BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002670
(894 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2IUJ|A Chain A, Crystal Structure Of Soybean Lipoxygenase-B
Length = 853
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/868 (42%), Positives = 516/868 (59%), Gaps = 54/868 (6%)
Query: 59 SKNIEAIATSTEKSVSVINAVVTVKATWKDDYEDYLFGRTLRLELVSAELDHTT--GSEK 116
+ I+ +K+V IN++ +V D + G L + + + LD T S
Sbjct: 8 GQKIKGTMVVMQKNVLDINSITSV---------DGIVGTGL--DFLGSALDTVTFLASSI 56
Query: 117 STIYAHASKA--GKDKHGN-----------------ELYEATFNVPSDFGEVGAMSVENE 157
S A+KA GK K G E Y+A F+ SDFG GA ++N
Sbjct: 57 SIQLISATKADGGKGKVGKATNLRGKITLPTIGAKEEAYDAQFDWDSDFGIPGAFYIKNY 116
Query: 158 HHVEIYLMNIVLDGFSNGDPVNITCNSWIQPKNKNEPKRIFFTNKSYLPSQTPDGLKRFR 217
E YL +++L+ N ++ CNSW+ + RIFF N +YLPS+TP L ++R
Sbjct: 117 MQNEFYLKSLILEDIPNHGTIHFICNSWVYNSKHYKTDRIFFANNTYLPSETPAPLVKYR 176
Query: 218 IEELYHLRGHGQGVRQPSDRIYDYDVYNDLGNPDK----RRPVLGGKKFPYPRRCRTGRQ 273
EEL ++RG G G R+ DRIYDYDVYNDLG+PDK RPVLGG PYPRR RTGR
Sbjct: 177 EEELKNVRGDGTGERKEWDRIYDYDVYNDLGDPDKGEKYARPVLGGSALPYPRRGRTGRG 236
Query: 274 HYESDPLKEKRDKYIYVPRDETFSDVKQEAFDNMKDYKSMCHAALPYIEKFFDGDK---K 330
DP EK ++Y+PRDE F +K F KS+ LP + FDG+
Sbjct: 237 KTRKDPNSEKPGDFVYLPRDEAFGHLKSSDF-LAYGIKSVAQDVLPVLTDAFDGNLLSLD 295
Query: 331 FEYFTEIDELFNEDGFSLPEAEPGFLNSLARFAKTLKEMGEEVFQFDAPEAMLRDKFFWF 390
F+ F E+ +L+ E G +LP + + + + GE+ ++ P+ M DK W
Sbjct: 296 FDNFAEVRKLY-EGGVTLPTNFLSNITPIPIIKELFRTDGEQFLKYPPPKVMQVDKSAWM 354
Query: 391 RDEEFARQTLAGLNPCSIQLITEWPLKSSLDPKIYGPRLQESEITKDIIEKELGAMISVE 450
DEEFAR+T+AGLNP I++I E+PL S LD + YG ITK+ +E LG + +VE
Sbjct: 355 TDEEFARETIAGLNPNVIKIIEEFPLSSKLDTQAYGD--HTCIITKEHLEPNLGGL-TVE 411
Query: 451 EAIEQKKLFMLDYHDLFLPYVEKVRKLEHTTLYGSRTVFFLTPDNTLRPLAIELTRP-PM 509
+AI+ KKLF+LD+HD +PY+ K+ T Y +RT+FFL D TL PLAIEL++P P
Sbjct: 412 QAIQNKKLFILDHHDYLIPYLRKINA-NTTKTYATRTIFFLKNDGTLTPLAIELSKPHPQ 470
Query: 510 DDK--PLWRKVYTPGSWNSTKTWLWRLAKAHVLAHDSGYHQLVSHWLRSHCVVEPYIIAT 567
++ P+ +VY P S + ++W LAKA+V+ +D+ YHQ++SHWL +H VVEP++IAT
Sbjct: 471 GEEYGPV-SEVYVPSS-EGVEAYIWLLAKAYVVVNDACYHQIISHWLNTHAVVEPFVIAT 528
Query: 568 NRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGGVIENTFSPGEYCMEMSSVIYDKQ 627
NR LSV+HPIY+LL PH R T+ +N++ R L++A G+IE TF G Y +EMS+VIY K
Sbjct: 529 NRHLSVVHPIYKLLFPHYRDTMNINSLARKSLVNADGIIEKTFLWGRYSLEMSAVIY-KD 587
Query: 628 WRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLDLWGILKQWVTDYVNHYY 687
W F +QALP DL+KRG+AV+DP+A HG++L I+DYP+A DGL++W +K WV +YV+ YY
Sbjct: 588 WVFTDQALPNDLVKRGVAVKDPSAPHGVRLLIEDYPYASDGLEIWDAIKSWVEEYVSFYY 647
Query: 688 PDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLKTPQNLIEILTTIIWVASGHHAAV 747
++ D ELQAWW E+ VGH D KD+PWW ++T + L+E T+IW+AS HAAV
Sbjct: 648 KSDEELQKDPELQAWWKELVEVGHGDLKDKPWWQKMQTREELVEASATLIWIASALHAAV 707
Query: 748 NFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIATL 807
NFGQY Y NRPTI+R MP++ E + + PE L T + + ++ + +
Sbjct: 708 NFGQYPYGGLILNRPTISRRFMPEKGSPE--YDALAKNPEKEFLKTITGKKETLIDLTII 765
Query: 808 DLLSTHSPDEEFLG-KGKEPAWGEDPVINAAFEKFSGRLMELEGIIDERNGDSTLVNRNG 866
++LS H+ DE +LG + W D AF++F L E+E + E+N D TL NR G
Sbjct: 766 EILSRHASDEFYLGQRDGGDYWTSDAGPLEAFKRFGKNLEEIEKKLIEKNNDETLRNRYG 825
Query: 867 AGVVPYNLLKPYWKDGDKEKGVPYSISI 894
+PY LL P ++G +G+P SISI
Sbjct: 826 PAKMPYTLLYPSSEEGLTFRGIPNSISI 853
>pdb|1IK3|A Chain A, Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydroperoxy-
9(Z),11(E)-Octadecadienoic Acid
pdb|1HU9|A Chain A, Lipoxygenase-3 (Soybean) Complex With 4-Hydroperoxy-2-
Methoxy-Phenol
pdb|1JNQ|A Chain A, Lipoxygenase-3 (Soybean) Complex With Epigallocathechin
(Egc)
pdb|1N8Q|A Chain A, Lipoxygenase In Complex With Protocatechuic Acid
pdb|1NO3|A Chain A, Refined Structure Of Soybean Lipoxygenase-3 With
4-nitrocatechol At 2.15 Angstrom Resolution
pdb|1RRH|A Chain A, Soybean Lipoxygenase (Lox-3) At Ambient Temperatures At
2.0 A Resolution
pdb|1RRL|A Chain A, Soybean Lipoxygenase (Lox-3) At 93k At 2.0 A Resolution
pdb|1RRL|B Chain B, Soybean Lipoxygenase (Lox-3) At 93k At 2.0 A Resolution
pdb|1LNH|A Chain A, Lipoxygenase-3(Soybean) Non-Heme Fe(Ii) Metalloprotein
Length = 857
Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/869 (40%), Positives = 509/869 (58%), Gaps = 31/869 (3%)
Query: 40 LKIGSKVRVSCHSKRHNVSSKNIEAIATSTEKSVSVINAVVTVKATWKDDYEDYLFGRTL 99
L G K++ + R NV N S +I + + + D +L GR++
Sbjct: 6 LHRGHKIKGTVVLMRKNVLDVN------SVTSVGGIIGQGLDLVGSTLDTLTAFL-GRSV 58
Query: 100 RLELVSAELDHTTGSEK----STIYAHASKAGKDKHGNELYEATFNVPSDFGEVGAMSVE 155
L+L+SA G K + + + G ++ F G GA ++
Sbjct: 59 SLQLISATKADANGKGKLGKATFLEGIITSLPTLGAGQSAFKINFEWDDGSGIPGAFYIK 118
Query: 156 NEHHVEIYLMNIVLDGFSNGDPVNITCNSWIQPKNKNEPKRIFFTNKSYLPSQTPDGLKR 215
N E +L+++ L+ N ++ CNSWI + RIFF N++YLPS+TP L +
Sbjct: 119 NFMQTEFFLVSLTLEDIPNHGSIHFVCNSWIYNAKLFKSDRIFFANQTYLPSETPAPLVK 178
Query: 216 FRIEELYHLRGHGQGVRQPSDRIYDYDVYNDLGNPDK----RRPVLGGK-KFPYPRRCRT 270
+R EEL++LRG G G R+ +RIYDYDVYNDLG+PDK RPVLGG FPYPRR RT
Sbjct: 179 YREEELHNLRGDGTGERKEWERIYDYDVYNDLGDPDKGENHARPVLGGNDTFPYPRRGRT 238
Query: 271 GRQHYESDPLKEKRDKYIYVPRDETFSDVKQEAFDNMKDYKSMCHAALPYIEKFFDGD-- 328
GR+ DP E R +Y+PRDE F +K F KS+ LP ++ FD +
Sbjct: 239 GRKPTRKDPNSESRSNDVYLPRDEAFGHLKSSDFLTY-GLKSVSQNVLPLLQSAFDLNFT 297
Query: 329 -KKFEYFTEIDELFNEDGFSLPEAEPGFLNSLARFAKTLKEMGEEVFQFDAPEAMLRDKF 387
++F+ F E+ L++ G LP ++ L + + GE+ +F P+ + K
Sbjct: 298 PREFDSFDEVHGLYS-GGIKLPTDIISKISPLPVLKEIFRTDGEQALKFPPPKVIQVSKS 356
Query: 388 FWFRDEEFARQTLAGLNPCSIQLITEWPLKSSLDPKIYGPRLQESEITKDIIEKELGAMI 447
W DEEFAR+ LAG+NP I+ + ++P +S LD ++YG S+ITK+ +E L +
Sbjct: 357 AWMTDEEFAREMLAGVNPNLIRCLKDFPPRSKLDSQVYGD--HTSQITKEHLEPNLEGL- 413
Query: 448 SVEEAIEQKKLFMLDYHDLFLPYVEKVRKLEHTTLYGSRTVFFLTPDNTLRPLAIELT-- 505
+V+EAI+ K+LF+LD+HD +PY+ ++ T Y +RT+ FL D TLRPLAIEL+
Sbjct: 414 TVDEAIQNKRLFLLDHHDPIMPYLRRINATS-TKAYATRTILFLKNDGTLRPLAIELSLP 472
Query: 506 RPPMDDKPLWRKVYTPGSWNSTKTWLWRLAKAHVLAHDSGYHQLVSHWLRSHCVVEPYII 565
P D + +V+ P ++ +W LAKA+V+ +DS YHQLVSHWL +H VVEP+II
Sbjct: 473 HPQGDQSGAFSQVFLPAD-EGVESSIWLLAKAYVVVNDSCYHQLVSHWLNTHAVVEPFII 531
Query: 566 ATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGGVIENTFSPGEYCMEMSSVIYD 625
ATNR LSV+HPIY+LLHPH R T+ +N + R L++ GGVIE TF G Y +EMS+V+Y
Sbjct: 532 ATNRHLSVVHPIYKLLHPHYRDTMNINGLARLSLVNDGGVIEQTFLWGRYSVEMSAVVY- 590
Query: 626 KQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLDLWGILKQWVTDYVNH 685
K W F +QALP DL+KRGMA+EDP+ HG++L I+DYP+ DGL++W +K WV +YV
Sbjct: 591 KDWVFTDQALPADLIKRGMAIEDPSCPHGIRLVIEDYPYTVDGLEIWDAIKTWVHEYVFL 650
Query: 686 YYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLKTPQNLIEILTTIIWVASGHHA 745
YY + D ELQA W E+ VGH DKK+EPWWP ++T + L+E IIW AS HA
Sbjct: 651 YYKSDDTLREDPELQACWKELVEVGHGDKKNEPWWPKMQTREELVEACAIIIWTASALHA 710
Query: 746 AVNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIA 805
AVNFGQY Y NRPT++R MP++ E ++ + P+ A L T + Q ++ ++
Sbjct: 711 AVNFGQYPYGGLILNRPTLSRRFMPEKGSAE--YEELRKNPQKAYLKTITPKFQTLIDLS 768
Query: 806 TLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFEKFSGRLMELEGIIDERNGDSTLVNRN 865
+++LS H+ DE +LG+ P W D AF++F +L ++E + ERN D L NR
Sbjct: 769 VIEILSRHASDEVYLGERDNPNWTSDTRALEAFKRFGNKLAQIENKLSERNNDEKLRNRC 828
Query: 866 GAGVVPYNLLKPYWKDGDKEKGVPYSISI 894
G +PY LL P K+G +G+P SISI
Sbjct: 829 GPVQMPYTLLLPSSKEGLTFRGIPNSISI 857
>pdb|2IUK|A Chain A, Crystal Structure Of Soybean Lipoxygenase-D
pdb|2IUK|B Chain B, Crystal Structure Of Soybean Lipoxygenase-D
Length = 864
Score = 637 bits (1642), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/837 (41%), Positives = 493/837 (58%), Gaps = 31/837 (3%)
Query: 71 KSVSVINAVVTVKATWKDDYEDYLFGRTLRLELVSAELDHTTGSEKST----IYAHASKA 126
+ VS++ V+ D GR + ++L+SA +G+ K + H
Sbjct: 46 QGVSLVGGVI--------DTATSFLGRNISMQLISATQTDGSGNGKVGKEVYLEKHLPTL 97
Query: 127 GKDKHGNELYEATFNVPSDFGEVGAMSVENEHHVEIYLMNIVLDGFSNGDPVNITCNSWI 186
+ + F + FG GA ++N E +L+++ L+ N + CNSW+
Sbjct: 98 PTLGARQDAFSIFFEWDASFGIPGAFYIKNFMTDEFFLVSVKLEDIPNHGTIEFVCNSWV 157
Query: 187 QPKNKNEPKRIFFTNKSYLPSQTPDGLKRFRIEELYHLRGHGQGVRQPSDRIYDYDVYND 246
+ RIFF N +YLPS TP L ++R EE LRG G G R+ DRIYDYDVYND
Sbjct: 158 YNFRSYKKNRIFFVNDTYLPSATPAPLLKYRKEEFEVLRGDGTGKRKDFDRIYDYDVYND 217
Query: 247 LGNPDKR--RPVLGGKK-FPYPRRCRTGRQHYESDPLKEKRDKYIYVPRDETFSDVKQEA 303
LGNPD RP+LGG +PYP R RTGR+ +DP EK + +YVPRDE F +K
Sbjct: 218 LGNPDGGDPRPILGGCSIYPYPLRVRTGRERTRTDPNSEKPGE-VYVPRDENFGHLKSSD 276
Query: 304 FDNMKDYKSMCHAALPY----IEKFFDGDKKFEYFTEIDELFNEDGFSLPEAEPGFLNSL 359
F KS+ H +P I + +FE F ++ L+ E G LP ++ L
Sbjct: 277 FLTY-GIKSLSHDVIPLFKSAIFQLRVTSSEFESFEDVRSLY-EGGIKLPTDILSQISPL 334
Query: 360 ARFAKTLKEMGEEVFQFDAPEAMLRDKFFWFRDEEFARQTLAGLNPCSIQLITEWPLKSS 419
+ + GE V QF P K DEEFAR+ +AG+NP I+ + E+P KS+
Sbjct: 335 PALKEIFRTDGENVLQFPPPHVAKVSKSGVMTDEEFAREVIAGVNPNVIRRLQEFPPKST 394
Query: 420 LDPKIYGPRLQESEITKDIIEKELGAMISVEEAIEQKKLFMLDYHDLFLPYVEKVRKLEH 479
LDP +YG Q S ITK+ +E +G ++VEEA+ ++LF+LDY D F+PY+ ++ L
Sbjct: 395 LDPTLYGD--QTSTITKEQLEINMGG-VTVEEALSTQRLFILDYQDAFIPYLTRINSLPT 451
Query: 480 TTLYGSRTVFFLTPDNTLRPLAIELTRPPMDDKPLWRK--VYTPGSWNSTKTWLWRLAKA 537
Y +RT+ FL D TL+PLAIEL++P D L + V P + T +W LAKA
Sbjct: 452 AKAYATRTILFLKDDGTLKPLAIELSKPHPDGDNLGPESIVVLPATEGVDST-IWLLAKA 510
Query: 538 HVLAHDSGYHQLVSHWLRSHCVVEPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRD 597
HV+ +DSGYHQLVSHWL +H V+EP+ IATNR LSV+HPIY+LL+PH R T+ +N + R
Sbjct: 511 HVIVNDSGYHQLVSHWLNTHAVMEPFAIATNRHLSVLHPIYKLLYPHYRDTININGLARQ 570
Query: 598 ILISAGGVIENTFSPGEYCMEMSSVIYDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKL 657
LI+A G+IE +F PG+Y +EMSS +Y K W F QALP DL+KRG+A+EDP+A HGL+L
Sbjct: 571 SLINADGIIEKSFLPGKYSIEMSSSVY-KNWVFTHQALPADLVKRGLAIEDPSAPHGLRL 629
Query: 658 TIDDYPFAKDGLDLWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVGHADKKDE 717
I+DYP+A DGL++W +K WV +YV+ YYP + V+ D ELQAWW E GH D K++
Sbjct: 630 VIEDYPYAVDGLEIWDAIKTWVHEYVSLYYPTDAAVQQDTELQAWWKEAVEKGHGDLKEK 689
Query: 718 PWWPVLKTPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFPNRPTIARVNMPDEDPTEK 777
PWWP +T ++LI+ + I+W AS HAAVNFGQY Y NRPT+AR +P E E
Sbjct: 690 PWWPKKQTTEDLIQSCSIIVWTASALHAAVNFGQYPYGGLILNRPTLARRFIPAEGTPE- 748
Query: 778 FWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAA 837
+ ++ P+ A L T + + ++ ++ +++LS H+ DE +LG+ + P W D A
Sbjct: 749 -YDEMVKNPQKAYLRTITPKFETLIDLSVIEILSRHASDEIYLGERETPNWTTDKKALEA 807
Query: 838 FEKFSGRLMELEGIIDERNGDSTLVNRNGAGVVPYNLLKPYWKDGDKEKGVPYSISI 894
F++F +L +EG I+ RN D +L NR G +PY LL ++G KG+P SISI
Sbjct: 808 FKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLLHRSSEEGLTFKGIPNSISI 864
>pdb|1ROV|A Chain A, Lipoxygenase-3 Treated With Cumene Hydroperoxide
Length = 857
Score = 634 bits (1634), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/869 (40%), Positives = 507/869 (58%), Gaps = 31/869 (3%)
Query: 40 LKIGSKVRVSCHSKRHNVSSKNIEAIATSTEKSVSVINAVVTVKATWKDDYEDYLFGRTL 99
L G K++ + R NV N S +I + + + D +L GR++
Sbjct: 6 LHRGHKIKGTVVLMRKNVLDVN------SVTSVGGIIGQGLDLVGSTLDTLTAFL-GRSV 58
Query: 100 RLELVSAELDHTTGSEK----STIYAHASKAGKDKHGNELYEATFNVPSDFGEVGAMSVE 155
L+L+SA G K + + + G ++ F G GA ++
Sbjct: 59 SLQLISATKADANGKGKLGKATFLEGIITSLPTLGAGQSAFKINFEWDDGSGIPGAFYIK 118
Query: 156 NEHHVEIYLMNIVLDGFSNGDPVNITCNSWIQPKNKNEPKRIFFTNKSYLPSQTPDGLKR 215
N E +L+++ L+ N ++ CNSWI + RIFF N++YLPS+TP L +
Sbjct: 119 NFMQTEFFLVSLTLEDIPNHGSIHFVCNSWIYNAKLFKSDRIFFANQTYLPSETPAPLVK 178
Query: 216 FRIEELYHLRGHGQGVRQPSDRIYDYDVYNDLGNPDK----RRPVLGGK-KFPYPRRCRT 270
+R EEL++LRG G G R+ +RIYDYDVYNDLG+PDK RPVLGG FPYPRR RT
Sbjct: 179 YREEELHNLRGDGTGERKEWERIYDYDVYNDLGDPDKGENHARPVLGGNDTFPYPRRGRT 238
Query: 271 GRQHYESDPLKEKRDKYIYVPRDETFSDVKQEAFDNMKDYKSMCHAALPYIEKFFDGD-- 328
GR+ DP E R +Y+PRDE F +K F KS+ LP ++ FD +
Sbjct: 239 GRKPTRKDPNSESRSNDVYLPRDEAFGHLKSSDFLTY-GLKSVSQNVLPLLQSAFDLNFT 297
Query: 329 -KKFEYFTEIDELFNEDGFSLPEAEPGFLNSLARFAKTLKEMGEEVFQFDAPEAMLRDKF 387
++F+ F E+ L++ G LP ++ L + + GE+ +F P+ + K
Sbjct: 298 PREFDSFDEVHGLYS-GGIKLPTDIISKISPLPVLKEIFRTDGEQALKFPPPKVIQVSKS 356
Query: 388 FWFRDEEFARQTLAGLNPCSIQLITEWPLKSSLDPKIYGPRLQESEITKDIIEKELGAMI 447
W DEEFAR+ LAG+NP I+ + ++P +S LD ++YG S+ITK+ +E L +
Sbjct: 357 AWMTDEEFAREMLAGVNPNLIRCLKDFPPRSKLDSQVYGD--HTSQITKEHLEPNLEGL- 413
Query: 448 SVEEAIEQKKLFMLDYHDLFLPYVEKVRKLEHTTLYGSRTVFFLTPDNTLRPLAIELT-- 505
+V+EAI+ K+LF+LD+HD +PY+ ++ T Y +RT+ FL D TLRPLAIEL+
Sbjct: 414 TVDEAIQNKRLFLLDHHDPIMPYLRRINATS-TKAYATRTILFLKNDGTLRPLAIELSLP 472
Query: 506 RPPMDDKPLWRKVYTPGSWNSTKTWLWRLAKAHVLAHDSGYHQLVSHWLRSHCVVEPYII 565
P D + +V+ P ++ +W LAKA+V+ +DS YHQLVSH L +H VVEP+II
Sbjct: 473 HPQGDQSGAFSQVFLPAD-EGVESSIWLLAKAYVVVNDSCYHQLVSHXLNTHAVVEPFII 531
Query: 566 ATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGGVIENTFSPGEYCMEMSSVIYD 625
ATNR LSV+HPIY+LLHPH R T+ +N + R ++ GGVIE TF G Y +EMS+V+Y
Sbjct: 532 ATNRHLSVVHPIYKLLHPHYRDTMNINGLARLSXVNDGGVIEQTFLWGRYSVEMSAVVY- 590
Query: 626 KQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLDLWGILKQWVTDYVNH 685
K W F +QALP DL+KRGMA+EDP+ HG++L I+DYP+ DGL++W +K WV +YV
Sbjct: 591 KDWVFTDQALPADLIKRGMAIEDPSCPHGIRLVIEDYPYTVDGLEIWDAIKTWVHEYVFL 650
Query: 686 YYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLKTPQNLIEILTTIIWVASGHHA 745
YY + D ELQA W E+ VGH DKK+EPWWP ++T + L+E IIW AS HA
Sbjct: 651 YYKSDDTLREDPELQACWKELVEVGHGDKKNEPWWPKMQTREELVEACAIIIWTASALHA 710
Query: 746 AVNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIA 805
AVNFGQY Y NRPT++R MP++ E ++ + P+ A L T + Q ++ ++
Sbjct: 711 AVNFGQYPYGGLILNRPTLSRRFMPEKGSAE--YEELRKNPQKAYLKTITPKFQTLIDLS 768
Query: 806 TLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFEKFSGRLMELEGIIDERNGDSTLVNRN 865
+++LS H+ DE +LG+ P W D AF++F +L ++E + ERN D L NR
Sbjct: 769 VIEILSRHASDEVYLGERDNPNWTSDTRALEAFKRFGNKLAQIENKLSERNNDEKLRNRC 828
Query: 866 GAGVVPYNLLKPYWKDGDKEKGVPYSISI 894
G +PY LL P K+G +G+P SISI
Sbjct: 829 GPVQMPYTLLLPSSKEGLTFRGIPNSISI 857
>pdb|3PZW|A Chain A, Soybean Lipoxygenase-1 - Re-Refinement
Length = 839
Score = 627 bits (1617), Expect = e-180, Method: Compositional matrix adjust.
Identities = 344/831 (41%), Positives = 485/831 (58%), Gaps = 46/831 (5%)
Query: 89 DYEDYLFGRTLRLELVSAELDHTTGSEKSTIYAHASKAGKDKH-------------GNEL 135
D + GR++ L+L+SA G K GKD G
Sbjct: 30 DNLNAFLGRSVSLQLISATKADAHGK---------GKVGKDTFLEGINTSLPTLGAGESA 80
Query: 136 YEATFNVPSDFGEVGAMSVENEHHVEIYLMNIVLDGFSNGDPVNITCNSWIQPKNKNEPK 195
+ F G GA ++N VE +L ++ L+ SN + CNSW+ +
Sbjct: 81 FNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSV 140
Query: 196 RIFFTNKSYLPSQTPDGLKRFRIEELYHLRGHGQGVRQPSDRIYDYDVYNDLGNPDKR-- 253
RIFF N +Y+PS+TP L +R EEL LRG+G G R+ DRIYDYDVYNDLGNPDK
Sbjct: 141 RIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEK 200
Query: 254 --RPVLGGKK-FPYPRRCRTGRQHYESDPLKEKRDKYIYVPRDETFSDVKQEAFDNMK-D 309
RPVLGG FPYPRR RTGR +DP EK+ + YVPRDE +K + D ++
Sbjct: 201 LARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSK--DALEIG 258
Query: 310 YKSMCHAALPYIEKFFDGDK---KFEYFTEIDELFNEDGFSLPEAEPGFLNSLARFAKTL 366
KS+ P E FD +F F ++ +L+ E G LP + L +
Sbjct: 259 TKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLY-EGGIKLPRDVISTIIPLPVIKELY 317
Query: 367 KEMGEEVFQFDAPEAMLRDKFFWFRDEEFARQTLAGLNPCSIQLITEWPLKSSLDPKIYG 426
+ G+ + +F P + + W DEEFAR+ +AG+NPC I+ + E+P KS+LDP IYG
Sbjct: 318 RTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYG 377
Query: 427 PRLQESEITKDIIEKELGAMISVEEAIEQKKLFMLDYHDLFLPYVEKVRKLEHTTLYGSR 486
Q S+IT D ++ + M +EA+ ++LFMLDYHD+F+PYV ++ +L Y +R
Sbjct: 378 D--QSSKITADSLDLDGYTM---DEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATR 432
Query: 487 TVFFLTPDNTLRPLAIELTRP--PMDDKPLWRKVYTPGSWNSTKTWLWRLAKAHVLAHDS 544
T+ FL D TL+P+AIEL+ P D +V P ++ +W LAKA+V+ +DS
Sbjct: 433 TILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAK-EGVESTIWLLAKAYVIVNDS 491
Query: 545 GYHQLVSHWLRSHCVVEPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGG 604
YHQL+SHWL +H +EP++IAT+R LSV+HPIY+LL PH R + +NA+ R LI+A G
Sbjct: 492 CYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANG 551
Query: 605 VIENTFSPGEYCMEMSSVIYDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPF 664
+IE TF P +Y +EMSS +Y K W F +QALP DL+KRG+A++DP+ HG++L I+DYP+
Sbjct: 552 IIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPY 610
Query: 665 AKDGLDLWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLK 724
A DGL++W +K WV +YV YY V++D ELQ WW E GH D KD+PWWP L+
Sbjct: 611 AADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQ 670
Query: 725 TPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIE 784
T ++L+E+ IIW+AS HAAVNFGQY Y NRPT +R +P++ E ++ I
Sbjct: 671 TLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPE--YEEMIN 728
Query: 785 KPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFEKFSGR 844
E A L T ++ ++ ++ +++LSTH+ DE +LG+ P W D AF+KF +
Sbjct: 729 NHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNK 788
Query: 845 LMELEGIIDERNGDSTLV-NRNGAGVVPYNLLKPYWKDGDKEKGVPYSISI 894
L E+E + RN D +L NR G +PY LL P ++G +G+P SISI
Sbjct: 789 LKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|2SBL|B Chain B, The Three-Dimensional Structure Of An Arachidonic Acid 15-
Lipoxygenase
pdb|1F8N|A Chain A, Lipoxygenase-1 (Soybean) At 100k, New Refinement
pdb|1YGE|A Chain A, Lipoxygenase-1 (Soybean) At 100k
pdb|2SBL|A Chain A, The Three-Dimensional Structure Of An Arachidonic Acid 15-
Lipoxygenase
Length = 839
Score = 627 bits (1617), Expect = e-180, Method: Compositional matrix adjust.
Identities = 344/831 (41%), Positives = 485/831 (58%), Gaps = 46/831 (5%)
Query: 89 DYEDYLFGRTLRLELVSAELDHTTGSEKSTIYAHASKAGKDKH-------------GNEL 135
D + GR++ L+L+SA G K GKD G
Sbjct: 30 DNLNAFLGRSVSLQLISATKADAHGK---------GKVGKDTFLEGINTSLPTLGAGESA 80
Query: 136 YEATFNVPSDFGEVGAMSVENEHHVEIYLMNIVLDGFSNGDPVNITCNSWIQPKNKNEPK 195
+ F G GA ++N VE +L ++ L+ SN + CNSW+ +
Sbjct: 81 FNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSV 140
Query: 196 RIFFTNKSYLPSQTPDGLKRFRIEELYHLRGHGQGVRQPSDRIYDYDVYNDLGNPDKR-- 253
RIFF N +Y+PS+TP L +R EEL LRG+G G R+ DRIYDYDVYNDLGNPDK
Sbjct: 141 RIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEK 200
Query: 254 --RPVLGGKK-FPYPRRCRTGRQHYESDPLKEKRDKYIYVPRDETFSDVKQEAFDNMK-D 309
RPVLGG FPYPRR RTGR +DP EK+ + YVPRDE +K + D ++
Sbjct: 201 LARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSK--DALEIG 258
Query: 310 YKSMCHAALPYIEKFFDGDK---KFEYFTEIDELFNEDGFSLPEAEPGFLNSLARFAKTL 366
KS+ P E FD +F F ++ +L+ E G LP + L +
Sbjct: 259 TKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLY-EGGIKLPRDVISTIIPLPVIKELY 317
Query: 367 KEMGEEVFQFDAPEAMLRDKFFWFRDEEFARQTLAGLNPCSIQLITEWPLKSSLDPKIYG 426
+ G+ + +F P + + W DEEFAR+ +AG+NPC I+ + E+P KS+LDP IYG
Sbjct: 318 RTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYG 377
Query: 427 PRLQESEITKDIIEKELGAMISVEEAIEQKKLFMLDYHDLFLPYVEKVRKLEHTTLYGSR 486
Q S+IT D ++ + M +EA+ ++LFMLDYHD+F+PYV ++ +L Y +R
Sbjct: 378 D--QSSKITADSLDLDGYTM---DEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATR 432
Query: 487 TVFFLTPDNTLRPLAIELTRP--PMDDKPLWRKVYTPGSWNSTKTWLWRLAKAHVLAHDS 544
T+ FL D TL+P+AIEL+ P D +V P ++ +W LAKA+V+ +DS
Sbjct: 433 TILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAK-EGVESTIWLLAKAYVIVNDS 491
Query: 545 GYHQLVSHWLRSHCVVEPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGG 604
YHQL+SHWL +H +EP++IAT+R LSV+HPIY+LL PH R + +NA+ R LI+A G
Sbjct: 492 CYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANG 551
Query: 605 VIENTFSPGEYCMEMSSVIYDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPF 664
+IE TF P +Y +EMSS +Y K W F +QALP DL+KRG+A++DP+ HG++L I+DYP+
Sbjct: 552 IIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPY 610
Query: 665 AKDGLDLWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLK 724
A DGL++W +K WV +YV YY V++D ELQ WW E GH D KD+PWWP L+
Sbjct: 611 AADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQ 670
Query: 725 TPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIE 784
T ++L+E+ IIW+AS HAAVNFGQY Y NRPT +R +P++ E ++ I
Sbjct: 671 TLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPE--YEEMIN 728
Query: 785 KPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFEKFSGR 844
E A L T ++ ++ ++ +++LSTH+ DE +LG+ P W D AF+KF +
Sbjct: 729 NHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNK 788
Query: 845 LMELEGIIDERNGDSTLV-NRNGAGVVPYNLLKPYWKDGDKEKGVPYSISI 894
L E+E + RN D +L NR G +PY LL P ++G +G+P SISI
Sbjct: 789 LKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|3BND|A Chain A, Lipoxygenase-1 (Soybean), I553v Mutant
Length = 839
Score = 627 bits (1616), Expect = e-179, Method: Compositional matrix adjust.
Identities = 343/831 (41%), Positives = 485/831 (58%), Gaps = 46/831 (5%)
Query: 89 DYEDYLFGRTLRLELVSAELDHTTGSEKSTIYAHASKAGKDKH-------------GNEL 135
D + GR++ L+L+SA G K GKD G
Sbjct: 30 DNLNAFLGRSVSLQLISATKADAHGK---------GKVGKDTFLEGINTSLPTLGAGESA 80
Query: 136 YEATFNVPSDFGEVGAMSVENEHHVEIYLMNIVLDGFSNGDPVNITCNSWIQPKNKNEPK 195
+ F G GA ++N VE +L ++ L+ SN + CNSW+ +
Sbjct: 81 FNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSV 140
Query: 196 RIFFTNKSYLPSQTPDGLKRFRIEELYHLRGHGQGVRQPSDRIYDYDVYNDLGNPDKR-- 253
RIFF N +Y+PS+TP L +R EEL LRG+G G R+ DRIYDYDVYNDLGNPDK
Sbjct: 141 RIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEK 200
Query: 254 --RPVLGGKK-FPYPRRCRTGRQHYESDPLKEKRDKYIYVPRDETFSDVKQEAFDNMK-D 309
RPVLGG FPYPRR RTGR +DP EK+ + YVPRDE +K + D ++
Sbjct: 201 LARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSK--DALEIG 258
Query: 310 YKSMCHAALPYIEKFFDGDK---KFEYFTEIDELFNEDGFSLPEAEPGFLNSLARFAKTL 366
KS+ P E FD +F F ++ +L+ E G LP + L +
Sbjct: 259 TKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLY-EGGIKLPRDVISTIIPLPVIKELY 317
Query: 367 KEMGEEVFQFDAPEAMLRDKFFWFRDEEFARQTLAGLNPCSIQLITEWPLKSSLDPKIYG 426
+ G+ + +F P + + W DEEFAR+ +AG+NPC I+ + E+P KS+LDP IYG
Sbjct: 318 RTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYG 377
Query: 427 PRLQESEITKDIIEKELGAMISVEEAIEQKKLFMLDYHDLFLPYVEKVRKLEHTTLYGSR 486
Q S+IT D ++ + M +EA+ ++LFMLDYHD+F+PYV ++ +L Y +R
Sbjct: 378 D--QSSKITADSLDLDGYTM---DEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATR 432
Query: 487 TVFFLTPDNTLRPLAIELTRP--PMDDKPLWRKVYTPGSWNSTKTWLWRLAKAHVLAHDS 544
T+ FL D TL+P+AIEL+ P D +V P ++ +W LAKA+V+ +DS
Sbjct: 433 TILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAK-EGVESTIWLLAKAYVIVNDS 491
Query: 545 GYHQLVSHWLRSHCVVEPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGG 604
YHQL+SHWL +H +EP++IAT+R LSV+HPIY+LL PH R + +NA+ R LI+A G
Sbjct: 492 CYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANG 551
Query: 605 VIENTFSPGEYCMEMSSVIYDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPF 664
++E TF P +Y +EMSS +Y K W F +QALP DL+KRG+A++DP+ HG++L I+DYP+
Sbjct: 552 IVETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPY 610
Query: 665 AKDGLDLWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLK 724
A DGL++W +K WV +YV YY V++D ELQ WW E GH D KD+PWWP L+
Sbjct: 611 AADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQ 670
Query: 725 TPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIE 784
T ++L+E+ IIW+AS HAAVNFGQY Y NRPT +R +P++ E ++ I
Sbjct: 671 TLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPE--YEEMIN 728
Query: 785 KPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFEKFSGR 844
E A L T ++ ++ ++ +++LSTH+ DE +LG+ P W D AF+KF +
Sbjct: 729 NHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNK 788
Query: 845 LMELEGIIDERNGDSTLV-NRNGAGVVPYNLLKPYWKDGDKEKGVPYSISI 894
L E+E + RN D +L NR G +PY LL P ++G +G+P SISI
Sbjct: 789 LKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|3BNB|A Chain A, Lipoxygenase-1 (Soybean) I553l Mutant
Length = 839
Score = 626 bits (1614), Expect = e-179, Method: Compositional matrix adjust.
Identities = 343/831 (41%), Positives = 485/831 (58%), Gaps = 46/831 (5%)
Query: 89 DYEDYLFGRTLRLELVSAELDHTTGSEKSTIYAHASKAGKDKH-------------GNEL 135
D + GR++ L+L+SA G K GKD G
Sbjct: 30 DNLNAFLGRSVSLQLISATKADAHGK---------GKVGKDTFLEGINTSLPTLGAGESA 80
Query: 136 YEATFNVPSDFGEVGAMSVENEHHVEIYLMNIVLDGFSNGDPVNITCNSWIQPKNKNEPK 195
+ F G GA ++N VE +L ++ L+ SN + CNSW+ +
Sbjct: 81 FNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSV 140
Query: 196 RIFFTNKSYLPSQTPDGLKRFRIEELYHLRGHGQGVRQPSDRIYDYDVYNDLGNPDKR-- 253
RIFF N +Y+PS+TP L +R EEL LRG+G G R+ DRIYDYDVYNDLGNPDK
Sbjct: 141 RIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEK 200
Query: 254 --RPVLGGKK-FPYPRRCRTGRQHYESDPLKEKRDKYIYVPRDETFSDVKQEAFDNMK-D 309
RPVLGG FPYPRR RTGR +DP EK+ + YVPRDE +K + D ++
Sbjct: 201 LARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSK--DALEIG 258
Query: 310 YKSMCHAALPYIEKFFDGDK---KFEYFTEIDELFNEDGFSLPEAEPGFLNSLARFAKTL 366
KS+ P E FD +F F ++ +L+ E G LP + L +
Sbjct: 259 TKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLY-EGGIKLPRDVISTIIPLPVIKELY 317
Query: 367 KEMGEEVFQFDAPEAMLRDKFFWFRDEEFARQTLAGLNPCSIQLITEWPLKSSLDPKIYG 426
+ G+ + +F P + + W DEEFAR+ +AG+NPC I+ + E+P KS+LDP IYG
Sbjct: 318 RTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYG 377
Query: 427 PRLQESEITKDIIEKELGAMISVEEAIEQKKLFMLDYHDLFLPYVEKVRKLEHTTLYGSR 486
Q S+IT D ++ + M +EA+ ++LFMLDYHD+F+PYV ++ +L Y +R
Sbjct: 378 D--QSSKITADSLDLDGYTM---DEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATR 432
Query: 487 TVFFLTPDNTLRPLAIELTRP--PMDDKPLWRKVYTPGSWNSTKTWLWRLAKAHVLAHDS 544
T+ FL D TL+P+AIEL+ P D +V P ++ +W LAKA+V+ +DS
Sbjct: 433 TILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAK-EGVESTIWLLAKAYVIVNDS 491
Query: 545 GYHQLVSHWLRSHCVVEPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGG 604
YHQL+SHWL +H +EP++IAT+R LSV+HPIY+LL PH R + +NA+ R LI+A G
Sbjct: 492 CYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANG 551
Query: 605 VIENTFSPGEYCMEMSSVIYDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPF 664
++E TF P +Y +EMSS +Y K W F +QALP DL+KRG+A++DP+ HG++L I+DYP+
Sbjct: 552 ILETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPY 610
Query: 665 AKDGLDLWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLK 724
A DGL++W +K WV +YV YY V++D ELQ WW E GH D KD+PWWP L+
Sbjct: 611 AADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQ 670
Query: 725 TPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIE 784
T ++L+E+ IIW+AS HAAVNFGQY Y NRPT +R +P++ E ++ I
Sbjct: 671 TLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPE--YEEMIN 728
Query: 785 KPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFEKFSGR 844
E A L T ++ ++ ++ +++LSTH+ DE +LG+ P W D AF+KF +
Sbjct: 729 NHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNK 788
Query: 845 LMELEGIIDERNGDSTLV-NRNGAGVVPYNLLKPYWKDGDKEKGVPYSISI 894
L E+E + RN D +L NR G +PY LL P ++G +G+P SISI
Sbjct: 789 LKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1FGR|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant
Length = 839
Score = 625 bits (1613), Expect = e-179, Method: Compositional matrix adjust.
Identities = 343/831 (41%), Positives = 485/831 (58%), Gaps = 46/831 (5%)
Query: 89 DYEDYLFGRTLRLELVSAELDHTTGSEKSTIYAHASKAGKDKH-------------GNEL 135
D + GR++ L+L+SA G K GKD G
Sbjct: 30 DNLNAFLGRSVSLQLISATKADAHGK---------GKVGKDTFLEGINTSLPTLGAGESA 80
Query: 136 YEATFNVPSDFGEVGAMSVENEHHVEIYLMNIVLDGFSNGDPVNITCNSWIQPKNKNEPK 195
+ F G GA ++N VE +L ++ L+ SN + CNSW+ +
Sbjct: 81 FNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSV 140
Query: 196 RIFFTNKSYLPSQTPDGLKRFRIEELYHLRGHGQGVRQPSDRIYDYDVYNDLGNPDKR-- 253
RIFF N +Y+PS+TP L +R EEL LRG+G G R+ DRIYDYDVYNDLGNPDK
Sbjct: 141 RIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEK 200
Query: 254 --RPVLGGKK-FPYPRRCRTGRQHYESDPLKEKRDKYIYVPRDETFSDVKQEAFDNMK-D 309
RPVLGG FPYPRR RTGR +DP EK+ + YVPRDE +K + D ++
Sbjct: 201 LARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSK--DALEIG 258
Query: 310 YKSMCHAALPYIEKFFDGDK---KFEYFTEIDELFNEDGFSLPEAEPGFLNSLARFAKTL 366
KS+ P E FD +F F ++ +L+ E G LP + L +
Sbjct: 259 TKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLY-EGGIKLPRDVISTIIPLPVIKELY 317
Query: 367 KEMGEEVFQFDAPEAMLRDKFFWFRDEEFARQTLAGLNPCSIQLITEWPLKSSLDPKIYG 426
+ G+ + +F P + + W DEEFAR+ +AG+NPC I+ + E+P KS+LDP IYG
Sbjct: 318 RTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYG 377
Query: 427 PRLQESEITKDIIEKELGAMISVEEAIEQKKLFMLDYHDLFLPYVEKVRKLEHTTLYGSR 486
Q S+IT D ++ + M +EA+ ++LFMLDYHD+F+PYV ++ +L Y +R
Sbjct: 378 D--QSSKITADSLDLDGYTM---DEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATR 432
Query: 487 TVFFLTPDNTLRPLAIELTRP--PMDDKPLWRKVYTPGSWNSTKTWLWRLAKAHVLAHDS 544
T+ FL D TL+P+AIEL+ P D +V P ++ +W LAKA+V+ +DS
Sbjct: 433 TILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAK-EGVESTIWLLAKAYVIVNDS 491
Query: 545 GYHQLVSHWLRSHCVVEPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGG 604
YHQL+SHWL +H +EP++IAT+R LSV+HPIY+LL PH R + +NA+ R LI+A G
Sbjct: 492 CYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANG 551
Query: 605 VIENTFSPGEYCMEMSSVIYDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPF 664
+IE TF P +Y +EMSS +Y K W F +QALP DL+KRG+A++DP+ HG++L I+DYP+
Sbjct: 552 IIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPY 610
Query: 665 AKDGLDLWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLK 724
A DGL++W +K WV +YV YY V++D ELQ WW E GH D KD+PWWP L+
Sbjct: 611 AADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQ 670
Query: 725 TPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIE 784
T ++L+E+ IIW+AS HAAVNFG+Y Y NRPT +R +P++ E ++ I
Sbjct: 671 TLEDLVEVCLIIIWIASALHAAVNFGEYPYGGLIMNRPTASRRLLPEKGTPE--YEEMIN 728
Query: 785 KPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFEKFSGR 844
E A L T ++ ++ ++ +++LSTH+ DE +LG+ P W D AF+KF +
Sbjct: 729 NHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNK 788
Query: 845 LMELEGIIDERNGDSTLV-NRNGAGVVPYNLLKPYWKDGDKEKGVPYSISI 894
L E+E + RN D +L NR G +PY LL P ++G +G+P SISI
Sbjct: 789 LKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1FGQ|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant
Length = 839
Score = 625 bits (1613), Expect = e-179, Method: Compositional matrix adjust.
Identities = 343/831 (41%), Positives = 485/831 (58%), Gaps = 46/831 (5%)
Query: 89 DYEDYLFGRTLRLELVSAELDHTTGSEKSTIYAHASKAGKDKH-------------GNEL 135
D + GR++ L+L+SA G K GKD G
Sbjct: 30 DNLNAFLGRSVSLQLISATKADAHGK---------GKVGKDTFLEGINTSLPTLGAGESA 80
Query: 136 YEATFNVPSDFGEVGAMSVENEHHVEIYLMNIVLDGFSNGDPVNITCNSWIQPKNKNEPK 195
+ F G GA ++N VE +L ++ L+ SN + CNSW+ +
Sbjct: 81 FNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSV 140
Query: 196 RIFFTNKSYLPSQTPDGLKRFRIEELYHLRGHGQGVRQPSDRIYDYDVYNDLGNPDKR-- 253
RIFF N +Y+PS+TP L +R EEL LRG+G G R+ DRIYDYDVYNDLGNPDK
Sbjct: 141 RIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEK 200
Query: 254 --RPVLGGKK-FPYPRRCRTGRQHYESDPLKEKRDKYIYVPRDETFSDVKQEAFDNMK-D 309
RPVLGG FPYPRR RTGR +DP EK+ + YVPRDE +K + D ++
Sbjct: 201 LARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSK--DALEIG 258
Query: 310 YKSMCHAALPYIEKFFDGDK---KFEYFTEIDELFNEDGFSLPEAEPGFLNSLARFAKTL 366
KS+ P E FD +F F ++ +L+ E G LP + L +
Sbjct: 259 TKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLY-EGGIKLPRDVISTIIPLPVIKELY 317
Query: 367 KEMGEEVFQFDAPEAMLRDKFFWFRDEEFARQTLAGLNPCSIQLITEWPLKSSLDPKIYG 426
+ G+ + +F P + + W DEEFAR+ +AG+NPC I+ + E+P KS+LDP IYG
Sbjct: 318 RTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYG 377
Query: 427 PRLQESEITKDIIEKELGAMISVEEAIEQKKLFMLDYHDLFLPYVEKVRKLEHTTLYGSR 486
Q S+IT D ++ + M +EA+ ++LFMLDYHD+F+PYV ++ +L Y +R
Sbjct: 378 D--QSSKITADSLDLDGYTM---DEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATR 432
Query: 487 TVFFLTPDNTLRPLAIELTRP--PMDDKPLWRKVYTPGSWNSTKTWLWRLAKAHVLAHDS 544
T+ FL D TL+P+AIEL+ P D +V P ++ +W LAKA+V+ +DS
Sbjct: 433 TILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAK-EGVESTIWLLAKAYVIVNDS 491
Query: 545 GYHQLVSHWLRSHCVVEPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGG 604
YH+L+SHWL +H +EP++IAT+R LSV+HPIY+LL PH R + +NA+ R LI+A G
Sbjct: 492 CYHELMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANG 551
Query: 605 VIENTFSPGEYCMEMSSVIYDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPF 664
+IE TF P +Y +EMSS +Y K W F +QALP DL+KRG+A++DP+ HG++L I+DYP+
Sbjct: 552 IIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPY 610
Query: 665 AKDGLDLWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLK 724
A DGL++W +K WV +YV YY V++D ELQ WW E GH D KD+PWWP L+
Sbjct: 611 AADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQ 670
Query: 725 TPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIE 784
T ++L+E+ IIW+AS HAAVNFGQY Y NRPT +R +P++ E ++ I
Sbjct: 671 TLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPE--YEEMIN 728
Query: 785 KPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFEKFSGR 844
E A L T ++ ++ ++ +++LSTH+ DE +LG+ P W D AF+KF +
Sbjct: 729 NHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNK 788
Query: 845 LMELEGIIDERNGDSTLV-NRNGAGVVPYNLLKPYWKDGDKEKGVPYSISI 894
L E+E + RN D +L NR G +PY LL P ++G +G+P SISI
Sbjct: 789 LKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1FGM|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694h Mutant
Length = 839
Score = 625 bits (1612), Expect = e-179, Method: Compositional matrix adjust.
Identities = 343/831 (41%), Positives = 485/831 (58%), Gaps = 46/831 (5%)
Query: 89 DYEDYLFGRTLRLELVSAELDHTTGSEKSTIYAHASKAGKDKH-------------GNEL 135
D + GR++ L+L+SA G K GKD G
Sbjct: 30 DNLNAFLGRSVSLQLISATKADAHGK---------GKVGKDTFLEGINTSLPTLGAGESA 80
Query: 136 YEATFNVPSDFGEVGAMSVENEHHVEIYLMNIVLDGFSNGDPVNITCNSWIQPKNKNEPK 195
+ F G GA ++N VE +L ++ L+ SN + CNSW+ +
Sbjct: 81 FNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSV 140
Query: 196 RIFFTNKSYLPSQTPDGLKRFRIEELYHLRGHGQGVRQPSDRIYDYDVYNDLGNPDKR-- 253
RIFF N +Y+PS+TP L +R EEL LRG+G G R+ DRIYDYDVYNDLGNPDK
Sbjct: 141 RIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEK 200
Query: 254 --RPVLGGKK-FPYPRRCRTGRQHYESDPLKEKRDKYIYVPRDETFSDVKQEAFDNMK-D 309
RPVLGG FPYPRR RTGR +DP EK+ + YVPRDE +K + D ++
Sbjct: 201 LARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSK--DALEIG 258
Query: 310 YKSMCHAALPYIEKFFDGDK---KFEYFTEIDELFNEDGFSLPEAEPGFLNSLARFAKTL 366
KS+ P E FD +F F ++ +L+ E G LP + L +
Sbjct: 259 TKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLY-EGGIKLPRDVISTIIPLPVIKELY 317
Query: 367 KEMGEEVFQFDAPEAMLRDKFFWFRDEEFARQTLAGLNPCSIQLITEWPLKSSLDPKIYG 426
+ G+ + +F P + + W DEEFAR+ +AG+NPC I+ + E+P KS+LDP IYG
Sbjct: 318 RTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYG 377
Query: 427 PRLQESEITKDIIEKELGAMISVEEAIEQKKLFMLDYHDLFLPYVEKVRKLEHTTLYGSR 486
Q S+IT D ++ + M +EA+ ++LFMLDYHD+F+PYV ++ +L Y +R
Sbjct: 378 D--QSSKITADSLDLDGYTM---DEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATR 432
Query: 487 TVFFLTPDNTLRPLAIELTRP--PMDDKPLWRKVYTPGSWNSTKTWLWRLAKAHVLAHDS 544
T+ FL D TL+P+AIEL+ P D +V P ++ +W LAKA+V+ +DS
Sbjct: 433 TILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAK-EGVESTIWLLAKAYVIVNDS 491
Query: 545 GYHQLVSHWLRSHCVVEPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGG 604
YHQL+SHWL +H +EP++IAT+R LSV+HPIY+LL PH R + +NA+ R LI+A G
Sbjct: 492 CYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANG 551
Query: 605 VIENTFSPGEYCMEMSSVIYDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPF 664
+IE TF P +Y +EMSS +Y K W F +QALP DL+KRG+A++DP+ HG++L I+DYP+
Sbjct: 552 IIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPY 610
Query: 665 AKDGLDLWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLK 724
A DGL++W +K WV +YV YY V++D ELQ WW E GH D KD+PWWP L+
Sbjct: 611 AADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQ 670
Query: 725 TPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIE 784
T ++L+E+ IIW+AS HAAV+FGQY Y NRPT +R +P++ E ++ I
Sbjct: 671 TLEDLVEVCLIIIWIASALHAAVHFGQYPYGGLIMNRPTASRRLLPEKGTPE--YEEMIN 728
Query: 785 KPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFEKFSGR 844
E A L T ++ ++ ++ +++LSTH+ DE +LG+ P W D AF+KF +
Sbjct: 729 NHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNK 788
Query: 845 LMELEGIIDERNGDSTLV-NRNGAGVVPYNLLKPYWKDGDKEKGVPYSISI 894
L E+E + RN D +L NR G +PY LL P ++G +G+P SISI
Sbjct: 789 LKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1Y4K|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694g Mutant
Length = 839
Score = 625 bits (1612), Expect = e-179, Method: Compositional matrix adjust.
Identities = 343/831 (41%), Positives = 484/831 (58%), Gaps = 46/831 (5%)
Query: 89 DYEDYLFGRTLRLELVSAELDHTTGSEKSTIYAHASKAGKDKH-------------GNEL 135
D + GR++ L+L+SA G K GKD G
Sbjct: 30 DNLNAFLGRSVSLQLISATKADAHGK---------GKVGKDTFLEGINTSLPTLGAGESA 80
Query: 136 YEATFNVPSDFGEVGAMSVENEHHVEIYLMNIVLDGFSNGDPVNITCNSWIQPKNKNEPK 195
+ F G GA ++N VE +L ++ L+ SN + CNSW+ +
Sbjct: 81 FNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSV 140
Query: 196 RIFFTNKSYLPSQTPDGLKRFRIEELYHLRGHGQGVRQPSDRIYDYDVYNDLGNPDKR-- 253
RIFF N +Y+PS+TP L +R EEL LRG+G G R+ DRIYDYDVYNDLGNPDK
Sbjct: 141 RIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEK 200
Query: 254 --RPVLGGKK-FPYPRRCRTGRQHYESDPLKEKRDKYIYVPRDETFSDVKQEAFDNMK-D 309
RPVLGG FPYPRR RTGR +DP EK+ + YVPRDE +K + D ++
Sbjct: 201 LARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSK--DALEIG 258
Query: 310 YKSMCHAALPYIEKFFDGDK---KFEYFTEIDELFNEDGFSLPEAEPGFLNSLARFAKTL 366
KS+ P E FD +F F ++ +L+ E G LP + L +
Sbjct: 259 TKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLY-EGGIKLPRDVISTIIPLPVIKELY 317
Query: 367 KEMGEEVFQFDAPEAMLRDKFFWFRDEEFARQTLAGLNPCSIQLITEWPLKSSLDPKIYG 426
+ G+ + +F P + + W DEEFAR+ +AG+NPC I+ + E+P KS+LDP IYG
Sbjct: 318 RTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYG 377
Query: 427 PRLQESEITKDIIEKELGAMISVEEAIEQKKLFMLDYHDLFLPYVEKVRKLEHTTLYGSR 486
Q S+IT D ++ + M +EA+ ++LFMLDYHD+F+PYV ++ +L Y +R
Sbjct: 378 D--QSSKITADSLDLDGYTM---DEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATR 432
Query: 487 TVFFLTPDNTLRPLAIELTRP--PMDDKPLWRKVYTPGSWNSTKTWLWRLAKAHVLAHDS 544
T+ FL D TL+P+AIEL+ P D +V P ++ +W LAKA+V+ +DS
Sbjct: 433 TILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAK-EGVESTIWLLAKAYVIVNDS 491
Query: 545 GYHQLVSHWLRSHCVVEPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGG 604
YHQL+SHWL +H +EP++IAT+R LSV+HPIY+LL PH R + +NA+ R LI+A G
Sbjct: 492 CYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANG 551
Query: 605 VIENTFSPGEYCMEMSSVIYDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPF 664
+IE TF P +Y +EMSS +Y K W F +QALP DL+KRG+A++DP+ HG++L I+DYP+
Sbjct: 552 IIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPY 610
Query: 665 AKDGLDLWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLK 724
A DGL++W +K WV +YV YY V++D ELQ WW E GH D KD+PWWP L+
Sbjct: 611 AADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQ 670
Query: 725 TPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIE 784
T ++L+E+ IIW+AS HAAV FGQY Y NRPT +R +P++ E ++ I
Sbjct: 671 TLEDLVEVCLIIIWIASALHAAVGFGQYPYGGLIMNRPTASRRLLPEKGTPE--YEEMIN 728
Query: 785 KPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFEKFSGR 844
E A L T ++ ++ ++ +++LSTH+ DE +LG+ P W D AF+KF +
Sbjct: 729 NHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNK 788
Query: 845 LMELEGIIDERNGDSTLV-NRNGAGVVPYNLLKPYWKDGDKEKGVPYSISI 894
L E+E + RN D +L NR G +PY LL P ++G +G+P SISI
Sbjct: 789 LKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|3BNE|A Chain A, Lipoxygenase-1 (Soybean) I553a Mutant
Length = 839
Score = 625 bits (1612), Expect = e-179, Method: Compositional matrix adjust.
Identities = 343/831 (41%), Positives = 484/831 (58%), Gaps = 46/831 (5%)
Query: 89 DYEDYLFGRTLRLELVSAELDHTTGSEKSTIYAHASKAGKDKH-------------GNEL 135
D + GR++ L+L+SA G K GKD G
Sbjct: 30 DNLNAFLGRSVSLQLISATKADAHGK---------GKVGKDTFLEGINTSLPTLGAGESA 80
Query: 136 YEATFNVPSDFGEVGAMSVENEHHVEIYLMNIVLDGFSNGDPVNITCNSWIQPKNKNEPK 195
+ F G GA ++N VE +L ++ L+ SN + CNSW+ +
Sbjct: 81 FNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSV 140
Query: 196 RIFFTNKSYLPSQTPDGLKRFRIEELYHLRGHGQGVRQPSDRIYDYDVYNDLGNPDKR-- 253
RIFF N +Y+PS+TP L +R EEL LRG+G G R+ DRIYDYDVYNDLGNPDK
Sbjct: 141 RIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEK 200
Query: 254 --RPVLGGKK-FPYPRRCRTGRQHYESDPLKEKRDKYIYVPRDETFSDVKQEAFDNMK-D 309
RPVLGG FPYPRR RTGR +DP EK+ + YVPRDE +K + D ++
Sbjct: 201 LARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSK--DALEIG 258
Query: 310 YKSMCHAALPYIEKFFDGDK---KFEYFTEIDELFNEDGFSLPEAEPGFLNSLARFAKTL 366
KS+ P E FD +F F ++ +L+ E G LP + L +
Sbjct: 259 TKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLY-EGGIKLPRDVISTIIPLPVIKELY 317
Query: 367 KEMGEEVFQFDAPEAMLRDKFFWFRDEEFARQTLAGLNPCSIQLITEWPLKSSLDPKIYG 426
+ G+ + +F P + + W DEEFAR+ +AG+NPC I+ + E+P KS+LDP IYG
Sbjct: 318 RTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYG 377
Query: 427 PRLQESEITKDIIEKELGAMISVEEAIEQKKLFMLDYHDLFLPYVEKVRKLEHTTLYGSR 486
Q S+IT D ++ + M +EA+ ++LFMLDYHD+F+PYV ++ +L Y +R
Sbjct: 378 D--QSSKITADSLDLDGYTM---DEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATR 432
Query: 487 TVFFLTPDNTLRPLAIELTRP--PMDDKPLWRKVYTPGSWNSTKTWLWRLAKAHVLAHDS 544
T+ FL D TL+P+AIEL+ P D +V P ++ +W LAKA+V+ +DS
Sbjct: 433 TILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAK-EGVESTIWLLAKAYVIVNDS 491
Query: 545 GYHQLVSHWLRSHCVVEPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGG 604
YHQL+SHWL +H +EP++IAT+R LSV+HPIY+LL PH R + +NA+ R LI+A G
Sbjct: 492 CYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANG 551
Query: 605 VIENTFSPGEYCMEMSSVIYDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPF 664
+ E TF P +Y +EMSS +Y K W F +QALP DL+KRG+A++DP+ HG++L I+DYP+
Sbjct: 552 IAETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPY 610
Query: 665 AKDGLDLWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLK 724
A DGL++W +K WV +YV YY V++D ELQ WW E GH D KD+PWWP L+
Sbjct: 611 AADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQ 670
Query: 725 TPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIE 784
T ++L+E+ IIW+AS HAAVNFGQY Y NRPT +R +P++ E ++ I
Sbjct: 671 TLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPE--YEEMIN 728
Query: 785 KPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFEKFSGR 844
E A L T ++ ++ ++ +++LSTH+ DE +LG+ P W D AF+KF +
Sbjct: 729 NHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNK 788
Query: 845 LMELEGIIDERNGDSTLV-NRNGAGVVPYNLLKPYWKDGDKEKGVPYSISI 894
L E+E + RN D +L NR G +PY LL P ++G +G+P SISI
Sbjct: 789 LKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1FGT|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant
Length = 839
Score = 625 bits (1611), Expect = e-179, Method: Compositional matrix adjust.
Identities = 343/831 (41%), Positives = 484/831 (58%), Gaps = 46/831 (5%)
Query: 89 DYEDYLFGRTLRLELVSAELDHTTGSEKSTIYAHASKAGKDKH-------------GNEL 135
D + GR++ L+L+SA G K GKD G
Sbjct: 30 DNLNAFLGRSVSLQLISATKADAHGK---------GKVGKDTFLEGINTSLPTLGAGESA 80
Query: 136 YEATFNVPSDFGEVGAMSVENEHHVEIYLMNIVLDGFSNGDPVNITCNSWIQPKNKNEPK 195
+ F G GA ++N VE +L ++ L+ SN + CNSW+ +
Sbjct: 81 FNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSV 140
Query: 196 RIFFTNKSYLPSQTPDGLKRFRIEELYHLRGHGQGVRQPSDRIYDYDVYNDLGNPDKR-- 253
RIFF N +Y+PS+TP L +R EEL LRG+G G R+ DRIYDYDVYNDLGNPDK
Sbjct: 141 RIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEK 200
Query: 254 --RPVLGGKK-FPYPRRCRTGRQHYESDPLKEKRDKYIYVPRDETFSDVKQEAFDNMK-D 309
RPVLGG FPYPRR RTGR +DP EK+ + YVPRDE +K + D ++
Sbjct: 201 LARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSK--DALEIG 258
Query: 310 YKSMCHAALPYIEKFFDGDK---KFEYFTEIDELFNEDGFSLPEAEPGFLNSLARFAKTL 366
KS+ P E FD +F F ++ +L+ E G LP + L +
Sbjct: 259 TKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLY-EGGIKLPRDVISTIIPLPVIKELY 317
Query: 367 KEMGEEVFQFDAPEAMLRDKFFWFRDEEFARQTLAGLNPCSIQLITEWPLKSSLDPKIYG 426
+ G+ + +F P + + W DEEFAR+ +AG+NPC I+ + E+P KS+LDP IYG
Sbjct: 318 RTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYG 377
Query: 427 PRLQESEITKDIIEKELGAMISVEEAIEQKKLFMLDYHDLFLPYVEKVRKLEHTTLYGSR 486
Q S+IT D ++ + M +EA+ ++LFMLDYHD+F+PYV ++ +L Y +R
Sbjct: 378 D--QSSKITADSLDLDGYTM---DEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATR 432
Query: 487 TVFFLTPDNTLRPLAIELTRP--PMDDKPLWRKVYTPGSWNSTKTWLWRLAKAHVLAHDS 544
T+ FL D TL+P+AIEL+ P D +V P ++ +W LAKA+V+ +DS
Sbjct: 433 TILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAK-EGVESTIWLLAKAYVIVNDS 491
Query: 545 GYHQLVSHWLRSHCVVEPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGG 604
YHQL+SHWL +H +EP++IAT+R LSV+HPIY+LL PH R + +NA+ R LI+A G
Sbjct: 492 CYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANG 551
Query: 605 VIENTFSPGEYCMEMSSVIYDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPF 664
+IE TF P +Y +EMSS +Y K W F +QALP DL+KRG+A++DP+ HG++L I+DYP+
Sbjct: 552 IIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPY 610
Query: 665 AKDGLDLWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLK 724
A DGL++W +K WV +YV YY V++D ELQ WW E GH D KD+PWWP L+
Sbjct: 611 AADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQ 670
Query: 725 TPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIE 784
T ++L+E+ IIW+AS HAAVNFG Y Y NRPT +R +P++ E ++ I
Sbjct: 671 TLEDLVEVCLIIIWIASALHAAVNFGNYPYGGLIMNRPTASRRLLPEKGTPE--YEEMIN 728
Query: 785 KPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFEKFSGR 844
E A L T ++ ++ ++ +++LSTH+ DE +LG+ P W D AF+KF +
Sbjct: 729 NHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNK 788
Query: 845 LMELEGIIDERNGDSTLV-NRNGAGVVPYNLLKPYWKDGDKEKGVPYSISI 894
L E+E + RN D +L NR G +PY LL P ++G +G+P SISI
Sbjct: 789 LKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1FGO|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant
Length = 839
Score = 625 bits (1611), Expect = e-179, Method: Compositional matrix adjust.
Identities = 343/831 (41%), Positives = 484/831 (58%), Gaps = 46/831 (5%)
Query: 89 DYEDYLFGRTLRLELVSAELDHTTGSEKSTIYAHASKAGKDKH-------------GNEL 135
D + GR++ L+L+SA G K GKD G
Sbjct: 30 DNLNAFLGRSVSLQLISATKADAHGK---------GKVGKDTFLEGINTSLPTLGAGESA 80
Query: 136 YEATFNVPSDFGEVGAMSVENEHHVEIYLMNIVLDGFSNGDPVNITCNSWIQPKNKNEPK 195
+ F G GA ++N VE +L ++ L+ SN + CNSW+ +
Sbjct: 81 FNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSV 140
Query: 196 RIFFTNKSYLPSQTPDGLKRFRIEELYHLRGHGQGVRQPSDRIYDYDVYNDLGNPDKR-- 253
RIFF N +Y+PS+TP L +R EEL LRG+G G R+ DRIYDYDVYNDLGNPDK
Sbjct: 141 RIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEK 200
Query: 254 --RPVLGGKK-FPYPRRCRTGRQHYESDPLKEKRDKYIYVPRDETFSDVKQEAFDNMK-D 309
RPVLGG FPYPRR RTGR +DP EK+ + YVPRDE +K + D ++
Sbjct: 201 LARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSK--DALEIG 258
Query: 310 YKSMCHAALPYIEKFFDGDK---KFEYFTEIDELFNEDGFSLPEAEPGFLNSLARFAKTL 366
KS+ P E FD +F F ++ +L+ E G LP + L +
Sbjct: 259 TKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLY-EGGIKLPRDVISTIIPLPVIKELY 317
Query: 367 KEMGEEVFQFDAPEAMLRDKFFWFRDEEFARQTLAGLNPCSIQLITEWPLKSSLDPKIYG 426
+ G+ + +F P + + W DEEFAR+ +AG+NPC I+ + E+P KS+LDP IYG
Sbjct: 318 RTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYG 377
Query: 427 PRLQESEITKDIIEKELGAMISVEEAIEQKKLFMLDYHDLFLPYVEKVRKLEHTTLYGSR 486
Q S+IT D ++ + M +EA+ ++LFMLDYHD+F+PYV ++ +L Y +R
Sbjct: 378 D--QSSKITADSLDLDGYTM---DEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATR 432
Query: 487 TVFFLTPDNTLRPLAIELTRP--PMDDKPLWRKVYTPGSWNSTKTWLWRLAKAHVLAHDS 544
T+ FL D TL+P+AIEL+ P D +V P ++ +W LAKA+V+ +DS
Sbjct: 433 TILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAK-EGVESTIWLLAKAYVIVNDS 491
Query: 545 GYHQLVSHWLRSHCVVEPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGG 604
YH L+SHWL +H +EP++IAT+R LSV+HPIY+LL PH R + +NA+ R LI+A G
Sbjct: 492 CYHALMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANG 551
Query: 605 VIENTFSPGEYCMEMSSVIYDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPF 664
+IE TF P +Y +EMSS +Y K W F +QALP DL+KRG+A++DP+ HG++L I+DYP+
Sbjct: 552 IIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPY 610
Query: 665 AKDGLDLWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLK 724
A DGL++W +K WV +YV YY V++D ELQ WW E GH D KD+PWWP L+
Sbjct: 611 AADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQ 670
Query: 725 TPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIE 784
T ++L+E+ IIW+AS HAAVNFGQY Y NRPT +R +P++ E ++ I
Sbjct: 671 TLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPE--YEEMIN 728
Query: 785 KPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFEKFSGR 844
E A L T ++ ++ ++ +++LSTH+ DE +LG+ P W D AF+KF +
Sbjct: 729 NHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNK 788
Query: 845 LMELEGIIDERNGDSTLV-NRNGAGVVPYNLLKPYWKDGDKEKGVPYSISI 894
L E+E + RN D +L NR G +PY LL P ++G +G+P SISI
Sbjct: 789 LKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|3BNC|A Chain A, Lipoxygenase-1 (Soybean) I553g Mutant
Length = 839
Score = 624 bits (1609), Expect = e-179, Method: Compositional matrix adjust.
Identities = 343/831 (41%), Positives = 484/831 (58%), Gaps = 46/831 (5%)
Query: 89 DYEDYLFGRTLRLELVSAELDHTTGSEKSTIYAHASKAGKDKH-------------GNEL 135
D + GR++ L+L+SA G K GKD G
Sbjct: 30 DNLNAFLGRSVSLQLISATKADAHGK---------GKVGKDTFLEGINTSLPTLGAGESA 80
Query: 136 YEATFNVPSDFGEVGAMSVENEHHVEIYLMNIVLDGFSNGDPVNITCNSWIQPKNKNEPK 195
+ F G GA ++N VE +L ++ L+ SN + CNSW+ +
Sbjct: 81 FNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSV 140
Query: 196 RIFFTNKSYLPSQTPDGLKRFRIEELYHLRGHGQGVRQPSDRIYDYDVYNDLGNPDKR-- 253
RIFF N +Y+PS+TP L +R EEL LRG+G G R+ DRIYDYDVYNDLGNPDK
Sbjct: 141 RIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEK 200
Query: 254 --RPVLGGKK-FPYPRRCRTGRQHYESDPLKEKRDKYIYVPRDETFSDVKQEAFDNMK-D 309
RPVLGG FPYPRR RTGR +DP EK+ + YVPRDE +K + D ++
Sbjct: 201 LARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSK--DALEIG 258
Query: 310 YKSMCHAALPYIEKFFDGDK---KFEYFTEIDELFNEDGFSLPEAEPGFLNSLARFAKTL 366
KS+ P E FD +F F ++ +L+ E G LP + L +
Sbjct: 259 TKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLY-EGGIKLPRDVISTIIPLPVIKELY 317
Query: 367 KEMGEEVFQFDAPEAMLRDKFFWFRDEEFARQTLAGLNPCSIQLITEWPLKSSLDPKIYG 426
+ G+ + +F P + + W DEEFAR+ +AG+NPC I+ + E+P KS+LDP IYG
Sbjct: 318 RTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYG 377
Query: 427 PRLQESEITKDIIEKELGAMISVEEAIEQKKLFMLDYHDLFLPYVEKVRKLEHTTLYGSR 486
Q S+IT D ++ + M +EA+ ++LFMLDYHD+F+PYV ++ +L Y +R
Sbjct: 378 D--QSSKITADSLDLDGYTM---DEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATR 432
Query: 487 TVFFLTPDNTLRPLAIELTRP--PMDDKPLWRKVYTPGSWNSTKTWLWRLAKAHVLAHDS 544
T+ FL D TL+P+AIEL+ P D +V P ++ +W LAKA+V+ +DS
Sbjct: 433 TILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAK-EGVESTIWLLAKAYVIVNDS 491
Query: 545 GYHQLVSHWLRSHCVVEPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGG 604
YHQL+SHWL +H +EP++IAT+R LSV+HPIY+LL PH R + +NA+ R LI+A G
Sbjct: 492 CYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANG 551
Query: 605 VIENTFSPGEYCMEMSSVIYDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPF 664
+ E TF P +Y +EMSS +Y K W F +QALP DL+KRG+A++DP+ HG++L I+DYP+
Sbjct: 552 IGETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPY 610
Query: 665 AKDGLDLWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLK 724
A DGL++W +K WV +YV YY V++D ELQ WW E GH D KD+PWWP L+
Sbjct: 611 AADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQ 670
Query: 725 TPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIE 784
T ++L+E+ IIW+AS HAAVNFGQY Y NRPT +R +P++ E ++ I
Sbjct: 671 TLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPE--YEEMIN 728
Query: 785 KPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFEKFSGR 844
E A L T ++ ++ ++ +++LSTH+ DE +LG+ P W D AF+KF +
Sbjct: 729 NHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNK 788
Query: 845 LMELEGIIDERNGDSTLV-NRNGAGVVPYNLLKPYWKDGDKEKGVPYSISI 894
L E+E + RN D +L NR G +PY LL P ++G +G+P SISI
Sbjct: 789 LKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|3VF1|A Chain A, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests
A Mechanism For Ca-Regulation
pdb|3VF1|B Chain B, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests
A Mechanism For Ca-Regulation
Length = 698
Score = 184 bits (466), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 139/511 (27%), Positives = 238/511 (46%), Gaps = 66/511 (12%)
Query: 388 FWFRDEEFARQTLAGLNPCSIQLITEWPLKSSLDPKIYGPRLQESEITKDIIEKELGAMI 447
+W D F Q L G NP I+ + P + + +++EK L
Sbjct: 250 YWRDDVWFGSQFLNGSNPEVIRRCDKLP--------------ENFPVKNEMVEKLLDRGY 295
Query: 448 SVEEAIEQKKLFMLDYHDL-FLPYVEKVRKLEHTTLYGSRTVFFLTPDNTLRPLAIELTR 506
++E+A+++ +F+ DY L +P ++ + T +F+L ++ + P+AI+L +
Sbjct: 296 TLEKAMKEGLIFITDYKILEGIPTMDTPEDKRYITT--PLGLFYLKNNDDIIPIAIQLYQ 353
Query: 507 PPMDDKPLWRKVYTPGSWNSTKTWLWRLAKAHVLAHDSGYHQLVSHWLRSHCVVEPYIIA 566
P ++ +W + W W +AK + D+ YHQ+++H LR H ++EP ++
Sbjct: 354 QPGENNSIWTPL-------KDTEWDWIMAKLWLRCADTQYHQMITHLLRCHLMMEPTAVS 406
Query: 567 TNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGGVIENTFSPGEYCMEMSSVIYDK 626
+ R L +HP+++LL+PH + + +N +GR+ LI GG + S G + +
Sbjct: 407 SWRNLPSVHPVWKLLYPHTKGIMAINTLGRNDLIPTGGAADKVLSIGGGGQVTLMQKHYR 466
Query: 627 QWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLDLWGILKQWVTDYVNHY 686
FD L KDL +RG+ GL+ + + D L LW ++ Q+V D + Y
Sbjct: 467 SVTFDSYDLVKDLRQRGV--------DGLR----KFYYKDDALLLWNVIHQFVQDIIQIY 514
Query: 687 YPDQSLVESDDELQAWWTEIRTVGH---ADKKDEPWWPVLKTPQNLIEILTTIIWVASGH 743
Y D V+ D+E+Q W ++ G+ +D D+ + + L+ LT +++ S
Sbjct: 515 YNDDDSVKKDNEIQDWIRDLHENGYPAGSDGTDKKVPKSFENREELVHFLTVVVFTCSCQ 574
Query: 744 HAAVNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILV 803
HAAVNF Q + PN PT+ R PTEK + ++ + N+ QA+ +
Sbjct: 575 HAAVNFSQMATYGFHPNSPTLMR----QPPPTEKG-----KSNHKVIMASLANKHQAVTM 625
Query: 804 IATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFEKFSGRLMELEGIIDERNGDSTLVN 863
++ ++ L+T P E+FLG + +G D +AA KF L + I E
Sbjct: 626 VSVVNALTTIYPTEKFLGDYADNLFG-DAAAHAAMAKFKSNLANITKQITE--------- 675
Query: 864 RNGAGVVPYNLLKPYWKDGDKEKGVPYSISI 894
RN V PY L P VP SI+I
Sbjct: 676 RNQGMVSPYTWLIP--------GHVPNSIAI 698
>pdb|3V98|A Chain A, S663d Stable-5-Lox
pdb|3V98|B Chain B, S663d Stable-5-Lox
pdb|3V99|A Chain A, S663d Stable-5-Lox In Complex With Arachidonic Acid
pdb|3V99|B Chain B, S663d Stable-5-Lox In Complex With Arachidonic Acid
Length = 691
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 146/508 (28%), Positives = 234/508 (46%), Gaps = 62/508 (12%)
Query: 389 WFRDEEFARQTLAGLNPCSIQLITEWPLKSSLDPKIYGPRLQESEITKDIIEKELGAMIS 448
W D F Q L G NP I+ TE P ++ +T +++E L +S
Sbjct: 244 WQEDLMFGYQFLNGANPVLIRRCTELP--------------EKLPVTTEMVECSLERQLS 289
Query: 449 VEEAIEQKKLFMLDYHDLFLPYVEKVRKLEHTTLYGSRTVFFLTPDNTLRPLAIELTRPP 508
+E+ ++Q +F++D+ L K L + + N + P+AI+L + P
Sbjct: 290 LEQEVQQGNIFIVDFELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIP 349
Query: 509 MDDKPLWRKVYTPGSWNSTKTWLWRLAKAHVLAHDSGYHQLVSHWLRSHCVVEPYIIATN 568
D+ P ++ P S + W LAK V + D HQ ++H LR+H V E + IA
Sbjct: 350 GDENP----IFLP----SDAKYDWLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMY 401
Query: 569 RQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGGVIE--NTFSPGEYCMEMSSVIYDK 626
RQL +HPI++LL H+R+T+ +N R+ LI G+ + N G + + + K
Sbjct: 402 RQLPAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAM--K 459
Query: 627 QWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLDLWGILKQWVTDYVNHY 686
+ P+ + RGM ++ I Y + DGL +W ++ + + V+ Y
Sbjct: 460 DLTYASLCFPEAIKARGMESKE---------DIPYYFYRDDGLLVWEAIRTFTAEVVDIY 510
Query: 687 YPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLKTPQNLIEILTTIIWVASGHHAA 746
Y +VE D ELQ + ++ G +K + +K+ + L E LT +I+ AS HAA
Sbjct: 511 YEGDQVVEEDPELQDFVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAA 570
Query: 747 VNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIAT 806
VNFGQY +A++ PN P R PT K T IE+ D T P++ ++ +
Sbjct: 571 VNFGQYDWASWIPNAPPTMRA----PPPTAKGVVT-IEQIVD----TLPDRGRSCWHLGA 621
Query: 807 LDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFEKFSGRLMELEGIIDERNGDSTLVNRNG 866
+ LS +E FLG E + E PV A +F L + +I ERN + L
Sbjct: 622 VWALSQFQENELFLGMYPEEHFIEKPV-KEAMARFRKNLEAIVSVIAERNENLQL----- 675
Query: 867 AGVVPYNLLKPYWKDGDKEKGVPYSISI 894
PY Y+ D D+ +P S++I
Sbjct: 676 ----PY-----YYLDPDR---IPNSVAI 691
>pdb|3O8Y|A Chain A, Stable-5-Lipoxygenase
pdb|3O8Y|B Chain B, Stable-5-Lipoxygenase
Length = 691
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 142/491 (28%), Positives = 225/491 (45%), Gaps = 54/491 (10%)
Query: 389 WFRDEEFARQTLAGLNPCSIQLITEWPLKSSLDPKIYGPRLQESEITKDIIEKELGAMIS 448
W D F Q L G NP I+ TE P ++ +T +++E L +S
Sbjct: 244 WQEDLMFGYQFLNGANPVLIRRCTELP--------------EKLPVTTEMVECSLERQLS 289
Query: 449 VEEAIEQKKLFMLDYHDLFLPYVEKVRKLEHTTLYGSRTVFFLTPDNTLRPLAIELTRPP 508
+E+ ++Q +F++D+ L K L + + N + P+AI+L + P
Sbjct: 290 LEQEVQQGNIFIVDFELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIP 349
Query: 509 MDDKPLWRKVYTPGSWNSTKTWLWRLAKAHVLAHDSGYHQLVSHWLRSHCVVEPYIIATN 568
D+ P ++ P S + W LAK V + D HQ ++H LR+H V E + IA
Sbjct: 350 GDENP----IFLP----SDAKYDWLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMY 401
Query: 569 RQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGGVIE--NTFSPGEYCMEMSSVIYDK 626
RQL +HPI++LL H+R+T+ +N R+ LI G+ + N G + + + K
Sbjct: 402 RQLPAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAM--K 459
Query: 627 QWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLDLWGILKQWVTDYVNHY 686
+ P+ + RGM ++ I Y + DGL +W ++ + + V+ Y
Sbjct: 460 DLTYASLCFPEAIKARGMESKE---------DIPYYFYRDDGLLVWEAIRTFTAEVVDIY 510
Query: 687 YPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLKTPQNLIEILTTIIWVASGHHAA 746
Y +VE D ELQ + ++ G +K + +K+ + L E LT +I+ AS HAA
Sbjct: 511 YEGDQVVEEDPELQDFVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAA 570
Query: 747 VNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIAT 806
VNFGQY +A++ PN P R PT K T IE+ D T P++ ++ +
Sbjct: 571 VNFGQYDWASWIPNAPPTMRA----PPPTAKGVVT-IEQIVD----TLPDRGRSCWHLGA 621
Query: 807 LDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFEKFSGRLMELEGIIDERNGDSTLVNRNG 866
+ LS +E FLG E + E PV A +F L + +I ERN + L
Sbjct: 622 VWALSQFQENELFLGMYPEEHFIEKPV-KEAMARFRKNLEAIVSVIAERNENLQL----- 675
Query: 867 AGVVPYNLLKP 877
PY L P
Sbjct: 676 ----PYYYLSP 682
>pdb|3V92|B Chain B, S663a Stable-5-Lox
pdb|3V92|A Chain A, S663a Stable-5-Lox
Length = 691
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 142/491 (28%), Positives = 225/491 (45%), Gaps = 54/491 (10%)
Query: 389 WFRDEEFARQTLAGLNPCSIQLITEWPLKSSLDPKIYGPRLQESEITKDIIEKELGAMIS 448
W D F Q L G NP I+ TE P ++ +T +++E L +S
Sbjct: 244 WQEDLMFGYQFLNGANPVLIRRCTELP--------------EKLPVTTEMVECSLERQLS 289
Query: 449 VEEAIEQKKLFMLDYHDLFLPYVEKVRKLEHTTLYGSRTVFFLTPDNTLRPLAIELTRPP 508
+E+ ++Q +F++D+ L K L + + N + P+AI+L + P
Sbjct: 290 LEQEVQQGNIFIVDFELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIP 349
Query: 509 MDDKPLWRKVYTPGSWNSTKTWLWRLAKAHVLAHDSGYHQLVSHWLRSHCVVEPYIIATN 568
D+ P ++ P S + W LAK V + D HQ ++H LR+H V E + IA
Sbjct: 350 GDENP----IFLP----SDAKYDWLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMY 401
Query: 569 RQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGGVIE--NTFSPGEYCMEMSSVIYDK 626
RQL +HPI++LL H+R+T+ +N R+ LI G+ + N G + + + K
Sbjct: 402 RQLPAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAM--K 459
Query: 627 QWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLDLWGILKQWVTDYVNHY 686
+ P+ + RGM ++ I Y + DGL +W ++ + + V+ Y
Sbjct: 460 DLTYASLCFPEAIKARGMESKE---------DIPYYFYRDDGLLVWEAIRTFTAEVVDIY 510
Query: 687 YPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLKTPQNLIEILTTIIWVASGHHAA 746
Y +VE D ELQ + ++ G +K + +K+ + L E LT +I+ AS HAA
Sbjct: 511 YEGDQVVEEDPELQDFVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAA 570
Query: 747 VNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIAT 806
VNFGQY +A++ PN P R PT K T IE+ D T P++ ++ +
Sbjct: 571 VNFGQYDWASWIPNAPPTMRA----PPPTAKGVVT-IEQIVD----TLPDRGRSCWHLGA 621
Query: 807 LDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFEKFSGRLMELEGIIDERNGDSTLVNRNG 866
+ LS +E FLG E + E PV A +F L + +I ERN + L
Sbjct: 622 VWALSQFQENELFLGMYPEEHFIEKPV-KEAMARFRKNLEAIVSVIAERNENLQL----- 675
Query: 867 AGVVPYNLLKP 877
PY L P
Sbjct: 676 ----PYYYLAP 682
>pdb|3DY5|A Chain A, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura
Homomalla
pdb|3DY5|C Chain C, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura
Homomalla
Length = 1066
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 129/489 (26%), Positives = 222/489 (45%), Gaps = 63/489 (12%)
Query: 389 WFRDEEFARQTLAGLNPCSIQLITEWPLKSSLDPKIYGPRLQESEITKDIIEKELGAMIS 448
W D F Q L G NP + P +T + + L +
Sbjct: 599 WHEDRWFGYQFLNGANPVILTRCDALP--------------SNFPVTNEHVNASLDRGKN 644
Query: 449 VEEAIEQKKLFMLDY--------------HDLFLPYVEKVRKLEHTTLYGSR--TVFFLT 492
++E I+ ++++D+ D+ + ++ E Y + +F++
Sbjct: 645 LDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVN 704
Query: 493 PDNTLRPLAIELTRPPMDDKPLWRKVYTPGSWNSTKTWLWRLAKAHVLAHDSGYHQLVSH 552
L P+AI++ + P + P+W TP N W +AK + +S +HQL +H
Sbjct: 705 KLGHLMPIAIQINQEPGPENPIW----TPHEENEHD---WMMAKFWLGVAESNFHQLNTH 757
Query: 553 WLRSHCVVEPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGGVIENTFS- 611
LR+H E + ++T R L+ HPI++LL PH+ L ++ IGR LI +GG+++ + S
Sbjct: 758 LLRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELIGSGGIVDQSLSL 817
Query: 612 -PGEYCMEMSSVIYDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLD 670
G + M K+ + LP L KRG V+DP+ G + + DGL
Sbjct: 818 GGGGHVTFMEKCF--KEVNLQDYHLPNALKKRG--VDDPSKLPG-------FYYRDDGLA 866
Query: 671 LWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVG---HADKKDEPWWPVLKTPQ 727
LW ++ ++ + + +Y + V+ D+E+Q+W ++ G + +D ++ +
Sbjct: 867 LWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGVPASFESRE 926
Query: 728 NLIEILTTIIWVASGHHAAVNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPE 787
L E+LT++++ S HAAVNF Q + + PN P I R P K E
Sbjct: 927 QLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPP---------KKKGEATL 977
Query: 788 DALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFEKFSGRLME 847
++L T P++ QA IAT+ +L+ S DE +LG AW ED A +F +L +
Sbjct: 978 QSILSTLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAW-EDKDALDAINRFQDKLED 1036
Query: 848 LEGIIDERN 856
+ I +RN
Sbjct: 1037 ISKKIKQRN 1045
>pdb|3FG1|A Chain A, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|B Chain B, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|C Chain C, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|D Chain D, Crystal Structure Of Delta413-417:gs Lox
Length = 696
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 131/489 (26%), Positives = 222/489 (45%), Gaps = 63/489 (12%)
Query: 389 WFRDEEFARQTLAGLNPCSIQLITEWPLKSSLDPKIYGPRLQESEITKDIIEKELGAMIS 448
W D F Q L G NP + P +T + + L +
Sbjct: 229 WHEDRWFGYQFLNGANPVILTRCDALP--------------SNFPVTNEHVNASLDRGKN 274
Query: 449 VEEAIEQKKLFMLDYHDLFL------PYVEKV-----RKLEHTT-----LYGSRTVFFLT 492
++E I+ ++++D+ L P +E + L+H +F++
Sbjct: 275 LDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVN 334
Query: 493 PDNTLRPLAIELTRPPMDDKPLWRKVYTPGSWNSTKTWLWRLAKAHVLAHDSGYHQLVSH 552
L P+AI++ + P + P+W TP N W +AK + +S +HQL +H
Sbjct: 335 KLGHLMPIAIQINQEPGPENPIW----TPHEENEHD---WMMAKFWLGVAESNFHQLNTH 387
Query: 553 WLRSHCVVEPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGGVIENTFS- 611
LR+H E + ++T R L+ HPI++LL PH+ L ++ IGR LI +GG+++ + S
Sbjct: 388 LLRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELIGSGGIVDQSLSL 447
Query: 612 -PGEYCMEMSSVIYDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLD 670
G + M K+ + LP L KRG V+DP+ G + + DGL
Sbjct: 448 GGGGHVTFMEKCF--KEVNLQDYHLPNALKKRG--VDDPSKLPG-------FYYRDDGLA 496
Query: 671 LWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVG---HADKKDEPWWPVLKTPQ 727
LW ++ ++ + + +Y + V+ D+E+Q+W ++ G + +D ++ +
Sbjct: 497 LWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGVPASFESRE 556
Query: 728 NLIEILTTIIWVASGHHAAVNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPE 787
L E+LT++++ S HAAVNF Q + + PN P I R P K E
Sbjct: 557 QLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPP---------KKKGEATL 607
Query: 788 DALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFEKFSGRLME 847
++L T P++ QA IAT+ +L+ S DE +LG AW ED A +F +L +
Sbjct: 608 QSILSTLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAW-EDKDALDAINRFQDKLED 666
Query: 848 LEGIIDERN 856
+ I +RN
Sbjct: 667 ISKKIKQRN 675
>pdb|2FNQ|A Chain A, Insights From The X-Ray Crystal Structure Of Coral 8r-
Lipoxygenase: Calcium Activation Via A C2-Like Domain
And A Structural Basis Of Product Chirality
pdb|2FNQ|B Chain B, Insights From The X-Ray Crystal Structure Of Coral 8r-
Lipoxygenase: Calcium Activation Via A C2-Like Domain
And A Structural Basis Of Product Chirality
Length = 699
Score = 166 bits (419), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 222/489 (45%), Gaps = 63/489 (12%)
Query: 389 WFRDEEFARQTLAGLNPCSIQLITEWPLKSSLDPKIYGPRLQESEITKDIIEKELGAMIS 448
W D F Q L G NP + P +T + + L +
Sbjct: 232 WHEDRWFGYQFLNGANPVILTRCDALP--------------SNFPVTNEHVNASLDRGKN 277
Query: 449 VEEAIEQKKLFMLDY--------------HDLFLPYVEKVRKLEHTTLYGSR--TVFFLT 492
++E I+ ++++D+ D+ + ++ E Y + +F++
Sbjct: 278 LDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVN 337
Query: 493 PDNTLRPLAIELTRPPMDDKPLWRKVYTPGSWNSTKTWLWRLAKAHVLAHDSGYHQLVSH 552
L P+AI++ + P + P+W TP N W +AK + +S +HQL +H
Sbjct: 338 KLGHLMPIAIQINQEPGPENPIW----TPHEENEHD---WMMAKFWLGVAESNFHQLNTH 390
Query: 553 WLRSHCVVEPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGGVIENTFS- 611
LR+H E + ++T R L+ HP+++LL PH+ L ++ IGR LI +GG+++ + S
Sbjct: 391 LLRTHLTTESFALSTWRNLASAHPVFKLLQPHIYGVLAIDTIGRKELIGSGGIVDQSLSL 450
Query: 612 -PGEYCMEMSSVIYDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLD 670
G + M K+ + LP L KRG V+DP+ G + + DGL
Sbjct: 451 GGGGHVTFMEKCF--KEVNLQDYHLPNALKKRG--VDDPSKLPG-------FYYRDDGLA 499
Query: 671 LWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVG---HADKKDEPWWPVLKTPQ 727
LW ++ ++ + + +Y + V+ D+E+Q+W ++ G + +D ++ +
Sbjct: 500 LWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGVPASFESRE 559
Query: 728 NLIEILTTIIWVASGHHAAVNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPE 787
L E+LT++++ S HAAVNF Q + + PN P + R P K E
Sbjct: 560 QLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAVLRHPPP---------KKKGEATL 610
Query: 788 DALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFEKFSGRLME 847
++L T P++ QA IAT+ +L+ S DE +LG AW ED A +F +L +
Sbjct: 611 QSILSTLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAW-EDKDALDAINRFQDKLED 669
Query: 848 LEGIIDERN 856
+ I +RN
Sbjct: 670 ISKKIKQRN 678
>pdb|3FG4|A Chain A, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|B Chain B, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|C Chain C, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|D Chain D, Crystal Structure Of Delta413-417:gs I805a Lox
Length = 696
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/489 (26%), Positives = 221/489 (45%), Gaps = 63/489 (12%)
Query: 389 WFRDEEFARQTLAGLNPCSIQLITEWPLKSSLDPKIYGPRLQESEITKDIIEKELGAMIS 448
W D F Q L G NP + P +T + + L +
Sbjct: 229 WHEDRWFGYQFLNGANPVILTRCDALP--------------SNFPVTNEHVNASLDRGKN 274
Query: 449 VEEAIEQKKLFMLDYHDLFL------PYVEKV-----RKLEHTT-----LYGSRTVFFLT 492
++E I+ ++++D+ L P +E + L+H +F++
Sbjct: 275 LDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVN 334
Query: 493 PDNTLRPLAIELTRPPMDDKPLWRKVYTPGSWNSTKTWLWRLAKAHVLAHDSGYHQLVSH 552
L P+AI++ + P + P+W TP N W +AK + +S +HQL +H
Sbjct: 335 KLGHLMPIAIQINQEPGPENPIW----TPHEENEHD---WMMAKFWLGVAESNFHQLNTH 387
Query: 553 WLRSHCVVEPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGGVIENTFS- 611
LR+H E + ++T R L+ HPI++LL PH+ L ++ IGR L +GG+++ + S
Sbjct: 388 LLRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELAGSGGIVDQSLSL 447
Query: 612 -PGEYCMEMSSVIYDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLD 670
G + M K+ + LP L KRG V+DP+ G + + DGL
Sbjct: 448 GGGGHVTFMEKCF--KEVNLQDYHLPNALKKRG--VDDPSKLPG-------FYYRDDGLA 496
Query: 671 LWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVG---HADKKDEPWWPVLKTPQ 727
LW ++ ++ + + +Y + V+ D+E+Q+W ++ G + +D ++ +
Sbjct: 497 LWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGVPASFESRE 556
Query: 728 NLIEILTTIIWVASGHHAAVNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPE 787
L E+LT++++ S HAAVNF Q + + PN P I R P K E
Sbjct: 557 QLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPP---------KKKGEATL 607
Query: 788 DALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFEKFSGRLME 847
++L T P++ QA IAT+ +L+ S DE +LG AW ED A +F +L +
Sbjct: 608 QSILSTLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAW-EDKDALDAINRFQDKLED 666
Query: 848 LEGIIDERN 856
+ I +RN
Sbjct: 667 ISKKIKQRN 675
>pdb|3FG3|A Chain A, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|B Chain B, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|C Chain C, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|D Chain D, Crystal Structure Of Delta413-417:gs I805w Lox
Length = 696
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 221/489 (45%), Gaps = 63/489 (12%)
Query: 389 WFRDEEFARQTLAGLNPCSIQLITEWPLKSSLDPKIYGPRLQESEITKDIIEKELGAMIS 448
W D F Q L G NP + P +T + + L +
Sbjct: 229 WHEDRWFGYQFLNGANPVILTRCDALP--------------SNFPVTNEHVNASLDRGKN 274
Query: 449 VEEAIEQKKLFMLDY--------------HDLFLPYVEKVRKLEHTTLYGSR--TVFFLT 492
++E I+ ++++D+ D+ + ++ E Y + +F++
Sbjct: 275 LDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVN 334
Query: 493 PDNTLRPLAIELTRPPMDDKPLWRKVYTPGSWNSTKTWLWRLAKAHVLAHDSGYHQLVSH 552
L P+AI++ + P + P+W TP N W +AK + +S +HQL +H
Sbjct: 335 KLGHLMPIAIQINQEPGPENPIW----TPHEENEHD---WMMAKFWLGVAESNFHQLNTH 387
Query: 553 WLRSHCVVEPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGGVIENTFS- 611
LR+H E + ++T R L+ HPI++LL PH+ L ++ IGR L +GG+++ + S
Sbjct: 388 LLRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELWGSGGIVDQSLSL 447
Query: 612 -PGEYCMEMSSVIYDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLD 670
G + M K+ + LP L KRG V+DP+ G + + DGL
Sbjct: 448 GGGGHVTFMEKCF--KEVNLQDYHLPNALKKRG--VDDPSKLPG-------FYYRDDGLA 496
Query: 671 LWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVG---HADKKDEPWWPVLKTPQ 727
LW ++ ++ + + +Y + V+ D+E+Q+W ++ G + +D ++ +
Sbjct: 497 LWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGVPASFESRE 556
Query: 728 NLIEILTTIIWVASGHHAAVNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPE 787
L E+LT++++ S HAAVNF Q + + PN P I R P K E
Sbjct: 557 QLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPP---------KKKGEATL 607
Query: 788 DALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFEKFSGRLME 847
++L T P++ QA IAT+ +L+ S DE +LG AW ED A +F +L +
Sbjct: 608 QSILSTLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAW-EDKDALDAINRFQDKLED 666
Query: 848 LEGIIDERN 856
+ I +RN
Sbjct: 667 ISKKIKQRN 675
>pdb|1LOX|A Chain A, Rabbit Reticulocyte 15-Lipoxygenase
Length = 662
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 148/567 (26%), Positives = 239/567 (42%), Gaps = 80/567 (14%)
Query: 318 LPYIEKFFDGDKKFEYFTEIDELFNEDGFSLPEAEPGFLNSLARFA--KTLKEMGEEVFQ 375
LP E+F + DKK ++ E + AE NSL A KTL + +F
Sbjct: 160 LPVDERFLE-DKKIDF---------EASLAWGLAELALKNSLNILAPWKTLDDF-NRIFW 208
Query: 376 FDAPEAMLRDKFFWFRDEEFARQTLAGLNPCSIQLITEWPLKSSLDPKIYGPRLQESEIT 435
+ R + W D F Q L G NP ++ + P + ++ P ++E +
Sbjct: 209 CGRSKLARRVRDSWQEDSLFGYQFLNGANPMLLRRSVQLPAR-----LVFPPGMEELQAQ 263
Query: 436 KDIIEKELGAMISVEEAIEQKKLFMLDYHDLFLPYVEKVRKLEHTTLYGSRTVFFLTPDN 495
+EKEL A LF D+ L V L + L PD
Sbjct: 264 ---LEKELKA----------GTLFEADFA-LLDNIKANVILYCQQYLAAPLVMLKLQPDG 309
Query: 496 TLRPLAIELTRPPMDDKPLWRKVYTPGSWNSTKTWLWRLAKAHVLAHDSGYHQLVSHWLR 555
L P+ I+L P + P ++ P + +W LAK V + D H+L SH LR
Sbjct: 310 KLMPMVIQLHLPKIGSSP--PPLFLP----TDPPMVWLLAKCWVRSSDFQVHELNSHLLR 363
Query: 556 SHCVVEPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGGVIENTFSPG-- 613
H + E + +AT R L +HP+++L+ PHLRYTLE+N R+ L+S G+ + S G
Sbjct: 364 GHLMAEVFTVATMRCLPSIHPVFKLIVPHLRYTLEINVRARNGLVSDFGIFDQIMSTGGG 423
Query: 614 ---EYCMEMSSVIYDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLD 670
+ + + + + + P DL RG+ L ++ +A+D L
Sbjct: 424 GHVQLLQQAGAFLTYRSF-----CPPDDLADRGL------------LGVESSFYAQDALR 466
Query: 671 LWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLKTPQNLI 730
LW I+ ++V + YY V D ELQ+W EI +G + + + L++
Sbjct: 467 LWEIISRYVQGIMGLYYKTDEAVRDDLELQSWCREITEIGLQGAQKQGFPTSLQSVAQAC 526
Query: 731 EILTTIIWVASGHHAAVNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDAL 790
+T I+ +G H++++ GQ + + PN P R+ PT K + + +
Sbjct: 527 HFVTMCIFTCTGQHSSIHLGQLDWFTWVPNAPCTMRL----PPPTTK------DATLETV 576
Query: 791 LYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFEKFSGRLMELEG 850
+ T PN Q+ L ++ + L P LG+ +E + P A EKF L ++
Sbjct: 577 MATLPNLKQSSLQMSIVWQLGRDQPIMVPLGQHQE-EYFSGPEPRAVLEKFREELAIMDK 635
Query: 851 IIDERNGDSTLVNRNGAGVVPYNLLKP 877
I+ RN +PY L+P
Sbjct: 636 EIEVRNEKLD---------IPYEYLRP 653
>pdb|2P0M|A Chain A, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase
pdb|2P0M|B Chain B, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase
Length = 662
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 148/567 (26%), Positives = 239/567 (42%), Gaps = 80/567 (14%)
Query: 318 LPYIEKFFDGDKKFEYFTEIDELFNEDGFSLPEAEPGFLNSLARFA--KTLKEMGEEVFQ 375
LP E+F + DKK ++ E + AE NSL A KTL + +F
Sbjct: 160 LPVDERFLE-DKKIDF---------EASLAWGLAELALKNSLNILAPWKTLDDF-NRIFW 208
Query: 376 FDAPEAMLRDKFFWFRDEEFARQTLAGLNPCSIQLITEWPLKSSLDPKIYGPRLQESEIT 435
+ R + W D F Q L G NP ++ + P + ++ P ++E +
Sbjct: 209 CGRSKLARRVRDSWQEDSLFGYQFLNGANPMLLRRSVQLPAR-----LVFPPGMEELQAQ 263
Query: 436 KDIIEKELGAMISVEEAIEQKKLFMLDYHDLFLPYVEKVRKLEHTTLYGSRTVFFLTPDN 495
+EKEL A LF D+ L V L + L PD
Sbjct: 264 ---LEKELKA----------GTLFEADFA-LLDNIKANVILYCQQYLAAPLVMLKLQPDG 309
Query: 496 TLRPLAIELTRPPMDDKPLWRKVYTPGSWNSTKTWLWRLAKAHVLAHDSGYHQLVSHWLR 555
L P+ I+L P + P ++ P + +W LAK V + D H+L SH LR
Sbjct: 310 KLMPMVIQLHLPKIGSSP--PPLFLP----TDPPMVWLLAKCWVRSSDFQVHELNSHLLR 363
Query: 556 SHCVVEPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGGVIENTFSPG-- 613
H + E + +AT R L +HP+++L+ PHLRYTLE+N R+ L+S G+ + S G
Sbjct: 364 GHLMAEVFTVATMRCLPSIHPVFKLIVPHLRYTLEINVRARNGLVSDFGIFDQIMSTGGG 423
Query: 614 ---EYCMEMSSVIYDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLD 670
+ + + + + + P DL RG+ L ++ +A+D L
Sbjct: 424 GHVQLLQQAGAFLTYRSF-----CPPDDLADRGL------------LGVESSFYAQDALR 466
Query: 671 LWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLKTPQNLI 730
LW I+ ++V + YY V D ELQ+W EI +G + + + L++
Sbjct: 467 LWEIISRYVQGIMGLYYKTDEAVRDDLELQSWCREITEIGLQGAQKQGFPTSLQSVAQAC 526
Query: 731 EILTTIIWVASGHHAAVNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDAL 790
+T I+ +G H++++ GQ + + PN P R+ PT K + + +
Sbjct: 527 HFVTMCIFTCTGQHSSIHLGQLDWFTWVPNAPCTMRL----PPPTTK------DATLETV 576
Query: 791 LYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFEKFSGRLMELEG 850
+ T PN Q+ L ++ + L P LG+ +E + P A EKF L ++
Sbjct: 577 MATLPNLHQSSLQMSIVWQLGRDQPIMVPLGQHQE-EYFSGPEPRAVLEKFREELAIMDK 635
Query: 851 IIDERNGDSTLVNRNGAGVVPYNLLKP 877
I+ RN +PY L+P
Sbjct: 636 EIEVRNEKLD---------IPYEYLRP 653
>pdb|3D3L|A Chain A, The 2.6 A Crystal Structure Of The Lipoxygenase Domain Of
Human Arachidonate 12-Lipoxygenase, 12s-Type (Casp
Target)
pdb|3D3L|B Chain B, The 2.6 A Crystal Structure Of The Lipoxygenase Domain Of
Human Arachidonate 12-Lipoxygenase, 12s-Type (Casp
Target)
Length = 541
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 139/472 (29%), Positives = 197/472 (41%), Gaps = 55/472 (11%)
Query: 389 WFRDEEFARQTLAGLNPCSIQLITEWPLKSSLDPKIYGPRLQESEITKDIIEKELGAMIS 448
W DE F+ Q L G NP ++ T P + L + R Q +EKEL
Sbjct: 68 WQDDELFSYQFLNGANPMLLRRSTSLPSRLVLPSGMEELRAQ--------LEKEL----- 114
Query: 449 VEEAIEQKKLFMLDYHDLFLPYVEKVRKLEHTTLYGSRTVFFLTPDNTLRPLAIELTRPP 508
+ LF D+ L V + E L + + P+ L+P+ I++ P
Sbjct: 115 -----QNGSLFEADF-ILLDGIPANVIRGEKQYLAAPLVMLKMEPNGKLQPMVIQIQPPN 168
Query: 509 MDDKPLWRKVYTPGSWNSTKTWLWRLAKAHVLAHDSGYHQLVSHWLRSHCVVEPYIIATN 568
++ P S W LAK+ V D H++ H L +H V E +AT
Sbjct: 169 PSSPT--PTLFLP----SDPPLAWLLAKSWVRNSDFQLHEIQYHLLNTHLVAEVIAVATM 222
Query: 569 RQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGGVIENTFSPGEYCMEMSSVIYDKQW 628
R L +HPI++ L PH+RYT+E+N R LIS GG+ + S G Q
Sbjct: 223 RCLPGLHPIFKFLIPHIRYTMEINTRARTQLISDGGIFDKAVSTGGGGHVQLLRRAAAQL 282
Query: 629 RFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLDLWGILKQWVTDYVNHYYP 688
+ P DL RG+ L + +A D L LW I+ ++V V+ +Y
Sbjct: 283 TYCSLCPPDDLADRGL------------LGLPGALYAHDALRLWEIIARYVEGIVHLFYQ 330
Query: 689 DQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLKTPQNLIEILTTIIWVASGHHAAVN 748
+V+ D ELQAW EI VG +D + ++ L LT ++ + HAA+N
Sbjct: 331 RDDIVKGDPELQAWCREITEVGLCQAQDRGFPVSFQSQSQLCHFLTMCVFTCTAQHAAIN 390
Query: 749 FGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYT----FPNQDQAILVI 804
GQ + A+ PN P R MP PT K ED + T P+ QA L +
Sbjct: 391 QGQLDWYAWVPNAPCTMR--MP--PPTTK---------EDVTMATVMGSLPDVRQACLQM 437
Query: 805 ATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFEKFSGRLMELEGIIDERN 856
A LS PD LG KE + P A +F L +LE I RN
Sbjct: 438 AISWHLSRRQPDMVPLGHHKE-KYFSGPKPKAVLNQFRTDLEKLEKEITARN 488
>pdb|3RDE|A Chain A, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|B Chain B, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|C Chain C, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|D Chain D, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
Length = 573
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 132/494 (26%), Positives = 206/494 (41%), Gaps = 67/494 (13%)
Query: 389 WFRDEEFARQTLAGLNPCSIQLITEWPLKSSLDPKIYGPRLQESEITKDIIEKELGAMIS 448
W D F Q L G NP ++ E P + P + +EL A +
Sbjct: 133 WKEDALFGYQFLNGTNPMLLRHSVELPARLKFPPGM----------------EELQAQL- 175
Query: 449 VEEAIEQKKLFMLDYHDLFLPYVEKVRKLEHTTLYGSRTVFFLTPDNTLRPLAIELTRPP 508
E+ ++ LF D+ L V L + L PD L P+ I+L + P
Sbjct: 176 -EKELQGGTLFEADF-SLLDGIKANVILSSQQYLAVPLVMLKLQPDGKLLPMVIQL-QLP 232
Query: 509 MDDKPLWRKVYTPGSWNSTKTWLWRLAKAHVLAHDSGYHQLVSHWLRSHCVVEPYIIATN 568
+ PL P + +W LAK V + D H+L SH LR H + E +AT
Sbjct: 233 REGSPL-----PPLFLPTDPPMVWLLAKCWVRSSDFQLHELHSHLLRGHLMAEVIAVATM 287
Query: 569 RQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGGVIENTFSPG-----EYCMEMSSVI 623
R L +HPI++LL PH RYT+E+N R+ L+S G+ + S G E ++++
Sbjct: 288 RCLPSIHPIFKLLIPHFRYTMEINVRARNGLVSDLGIFDQVVSTGGGGHVELLRRAAALL 347
Query: 624 YDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLDLWGILKQWVTDYV 683
+ P DL RG+ L ++ +A+D L LW ++ ++V V
Sbjct: 348 -----TYSSFCPPDDLADRGL------------LGVESSFYAQDALRLWEVISRYVEGIV 390
Query: 684 NHYYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLKTPQNLIEILTTIIWVASGH 743
+ +Y V+ D ELQAW E +G +D + L++ + L +T I+ +G
Sbjct: 391 SLHYKTDESVKEDFELQAWCREFTEIGLLGAQDRGFPVSLQSKEQLCHFVTMCIFTCTGQ 450
Query: 744 HAAVNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILV 803
H++ + GQ + + PN P R+ P T + + ++ T PN QA L
Sbjct: 451 HSSNHLGQLDWYTWVPNAPCTMRLPPP----------TTKDATLETVMATLPNFHQASLQ 500
Query: 804 IATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFEKFSGRLMELEGIIDERNGDSTLVN 863
++ L P LG+ +E + P A KF L L+ I+ RN L
Sbjct: 501 MSITWQLGRCQPTMVALGQHEE-EYFSGPGPKAVLTKFREELAALDKDIEVRNAKLAL-- 557
Query: 864 RNGAGVVPYNLLKP 877
PY L+P
Sbjct: 558 -------PYEYLRP 564
>pdb|3DS0|A Chain A, Hiv-1 Capsid C-Terminal Domain Mutant (N183a) In Complex
With An Inhibitor Of Particle Assembly (Cai)
pdb|3DS5|A Chain A, Hiv-1 Capsid C-Terminal Domain Mutant (N183a)
pdb|3DS5|B Chain B, Hiv-1 Capsid C-Terminal Domain Mutant (N183a)
pdb|3DS5|C Chain C, Hiv-1 Capsid C-Terminal Domain Mutant (N183a)
pdb|3DS5|D Chain D, Hiv-1 Capsid C-Terminal Domain Mutant (N183a)
Length = 86
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 669 LDLWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLKTPQN 728
LD+ K+ DYV+ +Y ++ E++AW TE V +A+ + L
Sbjct: 6 LDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKAWMTETLLVQNANPDCKTILKALGPGAT 65
Query: 729 LIEILTTIIWVAS-GHHAAV 747
L E++T V GH A V
Sbjct: 66 LEEMMTACQGVGGPGHKARV 85
>pdb|4GD3|A Chain A, Structure Of E. Coli Hydrogenase-1 In Complex With
Cytochrome B
pdb|4GD3|B Chain B, Structure Of E. Coli Hydrogenase-1 In Complex With
Cytochrome B
Length = 235
Score = 31.6 bits (70), Expect = 2.0, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 513 PLWRKVYTPGSWNSTKTWLWRLAKAHVLAHDSGYHQLVSHWLRSHCVVEPYIIATNRQLS 572
P+WRK + G W + W L A + D G++ + + + ++ ++I T L
Sbjct: 95 PVWRKSWWQGVWYEIR---WYLFLAKRPSADIGHNPIAQAAMFGYFLMSVFMIITGFALY 151
Query: 573 VMHPIYRLLHPHLRYTLEL 591
H Y + P RY +E
Sbjct: 152 SEHSQYAIFAP-FRYVVEF 169
>pdb|1TV7|A Chain A, Structure Of The S-adenosylmethionine Dependent Enzyme
Moaa
pdb|1TV7|B Chain B, Structure Of The S-adenosylmethionine Dependent Enzyme
Moaa
pdb|1TV8|A Chain A, Structure Of Moaa In Complex With S-Adenosylmethionine
pdb|1TV8|B Chain B, Structure Of Moaa In Complex With S-Adenosylmethionine
pdb|2FB3|A Chain A, Structure Of Moaa In Complex With 5'-Gtp
pdb|2FB3|B Chain B, Structure Of Moaa In Complex With 5'-Gtp
Length = 340
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 51/126 (40%), Gaps = 7/126 (5%)
Query: 339 ELFNEDGFSLPEAEPGFLNSLARFAKTLKEMGEEVFQFDAPEAMLRDKFFWFRDEEFARQ 398
E+F +D LP+ E + +AR AK E+G + + E ++R RD +
Sbjct: 35 EVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEPLMR------RDLDVLIA 88
Query: 399 TLAGLNPC-SIQLITEWPLKSSLDPKIYGPRLQESEITKDIIEKELGAMISVEEAIEQKK 457
L ++ I L T L K+Y L+ ++ D I+ L I+
Sbjct: 89 KLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLFQSINNRNIKATTI 148
Query: 458 LFMLDY 463
L +DY
Sbjct: 149 LEQIDY 154
>pdb|2FB2|A Chain A, Structure Of The Moaa Arg17266268ALA TRIPLE MUTANT
pdb|2FB2|B Chain B, Structure Of The Moaa Arg17266268ALA TRIPLE MUTANT
Length = 340
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 7/106 (6%)
Query: 339 ELFNEDGFSLPEAEPGFLNSLARFAKTLKEMGEEVFQFDAPEAMLRDKFFWFRDEEFARQ 398
E+F +D LP+ E + +AR AK E+G + + E ++R RD +
Sbjct: 35 EVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEPLMR------RDLDVLIA 88
Query: 399 TLAGLNPC-SIQLITEWPLKSSLDPKIYGPRLQESEITKDIIEKEL 443
L ++ I L T L K+Y L+ ++ D I+ L
Sbjct: 89 KLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTL 134
>pdb|3GTY|X Chain X, Promiscuous Substrate Recognition In Folding And Assembly
Activities Of The Trigger Factor Chaperone
Length = 433
Score = 30.0 bits (66), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 307 MKDYKSMCHAALPYIEKFFDGDKKFEYFTEIDELFN----EDGFSLPEAEPGFLNSLARF 362
+KD + IE+ ++G KK+ Y E++E++ E G L ++ +L +
Sbjct: 193 VKDLVGKKKGDVVEIEREYEG-KKYTYKLEVEEVYKRTLPEIGDELAKSVNNEFETLEQL 251
Query: 363 AKTLKEMGEEVFQFDAPEAM 382
++LK+ G+E++ + E+M
Sbjct: 252 KESLKKEGKEIYDVEMKESM 271
>pdb|3GU0|A Chain A, Promiscuous Substrate Recognition In Folding And Assembly
Activities Of The Trigger Factor Chaperone
Length = 412
Score = 30.0 bits (66), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 307 MKDYKSMCHAALPYIEKFFDGDKKFEYFTEIDELFN----EDGFSLPEAEPGFLNSLARF 362
+KD + IE+ ++G KK+ Y E++E++ E G L ++ +L +
Sbjct: 193 VKDLVGKKKGDVVEIEREYEG-KKYTYKLEVEEVYKRTLPEIGDELAKSVNNEFETLEQL 251
Query: 363 AKTLKEMGEEVFQFDAPEAM 382
++LK+ G+E++ + E+M
Sbjct: 252 KESLKKEGKEIYDVEMKESM 271
>pdb|1RQG|A Chain A, Methionyl-Trna Synthetase From Pyrococcus Abyssi
Length = 722
Score = 30.0 bits (66), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 29/116 (25%)
Query: 273 QHYESDPLKEKRDKYIYVPRDETFSDVK----QEAFDNMKDYKSMCHAALPYIEKFFDGD 328
++Y + + E RD D +FSD K +E +N+ ++ H AL ++ ++FDG
Sbjct: 368 RYYLTTIMPETRDS------DFSFSDFKVRINEELVNNLGNF---VHRALTFVNRYFDG- 417
Query: 329 KKFEYFTEIDELFNEDGFSLPEAEPGFLNSLARFAKTLKEMGEEVFQFDAPEAMLR 384
E+DEL E +L K KE+GE + + +A+ R
Sbjct: 418 -VVPERGELDELDRE--------------ALEEIEKAFKEVGELIMNYRFKDALKR 458
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.137 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,535,062
Number of Sequences: 62578
Number of extensions: 1412166
Number of successful extensions: 3200
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 3002
Number of HSP's gapped (non-prelim): 43
length of query: 894
length of database: 14,973,337
effective HSP length: 108
effective length of query: 786
effective length of database: 8,214,913
effective search space: 6456921618
effective search space used: 6456921618
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)