12222333344444
Q ss_pred CCC--CHHHHHHHHHHHhhCHHHHHHHHHH
Q 002665 457 DPH--DQQSIADALLKLVSDKQLWERCRQN 484 (895)
Q Consensus 457 ~p~--d~~~la~ai~~ll~~~~~~~~~~~~ 484 (895)
... +++.+.++|.+++.++..+..+.++
T Consensus 125 ~~~~~~~~~L~~~i~~l~~~~~~~~~~~~~ 154 (167)
T PF04101_consen 125 DESELNPEELAEAIEELLSDPEKLKEMAKA 154 (167)
T ss_dssp ECCC-SCCCHHHHHHCHCCCHH-SHHHCCC
T ss_pred CcccCCHHHHHHHHHHHHcCcHHHHHHHHH
Confidence 322 4688999999999988765555444
No 268
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=94.52 E-value=0.06 Score=62.57 Aligned_cols=65 Identities=12% Similarity=0.174 Sum_probs=49.7
Q ss_pred cccEEEEEEecCCCCh--h-------------hHHHHHHHHHHHhccCCCCceEEEEEcCCCH------------HHHHH
Q 002665 608 RRKYVFVIAADCDTTS--D-------------FLEIIKKVVEAAGKDNSAGFIGFVLSTALTI------------LELHS 660 (895)
Q Consensus 608 ~~~kli~~DiDGTL~~--~-------------~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~------------~~~~~ 660 (895)
...|+++||+||||.. . ..+...+.|+.|+++| ..++|+|--+- ..+..
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~G----y~IvIvTNQ~gI~~G~~~~~~~~~ki~~ 241 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEADG----FKICIFTNQGGIARGKINADDFKAKIEA 241 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHCC----CEEEEEECCcccccCcccHHHHHHHHHH
Confidence 5679999999999931 1 2456788999999987 99999987544 34678
Q ss_pred HHHhCCCCCCCCCEEEeCC
Q 002665 661 LLVSGGLSPLAFDAFICNS 679 (895)
Q Consensus 661 ~l~~l~l~~~~~d~~I~~n 679 (895)
++++++++ ++.++|..
T Consensus 242 iL~~lgip---fdviia~~ 257 (526)
T TIGR01663 242 IVAKLGVP---FQVFIAIG 257 (526)
T ss_pred HHHHcCCc---eEEEEeCC
Confidence 89999984 57777654
No 269
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=94.51 E-value=0.17 Score=61.04 Aligned_cols=149 Identities=15% Similarity=0.118 Sum_probs=104.1
Q ss_pred cCCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCC-----cEEEEEecCCCchhhhhhhHHHHHHHHHHHHHc---
Q 002665 311 FSNPRKPMILALARPDPKKNITT-LVKAFGECRPLRELA-----NLTLIMGNRDDIDEMSGTNAALLLSILKLIDKY--- 381 (895)
Q Consensus 311 ~~~~~~~~Il~vgrl~~~Kgi~~-ll~A~~~l~~~~~~~-----~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~--- 381 (895)
..+|+...++++=|+...|...+ ++..+.++.++...+ ..++|.|+....... ...+....|+...+..
T Consensus 525 ~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~--~aK~iIklI~~va~~in~D 602 (797)
T cd04300 525 EVDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYY--MAKLIIKLINAVADVVNND 602 (797)
T ss_pred ccCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcH--HHHHHHHHHHHHHHHhccC
Confidence 34678889999999999999888 666655443333332 244555544322221 1244667777776632
Q ss_pred -CCCC--CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCC--CCCCChHHHHHHHcCCCEEEcCCCCccccccc--CCceE
Q 002665 382 -DLYG--QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRV--LDNGL 454 (895)
Q Consensus 382 -~l~~--~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~--~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~--~~~g~ 454 (895)
...+ +|.|+....-.--..++.+| ||-.+.|+ .|..|..=+=+|.-|.+.|+|..|+..|+.++ ..|++
T Consensus 603 p~v~~~lkVVFlenY~VslAe~iipaa----Dvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vG~eN~f 678 (797)
T cd04300 603 PDVGDKLKVVFLPNYNVSLAEKIIPAA----DLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIF 678 (797)
T ss_pred hhcCCceEEEEeCCCChHHHHHhhhhh----hhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHhCcCcEE
Confidence 3444 67887776555555666777 99999987 78899999999999999999999999999876 67899
Q ss_pred EeCCCCHHHHHH
Q 002665 455 LVDPHDQQSIAD 466 (895)
Q Consensus 455 lv~p~d~~~la~ 466 (895)
+|- .+.+++.+
T Consensus 679 iFG-~~~~ev~~ 689 (797)
T cd04300 679 IFG-LTAEEVEA 689 (797)
T ss_pred EeC-CCHHHHHH
Confidence 994 46655544
No 270
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=94.49 E-value=0.099 Score=55.39 Aligned_cols=67 Identities=10% Similarity=0.075 Sum_probs=47.6
Q ss_pred cccEEEEEEecCCCC-----------------------------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHH--
Q 002665 608 RRKYVFVIAADCDTT-----------------------------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTIL-- 656 (895)
Q Consensus 608 ~~~kli~~DiDGTL~-----------------------------~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~-- 656 (895)
.++..|++|||+|+. ...-+.+.++++.|+++| +.++|+|+|+..
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~G----~~v~iVTnR~~~~~ 148 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSKG----VKIFYVSNRSEKEK 148 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHCC----CeEEEEeCCCcchH
Confidence 456799999999991 112356688899998886 899999999843
Q ss_pred -HHHHHHHhCCCCCCCCCEEEeC
Q 002665 657 -ELHSLLVSGGLSPLAFDAFICN 678 (895)
Q Consensus 657 -~~~~~l~~l~l~~~~~d~~I~~ 678 (895)
.+...++.+|++....+.++..
T Consensus 149 ~~T~~~Lkk~Gi~~~~~d~lllr 171 (266)
T TIGR01533 149 AATLKNLKRFGFPQADEEHLLLK 171 (266)
T ss_pred HHHHHHHHHcCcCCCCcceEEeC
Confidence 4557888888842112345443
No 271
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=94.42 E-value=0.044 Score=59.82 Aligned_cols=56 Identities=4% Similarity=-0.094 Sum_probs=47.6
Q ss_pred cccEEEEEEecCCCCh---------------hhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 608 RRKYVFVIAADCDTTS---------------DFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 608 ~~~kli~~DiDGTL~~---------------~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
.+.+++++|+|||+.. .+.+...++++.|+++| +.++++|||+.......++.+++
T Consensus 156 ~~~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g----~~i~i~T~r~~~~~~~~l~~l~~ 226 (300)
T PHA02530 156 GLPKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAAG----YEIIVVSGRDGVCEEDTVEWLRQ 226 (300)
T ss_pred CCCCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhCC----CEEEEEeCCChhhHHHHHHHHHH
Confidence 3568999999999932 35678899999999986 99999999999999888888776
No 272
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=94.37 E-value=0.072 Score=52.76 Aligned_cols=56 Identities=7% Similarity=0.033 Sum_probs=46.0
Q ss_pred cccEEEEEEecCCCC----hhhHHHHHHHHHHHhccCCCCceEEEEEcCCC-HHHHHHHHHhCCC
Q 002665 608 RRKYVFVIAADCDTT----SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALT-ILELHSLLVSGGL 667 (895)
Q Consensus 608 ~~~kli~~DiDGTL~----~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~-~~~~~~~l~~l~l 667 (895)
...+++++|+||||+ ....+.+.++|+.|++.| +.++|+|+.+ ...+..+++.+++
T Consensus 23 ~~v~~vv~D~Dgtl~~~~~~~~~pgv~e~L~~Lk~~g----~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYPDHNEAYPALRDWIEELKAAG----RKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CCCCEEEEecCCccccCCCCCcChhHHHHHHHHHHcC----CEEEEEeCCchHHHHHHHHHHcCC
Confidence 456899999999994 256778899999999986 8999999998 5666667777776
No 273
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=94.36 E-value=0.074 Score=53.00 Aligned_cols=40 Identities=15% Similarity=0.209 Sum_probs=32.5
Q ss_pred EEEEEEecCCCCh-----------hhHHHHHHHHHHHhccCCCCceEEEEEcCCC
Q 002665 611 YVFVIAADCDTTS-----------DFLEIIKKVVEAAGKDNSAGFIGFVLSTALT 654 (895)
Q Consensus 611 kli~~DiDGTL~~-----------~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~ 654 (895)
|++|+|.||||.. ...+...++|+.|+++| ++++|+|.-+
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G----~~l~i~TN~~ 52 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKKMG----YALVLVTNQS 52 (176)
T ss_pred CEEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHHCC----CEEEEEeCCc
Confidence 7899999999941 12356899999999987 9999999655
No 274
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=94.18 E-value=0.034 Score=56.50 Aligned_cols=45 Identities=16% Similarity=0.257 Sum_probs=40.4
Q ss_pred CChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEEcC
Q 002665 796 ASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKG 843 (895)
Q Consensus 796 ~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaMgN 843 (895)
-+|+.+++.+++++|++++++++ +||+.+ | ++|++.+|.++|+..
T Consensus 146 ~~k~~~~~~~~~~~~~~~~~~i~-iGDs~~-D-~~~a~~ag~~~a~~~ 190 (201)
T TIGR01491 146 DNKGEAVERLKRELNPSLTETVA-VGDSKN-D-LPMFEVADISISLGD 190 (201)
T ss_pred ccHHHHHHHHHHHhCCCHHHEEE-EcCCHh-H-HHHHHhcCCeEEECC
Confidence 46999999999999999999988 777777 8 999999999999964
No 275
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=93.88 E-value=0.17 Score=52.80 Aligned_cols=35 Identities=11% Similarity=0.004 Sum_probs=27.4
Q ss_pred HHHHHHHHhccCCCCceEEEEEcCCC----HHHHHHHHHhCCC
Q 002665 629 IKKVVEAAGKDNSAGFIGFVLSTALT----ILELHSLLVSGGL 667 (895)
Q Consensus 629 ~~~~l~~l~~~g~~~~i~vviaTGR~----~~~~~~~l~~l~l 667 (895)
.+++++.|+++| +.++++|||+ ...+..+++.+++
T Consensus 119 a~elL~~L~~~G----~~I~iVTnR~~~k~~~t~~~Llk~~gi 157 (237)
T PRK11009 119 ARQLIDMHVKRG----DSIYFITGRTATKTETVSKTLADDFHI 157 (237)
T ss_pred HHHHHHHHHHCC----CeEEEEeCCCCcccHHHHHHHHHHcCC
Confidence 788899998886 9999999996 3345555666888
No 276
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=93.82 E-value=0.12 Score=56.85 Aligned_cols=55 Identities=9% Similarity=0.023 Sum_probs=47.3
Q ss_pred ccEEEEEEecCCCC------h--------hhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHh----CCC
Q 002665 609 RKYVFVIAADCDTT------S--------DFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVS----GGL 667 (895)
Q Consensus 609 ~~kli~~DiDGTL~------~--------~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~----l~l 667 (895)
.+|+|++|+|+||- . ...+.+.++|+.|+++| +.++|||-.+...+...++. +++
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~~G----i~lai~S~n~~~~a~~~l~~~~~~~~~ 74 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKKQG----FLLALASKNDEDDAKKVFERRKDFILQ 74 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHhCC----CEEEEEcCCCHHHHHHHHHhCccccCc
Confidence 47999999999991 1 23577899999999987 99999999999999999998 666
No 277
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=93.80 E-value=0.37 Score=48.16 Aligned_cols=41 Identities=5% Similarity=-0.023 Sum_probs=33.8
Q ss_pred CChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEE
Q 002665 796 ASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTV 839 (895)
Q Consensus 796 ~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gV 839 (895)
--+-..+++.++++|+++++++. +||+.+ | +..-+.+|..+
T Consensus 141 kp~p~~~~~~~~~~~~~~~~~v~-vgD~~~-d-i~aA~~aG~~~ 181 (185)
T TIGR01990 141 KPDPEIFLAAAEGLGVSPSECIG-IEDAQA-G-IEAIKAAGMFA 181 (185)
T ss_pred CCChHHHHHHHHHcCCCHHHeEE-EecCHH-H-HHHHHHcCCEE
Confidence 34677889999999999999999 777777 8 98888888654
No 278
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=93.79 E-value=0.16 Score=48.62 Aligned_cols=57 Identities=9% Similarity=0.017 Sum_probs=51.3
Q ss_pred cccEEEEEEecCCC----ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCC
Q 002665 608 RRKYVFVIAADCDT----TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 668 (895)
Q Consensus 608 ~~~kli~~DiDGTL----~~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~ 668 (895)
...|-|++|+|.|| ....+++.++.+..++++| ++++|.|--+..-+..+.+.++++
T Consensus 26 ~Gikgvi~DlDNTLv~wd~~~~tpe~~~W~~e~k~~g----i~v~vvSNn~e~RV~~~~~~l~v~ 86 (175)
T COG2179 26 HGIKGVILDLDNTLVPWDNPDATPELRAWLAELKEAG----IKVVVVSNNKESRVARAAEKLGVP 86 (175)
T ss_pred cCCcEEEEeccCceecccCCCCCHHHHHHHHHHHhcC----CEEEEEeCCCHHHHHhhhhhcCCc
Confidence 56799999999999 3678889999999999997 999999999888899999999984
No 279
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=93.78 E-value=0.4 Score=51.05 Aligned_cols=41 Identities=12% Similarity=0.117 Sum_probs=33.7
Q ss_pred hHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEE
Q 002665 798 RSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 798 Kg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaM 841 (895)
+...+...++++|++++++++ +||+.. | ++.=+.+|..++.
T Consensus 167 ~Pe~~~~a~~~l~~~p~~~l~-IgDs~~-D-i~aA~~aG~~~i~ 207 (260)
T PLN03243 167 DPEMFMYAAERLGFIPERCIV-FGNSNS-S-VEAAHDGCMKCVA 207 (260)
T ss_pred CHHHHHHHHHHhCCChHHeEE-EcCCHH-H-HHHHHHcCCEEEE
Confidence 356788999999999999999 777776 8 9999999975543
No 280
>PRK11587 putative phosphatase; Provisional
Probab=93.67 E-value=0.66 Score=47.88 Aligned_cols=44 Identities=9% Similarity=-0.069 Sum_probs=34.6
Q ss_pred hHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcce-EEEEcCc
Q 002665 798 RSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHK-TVILKGV 844 (895)
Q Consensus 798 Kg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~-gVaMgNA 844 (895)
+.......++++|++++++++ +||+-. | +..=+.+|. .|++.+.
T Consensus 140 ~p~~~~~~~~~~g~~p~~~l~-igDs~~-d-i~aA~~aG~~~i~v~~~ 184 (218)
T PRK11587 140 EPDAYLLGAQLLGLAPQECVV-VEDAPA-G-VLSGLAAGCHVIAVNAP 184 (218)
T ss_pred CcHHHHHHHHHcCCCcccEEE-Eecchh-h-hHHHHHCCCEEEEECCC
Confidence 456678888999999999999 777766 7 998889996 4666544
No 281
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=93.41 E-value=0.56 Score=55.74 Aligned_cols=153 Identities=17% Similarity=0.112 Sum_probs=87.9
Q ss_pred hhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCceEecCCCCCCCCCCCCcccCcc
Q 002665 624 DFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYYPSSSTEDNHGLPFLVDLD 703 (895)
Q Consensus 624 ~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~~~~~~~~~~~~~~~~d~~ 703 (895)
-+...+.+++.+.+++| ++++..||+.+..+..+.++.|+ |. -|+++.
T Consensus 590 PPR~~vP~Av~~CrsAG----IkvimVTgdhpiTAkAiA~~vgI--------i~-~~~et~------------------- 637 (1019)
T KOG0203|consen 590 PPRAAVPDAVGKCRSAG----IKVIMVTGDHPITAKAIAKSVGI--------IS-EGSETV------------------- 637 (1019)
T ss_pred CCcccCchhhhhhhhhC----ceEEEEecCccchhhhhhhheee--------ec-CCchhh-------------------
Confidence 45556778888999987 99999999999999999988775 11 111111
Q ss_pred hhhhhccccCcchHHHHHHHHhhhccCCCCccCcccccccccccceEEEEEecCCCCCcCHHHHHHHHHhhcCeEEEEEe
Q 002665 704 YRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMIPPVKELRKLMRIQALRCHVIYC 783 (895)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~s 783 (895)
+...++.+....+. .....|.......+-..-..+++.+.+..+ .+.-+.++
T Consensus 638 --------------e~~a~r~~~~v~~v-------------n~~~a~a~VihG~eL~~~~~~qld~il~nh-~eIVFART 689 (1019)
T KOG0203|consen 638 --------------EDIAKRLNIPVEQV-------------NSRDAKAAVIHGSELPDMSSEQLDELLQNH-QEIVFART 689 (1019)
T ss_pred --------------hhhHHhcCCccccc-------------CccccceEEEecccccccCHHHHHHHHHhC-CceEEEec
Confidence 11111211111110 001112222212111122234666666543 23444555
Q ss_pred eCCeeEEeecCCCChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEEcCchhhh-HhhhhcC
Q 002665 784 QNGTKLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESA-RKLHANR 855 (895)
Q Consensus 784 ~~~~~lEI~p~g~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaMgNA~~~~-~~~~~~~ 855 (895)
.+..-+=|+ .+ |+++| ++++.-||+-| | -+-|+.|++|||||=|- + --|+++|
T Consensus 690 SPqQKLiIV-e~----------cQr~G----aiVaVTGDGVN-D-sPALKKADIGVAMGiaG--SDvsKqAAD 743 (1019)
T KOG0203|consen 690 SPQQKLIIV-EG----------CQRQG----AIVAVTGDGVN-D-SPALKKADIGVAMGIAG--SDVSKQAAD 743 (1019)
T ss_pred CccceEEeE-hh----------hhhcC----cEEEEeCCCcC-C-Chhhcccccceeecccc--chHHHhhcc
Confidence 554223332 22 45555 58888999999 8 99999999999999776 5 4466666
No 282
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=93.40 E-value=0.19 Score=54.36 Aligned_cols=41 Identities=15% Similarity=0.073 Sum_probs=34.6
Q ss_pred HHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEEc
Q 002665 799 SQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILK 842 (895)
Q Consensus 799 g~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaMg 842 (895)
...+..+++++|++++++++ +||+.+ | +++=+.+|..++.-
T Consensus 205 p~~~~~a~~~~~~~p~~~l~-IGDs~~-D-i~aA~~aG~~~i~v 245 (286)
T PLN02779 205 PDIYNLAAETLGVDPSRCVV-VEDSVI-G-LQAAKAAGMRCIVT 245 (286)
T ss_pred HHHHHHHHHHhCcChHHEEE-EeCCHH-h-HHHHHHcCCEEEEE
Confidence 55789999999999999999 777777 7 99999999776654
No 283
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=93.39 E-value=0.42 Score=46.07 Aligned_cols=78 Identities=14% Similarity=0.054 Sum_probs=43.0
Q ss_pred CCCcEEEeccC-CchHHHHHHhccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEe
Q 002665 146 IWPVAIHGHYA-DAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVIT 224 (895)
Q Consensus 146 ~~pDvIh~h~~-~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~ 224 (895)
..+|+|.+... +.+.+-.+.....++|.++.+|.-...+ =...+. . -...|.+. .....-.||.|+.
T Consensus 58 ~~~dll~aTsmldLa~l~gL~p~l~~~p~ilYFHENQl~Y---P~~~~~--~--rd~~~~~~-----ni~saLaAD~v~F 125 (168)
T PF12038_consen 58 HSYDLLFATSMLDLATLRGLRPDLANVPKILYFHENQLAY---PVSPGQ--E--RDFQYGMN-----NIYSALAADRVVF 125 (168)
T ss_pred cCCCEEEeeccccHHHHHhhccCCCCCCEEEEEecCcccC---CCCCCc--c--ccccHHHH-----HHHHHHhceeeee
Confidence 45899999875 3222222333556799999999642111 000111 1 11122222 2335668999999
Q ss_pred cCHHHHHHHHH
Q 002665 225 STRQEIEEQWR 235 (895)
Q Consensus 225 ~s~~~~~~~~~ 235 (895)
.|....+.+..
T Consensus 126 NS~~nr~sFL~ 136 (168)
T PF12038_consen 126 NSAFNRDSFLD 136 (168)
T ss_pred cchhhHHHHHH
Confidence 99877665544
No 284
>PRK08238 hypothetical protein; Validated
Probab=93.33 E-value=0.19 Score=58.24 Aligned_cols=48 Identities=23% Similarity=0.263 Sum_probs=41.6
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCce
Q 002665 627 EIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSE 682 (895)
Q Consensus 627 ~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~ 682 (895)
+...+.+++++++| +.++|+|+.+...++.+++.+|+ +|.+||+++..
T Consensus 75 pga~e~L~~lk~~G----~~v~LaTas~~~~a~~i~~~lGl----Fd~Vigsd~~~ 122 (479)
T PRK08238 75 EEVLDYLRAERAAG----RKLVLATASDERLAQAVAAHLGL----FDGVFASDGTT 122 (479)
T ss_pred hhHHHHHHHHHHCC----CEEEEEeCCCHHHHHHHHHHcCC----CCEEEeCCCcc
Confidence 56788888888886 99999999999999999999997 57899988754
No 285
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=93.09 E-value=0.25 Score=58.13 Aligned_cols=84 Identities=17% Similarity=0.163 Sum_probs=54.5
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCC----cccccccCCceEEeCCC-
Q 002665 385 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGG----PVDIHRVLDNGLLVDPH- 459 (895)
Q Consensus 385 ~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg----~~eiv~~~~~g~lv~p~- 459 (895)
.++.+..++|+.++ +... +.++|+ .-|.-.++.||+.+|+|+|+-..-| ....+.+.+.|+.++..
T Consensus 323 ~n~~~~~W~PQ~~l---L~hp--~v~~fi----tHgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~ 393 (500)
T PF00201_consen 323 KNVLIVKWLPQNDL---LAHP--RVKLFI----THGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKND 393 (500)
T ss_dssp TTEEEESS--HHHH---HTST--TEEEEE----ES--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC
T ss_pred ceEEEeccccchhh---hhcc--cceeee----eccccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecC
Confidence 47888899987654 4433 115555 3565678999999999999987533 33344455678888654
Q ss_pred -CHHHHHHHHHHHhhCHHH
Q 002665 460 -DQQSIADALLKLVSDKQL 477 (895)
Q Consensus 460 -d~~~la~ai~~ll~~~~~ 477 (895)
+.+++.++|.++|+|++-
T Consensus 394 ~~~~~l~~ai~~vl~~~~y 412 (500)
T PF00201_consen 394 LTEEELRAAIREVLENPSY 412 (500)
T ss_dssp -SHHHHHHHHHHHHHSHHH
T ss_pred CcHHHHHHHHHHHHhhhHH
Confidence 578999999999999853
No 286
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=93.07 E-value=0.19 Score=48.51 Aligned_cols=54 Identities=15% Similarity=0.038 Sum_probs=44.0
Q ss_pred ccEEEEEEecCCCCh-----------------------------hhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHH
Q 002665 609 RKYVFVIAADCDTTS-----------------------------DFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELH 659 (895)
Q Consensus 609 ~~kli~~DiDGTL~~-----------------------------~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~ 659 (895)
+++++++|+||||.+ ..-+...+.|+.|+ ++ +.++|+|.-+...+.
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~-~~----~~l~I~Ts~~~~~~~ 75 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRAS-EL----FELVVFTAGLRMYAD 75 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHH-hc----cEEEEEeCCcHHHHH
Confidence 478999999999921 12456788999997 44 899999999999999
Q ss_pred HHHHhCCC
Q 002665 660 SLLVSGGL 667 (895)
Q Consensus 660 ~~l~~l~l 667 (895)
.+++.+++
T Consensus 76 ~il~~l~~ 83 (148)
T smart00577 76 PVLDLLDP 83 (148)
T ss_pred HHHHHhCc
Confidence 99998876
No 287
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=92.94 E-value=0.6 Score=54.09 Aligned_cols=39 Identities=21% Similarity=0.403 Sum_probs=31.9
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEE
Q 002665 797 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 797 sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaM 841 (895)
.|++-++-|.++-|- .+.| +||++| | .+|++.|..||-.
T Consensus 768 QKA~v~~llq~~t~k---rvc~-IGDGGN-D-VsMIq~A~~GiGI 806 (1051)
T KOG0210|consen 768 QKAQVVRLLQKKTGK---RVCA-IGDGGN-D-VSMIQAADVGIGI 806 (1051)
T ss_pred HHHHHHHHHHHhhCc---eEEE-EcCCCc-c-chheeecccceee
Confidence 699999999888883 3555 899888 9 9999998877744
No 288
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=92.93 E-value=0.2 Score=60.25 Aligned_cols=147 Identities=16% Similarity=0.173 Sum_probs=103.4
Q ss_pred cCCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCC-----cEEEEEecCC--CchhhhhhhHHHHHHHHHHHHHcC
Q 002665 311 FSNPRKPMILALARPDPKKNITT-LVKAFGECRPLRELA-----NLTLIMGNRD--DIDEMSGTNAALLLSILKLIDKYD 382 (895)
Q Consensus 311 ~~~~~~~~Il~vgrl~~~Kgi~~-ll~A~~~l~~~~~~~-----~l~livG~~~--~~~~l~~~~~~~~~~i~~~~~~~~ 382 (895)
.++|+...++++=|+...|...+ ++....++.++...| ..++|.|+.. .+.. .......|+...+..+
T Consensus 524 ~ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~----aK~iIklI~~va~~in 599 (798)
T PRK14985 524 EINPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYL----AKNIIFAINKVAEVIN 599 (798)
T ss_pred ccCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHH----HHHHHHHHHHHHHHhc
Confidence 35577788888999999998887 666655554433332 2445544433 3333 2445667777765543
Q ss_pred ----CCC--CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCC--CCCCChHHHHHHHcCCCEEEcCCCCccccccc--CCc
Q 002665 383 ----LYG--QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRV--LDN 452 (895)
Q Consensus 383 ----l~~--~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~--~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~--~~~ 452 (895)
..+ +|.|+....-.--..++.+| ||-.+.|+ .|..|..=+=+|.-|++.++|..|+..|+.++ +.|
T Consensus 600 ~Dp~v~~~lkVVFlenY~VslAe~lipaa----Dvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN 675 (798)
T PRK14985 600 NDPLVGDKLKVVFLPDYCVSAAELLIPAA----DISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEEN 675 (798)
T ss_pred CChhhCCceeEEEeCCCChHHHHHHhhhh----hhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcCc
Confidence 334 67888776555555667777 99999987 78899999999999999999999999999875 678
Q ss_pred eEEeCCCCHHHHHH
Q 002665 453 GLLVDPHDQQSIAD 466 (895)
Q Consensus 453 g~lv~p~d~~~la~ 466 (895)
+++|- .+.+++.+
T Consensus 676 ~f~fG-~~~~ev~~ 688 (798)
T PRK14985 676 IFIFG-HTVEQVKA 688 (798)
T ss_pred EEEeC-CCHHHHHH
Confidence 99995 35555543
No 289
>PRK06769 hypothetical protein; Validated
Probab=92.89 E-value=0.14 Score=50.77 Aligned_cols=56 Identities=13% Similarity=0.077 Sum_probs=41.4
Q ss_pred cccEEEEEEecCCCC----------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHH--------HHHHHHHhCCC
Q 002665 608 RRKYVFVIAADCDTT----------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTIL--------ELHSLLVSGGL 667 (895)
Q Consensus 608 ~~~kli~~DiDGTL~----------~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~--------~~~~~l~~l~l 667 (895)
...|+|++|.||||. -..-+..+++|+.|+++| ++++|+|+-+.. .+...++.+++
T Consensus 2 ~~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G----~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~ 75 (173)
T PRK06769 2 TNIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANH----IKIFSFTNQPGIADGIATIADFVQELKGFGF 75 (173)
T ss_pred CCCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCC----CEEEEEECCchhcCCcCCHHHHHHHHHhCCc
Confidence 357899999999992 123577899999999987 999999986531 23344666666
No 290
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=92.85 E-value=0.65 Score=55.28 Aligned_cols=55 Identities=7% Similarity=-0.022 Sum_probs=45.6
Q ss_pred cccEEEEEEecCCCChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 608 RRKYVFVIAADCDTTSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 608 ~~~kli~~DiDGTL~~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
....|.|+-+=|=++ .+.++.+++++.+++.| ++|...||-....+..+.+++|+
T Consensus 569 ~E~~LtFvGlVGi~D-PPR~ev~~ai~~c~~aG----IrV~mITGD~~~TA~AI~r~iGi 623 (972)
T KOG0202|consen 569 AESDLTFVGLVGILD-PPRPEVADAIELCRQAG----IRVIMITGDNKETAEAIAREIGI 623 (972)
T ss_pred cccceEEEEEeeccC-CCchhHHHHHHHHHHcC----CEEEEEcCCCHHHHHHHHHHhCC
Confidence 345677766666553 45667899999999987 99999999999999999999998
No 291
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=92.68 E-value=0.93 Score=54.07 Aligned_cols=149 Identities=12% Similarity=0.158 Sum_probs=88.8
Q ss_pred cCCCCCcEEEEEeCCCCCCCHHH-HH---HHHHhccccc--CCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHc---
Q 002665 311 FSNPRKPMILALARPDPKKNITT-LV---KAFGECRPLR--ELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKY--- 381 (895)
Q Consensus 311 ~~~~~~~~Il~vgrl~~~Kgi~~-ll---~A~~~l~~~~--~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~--- 381 (895)
.++|+...++++-|+...|...+ ++ .-+.+++... ....+++|.|+....... ...++...|+...+..
T Consensus 439 ~ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~d~--~gK~iIk~I~~va~~in~D 516 (713)
T PF00343_consen 439 ELDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPGDY--MGKEIIKLINNVAEVINND 516 (713)
T ss_dssp ---TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT-H--HHHHHHHHHHHHHHHHCT-
T ss_pred CCCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCCcH--HHHHHHHHHHHHHHHHhcC
Confidence 34677788899999999999777 33 4444554321 112344555544322221 1244566666666542
Q ss_pred -CCCC--CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCC--CCCCChHHHHHHHcCCCEEEcCCCCccccccc--CCceE
Q 002665 382 -DLYG--QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRV--LDNGL 454 (895)
Q Consensus 382 -~l~~--~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~--~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~--~~~g~ 454 (895)
...+ +|.|+...+-.--..++..| ||-+++|+ .|..|..-+=+|.-|.+.+++..|+..|+.+. ..+.+
T Consensus 517 p~v~~~lkVvFlenYdvslA~~lipg~----DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~eN~f 592 (713)
T PF00343_consen 517 PEVGDRLKVVFLENYDVSLAEKLIPGV----DVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGEENIF 592 (713)
T ss_dssp TTTCCGEEEEEETT-SHHHHHHHGGG-----SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-GGGSE
T ss_pred hhhccceeEEeecCCcHHHHHHHhhhh----hhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhcCCCcEE
Confidence 3334 67887776444455566666 99999997 79999999999999999999999999999764 35788
Q ss_pred EeCCCCHHHHHH
Q 002665 455 LVDPHDQQSIAD 466 (895)
Q Consensus 455 lv~p~d~~~la~ 466 (895)
++- .+.+++.+
T Consensus 593 iFG-~~~~ev~~ 603 (713)
T PF00343_consen 593 IFG-LTAEEVEE 603 (713)
T ss_dssp EES--BHHHHHH
T ss_pred EcC-CCHHHHHH
Confidence 884 45555543
No 292
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=92.61 E-value=0.08 Score=53.92 Aligned_cols=48 Identities=23% Similarity=0.138 Sum_probs=41.8
Q ss_pred ecCCCChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEEc
Q 002665 792 IPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILK 842 (895)
Q Consensus 792 ~p~g~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaMg 842 (895)
...|-.|..+++.++++.+++++++++ +||+.+ | ++|++.+|.++++.
T Consensus 150 ~~~g~~K~~~l~~~~~~~~~~~~~~~~-~gDs~~-D-~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 150 NCKGEGKVHALAELLAEEQIDLKDSYA-YGDSIS-D-LPLLSLVGHPYVVN 197 (202)
T ss_pred CCCChHHHHHHHHHHHHcCCCHHHcEe-eeCCcc-c-HHHHHhCCCcEEeC
Confidence 345678999999999999999999999 667776 7 99999999999885
No 293
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=92.59 E-value=0.2 Score=55.43 Aligned_cols=55 Identities=15% Similarity=0.138 Sum_probs=43.0
Q ss_pred ccEEEEEEecCCCChh--------------hHHHHHHHHHHHhccCCCCceEEEEEcCC---------------CHHHHH
Q 002665 609 RKYVFVIAADCDTTSD--------------FLEIIKKVVEAAGKDNSAGFIGFVLSTAL---------------TILELH 659 (895)
Q Consensus 609 ~~kli~~DiDGTL~~~--------------~~~~~~~~l~~l~~~g~~~~i~vviaTGR---------------~~~~~~ 659 (895)
++|++|+|.||||... +-+...++|+.|+++| +.++|+|.- +...+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~~G----~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~ 76 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQKAG----YKLVMVTNQDGLGTDSFPQEDFDPPHNLMM 76 (354)
T ss_pred CCcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHHhCC----CeEEEEECCccccCccccHHHHhhHHHHHH
Confidence 4789999999999432 3455889999999886 999999983 344566
Q ss_pred HHHHhCCC
Q 002665 660 SLLVSGGL 667 (895)
Q Consensus 660 ~~l~~l~l 667 (895)
.+++.+++
T Consensus 77 ~iL~~~gl 84 (354)
T PRK05446 77 QIFESQGI 84 (354)
T ss_pred HHHHHcCC
Confidence 78888887
No 294
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=92.30 E-value=4.6 Score=44.80 Aligned_cols=34 Identities=26% Similarity=0.183 Sum_probs=28.6
Q ss_pred cHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcC
Q 002665 397 DVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATK 439 (895)
Q Consensus 397 el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~ 439 (895)
+..++|+.| |+++.. .|.+.+|++.+|+|.|..-
T Consensus 228 ~~~~~m~~a----Dlal~~-----SGT~TLE~al~g~P~Vv~Y 261 (347)
T PRK14089 228 DTHKALLEA----EFAFIC-----SGTATLEAALIGTPFVLAY 261 (347)
T ss_pred cHHHHHHhh----hHHHhc-----CcHHHHHHHHhCCCEEEEE
Confidence 567899999 999876 4888889999999998854
No 295
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=92.29 E-value=0.82 Score=47.16 Aligned_cols=42 Identities=14% Similarity=0.123 Sum_probs=33.0
Q ss_pred hHHHHHHHHHHhCCCcccEEEEeCcCC-CccccccccCcceE-EEEc
Q 002665 798 RSQALRYLHVRWGIDLSNVVVIAGECG-DTDYEGLLGGVHKT-VILK 842 (895)
Q Consensus 798 Kg~al~~L~~~lgi~~~~viafgGD~n-n~D~~~Ml~~ag~g-VaMg 842 (895)
+....+.+++++|+++++++. +||+- + | +.+=+.+|.. |.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~-igDs~~~-d-i~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 152 HPKIFYAALKRLGVKPEEAVM-VGDRLDK-D-IKGAKNLGMKTVWIN 195 (221)
T ss_pred CHHHHHHHHHHcCCChhhEEE-ECCChHH-H-HHHHHHCCCEEEEEC
Confidence 456789999999999999998 77764 5 6 9988889864 4444
No 296
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=91.75 E-value=0.28 Score=54.06 Aligned_cols=53 Identities=8% Similarity=0.063 Sum_probs=41.2
Q ss_pred EEEEEecCCC--ChhhHHHHHHHHHHHhcc----CCCCceEEEEE---cCCCHHHHHHHH-HhCCCC
Q 002665 612 VFVIAADCDT--TSDFLEIIKKVVEAAGKD----NSAGFIGFVLS---TALTILELHSLL-VSGGLS 668 (895)
Q Consensus 612 li~~DiDGTL--~~~~~~~~~~~l~~l~~~----g~~~~i~vvia---TGR~~~~~~~~l-~~l~l~ 668 (895)
.++||+|||| .....+...++++.|+.. | +.+++. +|++.....+.+ +.+|++
T Consensus 2 ~~ifD~DGvL~~g~~~i~ga~eal~~L~~~~~~~g----~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 2 GFAFDIDGVLFRGKKPIAGASDALRRLNRNQGQLK----IPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred EEEEeCcCceECCccccHHHHHHHHHHhccccccC----CCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 5899999999 466788899999999986 6 444444 588888866655 888885
No 297
>PLN02940 riboflavin kinase
Probab=91.69 E-value=1.2 Score=50.40 Aligned_cols=42 Identities=12% Similarity=-0.010 Sum_probs=34.4
Q ss_pred hHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEE-EEc
Q 002665 798 RSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTV-ILK 842 (895)
Q Consensus 798 Kg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gV-aMg 842 (895)
+...+...++++|++++++++ +||+.. | ++.=+.+|..+ ++.
T Consensus 152 ~p~~~~~a~~~lgv~p~~~l~-VGDs~~-D-i~aA~~aGi~~I~v~ 194 (382)
T PLN02940 152 SPDIFLEAAKRLNVEPSNCLV-IEDSLP-G-VMAGKAAGMEVIAVP 194 (382)
T ss_pred CHHHHHHHHHHcCCChhHEEE-EeCCHH-H-HHHHHHcCCEEEEEC
Confidence 567889999999999999999 777776 8 99999999654 444
No 298
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=91.51 E-value=1.1 Score=45.43 Aligned_cols=41 Identities=12% Similarity=-0.013 Sum_probs=33.0
Q ss_pred hHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEE
Q 002665 798 RSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 798 Kg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaM 841 (895)
+....+.+++++|+++++++. +||+.. | +..=+.+|...+.
T Consensus 150 ~~~~~~~~~~~~~~~p~~~~~-vgD~~~-D-i~~A~~~G~~~i~ 190 (198)
T TIGR01428 150 APQVYQLALEALGVPPDEVLF-VASNPW-D-LGGAKKFGFKTAW 190 (198)
T ss_pred CHHHHHHHHHHhCCChhhEEE-EeCCHH-H-HHHHHHCCCcEEE
Confidence 356779999999999999988 666666 7 8888888876554
No 299
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=91.46 E-value=0.098 Score=51.94 Aligned_cols=42 Identities=21% Similarity=0.257 Sum_probs=36.0
Q ss_pred eecCCCChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCc
Q 002665 791 VIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGV 835 (895)
Q Consensus 791 I~p~g~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~a 835 (895)
..+.+.+|+.+++.+++.+|++++++++ +||+.+ | ++|++.|
T Consensus 136 ~~~~~~~K~~~l~~~~~~~~~~~~~~~~-iGDs~~-D-~~~~~~a 177 (177)
T TIGR01488 136 VNPEGECKGKVLKELLEESKITLKKIIA-VGDSVN-D-LPMLKLA 177 (177)
T ss_pred ccCCcchHHHHHHHHHHHhCCCHHHEEE-EeCCHH-H-HHHHhcC
Confidence 3567889999999999999999999988 677777 7 9999764
No 300
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=91.36 E-value=0.52 Score=49.57 Aligned_cols=54 Identities=13% Similarity=0.021 Sum_probs=41.2
Q ss_pred cEEEEEEecCCCC---------------------h---------hhHHHHHHHHHHHhccCCCCceEEEEEcCCCH---H
Q 002665 610 KYVFVIAADCDTT---------------------S---------DFLEIIKKVVEAAGKDNSAGFIGFVLSTALTI---L 656 (895)
Q Consensus 610 ~kli~~DiDGTL~---------------------~---------~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~---~ 656 (895)
+-+++||||+|+. . ...+.+.++.+.++++| +.|++.|||+- .
T Consensus 101 ~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G----~kIf~VSgR~e~~r~ 176 (275)
T TIGR01680 101 KDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSLG----FKIIFLSGRLKDKQA 176 (275)
T ss_pred CCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHCC----CEEEEEeCCchhHHH
Confidence 5689999999982 0 12456778888888887 99999999974 3
Q ss_pred HHHHHHHhCCC
Q 002665 657 ELHSLLVSGGL 667 (895)
Q Consensus 657 ~~~~~l~~l~l 667 (895)
...++|...|+
T Consensus 177 aT~~NL~kaGy 187 (275)
T TIGR01680 177 VTEANLKKAGY 187 (275)
T ss_pred HHHHHHHHcCC
Confidence 34567888888
No 301
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=91.35 E-value=0.32 Score=50.37 Aligned_cols=38 Identities=13% Similarity=0.102 Sum_probs=28.9
Q ss_pred CChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEE
Q 002665 796 ASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVI 840 (895)
Q Consensus 796 ~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVa 840 (895)
..|..+++ +++...+++++ +||+.+ | +.|.+.||..+|
T Consensus 147 ~~K~~~l~----~~~~~~~~~i~-iGDs~~-D-i~aa~~Ag~~~a 184 (219)
T PRK09552 147 CCKPSLIR----KLSDTNDFHIV-IGDSIT-D-LEAAKQADKVFA 184 (219)
T ss_pred CchHHHHH----HhccCCCCEEE-EeCCHH-H-HHHHHHCCccee
Confidence 34776554 45777888888 788777 8 999999998666
No 302
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=91.31 E-value=28 Score=38.79 Aligned_cols=105 Identities=12% Similarity=0.084 Sum_probs=59.7
Q ss_pred CCcEEEEEeCCCCCCCHH--HHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCC
Q 002665 315 RKPMILALARPDPKKNIT--TLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKH 392 (895)
Q Consensus 315 ~~~~Il~vgrl~~~Kgi~--~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~ 392 (895)
+..+++..|.-...|... ...+....+.+ ....+ +++|+..+.+. +...+| .+.....+.+.+.|.
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~--~~~~v-vl~ggp~e~e~------~~~~~i---~~~~~~~~~~~l~g~ 250 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQA--RGYEV-VLTSGPDKDDL------ACVNEI---AQGCQTPPVTALAGK 250 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHH--CCCeE-EEEcCCChHHH------HHHHHH---HHhcCCCccccccCC
Confidence 345566777655566543 55555555532 23344 34443221110 111222 222222234667888
Q ss_pred CCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCC
Q 002665 393 HKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN 440 (895)
Q Consensus 393 ~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~ 440 (895)
.+-.++.++++.| |++|-. |. ..+-=|.|.|+|+|+=..
T Consensus 251 ~sL~el~ali~~a----~l~v~n---DS--Gp~HlAaA~g~P~v~lfG 289 (352)
T PRK10422 251 TTFPELGALIDHA----QLFIGV---DS--APAHIAAAVNTPLICLFG 289 (352)
T ss_pred CCHHHHHHHHHhC----CEEEec---CC--HHHHHHHHcCCCEEEEEC
Confidence 8889999999999 999853 33 334446788999998654
No 303
>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E.coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.
Probab=90.90 E-value=8.3 Score=40.34 Aligned_cols=145 Identities=14% Similarity=0.092 Sum_probs=79.6
Q ss_pred CCcEE---EEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCC-CchhhhhhhHHHHHHHHHH-----------HH
Q 002665 315 RKPMI---LALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRD-DIDEMSGTNAALLLSILKL-----------ID 379 (895)
Q Consensus 315 ~~~~I---l~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~-~~~~l~~~~~~~~~~i~~~-----------~~ 379 (895)
.++.. +|+||..-.||+..+++.-+..+ .+ +++.-++-+.+ .... -.+... ++
T Consensus 179 se~nmnv~~yigR~Tt~kG~~~mfD~h~~~l--K~-~~~~t~~~GierS~A~---------~~i~d~~~~~~y~~~~~~~ 246 (355)
T PF11440_consen 179 SEKNMNVNRYIGRQTTWKGPRRMFDLHEKIL--KP-AGFKTIMEGIERSPAK---------ISIKDHGIPYEYYPKLDCD 246 (355)
T ss_dssp GGSEEEEEEEE--SSGGG-HHHHHHHHHHTT--TT-TT-EEEEE---SSTHH---------HHHHHTT--EEEE-CTGGG
T ss_pred HhhhcccceeeeeeeeecCcHHHhhhHHHhc--CC-cchhHHhhhhhcCCce---------eeeecCCcccccCcccccc
Confidence 34555 89999999999999999998874 33 66665553322 1111 111111 11
Q ss_pred HcCCCC--CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCC------CCCCChHHHHHHHcCC-CEEEcCCCCcc------
Q 002665 380 KYDLYG--QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAF------IEPFGLTLIEAAAYGL-PIVATKNGGPV------ 444 (895)
Q Consensus 380 ~~~l~~--~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~------~eg~gl~~~Ea~a~G~-PVvat~~gg~~------ 444 (895)
+..+.+ -+..+|..=.+|....++.+ ...+.-+. .+.|-.+-+|..|||. ||.-...|-.-
T Consensus 247 ~~~~~pN~~~~v~~~Yi~~E~~~~Maks----~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~ 322 (355)
T PF11440_consen 247 EPKPAPNSPVPVYGPYIRSEGLERMAKS----LFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDG 322 (355)
T ss_dssp G---SSS--EEEESS--HHHHHHHHHTE----EEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTS
T ss_pred CcccCCCCcceecchhhhHHHHHHHhhc----cceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecC
Confidence 222222 35667766677888888888 55443331 3458889999999996 66665554322
Q ss_pred -cccccCCceEEeCCCCHHHHHHHHHHHhhCH
Q 002665 445 -DIHRVLDNGLLVDPHDQQSIADALLKLVSDK 475 (895)
Q Consensus 445 -eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~ 475 (895)
-++.....++.++-.|.++-.+.|.++.+++
T Consensus 323 ~~~~~~~~~~I~~De~dle~T~ekl~E~a~~~ 354 (355)
T PF11440_consen 323 TRYIDHPYSAIYFDENDLESTVEKLIEVANNR 354 (355)
T ss_dssp SBGGSS--S-EEE-TTSHHHHHHHHHHHHT-H
T ss_pred ceeeccCcceeEeccchHHHHHHHHHHHhccC
Confidence 2333344688999999999999988876553
No 304
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=90.84 E-value=0.28 Score=48.19 Aligned_cols=54 Identities=9% Similarity=0.075 Sum_probs=36.5
Q ss_pred cEEEEEEecCCC------Ch----------------------hhHHHHHHHHHHHhccCCCCceEEEEEcCC-CHHHHHH
Q 002665 610 KYVFVIAADCDT------TS----------------------DFLEIIKKVVEAAGKDNSAGFIGFVLSTAL-TILELHS 660 (895)
Q Consensus 610 ~kli~~DiDGTL------~~----------------------~~~~~~~~~l~~l~~~g~~~~i~vviaTGR-~~~~~~~ 660 (895)
.|||+||+|+|| +. ..-+...++|++|+++| +.+++||== .+.-+++
T Consensus 3 PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~g----v~lavASRt~~P~~A~~ 78 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKERG----VKLAVASRTDEPDWARE 78 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHCT------EEEEE--S-HHHHHH
T ss_pred CcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHCC----CEEEEEECCCChHHHHH
Confidence 479999999999 11 13456788899999986 999999843 4567889
Q ss_pred HHHhCCC
Q 002665 661 LLVSGGL 667 (895)
Q Consensus 661 ~l~~l~l 667 (895)
.|+.+++
T Consensus 79 ~L~~l~i 85 (169)
T PF12689_consen 79 LLKLLEI 85 (169)
T ss_dssp HHHHTT-
T ss_pred HHHhcCC
Confidence 9999887
No 305
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=90.67 E-value=0.17 Score=49.36 Aligned_cols=53 Identities=15% Similarity=0.123 Sum_probs=36.2
Q ss_pred EEEEEEecCCC--C-------------hhhHHHHHHHHHHHhccCCCCceEEEEEc-----CC--CH-------HHHHHH
Q 002665 611 YVFVIAADCDT--T-------------SDFLEIIKKVVEAAGKDNSAGFIGFVLST-----AL--TI-------LELHSL 661 (895)
Q Consensus 611 kli~~DiDGTL--~-------------~~~~~~~~~~l~~l~~~g~~~~i~vviaT-----GR--~~-------~~~~~~ 661 (895)
|+.+||+|||| + .-..+...++|++|.++| ..+||.| |+ .. .-+..+
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~~G----y~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~i 76 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHKKG----YKIVIVTNQSGIGRGMGEKDLENFHEKIENI 76 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHHTT----EEEEEEEE-CCCCCTBTCCHHHHHHHHHHHH
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHhcC----CeEEEEeCccccccccccchHHHHHHHHHHH
Confidence 68999999999 1 013446888899998886 8999987 55 11 234456
Q ss_pred HHhCCC
Q 002665 662 LVSGGL 667 (895)
Q Consensus 662 l~~l~l 667 (895)
++.+++
T Consensus 77 l~~l~i 82 (159)
T PF08645_consen 77 LKELGI 82 (159)
T ss_dssp HHHCTS
T ss_pred HHHcCC
Confidence 777777
No 306
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=90.38 E-value=1.1 Score=47.53 Aligned_cols=43 Identities=14% Similarity=-0.078 Sum_probs=32.9
Q ss_pred hHHHHHHHHHHhCCC-cccEEEEeCcCCCccccccccCcceE-EEEcC
Q 002665 798 RSQALRYLHVRWGID-LSNVVVIAGECGDTDYEGLLGGVHKT-VILKG 843 (895)
Q Consensus 798 Kg~al~~L~~~lgi~-~~~viafgGD~nn~D~~~Ml~~ag~g-VaMgN 843 (895)
+-..+...++++|+. ++++++ +||+.+ | +.+=+.+|.. |++..
T Consensus 158 ~p~~~~~a~~~l~~~~~~~~l~-IGDs~~-D-i~aA~~aGi~~i~v~~ 202 (253)
T TIGR01422 158 APWMALKNAIELGVYDVAACVK-VGDTVP-D-IEEGRNAGMWTVGLIL 202 (253)
T ss_pred CHHHHHHHHHHcCCCCchheEE-ECCcHH-H-HHHHHHCCCeEEEEec
Confidence 456778889999995 899998 777777 8 8888888854 44433
No 307
>PTZ00445 p36-lilke protein; Provisional
Probab=90.31 E-value=0.39 Score=48.27 Aligned_cols=50 Identities=8% Similarity=0.080 Sum_probs=37.0
Q ss_pred eecCCCChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcce-EEEEcC
Q 002665 791 VIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHK-TVILKG 843 (895)
Q Consensus 791 I~p~g~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~-gVaMgN 843 (895)
+.|.-..|-.=++++++++|+++++++. +||... . ++--+..|. ++-..+
T Consensus 156 ~KPdp~iK~yHle~ll~~~gl~peE~LF-IDD~~~-N-VeaA~~lGi~ai~f~~ 206 (219)
T PTZ00445 156 DAPMPLDKSYHLKQVCSDFNVNPDEILF-IDDDMN-N-CKNALKEGYIALHVTG 206 (219)
T ss_pred cCCCccchHHHHHHHHHHcCCCHHHeEe-ecCCHH-H-HHHHHHCCCEEEEcCC
Confidence 3455567888889999999999999977 888654 4 787777774 444443
No 308
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=90.17 E-value=0.31 Score=49.78 Aligned_cols=53 Identities=13% Similarity=0.228 Sum_probs=38.9
Q ss_pred CCCChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEEcCchhhhHhhhhcCC
Q 002665 794 VLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHANRN 856 (895)
Q Consensus 794 ~g~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaMgNA~~~~~~~~~~~~ 856 (895)
..-.|...++.+. ..|. ++++ +||+.| | ++|++.||.+|||. ..+.+...+++
T Consensus 129 ~~~~K~~~l~~l~-~~~~---~~v~-vGDs~n-D-l~ml~~Ag~~ia~~---ak~~~~~~~~~ 181 (203)
T TIGR02137 129 QKDPKRQSVIAFK-SLYY---RVIA-AGDSYN-D-TTMLSEAHAGILFH---APENVIREFPQ 181 (203)
T ss_pred CcchHHHHHHHHH-hhCC---CEEE-EeCCHH-H-HHHHHhCCCCEEec---CCHHHHHhCCC
Confidence 3457999999884 5564 5877 777777 8 99999999999996 22445555543
No 309
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=90.10 E-value=1 Score=50.43 Aligned_cols=55 Identities=9% Similarity=0.135 Sum_probs=46.2
Q ss_pred cccEEEEEEecCCCC-------------------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCC
Q 002665 608 RRKYVFVIAADCDTT-------------------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGG 666 (895)
Q Consensus 608 ~~~kli~~DiDGTL~-------------------~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~ 666 (895)
..+|.+++|+|+||- ...-..+.+.+..|+++| +.++|||=.....+++.+..-+
T Consensus 220 ~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~kqG----VlLav~SKN~~~da~evF~khp 293 (574)
T COG3882 220 KSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKKQG----VLLAVCSKNTEKDAKEVFRKHP 293 (574)
T ss_pred cccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHhcc----EEEEEecCCchhhHHHHHhhCC
Confidence 789999999999991 234566788888899987 9999999999999999887643
No 310
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=90.03 E-value=0.42 Score=48.69 Aligned_cols=38 Identities=13% Similarity=0.039 Sum_probs=29.4
Q ss_pred HHHHHHHHHHhCCCcccEEEEeCcCC-CccccccccCcceEE
Q 002665 799 SQALRYLHVRWGIDLSNVVVIAGECG-DTDYEGLLGGVHKTV 839 (895)
Q Consensus 799 g~al~~L~~~lgi~~~~viafgGD~n-n~D~~~Ml~~ag~gV 839 (895)
....+++++++|+++++++. +||+. + | +..=+.+|...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~-IgD~~~~-D-i~~A~~aG~~~ 201 (203)
T TIGR02252 163 PKIFQEALERAGISPEEALH-IGDSLRN-D-YQGARAAGWRA 201 (203)
T ss_pred HHHHHHHHHHcCCChhHEEE-ECCCchH-H-HHHHHHcCCee
Confidence 35678999999999999998 77774 5 6 77777777543
No 311
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=90.02 E-value=0.26 Score=51.23 Aligned_cols=56 Identities=11% Similarity=0.026 Sum_probs=42.4
Q ss_pred cccEEEEEEecCCCC-----------------------------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHH--
Q 002665 608 RRKYVFVIAADCDTT-----------------------------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTIL-- 656 (895)
Q Consensus 608 ~~~kli~~DiDGTL~-----------------------------~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~-- 656 (895)
..+..|+||||+|+. ....+...++++.++++| +.|++.|||+-.
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~G----~~V~~iT~R~~~~r 145 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSRG----VKVFFITGRPESQR 145 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHTT----EEEEEEEEEETTCH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHCC----CeEEEEecCCchhH
Confidence 357789999999981 112334778899999987 999999999644
Q ss_pred -HHHHHHHhCCC
Q 002665 657 -ELHSLLVSGGL 667 (895)
Q Consensus 657 -~~~~~l~~l~l 667 (895)
.....|...|+
T Consensus 146 ~~T~~nL~~~G~ 157 (229)
T PF03767_consen 146 EATEKNLKKAGF 157 (229)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHcCC
Confidence 55567777787
No 312
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=89.69 E-value=1 Score=47.19 Aligned_cols=67 Identities=15% Similarity=0.067 Sum_probs=48.9
Q ss_pred cccEEEEEEecCCCC-h-----hhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCC
Q 002665 608 RRKYVFVIAADCDTT-S-----DFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNS 679 (895)
Q Consensus 608 ~~~kli~~DiDGTL~-~-----~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~n 679 (895)
....+|+||+|-||- . -..+...+.+.+|++.| .+.+.-++|- ..-+..-++++++. .-+|.+||.+
T Consensus 120 ~~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~Lk~~g---~vLvLWSyG~-~eHV~~sl~~~~L~-~~Fd~ii~~G 192 (297)
T PF05152_consen 120 EPPHVIVFDLDSTLITDEGDVRIRDPAVYDSLRELKEQG---CVLVLWSYGN-REHVRHSLKELKLE-GYFDIIICGG 192 (297)
T ss_pred CCCcEEEEECCCcccccCCccccCChHHHHHHHHHHHcC---CEEEEecCCC-HHHHHHHHHHhCCc-cccEEEEeCC
Confidence 466799999999992 1 24577889999999986 4556666665 45667788888875 3467777754
No 313
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=89.55 E-value=0.6 Score=46.64 Aligned_cols=40 Identities=10% Similarity=0.057 Sum_probs=30.6
Q ss_pred cCCCChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceE
Q 002665 793 PVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKT 838 (895)
Q Consensus 793 p~g~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~g 838 (895)
+.|..|+..++.+.+.+ ++++++ +||+.+ | ++|.+.++.-
T Consensus 145 ~~g~~K~~~~~~~~~~~---~~~~i~-iGD~~~-D-~~aa~~~d~~ 184 (188)
T TIGR01489 145 PCGCCKGKVIHKLSEPK---YQHIIY-IGDGVT-D-VCPAKLSDVV 184 (188)
T ss_pred CCCCCHHHHHHHHHhhc---CceEEE-ECCCcc-h-hchHhcCCcc
Confidence 46678999999888765 567776 788877 8 9998887544
No 314
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=88.86 E-value=2.8 Score=44.68 Aligned_cols=38 Identities=18% Similarity=0.287 Sum_probs=31.0
Q ss_pred CCChHHHHH-HHHHHhC--CCcccEEEEeCcCCCccccccccCc
Q 002665 795 LASRSQALR-YLHVRWG--IDLSNVVVIAGECGDTDYEGLLGGV 835 (895)
Q Consensus 795 g~sKg~al~-~L~~~lg--i~~~~viafgGD~nn~D~~~Ml~~a 835 (895)
..+|...+. ..+++++ ++++++|+ +||+-+ | +.|..++
T Consensus 190 ~~~K~~~v~~~~~~~~~~~~~~~~vI~-vGDs~~-D-l~ma~g~ 230 (277)
T TIGR01544 190 TFNKNHDVALRNTEYFNQLKDRSNIIL-LGDSQG-D-LRMADGV 230 (277)
T ss_pred ccccHHHHHHHHHHHhCccCCcceEEE-ECcChh-h-hhHhcCC
Confidence 467887775 6899999 99999999 777776 7 9998776
No 315
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=88.73 E-value=3.1 Score=42.53 Aligned_cols=42 Identities=12% Similarity=0.193 Sum_probs=33.0
Q ss_pred HHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceE-EEEcC
Q 002665 799 SQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKT-VILKG 843 (895)
Q Consensus 799 g~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~g-VaMgN 843 (895)
......+++++|+++++++. +||... | +.+=+.+|.. |.+.+
T Consensus 155 p~~~~~~~~~~g~~~~~~l~-i~D~~~-d-i~aA~~aG~~~i~v~~ 197 (211)
T TIGR02247 155 PRIYQLMLERLGVAPEECVF-LDDLGS-N-LKPAAALGITTIKVSD 197 (211)
T ss_pred HHHHHHHHHHcCCCHHHeEE-EcCCHH-H-HHHHHHcCCEEEEECC
Confidence 45778899999999999999 588776 7 8888888864 44443
No 316
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=88.70 E-value=0.35 Score=45.79 Aligned_cols=28 Identities=39% Similarity=0.334 Sum_probs=25.0
Q ss_pred CCchhhHHHHHHHHHhcCCCcceEEEeecc
Q 002665 31 TGGQVKYVVELARALGSMPGVYRVDLLTRQ 60 (895)
Q Consensus 31 ~GG~~~~v~~La~~L~~~g~~~~V~vit~~ 60 (895)
|+|...-.+-|+++|.++| |+|.+.|..
T Consensus 8 t~Ghv~P~lala~~L~~rG--h~V~~~~~~ 35 (139)
T PF03033_consen 8 TRGHVYPFLALARALRRRG--HEVRLATPP 35 (139)
T ss_dssp SHHHHHHHHHHHHHHHHTT---EEEEEETG
T ss_pred ChhHHHHHHHHHHHHhccC--CeEEEeecc
Confidence 7899999999999999999 999988875
No 317
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=88.35 E-value=1.1 Score=43.98 Aligned_cols=59 Identities=10% Similarity=0.033 Sum_probs=45.5
Q ss_pred cccEEEEEEecCCCC----hhhHHHHHHHHHHHhccCCCCceEEEEEcCC-------CHHHHHHHHHhCCCC
Q 002665 608 RRKYVFVIAADCDTT----SDFLEIIKKVVEAAGKDNSAGFIGFVLSTAL-------TILELHSLLVSGGLS 668 (895)
Q Consensus 608 ~~~kli~~DiDGTL~----~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR-------~~~~~~~~l~~l~l~ 668 (895)
...|.|+||.|.||+ ..+++...+.++++++.+ +.-.|+|.|=- ....+..+-+.+|++
T Consensus 39 ~Gik~li~DkDNTL~~~~~~~i~~~~~~~~~~l~~~~--~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp 108 (168)
T PF09419_consen 39 KGIKALIFDKDNTLTPPYEDEIPPEYAEWLNELKKQF--GKDRVLIVSNSAGSSDDPDGERAEALEKALGIP 108 (168)
T ss_pred cCceEEEEcCCCCCCCCCcCcCCHHHHHHHHHHHHHC--CCCeEEEEECCCCcccCccHHHHHHHHHhhCCc
Confidence 678999999999994 678889999999999986 32245565544 366777777888883
No 318
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=88.34 E-value=0.52 Score=48.83 Aligned_cols=35 Identities=14% Similarity=0.205 Sum_probs=27.4
Q ss_pred HHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 629 IKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 629 ~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
..++++.|+++| +.++++|+.+...+...++.+++
T Consensus 91 v~~~l~~L~~~~----i~~avaS~s~~~~~~~~L~~~gl 125 (221)
T COG0637 91 VVELLEQLKARG----IPLAVASSSPRRAAERVLARLGL 125 (221)
T ss_pred HHHHHHHHHhcC----CcEEEecCChHHHHHHHHHHccC
Confidence 455667777775 88888888888888888888876
No 319
>PLN02207 UDP-glycosyltransferase
Probab=88.14 E-value=8.1 Score=44.78 Aligned_cols=133 Identities=12% Similarity=0.141 Sum_probs=74.4
Q ss_pred CCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCC--chhhhhhhHHHHHHHHHHHHHcCCCCCEEeC
Q 002665 315 RKPMILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDD--IDEMSGTNAALLLSILKLIDKYDLYGQVAYP 390 (895)
Q Consensus 315 ~~~~Il~vgrl~--~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~--~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~ 390 (895)
+..+.++.|... ..+-+..++.+++.+. . .+..++.+... .+.+. . +..++. .++..+.
T Consensus 275 ~sVVyvSfGS~~~~~~~q~~ela~~l~~~~----~-~flW~~r~~~~~~~~~lp-------~---~f~er~--~~~g~i~ 337 (468)
T PLN02207 275 ASVVFLCFGSMGRLRGPLVKEIAHGLELCQ----Y-RFLWSLRTEEVTNDDLLP-------E---GFLDRV--SGRGMIC 337 (468)
T ss_pred CcEEEEEeccCcCCCHHHHHHHHHHHHHCC----C-cEEEEEeCCCccccccCC-------H---HHHhhc--CCCeEEE
Confidence 345667777654 2234666666776652 2 45445553211 00111 0 111222 2455666
Q ss_pred CCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcc----c-ccccCCceEEeC--------
Q 002665 391 KHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV----D-IHRVLDNGLLVD-------- 457 (895)
Q Consensus 391 g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~----e-iv~~~~~g~lv~-------- 457 (895)
++.|+.++-+- ... ++|| ..+--.+.+||+.+|+|+|+-...+=+ . ++..-+.|+-+.
T Consensus 338 ~W~PQ~~IL~H-~~v----g~Fv----TH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~ 408 (468)
T PLN02207 338 GWSPQVEILAH-KAV----GGFV----SHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSD 408 (468)
T ss_pred EeCCHHHHhcc-ccc----ceee----ecCccccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccC
Confidence 89888875443 222 5566 233345779999999999998764422 2 222234565331
Q ss_pred -CCCHHHHHHHHHHHhh
Q 002665 458 -PHDQQSIADALLKLVS 473 (895)
Q Consensus 458 -p~d~~~la~ai~~ll~ 473 (895)
.-+.+++.++|++++.
T Consensus 409 ~~v~~e~i~~av~~vm~ 425 (468)
T PLN02207 409 EIVNANEIETAIRCVMN 425 (468)
T ss_pred CcccHHHHHHHHHHHHh
Confidence 2277899999999996
No 320
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=87.93 E-value=1.5 Score=56.41 Aligned_cols=41 Identities=15% Similarity=0.063 Sum_probs=37.7
Q ss_pred hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 623 SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 623 ~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
+.+.+.+.++++.|+++| +++.+.||=....+..+..+.++
T Consensus 630 D~lq~~v~etI~~L~~AG----Ikv~mlTGD~~~TA~~IA~~~~i 670 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQAG----IKIWVLTGDKVETAINIGYSCRL 670 (1057)
T ss_pred hhhhhccHHHHHHHHHCC----CeEEEEcCCcHHHHHHHHHHhCC
Confidence 567778999999999997 99999999999999999999987
No 321
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=87.66 E-value=0.75 Score=46.93 Aligned_cols=36 Identities=14% Similarity=0.024 Sum_probs=28.4
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 627 EIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 627 ~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
+...++++.+++. ..++|+||-....+.++++++|+
T Consensus 71 pga~ell~~lk~~-----~~~~IVS~~~~~~~~~il~~lgi 106 (203)
T TIGR02137 71 EGAVEFVDWLRER-----FQVVILSDTFYEFSQPLMRQLGF 106 (203)
T ss_pred ccHHHHHHHHHhC-----CeEEEEeCChHHHHHHHHHHcCC
Confidence 3445667777764 37899999999999999999998
No 322
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=86.01 E-value=1 Score=43.85 Aligned_cols=52 Identities=13% Similarity=0.056 Sum_probs=38.3
Q ss_pred EEEEEEecCCCC----hh------------------hHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 611 YVFVIAADCDTT----SD------------------FLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 611 kli~~DiDGTL~----~~------------------~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
|+|++|+||||. .. .-+.+.+.|+.+.+. ..++|.|..+..-+..+++.+.-
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~~-----~ev~i~T~~~~~ya~~v~~~ldp 74 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSKH-----YEVVIWTSASEEYAEPVLDALDP 74 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHHH-----CEEEEE-SS-HHHHHHHHHHHTT
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHHh-----ceEEEEEeehhhhhhHHHHhhhh
Confidence 689999999992 11 456788888888665 78999999999999999888753
No 323
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=85.22 E-value=1.3 Score=51.18 Aligned_cols=71 Identities=13% Similarity=0.091 Sum_probs=49.7
Q ss_pred ccccEEEEEEecCCCChh--------------hHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHH---HHHHHhCCCCC
Q 002665 607 RRRKYVFVIAADCDTTSD--------------FLEIIKKVVEAAGKDNSAGFIGFVLSTALTILEL---HSLLVSGGLSP 669 (895)
Q Consensus 607 ~~~~kli~~DiDGTL~~~--------------~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~---~~~l~~l~l~~ 669 (895)
+-..|+|+.|||||.|+. .+....++..+++++| .+++++|.|+...+ +.+|+.+.-
T Consensus 527 kWn~kIVISDIDGTITKSDvLGh~lp~iGkDWTh~GVAkLyt~Ik~NG----Yk~lyLSARaIgQA~~TR~yL~nv~Q-- 600 (738)
T KOG2116|consen 527 KWNDKIVISDIDGTITKSDVLGHVLPMIGKDWTHTGVAKLYTKIKENG----YKILYLSARAIGQADSTRQYLKNVEQ-- 600 (738)
T ss_pred ecCCcEEEecCCCceEhhhhhhhhhhhhcCcchhhhHHHHHHHHHhCC----eeEEEEehhhhhhhHHHHHHHHHHhh--
Confidence 347899999999999522 4567788889999997 99999999987654 455554432
Q ss_pred CCCCEEEeCCCceEecC
Q 002665 670 LAFDAFICNSGSELYYP 686 (895)
Q Consensus 670 ~~~d~~I~~nGa~I~~~ 686 (895)
|+.+.-.|=.|..+
T Consensus 601 ---dG~~LPdGPViLSP 614 (738)
T KOG2116|consen 601 ---DGKKLPDGPVILSP 614 (738)
T ss_pred ---cCccCCCCCEEeCC
Confidence 33444445555443
No 324
>PLN03190 aminophospholipid translocase; Provisional
Probab=84.97 E-value=5.1 Score=51.80 Aligned_cols=41 Identities=15% Similarity=0.037 Sum_probs=37.9
Q ss_pred hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 623 SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 623 ~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
+.+.+...++++.|+++| +++.+.||-....+..+....++
T Consensus 725 D~lr~~v~~~I~~l~~ag----i~v~mlTGD~~~tAi~IA~s~~L 765 (1178)
T PLN03190 725 DKLQQGVPEAIESLRTAG----IKVWVLTGDKQETAISIGYSSKL 765 (1178)
T ss_pred cCCchhHHHHHHHHHHCC----CEEEEECCCCHHHHHHHHHHhCC
Confidence 678888999999999997 99999999999999999999887
No 325
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=84.39 E-value=70 Score=35.21 Aligned_cols=106 Identities=18% Similarity=0.302 Sum_probs=81.3
Q ss_pred HHHHHcCC--CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccCCce
Q 002665 376 KLIDKYDL--YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNG 453 (895)
Q Consensus 376 ~~~~~~~l--~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g 453 (895)
..+..+++ .++..|.|.+ +++.++..-+ |++|.--+--+.|..-+|++--|=|.|-.. .++. +.|
T Consensus 242 ~f~~~ldlvr~gkasfegR~---~~p~fla~~t---D~VvSHqWeN~lNYlY~daLyggYPLVHNS-----~~l~--d~G 308 (364)
T PF10933_consen 242 NFANSLDLVRDGKASFEGRF---DFPDFLAQHT---DAVVSHQWENPLNYLYYDALYGGYPLVHNS-----PLLK--DVG 308 (364)
T ss_pred HHHHhhHHhhcCeeEEeeec---ChHHHHHhCC---CEEEeccccchhhHHHHHHHhcCCCcccCc-----chhc--ccC
Confidence 34445554 3567777774 6777777765 998887778889999999999999999743 2333 269
Q ss_pred EEeCCCCHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHhhCCH
Q 002665 454 LLVDPHDQQSIADALLKLVS-DKQLWERCRQNGLKNIHQFSW 494 (895)
Q Consensus 454 ~lv~p~d~~~la~ai~~ll~-~~~~~~~~~~~~~~~v~~~s~ 494 (895)
+..+-.|..+=+++|.+++. ....++...+.+++.+.+++.
T Consensus 309 YYY~~fD~~~G~r~L~~A~~~HD~~~~~Y~~ra~~~l~~~~p 350 (364)
T PF10933_consen 309 YYYPDFDAFEGARQLLRAIREHDADLDAYRARARRLLDRLSP 350 (364)
T ss_pred cCCCCccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhhCC
Confidence 99999999999999999998 666788888888888865543
No 326
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=84.20 E-value=1.6 Score=43.19 Aligned_cols=39 Identities=10% Similarity=0.158 Sum_probs=30.8
Q ss_pred cEEEEEEecCCCC--h----------hhHHHHHHHHHHHhccCCCCceEEEEEcC
Q 002665 610 KYVFVIAADCDTT--S----------DFLEIIKKVVEAAGKDNSAGFIGFVLSTA 652 (895)
Q Consensus 610 ~kli~~DiDGTL~--~----------~~~~~~~~~l~~l~~~g~~~~i~vviaTG 652 (895)
.++||+|-||||. + ...+.+.+++..+++.| ..+|++|=
T Consensus 5 ~k~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l~~~g----y~lVvvTN 55 (181)
T COG0241 5 QKALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPALLKLQRAG----YKLVVVTN 55 (181)
T ss_pred CcEEEEcCCCceecCCCcccCcHHHhccCccHHHHHHHHHhCC----CeEEEEEC
Confidence 6899999999992 1 23456788889998886 88888873
No 327
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=83.27 E-value=2.1 Score=43.08 Aligned_cols=59 Identities=15% Similarity=0.186 Sum_probs=45.5
Q ss_pred cccccccEEEEEEecCCCChh----------hHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 604 PALRRRKYVFVIAADCDTTSD----------FLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 604 ~~~~~~~kli~~DiDGTL~~~----------~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
+..+..+|++++|+|+||.+. .-+.+.+.|+.+.+. ..++|=|-.+..-+...+.++++
T Consensus 15 ~~~~~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~~-----feIvVwTAa~~~ya~~~l~~l~~ 83 (195)
T TIGR02245 15 NPPREGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYED-----YDIVIWSATSMKWIEIKMTELGV 83 (195)
T ss_pred CCCCCCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHhC-----CEEEEEecCCHHHHHHHHHHhcc
Confidence 334567899999999999422 245678888888776 67888888888888889998875
No 328
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=82.74 E-value=12 Score=43.38 Aligned_cols=179 Identities=12% Similarity=0.124 Sum_probs=122.2
Q ss_pred ccCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEE----EecCCCchhhhhhhHHHHHHHHHHHHHcCCCC
Q 002665 310 FFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLI----MGNRDDIDEMSGTNAALLLSILKLIDKYDLYG 385 (895)
Q Consensus 310 ~~~~~~~~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~li----vG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~ 385 (895)
+..+.+..++..+..+ .|=-...++.+...++.-|...+.|. +|. .++...+.++|+.+
T Consensus 753 y~Lp~d~vvf~~FNqL--yKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge---------------~rf~ty~~~~Gl~p 815 (966)
T KOG4626|consen 753 YGLPEDAVVFCNFNQL--YKIDPSTLQMWANILKRVPNSVLWLLRFPAVGE---------------QRFRTYAEQLGLEP 815 (966)
T ss_pred CCCCCCeEEEeechhh--hcCCHHHHHHHHHHHHhCCcceeEEEeccccch---------------HHHHHHHHHhCCCc
Confidence 3445555556666555 45456778888877654444333321 232 46778888999986
Q ss_pred -CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCc-----ccccccCCceEEeCCC
Q 002665 386 -QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGP-----VDIHRVLDNGLLVDPH 459 (895)
Q Consensus 386 -~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~-----~eiv~~~~~g~lv~p~ 459 (895)
+|.|..-...+|=..-+..| ||++-|++.-| -.+-.|.+-+|+|+|.-...-. ..++..-+.|-++ ..
T Consensus 816 ~riifs~va~k~eHvrr~~La----Dv~LDTplcnG-hTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hli-ak 889 (966)
T KOG4626|consen 816 DRIIFSPVAAKEEHVRRGQLA----DVCLDTPLCNG-HTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLI-AK 889 (966)
T ss_pred cceeeccccchHHHHHhhhhh----hhcccCcCcCC-cccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHH-hh
Confidence 78888877788888889999 99998877544 2456788999999987543111 1222222344444 35
Q ss_pred CHHHHHHHHHHHhhCHHHHHHHHHHHHHHH-h--hCCHHHHHHHHHHHHHHhhhc
Q 002665 460 DQQSIADALLKLVSDKQLWERCRQNGLKNI-H--QFSWPEHCKSYLSRISSCKQR 511 (895)
Q Consensus 460 d~~~la~ai~~ll~~~~~~~~~~~~~~~~v-~--~~s~~~~a~~~~~~l~~~~~~ 511 (895)
+.++..+.-.++-+|.+..+.++..-+... . -|+-.+|+..+.+.|.++-.+
T Consensus 890 ~~eEY~~iaV~Latd~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~MW~~ 944 (966)
T KOG4626|consen 890 NREEYVQIAVRLATDKEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQMWKK 944 (966)
T ss_pred hHHHHHHHHHHhhcCHHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHHHHHH
Confidence 888888888888888888877777766654 2 699999999999998877554
No 329
>COG4996 Predicted phosphatase [General function prediction only]
Probab=82.64 E-value=2.6 Score=38.64 Aligned_cols=53 Identities=15% Similarity=0.000 Sum_probs=43.1
Q ss_pred EEEEEEecCCC-C--------------------------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHH
Q 002665 611 YVFVIAADCDT-T--------------------------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLV 663 (895)
Q Consensus 611 kli~~DiDGTL-~--------------------------~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~ 663 (895)
++|+||.|||| + -..-+..++.++++++.| ..+..+|=.-..-+.+.+.
T Consensus 1 ~~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG----~i~~~~sWN~~~kA~~aLr 76 (164)
T COG4996 1 RAIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSG----YILGLASWNFEDKAIKALR 76 (164)
T ss_pred CcEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCC----cEEEEeecCchHHHHHHHH
Confidence 47999999999 1 013466788999999987 8899999998888888888
Q ss_pred hCCC
Q 002665 664 SGGL 667 (895)
Q Consensus 664 ~l~l 667 (895)
.+++
T Consensus 77 al~~ 80 (164)
T COG4996 77 ALDL 80 (164)
T ss_pred Hhch
Confidence 8887
No 330
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=80.75 E-value=3.3 Score=40.24 Aligned_cols=56 Identities=14% Similarity=0.060 Sum_probs=37.9
Q ss_pred ccccEEEEEEecCCCChh-----h---------------------------------HHHHHHHHHHHhccCCCCceEEE
Q 002665 607 RRRKYVFVIAADCDTTSD-----F---------------------------------LEIIKKVVEAAGKDNSAGFIGFV 648 (895)
Q Consensus 607 ~~~~kli~~DiDGTL~~~-----~---------------------------------~~~~~~~l~~l~~~g~~~~i~vv 648 (895)
+.+|+.+++|+|.||.+. . -+...+.|+.+++. ..++
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~-----yel~ 77 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKL-----YEMH 77 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhh-----cEEE
Confidence 367889999999999211 0 12455666666643 6777
Q ss_pred EEcCCCHHHHHHHHHhCCC
Q 002665 649 LSTALTILELHSLLVSGGL 667 (895)
Q Consensus 649 iaTGR~~~~~~~~l~~l~l 667 (895)
|.|.-+...+..+++.++.
T Consensus 78 I~T~~~~~yA~~vl~~ldp 96 (156)
T TIGR02250 78 VYTMGTRAYAQAIAKLIDP 96 (156)
T ss_pred EEeCCcHHHHHHHHHHhCc
Confidence 7777777777777777654
No 331
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=80.54 E-value=1.3 Score=48.73 Aligned_cols=70 Identities=16% Similarity=0.013 Sum_probs=45.9
Q ss_pred ccccccEEEEEEecCCCChhh--------------HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCC
Q 002665 605 ALRRRKYVFVIAADCDTTSDF--------------LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPL 670 (895)
Q Consensus 605 ~~~~~~kli~~DiDGTL~~~~--------------~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~ 670 (895)
..+..+|+|++|||||+|+.. +....++--.+.++| ..+..-|.|++..+..-..-+
T Consensus 370 vwr~n~kiVVsDiDGTITkSD~~Ghv~~miGkdwth~gVAkLYtdI~rNG----YkI~YltsR~~Gqa~sTrsyl----- 440 (580)
T COG5083 370 VWRNNKKIVVSDIDGTITKSDALGHVKQMIGKDWTHNGVAKLYTDIDRNG----YKIKYLTSRSYGQADSTRSYL----- 440 (580)
T ss_pred EEeCCCcEEEEecCCcEEehhhHHHHHHHhccchhhcchhhhhhhhccCc----eEEEEEecccccchhhhhhHH-----
Confidence 345789999999999996432 223344445555665 899999999987654332221
Q ss_pred CCCEEEeCCCceEecC
Q 002665 671 AFDAFICNSGSELYYP 686 (895)
Q Consensus 671 ~~d~~I~~nGa~I~~~ 686 (895)
..||.||.+....
T Consensus 441 ---rnieQngykLpdg 453 (580)
T COG5083 441 ---RNIEQNGYKLPDG 453 (580)
T ss_pred ---HhhhhcCccCCCC
Confidence 2467777766654
No 332
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=80.01 E-value=3.7 Score=40.10 Aligned_cols=57 Identities=12% Similarity=-0.032 Sum_probs=36.8
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCceEec
Q 002665 625 FLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNSGSELYY 685 (895)
Q Consensus 625 ~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~I~~ 685 (895)
+.+..++.++++++++ +.|++.||-+-..+.++++.+.-.-.....=|.+|-.+|+.
T Consensus 74 Idp~fKef~e~ike~d----i~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~ 130 (220)
T COG4359 74 IDPGFKEFVEWIKEHD----IPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHI 130 (220)
T ss_pred cCccHHHHHHHHHHcC----CCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcC
Confidence 3456677888888886 77777777777788888888751100012345666666654
No 333
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=77.96 E-value=3.3 Score=40.83 Aligned_cols=39 Identities=10% Similarity=-0.001 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCC
Q 002665 626 LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 668 (895)
Q Consensus 626 ~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~ 668 (895)
++..+++...|++.| ..++++||==...+.++..+||++
T Consensus 90 T~Gi~eLv~~L~~~~----~~v~liSGGF~~~i~~Va~~Lgi~ 128 (227)
T KOG1615|consen 90 TPGIRELVSRLHARG----TQVYLISGGFRQLIEPVAEQLGIP 128 (227)
T ss_pred CCCHHHHHHHHHHcC----CeEEEEcCChHHHHHHHHHHhCCc
Confidence 456678888899986 899999999999999999999984
No 334
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=76.70 E-value=7.1 Score=45.25 Aligned_cols=106 Identities=18% Similarity=0.176 Sum_probs=71.4
Q ss_pred CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCC-CCCCChHHHHHHHcCCCEEEcCCCCc---------------ccccc-
Q 002665 386 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAF-IEPFGLTLIEAAAYGLPIVATKNGGP---------------VDIHR- 448 (895)
Q Consensus 386 ~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~-~eg~gl~~~Ea~a~G~PVvat~~gg~---------------~eiv~- 448 (895)
.|.=+|.++.+|+..+++.| .|||=.-. .| |-+.+||+|.|+|.|-...-.+ +++-.
T Consensus 323 ~V~NHG~l~~~ef~~lL~~a----kvfiGlGfP~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQ 396 (559)
T PF15024_consen 323 FVKNHGILSGDEFQQLLRKA----KVFIGLGFPYE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQ 396 (559)
T ss_pred hhhhcCcCCHHHHHHHHHhh----hEeeecCCCCC--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccC
Confidence 34456888889999999999 89883311 12 3478999999998886553211 12211
Q ss_pred --------cCCceEEeCCCCHHHHHHHHHHHhhCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHHHH
Q 002665 449 --------VLDNGLLVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSYLSRIS 506 (895)
Q Consensus 449 --------~~~~g~lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~v-~~~s~~~~a~~~~~~l~ 506 (895)
....-+.|+-+|.+++.+||+++|+.+- .-++ -+|+-+.+.+++-..++
T Consensus 397 hPY~e~~iG~PhVytVd~~n~~~v~~Avk~il~~~v---------~Py~P~efT~egmLeRv~~~ie 454 (559)
T PF15024_consen 397 HPYAEEFIGEPHVYTVDINNSTEVEAAVKAILATPV---------EPYLPYEFTCEGMLERVNALIE 454 (559)
T ss_pred ChHHHhhCCCCeEEEEcCCCHHHHHHHHHHHHhcCC---------CCcCCcccCHHHHHHHHHHHHH
Confidence 1235788899999999999999997542 1334 46776666666555544
No 335
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=75.37 E-value=3 Score=41.63 Aligned_cols=40 Identities=8% Similarity=-0.026 Sum_probs=31.6
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEE
Q 002665 797 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTV 839 (895)
Q Consensus 797 sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gV 839 (895)
-+-..+...++++|+++++++. +||+.. | ++.=+.+|.-+
T Consensus 143 P~p~~~~~~~~~~~~~~~~~l~-igDs~~-d-i~aA~~aG~~~ 182 (188)
T PRK10725 143 PAPDTFLRCAQLMGVQPTQCVV-FEDADF-G-IQAARAAGMDA 182 (188)
T ss_pred CChHHHHHHHHHcCCCHHHeEE-EeccHh-h-HHHHHHCCCEE
Confidence 3456789999999999999999 677766 7 88777777643
No 336
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=75.21 E-value=47 Score=35.60 Aligned_cols=118 Identities=19% Similarity=0.140 Sum_probs=71.8
Q ss_pred chhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhhcccCCCCCcEEEEecCCCCCcccccc
Q 002665 33 GQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQKE 112 (895)
Q Consensus 33 G~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~g~~i~r~~~~~~~~~l~k~ 112 (895)
|-.+.+..|.+.|.++| |+|-|++-.++.|.....-=..... |++....+|+.|.-+|....
T Consensus 63 GKSTli~~L~~~l~~~G--~rVaVlAVDPSSp~TGGsiLGDRiR---------M~~~~~~~~vFiRs~~srG~------- 124 (323)
T COG1703 63 GKSTLIEALGRELRERG--HRVAVLAVDPSSPFTGGSILGDRIR---------MQRLAVDPGVFIRSSPSRGT------- 124 (323)
T ss_pred chHHHHHHHHHHHHHCC--cEEEEEEECCCCCCCCccccccHhh---------HHhhccCCCeEEeecCCCcc-------
Confidence 56778899999999999 9999999876655432211111111 23333345666665554322
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHHhccCCCCEEEEeCCCchhh
Q 002665 113 LLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDK 184 (895)
Q Consensus 113 ~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~ 184 (895)
+. .+.+..+...+.+.. .-+|+|+...-..|-.-.-+...-.+-++++..+.+-+.
T Consensus 125 -----lG----GlS~at~~~i~~ldA-------aG~DvIIVETVGvGQsev~I~~~aDt~~~v~~pg~GD~~ 180 (323)
T COG1703 125 -----LG----GLSRATREAIKLLDA-------AGYDVIIVETVGVGQSEVDIANMADTFLVVMIPGAGDDL 180 (323)
T ss_pred -----ch----hhhHHHHHHHHHHHh-------cCCCEEEEEecCCCcchhHHhhhcceEEEEecCCCCcHH
Confidence 21 222333333333333 459999998776665555666666788888888875543
No 337
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=74.99 E-value=9 Score=37.79 Aligned_cols=31 Identities=13% Similarity=0.125 Sum_probs=25.8
Q ss_pred CCCcEEEeccCCchHHHHHHhccC------CCCEEEE
Q 002665 146 IWPVAIHGHYADAGDAAALLSGAL------NVPMVFT 176 (895)
Q Consensus 146 ~~pDvIh~h~~~~~~~~~~~~~~~------~ip~v~t 176 (895)
.+||+|.++.+.++.....+++.+ +.++|+-
T Consensus 91 ~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyI 127 (170)
T PF08660_consen 91 ERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYI 127 (170)
T ss_pred hCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEE
Confidence 469999999998888888888877 8888774
No 338
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=74.78 E-value=21 Score=35.85 Aligned_cols=73 Identities=10% Similarity=0.066 Sum_probs=31.0
Q ss_pred CCCcEEEeccCCchHHHHHHhccCCCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCEEEec
Q 002665 146 IWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEIVITS 225 (895)
Q Consensus 146 ~~pDvIh~h~~~~~~~~~~~~~~~~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~vi~~ 225 (895)
++||++.......=......++..|+|+++.---+...... .|+..+. .-+..++..|.|.+.
T Consensus 94 ~~P~~~i~~EtElWPnll~~a~~~~ip~~LvNarls~~s~~---------------~~~~~~~--~~r~~l~~f~~i~aq 156 (186)
T PF04413_consen 94 WRPDLLIWVETELWPNLLREAKRRGIPVVLVNARLSERSFR---------------RYRRFPF--LFRPLLSRFDRILAQ 156 (186)
T ss_dssp H--SEEEEES----HHHHHH-----S-EEEEEE-----------------------------H--HHHHHGGG-SEEEES
T ss_pred hCCCEEEEEccccCHHHHHHHhhcCCCEEEEeeeeccccch---------------hhhhhHH--HHHHHHHhCCEEEEC
Confidence 35999887654322223356667799986643222111111 1111111 134468999999999
Q ss_pred CHHHHHHHHH
Q 002665 226 TRQEIEEQWR 235 (895)
Q Consensus 226 s~~~~~~~~~ 235 (895)
|+...+.+..
T Consensus 157 s~~da~r~~~ 166 (186)
T PF04413_consen 157 SEADAERFRK 166 (186)
T ss_dssp SHHHHHHHHT
T ss_pred CHHHHHHHHH
Confidence 9998887644
No 339
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=73.94 E-value=3.2 Score=41.87 Aligned_cols=36 Identities=14% Similarity=0.005 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEcCCCHH-------HHHHHHHhC
Q 002665 626 LEIIKKVVEAAGKDNSAGFIGFVLSTALTIL-------ELHSLLVSG 665 (895)
Q Consensus 626 ~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~-------~~~~~l~~l 665 (895)
.+...+++++|.+.| ..+++.|+|+.. ...+|+++.
T Consensus 75 ~~gA~e~l~~L~~~g----~~~~~Itar~~~~~~~~~~~k~~Wl~~h 117 (191)
T PF06941_consen 75 IPGAVEALKKLRDKG----HEIVIITARPPEFPDHSAEEKREWLERH 117 (191)
T ss_dssp -TTHHHHHHHHHTST----TEEEEEEE-SSSSGCCCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcC----CcEEEEEecCccccchHHHHHHHHHHHH
Confidence 445677888888875 667777778643 456788775
No 340
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=72.47 E-value=25 Score=40.77 Aligned_cols=85 Identities=13% Similarity=0.149 Sum_probs=57.6
Q ss_pred CCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCC-CEEEcCC--CCcccccccCCceEEeCCCCHHHHHHHHHHH
Q 002665 395 QSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGL-PIVATKN--GGPVDIHRVLDNGLLVDPHDQQSIADALLKL 471 (895)
Q Consensus 395 ~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~-PVvat~~--gg~~eiv~~~~~g~lv~p~d~~~la~ai~~l 471 (895)
.......++.+ -.++.|+-.+...-.+.||+.+|| |||.++. ....+.+.-..-++.++ .+++-+.|.+.
T Consensus 334 ~~~y~~~m~~S----~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~~~fSV~v~---~~~v~~~~~~i 406 (464)
T KOG1021|consen 334 PLNYMEGMQDS----KFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDWTEFSVFVP---EKDVPELIKNI 406 (464)
T ss_pred cchHHHHhhcC----eEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCccceEEEEEEE---HHHhhhHHHHH
Confidence 46788899999 899999888888899999999996 9998885 34444444344566664 44444445555
Q ss_pred hh--CHHHHHHHHHHHH
Q 002665 472 VS--DKQLWERCRQNGL 486 (895)
Q Consensus 472 l~--~~~~~~~~~~~~~ 486 (895)
|. ..++...|.++-.
T Consensus 407 L~~i~~~~~~~m~~~v~ 423 (464)
T KOG1021|consen 407 LLSIPEEEVLRMRENVI 423 (464)
T ss_pred HHhcCHHHHHHHHHHHH
Confidence 54 3444444444444
No 341
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=72.32 E-value=6.2 Score=43.24 Aligned_cols=215 Identities=15% Similarity=0.187 Sum_probs=105.2
Q ss_pred ccEEEEEEecCCC--C----hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHH----------HHHhC-CCCCCC
Q 002665 609 RKYVFVIAADCDT--T----SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHS----------LLVSG-GLSPLA 671 (895)
Q Consensus 609 ~~kli~~DiDGTL--~----~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~----------~l~~l-~l~~~~ 671 (895)
.=+|+-||=|+|| + ...++.....++-|++. +.|.|+|.=.+....+ .+++. .++...
T Consensus 146 ~L~LvTFDgDvTLY~DG~sl~~d~pvi~~ii~LL~~g-----v~VgIVTAAGY~~a~kY~~RL~GLL~a~~~~~~Lt~~q 220 (408)
T PF06437_consen 146 GLKLVTFDGDVTLYEDGASLEPDNPVIPRIIKLLRRG-----VKVGIVTAAGYPGAEKYEERLHGLLDAFKDSTDLTPEQ 220 (408)
T ss_pred CceEEEEcCCcccccCCCCCCCCchHHHHHHHHHhcC-----CeEEEEeCCCCCChHHHHHHHHHHHHHHHhccCCCHHH
Confidence 5689999999999 1 34555666666655553 7888888665544433 33333 332100
Q ss_pred CCEEEeCCCc--eEecCCCCCCCCCCCCcccCcchhhhhccccCcchHHHHHHHHhhhccCCC--CccCccccccccccc
Q 002665 672 FDAFICNSGS--ELYYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKK--GEEGKIVEEDESRST 747 (895)
Q Consensus 672 ~d~~I~~nGa--~I~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 747 (895)
-..++-..|- +.+.-.. +....+...++..|.......|..+.+..+++.......... ..-+..++..+
T Consensus 221 k~~l~VMGGEsNYLfr~~~--~~~~~L~~v~~~~W~~~~m~~W~~~dI~~lLD~AE~~L~~~~~~l~Lpa~IiRK~---- 294 (408)
T PF06437_consen 221 KSNLYVMGGESNYLFRYDP--ESPHGLEFVPREEWLLPEMKTWSEEDITELLDIAEAALRDCVKRLNLPATIIRKE---- 294 (408)
T ss_pred hcCEEEecccceeEEEecC--CCCCCeEEccHHhccCccccCcCHHHHHHHHHHHHHHHHHHHHHcCCCeeEEeec----
Confidence 0122222332 1211110 001124666778898777788998888777643322211100 00000000000
Q ss_pred ceEEEEEecCCC---CCcCHHH----HHHHHHhhc--CeEEEEEeeC-C-eeEEeecCCCChHHHHHHHHHHh----CCC
Q 002665 748 IHCYAFEVTNPQ---MIPPVKE----LRKLMRIQA--LRCHVIYCQN-G-TKLHVIPVLASRSQALRYLHVRW----GID 812 (895)
Q Consensus 748 ~~k~~~~~~~~~---~~~~~~~----l~~~l~~~~--~~~~~~~s~~-~-~~lEI~p~g~sKg~al~~L~~~l----gi~ 812 (895)
-.+-.. ..+. .-+.++| ++..|.... .++.+.--+| + -|+|| .+|.-|++.|.+++ +|.
T Consensus 295 -RAVGiv-P~~~~ki~rE~LEE~VL~vq~~L~~~~~~~~ipfCAFNGGsDVwVDI----GdKs~GV~~lQ~y~~~~~~i~ 368 (408)
T PF06437_consen 295 -RAVGIV-PKPGVKIIREQLEEIVLTVQKTLEESPPGRRIPFCAFNGGSDVWVDI----GDKSLGVRALQKYFDPEGGIK 368 (408)
T ss_pred -ceeeEe-cCCCCcchhhhHHHHHHHHHHHHHhcCCCCCCceeeecCCcceEEEc----CCcHHhHHHHHHHHHhccCCC
Confidence 011111 1111 0111222 233333321 1233332222 2 25666 58999999999999 999
Q ss_pred cccEEEEeCcC----C-CccccccccCcceEEEEcCc
Q 002665 813 LSNVVVIAGEC----G-DTDYEGLLGGVHKTVILKGV 844 (895)
Q Consensus 813 ~~~viafgGD~----n-n~D~~~Ml~~ag~gVaMgNA 844 (895)
+++++= +||. + | | .. =+.++..+-+.|=
T Consensus 369 ~~~tLH-VGDQF~s~GaN-D-fk-aR~a~~t~WIasP 401 (408)
T PF06437_consen 369 PSETLH-VGDQFLSAGAN-D-FK-ARLACTTAWIASP 401 (408)
T ss_pred ccceee-ehhhhhccCCc-c-hh-hhhhceeeEecCH
Confidence 999998 6663 2 5 5 11 1234555555543
No 342
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=72.28 E-value=6.6 Score=47.95 Aligned_cols=42 Identities=24% Similarity=0.324 Sum_probs=38.3
Q ss_pred ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 622 TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 622 ~~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
.+...+.++..+++|.++. ++.+.|||-++..+....++.|+
T Consensus 703 eNkLK~~T~~VI~eL~~An----IRtVMcTGDNllTaisVakeCgm 744 (1140)
T KOG0208|consen 703 ENKLKEETKRVIDELNRAN----IRTVMCTGDNLLTAISVAKECGM 744 (1140)
T ss_pred ecccccccHHHHHHHHhhc----ceEEEEcCCchheeeehhhcccc
Confidence 3778899999999999985 99999999999999999999987
No 343
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=72.22 E-value=20 Score=46.22 Aligned_cols=184 Identities=9% Similarity=-0.029 Sum_probs=0.0
Q ss_pred cccEEEEEEecCCCChhhHHHHHHHHHHHhccCCCCceEEEEE-----cCCCHHHHHHHHHhCCCCCCCCCEEEeCCCce
Q 002665 608 RRKYVFVIAADCDTTSDFLEIIKKVVEAAGKDNSAGFIGFVLS-----TALTILELHSLLVSGGLSPLAFDAFICNSGSE 682 (895)
Q Consensus 608 ~~~kli~~DiDGTL~~~~~~~~~~~l~~l~~~g~~~~i~vvia-----TGR~~~~~~~~l~~l~l~~~~~d~~I~~nGa~ 682 (895)
.+.|.++||+||||.+..........+.+++.| +.+-.. .|++...+...+...--
T Consensus 73 ~~ikaVIFDlDGTLiDS~~~~~~a~~~~~~~~G----~~it~e~~~~~~G~~~~~~~~~~~~~~~--------------- 133 (1057)
T PLN02919 73 GKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMG----VEVTVEDFVPFMGTGEANFLGGVASVKG--------------- 133 (1057)
T ss_pred CCCCEEEECCCCCeEeChHHHHHHHHHHHHHcC----CCCCHHHHHHHhCCCHHHHHHHHHHhcC---------------
Q ss_pred EecCCCCCCCCCCCCcccCcchhhhhccccCcchHHHHHHHHhhhccCCCCccCcccccccccccceEEEEEecCCCCCc
Q 002665 683 LYYPSSSTEDNHGLPFLVDLDYRFHTEYRWGGEGLRKTLVRWAASVNDKKGEEGKIVEEDESRSTIHCYAFEVTNPQMIP 762 (895)
Q Consensus 683 I~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~ 762 (895)
+...-..+..+.+...+...+.... .....+
T Consensus 134 -------------------------l~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~p 164 (1057)
T PLN02919 134 -------------------------VKGFDPDAAKKRFFEIYLEKYAKPN------------------------SGIGFP 164 (1057)
T ss_pred -------------------------CCCCCHHHHHHHHHHHHHHHhhhcc------------------------cCccCc
Q ss_pred CHHHHHHHHHhhcCeEEEEEeeCCe--------------------eEEeecCCCChHHHHHHHHHHhCCCcccEEEEeCc
Q 002665 763 PVKELRKLMRIQALRCHVIYCQNGT--------------------KLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGE 822 (895)
Q Consensus 763 ~~~~l~~~l~~~~~~~~~~~s~~~~--------------------~lEI~p~g~sKg~al~~L~~~lgi~~~~viafgGD 822 (895)
.+.++.+.|.+.+..+-++.+.... .-|-....=-+......+++++|++++++++ +||
T Consensus 165 G~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~-IgD 243 (1057)
T PLN02919 165 GALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVV-IED 243 (1057)
T ss_pred cHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEE-EcC
Q ss_pred CCCccccccccCcceEEEEcCch-hhhHhhhhcCCCCCCCc
Q 002665 823 CGDTDYEGLLGGVHKTVILKGVG-ESARKLHANRNYSLEDV 862 (895)
Q Consensus 823 ~nn~D~~~Ml~~ag~gVaMgNA~-~~~~~~~~~~~~~~~~~ 862 (895)
+.. | ++.=+.+|.-++.-+.. ...++......+.++++
T Consensus 244 s~~-D-i~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l 282 (1057)
T PLN02919 244 ALA-G-VQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDI 282 (1057)
T ss_pred CHH-H-HHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECCh
No 344
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=71.29 E-value=8 Score=34.13 Aligned_cols=81 Identities=20% Similarity=0.262 Sum_probs=52.4
Q ss_pred EEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEE-eCCCCCCCc--HHHHHHHhhcCCcEEEecCCC---CCCChHH
Q 002665 352 LIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVA-YPKHHKQSD--VPDIYRLAAKTKGVFINPAFI---EPFGLTL 425 (895)
Q Consensus 352 livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~-~~g~~~~~e--l~~ly~~a~~~~Dv~v~ps~~---eg~gl~~ 425 (895)
+|+|+.++ ....+...++++|..-.++ -.+...... ++.....| |++|++.-. ..+..+-
T Consensus 3 liVGG~~~----------~~~~~~~~~~~~G~~~~~hg~~~~~~~~~~~l~~~i~~a----D~VIv~t~~vsH~~~~~vk 68 (97)
T PF10087_consen 3 LIVGGRED----------RERRYKRILEKYGGKLIHHGRDGGDEKKASRLPSKIKKA----DLVIVFTDYVSHNAMWKVK 68 (97)
T ss_pred EEEcCCcc----------cHHHHHHHHHHcCCEEEEEecCCCCccchhHHHHhcCCC----CEEEEEeCCcChHHHHHHH
Confidence 57777443 2456667788888754332 023433444 88888888 999988642 3344455
Q ss_pred HHHHHcCCCEEEcCCCCcccc
Q 002665 426 IEAAAYGLPIVATKNGGPVDI 446 (895)
Q Consensus 426 ~Ea~a~G~PVvat~~gg~~ei 446 (895)
-+|-..|+|++.+...|...+
T Consensus 69 ~~akk~~ip~~~~~~~~~~~l 89 (97)
T PF10087_consen 69 KAAKKYGIPIIYSRSRGVSSL 89 (97)
T ss_pred HHHHHcCCcEEEECCCCHHHH
Confidence 666777999999987665554
No 345
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=70.05 E-value=1.6e+02 Score=31.66 Aligned_cols=40 Identities=28% Similarity=0.373 Sum_probs=29.1
Q ss_pred CCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcC
Q 002665 391 KHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATK 439 (895)
Q Consensus 391 g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~ 439 (895)
...+.+|+..+++.| |++|-..+ . .++=|+.+|+|+++-.
T Consensus 237 ~~~~~~e~~~~i~~~----~~vI~~Rl-H----~~I~A~~~gvP~i~i~ 276 (298)
T TIGR03609 237 SPLDPEELLGLFASA----RLVIGMRL-H----ALILAAAAGVPFVALS 276 (298)
T ss_pred ecCCHHHHHHHHhhC----CEEEEech-H----HHHHHHHcCCCEEEee
Confidence 445667899999999 98663322 1 4677899999999753
No 346
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=69.97 E-value=5.9 Score=38.76 Aligned_cols=53 Identities=17% Similarity=-0.028 Sum_probs=39.3
Q ss_pred cEEEEEEecCCCC-------h--------------------hhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHH
Q 002665 610 KYVFVIAADCDTT-------S--------------------DFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLL 662 (895)
Q Consensus 610 ~kli~~DiDGTL~-------~--------------------~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l 662 (895)
|+.+++|+|+||. . ..-+...+.|+.|.+. ..++|.|--+...+..++
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~-----yei~I~Ts~~~~yA~~il 75 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKW-----YELVIFTASLEEYADPVL 75 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhc-----CEEEEEcCCcHHHHHHHH
Confidence 4689999999992 1 1234567888888765 678888877788888888
Q ss_pred HhCCC
Q 002665 663 VSGGL 667 (895)
Q Consensus 663 ~~l~l 667 (895)
+.++.
T Consensus 76 ~~ldp 80 (162)
T TIGR02251 76 DILDR 80 (162)
T ss_pred HHHCc
Confidence 88765
No 347
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=68.58 E-value=40 Score=35.92 Aligned_cols=123 Identities=11% Similarity=0.091 Sum_probs=69.7
Q ss_pred CCCCcEEEEEeCCCCC-------CCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHc-CCC
Q 002665 313 NPRKPMILALARPDPK-------KNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKY-DLY 384 (895)
Q Consensus 313 ~~~~~~Il~vgrl~~~-------Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~-~l~ 384 (895)
..++++|++......- ......++.+..+.+..| +..|++=..|....... . +.+.+. ...
T Consensus 114 ~~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p--~~~lvvK~HP~~~~~~~--~-------~~~~~~~~~~ 182 (269)
T PF05159_consen 114 SKNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENP--DAKLVVKPHPDERGGNK--Y-------SYLEELPNLP 182 (269)
T ss_pred cCCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCC--CCEEEEEECchhhCCCC--h-------hHhhhhhcCC
Confidence 3567777777765433 244556666666654344 55566654442111110 0 222222 233
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCHHHH
Q 002665 385 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSI 464 (895)
Q Consensus 385 ~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~l 464 (895)
+.+.+... -.+..++..| |.++.- .+.+-+||+.+|+||++-...-.. ..|+..+....+.+
T Consensus 183 ~~~~~~~~---~~~~~Ll~~s----~~Vvti-----nStvGlEAll~gkpVi~~G~~~Y~------~~glt~~~~~~~~~ 244 (269)
T PF05159_consen 183 NVVIIDDD---VNLYELLEQS----DAVVTI-----NSTVGLEALLHGKPVIVFGRAFYA------GWGLTDDRKLDEFW 244 (269)
T ss_pred CeEEECCC---CCHHHHHHhC----CEEEEE-----CCHHHHHHHHcCCceEEecCcccC------CCCccCcCCchhhh
Confidence 33433333 5888999999 876632 577899999999999996554322 24666554444333
No 348
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=68.49 E-value=15 Score=36.50 Aligned_cols=41 Identities=10% Similarity=0.165 Sum_probs=32.4
Q ss_pred EEeecCCCChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccC
Q 002665 789 LHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGG 834 (895)
Q Consensus 789 lEI~p~g~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ 834 (895)
.+-+..+-.|+.+|+.|++ |.+.+.+++ +||+.| | ++|..-
T Consensus 151 ~~ptsdsggKa~~i~~lrk--~~~~~~~~m-vGDGat-D-lea~~p 191 (227)
T KOG1615|consen 151 NEPTSDSGGKAEVIALLRK--NYNYKTIVM-VGDGAT-D-LEAMPP 191 (227)
T ss_pred CCccccCCccHHHHHHHHh--CCChheeEE-ecCCcc-c-cccCCc
Confidence 4455677789999999999 777777777 888887 8 887765
No 349
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=67.42 E-value=2.2e+02 Score=32.02 Aligned_cols=77 Identities=19% Similarity=0.301 Sum_probs=48.5
Q ss_pred CCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCC-CCcccccccC-Cc--eEEeCCCCHHHHHHHHHH
Q 002665 395 QSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN-GGPVDIHRVL-DN--GLLVDPHDQQSIADALLK 470 (895)
Q Consensus 395 ~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~-gg~~eiv~~~-~~--g~lv~p~d~~~la~ai~~ 470 (895)
.+++...++.+ |++|-.=+ -.++=|++.|+|+|+=.. +-...+.++- -. ..-+.|.+.+.+.....+
T Consensus 276 ~~~~~~~l~~~----dl~Vg~R~-----HsaI~al~~g~p~i~i~Y~~K~~~l~~~~gl~~~~~~i~~~~~~~l~~~~~e 346 (385)
T COG2327 276 AEELGGILAAC----DLIVGMRL-----HSAIMALAFGVPAIAIAYDPKVRGLMQDLGLPGFAIDIDPLDAEILSAVVLE 346 (385)
T ss_pred HHHHHHHhccC----ceEEeehh-----HHHHHHHhcCCCeEEEeecHHHHHHHHHcCCCcccccCCCCchHHHHHHHHH
Confidence 35667788888 88773211 256779999999999653 2223333221 12 334457788889988888
Q ss_pred Hhh-CHHHHHH
Q 002665 471 LVS-DKQLWER 480 (895)
Q Consensus 471 ll~-~~~~~~~ 480 (895)
.++ .++.+++
T Consensus 347 ~~~~~~~~~~~ 357 (385)
T COG2327 347 RLTKLDELRER 357 (385)
T ss_pred HHhccHHHHhh
Confidence 887 4444333
No 350
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=65.51 E-value=29 Score=40.62 Aligned_cols=109 Identities=19% Similarity=0.253 Sum_probs=65.9
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCC-C---CcccccccCCceEEeCCC
Q 002665 384 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN-G---GPVDIHRVLDNGLLVDPH 459 (895)
Q Consensus 384 ~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~-g---g~~eiv~~~~~g~lv~p~ 459 (895)
.++|.+.+++|+.++. .+-.+.++||- +-|+|-+ +|++.+|+|+|+... | -....+.+...+.+.+..
T Consensus 334 ~~nV~~~~W~PQ~~ll----l~H~~v~~FvT---HgG~nSt-~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~ 405 (496)
T KOG1192|consen 334 RGNVVLSKWAPQNDLL----LDHPAVGGFVT---HGGWNST-LESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKR 405 (496)
T ss_pred cCceEEecCCCcHHHh----cCCCcCcEEEE---CCcccHH-HHHHhcCCceecCCccccchhHHHHHHhCCCEEEEehh
Confidence 4579999999999876 23223366652 5666666 999999999996553 2 122333333333333333
Q ss_pred C--HHHHHHHHHHHhhCHHHHHHHHHHHHHHH-hhCCHHHHHHHH
Q 002665 460 D--QQSIADALLKLVSDKQLWERCRQNGLKNI-HQFSWPEHCKSY 501 (895)
Q Consensus 460 d--~~~la~ai~~ll~~~~~~~~~~~~~~~~v-~~~s~~~~a~~~ 501 (895)
+ ...+.+++..++++++-.+...+-+...- +..+. ..+..+
T Consensus 406 ~~~~~~~~~~~~~il~~~~y~~~~~~l~~~~~~~p~~~-~~~~~~ 449 (496)
T KOG1192|consen 406 DLVSEELLEAIKEILENEEYKEAAKRLSEILRDQPISP-ELAVKW 449 (496)
T ss_pred hcCcHHHHHHHHHHHcChHHHHHHHHHHHHHHcCCCCH-HHHHHH
Confidence 2 22378999999988876555555554443 34555 444433
No 351
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=64.87 E-value=8.6 Score=39.03 Aligned_cols=41 Identities=10% Similarity=0.035 Sum_probs=38.1
Q ss_pred hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 623 SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 623 ~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
..+.+.+.++++.|++.| +.++++||-+...+..+.+++|+
T Consensus 126 d~~~~~~~~~l~~L~~~G----i~~~i~TGD~~~~a~~~~~~lgi 166 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAG----IKVAILTGDNESTASAIAKQLGI 166 (215)
T ss_dssp EEBHTTHHHHHHHHHHTT----EEEEEEESSEHHHHHHHHHHTTS
T ss_pred CcchhhhhhhhhhhhccC----cceeeeecccccccccccccccc
Confidence 467788999999999997 99999999999999999999998
No 352
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=64.73 E-value=11 Score=37.95 Aligned_cols=44 Identities=18% Similarity=0.243 Sum_probs=35.5
Q ss_pred HHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEe
Q 002665 629 IKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFIC 677 (895)
Q Consensus 629 ~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~ 677 (895)
..++|+.|+++| +.++|+||++...+..+++.+|+. .-+|.+++
T Consensus 111 ~~~~L~~l~~~g----~~~~i~T~~~~~~~~~~l~~~gl~-~~f~~~~~ 154 (197)
T TIGR01548 111 PKGLLRELHRAP----KGMAVVTGRPRKDAAKFLTTHGLE-ILFPVQIW 154 (197)
T ss_pred HHHHHHHHHHcC----CcEEEECCCCHHHHHHHHHHcCch-hhCCEEEe
Confidence 378888888876 999999999999999999999984 23455554
No 353
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=63.83 E-value=47 Score=40.45 Aligned_cols=41 Identities=12% Similarity=0.113 Sum_probs=36.8
Q ss_pred hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 623 SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 623 ~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
....+..+++++..+++| +.|-..||-+...++.+..++|+
T Consensus 646 DPvRPgV~~AV~~Cq~AG----ItVRMVTGDNI~TAkAIA~eCGI 686 (1034)
T KOG0204|consen 646 DPVRPGVPEAVQLCQRAG----ITVRMVTGDNINTAKAIARECGI 686 (1034)
T ss_pred CCCCCCcHHHHHHHHHcC----cEEEEEeCCcHHHHHHHHHHccc
Confidence 345677899999999987 99999999999999999999997
No 354
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=63.18 E-value=8.7 Score=35.49 Aligned_cols=50 Identities=6% Similarity=0.020 Sum_probs=42.1
Q ss_pred EEEecCCCC--hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCC
Q 002665 614 VIAADCDTT--SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 668 (895)
Q Consensus 614 ~~DiDGTL~--~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~ 668 (895)
+-++++|+. ...-+++.+.++.|++. +.++||||-.+.++.+.++-.|++
T Consensus 18 ~~~v~~tiatgGklf~ev~e~iqeL~d~-----V~i~IASgDr~gsl~~lae~~gi~ 69 (152)
T COG4087 18 AGKVLYTIATGGKLFSEVSETIQELHDM-----VDIYIASGDRKGSLVQLAEFVGIP 69 (152)
T ss_pred cceEEEEEccCcEEcHhhHHHHHHHHHh-----heEEEecCCcchHHHHHHHHcCCc
Confidence 456788883 56777888889999887 899999999999999999998884
No 355
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=63.10 E-value=7.2 Score=42.28 Aligned_cols=70 Identities=20% Similarity=0.207 Sum_probs=48.8
Q ss_pred CcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCC-CEEEcCC--CCcccccccCCceEEeCCCCHHHHHHHHH
Q 002665 396 SDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGL-PIVATKN--GGPVDIHRVLDNGLLVDPHDQQSIADALL 469 (895)
Q Consensus 396 ~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~-PVvat~~--gg~~eiv~~~~~g~lv~p~d~~~la~ai~ 469 (895)
.+..+.|+.+ ..++.|.-..++..-++|||++|| |||.++. -...+++.=....+.++..+..++.+.|+
T Consensus 228 ~~~~~~l~~S----~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~~~~l~~iL~ 300 (302)
T PF03016_consen 228 SEYMELLRNS----KFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEADLPELPEILR 300 (302)
T ss_pred hHHHHhcccC----eEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHHHHHHHHHHh
Confidence 4578888888 888887655567889999999996 8887662 33455554344577776666655555443
No 356
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=62.72 E-value=3.8 Score=41.69 Aligned_cols=33 Identities=12% Similarity=0.131 Sum_probs=27.3
Q ss_pred HHHHHHHHhCCCcccEEEEeCcCCCccccccccCcc
Q 002665 801 ALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVH 836 (895)
Q Consensus 801 al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag 836 (895)
.+..+++.+++++++|++ +||+-| | ..|++.||
T Consensus 183 ~~~~~i~~l~~~~~~v~~-vGDg~n-D-~~al~~Ag 215 (215)
T PF00702_consen 183 IFLRIIKELQVKPGEVAM-VGDGVN-D-APALKAAG 215 (215)
T ss_dssp HHHHHHHHHTCTGGGEEE-EESSGG-H-HHHHHHSS
T ss_pred hHHHHHHHHhcCCCEEEE-EccCHH-H-HHHHHhCc
Confidence 568889999999998887 666667 7 99999876
No 357
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=62.67 E-value=8.3 Score=40.82 Aligned_cols=152 Identities=19% Similarity=0.234 Sum_probs=90.1
Q ss_pred eC-CCCCCCHHHHHHHHHhcccccCCCcEEE---EEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCC------C
Q 002665 323 AR-PDPKKNITTLVKAFGECRPLRELANLTL---IMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPK------H 392 (895)
Q Consensus 323 gr-l~~~Kgi~~ll~A~~~l~~~~~~~~l~l---ivG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g------~ 392 (895)
+| .+...|...++.++..+..... .+++ ++..-+ +.-+..+.++-+|.+.-...+ +
T Consensus 234 sR~pea~~nl~~il~slcal~~~~a--~vvfw~ai~~~lp------------l~~l~~l~e~~gWq~~ad~~~kdnc~l~ 299 (412)
T COG4370 234 SRVPEAQTNLAVILGSLCALPAMFA--LVVFWAAIAPELP------------LLLLWTLEERQGWQPLADRFGKDNCSLW 299 (412)
T ss_pred CCChHHHhhHHHHHHHHhhhHHHHH--HHHHHhccCcCCC------------HHHHHHHHHhcCcchhhhhhccCceEEE
Confidence 35 5667899999988777643221 1111 122222 233445555666654322222 3
Q ss_pred CCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHH-HHHcCCCEEEcCCCCcc------ccccc--CCceEEeCCCCHHH
Q 002665 393 HKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIE-AAAYGLPIVATKNGGPV------DIHRV--LDNGLLVDPHDQQS 463 (895)
Q Consensus 393 ~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~E-a~a~G~PVvat~~gg~~------eiv~~--~~~g~lv~p~d~~~ 463 (895)
++++...+++..| |+.+ +|.-++.| ++..|+|||+...-|+. |--.. +..-.+++| ..+
T Consensus 300 lsqqsfadiLH~a----daal------gmAGTAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~~--~aq 367 (412)
T COG4370 300 LSQQSFADILHAA----DAAL------GMAGTATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVRP--EAQ 367 (412)
T ss_pred EeHHHHHHHHHHH----HHHH------HhccchHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecCC--chh
Confidence 4567899999999 8855 56666665 66779999998864432 21100 223445654 334
Q ss_pred HHHHHHH-HhhCHHHHHHHHHHHHHHH-hhCCHHHHHHH
Q 002665 464 IADALLK-LVSDKQLWERCRQNGLKNI-HQFSWPEHCKS 500 (895)
Q Consensus 464 la~ai~~-ll~~~~~~~~~~~~~~~~v-~~~s~~~~a~~ 500 (895)
.+.++.+ +|.|++....++.|+++++ +.=...++++.
T Consensus 368 ~a~~~~q~ll~dp~r~~air~nGqrRiGqaGaa~rIAe~ 406 (412)
T COG4370 368 AAAQAVQELLGDPQRLTAIRHNGQRRIGQAGAARRIAEE 406 (412)
T ss_pred hHHHHHHHHhcChHHHHHHHhcchhhccCcchHHHHHHH
Confidence 4555555 8889999999999999998 54444444443
No 358
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=62.51 E-value=43 Score=32.86 Aligned_cols=62 Identities=16% Similarity=0.098 Sum_probs=36.8
Q ss_pred CCCcEEEeccCCchHH-HHHH--hccC-CCCEEEEeCCCchhhHHHHHHhCCCChhhhhhHhhHHHhHHHHHhhccccCE
Q 002665 146 IWPVAIHGHYADAGDA-AALL--SGAL-NVPMVFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELSLDASEI 221 (895)
Q Consensus 146 ~~pDvIh~h~~~~~~~-~~~~--~~~~-~ip~v~t~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~~e~~~~~~ad~ 221 (895)
.+||+|.|.++.+..+ ...+ .... ++|++..+=|+...- +. | .-..+|.
T Consensus 88 ~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvTD~~~~H-------~~--------------W------~~~~~D~ 140 (169)
T PF06925_consen 88 FQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVTDFDTVH-------PF--------------W------IHPGVDR 140 (169)
T ss_pred cCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEcCCCCCC-------cC--------------e------ecCCCCE
Confidence 6799999988764444 3322 2234 577654444441100 00 1 2457899
Q ss_pred EEecCHHHHHHHH
Q 002665 222 VITSTRQEIEEQW 234 (895)
Q Consensus 222 vi~~s~~~~~~~~ 234 (895)
.++.|++..+++.
T Consensus 141 y~Vase~~~~~l~ 153 (169)
T PF06925_consen 141 YFVASEEVKEELI 153 (169)
T ss_pred EEECCHHHHHHHH
Confidence 9999997776653
No 359
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=61.62 E-value=6.2 Score=40.47 Aligned_cols=46 Identities=13% Similarity=-0.009 Sum_probs=32.9
Q ss_pred eecCCCChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEEc
Q 002665 791 VIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILK 842 (895)
Q Consensus 791 I~p~g~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaMg 842 (895)
....|..|-..|+.++ |.+.+.+++ -||+-+ | ++||+.|+..+++.
T Consensus 156 ~~c~g~~Kv~rl~~~~---~~~~~~~~a-YsDS~~-D-~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 156 LRCLGHEKVAQLEQKI---GSPLKLYSG-YSDSKQ-D-NPLLAFCEHRWRVS 201 (210)
T ss_pred ccCCChHHHHHHHHHh---CCChhheEE-ecCCcc-c-HHHHHhCCCcEEEC
Confidence 3345566777776555 456667777 555555 6 99999999999984
No 360
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=60.09 E-value=3.9 Score=40.82 Aligned_cols=33 Identities=27% Similarity=0.420 Sum_probs=27.6
Q ss_pred ChHHHHHHH---HHHhCCCcccEEEEeCcCCCcccccccc
Q 002665 797 SRSQALRYL---HVRWGIDLSNVVVIAGECGDTDYEGLLG 833 (895)
Q Consensus 797 sKg~al~~L---~~~lgi~~~~viafgGD~nn~D~~~Ml~ 833 (895)
+|..+++.+ ... +++.+.+++ +||+.+ | ++||+
T Consensus 157 ~K~~~l~~~~~~~~~-~~~~~~~~~-iGDs~~-D-~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEE-DIDPDRVIA-IGDSIN-D-LPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHH-THTCCEEEE-EESSGG-G-HHHHH
T ss_pred cHHHHHHHHHHHhhc-CCCCCeEEE-EECCHH-H-HHHhC
Confidence 699999999 666 888888888 777777 8 99985
No 361
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=59.82 E-value=9.1 Score=35.35 Aligned_cols=27 Identities=19% Similarity=0.175 Sum_probs=22.0
Q ss_pred CcccEEEEeCcCCCccccccccCcceEEEE
Q 002665 812 DLSNVVVIAGECGDTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 812 ~~~~viafgGD~nn~D~~~Ml~~ag~gVaM 841 (895)
+-+.+++ .||.+| | +-||+.+..||+.
T Consensus 92 ~~~k~vm-VGnGaN-D-~laLr~ADlGI~t 118 (152)
T COG4087 92 RYEKVVM-VGNGAN-D-ILALREADLGICT 118 (152)
T ss_pred CCcEEEE-ecCCcc-h-HHHhhhcccceEE
Confidence 4455666 899888 8 9999999999865
No 362
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=59.59 E-value=8 Score=32.19 Aligned_cols=43 Identities=21% Similarity=0.186 Sum_probs=33.9
Q ss_pred HHHHHHHHHhCCCcccEEEEeCcC-CCccccccccCcce-EEEEcCch
Q 002665 800 QALRYLHVRWGIDLSNVVVIAGEC-GDTDYEGLLGGVHK-TVILKGVG 845 (895)
Q Consensus 800 ~al~~L~~~lgi~~~~viafgGD~-nn~D~~~Ml~~ag~-gVaMgNA~ 845 (895)
..+...+++++++++++++ +||+ .. | +.+=+.+|. +|.+..+.
T Consensus 8 ~~~~~a~~~~~~~~~~~~~-VGD~~~~-D-i~~a~~~G~~~ilV~tG~ 52 (75)
T PF13242_consen 8 GMLEQALKRLGVDPSRCVM-VGDSLET-D-IEAAKAAGIDTILVLTGV 52 (75)
T ss_dssp HHHHHHHHHHTSGGGGEEE-EESSTTT-H-HHHHHHTTSEEEEESSSS
T ss_pred HHHHHHHHHcCCCHHHEEE-EcCCcHh-H-HHHHHHcCCcEEEECCCC
Confidence 3567888999999999999 7777 65 8 999998885 66666555
No 363
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=59.59 E-value=15 Score=38.70 Aligned_cols=47 Identities=19% Similarity=0.051 Sum_probs=38.6
Q ss_pred HHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCC
Q 002665 628 IIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNS 679 (895)
Q Consensus 628 ~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~n 679 (895)
...++|+.|+++| +.++|+|+.+...+...++.+++. ..+|.++|+.
T Consensus 112 gv~e~L~~L~~~g----~~l~I~Tn~~~~~~~~~l~~~gl~-~~Fd~iv~~~ 158 (248)
T PLN02770 112 GLYKLKKWIEDRG----LKRAAVTNAPRENAELMISLLGLS-DFFQAVIIGS 158 (248)
T ss_pred cHHHHHHHHHHcC----CeEEEEeCCCHHHHHHHHHHcCCh-hhCcEEEecC
Confidence 4678888998886 999999999999999999999984 2356676654
No 364
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=58.55 E-value=6.1 Score=39.90 Aligned_cols=32 Identities=16% Similarity=0.215 Sum_probs=25.3
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEeCcCCCcccccc
Q 002665 797 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGL 831 (895)
Q Consensus 797 sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~M 831 (895)
-+-..+...++++|++++++++ +||+.+ | +..
T Consensus 162 P~p~~~~~~~~~~~~~~~~~i~-vGD~~~-D-i~a 193 (197)
T TIGR01548 162 PNPEPLILAAKALGVEACHAAM-VGDTVD-D-IIT 193 (197)
T ss_pred cCHHHHHHHHHHhCcCcccEEE-EeCCHH-H-HHH
Confidence 3566788899999999999998 777776 7 543
No 365
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=57.58 E-value=19 Score=37.11 Aligned_cols=45 Identities=24% Similarity=0.220 Sum_probs=37.9
Q ss_pred HHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEe
Q 002665 628 IIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFIC 677 (895)
Q Consensus 628 ~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~ 677 (895)
..+++|..|+++| +.++|+|+++...+..+++.+|+. .-++.++|
T Consensus 93 gv~e~L~~L~~~g----~~l~i~T~k~~~~~~~~l~~~gl~-~~F~~i~g 137 (220)
T COG0546 93 GVKELLAALKSAG----YKLGIVTNKPERELDILLKALGLA-DYFDVIVG 137 (220)
T ss_pred CHHHHHHHHHhCC----CeEEEEeCCcHHHHHHHHHHhCCc-cccceEEc
Confidence 4688999999987 999999999999999999999985 23455555
No 366
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=57.14 E-value=8.3 Score=39.59 Aligned_cols=41 Identities=12% Similarity=0.018 Sum_probs=30.2
Q ss_pred CCChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEEc
Q 002665 795 LASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILK 842 (895)
Q Consensus 795 g~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaMg 842 (895)
|..|..+++.+. ...+++++ +||+.+ | +.|++.|+..+|=+
T Consensus 142 g~~K~~~l~~~~----~~~~~~i~-iGDg~~-D-~~~a~~Ad~~~ar~ 182 (214)
T TIGR03333 142 GCCKPSLIRKLS----EPNDYHIV-IGDSVT-D-VEAAKQSDLCFARD 182 (214)
T ss_pred CCCHHHHHHHHh----hcCCcEEE-EeCCHH-H-HHHHHhCCeeEehH
Confidence 345888887654 35667777 788887 8 99999999866643
No 367
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=56.65 E-value=66 Score=35.13 Aligned_cols=133 Identities=12% Similarity=-0.031 Sum_probs=70.5
Q ss_pred CCcEEEEEeCCCCCCCH--HHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCC
Q 002665 315 RKPMILALARPDPKKNI--TTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKH 392 (895)
Q Consensus 315 ~~~~Il~vgrl~~~Kgi--~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~ 392 (895)
++.+++..|.-...|.. +...+....+.+ ....++ +++++++.. +....+. +..+ ...+.|.
T Consensus 179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~--~~~~~v-l~~g~~~e~-------~~~~~i~---~~~~---~~~l~g~ 242 (319)
T TIGR02193 179 APYAVLLHATSRDDKTWPEERWRELARLLLA--RGLQIV-LPWGNDAEK-------QRAERIA---EALP---GAVVLPK 242 (319)
T ss_pred CCEEEEEeCCCcccCCCCHHHHHHHHHHHHH--CCCeEE-EeCCCHHHH-------HHHHHHH---hhCC---CCeecCC
Confidence 34556777754566655 356666666532 233443 333333211 1122232 2221 2356688
Q ss_pred CCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccc-cCCc-eEE----eCCCCHHHHHH
Q 002665 393 HKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHR-VLDN-GLL----VDPHDQQSIAD 466 (895)
Q Consensus 393 ~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~-~~~~-g~l----v~p~d~~~la~ 466 (895)
.+..|+.++++.| |++|-. |. ..+-=|.|.|+|+|+=..+....... -+.+ .++ ++.-+++++.+
T Consensus 243 ~sL~el~ali~~a----~l~I~~---DS--gp~HlAaa~g~P~i~lfg~t~p~~~~P~~~~~~~~~~~~~~~I~~~~V~~ 313 (319)
T TIGR02193 243 MSLAEVAALLAGA----DAVVGV---DT--GLTHLAAALDKPTVTLYGATDPGRTGGYGKPNVALLGESGANPTPDEVLA 313 (319)
T ss_pred CCHHHHHHHHHcC----CEEEeC---CC--hHHHHHHHcCCCEEEEECCCCHhhcccCCCCceEEccCccCCCCHHHHHH
Confidence 8889999999999 998854 33 33444678899999855322211110 0111 122 22235677777
Q ss_pred HHHHHh
Q 002665 467 ALLKLV 472 (895)
Q Consensus 467 ai~~ll 472 (895)
++.++|
T Consensus 314 ai~~~~ 319 (319)
T TIGR02193 314 ALEELL 319 (319)
T ss_pred HHHhhC
Confidence 776653
No 368
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=56.55 E-value=16 Score=37.30 Aligned_cols=46 Identities=20% Similarity=0.151 Sum_probs=36.8
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEe
Q 002665 627 EIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFIC 677 (895)
Q Consensus 627 ~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~ 677 (895)
+.+.++|+.|+++| +.++|+||.+...+...++.+++. .-++.+++
T Consensus 85 ~g~~~~l~~L~~~g----~~~~i~S~~~~~~~~~~l~~~gl~-~~f~~i~~ 130 (214)
T PRK13288 85 ETVYETLKTLKKQG----YKLGIVTTKMRDTVEMGLKLTGLD-EFFDVVIT 130 (214)
T ss_pred cCHHHHHHHHHHCC----CeEEEEeCCCHHHHHHHHHHcCCh-hceeEEEe
Confidence 45788999999886 999999999999999999999984 12344444
No 369
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=56.20 E-value=34 Score=35.60 Aligned_cols=50 Identities=18% Similarity=0.272 Sum_probs=38.9
Q ss_pred eecCCCChHHHHHHHHHHh---CCCcccEEEEeCcCCCccccccccCcceEEEEc
Q 002665 791 VIPVLASRSQALRYLHVRW---GIDLSNVVVIAGECGDTDYEGLLGGVHKTVILK 842 (895)
Q Consensus 791 I~p~g~sKg~al~~L~~~l---gi~~~~viafgGD~nn~D~~~Ml~~ag~gVaMg 842 (895)
--|.+.-||..|+.+.+.. |++-++++- +||+.| |+-.+++--..-++|.
T Consensus 144 ~C~~NmCK~~il~~~~~~~~~~g~~~~rviY-iGDG~n-D~Cp~~~L~~~D~v~~ 196 (234)
T PF06888_consen 144 LCPPNMCKGKILERLLQEQAQRGVPYDRVIY-IGDGRN-DFCPALRLRPRDVVFP 196 (234)
T ss_pred cCCCccchHHHHHHHHHHHhhcCCCcceEEE-ECCCCC-CcCcccccCCCCEEec
Confidence 3467788999999888874 777777777 888888 8777877666677775
No 370
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=55.84 E-value=9.1 Score=39.28 Aligned_cols=41 Identities=12% Similarity=0.050 Sum_probs=31.8
Q ss_pred hHHHHHHHHHHh-CCCcccEEEEeCcCC-CccccccccCcceEEEE
Q 002665 798 RSQALRYLHVRW-GIDLSNVVVIAGECG-DTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 798 Kg~al~~L~~~l-gi~~~~viafgGD~n-n~D~~~Ml~~ag~gVaM 841 (895)
+...++..++++ |+++++++. +||+- . | +..=+.+|+..+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~v~-igD~~~~-d-i~~A~~~G~~~i~ 196 (224)
T TIGR02254 154 DKEIFNYALERMPKFSKEEVLM-IGDSLTA-D-IKGGQNAGLDTCW 196 (224)
T ss_pred CHHHHHHHHHHhcCCCchheEE-ECCCcHH-H-HHHHHHCCCcEEE
Confidence 456678999999 999999988 77764 4 5 8888888875444
No 371
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=55.52 E-value=21 Score=36.22 Aligned_cols=45 Identities=20% Similarity=0.132 Sum_probs=36.1
Q ss_pred HHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEe
Q 002665 628 IIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFIC 677 (895)
Q Consensus 628 ~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~ 677 (895)
...++|+.|+++| +.++|+|+.+...+..+++.+++. ..+|.++|
T Consensus 89 g~~~~L~~l~~~g----~~~~i~S~~~~~~~~~~l~~~~l~-~~f~~~~~ 133 (213)
T TIGR01449 89 GVEATLGALRAKG----LRLGLVTNKPTPLARPLLELLGLA-KYFSVLIG 133 (213)
T ss_pred CHHHHHHHHHHCC----CeEEEEeCCCHHHHHHHHHHcCcH-hhCcEEEe
Confidence 4688888998886 999999999999999999999873 22455554
No 372
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=53.95 E-value=37 Score=31.52 Aligned_cols=40 Identities=15% Similarity=0.052 Sum_probs=32.6
Q ss_pred ChHHHHHHHHHHh-CCCcccEEEEeCc-CCCccccccccCcceEE
Q 002665 797 SRSQALRYLHVRW-GIDLSNVVVIAGE-CGDTDYEGLLGGVHKTV 839 (895)
Q Consensus 797 sKg~al~~L~~~l-gi~~~~viafgGD-~nn~D~~~Ml~~ag~gV 839 (895)
.|...++++++++ ++++++++. +|| ... | +.+-+.+|.-.
T Consensus 86 P~~~~~~~~~~~~~~~~~~~~v~-IGD~~~~-D-i~~A~~~Gi~~ 127 (132)
T TIGR01662 86 PKPGMFLEALKRFNEIDPEESVY-VGDQDLT-D-LQAAKRAGLAF 127 (132)
T ss_pred CChHHHHHHHHHcCCCChhheEE-EcCCCcc-c-HHHHHHCCCeE
Confidence 3678999999999 599999998 677 565 7 99888888643
No 373
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=53.94 E-value=17 Score=35.45 Aligned_cols=44 Identities=18% Similarity=0.060 Sum_probs=36.0
Q ss_pred CChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEEc
Q 002665 796 ASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILK 842 (895)
Q Consensus 796 ~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaMg 842 (895)
--|...+..+++++++++++++. +||+.+ | +++-+.+|+..+.=
T Consensus 103 KP~~~~~~~~~~~~~~~~~e~l~-IGD~~~-D-i~~A~~aGi~~i~~ 146 (161)
T TIGR01261 103 KPKIKLLEPYLKKNLIDKARSYV-IGDRET-D-MQLAENLGIRGIQY 146 (161)
T ss_pred CCCHHHHHHHHHHcCCCHHHeEE-EeCCHH-H-HHHHHHCCCeEEEE
Confidence 34567789999999999999999 777776 8 99999999766553
No 374
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=53.56 E-value=17 Score=36.93 Aligned_cols=39 Identities=21% Similarity=0.234 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCC
Q 002665 626 LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 668 (895)
Q Consensus 626 ~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~ 668 (895)
.+.+.++|+.|+++| +.++|+||.+...+...++.+++.
T Consensus 77 ~~g~~~~L~~L~~~g----~~~~i~Sn~~~~~~~~~l~~~~l~ 115 (205)
T TIGR01454 77 FPGVPELLAELRADG----VGTAIATGKSGPRARSLLEALGLL 115 (205)
T ss_pred CCCHHHHHHHHHHCC----CeEEEEeCCchHHHHHHHHHcCCh
Confidence 345788899999886 999999999999999999998883
No 375
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=53.16 E-value=12 Score=38.36 Aligned_cols=44 Identities=5% Similarity=-0.032 Sum_probs=36.3
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEEcC
Q 002665 797 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKG 843 (895)
Q Consensus 797 sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaMgN 843 (895)
-+...+...++++|+++++++. +||+.. | ++.=+.+|..++.-+
T Consensus 143 P~p~~~~~a~~~~~~~p~~~l~-igDs~~-d-i~aA~~aG~~~i~~~ 186 (221)
T PRK10563 143 PDPALMFHAAEAMNVNVENCIL-VDDSSA-G-AQSGIAAGMEVFYFC 186 (221)
T ss_pred CChHHHHHHHHHcCCCHHHeEE-EeCcHh-h-HHHHHHCCCEEEEEC
Confidence 3567889999999999999988 777776 7 888888998887553
No 376
>PHA02597 30.2 hypothetical protein; Provisional
Probab=53.04 E-value=6.7 Score=39.56 Aligned_cols=40 Identities=13% Similarity=0.110 Sum_probs=29.7
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCc--ceEEEE
Q 002665 797 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGV--HKTVIL 841 (895)
Q Consensus 797 sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~a--g~gVaM 841 (895)
.|-..+.++++++| +++++. +||+-+ | +..=+.+ |+.++-
T Consensus 131 ~kp~~~~~a~~~~~--~~~~v~-vgDs~~-d-i~aA~~a~~Gi~~i~ 172 (197)
T PHA02597 131 SKEKLFIKAKEKYG--DRVVCF-VDDLAH-N-LDAAHEALSQLPVIH 172 (197)
T ss_pred ccHHHHHHHHHHhC--CCcEEE-eCCCHH-H-HHHHHHHHcCCcEEE
Confidence 46778899999999 555555 888887 7 8877777 865443
No 377
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=52.88 E-value=14 Score=36.72 Aligned_cols=36 Identities=14% Similarity=0.140 Sum_probs=31.2
Q ss_pred HHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 628 IIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 628 ~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
.+.++++.|++.| +.++|+|+.....+..+++.+++
T Consensus 76 g~~~ll~~l~~~g----~~~~i~S~~~~~~~~~~l~~~~l 111 (188)
T TIGR01489 76 GFKEFIAFIKEHG----IDFIVISDGNDFFIDPVLEGIGE 111 (188)
T ss_pred cHHHHHHHHHHcC----CcEEEEeCCcHHHHHHHHHHcCC
Confidence 4677888888876 89999999999999999999887
No 378
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=52.88 E-value=11 Score=43.93 Aligned_cols=39 Identities=13% Similarity=0.183 Sum_probs=29.8
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEE
Q 002665 797 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVI 840 (895)
Q Consensus 797 sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVa 840 (895)
.|-..+...+++++ ++++++ +||+.+ | +.+-+.+|..++
T Consensus 386 ~kP~~~~~al~~l~--~~~~v~-VGDs~~-D-i~aAk~AG~~~I 424 (459)
T PRK06698 386 NKSDLVKSILNKYD--IKEAAV-VGDRLS-D-INAAKDNGLIAI 424 (459)
T ss_pred CCcHHHHHHHHhcC--cceEEE-EeCCHH-H-HHHHHHCCCeEE
Confidence 46667788888765 578888 777777 8 999999997544
No 379
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=52.44 E-value=13 Score=38.79 Aligned_cols=30 Identities=17% Similarity=0.073 Sum_probs=0.0
Q ss_pred cccEEEEEEecCCCChhhHHHHHHHHHHHh
Q 002665 608 RRKYVFVIAADCDTTSDFLEIIKKVVEAAG 637 (895)
Q Consensus 608 ~~~kli~~DiDGTL~~~~~~~~~~~l~~l~ 637 (895)
...|.|+||+||||....+-.....-+.++
T Consensus 8 ~~~k~iiFDlDGTL~D~~~~~~~a~~~~~~ 37 (238)
T PRK10748 8 GRISALTFDLDDTLYDNRPVILRTEQEALA 37 (238)
T ss_pred CCceeEEEcCcccccCChHHHHHHHHHHHH
No 380
>PRK09449 dUMP phosphatase; Provisional
Probab=52.33 E-value=12 Score=38.61 Aligned_cols=41 Identities=15% Similarity=-0.044 Sum_probs=30.2
Q ss_pred hHHHHHHHHHHhCCCc-ccEEEEeCcCC-CccccccccCcceEEEE
Q 002665 798 RSQALRYLHVRWGIDL-SNVVVIAGECG-DTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 798 Kg~al~~L~~~lgi~~-~~viafgGD~n-n~D~~~Ml~~ag~gVaM 841 (895)
+-....++++++|+.+ ++++. +||+. + | +..=+.+|...+.
T Consensus 152 ~p~~~~~~~~~~~~~~~~~~~~-vgD~~~~-D-i~~A~~aG~~~i~ 194 (224)
T PRK09449 152 DVAIFDYALEQMGNPDRSRVLM-VGDNLHS-D-ILGGINAGIDTCW 194 (224)
T ss_pred CHHHHHHHHHHcCCCCcccEEE-EcCCcHH-H-HHHHHHCCCcEEE
Confidence 3457789999999854 67777 77774 4 6 8888888876544
No 381
>COG1887 TagB Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [Cell envelope biogenesis, outer membrane]
Probab=52.14 E-value=2.8e+02 Score=31.39 Aligned_cols=168 Identities=14% Similarity=0.105 Sum_probs=90.3
Q ss_pred ccCCCCCcEEEEEeCCCCCC---C---HHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCC
Q 002665 310 FFSNPRKPMILALARPDPKK---N---ITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDL 383 (895)
Q Consensus 310 ~~~~~~~~~Il~vgrl~~~K---g---i~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l 383 (895)
+..+.++++|+|.-...+.. | ....+... ++.+.-...+.++|+=-.+.... .+ ......
T Consensus 202 ~~~~~~k~vIlyaPTfr~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~ii~k~Hp~is~----------~~---~~~~~~ 267 (388)
T COG1887 202 LPLPQDKKVILYAPTFRDNDVLIGTQFFNLDIDIE-KLKEKLGENEYVIIVKPHPLISD----------KI---DKRYAL 267 (388)
T ss_pred cCCcccCceEEecCCccCCccccchhhhhhhhhHH-HHHHhhccCCeEEEEecChhhhh----------hh---hhhhhc
Confidence 33456799999999888775 2 22222222 22222232455566654442211 01 111111
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCC-C--------CcccccccCCceE
Q 002665 384 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN-G--------GPVDIHRVLDNGL 454 (895)
Q Consensus 384 ~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~-g--------g~~eiv~~~~~g~ 454 (895)
.+-+...-. ..++..+|..+ |++| .-++-+..|+|..-.||+--.. + -..+. +....|-
T Consensus 268 ~~~~~~vs~--~~di~dll~~s----DiLI-----TDySSv~fdf~~l~KPiify~~D~~~y~~~rg~~~d~-~~~~Pg~ 335 (388)
T COG1887 268 DDFVLDVSD--NADINDLLLVS----DILI-----TDYSSVIFDFMLLDKPIIFYTYDLEQYDELRGFYLDY-KFEAPGE 335 (388)
T ss_pred cceeEeccc--chhHHHHHhhh----CEEE-----eechHHHHHHHHhcCcEEEEecChHHHHhhhhhhhhH-HhcCCcc
Confidence 111221111 37999999999 9987 4689999999999999998532 1 11111 1122344
Q ss_pred EeCCCCHHHHHHHHHHHhhCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Q 002665 455 LVDPHDQQSIADALLKLVSDKQLWERCRQNGLKNIHQFSWPEHCKSYLSRI 505 (895)
Q Consensus 455 lv~p~d~~~la~ai~~ll~~~~~~~~~~~~~~~~v~~~s~~~~a~~~~~~l 505 (895)
++. +..++.++|.....+++...+..+.-.+....+.=....+++.+.+
T Consensus 336 ~~~--~~~~li~ai~~~~~~~~~~~~k~~~~~~~~~~~~dg~ss~ri~~~i 384 (388)
T COG1887 336 VVE--TQEELIDAIKPYDEDGNYDLEKLRVFNDKFNSYEDGRSSERILKLI 384 (388)
T ss_pred ccc--cHHHHHHHHHhhhcccchhHHHHHHHHHhhcccccccHHHHHHHHH
Confidence 443 7788999998888754443333333333332333344445554443
No 382
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=51.07 E-value=97 Score=34.06 Aligned_cols=106 Identities=16% Similarity=0.122 Sum_probs=59.5
Q ss_pred cCCCCCcEE-EEEeC-CCCCCCHH--HHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCC
Q 002665 311 FSNPRKPMI-LALAR-PDPKKNIT--TLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQ 386 (895)
Q Consensus 311 ~~~~~~~~I-l~vgr-l~~~Kgi~--~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~ 386 (895)
...+++++| +..|. ....|... ...+....+.+ ...++ +++|+..+.+ ...++... .. ...
T Consensus 169 ~~~~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~--~~~~i-vl~G~~~e~~--------~~~~i~~~---~~-~~~ 233 (334)
T TIGR02195 169 GLDTERPIIAFCPGAEFGPAKRWPHEHYAELAKRLID--QGYQV-VLFGSAKDHP--------AGNEIEAL---LP-GEL 233 (334)
T ss_pred CCCCCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHH--CCCEE-EEEEChhhHH--------HHHHHHHh---CC-ccc
Confidence 333444544 55554 33556444 56666665532 22344 4556544321 12223221 11 123
Q ss_pred EEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCC
Q 002665 387 VAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN 440 (895)
Q Consensus 387 v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~ 440 (895)
+.+.|..+..++.++++.| |++|-. |. ..+-=|.|.|+|+|+=..
T Consensus 234 ~~l~g~~sL~el~ali~~a----~l~I~~---DS--Gp~HlAaA~~~P~i~lfG 278 (334)
T TIGR02195 234 RNLAGETSLDEAVDLIALA----KAVVTN---DS--GLMHVAAALNRPLVALYG 278 (334)
T ss_pred ccCCCCCCHHHHHHHHHhC----CEEEee---CC--HHHHHHHHcCCCEEEEEC
Confidence 4577888889999999999 999854 32 334457788999998543
No 383
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=49.84 E-value=14 Score=37.50 Aligned_cols=41 Identities=22% Similarity=0.302 Sum_probs=30.5
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCc-ceE-EEE
Q 002665 797 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGV-HKT-VIL 841 (895)
Q Consensus 797 sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~a-g~g-VaM 841 (895)
-|+.-++-+|+.-+++-. .++ .||+-. | .+||+.+ |.| +|+
T Consensus 191 ~ka~i~e~~~ele~~d~s-a~~-VGDSIt-D-v~ml~~~rgrGglAv 233 (315)
T COG4030 191 EKAKIMEGYCELEGIDFS-AVV-VGDSIT-D-VKMLEAARGRGGLAV 233 (315)
T ss_pred chhHHHHHHHhhcCCCcc-eeE-ecCccc-c-hHHHHHhhccCceEE
Confidence 467777889998888877 555 788876 8 9999976 444 444
No 384
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=49.65 E-value=26 Score=35.13 Aligned_cols=37 Identities=3% Similarity=-0.051 Sum_probs=33.2
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 627 EIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 627 ~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
+...++++.|+++| +.++|+||.....+..+++.+|+
T Consensus 83 ~g~~e~l~~l~~~g----~~~~IvS~~~~~~~~~~l~~~g~ 119 (201)
T TIGR01491 83 DYAEELVRWLKEKG----LKTAIVSGGIMCLAKKVAEKLNP 119 (201)
T ss_pred ccHHHHHHHHHHCC----CEEEEEeCCcHHHHHHHHHHhCC
Confidence 45788899999886 99999999999999999999987
No 385
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=49.61 E-value=17 Score=35.16 Aligned_cols=48 Identities=19% Similarity=0.243 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeC
Q 002665 626 LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICN 678 (895)
Q Consensus 626 ~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 678 (895)
.+.+.++|+.|+++| +.++++|+.+...+...++.+++. ..+|.++++
T Consensus 79 ~~~~~~~L~~l~~~~----~~~~i~Sn~~~~~~~~~l~~~~~~-~~f~~i~~~ 126 (176)
T PF13419_consen 79 YPGVRELLERLKAKG----IPLVIVSNGSRERIERVLERLGLD-DYFDEIISS 126 (176)
T ss_dssp STTHHHHHHHHHHTT----SEEEEEESSEHHHHHHHHHHTTHG-GGCSEEEEG
T ss_pred hhhhhhhhhhccccc----ceeEEeecCCcccccccccccccc-ccccccccc
Confidence 345788999998876 999999999999999999999874 235655553
No 386
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=49.57 E-value=21 Score=37.54 Aligned_cols=47 Identities=13% Similarity=-0.027 Sum_probs=36.4
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCC-CCEEEeC
Q 002665 627 EIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLA-FDAFICN 678 (895)
Q Consensus 627 ~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~-~d~~I~~ 678 (895)
+...++|+.|+++| +.++|+||.+...+..+++.+++. .- +|.+||+
T Consensus 102 pg~~e~L~~L~~~g----~~l~IvT~~~~~~~~~~l~~~gl~-~~f~d~ii~~ 149 (253)
T TIGR01422 102 PGVIEVIAYLRARG----IKIGSTTGYTREMMDVVAPEAALQ-GYRPDYNVTT 149 (253)
T ss_pred CCHHHHHHHHHHCC----CeEEEECCCcHHHHHHHHHHHHhc-CCCCceEEcc
Confidence 35678889998886 999999999999999999888773 11 2555553
No 387
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=49.46 E-value=77 Score=33.79 Aligned_cols=100 Identities=17% Similarity=0.187 Sum_probs=57.7
Q ss_pred EEEEEeCCCCCC--CHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCC
Q 002665 318 MILALARPDPKK--NITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQ 395 (895)
Q Consensus 318 ~Il~vgrl~~~K--gi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~ 395 (895)
+++..|.-...| ..+...+..+.+.+. ..++ +++|+.++.+ ....+ .+.++-...+.+.+..+.
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~~--~~~i-vl~g~~~e~~--------~~~~i---~~~~~~~~~~~~~~~~~l 189 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLAR--GARV-VLTGGPAERE--------LAEEI---AAALGGPRVVNLAGKTSL 189 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHHC--CCEE-EEEechhhHH--------HHHHH---HHhcCCCccccCcCCCCH
Confidence 444555444444 345777777777532 3444 3445433211 12222 232222234556777778
Q ss_pred CcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCC
Q 002665 396 SDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN 440 (895)
Q Consensus 396 ~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~ 440 (895)
.|+.++++.| |+++-+ |. | .+-=|.|.|+|+|+-..
T Consensus 190 ~e~~~li~~~----~l~I~~---Ds-g-~~HlA~a~~~p~i~l~g 225 (279)
T cd03789 190 RELAALLARA----DLVVTN---DS-G-PMHLAAALGTPTVALFG 225 (279)
T ss_pred HHHHHHHHhC----CEEEee---CC-H-HHHHHHHcCCCEEEEEC
Confidence 8999999999 999865 32 3 33444699999998654
No 388
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=49.37 E-value=11 Score=38.13 Aligned_cols=42 Identities=10% Similarity=0.084 Sum_probs=34.9
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEE
Q 002665 797 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 797 sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaM 841 (895)
-|...++.+++++|+++++++. +||+.+ | +++-+.+|..++.
T Consensus 132 P~~~~~~~~~~~~~~~~~~~l~-igD~~~-D-i~aA~~~Gi~~i~ 173 (205)
T TIGR01454 132 PAPDIVREALRLLDVPPEDAVM-VGDAVT-D-LASARAAGTATVA 173 (205)
T ss_pred CChHHHHHHHHHcCCChhheEE-EcCCHH-H-HHHHHHcCCeEEE
Confidence 3678889999999999999998 777766 7 9999999986543
No 389
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=49.11 E-value=20 Score=36.63 Aligned_cols=47 Identities=15% Similarity=0.070 Sum_probs=37.0
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeC
Q 002665 627 EIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICN 678 (895)
Q Consensus 627 ~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 678 (895)
+.+.++|+.|+++| +.++|+|+.+...+...++.+++. .-+|.++++
T Consensus 97 ~g~~~~L~~L~~~g----~~~~i~Tn~~~~~~~~~l~~~~l~-~~f~~i~~~ 143 (221)
T TIGR02253 97 PGVRDTLMELRESG----YRLGIITDGLPVKQWEKLERLGVR-DFFDAVITS 143 (221)
T ss_pred CCHHHHHHHHHHCC----CEEEEEeCCchHHHHHHHHhCChH-HhccEEEEe
Confidence 35788899999886 999999999988888899999884 224555553
No 390
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=48.61 E-value=22 Score=36.46 Aligned_cols=38 Identities=18% Similarity=0.133 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 626 LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 626 ~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
.+...++|+.|+++| +.++|+||.+...+...++.+++
T Consensus 89 ~~G~~~~L~~L~~~g----~~~~ivT~~~~~~~~~~l~~~~l 126 (220)
T TIGR03351 89 LPGAEEAFRSLRSSG----IKVALTTGFDRDTAERLLEKLGW 126 (220)
T ss_pred CCCHHHHHHHHHHCC----CEEEEEeCCchHHHHHHHHHhhh
Confidence 345788999999886 99999999999999999999887
No 391
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=48.51 E-value=26 Score=36.02 Aligned_cols=48 Identities=19% Similarity=0.209 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeC
Q 002665 626 LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICN 678 (895)
Q Consensus 626 ~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 678 (895)
.+.+.++++.|+++| +.++|+||.+...+..+++.+++. ..++.++++
T Consensus 94 ~~g~~~~l~~l~~~g----~~~~i~S~~~~~~~~~~l~~~~l~-~~f~~~~~~ 141 (222)
T PRK10826 94 LPGVREALALCKAQG----LKIGLASASPLHMLEAVLTMFDLR-DYFDALASA 141 (222)
T ss_pred CCCHHHHHHHHHHCC----CeEEEEeCCcHHHHHHHHHhCcch-hcccEEEEc
Confidence 345788899999987 999999999999999999999874 234555554
No 392
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=47.73 E-value=3.7e+02 Score=28.48 Aligned_cols=87 Identities=11% Similarity=0.045 Sum_probs=54.5
Q ss_pred HHHHHcCCCC--CEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCC--CCChHHHHHHHcCCCEEEcCCCCcccccccCC
Q 002665 376 KLIDKYDLYG--QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIE--PFGLTLIEAAAYGLPIVATKNGGPVDIHRVLD 451 (895)
Q Consensus 376 ~~~~~~~l~~--~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~e--g~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~ 451 (895)
..+.++|+.+ .+.+.|.++.+.=.++++.. ..|++|-=-..+ |+--++--|..+|+|||.=..+... .
T Consensus 165 ~~~~~~G~~~~~iia~~gPfs~e~n~al~~~~--~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~~------~ 236 (256)
T TIGR00715 165 AQALKLGFPSDRIIAMRGPFSEELEKALLREY--RIDAVVTKASGEQGGELEKVKAAEALGINVIRIARPQTI------P 236 (256)
T ss_pred HHHHHcCCChhcEEEEeCCCCHHHHHHHHHHc--CCCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCCC------C
Confidence 4567777754 56677887777777888877 235544322222 3334666777889999997776421 1
Q ss_pred ceEEeCCCCHHHHHHHHHHHh
Q 002665 452 NGLLVDPHDQQSIADALLKLV 472 (895)
Q Consensus 452 ~g~lv~p~d~~~la~ai~~ll 472 (895)
....+ .+.+++.+.+.+++
T Consensus 237 ~~~~~--~~~~el~~~l~~~~ 255 (256)
T TIGR00715 237 GVAIF--DDISQLNQFVARLL 255 (256)
T ss_pred CCccC--CCHHHHHHHHHHhc
Confidence 11233 38888887777654
No 393
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=47.52 E-value=26 Score=37.21 Aligned_cols=47 Identities=15% Similarity=0.153 Sum_probs=38.6
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeC
Q 002665 627 EIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICN 678 (895)
Q Consensus 627 ~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 678 (895)
+.+.++|+.|+++| +.++|+|+.+...+..+++.+++. ..+|.++++
T Consensus 112 pg~~e~L~~L~~~g----~~l~I~Tn~~~~~~~~~l~~~gl~-~~Fd~ii~~ 158 (260)
T PLN03243 112 PGSREFVQALKKHE----IPIAVASTRPRRYLERAIEAVGME-GFFSVVLAA 158 (260)
T ss_pred CCHHHHHHHHHHCC----CEEEEEeCcCHHHHHHHHHHcCCH-hhCcEEEec
Confidence 35788999999886 999999999999999999999884 235667664
No 394
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=47.21 E-value=36 Score=34.21 Aligned_cols=39 Identities=13% Similarity=0.126 Sum_probs=34.2
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 625 FLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 625 ~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
..+...+.++.++++| +.++|+||-+...+..+++.+++
T Consensus 88 ~~~~~~~~l~~l~~~g----~~v~ivS~s~~~~v~~~~~~lg~ 126 (202)
T TIGR01490 88 LYPEARDLIRWHKAEG----HTIVLVSASLTILVKPLARILGI 126 (202)
T ss_pred ccHHHHHHHHHHHHCC----CEEEEEeCCcHHHHHHHHHHcCC
Confidence 4557788888888876 89999999999999999999998
No 395
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=46.99 E-value=1.2e+02 Score=33.19 Aligned_cols=48 Identities=13% Similarity=-0.028 Sum_probs=36.4
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCC
Q 002665 385 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNG 441 (895)
Q Consensus 385 ~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~g 441 (895)
+.+.+.|..+-.|+.++++.| |++|-. | ...+-=|.|+|+|+|+-..+
T Consensus 234 ~~~~l~g~~sL~elaali~~a----~l~I~n---D--SGp~HlA~A~g~p~valfGp 281 (322)
T PRK10964 234 PYVEVLPKLSLEQVARVLAGA----KAVVSV---D--TGLSHLTAALDRPNITLYGP 281 (322)
T ss_pred CcceecCCCCHHHHHHHHHhC----CEEEec---C--CcHHHHHHHhCCCEEEEECC
Confidence 346677888889999999999 999854 2 23445578899999996543
No 396
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=46.35 E-value=30 Score=33.07 Aligned_cols=42 Identities=17% Similarity=0.151 Sum_probs=33.5
Q ss_pred CChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEE
Q 002665 796 ASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVI 840 (895)
Q Consensus 796 ~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVa 840 (895)
=-|...++.+++++|+++++++. +||+.. | +++=+.+|+..+
T Consensus 101 KP~~~~~~~~~~~~~~~~~e~i~-IGDs~~-D-i~~A~~~Gi~~v 142 (147)
T TIGR01656 101 KPKPGLILEALKRLGVDASRSLV-VGDRLR-D-LQAARNAGLAAV 142 (147)
T ss_pred CCCHHHHHHHHHHcCCChHHEEE-EcCCHH-H-HHHHHHCCCCEE
Confidence 35677889999999999999998 777765 7 887777776544
No 397
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=46.22 E-value=12 Score=38.48 Aligned_cols=35 Identities=17% Similarity=0.127 Sum_probs=25.2
Q ss_pred HHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 628 IIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 628 ~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
...++++.++++| +.++|+||-....+.++++.+ +
T Consensus 78 G~~e~l~~l~~~g----~~~~IvS~~~~~~i~~il~~~-~ 112 (219)
T PRK09552 78 GFHEFVQFVKENN----IPFYVVSGGMDFFVYPLLQGL-I 112 (219)
T ss_pred CHHHHHHHHHHcC----CeEEEECCCcHHHHHHHHHHh-C
Confidence 4566777777765 777777777777777777776 5
No 398
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=46.21 E-value=15 Score=36.47 Aligned_cols=27 Identities=11% Similarity=0.080 Sum_probs=0.0
Q ss_pred EEEEEecCCCChhhHHHHHHHHHHHhc
Q 002665 612 VFVIAADCDTTSDFLEIIKKVVEAAGK 638 (895)
Q Consensus 612 li~~DiDGTL~~~~~~~~~~~l~~l~~ 638 (895)
+|+||+||||...........-+.+++
T Consensus 2 ~viFDlDGTL~ds~~~~~~~~~~~~~~ 28 (184)
T TIGR01993 2 VWFFDLDNTLYPHSAGIFLQIDRNITE 28 (184)
T ss_pred eEEEeCCCCCCCCcccHHHHHHHHHHH
No 399
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=45.92 E-value=1.2e+02 Score=31.63 Aligned_cols=105 Identities=11% Similarity=0.130 Sum_probs=55.9
Q ss_pred CCCcEEEEEeCCCCCCCHHH--HHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCC
Q 002665 314 PRKPMILALARPDPKKNITT--LVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPK 391 (895)
Q Consensus 314 ~~~~~Il~vgrl~~~Kgi~~--ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g 391 (895)
.+..+++..|.-...|.... ..+.+..+.+.. .++ +++|+..+. ..+.... ..+... .+.+.+.+
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~--~~v-vl~g~~~~~------~~~~~~~---~~~~~~-~~~~~~~~ 170 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERG--YRV-VLLGGPEEQ------EKEIADQ---IAAGLQ-NPVINLAG 170 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT---EE-EE--SSHHH------HHHHHHH---HHTTHT-TTTEEETT
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhC--ceE-EEEccchHH------HHHHHHH---HHHhcc-cceEeecC
Confidence 34456677776667776544 666666664322 333 455554321 0111112 222111 12688888
Q ss_pred CCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCC
Q 002665 392 HHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN 440 (895)
Q Consensus 392 ~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~ 440 (895)
..+..|+.++.+.| |++|-+ | ...+-=|.|.|+|+|+=..
T Consensus 171 ~~~l~e~~ali~~a----~~~I~~---D--tg~~HlA~a~~~p~v~lfg 210 (247)
T PF01075_consen 171 KTSLRELAALISRA----DLVIGN---D--TGPMHLAAALGTPTVALFG 210 (247)
T ss_dssp TS-HHHHHHHHHTS----SEEEEE---S--SHHHHHHHHTT--EEEEES
T ss_pred CCCHHHHHHHHhcC----CEEEec---C--ChHHHHHHHHhCCEEEEec
Confidence 88889999999999 999865 2 3445557889999999653
No 400
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=45.34 E-value=27 Score=39.16 Aligned_cols=47 Identities=15% Similarity=0.095 Sum_probs=38.4
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeC
Q 002665 627 EIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICN 678 (895)
Q Consensus 627 ~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 678 (895)
+...++|+.|+++| +.++|+|+.+...+..+++.+++. .-+|.+++.
T Consensus 219 pGa~ElL~~Lk~~G----iklaIaSn~~~~~~~~~L~~lgL~-~yFd~Iv~s 265 (381)
T PLN02575 219 TGSQEFVNVLMNYK----IPMALVSTRPRKTLENAIGSIGIR-GFFSVIVAA 265 (381)
T ss_pred cCHHHHHHHHHHCC----CeEEEEeCCCHHHHHHHHHHcCCH-HHceEEEec
Confidence 35688899999886 999999999999999999999874 235666663
No 401
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=45.02 E-value=37 Score=34.81 Aligned_cols=39 Identities=15% Similarity=0.112 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCC
Q 002665 626 LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 668 (895)
Q Consensus 626 ~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~ 668 (895)
.+...++++.|++.| +.++|+||.....+..+++.+++.
T Consensus 95 ~~g~~~~l~~l~~~g----~~~~i~S~~~~~~~~~~l~~~~l~ 133 (226)
T PRK13222 95 YPGVKETLAALKAAG----YPLAVVTNKPTPFVAPLLEALGIA 133 (226)
T ss_pred CCCHHHHHHHHHHCC----CeEEEEeCCCHHHHHHHHHHcCCc
Confidence 346788899999876 999999999999999999998883
No 402
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=44.97 E-value=30 Score=34.79 Aligned_cols=47 Identities=19% Similarity=0.194 Sum_probs=37.2
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeC
Q 002665 627 EIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICN 678 (895)
Q Consensus 627 ~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 678 (895)
+.+.++|+.|+++| +.++|+|+-+...+...++.+|+. ..+|.++++
T Consensus 95 ~~~~~~L~~L~~~g----~~~~i~Sn~~~~~~~~~l~~~gl~-~~fd~i~~s 141 (198)
T TIGR01428 95 PDVPAGLRALKERG----YRLAILSNGSPAMLKSLVKHAGLD-DPFDAVLSA 141 (198)
T ss_pred CCHHHHHHHHHHCC----CeEEEEeCCCHHHHHHHHHHCCCh-hhhheeEeh
Confidence 35678899999886 999999999999999999999873 234666554
No 403
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=44.34 E-value=36 Score=35.47 Aligned_cols=40 Identities=13% Similarity=0.212 Sum_probs=30.9
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCC
Q 002665 627 EIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 668 (895)
Q Consensus 627 ~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~ 668 (895)
+..+++++.+.++. .++.++|.|-=.-..+..+|+..|+.
T Consensus 74 pgm~~~l~~l~~~~--~~~~~~IiSDaNs~fI~~iL~~~gl~ 113 (234)
T PF06888_consen 74 PGMKELLRFLAKNQ--RGFDLIIISDANSFFIETILEHHGLR 113 (234)
T ss_pred ccHHHHHHHHHhcC--CCceEEEEeCCcHhHHHHHHHhCCCc
Confidence 35678888885432 45889999988888999999998883
No 404
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=42.88 E-value=16 Score=37.38 Aligned_cols=41 Identities=15% Similarity=0.116 Sum_probs=34.8
Q ss_pred hHHHHHHHHHHhCCC-cccEEEEeCcCCCccccccccCcceEEEE
Q 002665 798 RSQALRYLHVRWGID-LSNVVVIAGECGDTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 798 Kg~al~~L~~~lgi~-~~~viafgGD~nn~D~~~Ml~~ag~gVaM 841 (895)
+...+..+++++|++ ++++++ +||+.. | +++=+.+|..+++
T Consensus 147 ~p~~~~~a~~~~~~~~~~~~~~-igD~~~-D-i~aa~~aG~~~~i 188 (220)
T TIGR03351 147 APDLILRAMELTGVQDVQSVAV-AGDTPN-D-LEAGINAGAGAVV 188 (220)
T ss_pred CHHHHHHHHHHcCCCChhHeEE-eCCCHH-H-HHHHHHCCCCeEE
Confidence 668899999999997 789988 777776 8 9999999998743
No 405
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=42.48 E-value=25 Score=34.66 Aligned_cols=45 Identities=24% Similarity=0.274 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEe
Q 002665 626 LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFIC 677 (895)
Q Consensus 626 ~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~ 677 (895)
-+...++|+.|+++| +.++++|+. ..+...++.+++. ..+|.+++
T Consensus 90 ~~g~~~~l~~l~~~g----~~i~i~S~~--~~~~~~l~~~~l~-~~f~~v~~ 134 (185)
T TIGR02009 90 LPGIENFLKRLKKKG----IAVGLGSSS--KNADRILAKLGLT-DYFDAIVD 134 (185)
T ss_pred CcCHHHHHHHHHHcC----CeEEEEeCc--hhHHHHHHHcChH-HHCCEeee
Confidence 345788899998886 899999998 6677888888873 12455554
No 406
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=42.14 E-value=33 Score=36.67 Aligned_cols=47 Identities=15% Similarity=0.058 Sum_probs=36.6
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeC
Q 002665 627 EIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICN 678 (895)
Q Consensus 627 ~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 678 (895)
+.+.++|+.|+++| +.++|+||.+...+...++.+++. ..++.++|+
T Consensus 104 ~g~~e~L~~Lk~~g----~~l~ivTn~~~~~~~~~l~~~~i~-~~f~~i~~~ 150 (272)
T PRK13223 104 PGVRDTLKWLKKQG----VEMALITNKPERFVAPLLDQMKIG-RYFRWIIGG 150 (272)
T ss_pred CCHHHHHHHHHHCC----CeEEEEECCcHHHHHHHHHHcCcH-hhCeEEEec
Confidence 45788899998886 999999999999899999988873 124555554
No 407
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=41.23 E-value=30 Score=35.19 Aligned_cols=53 Identities=15% Similarity=0.215 Sum_probs=43.8
Q ss_pred eEEeecCCCChHHHHHHHHHHh---CCCcccEEEEeCcCCCccccccccCcceEEEEc
Q 002665 788 KLHVIPVLASRSQALRYLHVRW---GIDLSNVVVIAGECGDTDYEGLLGGVHKTVILK 842 (895)
Q Consensus 788 ~lEI~p~g~sKg~al~~L~~~l---gi~~~~viafgGD~nn~D~~~Ml~~ag~gVaMg 842 (895)
.-...|++.-||.-|..+.... |+..+.++- .||++| |+-.|+.-.+.-|||.
T Consensus 154 sC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iY-vGDG~n-D~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 154 SCNLCPSNMCKGLVLDELVASQLKDGVRYERLIY-VGDGAN-DFCPVLRLRACDVAMP 209 (256)
T ss_pred ccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEE-EcCCCC-CcCcchhcccCceecc
Confidence 3466899999999997765443 888888887 888889 9889999999999995
No 408
>COG2047 Uncharacterized protein (ATP-grasp superfamily) [General function prediction only]
Probab=40.95 E-value=3.3e+02 Score=27.92 Aligned_cols=144 Identities=15% Similarity=0.102 Sum_probs=79.3
Q ss_pred CCCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCC
Q 002665 314 PRKPMILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPK 391 (895)
Q Consensus 314 ~~~~~Il~vgrl~--~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g 391 (895)
..+.+|+-+|... ..-|...+..++-.+.+... .+..+-+|+-+- .+ +......+|
T Consensus 82 ~~~Dliil~Gd~Q~~~~~gqyel~~~~Ld~a~e~g-~~~IyTLGGy~v-------------------Gk--l~eep~VlG 139 (258)
T COG2047 82 GERDLIILVGDTQATSSEGQYELTGKILDIAKEFG-ARMIYTLGGYGV-------------------GK--LVEEPRVLG 139 (258)
T ss_pred CCCcEEEEeccccccCcchhHHHHHHHHHHHHHcC-CcEEEEecCccc-------------------Cc--ccCCceeEE
Confidence 3445666666543 34566666555544432222 233344554321 11 222345578
Q ss_pred CCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcc-cccccCCceEEeCCCCHHHHHHHHHH
Q 002665 392 HHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPV-DIHRVLDNGLLVDPHDQQSIADALLK 470 (895)
Q Consensus 392 ~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~gg~~-eiv~~~~~g~lv~p~d~~~la~ai~~ 470 (895)
.++..++.+.+... +|.+ ++---|-|++= |+|+.+=....-|+. --+--...|+++||....++-+.+.+
T Consensus 140 A~ts~eLi~~lke~----gV~f-r~~epgGgIVG----asGLllg~g~l~gm~gaCLMGeT~GY~vDpkaAkaVL~vl~k 210 (258)
T COG2047 140 AVTSKELIEELKEH----GVEF-RSGEPGGGIVG----ASGLLLGFGELRGMDGACLMGETPGYLVDPKAAKAVLEVLCK 210 (258)
T ss_pred ecCCHHHHHHHHHc----CeEe-ccCCCCCceec----hhhhhhhhhhhcCCCceeeccCCCccccChHHHHHHHHHHHH
Confidence 88889999999999 8854 44333334442 334333222211111 11122357999999999999999999
Q ss_pred Hhh---CHHHHHHHHHHHHHH
Q 002665 471 LVS---DKQLWERCRQNGLKN 488 (895)
Q Consensus 471 ll~---~~~~~~~~~~~~~~~ 488 (895)
.+. |-+..+.+.+.+.+.
T Consensus 211 ~lgiEid~~~Le~RAke~E~i 231 (258)
T COG2047 211 MLGIEIDMEALEERAKEMEEI 231 (258)
T ss_pred HhCceecHHHHHHHHHHHHHH
Confidence 886 666555555554443
No 409
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=40.44 E-value=35 Score=33.37 Aligned_cols=37 Identities=8% Similarity=0.019 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 627 EIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 627 ~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
+...+.++.++++| +.++|+||.....+.++++.+++
T Consensus 76 ~g~~~~l~~l~~~g----~~~~ivS~~~~~~i~~~~~~~g~ 112 (177)
T TIGR01488 76 PGARELISWLKERG----IDTVIVSGGFDFFVEPVAEKLGI 112 (177)
T ss_pred cCHHHHHHHHHHCC----CEEEEECCCcHHHHHHHHHHcCC
Confidence 35678888888886 99999999999999999999988
No 410
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=39.89 E-value=23 Score=45.10 Aligned_cols=40 Identities=10% Similarity=0.000 Sum_probs=33.1
Q ss_pred hhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 624 DFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 624 ~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
+..+...+.|++|+++| |++-+.||=-.+.+..+.-..++
T Consensus 651 kLQdgVPetI~~L~~AG----IKIWVLTGDK~ETAiNIg~sC~L 690 (1151)
T KOG0206|consen 651 KLQDGVPETIAKLAQAG----IKIWVLTGDKQETAINIGYSCRL 690 (1151)
T ss_pred hhccCchHHHHHHHHcC----CEEEEEcCcHHHHHHHHHHhhcC
Confidence 44455677788888887 99999999999999988877776
No 411
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=39.52 E-value=66 Score=31.50 Aligned_cols=33 Identities=9% Similarity=0.099 Sum_probs=24.0
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHH
Q 002665 625 FLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSL 661 (895)
Q Consensus 625 ~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~ 661 (895)
+.+..++++..-++.| -.+++.|||+...+...
T Consensus 115 PKevA~qLI~MHq~RG----D~i~FvTGRt~gk~d~v 147 (237)
T COG3700 115 PKEVARQLIDMHQRRG----DAIYFVTGRTPGKTDTV 147 (237)
T ss_pred hHHHHHHHHHHHHhcC----CeEEEEecCCCCccccc
Confidence 4566777777766665 67889999988765443
No 412
>PRK11590 hypothetical protein; Provisional
Probab=39.50 E-value=47 Score=33.93 Aligned_cols=46 Identities=7% Similarity=-0.016 Sum_probs=34.0
Q ss_pred HHHHHH-HHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCC
Q 002665 628 IIKKVV-EAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICNS 679 (895)
Q Consensus 628 ~~~~~l-~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~n 679 (895)
...+.| +.+++.| +.++|+|+.+...+.++++.+++. ..+.+||..
T Consensus 99 ga~e~L~~~l~~~G----~~l~IvSas~~~~~~~il~~l~~~--~~~~~i~t~ 145 (211)
T PRK11590 99 VVQERLTTYLLSSD----ADVWLITGSPQPLVEQVYFDTPWL--PRVNLIASQ 145 (211)
T ss_pred cHHHHHHHHHHhCC----CEEEEEeCCcHHHHHHHHHHcccc--ccCceEEEE
Confidence 457777 4566655 999999999999999999998851 234577643
No 413
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=39.17 E-value=30 Score=37.02 Aligned_cols=61 Identities=15% Similarity=0.038 Sum_probs=40.8
Q ss_pred cccEEEEEEecCCC--ChhhHHHHHHHHHHHhccCCCCceEEEEEc--CCCHHH--HHHHHHhCCCC
Q 002665 608 RRKYVFVIAADCDT--TSDFLEIIKKVVEAAGKDNSAGFIGFVLST--ALTILE--LHSLLVSGGLS 668 (895)
Q Consensus 608 ~~~kli~~DiDGTL--~~~~~~~~~~~l~~l~~~g~~~~i~vviaT--GR~~~~--~~~~l~~l~l~ 668 (895)
...--++|||||.| -+...+...++++.|.++..+-.|.|++.| |-..+. ++++-..+++.
T Consensus 33 ~~~fgfafDIDGVL~RG~~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS~~Lgv~ 99 (389)
T KOG1618|consen 33 PPTFGFAFDIDGVLFRGHRPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQELSALLGVE 99 (389)
T ss_pred CCceeEEEecccEEEecCCCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHHHHhhCCc
Confidence 45667999999999 366777778888888887434457777776 333333 33455566664
No 414
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=37.55 E-value=25 Score=34.48 Aligned_cols=29 Identities=7% Similarity=-0.075 Sum_probs=0.0
Q ss_pred EEEEEecCCCChhhHHHHHHHHHHHhccC
Q 002665 612 VFVIAADCDTTSDFLEIIKKVVEAAGKDN 640 (895)
Q Consensus 612 li~~DiDGTL~~~~~~~~~~~l~~l~~~g 640 (895)
.|+||+||||...........-..+.+.+
T Consensus 1 ~viFD~DGTL~D~~~~~~~~~~~~~~~~~ 29 (175)
T TIGR01493 1 AMVFDVYGTLVDVHGGVRACLAAIAPEGG 29 (175)
T ss_pred CeEEecCCcCcccHHHHHHHHHHhhhhhh
No 415
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=37.23 E-value=46 Score=35.63 Aligned_cols=38 Identities=8% Similarity=0.145 Sum_probs=33.6
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCC
Q 002665 627 EIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 668 (895)
Q Consensus 627 ~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~ 668 (895)
+...++|+.|+++| +.++|+|+.+...+..+++.+++.
T Consensus 145 pg~~e~L~~L~~~g----i~laIvSn~~~~~~~~~L~~~gl~ 182 (273)
T PRK13225 145 PGVADLLAQLRSRS----LCLGILSSNSRQNIEAFLQRQGLR 182 (273)
T ss_pred CCHHHHHHHHHHCC----CeEEEEeCCCHHHHHHHHHHcCCh
Confidence 45788899999886 999999999999999999999983
No 416
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=36.90 E-value=51 Score=32.29 Aligned_cols=46 Identities=22% Similarity=0.149 Sum_probs=34.3
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeC
Q 002665 627 EIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICN 678 (895)
Q Consensus 627 ~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 678 (895)
+.+.++++.|+++| +.++|+|+-+... ......+++. ..+|.+|++
T Consensus 88 ~g~~~~l~~l~~~g----~~~~i~Tn~~~~~-~~~~~~~~l~-~~f~~i~~~ 133 (183)
T TIGR01509 88 PGVEPLLEALRARG----KKLALLTNSPRDH-AVLVQELGLR-DLFDVVIFS 133 (183)
T ss_pred cCHHHHHHHHHHCC----CeEEEEeCCchHH-HHHHHhcCCH-HHCCEEEEc
Confidence 45788899999886 8999999998877 5555557763 235677664
No 417
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=36.41 E-value=48 Score=35.21 Aligned_cols=36 Identities=14% Similarity=0.040 Sum_probs=31.0
Q ss_pred HHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 628 IIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 628 ~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
...++|+.|+++| +.++|+||.+...+..+++.+++
T Consensus 105 g~~elL~~L~~~g----~~l~I~T~~~~~~~~~~l~~~~l 140 (267)
T PRK13478 105 GVLEVIAALRARG----IKIGSTTGYTREMMDVVVPLAAA 140 (267)
T ss_pred CHHHHHHHHHHCC----CEEEEEcCCcHHHHHHHHHHHhh
Confidence 4678889999886 99999999999999888887665
No 418
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=36.19 E-value=2.1e+02 Score=31.59 Aligned_cols=104 Identities=13% Similarity=0.115 Sum_probs=58.3
Q ss_pred CcEEEEEeCCCCCCCH--HHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCC
Q 002665 316 KPMILALARPDPKKNI--TTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHH 393 (895)
Q Consensus 316 ~~~Il~vgrl~~~Kgi--~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~ 393 (895)
..+++..|.-...|.. +...+.+..+.. ....+ +++|+..+.+ .+...++. +..+-...+.+.|..
T Consensus 182 ~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~--~~~~i-vl~g~p~~~e------~~~~~~i~---~~~~~~~~~~l~g~~ 249 (344)
T TIGR02201 182 NYIVIQPTSRWFFKCWDNDRFSALIDALHA--RGYEV-VLTSGPDKDE------LAMVNEIA---QGCQTPRVTSLAGKL 249 (344)
T ss_pred CEEEEeCCCCccccCCCHHHHHHHHHHHHh--CCCeE-EEecCCCHHH------HHHHHHHH---hhCCCCcccccCCCC
Confidence 3455666654455543 455555555532 23444 3455432111 11122232 222222345678888
Q ss_pred CCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCC
Q 002665 394 KQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN 440 (895)
Q Consensus 394 ~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~ 440 (895)
+-.|+.++++.| |++|-. | ...+-=|.|.|+|+|+=..
T Consensus 250 sL~el~ali~~a----~l~Vs~---D--SGp~HlAaA~g~p~v~Lfg 287 (344)
T TIGR02201 250 TLPQLAALIDHA----RLFIGV---D--SVPMHMAAALGTPLVALFG 287 (344)
T ss_pred CHHHHHHHHHhC----CEEEec---C--CHHHHHHHHcCCCEEEEEC
Confidence 889999999999 998854 3 3344557889999998553
No 419
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=35.96 E-value=1.2e+02 Score=32.72 Aligned_cols=102 Identities=11% Similarity=0.060 Sum_probs=52.8
Q ss_pred CCCHHHHHHHHHhcccccCCC-cEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhh
Q 002665 328 KKNITTLVKAFGECRPLRELA-NLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAA 406 (895)
Q Consensus 328 ~Kgi~~ll~A~~~l~~~~~~~-~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~ 406 (895)
..-+...++.+.++ .|.. ++.++...... ........+.+.++++++.-... .--+.+++....+...
T Consensus 114 ~~~~~~~l~l~~~l---~P~~k~igvl~~~~~~------~~~~~~~~~~~~a~~~g~~l~~~--~v~~~~~~~~~~~~l~ 182 (294)
T PF04392_consen 114 RPPIEKQLELIKKL---FPDAKRIGVLYDPSEP------NSVAQIEQLRKAAKKLGIELVEI--PVPSSEDLEQALEALA 182 (294)
T ss_dssp ---HHHHHHHHHHH---STT--EEEEEEETT-H------HHHHHHHHHHHHHHHTT-EEEEE--EESSGGGHHHHHHHHC
T ss_pred CcCHHHHHHHHHHh---CCCCCEEEEEecCCCc------cHHHHHHHHHHHHHHcCCEEEEE--ecCcHhHHHHHHHHhh
Confidence 34455666666665 3433 34344443321 11234667777788888743222 2234578888888777
Q ss_pred cCCcEEEecCC---CCCCChHHHHHHHcCCCEEEcCC
Q 002665 407 KTKGVFINPAF---IEPFGLTLIEAAAYGLPIVATKN 440 (895)
Q Consensus 407 ~~~Dv~v~ps~---~eg~gl~~~Ea~a~G~PVvat~~ 440 (895)
...|++++++. ...+...+..+..+++||++...
T Consensus 183 ~~~da~~~~~~~~~~~~~~~i~~~~~~~~iPv~~~~~ 219 (294)
T PF04392_consen 183 EKVDALYLLPDNLVDSNFEAILQLANEAKIPVFGSSD 219 (294)
T ss_dssp TT-SEEEE-S-HHHHHTHHHHHHHCCCTT--EEESSH
T ss_pred ccCCEEEEECCcchHhHHHHHHHHHHhcCCCEEECCH
Confidence 77899888753 22233334455567999999763
No 420
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=35.79 E-value=54 Score=33.92 Aligned_cols=46 Identities=9% Similarity=-0.007 Sum_probs=35.5
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEe
Q 002665 627 EIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFIC 677 (895)
Q Consensus 627 ~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~ 677 (895)
+...++++.|+++| +.++|+|+.+...+...++.+++. ..+|.+++
T Consensus 98 pg~~~~L~~L~~~g----~~l~i~Tn~~~~~~~~~l~~~~l~-~~f~~i~~ 143 (229)
T PRK13226 98 DGVEGMLQRLECAG----CVWGIVTNKPEYLARLILPQLGWE-QRCAVLIG 143 (229)
T ss_pred CCHHHHHHHHHHCC----CeEEEECCCCHHHHHHHHHHcCch-hcccEEEe
Confidence 34677888898886 899999999998888899998873 22455554
No 421
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=35.59 E-value=5.1e+02 Score=26.63 Aligned_cols=47 Identities=15% Similarity=0.269 Sum_probs=35.1
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcC
Q 002665 384 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATK 439 (895)
Q Consensus 384 ~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~ 439 (895)
..........+.+++..+++.| +++|-..++ .++=|+++|+|+|+-.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~----~~~Is~RlH-----~~I~a~~~g~P~i~i~ 283 (286)
T PF04230_consen 237 FNVIIIDYSLSPDELLELISQA----DLVISMRLH-----GAILALSLGVPVIAIS 283 (286)
T ss_pred cceeEecCCCCHHHHHHHHhcC----CEEEecCCH-----HHHHHHHcCCCEEEEe
Confidence 3455666677788999999999 997744322 4567899999999854
No 422
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=35.38 E-value=64 Score=37.89 Aligned_cols=55 Identities=13% Similarity=0.164 Sum_probs=47.4
Q ss_pred ccEEEEEEecCCC------ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 609 RKYVFVIAADCDT------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 609 ~~kli~~DiDGTL------~~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
..+.+++.+|+++ .+...+.+.+++++|++.| +.+++.||.....+..+.+++|+
T Consensus 326 g~~~~~~a~~~~~~g~i~l~d~lr~~~~~~i~~l~~~g----i~~~~ltGD~~~~a~~ia~~lgi 386 (499)
T TIGR01494 326 GLRVLAVASKETLLGLLGLEDPLRDDAKETISELREAG----IRVIMLTGDNVLTAKAIAKELGI 386 (499)
T ss_pred CCEEEEEEECCeEEEEEEecCCCchhHHHHHHHHHHCC----CeEEEEcCCCHHHHHHHHHHcCc
Confidence 4567788889887 4678888999999999986 88999999999999999999875
No 423
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=34.71 E-value=58 Score=32.95 Aligned_cols=37 Identities=19% Similarity=0.192 Sum_probs=28.9
Q ss_pred eEEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcceEEEeeccc
Q 002665 7 NMKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQV 61 (895)
Q Consensus 7 ~~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~~ 61 (895)
|+|++-..-|+ ....+..|+++|++.| |+|.|+++..
T Consensus 1 M~ILlTNDDGi----------------~a~Gi~aL~~~L~~~g--~~V~VvAP~~ 37 (196)
T PF01975_consen 1 MRILLTNDDGI----------------DAPGIRALAKALSALG--HDVVVVAPDS 37 (196)
T ss_dssp SEEEEE-SS-T----------------TSHHHHHHHHHHTTTS--SEEEEEEESS
T ss_pred CeEEEEcCCCC----------------CCHHHHHHHHHHHhcC--CeEEEEeCCC
Confidence 88999887775 3456778999998888 9999999864
No 424
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=34.23 E-value=49 Score=34.16 Aligned_cols=47 Identities=21% Similarity=0.142 Sum_probs=36.4
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeC
Q 002665 627 EIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICN 678 (895)
Q Consensus 627 ~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 678 (895)
+...++|+.|+++| +.++|+|.-+...+...++.+++. ..+|.++++
T Consensus 96 ~g~~e~L~~Lk~~g----~~~~i~Tn~~~~~~~~~l~~~~l~-~~fd~iv~s 142 (224)
T PRK14988 96 EDTVPFLEALKASG----KRRILLTNAHPHNLAVKLEHTGLD-AHLDLLLST 142 (224)
T ss_pred CCHHHHHHHHHhCC----CeEEEEeCcCHHHHHHHHHHCCcH-HHCCEEEEe
Confidence 34678899999987 999999998888888888888873 234666553
No 425
>PRK00207 sulfur transfer complex subunit TusD; Validated
Probab=34.19 E-value=65 Score=30.10 Aligned_cols=39 Identities=13% Similarity=-0.049 Sum_probs=30.1
Q ss_pred eEEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcce-EEEeec
Q 002665 7 NMKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYR-VDLLTR 59 (895)
Q Consensus 7 ~~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~-V~vit~ 59 (895)
|||+++--++ |+.+-..+-.+++|+++.+.| |+ |.||-.
T Consensus 1 m~~~iv~~~~------------Py~~~~~~~al~~A~aa~~~g--h~v~~vFf~ 40 (128)
T PRK00207 1 MRYAIAVTGP------------AYGTQQASSAYQFAQALLAEG--HELVSVFFY 40 (128)
T ss_pred CEEEEEEcCC------------CCCCHHHHHHHHHHHHHHhCC--CCeeEEEEe
Confidence 6777776444 776667789999999999998 98 477754
No 426
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=33.63 E-value=29 Score=40.51 Aligned_cols=43 Identities=14% Similarity=0.212 Sum_probs=32.1
Q ss_pred CCCChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEEcC
Q 002665 794 VLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKG 843 (895)
Q Consensus 794 ~g~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaMgN 843 (895)
.|-.|..+|+ +.+|.+..+ ++ .||+.+ | .+||+.|+.++++..
T Consensus 173 ~Ge~Kv~rl~---~~~g~~~~~-~a-YgDS~s-D-~plL~~a~e~y~V~~ 215 (497)
T PLN02177 173 VGDHKRDAVL---KEFGDALPD-LG-LGDRET-D-HDFMSICKEGYMVPR 215 (497)
T ss_pred ccHHHHHHHH---HHhCCCCce-EE-EECCcc-H-HHHHHhCCccEEeCC
Confidence 3444777776 556766655 66 566666 7 999999999999986
No 427
>KOG2884 consensus 26S proteasome regulatory complex, subunit RPN10/PSMD4 [Posttranslational modification, protein turnover, chaperones]
Probab=33.59 E-value=3.4e+02 Score=27.66 Aligned_cols=113 Identities=19% Similarity=0.241 Sum_probs=56.6
Q ss_pred cEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCC-c-HHHHHHHhh---cCCcEEEecCCCCCCCh
Q 002665 349 NLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQS-D-VPDIYRLAA---KTKGVFINPAFIEPFGL 423 (895)
Q Consensus 349 ~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~-e-l~~ly~~a~---~~~Dv~v~ps~~eg~gl 423 (895)
.+++++|..-...+ .+++... +..++.+..-.+.++|....+ + +.++....- .+..++.+|+ |
T Consensus 109 riVvFvGSpi~e~e-----keLv~~a-krlkk~~Vaidii~FGE~~~~~e~l~~fida~N~~~~gshlv~Vpp-----g- 176 (259)
T KOG2884|consen 109 RIVVFVGSPIEESE-----KELVKLA-KRLKKNKVAIDIINFGEAENNTEKLFEFIDALNGKGDGSHLVSVPP-----G- 176 (259)
T ss_pred EEEEEecCcchhhH-----HHHHHHH-HHHHhcCeeEEEEEeccccccHHHHHHHHHHhcCCCCCceEEEeCC-----C-
Confidence 45556676433222 2233322 334455555456677765443 2 222222220 0012333332 1
Q ss_pred HHHHHHHcCCCEEEcCCCCc-ccccccC-CceEEeCCCCHHHHHHHHHHHhh
Q 002665 424 TLIEAAAYGLPIVATKNGGP-VDIHRVL-DNGLLVDPHDQQSIADALLKLVS 473 (895)
Q Consensus 424 ~~~Ea~a~G~PVvat~~gg~-~eiv~~~-~~g~lv~p~d~~~la~ai~~ll~ 473 (895)
.+++-.-.-.||+..+.|+. .....++ ...+-|+|.+--++|-||+--++
T Consensus 177 ~~L~d~l~ssPii~ge~g~a~~~~~a~g~~f~fgvdp~~DPELAlALRlSME 228 (259)
T KOG2884|consen 177 PLLSDALLSSPIIQGEDGGAAAGLGANGMDFEFGVDPEDDPELALALRLSME 228 (259)
T ss_pred ccHHHHhhcCceeccCcccccccccccccccccCCCcccCHHHHHHHHhhHH
Confidence 25666666789999875443 3333221 23456778877799999885443
No 428
>PRK11587 putative phosphatase; Provisional
Probab=33.42 E-value=56 Score=33.41 Aligned_cols=45 Identities=16% Similarity=0.144 Sum_probs=34.3
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEe
Q 002665 627 EIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFIC 677 (895)
Q Consensus 627 ~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~ 677 (895)
+...++|+.|+++| +.++|+|+.+.......++..++. .++.++|
T Consensus 86 pg~~e~L~~L~~~g----~~~~ivTn~~~~~~~~~l~~~~l~--~~~~i~~ 130 (218)
T PRK11587 86 PGAIALLNHLNKLG----IPWAIVTSGSVPVASARHKAAGLP--APEVFVT 130 (218)
T ss_pred cCHHHHHHHHHHcC----CcEEEEcCCCchHHHHHHHhcCCC--CccEEEE
Confidence 35788899999886 999999998877777777777773 3455544
No 429
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=32.76 E-value=47 Score=32.91 Aligned_cols=38 Identities=8% Similarity=0.075 Sum_probs=32.8
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCC
Q 002665 627 EIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLS 668 (895)
Q Consensus 627 ~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~ 668 (895)
+.+.+.++.++++| +.++|+||-+...+..+++.++++
T Consensus 92 ~~~~e~i~~~~~~~----~~v~IvS~~~~~~i~~~~~~~~i~ 129 (192)
T PF12710_consen 92 PDAMELIRELKDNG----IKVVIVSGSPDEIIEPIAERLGID 129 (192)
T ss_dssp TTHHHHHHHHHHTT----SEEEEEEEEEHHHHHHHHHHTTSS
T ss_pred hhHHHHHHHHHHCC----CEEEEECCCcHHHHHHHHHHcCCC
Confidence 44568888888886 999999999999999999999983
No 430
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=32.49 E-value=69 Score=32.70 Aligned_cols=39 Identities=15% Similarity=0.012 Sum_probs=32.9
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 625 FLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 625 ~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
..+...++++.++++| +.++|+||.....+.++++.++.
T Consensus 71 l~pg~~e~l~~l~~~g----~~~~IvS~~~~~~i~~il~~~~~ 109 (214)
T TIGR03333 71 IREGFREFVAFINEHG----IPFYVISGGMDFFVYPLLEGIVE 109 (214)
T ss_pred ccccHHHHHHHHHHCC----CeEEEECCCcHHHHHHHHHhhCC
Confidence 4456788999998886 99999999999999999988743
No 431
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=32.35 E-value=3e+02 Score=28.72 Aligned_cols=110 Identities=11% Similarity=0.040 Sum_probs=68.1
Q ss_pred cEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEE--ecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCC
Q 002665 317 PMILALARPDPKKNITTLVKAFGECRPLRELANLTLIM--GNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHK 394 (895)
Q Consensus 317 ~~Il~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~liv--G~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~ 394 (895)
.++++-+++...-=++.....+..+.. ..+++.+|= +...++ +.+.....+.+.+++.. +..+..
T Consensus 3 ~ll~s~~~~~~~~~l~~~~~~~~~~~~--~~~~v~fIPtAs~~~~~-------~~y~~~~~~af~~lG~~--v~~l~~-- 69 (233)
T PRK05282 3 LLLLSNSTLPGTGYLEHALPLIAELLA--GRRKAVFIPYAGVTQSW-------DDYTAKVAEALAPLGIE--VTGIHR-- 69 (233)
T ss_pred EEEEecCCCCCCchHHHHHHHHHHHHc--CCCeEEEECCCCCCCCH-------HHHHHHHHHHHHHCCCE--EEEecc--
Confidence 356777777664444666666666643 445664432 222222 34567777888888875 333322
Q ss_pred CCcHHHHHHHhhcCCcEEEecCC----------CCCCChHHHHHHHcCCCEEEcCCCCc
Q 002665 395 QSDVPDIYRLAAKTKGVFINPAF----------IEPFGLTLIEAAAYGLPIVATKNGGP 443 (895)
Q Consensus 395 ~~el~~ly~~a~~~~Dv~v~ps~----------~eg~gl~~~Ea~a~G~PVvat~~gg~ 443 (895)
.++..+.+..| |+++++-= ..++--.+.|+...|+|++.+.+|++
T Consensus 70 ~~d~~~~l~~a----d~I~v~GGnt~~l~~~l~~~gl~~~l~~~~~~G~~~~G~SAGAi 124 (233)
T PRK05282 70 VADPVAAIENA----EAIFVGGGNTFQLLKQLYERGLLAPIREAVKNGTPYIGWSAGAN 124 (233)
T ss_pred chhhHHHHhcC----CEEEECCccHHHHHHHHHHCCcHHHHHHHHHCCCEEEEECHHHH
Confidence 25667788888 98877611 11222346789999999999999874
No 432
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=32.35 E-value=27 Score=34.65 Aligned_cols=38 Identities=21% Similarity=0.161 Sum_probs=32.1
Q ss_pred HHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEE
Q 002665 799 SQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTV 839 (895)
Q Consensus 799 g~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gV 839 (895)
...+..+++++|+++++++. +||+.+ | +.+-+.+|..+
T Consensus 106 p~~~~~~~~~l~~~~~~~~~-VgDs~~-D-i~~A~~aG~~~ 143 (181)
T PRK08942 106 PGMLLSIAERLNIDLAGSPM-VGDSLR-D-LQAAAAAGVTP 143 (181)
T ss_pred HHHHHHHHHHcCCChhhEEE-EeCCHH-H-HHHHHHCCCeE
Confidence 56778899999999999999 777776 8 99999999753
No 433
>PF03308 ArgK: ArgK protein; InterPro: IPR005129 Bacterial periplasmic transport systems require the function of a specific substrate-binding protein, located in the periplasm, and several cytoplasmic membrane transport components. In Escherichia coli, the arginine-ornithine transport system requires an arginine-ornithine-binding protein and the lysine-arginine-ornithine (LAO) transport system includes a LAO-binding protein. Both periplasmic proteins can be phosphorylated by a single kinase, ArgK [] resulting in reduced levels of transport activity of the periplasmic transport systems that include each of the binding proteins. The ArgK protein acts as an ATPase enzyme and as a kinase.; PDB: 3MD0_A 3P32_A 2QM7_A 2QM8_A 2WWW_D 2P67_A 3NXS_A.
Probab=32.34 E-value=6.2e+02 Score=26.88 Aligned_cols=114 Identities=15% Similarity=0.119 Sum_probs=64.2
Q ss_pred chhhHHHHHHHHHhcCCCcceEEEeeccccCCCCCCCCCccccccccccchhhhcccCCCCCcEEEEecCCCCCcccccc
Q 002665 33 GQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWTYAEPSEMLNRKNTENLMQGLGESSGAYIIRIPFGPKDKYVQKE 112 (895)
Q Consensus 33 G~~~~v~~La~~L~~~g~~~~V~vit~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~g~~i~r~~~~~~~~~l~k~ 112 (895)
|-.+.+..|.+.|.++| +.|-|++-.++.|.....-=.....+ ++....+++.|.-.++...
T Consensus 41 GKSTli~~l~~~~~~~g--~~VaVlAVDPSSp~tGGAlLGDRiRM---------~~~~~d~~vfIRS~atRG~------- 102 (266)
T PF03308_consen 41 GKSTLIDALIRELRERG--KRVAVLAVDPSSPFTGGALLGDRIRM---------QELSRDPGVFIRSMATRGS------- 102 (266)
T ss_dssp SHHHHHHHHHHHHHHTT----EEEEEE-GGGGCC---SS--GGGC---------HHHHTSTTEEEEEE---SS-------
T ss_pred cHHHHHHHHHHHHhhcC--CceEEEEECCCCCCCCCcccccHHHh---------cCcCCCCCEEEeecCcCCC-------
Confidence 67789999999999999 99999998766554322111111112 2222335777766665332
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHhhhhcCCCCCCCCcEEEeccCCchHHHHHHhccCCCCEEEEeCCC
Q 002665 113 LLWPHIPEFVDAALTHIIQISKVLGEQVGSGQPIWPVAIHGHYADAGDAAALLSGALNVPMVFTGHSL 180 (895)
Q Consensus 113 ~~~~~l~~f~~~~~~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~~~~~~~~~~ip~v~t~H~~ 180 (895)
+ ..+.+........+.. .-+|+|....--.|-.-.-++..-.+-+++..=+.
T Consensus 103 -----l----GGls~~t~~~v~ll~a-------aG~D~IiiETVGvGQsE~~I~~~aD~~v~v~~Pg~ 154 (266)
T PF03308_consen 103 -----L----GGLSRATRDAVRLLDA-------AGFDVIIIETVGVGQSEVDIADMADTVVLVLVPGL 154 (266)
T ss_dssp -----H----HHHHHHHHHHHHHHHH-------TT-SEEEEEEESSSTHHHHHHTTSSEEEEEEESST
T ss_pred -----C----CCccHhHHHHHHHHHH-------cCCCEEEEeCCCCCccHHHHHHhcCeEEEEecCCC
Confidence 2 2233333333334443 45999999987777777777776676666665554
No 434
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=31.86 E-value=26 Score=33.82 Aligned_cols=41 Identities=17% Similarity=0.199 Sum_probs=33.2
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEE
Q 002665 797 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVI 840 (895)
Q Consensus 797 sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVa 840 (895)
.+....+.+++.+|+++++++. +||+.. | +.+=+.+|...+
T Consensus 134 p~~~~~~~~~~~~~~~p~~~~~-vgD~~~-d-~~~A~~~G~~~i 174 (176)
T PF13419_consen 134 PDPDAYRRALEKLGIPPEEILF-VGDSPS-D-VEAAKEAGIKTI 174 (176)
T ss_dssp TSHHHHHHHHHHHTSSGGGEEE-EESSHH-H-HHHHHHTTSEEE
T ss_pred hHHHHHHHHHHHcCCCcceEEE-EeCCHH-H-HHHHHHcCCeEE
Confidence 4568899999999999999988 666665 7 988888886543
No 435
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=31.78 E-value=27 Score=41.00 Aligned_cols=39 Identities=18% Similarity=0.320 Sum_probs=29.7
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEEc
Q 002665 797 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILK 842 (895)
Q Consensus 797 sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaMg 842 (895)
.|..-++.+.+. | ..+++.||+-| | ..||+.++.||+|+
T Consensus 394 ~K~~~v~~l~~~-g----~~v~~vGDg~n-D-~~al~~Advgia~~ 432 (499)
T TIGR01494 394 EKAALVEALQKK-G----RVVAMTGDGVN-D-APALKKADVGIAMG 432 (499)
T ss_pred HHHHHHHHHHHC-C----CEEEEECCChh-h-HHHHHhCCCccccc
Confidence 577666666432 2 34555888888 8 99999999999998
No 436
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=31.59 E-value=84 Score=34.79 Aligned_cols=37 Identities=8% Similarity=-0.136 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhC-C
Q 002665 626 LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSG-G 666 (895)
Q Consensus 626 ~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l-~ 666 (895)
.+.+.++|++|+++| ++++|+|.-+...+..+++.+ +
T Consensus 186 ~pgl~elL~~Lr~~G----~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 186 DPKLPLFLSKLKEHG----KKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred chhHHHHHHHHHHCC----CeEEEEeCCCHHHHHHHHHHhhC
Confidence 557899999999987 999999999999999999986 5
No 437
>COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]
Probab=31.34 E-value=8.8e+02 Score=28.11 Aligned_cols=68 Identities=18% Similarity=0.228 Sum_probs=48.3
Q ss_pred cEEEecCC-CCCCChHHHHHHHc---CCCEEE-cCCCCcc---cccccCCceEEeCCCCHHHHHHHHHHHhhCHHH
Q 002665 410 GVFINPAF-IEPFGLTLIEAAAY---GLPIVA-TKNGGPV---DIHRVLDNGLLVDPHDQQSIADALLKLVSDKQL 477 (895)
Q Consensus 410 Dv~v~ps~-~eg~gl~~~Ea~a~---G~PVva-t~~gg~~---eiv~~~~~g~lv~p~d~~~la~ai~~ll~~~~~ 477 (895)
|+++.--+ -+.-|+.+++.+.. ++|||. |..|... +-+..|-.-++..|-+++.+...+.++++....
T Consensus 50 ~lvl~Di~mp~~~Gl~ll~~i~~~~~~~pVI~~Tg~g~i~~AV~A~k~GA~Dfl~KP~~~~~L~~~v~ral~~~~~ 125 (464)
T COG2204 50 DLVLLDIRMPGMDGLELLKEIKSRDPDLPVIVMTGHGDIDTAVEALRLGAFDFLEKPFDLDRLLAIVERALELREL 125 (464)
T ss_pred CEEEEecCCCCCchHHHHHHHHhhCCCCCEEEEeCCCCHHHHHHHHhcCcceeeeCCCCHHHHHHHHHHHHHHhhh
Confidence 66665443 34456888777766 799877 5566533 344456667899999999999999999985543
No 438
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=31.09 E-value=1.1e+02 Score=37.82 Aligned_cols=56 Identities=14% Similarity=0.050 Sum_probs=50.2
Q ss_pred cccEEEEEEecCCC------ChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 608 RRKYVFVIAADCDT------TSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 608 ~~~kli~~DiDGTL------~~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
..+-.+.+.+||+| .....+....+++.|++.| +++++.||-....++...+++|+
T Consensus 701 ~g~tvv~v~vn~~l~gv~~l~D~vr~~a~~av~~Lk~~G----i~v~mLTGDn~~aA~svA~~VGi 762 (951)
T KOG0207|consen 701 KGQTVVYVAVNGQLVGVFALEDQVRPDAALAVAELKSMG----IKVVMLTGDNDAAARSVAQQVGI 762 (951)
T ss_pred cCceEEEEEECCEEEEEEEeccccchhHHHHHHHHHhcC----ceEEEEcCCCHHHHHHHHHhhCc
Confidence 45667889999999 3677888899999999997 99999999999999999999997
No 439
>cd01020 TroA_b Metal binding protein TroA_b. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=30.79 E-value=2.7e+02 Score=29.56 Aligned_cols=88 Identities=17% Similarity=0.174 Sum_probs=55.5
Q ss_pred HHHHHHHhhcCCcEEEecCC-CCCCChHHHHHHHcCCCEEEcCCCCcccccccCCceEEeCCCCHHHHHHHHHHHhh--C
Q 002665 398 VPDIYRLAAKTKGVFINPAF-IEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVS--D 474 (895)
Q Consensus 398 l~~ly~~a~~~~Dv~v~ps~-~eg~gl~~~Ea~a~G~PVvat~~gg~~eiv~~~~~g~lv~p~d~~~la~ai~~ll~--~ 474 (895)
-..-++.| |++|.--. .|++=-.+++.. .+.+++....++..+ -...+.-+..+|.+...++.+|.+.|. |
T Consensus 46 d~~~l~~A----Dliv~~G~~lE~~~~k~~~~~-~~~~v~~~~~~~~~~-~~~~dPH~Wldp~n~~~~a~~I~~~L~~~d 119 (264)
T cd01020 46 DAAKVSTA----DIVVYNGGGYDPWMTKLLADT-KDVIVIAADLDGHDD-KEGDNPHLWYDPETMSKVANALADALVKAD 119 (264)
T ss_pred HHHHHhhC----CEEEEeCCCchHHHHHHHHhc-CCceEEeeecccccC-CCCCCCceecCHhHHHHHHHHHHHHHHHhC
Confidence 33445556 78776432 344333444433 355666544333211 011245678889999999999999997 8
Q ss_pred HHHHHHHHHHHHHHHhh
Q 002665 475 KQLWERCRQNGLKNIHQ 491 (895)
Q Consensus 475 ~~~~~~~~~~~~~~v~~ 491 (895)
|+....+.+|+.++.++
T Consensus 120 P~~~~~y~~N~~~~~~~ 136 (264)
T cd01020 120 PDNKKYYQANAKKFVAS 136 (264)
T ss_pred cccHHHHHHHHHHHHHH
Confidence 99888899999888754
No 440
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=30.66 E-value=56 Score=37.91 Aligned_cols=47 Identities=9% Similarity=0.016 Sum_probs=38.0
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeC
Q 002665 627 EIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICN 678 (895)
Q Consensus 627 ~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 678 (895)
+.+.++|+.|+++| +.++|+|+.+...+...++.+++. ..+|.+++.
T Consensus 333 pG~~e~L~~Lk~~g----~~l~IvS~~~~~~~~~~l~~~~l~-~~f~~i~~~ 379 (459)
T PRK06698 333 PNVKEIFTYIKENN----CSIYIASNGLTEYLRAIVSYYDLD-QWVTETFSI 379 (459)
T ss_pred CCHHHHHHHHHHCC----CeEEEEeCCchHHHHHHHHHCCcH-hhcceeEec
Confidence 45788899998886 999999999999999999999873 234666653
No 441
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=30.35 E-value=2.1e+02 Score=28.73 Aligned_cols=27 Identities=19% Similarity=0.145 Sum_probs=20.2
Q ss_pred EEEeccCCchHHHHHHhccCCCCEEEE
Q 002665 150 AIHGHYADAGDAAALLSGALNVPMVFT 176 (895)
Q Consensus 150 vIh~h~~~~~~~~~~~~~~~~ip~v~t 176 (895)
++.+-....|+.|.+++.+.++|.|..
T Consensus 61 ~~liGSSlGG~~A~~La~~~~~~avLi 87 (187)
T PF05728_consen 61 VVLIGSSLGGFYATYLAERYGLPAVLI 87 (187)
T ss_pred eEEEEEChHHHHHHHHHHHhCCCEEEE
Confidence 444444568889999999999998665
No 442
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=29.99 E-value=76 Score=30.15 Aligned_cols=34 Identities=9% Similarity=0.013 Sum_probs=29.3
Q ss_pred HHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhC
Q 002665 628 IIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSG 665 (895)
Q Consensus 628 ~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l 665 (895)
.+.++++.|+++| ++++|+|+++...+..+++.+
T Consensus 68 g~~e~l~~L~~~g----~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 68 GAADLLKRLKEAG----IKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred CHHHHHHHHHHCc----CeEEEEeCCchHHHHHHHHHH
Confidence 3688889998876 999999999999998888875
No 443
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=29.00 E-value=81 Score=32.17 Aligned_cols=51 Identities=18% Similarity=0.062 Sum_probs=32.9
Q ss_pred EeecCCCChHHHHHHHHHHhCCC-cccEEEEeCcCCCccccccccCcce-EEEEcCch
Q 002665 790 HVIPVLASRSQALRYLHVRWGID-LSNVVVIAGECGDTDYEGLLGGVHK-TVILKGVG 845 (895)
Q Consensus 790 EI~p~g~sKg~al~~L~~~lgi~-~~~viafgGD~nn~D~~~Ml~~ag~-gVaMgNA~ 845 (895)
+++-+--. .|.+...+..||+ +.+++. +||+.+ . +.-=+..|+ +|.+|-..
T Consensus 156 ~~vcKP~~--~afE~a~k~agi~~p~~t~F-fDDS~~-N-I~~ak~vGl~tvlv~~~~ 208 (244)
T KOG3109|consen 156 TVVCKPSE--EAFEKAMKVAGIDSPRNTYF-FDDSER-N-IQTAKEVGLKTVLVGREH 208 (244)
T ss_pred ceeecCCH--HHHHHHHHHhCCCCcCceEE-EcCchh-h-HHHHHhccceeEEEEeee
Confidence 34444333 4677888889998 889877 777654 4 665556664 55665444
No 444
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=28.44 E-value=1.3e+02 Score=34.95 Aligned_cols=30 Identities=33% Similarity=0.273 Sum_probs=26.6
Q ss_pred CCCchhhHHHHHHHHHhc---------CCCcceEEEeeccc
Q 002665 30 DTGGQVKYVVELARALGS---------MPGVYRVDLLTRQV 61 (895)
Q Consensus 30 ~~GG~~~~v~~La~~L~~---------~g~~~~V~vit~~~ 61 (895)
..||.++-+.+.+..|.. .| ++|.+++...
T Consensus 45 ~~gg~er~~v~~~~~l~s~~~~lg~~d~G--~qV~~l~~h~ 83 (495)
T KOG0853|consen 45 GIGGAERLVVDAAVHLLSGQDVLGLPDTG--GQVVYLTSHE 83 (495)
T ss_pred ccCchHHHhHHHHHHHHhcccccCCCCCC--ceEEEEehhh
Confidence 378999999999999999 99 9999999874
No 445
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=28.11 E-value=2.4e+02 Score=31.21 Aligned_cols=45 Identities=13% Similarity=0.082 Sum_probs=33.8
Q ss_pred EEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHHHcCCCEEEcCC
Q 002665 387 VAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKN 440 (895)
Q Consensus 387 v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~G~PVvat~~ 440 (895)
+.+.|..+-.++.++++.| +++|-. |. ..+-=|.|.|+|+|+=..
T Consensus 244 ~~l~g~~sL~el~ali~~a----~l~I~n---DT--Gp~HlAaA~g~P~valfG 288 (348)
T PRK10916 244 RNLAGETQLEQAVILIAAC----KAIVTN---DS--GLMHVAAALNRPLVALYG 288 (348)
T ss_pred eeccCCCCHHHHHHHHHhC----CEEEec---CC--hHHHHHHHhCCCEEEEEC
Confidence 5567887889999999999 998853 32 234447788999998543
No 446
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=28.05 E-value=1e+02 Score=31.50 Aligned_cols=46 Identities=7% Similarity=0.070 Sum_probs=33.3
Q ss_pred HHHHHHHH-HHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeC
Q 002665 627 EIIKKVVE-AAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICN 678 (895)
Q Consensus 627 ~~~~~~l~-~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 678 (895)
+...+.|+ .++++| +.++|+|+-+...++++.+..++ ...+.+||.
T Consensus 97 pga~e~L~~~l~~~G----~~v~IvSas~~~~~~~ia~~~~~--~~~~~~i~t 143 (210)
T TIGR01545 97 PLVAERLRQYLESSD----ADIWLITGSPQPLVEAVYFDSNF--IHRLNLIAS 143 (210)
T ss_pred ccHHHHHHHHHHhCC----CEEEEEcCCcHHHHHHHHHhccc--cccCcEEEE
Confidence 35677775 566665 99999999999999999988655 112456643
No 447
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=27.94 E-value=80 Score=31.43 Aligned_cols=33 Identities=9% Similarity=-0.014 Sum_probs=25.7
Q ss_pred eEEEEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcceEEEeecc
Q 002665 7 NMKYLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQ 60 (895)
Q Consensus 7 ~~i~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~ 60 (895)
|||++|+--|. ... ++++...++| |+|+-+++.
T Consensus 1 mKIaiIgAsG~----------------~Gs---~i~~EA~~RG--HeVTAivRn 33 (211)
T COG2910 1 MKIAIIGASGK----------------AGS---RILKEALKRG--HEVTAIVRN 33 (211)
T ss_pred CeEEEEecCch----------------hHH---HHHHHHHhCC--CeeEEEEeC
Confidence 89999986543 232 4777888899 999999997
No 448
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=27.72 E-value=1.4e+02 Score=30.62 Aligned_cols=49 Identities=18% Similarity=0.295 Sum_probs=33.7
Q ss_pred cccEEEEEEecCCCC--------------hhh-------------HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHH
Q 002665 608 RRKYVFVIAADCDTT--------------SDF-------------LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHS 660 (895)
Q Consensus 608 ~~~kli~~DiDGTL~--------------~~~-------------~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~ 660 (895)
.++.|++||+|-|+. ... .+-..+.++.|+++ |+...++.+
T Consensus 11 ~~ril~~FDFD~TIid~dSD~wVv~~lp~~~l~~qL~~t~p~~~Wne~M~rv~k~Lheq------------gv~~~~ik~ 78 (256)
T KOG3120|consen 11 SPRILLVFDFDRTIIDQDSDNWVVDELPTTDLFNQLRDTYPKGFWNELMDRVFKELHEQ------------GVRIAEIKQ 78 (256)
T ss_pred CCcEEEEEecCceeecCCcchHHHHhcccchhHHHHHHhcccchHHHHHHHHHHHHHHc------------CCCHHHHHH
Confidence 578999999999991 111 12233455566665 567788888
Q ss_pred HHHhCCCC
Q 002665 661 LLVSGGLS 668 (895)
Q Consensus 661 ~l~~l~l~ 668 (895)
.++.+++.
T Consensus 79 ~~r~iP~~ 86 (256)
T KOG3120|consen 79 VLRSIPIV 86 (256)
T ss_pred HHhcCCCC
Confidence 88888773
No 449
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=27.54 E-value=42 Score=39.23 Aligned_cols=18 Identities=11% Similarity=-0.051 Sum_probs=14.5
Q ss_pred cccEEEEEEecCCCChhh
Q 002665 608 RRKYVFVIAADCDTTSDF 625 (895)
Q Consensus 608 ~~~kli~~DiDGTL~~~~ 625 (895)
...+.++||+||||+.+.
T Consensus 20 ~~~~~~~FDfDGTLt~~~ 37 (497)
T PLN02177 20 RSNQTVAADLDGTLLISR 37 (497)
T ss_pred ccccEEEEecCCcccCCC
Confidence 557789999999997543
No 450
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=27.25 E-value=7.5e+02 Score=26.11 Aligned_cols=39 Identities=13% Similarity=0.145 Sum_probs=31.9
Q ss_pred ceEEeCCCCHHHHHHHHHHHhh--CHHHHHHHHHHHHHHHh
Q 002665 452 NGLLVDPHDQQSIADALLKLVS--DKQLWERCRQNGLKNIH 490 (895)
Q Consensus 452 ~g~lv~p~d~~~la~ai~~ll~--~~~~~~~~~~~~~~~v~ 490 (895)
.-+..+|.+...++++|.+.|. +|+....+.+|+.++.+
T Consensus 112 PH~Wldp~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~ 152 (266)
T cd01018 112 PHIWLSPANAKIMAENIYEALAELDPQNATYYQANLDALLA 152 (266)
T ss_pred CccCcCHHHHHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH
Confidence 4566788888999999999997 88888888888887763
No 451
>PRK05632 phosphate acetyltransferase; Reviewed
Probab=27.24 E-value=3.9e+02 Score=32.86 Aligned_cols=26 Identities=23% Similarity=0.250 Sum_probs=21.5
Q ss_pred CchhhHHHHHHHHHhcCCCcceEEEeec
Q 002665 32 GGQVKYVVELARALGSMPGVYRVDLLTR 59 (895)
Q Consensus 32 GG~~~~v~~La~~L~~~g~~~~V~vit~ 59 (895)
-|-.....-|++.|.++| .+|-.+=+
T Consensus 14 ~GKT~vslgL~~~L~~~G--~~Vg~fKP 39 (684)
T PRK05632 14 VGLTSVSLGLMRALERKG--VKVGFFKP 39 (684)
T ss_pred CCHHHHHHHHHHHHHhCC--CeEEEeCC
Confidence 366778899999999999 88888843
No 452
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=27.05 E-value=61 Score=33.43 Aligned_cols=44 Identities=2% Similarity=-0.059 Sum_probs=35.5
Q ss_pred HHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceE--EEEcCch
Q 002665 799 SQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKT--VILKGVG 845 (895)
Q Consensus 799 g~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~g--VaMgNA~ 845 (895)
.....++++++|++++++++ +||+-. | +..=+.+|.. +++.|..
T Consensus 152 p~~~~~~~~~~~~~p~~~l~-igDs~~-d-i~aA~~aG~~~~~~v~~~~ 197 (224)
T PRK14988 152 QRLWQAVAEHTGLKAERTLF-IDDSEP-I-LDAAAQFGIRYCLGVTNPD 197 (224)
T ss_pred HHHHHHHHHHcCCChHHEEE-EcCCHH-H-HHHHHHcCCeEEEEEeCCC
Confidence 56789999999999999998 777776 7 8888889985 3456644
No 453
>PLN02940 riboflavin kinase
Probab=27.00 E-value=69 Score=36.16 Aligned_cols=48 Identities=6% Similarity=0.169 Sum_probs=37.1
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHH-hCCCCCCCCCEEEeCC
Q 002665 627 EIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLV-SGGLSPLAFDAFICNS 679 (895)
Q Consensus 627 ~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~-~l~l~~~~~d~~I~~n 679 (895)
+.+.++|+.|+++| +.++|+|+.+...+...++ ..++. ..+|.++|+.
T Consensus 96 pGv~elL~~Lk~~g----~~l~IvTn~~~~~~~~~l~~~~gl~-~~Fd~ii~~d 144 (382)
T PLN02940 96 PGANRLIKHLKSHG----VPMALASNSPRANIEAKISCHQGWK-ESFSVIVGGD 144 (382)
T ss_pred cCHHHHHHHHHHCC----CcEEEEeCCcHHHHHHHHHhccChH-hhCCEEEehh
Confidence 45688899999886 9999999999999888886 56663 2357777744
No 454
>COG0757 AroQ 3-dehydroquinate dehydratase II [Amino acid transport and metabolism]
Probab=26.81 E-value=2.2e+02 Score=26.83 Aligned_cols=69 Identities=17% Similarity=0.275 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcC-CcEEEecCCCCCCChHHHHHHHc-CCCEEEc
Q 002665 368 AALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKT-KGVFINPAFIEPFGLTLIEAAAY-GLPIVAT 438 (895)
Q Consensus 368 ~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~~-~Dv~v~ps~~eg~gl~~~Ea~a~-G~PVvat 438 (895)
+++...+.....+++. .+.|..+=..-++.++...|..+ .+++++|.-+.-.+..+..|++. .+|+|=-
T Consensus 28 ~di~~~~~~~a~~~g~--~v~~~QSN~Eg~Lid~Ihea~~~~~~IvINpga~THTSvAlrDAi~av~iP~vEV 98 (146)
T COG0757 28 EDIEADLEEEAAKLGV--EVEFRQSNHEGELIDWIHEARGKAGDIVINPGAYTHTSVALRDAIAAVSIPVVEV 98 (146)
T ss_pred HHHHHHHHHHHHHcCc--eEEEEecCchHHHHHHHHHhhccCCeEEEcCccchhhHHHHHHHHHhcCCCEEEE
Confidence 4456667777777776 45555554456788898888765 34999998878888999999876 8999753
No 455
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=26.40 E-value=95 Score=31.35 Aligned_cols=59 Identities=14% Similarity=0.067 Sum_probs=42.9
Q ss_pred cccEEEEEEecCCC--ChhhHHHHHHHHHHHhccCCCCceEEEEE-cCCCHHHHHHHHHhCCCC
Q 002665 608 RRKYVFVIAADCDT--TSDFLEIIKKVVEAAGKDNSAGFIGFVLS-TALTILELHSLLVSGGLS 668 (895)
Q Consensus 608 ~~~kli~~DiDGTL--~~~~~~~~~~~l~~l~~~g~~~~i~vvia-TGR~~~~~~~~l~~l~l~ 668 (895)
+.-|-+.+|+-||| .....+...++++.|+.++ -.++|+-. |+-+...+.+-+..+|++
T Consensus 5 ~~v~gvLlDlSGtLh~e~~avpga~eAl~rLr~~~--~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 5 RAVKGVLLDLSGTLHIEDAAVPGAVEALKRLRDQH--VKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred cccceEEEeccceEecccccCCCHHHHHHHHHhcC--ceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 45677899999999 3445667889999999765 34555544 455777777888888885
No 456
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=26.15 E-value=86 Score=33.55 Aligned_cols=39 Identities=13% Similarity=0.106 Sum_probs=34.3
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 625 FLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 625 ~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
+.+...+.++.|+++| +.++|+||=....+..+++++++
T Consensus 122 l~pG~~efl~~L~~~G----Ipv~IvS~G~~~~Ie~vL~~lgl 160 (277)
T TIGR01544 122 LKDGYENFFDKLQQHS----IPVFIFSAGIGNVLEEVLRQAGV 160 (277)
T ss_pred cCcCHHHHHHHHHHCC----CcEEEEeCCcHHHHHHHHHHcCC
Confidence 3446789999999987 99999999999999999999887
No 457
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=26.08 E-value=57 Score=31.94 Aligned_cols=42 Identities=2% Similarity=0.029 Sum_probs=33.2
Q ss_pred CCh--HHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEE
Q 002665 796 ASR--SQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVI 840 (895)
Q Consensus 796 ~sK--g~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVa 840 (895)
..| ....+.+++++|+++++++. +||+.. | +.+=+.+|.-.+
T Consensus 138 ~~KP~~~~~~~~~~~~~~~~~~~~~-vgD~~~-d-i~aA~~~G~~~i 181 (183)
T TIGR01509 138 RGKPDPDIYLLALKKLGLKPEECLF-VDDSPA-G-IEAAKAAGMHTV 181 (183)
T ss_pred CCCCCHHHHHHHHHHcCCCcceEEE-EcCCHH-H-HHHHHHcCCEEE
Confidence 445 66789999999999999988 777776 7 888888887443
No 458
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=26.04 E-value=38 Score=33.39 Aligned_cols=39 Identities=8% Similarity=-0.017 Sum_probs=31.6
Q ss_pred hHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEE
Q 002665 798 RSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTV 839 (895)
Q Consensus 798 Kg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gV 839 (895)
+...++++++++|+++++++. +||+.. | +++=+.+|...
T Consensus 144 ~~~~~~~~~~~~~~~~~~~v~-IgD~~~-d-i~aA~~~G~~~ 182 (185)
T TIGR02009 144 HPETFLLAAELLGVSPNECVV-FEDALA-G-VQAARAAGMFA 182 (185)
T ss_pred ChHHHHHHHHHcCCCHHHeEE-EeCcHh-h-HHHHHHCCCeE
Confidence 345678999999999999998 777776 8 88888887653
No 459
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=26.03 E-value=62 Score=33.12 Aligned_cols=31 Identities=6% Similarity=-0.110 Sum_probs=0.0
Q ss_pred cccEEEEEEecCCCChhhHHHHHHHHHHHhc
Q 002665 608 RRKYVFVIAADCDTTSDFLEIIKKVVEAAGK 638 (895)
Q Consensus 608 ~~~kli~~DiDGTL~~~~~~~~~~~l~~l~~ 638 (895)
...|.|+||+||||....+..-.........
T Consensus 2 ~~~k~i~FD~d~TL~d~~~~~~~~~~~~~~~ 32 (229)
T COG1011 2 MMIKAILFDLDGTLLDFDSAEFRAVLAEFAE 32 (229)
T ss_pred CceeEEEEecCCcccccchHHhHHHHHHHHH
No 460
>PRK13015 3-dehydroquinate dehydratase; Reviewed
Probab=25.69 E-value=1.8e+02 Score=27.69 Aligned_cols=102 Identities=17% Similarity=0.232 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCC-cEEEecCCCCCCChHHHHHHHc-CCCEEEcCCC--Cc
Q 002665 368 AALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTK-GVFINPAFIEPFGLTLIEAAAY-GLPIVATKNG--GP 443 (895)
Q Consensus 368 ~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~-Dv~v~ps~~eg~gl~~~Ea~a~-G~PVvat~~g--g~ 443 (895)
+++...+...++.+++ .+.|..+=..-++.+....|.... .++++|.-+.-.+..+..|++. ++|+|=-... -.
T Consensus 29 ~~i~~~~~~~a~~~g~--~~~~~QSN~EGelId~i~~a~~~~dgiIINpga~THtSiAl~DAl~~~~~P~VEVHiSNi~a 106 (146)
T PRK13015 29 ADVEALCRAAAEALGL--EVEFRQSNHEGELIDWIHEARGDVAGIVINPGAYTHTSVAIRDALAALELPVIEVHISNVHA 106 (146)
T ss_pred HHHHHHHHHHHHHcCC--EEEEEeeCcHHHHHHHHHHhhhcCCEEEEcchHHhhhHHHHHHHHHcCCCCEEEEEcCCccc
Confidence 4456777777777776 466655544557777777764433 4777887666778889999866 9999753221 12
Q ss_pred c------cccccCCceEEeCCCCHHHHHHHHHHHh
Q 002665 444 V------DIHRVLDNGLLVDPHDQQSIADALLKLV 472 (895)
Q Consensus 444 ~------eiv~~~~~g~lv~p~d~~~la~ai~~ll 472 (895)
+ .++.....|.+. -.-.....-||..++
T Consensus 107 RE~fR~~S~is~~~~G~I~-G~G~~gY~lAl~al~ 140 (146)
T PRK13015 107 REAFRHHSYVSAIADGVIC-GLGTEGYRLALRRLA 140 (146)
T ss_pred cccccccccccCceeEEEe-eCCHHHHHHHHHHHH
Confidence 2 244444456554 235566666666655
No 461
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=25.68 E-value=44 Score=38.26 Aligned_cols=44 Identities=18% Similarity=0.283 Sum_probs=0.0
Q ss_pred cEEEEeCcCCCccccccccCcceEEEEcCchhhhHhhhhcCCCCCCCcccCCCC
Q 002665 815 NVVVIAGECGDTDYEGLLGGVHKTVILKGVGESARKLHANRNYSLEDVISFDSH 868 (895)
Q Consensus 815 ~viafgGD~nn~D~~~Ml~~ag~gVaMgNA~~~~~~~~~~~~~~~~~~~~~~~~ 868 (895)
..+|..||+.| | -+-|..|..|+||-++. -..|.+++ +++.||.
T Consensus 510 rlVAMtGDGTN-D-APALAqAdVg~AMNsGT--qAAkEAaN------MVDLDS~ 553 (681)
T COG2216 510 RLVAMTGDGTN-D-APALAQADVGVAMNSGT--QAAKEAAN------MVDLDSN 553 (681)
T ss_pred cEEEEcCCCCC-c-chhhhhcchhhhhcccc--HHHHHhhc------ccccCCC
No 462
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=25.47 E-value=61 Score=30.97 Aligned_cols=34 Identities=21% Similarity=0.061 Sum_probs=24.7
Q ss_pred HHHHHHHhCCCcccEEEEeCcCCCccccccccCcceE
Q 002665 802 LRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKT 838 (895)
Q Consensus 802 l~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~g 838 (895)
+.+.++++|.+++++++ +||+-+ | +.+-..+|+-
T Consensus 104 ~~k~l~~l~~~p~~~i~-i~Ds~~-~-~~aa~~ngI~ 137 (148)
T smart00577 104 YVKDLSLLGRDLSNVII-IDDSPD-S-WPFHPENLIP 137 (148)
T ss_pred EeecHHHcCCChhcEEE-EECCHH-H-hhcCccCEEE
Confidence 56667889999999999 777666 6 6665555443
No 463
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=25.11 E-value=71 Score=39.31 Aligned_cols=49 Identities=12% Similarity=0.207 Sum_probs=39.8
Q ss_pred eEEeecCCCChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEEcCch
Q 002665 788 KLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVG 845 (895)
Q Consensus 788 ~lEI~p~g~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaMgNA~ 845 (895)
+-|++|. .|..=++.|.+.- ..+|+.||+-| | -.-|..|..||+||++.
T Consensus 766 ~aev~P~--~K~~~Ik~lq~~~-----~~VaMVGDGIN-D-aPALA~AdVGIaig~gs 814 (951)
T KOG0207|consen 766 YAEVLPE--QKAEKIKEIQKNG-----GPVAMVGDGIN-D-APALAQADVGIAIGAGS 814 (951)
T ss_pred EeccCch--hhHHHHHHHHhcC-----CcEEEEeCCCC-c-cHHHHhhccceeecccc
Confidence 5677776 6888888887743 35677888888 8 99999999999999776
No 464
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=25.04 E-value=1e+02 Score=31.33 Aligned_cols=45 Identities=16% Similarity=0.065 Sum_probs=34.7
Q ss_pred HHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeC
Q 002665 628 IIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICN 678 (895)
Q Consensus 628 ~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 678 (895)
...++|+.|+++ +.++|+|+.+...+...++.+++. ..+|.++++
T Consensus 101 g~~~~L~~l~~~-----~~~~i~Sn~~~~~~~~~l~~~~l~-~~fd~i~~~ 145 (224)
T TIGR02254 101 GAFELMENLQQK-----FRLYIVTNGVRETQYKRLRKSGLF-PFFDDIFVS 145 (224)
T ss_pred cHHHHHHHHHhc-----CcEEEEeCCchHHHHHHHHHCCcH-hhcCEEEEc
Confidence 467778888775 689999999999999999998884 235666654
No 465
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=24.72 E-value=42 Score=31.97 Aligned_cols=35 Identities=11% Similarity=0.048 Sum_probs=26.6
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCc
Q 002665 797 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGV 835 (895)
Q Consensus 797 sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~a 835 (895)
.+...+.++++++|+++ +++. +||+.. | +.+=+.+
T Consensus 119 p~~~~~~~~~~~~~~~~-~~l~-iGDs~~-D-i~aa~~a 153 (154)
T TIGR01549 119 PEPEIFLAALESLGLPP-EVLH-VGDNLN-D-IEGARNA 153 (154)
T ss_pred cCHHHHHHHHHHcCCCC-CEEE-EeCCHH-H-HHHHHHc
Confidence 46788999999999998 8887 777766 6 6654433
No 466
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=24.45 E-value=1e+02 Score=30.38 Aligned_cols=34 Identities=21% Similarity=0.382 Sum_probs=25.1
Q ss_pred eEEeecCCCChHHHHHHHHHHhCCCcccEEEEeCcCC
Q 002665 788 KLHVIPVLASRSQALRYLHVRWGIDLSNVVVIAGECG 824 (895)
Q Consensus 788 ~lEI~p~g~sKg~al~~L~~~lgi~~~~viafgGD~n 824 (895)
++||.|. ||-+=++.|.+..||+.+++ .|+||.+
T Consensus 101 ~~eI~~g--sK~~Hf~~i~~~tgI~y~eM-lFFDDe~ 134 (169)
T PF12689_consen 101 YLEIYPG--SKTTHFRRIHRKTGIPYEEM-LFFDDES 134 (169)
T ss_dssp EEEESSS---HHHHHHHHHHHH---GGGE-EEEES-H
T ss_pred hhheecC--chHHHHHHHHHhcCCChhHE-EEecCch
Confidence 6899985 99999999999999999995 5588754
No 467
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=24.42 E-value=93 Score=30.52 Aligned_cols=45 Identities=31% Similarity=0.331 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEe
Q 002665 626 LEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFIC 677 (895)
Q Consensus 626 ~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~ 677 (895)
.+...++|+.|+++| +.++|+|+... ....++.+++. ..+|.+++
T Consensus 89 ~pg~~~~L~~L~~~g----~~~~i~s~~~~--~~~~l~~~~l~-~~f~~~~~ 133 (185)
T TIGR01990 89 LPGIKNLLDDLKKNN----IKIALASASKN--APTVLEKLGLI-DYFDAIVD 133 (185)
T ss_pred CccHHHHHHHHHHCC----CeEEEEeCCcc--HHHHHHhcCcH-hhCcEEEe
Confidence 346788899999886 99999998753 34678888874 23455554
No 468
>PF01282 Ribosomal_S24e: Ribosomal protein S24e; InterPro: IPR001976 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This family contains the S24e ribosomal proteins from eukaryotes and archaebacteria. These proteins have 101 to 148 amino acids.; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005622 intracellular, 0005840 ribosome; PDB: 2V94_B 1YWX_A 2G1D_A 3IZ6_U 1XN9_A 2XZM_P 2XZN_P 3U5G_Y 3J16_D 3IZB_U ....
Probab=23.85 E-value=1.7e+02 Score=25.14 Aligned_cols=31 Identities=23% Similarity=0.197 Sum_probs=24.3
Q ss_pred eEEeecCC---CChHHHHHHHHHHhCCCcccEEE
Q 002665 788 KLHVIPVL---ASRSQALRYLHVRWGIDLSNVVV 818 (895)
Q Consensus 788 ~lEI~p~g---~sKg~al~~L~~~lgi~~~~via 818 (895)
.+||...| .||..-...|++.++++++.+++
T Consensus 2 ~~~v~h~g~~Tpsr~ei~~klA~~~~~~~~~ivv 35 (84)
T PF01282_consen 2 VFEVLHPGKPTPSRKEIREKLAAMLNVDPDLIVV 35 (84)
T ss_dssp EEEEE-SSSSS--HHHHHHHHHHHHTSTGCCEEE
T ss_pred EEEEECCCCCCCCHHHHHHHHHHHhCCCCCeEEE
Confidence 35666666 68999999999999999999998
No 469
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=23.80 E-value=1.1e+02 Score=31.86 Aligned_cols=57 Identities=14% Similarity=0.032 Sum_probs=41.9
Q ss_pred cccEEEEEEecCCCC-----------------------------hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHH-
Q 002665 608 RRKYVFVIAADCDTT-----------------------------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILE- 657 (895)
Q Consensus 608 ~~~kli~~DiDGTL~-----------------------------~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~- 657 (895)
.+++.|++|||-|.. ...-+...+.++-..++| ..|...|-|....
T Consensus 77 ~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yvn~~G----g~ifyiSNR~~~~~ 152 (274)
T COG2503 77 GKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYVNSNG----GKIFYISNRDQENE 152 (274)
T ss_pred CCCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhhcccccCccHHHHHHHHHhcC----cEEEEEeccchhcc
Confidence 456699999999981 124556778888888886 7888999997665
Q ss_pred ---HHHHHHhCCCC
Q 002665 658 ---LHSLLVSGGLS 668 (895)
Q Consensus 658 ---~~~~l~~l~l~ 668 (895)
..+-|+..|++
T Consensus 153 ~~~T~~nLk~~g~~ 166 (274)
T COG2503 153 KDGTIENLKSEGLP 166 (274)
T ss_pred cchhHHHHHHcCcc
Confidence 44566677773
No 470
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=23.59 E-value=5.4e+02 Score=27.29 Aligned_cols=112 Identities=13% Similarity=0.070 Sum_probs=64.2
Q ss_pred EEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHH
Q 002665 321 ALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPD 400 (895)
Q Consensus 321 ~vgrl~~~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ 400 (895)
+++.+.-....+.+++..+++.+.........+-=.+......+.-..+-+..+.+..+++|+.- +.-.++.+++..
T Consensus 28 ~IAGpc~ie~~~~~~~~A~~lk~~~~k~~r~~~~KpRtsp~s~~g~g~~gl~~l~~~~~~~Gl~~---~t~~~d~~~~~~ 104 (260)
T TIGR01361 28 VIAGPCSVESEEQIMETARFVKEAGAKILRGGAFKPRTSPYSFQGLGEEGLKLLRRAADEHGLPV---VTEVMDPRDVEI 104 (260)
T ss_pred EEEeCCccCCHHHHHHHHHHHHHHHHHhccCceecCCCCCccccccHHHHHHHHHHHHHHhCCCE---EEeeCChhhHHH
Confidence 35556666777888888877754322110000111111111111111333555777778887632 233344566777
Q ss_pred HHHHhhcCCcEEEecCCCCCCChHHHHHHHc-CCCEEEcCC
Q 002665 401 IYRLAAKTKGVFINPAFIEPFGLTLIEAAAY-GLPIVATKN 440 (895)
Q Consensus 401 ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~a~-G~PVvat~~ 440 (895)
+...+ |++-++|. +-.+..++++++. |+||+.+..
T Consensus 105 l~~~~----d~lkI~s~-~~~n~~LL~~~a~~gkPVilk~G 140 (260)
T TIGR01361 105 VAEYA----DILQIGAR-NMQNFELLKEVGKQGKPVLLKRG 140 (260)
T ss_pred HHhhC----CEEEECcc-cccCHHHHHHHhcCCCcEEEeCC
Confidence 76777 99999875 6667888888876 999987654
No 471
>PRK09449 dUMP phosphatase; Provisional
Probab=23.56 E-value=96 Score=31.71 Aligned_cols=46 Identities=15% Similarity=0.052 Sum_probs=35.3
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeC
Q 002665 627 EIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICN 678 (895)
Q Consensus 627 ~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 678 (895)
+...++|+.|+ +| ++++|+|.-+...+...++.+++. ..+|.++++
T Consensus 98 ~g~~~~L~~L~-~~----~~~~i~Tn~~~~~~~~~l~~~~l~-~~fd~v~~~ 143 (224)
T PRK09449 98 PGAVELLNALR-GK----VKMGIITNGFTELQQVRLERTGLR-DYFDLLVIS 143 (224)
T ss_pred ccHHHHHHHHH-hC----CeEEEEeCCcHHHHHHHHHhCChH-HHcCEEEEE
Confidence 45688888888 44 899999998888888889998873 235666664
No 472
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=23.50 E-value=48 Score=33.90 Aligned_cols=15 Identities=7% Similarity=0.005 Sum_probs=12.7
Q ss_pred ccEEEEEEecCCCCh
Q 002665 609 RKYVFVIAADCDTTS 623 (895)
Q Consensus 609 ~~kli~~DiDGTL~~ 623 (895)
+.|+++||+||||..
T Consensus 3 ~~~~viFD~DGTL~d 17 (221)
T PRK10563 3 QIEAVFFDCDGTLVD 17 (221)
T ss_pred CCCEEEECCCCCCCC
Confidence 468999999999954
No 473
>COG0803 LraI ABC-type metal ion transport system, periplasmic component/surface adhesin [Inorganic ion transport and metabolism]
Probab=23.00 E-value=5.9e+02 Score=27.63 Aligned_cols=104 Identities=16% Similarity=0.232 Sum_probs=60.8
Q ss_pred HHHHHhhcCCcEEEecCC-CCCCChHHHHHHHcCC-CEEEcCCCC-cccccc-----cCCceEEeCCCCHHHHHHHHHHH
Q 002665 400 DIYRLAAKTKGVFINPAF-IEPFGLTLIEAAAYGL-PIVATKNGG-PVDIHR-----VLDNGLLVDPHDQQSIADALLKL 471 (895)
Q Consensus 400 ~ly~~a~~~~Dv~v~ps~-~eg~gl~~~Ea~a~G~-PVvat~~gg-~~eiv~-----~~~~g~lv~p~d~~~la~ai~~l 471 (895)
.-.+.| |+++.-.. .|+|=..+++.+.... ++|....|- ...+-. ..+.....+|.+...+++.|.+.
T Consensus 77 ~~i~~A----Dliv~nG~~le~w~~k~~~~~~~~~~~~i~~s~~i~~~~~~~~~~~g~~dpH~Wldp~na~~~v~~I~~~ 152 (303)
T COG0803 77 AKLRKA----DLIVYNGLGLEPWLEKLLESADKKKVLVIEVSDGIELLPLPGEEEEGVNDPHVWLDPKNAKIYAENIADA 152 (303)
T ss_pred HHHHhC----CEEEEcCCChHHHHHHHHHhcccCCceEEEccCCccccCCCCccccCCCCCCeecCHHHHHHHHHHHHHH
Confidence 344555 78776543 4555555555554432 233322111 111110 12456778889999999999999
Q ss_pred hh--CHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhh
Q 002665 472 VS--DKQLWERCRQNGLKNIHQFSWPEHCKSYLSRISSCK 509 (895)
Q Consensus 472 l~--~~~~~~~~~~~~~~~v~~~s~~~~a~~~~~~l~~~~ 509 (895)
|. +|+..+.+.+|+.++.++. +..-+.+...++.+.
T Consensus 153 L~~~dP~~~~~y~~N~~~y~~kL--~~l~~~~~~~~~~~~ 190 (303)
T COG0803 153 LVELDPENKETYEKNAEAYLKKL--NKLDEEAKAKLSKIP 190 (303)
T ss_pred HHHhCcccHHHHHHHHHHHHHHH--HHHHHHHHHHHhcCC
Confidence 87 9999999999999988533 233444444444443
No 474
>TIGR01088 aroQ 3-dehydroquinate dehydratase, type II. This model specifies the type II enzyme. The type I enzyme, often found as part of a multifunctional protein, is described by TIGR01093.
Probab=22.95 E-value=2.3e+02 Score=26.91 Aligned_cols=103 Identities=19% Similarity=0.246 Sum_probs=62.5
Q ss_pred hHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCC-cEEEecCCCCCCChHHHHHHHc-CCCEEEcCCC--C
Q 002665 367 NAALLLSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTK-GVFINPAFIEPFGLTLIEAAAY-GLPIVATKNG--G 442 (895)
Q Consensus 367 ~~~~~~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~-Dv~v~ps~~eg~gl~~~Ea~a~-G~PVvat~~g--g 442 (895)
-+++...+.+.+.++++ .+.|..+=..-++.+....|.... .++++|.-+.-.+..+.+|++. ++|+|=-... -
T Consensus 26 l~di~~~~~~~a~~~g~--~v~~~QSN~EGelId~i~~a~~~~dgiIINpga~THtSiAl~DAl~~~~~P~vEVHiSNi~ 103 (141)
T TIGR01088 26 LEEIVEIIETFAAQLNV--ELEFFQSNSEGQLIDKIHEAEGQYDGIIINPGALTHTSVALRDALAAVSLPVVEVHLSNVH 103 (141)
T ss_pred HHHHHHHHHHHHHHcCC--EEEEEeeCcHHHHHHHHHhccccCCEEEEcChHHhhhHHHHHHHHHcCCCCEEEEEcCCcc
Confidence 34556777777777776 466665544557888888775433 4777887777778899999866 9999753221 1
Q ss_pred cc------cccccCCceEEeCCCCHHHHHHHHHHHh
Q 002665 443 PV------DIHRVLDNGLLVDPHDQQSIADALLKLV 472 (895)
Q Consensus 443 ~~------eiv~~~~~g~lv~p~d~~~la~ai~~ll 472 (895)
.+ .++..-..|.+. -.-.....-||..++
T Consensus 104 aRE~fR~~S~is~~~~G~I~-G~G~~gY~lAl~a~~ 138 (141)
T TIGR01088 104 AREEFRHHSYTAPVAGGVIV-GLGAQGYLLALRYLV 138 (141)
T ss_pred ccccccccccccccceEEEe-ecCHHHHHHHHHHHH
Confidence 22 233333345544 234555555555544
No 475
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=22.95 E-value=2e+02 Score=29.69 Aligned_cols=42 Identities=5% Similarity=-0.046 Sum_probs=34.0
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEE
Q 002665 797 SRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVIL 841 (895)
Q Consensus 797 sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaM 841 (895)
.+......+++++|+++++++. +||+.. | ++.=+.+|+..+.
T Consensus 153 P~p~~y~~i~~~lgv~p~e~lf-VgDs~~-D-i~AA~~AG~~ti~ 194 (220)
T TIGR01691 153 TEAQSYVKIAGQLGSPPREILF-LSDIIN-E-LDAARKAGLHTGQ 194 (220)
T ss_pred CCHHHHHHHHHHhCcChhHEEE-EeCCHH-H-HHHHHHcCCEEEE
Confidence 3566789999999999999987 777776 7 8888888876554
No 476
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=22.08 E-value=1.9e+02 Score=26.88 Aligned_cols=55 Identities=9% Similarity=-0.005 Sum_probs=40.3
Q ss_pred cEEEEEEecCCCC------------hhhHHHHHHHHHHHhccCCCCceEEEEEcCC-CHHHHHHHHHhCCCC
Q 002665 610 KYVFVIAADCDTT------------SDFLEIIKKVVEAAGKDNSAGFIGFVLSTAL-TILELHSLLVSGGLS 668 (895)
Q Consensus 610 ~kli~~DiDGTL~------------~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR-~~~~~~~~l~~l~l~ 668 (895)
.+++.+++|+|+. -..-+..+..|..|+++| +..++||-- .+.-+.+.|+.+.++
T Consensus 18 P~~vdthl~~pfkP~k~~~g~~g~e~~fY~Di~rIL~dLk~~G----Vtl~~ASRt~ap~iA~q~L~~fkvk 85 (144)
T KOG4549|consen 18 PRLVDTHLDYPFKPFKCECGSKGEEMIFYDDIRRILVDLKKLG----VTLIHASRTMAPQIASQGLETFKVK 85 (144)
T ss_pred eEEEEecccccccccccCcccCcceeeeccchhHHHHHHHhcC----cEEEEecCCCCHHHHHHHHHHhccC
Confidence 4678888999881 113345677888899987 998888744 666778888888774
No 477
>TIGR01283 nifE nitrogenase molybdenum-iron cofactor biosynthesis protein NifE. This protein is part of the NifEN complex involved in biosynthesis of the molybdenum-iron cofactor used by the homologous NifDK complex of nitrogenase. In a few species, the protein is found as a NifEN fusion protein.
Probab=21.87 E-value=1.1e+03 Score=27.32 Aligned_cols=82 Identities=13% Similarity=0.178 Sum_probs=48.7
Q ss_pred HHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEecCCCCCCChHHHHHH--HcCCCEEEcCCCCccccccc
Q 002665 372 LSILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAA--AYGLPIVATKNGGPVDIHRV 449 (895)
Q Consensus 372 ~~i~~~~~~~~l~~~v~~~g~~~~~el~~ly~~a~~~~Dv~v~ps~~eg~gl~~~Ea~--a~G~PVvat~~gg~~eiv~~ 449 (895)
.+|..+.+++|+..+..+.+.-+.+|+..+-++. +-|+. ....+..+.++| -+|+|.+... +
T Consensus 213 ~el~~lL~~~Gl~v~~~~~~~~s~eei~~~~~A~-----lniv~--~~~~~~~~a~~L~e~~GiP~~~~~---~------ 276 (456)
T TIGR01283 213 WHVKPLLEKLGIRVLATITGDSRYAEVQTAHRAK-----LNMVQ--CSKSMINLARKMEEKYGIPYFEGS---F------ 276 (456)
T ss_pred HHHHHHHHHcCCeEEEEeCCCCcHHHHHhcccCc-----EEEEE--CHhHHHHHHHHHHHHcCCCEEecC---C------
Confidence 4677888999998888888774445555444443 22221 122335677777 4599998521 0
Q ss_pred CCceEEeCCCCHHHHHHHHHHHhhCH
Q 002665 450 LDNGLLVDPHDQQSIADALLKLVSDK 475 (895)
Q Consensus 450 ~~~g~lv~p~d~~~la~ai~~ll~~~ 475 (895)
+-..+.+++-+.|.+++..+
T Consensus 277 ------~G~~~T~~~L~~Ia~~lg~~ 296 (456)
T TIGR01283 277 ------YGIEDTSKALRDIADLFGDE 296 (456)
T ss_pred ------CcHHHHHHHHHHHHHHhCCh
Confidence 11235566666666666544
No 478
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=21.85 E-value=1.2e+02 Score=30.50 Aligned_cols=46 Identities=17% Similarity=0.148 Sum_probs=33.2
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeC
Q 002665 627 EIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGLSPLAFDAFICN 678 (895)
Q Consensus 627 ~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l~~~~~d~~I~~ 678 (895)
+.+.++|+.|+++| +.++|+|+-+.. +...++.+++. ..+|.++++
T Consensus 108 ~g~~~~l~~L~~~g----~~~~i~Sn~~~~-~~~~l~~~~l~-~~fd~i~~s 153 (203)
T TIGR02252 108 PDAIKLLKDLRERG----LILGVISNFDSR-LRGLLEALGLL-EYFDFVVTS 153 (203)
T ss_pred cCHHHHHHHHHHCC----CEEEEEeCCchh-HHHHHHHCCcH-HhcceEEee
Confidence 45688899999886 899999987654 57788888873 234555553
No 479
>PRK12311 rpsB 30S ribosomal protein S2/unknown domain fusion protein; Provisional
Probab=21.13 E-value=7e+02 Score=27.45 Aligned_cols=71 Identities=10% Similarity=0.005 Sum_probs=38.3
Q ss_pred CcccCcc-----cccCCCCcccccccEEEEEEecCCCChhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHH-HHHHH
Q 002665 590 GTQKADH-----NVASGKFPALRRRKYVFVIAADCDTTSDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTILEL-HSLLV 663 (895)
Q Consensus 590 ~~~~~~~-----~~~~~~~~~~~~~~kli~~DiDGTL~~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~-~~~l~ 663 (895)
++.+-|| |+.+..+-+. .+..+-++|++-|+. -.......+..+.++| |..++|.|-+....+ ....+
T Consensus 7 agvH~Gh~~~~wnpkM~~yIyg-~R~gihIIDL~kT~~--~L~~A~~~i~~~~~~g---g~iLfVgTk~~~~~~V~~~A~ 80 (326)
T PRK12311 7 AGVHFGHQSHRWNPKMAPYIFG-TRNNIHIIDLAQTVP--LLHRALQAVSDTVAKG---GRVLFVGTKRQAQDAVADAAK 80 (326)
T ss_pred CCeecccCCCCCCCcccCceec-ccCCcEEEcHHHHHH--HHHHHHHHHHHHHhCC---CEEEEEeCcHHHHHHHHHHHH
Confidence 3445555 3334444444 456888899998872 2233344445454453 466667777754433 33344
Q ss_pred hCC
Q 002665 664 SGG 666 (895)
Q Consensus 664 ~l~ 666 (895)
..+
T Consensus 81 ~~g 83 (326)
T PRK12311 81 RSA 83 (326)
T ss_pred HhC
Confidence 444
No 480
>COG2861 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.12 E-value=5.3e+02 Score=26.92 Aligned_cols=49 Identities=16% Similarity=0.064 Sum_probs=31.4
Q ss_pred cEEEEEEecCCCC-hhhHHHHHHHHHHHhccCCCCceEEEEEcCCCHH----HHHHHHHhCC
Q 002665 610 KYVFVIAADCDTT-SDFLEIIKKVVEAAGKDNSAGFIGFVLSTALTIL----ELHSLLVSGG 666 (895)
Q Consensus 610 ~kli~~DiDGTL~-~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~----~~~~~l~~l~ 666 (895)
++=+| +|++.+ +.+...+.++.+..+++| .+|+.|-++. -+++|+.+++
T Consensus 178 ~rdvf--LD~e~~~~~V~kql~~~~~~Ark~G------~ai~IGh~~~~Tv~vl~~~~~~l~ 231 (250)
T COG2861 178 KRDVF--LDDEDTEAAVLKQLDAAEKLARKNG------SAIGIGHPHKNTVAVLQQWLDELP 231 (250)
T ss_pred eeeee--ecCcCCHHHHHHHHHHHHHHHHhcC------ceEEecCCchhHHHHHHHHHHhCC
Confidence 34445 688886 667778888888888887 3445555444 4455555554
No 481
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=20.83 E-value=1.6e+02 Score=32.32 Aligned_cols=39 Identities=8% Similarity=-0.111 Sum_probs=32.9
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 625 FLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 625 ~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
+.+...++++.|++.| ++++|+||-....+..+++++++
T Consensus 182 l~pGa~elL~~Lk~~G----~~~aIvSgg~~~~~~~l~~~Lgl 220 (322)
T PRK11133 182 LMPGLTELVLKLQALG----WKVAIASGGFTYFADYLRDKLRL 220 (322)
T ss_pred CChhHHHHHHHHHHcC----CEEEEEECCcchhHHHHHHHcCC
Confidence 3456788999999987 99999999987778888888888
No 482
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=20.78 E-value=4.5e+02 Score=24.00 Aligned_cols=41 Identities=17% Similarity=0.097 Sum_probs=29.8
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEEEcCCCHHHHHHHHHhCCC
Q 002665 625 FLEIIKKVVEAAGKDNSAGFIGFVLSTALTILELHSLLVSGGL 667 (895)
Q Consensus 625 ~~~~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~~l~~l~l 667 (895)
..+..++.++.|++.| .....+++-|+......+.+.+.|+
T Consensus 63 ~~~~~~~~~~~L~~~~--~~~i~i~~GG~~~~~~~~~~~~~G~ 103 (122)
T cd02071 63 HMTLFPEVIELLRELG--AGDILVVGGGIIPPEDYELLKEMGV 103 (122)
T ss_pred hHHHHHHHHHHHHhcC--CCCCEEEEECCCCHHHHHHHHHCCC
Confidence 4445678888888886 3234567888887776777888898
No 483
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=20.77 E-value=1.1e+02 Score=33.30 Aligned_cols=37 Identities=24% Similarity=0.365 Sum_probs=30.3
Q ss_pred EEEecccccccCccCCCCCCCCCchhhHHHHHHHHHhcCCCcceEEEeecc
Q 002665 10 YLCSLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQ 60 (895)
Q Consensus 10 ~~i~~~~~~~~~~~~~g~~~~~GG~~~~v~~La~~L~~~g~~~~V~vit~~ 60 (895)
++|.+||+ .-|..+.|+..|++++.++| +.|+|+-.+
T Consensus 77 ~vVl~HGL------------~G~s~s~y~r~L~~~~~~rg--~~~Vv~~~R 113 (345)
T COG0429 77 LVVLFHGL------------EGSSNSPYARGLMRALSRRG--WLVVVFHFR 113 (345)
T ss_pred eEEEEecc------------CCCCcCHHHHHHHHHHHhcC--CeEEEEecc
Confidence 67888998 23445669999999999999 999999654
No 484
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=20.74 E-value=1.1e+02 Score=32.42 Aligned_cols=33 Identities=6% Similarity=0.173 Sum_probs=28.3
Q ss_pred ecCCCChHHHHHHHHHHhCCCcccEEEEeCcCCC
Q 002665 792 IPVLASRSQALRYLHVRWGIDLSNVVVIAGECGD 825 (895)
Q Consensus 792 ~p~g~sKg~al~~L~~~lgi~~~~viafgGD~nn 825 (895)
+-.|.+||.+|..++++.|..++.+|. +||+-.
T Consensus 157 ft~~~~KG~~L~~fL~~~~~~pk~IIf-IDD~~~ 189 (252)
T PF11019_consen 157 FTGGQDKGEVLKYFLDKINQSPKKIIF-IDDNKE 189 (252)
T ss_pred EeCCCccHHHHHHHHHHcCCCCCeEEE-EeCCHH
Confidence 446779999999999999999998877 888754
No 485
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=20.68 E-value=69 Score=30.11 Aligned_cols=53 Identities=11% Similarity=0.001 Sum_probs=35.4
Q ss_pred EEEEEEecCCCC---hhhHHHHHHHHHHHhccCCCCceEEEEEcCC--CHHHHHHHHHhCCC
Q 002665 611 YVFVIAADCDTT---SDFLEIIKKVVEAAGKDNSAGFIGFVLSTAL--TILELHSLLVSGGL 667 (895)
Q Consensus 611 kli~~DiDGTL~---~~~~~~~~~~l~~l~~~g~~~~i~vviaTGR--~~~~~~~~l~~l~l 667 (895)
-+-++|+||.+. ..-.-...+.++.+.+.| ..++|||-= ++..++.+...++-
T Consensus 44 giAildL~G~~l~l~S~R~~~~~evi~~I~~~G----~PviVAtDV~p~P~~V~Kia~~f~A 101 (138)
T PF04312_consen 44 GIAILDLDGELLDLKSSRNMSRSEVIEWISEYG----KPVIVATDVSPPPETVKKIARSFNA 101 (138)
T ss_pred EEEEEecCCcEEEEEeecCCCHHHHHHHHHHcC----CEEEEEecCCCCcHHHHHHHHHhCC
Confidence 355799999982 222223455677777776 889999864 66677777666543
No 486
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=20.25 E-value=5.4e+02 Score=26.18 Aligned_cols=110 Identities=8% Similarity=-0.005 Sum_probs=62.8
Q ss_pred EEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEEEEecCCCchhhhhhhHHHHHHHHHHHHHc-CCCCCEEeCCCCCC
Q 002665 319 ILALARPDP--KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGTNAALLLSILKLIDKY-DLYGQVAYPKHHKQ 395 (895)
Q Consensus 319 Il~vgrl~~--~Kgi~~ll~A~~~l~~~~~~~~l~livG~~~~~~~l~~~~~~~~~~i~~~~~~~-~l~~~v~~~g~~~~ 395 (895)
++.-|..+. ..+.+.+.+.+..+. ...+++. ++..... ..+++...+.+.+.++ +....+.. ..+.
T Consensus 3 ~~igg~~~~~~~~~~~~l~~~l~~~~--~~~~~i~-~IptAs~------~~~~~~~~~~~a~~~l~G~~~~~~~--~~~~ 71 (212)
T cd03146 3 LLTSGGGLGYLAHALPAIDDLLLSLT--KARPKVL-FVPTASG------DRDEYTARFYAAFESLRGVEVSHLH--LFDT 71 (212)
T ss_pred EEEeCCcccccccchHHHHHHHHHhc--cCCCeEE-EECCCCC------CHHHHHHHHHHHHhhccCcEEEEEe--ccCc
Confidence 344444433 334555555555542 3445563 4443332 1234566777777888 76433322 2225
Q ss_pred CcHHHHHHHhhcCCcEEEecCC--------CC--CCChHHHHHHHcCCCEEEcCCCCc
Q 002665 396 SDVPDIYRLAAKTKGVFINPAF--------IE--PFGLTLIEAAAYGLPIVATKNGGP 443 (895)
Q Consensus 396 ~el~~ly~~a~~~~Dv~v~ps~--------~e--g~gl~~~Ea~a~G~PVvat~~gg~ 443 (895)
++..+.+..| |++++|-= .. ++--.+.++...|+|++.+.+|..
T Consensus 72 ~~~~~~l~~a----d~I~l~GG~~~~~~~~l~~~~l~~~l~~~~~~g~~i~G~SAGa~ 125 (212)
T cd03146 72 EDPLDALLEA----DVIYVGGGNTFNLLAQWREHGLDAILKAALERGVVYIGWSAGSN 125 (212)
T ss_pred ccHHHHHhcC----CEEEECCchHHHHHHHHHHcCHHHHHHHHHHCCCEEEEECHhHH
Confidence 6778888999 99999831 01 122235566678999999998874
No 487
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=20.02 E-value=1.3e+02 Score=31.65 Aligned_cols=37 Identities=16% Similarity=0.047 Sum_probs=26.1
Q ss_pred HHHHHHHHHhccCCCCceEEEEEcCCCHHHHHH---HHHhCCCC
Q 002665 628 IIKKVVEAAGKDNSAGFIGFVLSTALTILELHS---LLVSGGLS 668 (895)
Q Consensus 628 ~~~~~l~~l~~~g~~~~i~vviaTGR~~~~~~~---~l~~l~l~ 668 (895)
...+.++.|+++| +.++-.|.|+...... .|+++|+.
T Consensus 85 ~~~~~i~~lq~~~----~~v~alT~~~~~~~~~t~~~Lk~~gi~ 124 (252)
T PF11019_consen 85 DVPNIINSLQNKG----IPVIALTARGPNMEDWTLRELKSLGID 124 (252)
T ss_pred hHHHHHHHHHHCC----CcEEEEcCCChhhHHHHHHHHHHCCCC
Confidence 3456677788876 9999999999766543 35566774
No 488
>PRK08238 hypothetical protein; Validated
Probab=20.01 E-value=1.7e+02 Score=34.08 Aligned_cols=45 Identities=16% Similarity=0.192 Sum_probs=31.9
Q ss_pred cCCCChHHHHHHHHHHhCCCcccEEEEeCcCCCccccccccCcceEEEEcCch
Q 002665 793 PVLASRSQALRYLHVRWGIDLSNVVVIAGECGDTDYEGLLGGVHKTVILKGVG 845 (895)
Q Consensus 793 p~g~sKg~al~~L~~~lgi~~~~viafgGD~nn~D~~~Ml~~ag~gVaMgNA~ 845 (895)
.++..|...++ +.++ .++++. .||+.+ | ++|++.++..++++...
T Consensus 124 ~kg~~K~~~l~---~~l~--~~~~~y-vGDS~~-D-lp~~~~A~~av~Vn~~~ 168 (479)
T PRK08238 124 LKGAAKAAALV---EAFG--ERGFDY-AGNSAA-D-LPVWAAARRAIVVGASP 168 (479)
T ss_pred cCCchHHHHHH---HHhC--ccCeeE-ecCCHH-H-HHHHHhCCCeEEECCCH
Confidence 34445766555 4444 244655 688877 8 99999999999998665
Done!