Query 002670
Match_columns 894
No_of_seqs 300 out of 676
Neff 5.1
Searched_HMMs 46136
Date Fri Mar 29 04:44:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002670.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002670hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02305 lipoxygenase 100.0 1E-265 2E-270 2289.5 70.1 820 60-894 82-918 (918)
2 PLN02264 lipoxygenase 100.0 3E-263 7E-268 2268.9 68.2 816 63-894 88-919 (919)
3 PLN02337 lipoxygenase 100.0 1E-259 2E-264 2247.5 69.4 818 62-894 21-866 (866)
4 PF00305 Lipoxygenase: Lipoxyg 100.0 7E-204 2E-208 1773.9 31.8 657 210-878 1-667 (667)
5 cd01751 PLAT_LH2 PLAT/ LH2 dom 100.0 4.6E-37 1E-41 298.6 13.1 130 62-201 3-137 (137)
6 smart00308 LH2 Lipoxygenase ho 99.1 3E-10 6.5E-15 105.4 10.5 83 98-188 20-104 (105)
7 PF01477 PLAT: PLAT/LH2 domain 98.7 4.3E-08 9.4E-13 91.3 7.7 65 135-199 46-113 (113)
8 cd00113 PLAT PLAT (Polycystin- 98.5 7.7E-07 1.7E-11 84.0 11.5 65 135-199 49-116 (116)
9 cd02899 PLAT_SR Scavenger rece 98.0 2.8E-05 6E-10 74.1 9.3 79 98-189 20-99 (109)
10 cd01756 PLAT_repeat PLAT/LH2 d 97.7 0.00056 1.2E-08 65.8 11.8 95 98-199 20-118 (120)
11 cd01753 PLAT_LOX PLAT domain o 97.5 0.00063 1.4E-08 65.1 9.7 83 98-189 20-105 (113)
12 cd01757 PLAT_RAB6IP1 PLAT/LH2 97.3 0.00097 2.1E-08 64.1 7.9 49 143-191 49-100 (114)
13 cd01752 PLAT_polycystin PLAT/L 97.2 0.0023 5.1E-08 61.5 10.4 86 98-191 20-109 (120)
14 cd01754 PLAT_plant_stress PLAT 96.8 0.0045 9.8E-08 60.8 7.9 56 134-191 58-119 (129)
15 PF03802 CitX: Apo-citrate lya 32.7 41 0.00089 34.8 3.2 50 207-269 87-136 (170)
16 TIGR03124 ctirate_citX holo-AC 29.5 25 0.00053 36.4 1.0 52 205-269 83-134 (165)
17 PF07157 DNA_circ_N: DNA circu 28.9 16 0.00034 34.4 -0.5 69 642-723 11-89 (93)
18 PF10281 Ish1: Putative stress 27.1 93 0.002 24.2 3.6 31 695-734 5-35 (38)
19 PF10474 DUF2451: Protein of u 24.7 43 0.00094 36.3 1.9 24 676-705 178-201 (234)
20 PRK01392 citX 2'-(5''-triphosp 22.4 40 0.00088 35.3 1.0 54 204-269 88-143 (180)
21 PF12588 PSDC: Phophatidylseri 21.1 1.6E+02 0.0035 29.9 4.9 126 692-838 11-139 (141)
No 1
>PLN02305 lipoxygenase
Probab=100.00 E-value=1.1e-265 Score=2289.47 Aligned_cols=820 Identities=49% Similarity=0.905 Sum_probs=781.8
Q ss_pred ccccceEEeeecc-eeeeeeEEEeeccccccccccccCceEEEEEEeccccCCCCCcc---eeeccccccCCCCCCcceE
Q 002670 60 KNIEAIATSTEKS-VSVINAVVTVKATWKDDYEDYLFGRTLRLELVSAELDHTTGSEK---STIYAHASKAGKDKHGNEL 135 (894)
Q Consensus 60 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~~g~~~~l~lvs~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 135 (894)
..++|+|++|+|+ +++ ++ +.++++|+++| ++||+|+|||||++++++||+|| ++|++|+++. ...+++++
T Consensus 82 ~~i~~~v~~~~~~~~~~-~~---~~~~~~d~~~~-~~g~~v~lqLvS~~~~~~~g~gk~~~~~l~~~~~~~-~~~~~~~~ 155 (918)
T PLN02305 82 IDVRAVITIRKKIKEKI-TE---KFEDQWEYFMN-GIGQGILIQLVSEEIDPVTGSGKSVESSVRGWLPKP-SNDPHIVE 155 (918)
T ss_pred CeEEEEEEEEeecccch-hh---cccchhhHHHH-hhCCeEEEEEEeccccCCCCCcccccchhhccccCC-CCCCCceE
Confidence 3458889999887 566 55 34677999999 99999999999999999999655 8999999873 33255679
Q ss_pred EEEEEecCCCCCceeEEEEEeCCCCceeEeeEEEecCCCCCcEEEeeccCccCCCCCCCceeeecCcccCCCCCChhhHH
Q 002670 136 YEATFNVPSDFGEVGAMSVENEHHVEIYLMNIVLDGFSNGDPVNITCNSWIQPKNKNEPKRIFFTNKSYLPSQTPDGLKR 215 (894)
Q Consensus 136 y~v~f~~~~~fG~pgai~v~n~~~~e~~l~~i~l~~~p~~~~~~F~cnsWv~~~~~~~~~riff~n~~yLP~~tp~~l~~ 215 (894)
|+++|+||++||+||||+|+|.|++||||++|+|+++|+ |+|||+|||||||+++|+.+||||+||+|||++||+||++
T Consensus 156 ~~~~f~~~~~fG~pGA~~v~N~h~~ef~l~~i~l~~~p~-g~v~f~cnSWv~~~~~~~~~RiFF~nk~ylP~~tP~~l~~ 234 (918)
T PLN02305 156 YAADFTVPFDFGKPGAVLVTNLHGKEFYLMEIVIHGFDD-GPIFFPANTWIHSRKDNPESRIIFRNQAYLPSQTPPGIKD 234 (918)
T ss_pred EEEEEeeccccCCcceEEEEeCCCceEEEEEEEEecCCC-CeEEEeccCccccCCCCCCCceEecCCCcCcccCCHHHHH
Confidence 999999999999999999999999999999999999996 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCCCcccCCCceeeccccCCCCCCCC----CCcccCCCCCCCCcccCCCCCCCCCCCccccCCC---CC
Q 002670 216 FRIEELYHLRGHGQGVRQPSDRIYDYDVYNDLGNPDK----RRPVLGGKKFPYPRRCRTGRQHYESDPLKEKRDK---YI 288 (894)
Q Consensus 216 ~R~~EL~~lrg~g~g~rk~~dRiYdyd~yndlG~pd~----~rpvLgg~~~PyPrr~rTgr~~~~~dp~~e~r~~---~~ 288 (894)
|||+||++|||||+||||+|||||||||||||||||+ +||||||++|||||||||||+|+++||.+|||.. .+
T Consensus 235 ~Re~eL~~lRGdg~Gerk~~dRiYdYd~YNDLG~Pd~~~~~~RpvLGG~~~PYPRR~RTGR~~t~~Dp~~Esr~~~~~~~ 314 (918)
T PLN02305 235 LRREDLLSLRGNGKGERKPHDRIYDYAPYNDLGNPDKDEDLARPVLGGEEWPYPRRCRTGRPPTKKDPLCESRIEKPHPV 314 (918)
T ss_pred HHHHHHHHhcCCCCCcCCccccccchhhhccCCCCCCCccccCcccCCCCCCCCCcCcCCCCCCCCCCcccccccCCCCc
Confidence 9999999999999999999999999999999999998 8999999669999999999999999999999954 47
Q ss_pred ccCCCCCcChhhhccccccchhhHHHhhhhhhhhhhc-CCCCCCCCHHHHHHhhhcCCCCCCCCc-chhhhh-HH-HHHH
Q 002670 289 YVPRDETFSDVKQEAFDNMKDYKSMCHAALPYIEKFF-DGDKKFEYFTEIDELFNEDGFSLPEAE-PGFLNS-LA-RFAK 364 (894)
Q Consensus 289 yvPrDe~f~~~K~~~f~~~~~~k~~~~~~~p~l~~~~-~~~~~f~sf~di~~Ly~~~g~~~~~~~-~~~~~~-~~-~~~~ 364 (894)
||||||+|+++|++||.+ +++||++|.++|.|++++ .+..+|++|+||++||+ +|++||... +.+.+. +| .+.+
T Consensus 315 YvPrDE~f~~~K~~~f~~-~~lk~~~~~~~p~~~~~~~~~~~~F~~f~~i~~Ly~-~g~~l~~~~~~~~~~~p~~~~~~~ 392 (918)
T PLN02305 315 YVPRDETFEEIKRNTFSA-GRLKALLHNLIPSIAAALSSSDIPFTCFSDIDKLYN-DGILLKTEEPKDIGLNPFLGNFMK 392 (918)
T ss_pred CCCCCCCcccchhhhHHH-HHHHHHHHhhhhHHHHhcCCCCCCCCCHHHHHHHhc-cCCcCCchhhhhhhcCCchHHHHH
Confidence 999999999999999999 999999999999999988 67899999999999999 999999742 222232 43 5666
Q ss_pred HHhhcCccccccCchhhhhccccCccccHHHHHHHhhCCCcccccccccCCCCCCCCccccCCCCccCcchHHHHHHhcC
Q 002670 365 TLKEMGEEVFQFDAPEAMLRDKFFWFRDEEFARQTLAGLNPCSIQLITEWPLKSSLDPKIYGPRLQESEITKDIIEKELG 444 (894)
Q Consensus 365 ~~~~~~~~~~~~p~P~~i~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~s~ldp~~yg~~~~~s~It~e~i~~~l~ 444 (894)
.+.+++|.+||||+|+||++|+++|++|+|||||+|||+||++|+||++||++|+|||++||+ ++|+||+|||+..|+
T Consensus 393 ~i~~~~~~~lkf~~P~vi~~d~~~W~~DeeFaRQ~LaGvNP~~I~rl~efP~~skldp~~yG~--~~s~iT~e~ve~~L~ 470 (918)
T PLN02305 393 QVLSVSERLLKYDIPAVIKRDRFAWLRDNEFARQALAGVNPVNIEILKEFPILSKLDPAVYGP--PESALTEELIERELE 470 (918)
T ss_pred HhhhcccccccCCCcceeecccccccChHHHHHHHHcCCCChheeeccccCCccccCccccCC--cCCCcCHHHHHhhcC
Confidence 668889999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred CcccHHHHHhcCcEEEeccccccccchhccccCCCceeeccceEEeecCCCceeeEEEEecCCCCCCCCCCceeeeCCCC
Q 002670 445 AMISVEEAIEQKKLFMLDYHDLFLPYVEKVRKLEHTTLYGSRTVFFLTPDNTLRPLAIELTRPPMDDKPLWRKVYTPGSW 524 (894)
Q Consensus 445 g~~Tl~eal~~grLFi~Dy~d~~lp~l~~in~~~g~~~yA~~~Lffl~~dG~L~PlAIqL~~p~~~~~~~~~~VftP~D~ 524 (894)
| +||+|||++|||||+||||++|||+.++|.++++++|||+||||++++|+|+||||||+++++++++.+++||||. +
T Consensus 471 G-~TleeAl~~~rLFIlDy~dl~lp~l~~in~l~~~~~YAprtLffL~~dG~L~PlAIqL~~~p~~~~p~~~~VftP~-~ 548 (918)
T PLN02305 471 G-MTVEKAIEEKRLFILDYHDMLLPFIEKMNSLPERKAYASRTVFFYSKAGALRPIAIELSLPPTPSSPGNKFVYTHG-H 548 (918)
T ss_pred C-CcHHHHHHcCCEEEEechhhhCcccccccccCCcccccceeEEEECCCCCEeeEEEEeeCCCCCCCCCcceeeCCC-C
Confidence 8 9999999999999999999999999999999999999999999999999999999999999988777788999998 5
Q ss_pred CCCCchhHHHHHHHHHhhcchhhhhhhhhhhcccchhHHHHHHhccCCccCchhhhccchhhhhccchHHHhhccccCCc
Q 002670 525 NSTKTWLWRLAKAHVLAHDSGYHQLVSHWLRSHCVVEPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGG 604 (894)
Q Consensus 525 ~~~~~~~W~LAK~~v~~aD~~~HqlisHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~~gG 604 (894)
+++++|.|+||||||++||++|||+|+||++|||||||||||||||||++|||||||+||||+||+||++||++|||+||
T Consensus 549 d~~~~w~W~LAK~~V~~aD~~~HQlisHlLrTHlv~EpfiIAT~RqLs~~HPI~kLL~PHfr~TL~INalAR~~LIn~gG 628 (918)
T PLN02305 549 DATTHWIWKLAKAHVCSNDAGVHQLVNHWLRTHACMEPYIIATHRQLSAMHPIYKLLHPHMRYTLEINALARQSLINGGG 628 (918)
T ss_pred CCCCchHHHHHHHHHHhccHHHHHHHHHHhhHHHHHHHHHHHHhccCCccCCHHHHHHHHHHHHHHHHHHHHHhccCCCC
Confidence 66789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCchhHHHHHHHHHHhcccCCCccccchHHHhcCCCCCCCCccccccccccCCccchhhHHHHHHHHHHHHhhcc
Q 002670 605 VIENTFSPGEYCMEMSSVIYDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLDLWGILKQWVTDYVN 684 (894)
Q Consensus 605 iie~~f~~G~~~~elss~~Y~~~w~F~~~~LP~DL~~RG~~~~D~~~~hgl~l~l~dYpYadDGL~IW~AIk~~V~~yv~ 684 (894)
++|++|++|+|+|||++++|++.|+|++++||+||++|||+++|+++|||+++.|||||||+|||+||+||++||++||+
T Consensus 629 iie~~fspg~~~~elss~aYk~~w~Fd~~~LP~DL~kRGva~~D~~~p~gl~l~ipdYPYrdDGL~IW~AIk~wV~~yV~ 708 (918)
T PLN02305 629 IIEACFSPGKYAMELSSAAYKSMWRFDMEALPADLIRRGMAEEDPSMPCGVRLVIEDYPYAADGLLIWSAIKEWVESYVD 708 (918)
T ss_pred ceeeeeccchhHHHHHHHHHHhcCcCccccCHHHHHHcCCCccCCCCcccccccCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccCChHHHHHHHHHHhhcCCCCCCCCCCCCCCChhHHHHHHhHHhhhcccccccccccccccccccCCCccc
Q 002670 685 HYYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLKTPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFPNRPTI 764 (894)
Q Consensus 685 ~YY~~D~~V~~D~ELQaW~~Ei~~~Gh~d~kd~p~~P~l~T~~~Lv~~lT~iIw~aSaqHAAVNfgQy~y~gf~PN~P~~ 764 (894)
+||++|++|++|.|||+||+||+++||+|+++.+|||+|+|+++||++||+|||+|||||||||||||+|+||+||+|++
T Consensus 709 ~YY~~D~~V~~D~ELQaW~~Ei~~~Gh~d~kd~~~~p~l~T~~eLi~~lT~IIwtaSaqHAAVNFgQydy~gfvPN~P~~ 788 (918)
T PLN02305 709 HFYSEPNSITSDLELQAWWDEIKNKGHYDKRNEPWWPKLNTKEDLSGILTTMIWIASGQHAAINFGQYPFGGYVPNRPTL 788 (918)
T ss_pred hhCCChhhhccCHHHHHHHHHHHhcCCCCCCCCCCCcCCcCHHHHHHHHHhhhhhcchhhhhhhcCCcccccccCCCchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCChhhHhhhhcCcHHHHHhcCCCHHHHHHHHHHHHhhcCCCCCCccccCCCCC--CCCCCHHHHHHHHHHH
Q 002670 765 ARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEP--AWGEDPVINAAFEKFS 842 (894)
Q Consensus 765 ~r~p~P~~kkg~~e~~~~~~~~e~~~L~tlP~~~qa~~~m~~~~~LS~h~~de~yLG~~~~~--~~~~d~~~~~a~~~F~ 842 (894)
||++||++ +..+|++|+.+||++||++||++.||+.+|+++++||+|++||+|||++.++ .|+.|+++++||++|+
T Consensus 789 ~Rrp~P~~--~~~~~~~l~~~pe~~~L~tLP~~~qa~~~mav~~iLS~hs~de~yLG~~~~~~~~w~~D~~~~~A~~rF~ 866 (918)
T PLN02305 789 MRKLIPQE--NDPDYEKFIRNPQYTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGELRHLHSHWINDHEVVKLFNKFS 866 (918)
T ss_pred hcCCCCCC--CCchHHHhhhChHHHHHHHCCcHHHHHHHHHHHHHhccCCCCcccccCCCCcccccccCHHHHHHHHHHH
Confidence 99999988 6778999999999999999999999999999999999999999999999876 7999999999999999
Q ss_pred HHHHHHHHHHhhhcCCCcccccCCCccCCceeecCCCCCCCccCCCCccccC
Q 002670 843 GRLMELEGIIDERNGDSTLVNRNGAGVVPYNLLKPYWKDGDKEKGVPYSISI 894 (894)
Q Consensus 843 ~~L~~Ie~~I~~RN~~~~lknr~g~~~~PY~~L~Pss~~g~t~~gIPnSIsI 894 (894)
++|++||++|++||++++||||+||+++||+||+|+++||||||||||||||
T Consensus 867 ~~L~eIE~~I~~RN~~~~lkNR~G~~~~PY~lL~P~s~~G~T~rgIPNSISI 918 (918)
T PLN02305 867 ARLEEIEKTINERNKDIRLKNRNGAGIPPYELLLPTSGPGVTGRGIPNSISI 918 (918)
T ss_pred HHHHHHHHHHHHHhCCccccccCCCCCCCccccCCCCCCCCCcCCCCCcccC
Confidence 9999999999999999999999999999999999999999999999999998
No 2
>PLN02264 lipoxygenase
Probab=100.00 E-value=3e-263 Score=2268.94 Aligned_cols=816 Identities=47% Similarity=0.878 Sum_probs=775.7
Q ss_pred cceEEeeecc-eeeeeeEEEeeccccccccccccCceEEEEEEeccccCCCCCcc----eeeccccccCCCCCCcceEEE
Q 002670 63 EAIATSTEKS-VSVINAVVTVKATWKDDYEDYLFGRTLRLELVSAELDHTTGSEK----STIYAHASKAGKDKHGNELYE 137 (894)
Q Consensus 63 ~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~~g~~~~l~lvs~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~y~ 137 (894)
+|+|++|+++ +++ ++ +.++++|+++| ++||+|+|||||+++||+||+|+ ++|++|+++ ....+++++|+
T Consensus 88 ~~~v~~~~~~~~~~-~~---~~~~~~D~~~~-~~G~~v~lqLVSs~~~~~tg~~~~~~~a~l~~~~~~-~~~~~~~~~y~ 161 (919)
T PLN02264 88 RAVVTVRNKNKEDL-KE---TLVKHLDAFTD-KIGRNVVLELISTQVDPKTKEPKKSKAAVLKDWSKK-SNIKAERVHYT 161 (919)
T ss_pred EEEEEEEeccccch-hh---cccchhhHHHH-HhCCeEEEEEEeccccCCCCCccCCCcchhcccccC-CCCCCCceEEE
Confidence 6667777665 455 44 23566899999 99999999999999999998433 899999987 34356667999
Q ss_pred EEEecCCCCCceeEEEEEeCCCCceeEeeEEEecCCCCCcEEEeeccCccCCCCCCCceeeecCcccCCCCCChhhHHHH
Q 002670 138 ATFNVPSDFGEVGAMSVENEHHVEIYLMNIVLDGFSNGDPVNITCNSWIQPKNKNEPKRIFFTNKSYLPSQTPDGLKRFR 217 (894)
Q Consensus 138 v~f~~~~~fG~pgai~v~n~~~~e~~l~~i~l~~~p~~~~~~F~cnsWv~~~~~~~~~riff~n~~yLP~~tp~~l~~~R 217 (894)
++|+||++||+||||+|+|.|++||||++|+|+++|+ |+|||+|||||||+++|+++||||+||+|||++||+||++||
T Consensus 162 ~~F~~~~~fG~pGAi~V~N~h~~EffL~~itle~~p~-g~v~F~cnSWV~p~~~~~~~RiFF~Nk~YLP~~tP~~l~~~R 240 (919)
T PLN02264 162 AEFTVDSAFGSPGAITVTNKHQKEFFLESITIEGFAC-GPVHFPCNSWVQSQKDHPGKRIFFTNQPYLPSETPAGLRALR 240 (919)
T ss_pred EEEEeccccCCcceEEEEeCCCceEEEEEEEeccCCC-CcEEEecCCccccCcCCCCCceEecCCCcCcccCCHHHHHHH
Confidence 9999999999999999999999999999999999996 899999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCCCcccCCCceeeccccCCCCCCCC----CCcccCCCCCCCCcccCCCCCCCCCCCccccCCC---CCcc
Q 002670 218 IEELYHLRGHGQGVRQPSDRIYDYDVYNDLGNPDK----RRPVLGGKKFPYPRRCRTGRQHYESDPLKEKRDK---YIYV 290 (894)
Q Consensus 218 ~~EL~~lrg~g~g~rk~~dRiYdyd~yndlG~pd~----~rpvLgg~~~PyPrr~rTgr~~~~~dp~~e~r~~---~~yv 290 (894)
|+||++|||||+||||+|||||||||||||||||+ +||||||++|||||||||||+|+++||.+|||.. .+||
T Consensus 241 e~eL~~lRGdg~Gerk~~dRiYdYd~YNDLG~Pd~~~~~~RpvLGG~~~PYPRR~RTGR~~t~~dp~~Esr~~~~~~iYv 320 (919)
T PLN02264 241 EKELRNLRGDGKGVRKLSDRIYDFDVYNDLGNPDKSRELARPTLGGKKIPYPRRCRTGRLPTDSDMMAESRVEKPLPMYV 320 (919)
T ss_pred HHHHHHhcCCCCCcCCcccchhhhhhhccCCCCCCCccccCcccCCCCCCCCCCCcCCCCCCCCCCcccccccCCCceeC
Confidence 99999999999999999999999999999999998 8999999669999999999999999999999954 4799
Q ss_pred CCCCCcChhhhccccccchhhHHHhhhhhhhhhhcCCCCCCCCHHHHHHhhhcCCCCCCCCc-chhhhh--HHHHHHHHh
Q 002670 291 PRDETFSDVKQEAFDNMKDYKSMCHAALPYIEKFFDGDKKFEYFTEIDELFNEDGFSLPEAE-PGFLNS--LARFAKTLK 367 (894)
Q Consensus 291 PrDe~f~~~K~~~f~~~~~~k~~~~~~~p~l~~~~~~~~~f~sf~di~~Ly~~~g~~~~~~~-~~~~~~--~~~~~~~~~ 367 (894)
||||+|+++|+++|.+ +++||++|.++|.|+++++.. +|+||+||++||+ +|++||... ++..+. +|.+.+.+.
T Consensus 321 PrDE~f~~~K~~~f~~-~~lk~~~~~~~p~~~~~~~~~-~F~~f~~i~~Ly~-~g~~l~~~~~~~~~~~~p~~~~~~~~~ 397 (919)
T PLN02264 321 PRDEQFEESKQDTFAA-GRLKAVLHNLIPSLKASILAE-DFANFGEIDSLYK-EGLLLKLGFQDDIFKKFPLPKVVTTLQ 397 (919)
T ss_pred CCCCCcccchhhhHHH-HHHHHHHHHhhhhhhhhcCCC-CCCCHHHHHHHHh-cCCcCCcchhhhHhhcCChHHHHHHhh
Confidence 9999999999999999 999999999999999988433 9999999999999 999999752 223333 546666778
Q ss_pred hcCccccccCchhhhhccccCccccHHHHHHHhhCCCcccccccccCCCCCCCCccccCCCCccCcchHHHHHHhcCCcc
Q 002670 368 EMGEEVFQFDAPEAMLRDKFFWFRDEEFARQTLAGLNPCSIQLITEWPLKSSLDPKIYGPRLQESEITKDIIEKELGAMI 447 (894)
Q Consensus 368 ~~~~~~~~~p~P~~i~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~s~ldp~~yg~~~~~s~It~e~i~~~l~g~~ 447 (894)
++++.+||||+|++|++|+++|++|+|||||+|||+||++|+||++||++|+|||+.||+ ++|+||++||+..|+| +
T Consensus 398 ~~~~~~lkf~~P~vi~~d~~~W~~DeeFarQ~LaGvNP~~I~rl~e~P~~s~ld~~~yg~--~~s~it~e~v~~~L~G-~ 474 (919)
T PLN02264 398 ESSEGLLKYDTPKILSKDKFAWLRDDEFARQAIAGINPVNIERVKVFPPVSNLDPEIYGP--QHSALTEDHIIGHLDG-L 474 (919)
T ss_pred hcccccccCCCCceeecChhhccCHHHHHHHHHcCCCchhhhhhhhcCCCCCCCHhhcCC--ccchhhHHHHhhccCC-C
Confidence 889999999999999999999999999999999999999999999999999999999999 9999999999999998 9
Q ss_pred cHHHHHhcCcEEEeccccccccchhccccCCCceeeccceEEeecCCCceeeEEEEecCCCCCCCCCCceeeeCCCCCCC
Q 002670 448 SVEEAIEQKKLFMLDYHDLFLPYVEKVRKLEHTTLYGSRTVFFLTPDNTLRPLAIELTRPPMDDKPLWRKVYTPGSWNST 527 (894)
Q Consensus 448 Tl~eal~~grLFi~Dy~d~~lp~l~~in~~~g~~~yA~~~Lffl~~dG~L~PlAIqL~~p~~~~~~~~~~VftP~D~~~~ 527 (894)
||+|||++|||||+||||++|||++++|.++|+++|||+||||++++|+|+||||||+++++++++++++||||+ ++++
T Consensus 475 Tl~eAl~~~rLFilDy~d~~lp~l~~in~~~g~~~YAprtLFfL~~dG~L~PlAIqL~~p~~~~~~~~~~VftP~-~d~~ 553 (919)
T PLN02264 475 SVQQALEENRLFMVDYHDIYLPFLDRINALDGRKAYATRTIFFLTRLGTLKPIAIELSLPPSGPNSRSKRVVTPP-VDAT 553 (919)
T ss_pred cHHHHHHcCCEEEEeChhhhhhhhhhhccCCCcEeEcceEEEEECCCCCEeeEEEEecCCCCCCCcCcceeECCC-CCCC
Confidence 999999999999999999999999999999999999999999999999999999999999877766788999997 5667
Q ss_pred CchhHHHHHHHHHhhcchhhhhhhhhhhcccchhHHHHHHhccCCccCchhhhccchhhhhccchHHHhhccccCCcccc
Q 002670 528 KTWLWRLAKAHVLAHDSGYHQLVSHWLRSHCVVEPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGGVIE 607 (894)
Q Consensus 528 ~~~~W~LAK~~v~~aD~~~HqlisHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~~gGiie 607 (894)
++|.|+||||||++||++|||+|+||++||++||||||||+||||.+|||||||.||||+||+||++||++|||+||++|
T Consensus 554 ~~w~W~LAK~~V~~aD~~~HQlisHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~TL~INalAR~~LIn~gGiid 633 (919)
T PLN02264 554 SNWMWQLAKAHVCSNDAGVHQLVNHWLRTHACLEPFILAAHRQLSAMHPIFKLLDPHMRYTLEINALARQTLISADGVIE 633 (919)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhhhhcccCCccCcHHHHHHHHHHHHHHHHHHHHHhccCCCceEE
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCchhHHHHHHHHHHhcccCCCccccchHHHhcCCCCCCCCccccccccccCCccchhhHHHHHHHHHHHHhhccccc
Q 002670 608 NTFSPGEYCMEMSSVIYDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLDLWGILKQWVTDYVNHYY 687 (894)
Q Consensus 608 ~~f~~G~~~~elss~~Y~~~w~F~~~~LP~DL~~RG~~~~D~~~~hgl~l~l~dYpYadDGL~IW~AIk~~V~~yv~~YY 687 (894)
++|++|+|+|||++++|++.|+|++++||+||++|||+++|+++|||+++.|||||||+|||+||+||++||++||++||
T Consensus 634 ~~f~pg~~~~elss~aYk~~W~F~~~~LP~DL~~RGv~~~D~~~phgl~l~ipdYPYrdDGL~iW~AIk~~V~~yv~~YY 713 (919)
T PLN02264 634 SCFTAGQYGMEISAAAYKNSWRFDMEGLPADLIRRGMAVPDPTQPHGLKLLIEDYPYANDGLLLWSAIQTWVRTYVERYY 713 (919)
T ss_pred EeeccchhHHHHHHHHHHhccCCccccCHHHHHHcCCCCCCcccccchhhccCCCcchhhHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999966999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCChHHHHHHHHHHhhcCCCCCCCCCCCCCCChhHHHHHHhHHhhhcccccccccccccccccccCCCccccCC
Q 002670 688 PDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLKTPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFPNRPTIARV 767 (894)
Q Consensus 688 ~~D~~V~~D~ELQaW~~Ei~~~Gh~d~kd~p~~P~l~T~~~Lv~~lT~iIw~aSaqHAAVNfgQy~y~gf~PN~P~~~r~ 767 (894)
++|++|++|.|||+||+||++.||+|+++++|||+|+|+++||++||+|||+|||||||||||||+|+||+||+|++||+
T Consensus 714 ~~D~~V~~D~ELQaW~~Ei~~~Gh~d~~d~~~~p~l~T~~eLi~~lT~IIf~aSaqHAAVNFgQydy~gfvPN~P~~~rr 793 (919)
T PLN02264 714 PDPSLICTDKELQAWYSESINVGHADLRDADWWPKLSTVDDLVSILTTLIWLASAQHAALNFGQYPYGGYVPNRPPLMRR 793 (919)
T ss_pred CChhhhcCCHHHHHHHHHHHhccCCCCcCCCCCCCCCCHHHHHHHHHHHHHhhhhhhhhhhcCcccccccCCCCChHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCChhhHhhhhcCcHHHHHhcCCCHHHHHHHHHHHHhhcCCCCCCccccCCCCC-CCCCCHHHHHHHHHHHHHHH
Q 002670 768 NMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEP-AWGEDPVINAAFEKFSGRLM 846 (894)
Q Consensus 768 p~P~~kkg~~e~~~~~~~~e~~~L~tlP~~~qa~~~m~~~~~LS~h~~de~yLG~~~~~-~~~~d~~~~~a~~~F~~~L~ 846 (894)
+||++ ++++|++|+.+|+++||++||++.||+.+|+++++||+|++||+|||++..+ .|+.|+++++||++|+++|+
T Consensus 794 p~P~~--~~~e~~~~~~~pe~~~L~tlP~~~qt~~~ms~~~iLS~hs~dE~yLG~~~~~~~w~~D~~~~~af~rF~~~L~ 871 (919)
T PLN02264 794 LIPDE--SDPEYASFLADPQKYYFSSMPSLLQTTKFMAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVEAFYGFSAEIG 871 (919)
T ss_pred CCCCC--CChhhhhhhcChHHHHHHHCCCHHHHHHHHHHHHHHhhcCCCceeccCCCCccccccCHHHHHHHHHHHHHHH
Confidence 99988 6689999999999999999999999999999999999999999999998765 79999999999999999999
Q ss_pred HHHHHHhhhcCCCcccccCCCccCCceeecCCCCCCCccCCCCccccC
Q 002670 847 ELEGIIDERNGDSTLVNRNGAGVVPYNLLKPYWKDGDKEKGVPYSISI 894 (894)
Q Consensus 847 ~Ie~~I~~RN~~~~lknr~g~~~~PY~~L~Pss~~g~t~~gIPnSIsI 894 (894)
+||++|++||++++||||+||+++||+||+|+++||||||||||||||
T Consensus 872 eIe~~I~~RN~~~~~knR~G~~~~PY~lL~P~s~~G~T~~gIPNSISI 919 (919)
T PLN02264 872 RIEKEIEKRNADPSRRNRCGAGVLPYELLAPSSEPGVTCRGVPNSVSI 919 (919)
T ss_pred HHHHHHHHHcCCccccccCCCCCCCceeeCCCCCCCCCcCCCCCcccC
Confidence 999999999999999999999999999999999999999999999998
No 3
>PLN02337 lipoxygenase
Probab=100.00 E-value=1.1e-259 Score=2247.49 Aligned_cols=818 Identities=45% Similarity=0.822 Sum_probs=778.6
Q ss_pred ccceEEeeecc-eeeeeeEEEeeccccccccccccCceEEEEEEeccccC-CCC-Ccc----eeeccccccCCCCCCcce
Q 002670 62 IEAIATSTEKS-VSVINAVVTVKATWKDDYEDYLFGRTLRLELVSAELDH-TTG-SEK----STIYAHASKAGKDKHGNE 134 (894)
Q Consensus 62 ~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~~g~~~~l~lvs~~~~~-~~~-~~~----~~~~~~~~~~~~~~~~~~ 134 (894)
++|+|++|+|+ +++ ++ +.++++|+++| ++||+|+|||||+++++ +|| +|| ++|++|+++.....++++
T Consensus 21 ~~~~v~l~~k~~ld~-~~---~~~~~lD~~~~-l~G~~v~lqLvS~~~~~p~~g~~gk~~k~a~l~~w~~~~~~~~~~~~ 95 (866)
T PLN02337 21 IKGTVVLMKKNVLDF-ND---FNASVLDRVHE-LLGKGVSLQLISSTVVDPENGLRGKLGKEAYLEKWITTITSLTAGES 95 (866)
T ss_pred EEEEEEEEEecccch-hh---cccchhhhHHH-hcCCeEEEEEEeccccccccCCccccCCccchhhhccCCCCCCCCce
Confidence 39999999998 666 65 35788999999 99999999999999998 677 443 899999987655456677
Q ss_pred EEEEEEecCCCCCceeEEEEEeCCCCceeEeeEEEecCCCCCcEEEeeccCccCCCCCCCceeeecCcccCCCCCChhhH
Q 002670 135 LYEATFNVPSDFGEVGAMSVENEHHVEIYLMNIVLDGFSNGDPVNITCNSWIQPKNKNEPKRIFFTNKSYLPSQTPDGLK 214 (894)
Q Consensus 135 ~y~v~f~~~~~fG~pgai~v~n~~~~e~~l~~i~l~~~p~~~~~~F~cnsWv~~~~~~~~~riff~n~~yLP~~tp~~l~ 214 (894)
+|+|+|+||++||+||||+|+|.|++||||++|+|+++|++|+|||+|||||||+++|+++||||+||+|||++||++|+
T Consensus 96 ~y~~~F~~~~~fG~pGAi~V~N~h~~EffL~sitle~~p~~g~v~f~cnSWV~~~~~~~~~RiFF~nk~ylp~~tP~~l~ 175 (866)
T PLN02337 96 AFKVTFDWDEKIGVPGAFIIKNNHHSEFYLKTVTLEDVPGHGRVHFVCNSWIYPAKRYRYDRVFFSNKTYLPSQTPAPLR 175 (866)
T ss_pred EEEEEEEecccCCCcceEEEEecCCceEEEEEEEEecCCCCCcEEEecCCccccCCCCCCCceEecCCCcCcccccHHHH
Confidence 99999999999999999999999999999999999999988999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCCCcccCCCceeeccccCCCCCCCC----CCcccCC-CCCCCCcccCCCCCCCCCCCccccCCC---
Q 002670 215 RFRIEELYHLRGHGQGVRQPSDRIYDYDVYNDLGNPDK----RRPVLGG-KKFPYPRRCRTGRQHYESDPLKEKRDK--- 286 (894)
Q Consensus 215 ~~R~~EL~~lrg~g~g~rk~~dRiYdyd~yndlG~pd~----~rpvLgg-~~~PyPrr~rTgr~~~~~dp~~e~r~~--- 286 (894)
+|||+||++|||||+||||+|||||||||||||||||+ +|||||| ++|||||||||||+|+++||.+|||..
T Consensus 176 ~~R~~eL~~lrG~g~gerk~~dRiYdyd~YnDlg~pd~~~~~~RpvLGg~~~~pyPRR~rTgr~~t~~dp~~esr~~~~~ 255 (866)
T PLN02337 176 PYREEELVNLRGDGKGELKEWDRVYDYDYYNDLGDPDKGNPYARPVLGGSQEYPYPRRGRTGRKPTKTDPNSESRLPLLS 255 (866)
T ss_pred HHHHHHHHHhcCCCCCCCCcccchhhhhhhccCCCCCCCccccCccCCCCCCCCCCCcccCCCCCCCCCCccccccccCC
Confidence 99999999999999999999999999999999999998 8999999 679999999999999999999999943
Q ss_pred -CCccCCCCCcChhhhccccccchhhHHHhhhhhhhhhhc-CCCCCCCCHHHHHHhhhcCCCCCCCCc--chhhhhHH--
Q 002670 287 -YIYVPRDETFSDVKQEAFDNMKDYKSMCHAALPYIEKFF-DGDKKFEYFTEIDELFNEDGFSLPEAE--PGFLNSLA-- 360 (894)
Q Consensus 287 -~~yvPrDe~f~~~K~~~f~~~~~~k~~~~~~~p~l~~~~-~~~~~f~sf~di~~Ly~~~g~~~~~~~--~~~~~~~~-- 360 (894)
.+||||||+|+++|++||.+ +++||++|.++|.|++++ .+..+|++|+||++||+ +|++||... +.+.+.+|
T Consensus 256 ~~~yvPrDE~f~~~k~~~f~~-~~l~~~~~~~~p~~~~~~~~~~~~f~~f~~i~~ly~-~g~~lp~~~~~~~~~~~~p~~ 333 (866)
T PLN02337 256 LNIYVPRDERFGHLKMSDFLA-YALKAIAQVLVPELEALFDKTPNEFDSFEDVLKLYE-GGIKLPNGPLLEELRKNIPLE 333 (866)
T ss_pred CCcccCCCCCcccchHHHHHH-HHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhh-cCCCCCCchHHHHhhhcChHH
Confidence 57999999999999999999 999999999999999988 67899999999999999 999999853 23333344
Q ss_pred HHHHHHhhcCccccccCchhhhhccccCccccHHHHHHHhhCCCcccccccccCCCCCCCCccccCCCCccCcchHHHHH
Q 002670 361 RFAKTLKEMGEEVFQFDAPEAMLRDKFFWFRDEEFARQTLAGLNPCSIQLITEWPLKSSLDPKIYGPRLQESEITKDIIE 440 (894)
Q Consensus 361 ~~~~~~~~~~~~~~~~p~P~~i~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~s~ldp~~yg~~~~~s~It~e~i~ 440 (894)
.+++.++++++.+++||+|+||++|+++|++|+|||||+|||+||++|+||++||++|+|||++||+ ++|+||++||+
T Consensus 334 ~~~~~~~~~~~~~l~fp~P~vi~~d~~~W~~DeeFarQ~LaG~NP~~I~rl~~~P~~~~ld~~~yg~--~~s~iT~e~v~ 411 (866)
T PLN02337 334 MLKELLRTDGEYLLKFPMPQVIKEDKSAWRTDEEFAREMLAGVNPVVIRRLTEFPPKSKLDPKKYGD--QNSSITEEHIE 411 (866)
T ss_pred HHHHHHhhcccccccCCCCceeecccccccCHHHHHHHHhcCCCChheeecccCCCcccCChhhcCC--ccCccCHHHHH
Confidence 4666668889999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred HhcCCcccHHHHHhcCcEEEeccccccccchhccccCCCceeeccceEEeecCCCceeeEEEEecCCCCCCC--CCCcee
Q 002670 441 KELGAMISVEEAIEQKKLFMLDYHDLFLPYVEKVRKLEHTTLYGSRTVFFLTPDNTLRPLAIELTRPPMDDK--PLWRKV 518 (894)
Q Consensus 441 ~~l~g~~Tl~eal~~grLFi~Dy~d~~lp~l~~in~~~g~~~yA~~~Lffl~~dG~L~PlAIqL~~p~~~~~--~~~~~V 518 (894)
+.|+| +||+|||++|||||+||||++|||+.++|...++ .|||+||||++++|+|+||||||++|+..++ ++.++|
T Consensus 412 ~~L~g-~Tl~eAl~~~rLfi~Dy~d~~lp~l~~in~~~~k-~yA~~tLffl~~dG~L~PlAIqL~~p~~~~~~~g~~~~V 489 (866)
T PLN02337 412 KNLEG-LTVQEALEKNRLFILDHHDALMPYLRRINSTSTK-TYATRTLLFLKDDGTLKPLAIELSLPHPQGDKFGAVSKV 489 (866)
T ss_pred hccCC-ccHHHHHHcCCEEEEecchhcCcccccccCCCCc-cccceeEEEECCCCCEeEEEEEeccCCCCcccCCCCCCe
Confidence 99998 9999999999999999999999999999986554 9999999999999999999999998875433 457899
Q ss_pred eeCCCCCCCCchhHHHHHHHHHhhcchhhhhhhhhhhcccchhHHHHHHhccCCccCchhhhccchhhhhccchHHHhhc
Q 002670 519 YTPGSWNSTKTWLWRLAKAHVLAHDSGYHQLVSHWLRSHCVVEPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDI 598 (894)
Q Consensus 519 ftP~D~~~~~~~~W~LAK~~v~~aD~~~HqlisHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~ 598 (894)
|||+ ++++++|.|+|||+||++||++|||+|+||++||+++|||||||+||||++|||||||.||||+||+||++||++
T Consensus 490 fTP~-~~~~~~~~W~lAK~~v~~aD~~~HqlisHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~~AR~~ 568 (866)
T PLN02337 490 YTPA-EDGVEGSVWQLAKAYVAVNDSGYHQLISHWLNTHAVIEPFVIATNRQLSVLHPIHKLLHPHFRDTMNINALARQI 568 (866)
T ss_pred ECCC-CCCCCcchHHHHHHHHHHhhHHHHHHHHHHhhhhhhHHHHHHHHhccCCCcCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999 455678999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCcccccccCchhHHHHHHHHHHhcccCCCccccchHHHhcCCCCCCCCccccccccccCCccchhhHHHHHHHHHH
Q 002670 599 LISAGGVIENTFSPGEYCMEMSSVIYDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLDLWGILKQW 678 (894)
Q Consensus 599 LI~~gGiie~~f~~G~~~~elss~~Y~~~w~F~~~~LP~DL~~RG~~~~D~~~~hgl~l~l~dYpYadDGL~IW~AIk~~ 678 (894)
||++||++|+++++|+|+|||++++|++ |+|++++||+||++|||+++|+++|||+++.|||||||+|||+||+||++|
T Consensus 569 LI~~gGiid~~~~~g~~~~els~~~yk~-w~F~~~~LP~DL~~RGv~~~D~~~p~g~~l~i~dYPYrdDGL~iW~AI~~~ 647 (866)
T PLN02337 569 LINAGGILESTVFPGKYALEMSSVVYKN-WNFTEQALPADLIKRGVAVEDPSSPHGVRLLIEDYPYAVDGLEIWSAIETW 647 (866)
T ss_pred eeCCCCeeeeeeccchhHHHHHHHHHhc-CCcccccCHHHHHHcCCCccccccccccccccCCCcchhhHHHHHHHHHHH
Confidence 9999999999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccccccccccccCChHHHHHHHHHHhhcCCCCCCCCCCCCCCChhHHHHHHhHHhhhccccccccccccccccccc
Q 002670 679 VTDYVNHYYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLKTPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYF 758 (894)
Q Consensus 679 V~~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~Gh~d~kd~p~~P~l~T~~~Lv~~lT~iIw~aSaqHAAVNfgQy~y~gf~ 758 (894)
|++||++||++|++|++|.|||+||+||+++|||++++++|||+|+|+++||++||+|||+|||||||||||||+|+||+
T Consensus 648 V~~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~G~gd~k~~~~~p~l~T~~eLv~~lT~iIf~aSaqHAAVNfgQy~y~gfv 727 (866)
T PLN02337 648 VKEYCAFYYPTDDMVQGDTELQSWWKEVREEGHGDLKDEPWWPKMQTVAELIESCTIIIWIASALHAAVNFGQYPYAGYL 727 (866)
T ss_pred HHHHHHhhCCchHhhccCHHHHHHHHHHHhcCCCCccCCCCCCccCCHHHHHHHHHhhhhhcchhhhhhhcCCccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCCCCCCCChhhHhhhhcCcHHHHHhcCCCHHHHHHHHHHHHhhcCCCCCCccccCCCCCCCCCCHHHHHHH
Q 002670 759 PNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAF 838 (894)
Q Consensus 759 PN~P~~~r~p~P~~kkg~~e~~~~~~~~e~~~L~tlP~~~qa~~~m~~~~~LS~h~~de~yLG~~~~~~~~~d~~~~~a~ 838 (894)
||+|++||++||++ |+.+|.+|..+||+++|++||++.||+.+|+++++||+|++||+|||+|+++.|+.|+++++|+
T Consensus 728 PN~P~~~r~~~P~~--~~~e~~~l~~~~e~~~L~tlp~~~qt~~~~~l~~lLS~~s~de~yLG~~~~~~w~~d~~~~~a~ 805 (866)
T PLN02337 728 PNRPTVSRRFMPEP--GTPEYEELEKNPDKAFLKTITAQLQTLLGISLIEILSRHSSDEVYLGQRDTPEWTSDAEPLEAF 805 (866)
T ss_pred CCCchhhcCCCCCC--CchhhhhhccCcHHHHHHhCCCHHHHHHHHHHHHHhccCCCCceeccCcCCcccccCHHHHHHH
Confidence 99999999999976 7889999999999999999999999999999999999999999999999988999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCcccccCCCccCCceeecCCC-----CCCCccCCCCccccC
Q 002670 839 EKFSGRLMELEGIIDERNGDSTLVNRNGAGVVPYNLLKPYW-----KDGDKEKGVPYSISI 894 (894)
Q Consensus 839 ~~F~~~L~~Ie~~I~~RN~~~~lknr~g~~~~PY~~L~Pss-----~~g~t~~gIPnSIsI 894 (894)
++|+++|++||++|++||+++.||||+||+++||+||+|++ +||||||||||||||
T Consensus 806 ~~F~~~L~eIe~~I~~RN~~~~~knr~G~~~~PY~lL~P~~~~~~~~~g~t~~gIPNSISI 866 (866)
T PLN02337 806 KRFGERLVEIENRIVDMNKDPRLKNRVGPVKMPYTLLYPNTSDYTGEGGLTGKGIPNSVSI 866 (866)
T ss_pred HHHHHHHHHHHHHHHHHhccchhhcccCCCCCCceeeCCCCccccCCCCcccCCCCCcccC
Confidence 99999999999999999999999999999999999999999 999999999999998
No 4
>PF00305 Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Lipoxygenases (1.13.11.- from EC) are a class of iron-containing dioxygenases which catalyses the hydroperoxidation of lipids, containing a cis,cis-1,4-pentadiene structure. They are common in plants where they may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. In mammals a number of lipoxygenases isozymes are involved in the metabolism of prostaglandins and leukotrienes []. Sequence data is available for the following lipoxygenases: Plant lipoxygenases (1.13.11.12 from EC, IPR001246 from INTERPRO). Plants express a variety of cytosolic isozymes as well as what seems to be a chloroplast isozyme []. Mammalian arachidonate 5-lipoxygenase (1.13.11.34 from EC, IPR001885 from INTERPRO). Mammalian arachidonate 12-lipoxygenase (1.13.11.31 from EC, IPR001885 from INTERPRO). Mammalian erythroid cell-specific 15-lipoxygenase (1.13.11.33 from EC, IPR001885 from INTERPRO). The iron atom in lipoxygenases is bound by four ligands, three of which are histidine residues []. Six histidines are conserved in all lipoxygenase sequences, five of them are found clustered in a stretch of 40 amino acids. This region contains two of the three iron-ligands; the other histidines have been shown [] to be important for the activity of lipoxygenases. This entry represents the C-terminal region of these proteins.; GO: 0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 3FG3_D 3FG1_C 3FG4_D 3DY5_A 2FNQ_B 2P0M_A 3RDE_B 2IUJ_A 1RRL_B 1JNQ_A ....
Probab=100.00 E-value=7.4e-204 Score=1773.89 Aligned_cols=657 Identities=55% Similarity=0.969 Sum_probs=570.8
Q ss_pred ChhhHHHHHHHHHHhhCCCCCcccCCCceeeccccCCCCCCCC----CCcccCC-CCCCCCcccCCCCCCCCCCCccccC
Q 002670 210 PDGLKRFRIEELYHLRGHGQGVRQPSDRIYDYDVYNDLGNPDK----RRPVLGG-KKFPYPRRCRTGRQHYESDPLKEKR 284 (894)
Q Consensus 210 p~~l~~~R~~EL~~lrg~g~g~rk~~dRiYdyd~yndlG~pd~----~rpvLgg-~~~PyPrr~rTgr~~~~~dp~~e~r 284 (894)
|+||+++|++||++|||||+||||+|||||||||||||||||+ +|||||| ++|||||||||||+|+++||.+|+|
T Consensus 1 ~~~l~~~R~~eL~~lrG~g~gerk~~dRiYdYd~YnDLG~pd~~~~~~RpvlGgs~~~PYPRR~RTGr~~~~~Dp~sEsr 80 (667)
T PF00305_consen 1 PAGLKKLREEELKNLRGDGTGERKEWDRIYDYDVYNDLGNPDKGPELARPVLGGSKEFPYPRRCRTGRPPTKTDPKSESR 80 (667)
T ss_dssp SGGGHHHHHHHHHHHHTTS-S---TT-----EE-B-SSSBGGGTGCG----BSSSSSS----EE----SBESSCTTSBGC
T ss_pred ChHHHHHHHHHHHHhcCCCCCccccccceeeeecccCCCCCCCCCcCCCCCCCCCCCCCCCccCCCCCCCCCCCccccCc
Confidence 7899999999999999999999999999999999999999998 8999999 8999999999999999999999999
Q ss_pred CCCCccCCCCCcChhhhccccccchhhHHHhhhhhhhhhhc-CCCCCCCCHHHHHHhhhcCCCCCCCCcchhhhhHH--H
Q 002670 285 DKYIYVPRDETFSDVKQEAFDNMKDYKSMCHAALPYIEKFF-DGDKKFEYFTEIDELFNEDGFSLPEAEPGFLNSLA--R 361 (894)
Q Consensus 285 ~~~~yvPrDe~f~~~K~~~f~~~~~~k~~~~~~~p~l~~~~-~~~~~f~sf~di~~Ly~~~g~~~~~~~~~~~~~~~--~ 361 (894)
...+||||||+|+++|+++|.+ +++||++|.++|.|++++ .+..+|+||+||++||+ +|++||.+ .+.+.+| .
T Consensus 81 ~~~~YVPRDE~F~~~K~~dF~~-~~lks~~~~llP~L~~~~~~~~~eF~sF~dId~LY~-~g~~l~~~--~~~~~~~~~~ 156 (667)
T PF00305_consen 81 SGDIYVPRDERFSEVKQSDFLA-NALKSLLHALLPALKSLFDDTPNEFDSFEDIDDLYE-EGIKLPTD--LLKKLIPLEL 156 (667)
T ss_dssp -SSGGS-GGGS-SCSSGGGHHH-HHHHHHHHTHHHHHHHHTTSSTSSCSSHHHHHHHHT-TTEE--HH--HHCCHTTSTT
T ss_pred cccccCCccccccchhHHHHHH-HHHHHHHHhHHHHHHHHhcccCcccCCHHHHHHHHh-ccccchhh--HhhhcCcHHH
Confidence 8899999999999999999999 999999999999999987 67899999999999999 99998832 1212222 3
Q ss_pred HHHHHhhcCccccccCchhhhhccccCccccHHHHHHHhhCCCcccccccccCCCCCCCCccccCCCCccCcchHHHHHH
Q 002670 362 FAKTLKEMGEEVFQFDAPEAMLRDKFFWFRDEEFARQTLAGLNPCSIQLITEWPLKSSLDPKIYGPRLQESEITKDIIEK 441 (894)
Q Consensus 362 ~~~~~~~~~~~~~~~p~P~~i~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~s~ldp~~yg~~~~~s~It~e~i~~ 441 (894)
+.+.+.++++.+++||+|+|++.++++|++|+|||||+|||+||++|+||++||++++|||++||+ ++++||++||+.
T Consensus 157 ~~~~~~~~~~~~~kf~~p~v~~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~~~ld~~~yg~--~~s~it~e~i~~ 234 (667)
T PF00305_consen 157 LKELFRTDGENILKFPTPQVIERDRFAWRTDEEFARQRLAGVNPVVIRRLTEFPPKSKLDPAIYGD--QESPITDEHIEP 234 (667)
T ss_dssp CCTTSBETSSSEEB----HHHHCHHHHTTSHHHHHHHHHHSSSTTSEEE-SSSSTTS-SSHHCCTS--SB-STTHHHHHH
T ss_pred HHHHHhhcccceeeCCCCccchhhhhccCChHHHHHHHHcCCCchHhhccccCCccccccHhhcCC--ccCCchHHHhhh
Confidence 555666788999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred hcCCcccHHHHHhcCcEEEeccccccccchhccccCCCceeeccceEEeecCCCceeeEEEEecCCCCCCCCCCceeeeC
Q 002670 442 ELGAMISVEEAIEQKKLFMLDYHDLFLPYVEKVRKLEHTTLYGSRTVFFLTPDNTLRPLAIELTRPPMDDKPLWRKVYTP 521 (894)
Q Consensus 442 ~l~g~~Tl~eal~~grLFi~Dy~d~~lp~l~~in~~~g~~~yA~~~Lffl~~dG~L~PlAIqL~~p~~~~~~~~~~VftP 521 (894)
.|+| +||++||++|||||+|||++++|++++||. .+++.|||+||||++++|+|+||||||++|+..+.++.++||||
T Consensus 235 ~l~g-~tl~~al~~~rLfi~Dy~~~~~~~~~~i~~-~~~~~~A~~~Lf~l~~~g~L~PlAIqL~~p~~~~~~~~~~v~tP 312 (667)
T PF00305_consen 235 QLEG-LTLEEALKDGRLFILDYHDLFGPYLNKINE-KGRYAYAPRALFFLNPDGTLKPLAIQLSQPGPEGPPQFNPVFTP 312 (667)
T ss_dssp HCHC-S-HHHHHHTT-EEEEEEGGGTTHHHHHHTT-CCGBG-EEEEEEEEETTSEEEEEEEECSECBTTCS-EEEEEE-T
T ss_pred ccCC-CcHHHHHhcCCeEEEeehhhcccccccccc-CCcEeccceeEEEEcCCCCEeeeEEeccCCCCcccCccceeeec
Confidence 9999 999999999999999999999999999998 78999999999999999999999999988876555667899999
Q ss_pred CCCCCCCchhHHHHHHHHHhhcchhhhhhhhhhhcccchhHHHHHHhccCCccCchhhhccchhhhhccchHHHhhcccc
Q 002670 522 GSWNSTKTWLWRLAKAHVLAHDSGYHQLVSHWLRSHCVVEPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILIS 601 (894)
Q Consensus 522 ~D~~~~~~~~W~LAK~~v~~aD~~~HqlisHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~ 601 (894)
+ .+++.+|.|+|||+||++||+++||+|+||++||+|||||||||+||||.+|||||||.||||+||+||++||++||+
T Consensus 313 ~-~d~~~~~~W~lAK~~v~~aD~~~HqlisHll~THlv~Ep~~vAt~R~Ls~~HPi~kLL~PH~r~tl~IN~~Ar~~Li~ 391 (667)
T PF00305_consen 313 S-DDGTEDWLWLLAKAHVQVADANYHQLISHLLRTHLVMEPFIVATHRQLSEMHPIYKLLHPHFRYTLAINALARQSLIN 391 (667)
T ss_dssp T-SSSHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHS-TTSHHHHHHGGGGTTHHHHHHHHHHHTSS
T ss_pred C-CCCccchHHHHHHHHHHhhhHHHHHHHhhhhhhhhhhHHHHHHHhcCCCCCCCceeeccceeecchhhhHHHHHHhhc
Confidence 9 455667999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccccCchhHHHHHHHHHHhcccCCCccccchHHHhcCCCCCCCCccccccccccCCccchhhHHHHHHHHHHHHh
Q 002670 602 AGGVIENTFSPGEYCMEMSSVIYDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLDLWGILKQWVTD 681 (894)
Q Consensus 602 ~gGiie~~f~~G~~~~elss~~Y~~~w~F~~~~LP~DL~~RG~~~~D~~~~hgl~l~l~dYpYadDGL~IW~AIk~~V~~ 681 (894)
+||+||++|++|+++|+|++++|++ |+|++++||+||++|||+++|++++||+++.|||||||+|||+||+||++||++
T Consensus 392 ~gG~id~~~~~g~~~~~l~~~~y~~-~~f~~~~lP~dL~~RG~~~~D~~~~~g~~~~l~~YpY~dDgl~iW~aI~~~V~~ 470 (667)
T PF00305_consen 392 AGGIIDKTFSPGKYGMELSSRAYKN-WRFDDQALPADLKKRGMAVDDPSSPHGLRLVLPDYPYRDDGLLIWDAIKKFVSD 470 (667)
T ss_dssp TTSHHHHHSTTTTTHHHHHHHHHTT---GGGGSHHHHHHHTTSEEE-TTSTTSEETTSTT-HHHHHHHHHHHHHHHHHHH
T ss_pred cCcccccccchhhHHHHHHHHHHhh-CCcccccCHHHHHhhcccccccccccccccccccCChhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred hccccccccccccCChHHHHHHHHHHhhcCCCCCCCCCCCCCCChhHHHHHHhHHhhhcccccccccccccccccccCCC
Q 002670 682 YVNHYYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLKTPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFPNR 761 (894)
Q Consensus 682 yv~~YY~~D~~V~~D~ELQaW~~Ei~~~Gh~d~kd~p~~P~l~T~~~Lv~~lT~iIw~aSaqHAAVNfgQy~y~gf~PN~ 761 (894)
||++||++|++|++|.|||+||+||+++||+|+++.+||++|+|+++||++||+|||+||+||||||||||+|+||+||+
T Consensus 471 ~v~~yY~~d~~V~~D~ELQaW~~Ei~~~G~~~~~~~~~~~~i~t~~~Li~~lT~iI~~~S~qHaAVNfgQ~~y~g~~PN~ 550 (667)
T PF00305_consen 471 YVNLYYKSDEAVANDTELQAWWNEIRTVGHGDKKDEGFPPKIKTRDELIDILTTIIFTASAQHAAVNFGQYDYYGFVPNR 550 (667)
T ss_dssp HHHHHSSSHHHHHT-HHHHHHHHHHHHTTTTGGTTGTTSSSSSSHHHHHHHHHHHHHHHTHHHHHHHTTHHHHHSSGGGS
T ss_pred hhhhhcCCcceeCcCHHHHHHHHHHhcccccCcCcCCCCCCCCCHHHHHHHHHHHeeecchhhhhhcccccceeeecCCC
Confidence 99999999999999999999999999999999999888889999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCChhh--HhhhhcCcHHHHHhcCCCHHHHHHHHHHHHhhcCCCCCCccccCCCCCCCCCCHHHHHHHH
Q 002670 762 PTIARVNMPDEDPTEKF--WKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFE 839 (894)
Q Consensus 762 P~~~r~p~P~~kkg~~e--~~~~~~~~e~~~L~tlP~~~qa~~~m~~~~~LS~h~~de~yLG~~~~~~~~~d~~~~~a~~ 839 (894)
|++||+++|.+ ++.+ |++|+.+||+++|++||++.||+.+|+++++||+|++||+|||+|++.+|+.|+++++|++
T Consensus 551 P~~~r~~~P~~--~~~~~~~~~l~~~~e~~~l~~LP~~~~a~~~~~~~~~LS~~~~de~~Lg~~~~~~w~~d~~~~~a~~ 628 (667)
T PF00305_consen 551 PTALRRPMPPP--TTKEVTYEELLKDPEKDFLSTLPSKQQALLQMAVLELLSRHSPDEEYLGQYPEPHWFSDPEAKAAFE 628 (667)
T ss_dssp -S-BSSSS--T--SSSH--HHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHTCB-TT--BTTT-SSTTSSSSHHHHHHHH
T ss_pred ChhhcccCCCC--CcchhhhhhhccChHHHHHHhcCCHHHHHHHHHHHHHhccCCCCcccccCcCcccccccHHHHHHHH
Confidence 99999999987 5555 9999999999999999999999999999999999999999999999889999999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCcccccCCCccCCceeecCC
Q 002670 840 KFSGRLMELEGIIDERNGDSTLVNRNGAGVVPYNLLKPY 878 (894)
Q Consensus 840 ~F~~~L~~Ie~~I~~RN~~~~lknr~g~~~~PY~~L~Ps 878 (894)
+|+++|++||++|++||+++++|||+|||++||+||+||
T Consensus 629 ~F~~~L~~ie~~I~~RN~~~~~~nr~g~~~~PY~~L~Ps 667 (667)
T PF00305_consen 629 RFQEELKEIEEEIDERNKDRKLKNRNGPGKVPYTYLLPS 667 (667)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSSGGGTTTTT----TTSST
T ss_pred HHHHHHHHHHHHHHHHhCCccccccCCCCCCCccccCCC
Confidence 999999999999999999999999999999999999996
No 5
>cd01751 PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase related proteins. Lipoxygenases are nonheme, nonsulfur iron dioxygenases that act on lipid substrates containing one or more (Z,Z)-1,4-pentadiene moieties. In plants, the immediate products are involved in defense mechanisms against pathogens and may be precursors of metabolic regulators. The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.
Probab=100.00 E-value=4.6e-37 Score=298.58 Aligned_cols=130 Identities=43% Similarity=0.730 Sum_probs=118.1
Q ss_pred ccceEEeeecc-eeeeeeEEEeeccccccccccccCceEEEEEEeccccCCCCCcc----eeeccccccCCCCCCcceEE
Q 002670 62 IEAIATSTEKS-VSVINAVVTVKATWKDDYEDYLFGRTLRLELVSAELDHTTGSEK----STIYAHASKAGKDKHGNELY 136 (894)
Q Consensus 62 ~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~~g~~~~l~lvs~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~y 136 (894)
++|+|++|+++ +++ ++.. +.+|++.| ++||+|+|||||+++||+||+|| ++|++|.++. ++++.|
T Consensus 3 vka~V~v~~k~~~~~-~~~~----~~~D~~~~-llGk~v~lqLVSs~~d~~tg~~k~~~~~~l~~~~~~~----~~e~~y 72 (137)
T cd01751 3 VKATVTVMKKNKLDL-NDDG----SGLDDLDD-LLGRSLLLELVSSELDPKTGKGKKGKAAFLEGWGKSL----AGESAY 72 (137)
T ss_pred EEEEEEEEEeecccc-cccc----chhhhHHH-hhCCeEEEEEEEeeecCCCCCcccccceeeecccccC----CcceEE
Confidence 48999999887 666 5532 67899999 99999999999999999999655 8999998654 445699
Q ss_pred EEEEecCCCCCceeEEEEEeCCCCceeEeeEEEecCCCCCcEEEeeccCccCCCCCCCceeeecC
Q 002670 137 EATFNVPSDFGEVGAMSVENEHHVEIYLMNIVLDGFSNGDPVNITCNSWIQPKNKNEPKRIFFTN 201 (894)
Q Consensus 137 ~v~f~~~~~fG~pgai~v~n~~~~e~~l~~i~l~~~p~~~~~~F~cnsWv~~~~~~~~~riff~n 201 (894)
+++|+||++||+||||+|+|+|++||||++|+|+++|++|+|||+|||||||+++|+.+||||+|
T Consensus 73 ~~~F~v~~~fG~pGAi~V~N~h~~EffLksitLe~~p~~g~v~F~CNSWVyp~~~~~~~RiFFsN 137 (137)
T cd01751 73 EAEFEVPASFGPPGAVLVKNEHHSEFFLKSITLEGFGGSGTITFVCNSWVYPKKDYPDKRIFFPN 137 (137)
T ss_pred EEEEEeecccCCccEEEEEECCCceEEEEEEEEeCCCCCccEEEEccccCccCCCCCCCCEEccC
Confidence 99999999999999999999999999999999999998899999999999999999999999997
No 6
>smart00308 LH2 Lipoxygenase homology 2 (beta barrel) domain.
Probab=99.13 E-value=3e-10 Score=105.44 Aligned_cols=83 Identities=37% Similarity=0.684 Sum_probs=64.5
Q ss_pred eEEEEEEeccccCCCCCc-ceeeccccccCCCCCCcceEEEEEEecCCCCCceeEEEEEeCC-CCceeEeeEEEecCCCC
Q 002670 98 TLRLELVSAELDHTTGSE-KSTIYAHASKAGKDKHGNELYEATFNVPSDFGEVGAMSVENEH-HVEIYLMNIVLDGFSNG 175 (894)
Q Consensus 98 ~~~l~lvs~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~~-~~e~~l~~i~l~~~p~~ 175 (894)
+|.|+|++++.+ +|.. ...++.|. ...+ ..|+..|.++.++|++++|.|+|++ +.+|||+.|+|++.+++
T Consensus 20 ~V~l~L~g~~~~--s~~~~~~~~~~~~-----f~~g-~~~~f~v~~~~~lG~l~~v~v~~d~~~~~w~l~~V~V~~~~~~ 91 (105)
T smart00308 20 SVSLSLVGAEGD--GKESKLDYLFKGI-----FARG-STYEFTFDVDEDFGELGAVKIKNEHRHPEWFLKSITVKDLPTG 91 (105)
T ss_pred eEEEEEEeCCCC--CcceeccccCCcc-----ccCC-ceEEEEEecccCCCCcEEEEEEeCCCCCCeEEEEEEEEECCCC
Confidence 599999998754 3321 13344442 2233 3666677799999999999999999 79999999999988777
Q ss_pred CcEEEeeccCccC
Q 002670 176 DPVNITCNSWIQP 188 (894)
Q Consensus 176 ~~~~F~cnsWv~~ 188 (894)
..++|+||+||++
T Consensus 92 ~~~~F~c~~Wl~~ 104 (105)
T smart00308 92 GKYHFPCNSWVYP 104 (105)
T ss_pred CEEEEEcCceeCC
Confidence 8999999999987
No 7
>PF01477 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxygenases (1.13.11.- from EC) are a class of iron-containing dioxygenases which catalyses the hydroperoxidation of lipids, containing a cis,cis-1,4-pentadiene structure. They are common in plants where they may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. In mammals a number of lipoxygenases isozymes are involved in the metabolism of prostaglandins and leukotrienes []. Sequence data is available for the following lipoxygenases: Plant lipoxygenases (1.13.11.12 from EC, IPR001246 from INTERPRO). Plants express a variety of cytosolic isozymes as well as what seems to be a chloroplast isozyme []. Mammalian arachidonate 5-lipoxygenase (1.13.11.34 from EC, IPR001885 from INTERPRO). Mammalian arachidonate 12-lipoxygenase (1.13.11.31 from EC, IPR001885 from INTERPRO). Mammalian erythroid cell-specific 15-lipoxygenase (1.13.11.33 from EC, IPR001885 from INTERPRO). The iron atom in lipoxygenases is bound by four ligands, three of which are histidine residues []. Six histidines are conserved in all lipoxygenase sequences, five of them are found clustered in a stretch of 40 amino acids. This region contains two of the three iron-ligands; the other histidines have been shown [] to be important for the activity of lipoxygenases. This entry represents a domain found in lipoxygenases and other enzymes. It is known as the PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology) domain, is found in a variety of membrane or lipid associated proteins. Structurally, this domain forms a beta-sandwich composed of two sheets of four strands each [, , ]. The most highly conserved regions coincide with the beta-strands, with most of the highly conserved residues being buried within the protein. An exception to this is a surface lysine or arginine that occurs on the surface of the fifth beta-strand of the eukaryotic domains. In pancreatic lipase, the lysine in this position forms a salt bridge with the procolipase protein. The conservation of a charged surface residue may indicate the location of a conserved ligand-binding site. It is thought that this domain may mediate membrane attachment via other protein binding partners.; GO: 0005515 protein binding; PDB: 3FG3_D 3FG1_C 3FG4_D 3DY5_A 2FNQ_B 3O8Y_B 3V99_B 3V92_A 3V98_B 1HPL_A ....
Probab=98.69 E-value=4.3e-08 Score=91.33 Aligned_cols=65 Identities=25% Similarity=0.567 Sum_probs=57.0
Q ss_pred EEEEEEecCCCCCceeEEEEEeC---CCCceeEeeEEEecCCCCCcEEEeeccCccCCCCCCCceeee
Q 002670 135 LYEATFNVPSDFGEVGAMSVENE---HHVEIYLMNIVLDGFSNGDPVNITCNSWIQPKNKNEPKRIFF 199 (894)
Q Consensus 135 ~y~v~f~~~~~fG~pgai~v~n~---~~~e~~l~~i~l~~~p~~~~~~F~cnsWv~~~~~~~~~riff 199 (894)
..+..|..+.++|++.+|.|.++ +...|||++|+|...+.+..+.|+||+||....+++.+|+||
T Consensus 46 ~d~F~i~~~~~lG~i~~i~i~~~~~~~~~~W~l~~V~V~~~~~~~~~~F~~~~Wl~~~~~~~~~rvf~ 113 (113)
T PF01477_consen 46 TDTFTIETPEDLGEIQKIRIWHDGSGPSPSWYLDSVVVTDGETGRTYTFPCNRWLDPDKDYKTERVFF 113 (113)
T ss_dssp EEEEEEEESSCGCSEEEEEEEEESSSSSSEEEEEEEEEEETTTSEEEEEEEEEEESTTEGCSSEEEEE
T ss_pred eEEeeeeecccCCCCcEEEEEEccCCCccceEEEEEEEEeCCCCcEEEEEcCCEECCCCCCCCccEEC
Confidence 34444447889999999999998 778999999999887777889999999999999999999998
No 8
>cd00113 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates.
Probab=98.53 E-value=7.7e-07 Score=84.01 Aligned_cols=65 Identities=11% Similarity=0.186 Sum_probs=55.6
Q ss_pred EEEEEEecCCCCCceeEEEEEeCCCC---ceeEeeEEEecCCCCCcEEEeeccCccCCCCCCCceeee
Q 002670 135 LYEATFNVPSDFGEVGAMSVENEHHV---EIYLMNIVLDGFSNGDPVNITCNSWIQPKNKNEPKRIFF 199 (894)
Q Consensus 135 ~y~v~f~~~~~fG~pgai~v~n~~~~---e~~l~~i~l~~~p~~~~~~F~cnsWv~~~~~~~~~riff 199 (894)
.++..+..+.++|++.+|.|++++.. +|||++|+|.+...+..++|+||+||.....++.+|+|.
T Consensus 49 ~~~f~v~~~~~lG~i~~v~l~~d~~g~~~~W~l~~V~V~~~~~~~~~~F~~~~Wl~~~~~~~~~r~~~ 116 (116)
T cd00113 49 TDTFQIDLKLDIGDITKVYLRRDGSGLSDGWYCESITVQALGTKKVYTFPVNRWVLGGKWYTSVRSLK 116 (116)
T ss_pred ceEEEEeccCCCcCeEEEEEEECCCCCCCCEEEeEEEEEeCCCCCEEEEEeCCCcccCCCCCceeecC
Confidence 34344447889999999999999885 999999999887767789999999999998888888873
No 9
>cd02899 PLAT_SR Scavenger receptor protein. A subfamily of PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates. This subfamily contains Toxoplasma gondii Scavenger protein TgSR1.
Probab=98.01 E-value=2.8e-05 Score=74.06 Aligned_cols=79 Identities=15% Similarity=0.245 Sum_probs=56.7
Q ss_pred eEEEEEEeccccCCCCCcceeeccccccCCCCCCcceEEEEEEecCCCCCceeEEEEEeCCC-CceeEeeEEEecCCCCC
Q 002670 98 TLRLELVSAELDHTTGSEKSTIYAHASKAGKDKHGNELYEATFNVPSDFGEVGAMSVENEHH-VEIYLMNIVLDGFSNGD 176 (894)
Q Consensus 98 ~~~l~lvs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~~~-~e~~l~~i~l~~~p~~~ 176 (894)
+|.|+||-++- .++ +-.|.+ .-....+.+|.|+ ++++|+.-.|.|.|... +.|||+.|+|.+ |++.
T Consensus 20 ~V~i~L~G~~g--~S~--~~~L~~-----~F~~G~~d~F~v~---~~dLG~l~~i~l~n~g~~~~Wf~~~V~V~~-~~g~ 86 (109)
T cd02899 20 TIEITLLGSSG--RSN--PKTLSQ-----GFYPGSLKRIRFR---AADVGDINAIILSNTALNDPWYCDYVRIKS-EDGK 86 (109)
T ss_pred eEEEEEEECCC--CcC--CEEccC-----ccCCCceEEEEEC---ccccCceEEEEEECCCCCCCceeeEEEEEC-CCCC
Confidence 48999996642 222 223332 1112233477665 89999999999998765 679999999986 7777
Q ss_pred cEEEeeccCccCC
Q 002670 177 PVNITCNSWIQPK 189 (894)
Q Consensus 177 ~~~F~cnsWv~~~ 189 (894)
.++||||+|+..-
T Consensus 87 ~~~Fpc~rWla~~ 99 (109)
T cd02899 87 VFAFNVKRWIGYP 99 (109)
T ss_pred EEEEEcceeeCCc
Confidence 8899999999853
No 10
>cd01756 PLAT_repeat PLAT/LH2 domain repeats of family of proteins with unknown function. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=97.65 E-value=0.00056 Score=65.77 Aligned_cols=95 Identities=13% Similarity=0.338 Sum_probs=62.4
Q ss_pred eEEEEEEeccccCCCCCcceeeccccccCCCCCCcceEEEEEEecCCCCCceeEEEEEeCCC---CceeEeeEEEecCCC
Q 002670 98 TLRLELVSAELDHTTGSEKSTIYAHASKAGKDKHGNELYEATFNVPSDFGEVGAMSVENEHH---VEIYLMNIVLDGFSN 174 (894)
Q Consensus 98 ~~~l~lvs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~~~---~e~~l~~i~l~~~p~ 174 (894)
+|.|+|+-+.- . .++-.|..+.....-......+|.++ . .++|++-.|.|..+.. ..|||+.|+|.+...
T Consensus 20 ~V~i~L~G~~g--~--s~~~~L~~~~~~~~FerGs~d~F~i~--~-~~lG~l~~i~i~~d~~g~~~~W~~~~V~V~~~~~ 92 (120)
T cd01756 20 NVFITLYGENG--D--TGKRKLKKSNNKNKFERGQTDKFTVE--A-VDLGKLKKIRIGHDNSGLGAGWFLDKVEIREPGT 92 (120)
T ss_pred EEEEEEEeCCC--c--cccEEccCCCcCCcccCCCeEEEEEE--e-cCCCCeEEEEEEECCCCCCCCcEEeEEEEEECCC
Confidence 48888875421 1 22344554311111112223467666 5 7999999999999776 689999999987666
Q ss_pred CCcEEEeeccCccCCCCC-CCceeee
Q 002670 175 GDPVNITCNSWIQPKNKN-EPKRIFF 199 (894)
Q Consensus 175 ~~~~~F~cnsWv~~~~~~-~~~riff 199 (894)
+...+|+||+|+...+.. .-.|++.
T Consensus 93 ~~~~~F~~~~Wl~~~~~dg~~~r~~~ 118 (120)
T cd01756 93 GDEYTFPCNRWLDKDEDDGQIVRELY 118 (120)
T ss_pred ceEEEEEeCCccCCCCCCCEEEEEEE
Confidence 678999999999986542 2346654
No 11
>cd01753 PLAT_LOX PLAT domain of 12/15-lipoxygenase. As a unique subfamily of the mammalian lipoxygenases, they catalyze enzymatic lipid peroxidation in complex biological structures via direct dioxygenation of phospholipids and cholesterol esters of biomembranes and plasma lipoproteins. Both types of enzymes are cytosolic but need this domain to access their sequestered membrane or micelle bound substrates.
Probab=97.49 E-value=0.00063 Score=65.06 Aligned_cols=83 Identities=20% Similarity=0.353 Sum_probs=56.8
Q ss_pred eEEEEEEeccccCCCCCcceeeccccccCCCCCCcceEEEEEEecCCCCCceeEEEEEeCCC---CceeEeeEEEecCCC
Q 002670 98 TLRLELVSAELDHTTGSEKSTIYAHASKAGKDKHGNELYEATFNVPSDFGEVGAMSVENEHH---VEIYLMNIVLDGFSN 174 (894)
Q Consensus 98 ~~~l~lvs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~~~---~e~~l~~i~l~~~p~ 174 (894)
+|.|+|+-++-+ ++ .-.|..... .-.......|.++ .+.++|++-.|.|.++.. ..|||+.|+|.+..
T Consensus 20 ~V~i~l~G~~g~--S~--~~~L~~~~~--~FerG~~d~F~v~--~~~~lG~l~~i~i~~d~~g~~~~W~l~~V~V~~~~- 90 (113)
T cd01753 20 YIYLTLVGTAGE--SE--KQLLDRPGY--DFERGAVDEYKVK--VPEDLGELLLVRLRKRKYLLFDAWFCNYITVTGPG- 90 (113)
T ss_pred EEEEEEEECCCc--cc--CEEcCCCCC--ccCCCCeeEEEEe--cccCCCCcEEEEEEECCCCCCCCeeecEEEEEcCC-
Confidence 488888865432 22 222332211 1112223467666 788999999999999764 78999999998644
Q ss_pred CCcEEEeeccCccCC
Q 002670 175 GDPVNITCNSWIQPK 189 (894)
Q Consensus 175 ~~~~~F~cnsWv~~~ 189 (894)
+...+||||+|+...
T Consensus 91 ~~~~~F~c~rWl~~~ 105 (113)
T cd01753 91 GDEYHFPCYRWIEGY 105 (113)
T ss_pred CCEEEEEhHHeECCC
Confidence 667899999999875
No 12
>cd01757 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 interacting protein 1 (Rab6IP1)_like family. PLAT/LH2 domains consists of an eight stranded beta-barrel. In RabIP1 this domain may participate in lipid-mediated modulation of Rab6IP1's function via it's generally proposed function of mediating interaction with lipids or membrane bound proteins.
Probab=97.25 E-value=0.00097 Score=64.15 Aligned_cols=49 Identities=8% Similarity=0.348 Sum_probs=43.4
Q ss_pred CCCCCceeEEEEEeCCC---CceeEeeEEEecCCCCCcEEEeeccCccCCCC
Q 002670 143 PSDFGEVGAMSVENEHH---VEIYLMNIVLDGFSNGDPVNITCNSWIQPKNK 191 (894)
Q Consensus 143 ~~~fG~pgai~v~n~~~---~e~~l~~i~l~~~p~~~~~~F~cnsWv~~~~~ 191 (894)
+.++|+.-.|.|..+.. ..|||+.|+|++.+.+..++||||+|+...+.
T Consensus 49 ~~~LG~L~~irIwHDnsG~~~~Wfl~~V~V~d~~t~~~~~FpC~rWLa~~~~ 100 (114)
T cd01757 49 CQNLGKLTTVQIGHDNSGLLAKWLVEYVMVRNEITGHTYKFPCGRWLGEGVD 100 (114)
T ss_pred cCCcCCcEEEEEEECCCCCCCCeeeeEEEEEeCCCCCEEEEecCceecCCCC
Confidence 49999999999998766 78999999999888777899999999997654
No 13
>cd01752 PLAT_polycystin PLAT/LH2 domain of polycystin-1 like proteins. Polycystins are a large family of membrane proteins composed of multiple domains, present in fish, invertebrates, mammals, and humans that are widely expressed in various cell types and whose biological functions remain poorly defined. In human, mutations in polycystin-1 (PKD1) and polycystin-2 (PKD2) have been shown to be the cause for autosomal dominant polycystic kidney disease (ADPKD). The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.
Probab=97.24 E-value=0.0023 Score=61.53 Aligned_cols=86 Identities=17% Similarity=0.355 Sum_probs=57.2
Q ss_pred eEEEEEEeccccCCCCCcceeeccccccCCCCCCc-ceEEEEEEecCCCCCceeEEEEEeCCC---CceeEeeEEEecCC
Q 002670 98 TLRLELVSAELDHTTGSEKSTIYAHASKAGKDKHG-NELYEATFNVPSDFGEVGAMSVENEHH---VEIYLMNIVLDGFS 173 (894)
Q Consensus 98 ~~~l~lvs~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~y~v~f~~~~~fG~pgai~v~n~~~---~e~~l~~i~l~~~p 173 (894)
+|.|+|+.+.-+ + ++-.|..... .....+ ..+|.++ .+.++|++-.|.|..+.. ..|||+.|+|.+..
T Consensus 20 ~V~i~L~G~~g~--s--~~~~L~~~~~--~~F~rG~~~~f~i~--~~~dlG~l~~i~l~hd~~g~~~~W~l~~V~V~~~~ 91 (120)
T cd01752 20 KVTITLYGAEGE--S--EPHHLRDPEK--PIFERGSVDSFLLT--TPFPLGELQSIRLWHDNSGLSPSWYLSRVIVRDLQ 91 (120)
T ss_pred EEEEEEEeCCCC--c--ccEEcCCCCc--cceeCCCeeEEEec--CccCCCCccEEEEEECCCCCCCCeEEEEEEEEECC
Confidence 588888865422 2 1223332211 112222 2345444 678999999999987664 68999999998765
Q ss_pred CCCcEEEeeccCccCCCC
Q 002670 174 NGDPVNITCNSWIQPKNK 191 (894)
Q Consensus 174 ~~~~~~F~cnsWv~~~~~ 191 (894)
.+...+|+||+|+...+.
T Consensus 92 t~~~~~F~~~rWl~~~~~ 109 (120)
T cd01752 92 TGKKWFFLCNDWLSVEEG 109 (120)
T ss_pred CCcEEEEEeCcEECCcCC
Confidence 566789999999997654
No 14
>cd01754 PLAT_plant_stress PLAT/LH2 domain of plant-specific single domain protein family with unknown function. Many of its members are stress induced. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=96.77 E-value=0.0045 Score=60.80 Aligned_cols=56 Identities=7% Similarity=0.109 Sum_probs=45.7
Q ss_pred eEEEEEEecCCCCCceeEEEEEeCCC---CceeEeeEEEecCCCC---CcEEEeeccCccCCCC
Q 002670 134 ELYEATFNVPSDFGEVGAMSVENEHH---VEIYLMNIVLDGFSNG---DPVNITCNSWIQPKNK 191 (894)
Q Consensus 134 ~~y~v~f~~~~~fG~pgai~v~n~~~---~e~~l~~i~l~~~p~~---~~~~F~cnsWv~~~~~ 191 (894)
..|.|+ .+.+.|++-.|.|..... ..|||..|+|.+...+ ...+||||+|+...++
T Consensus 58 d~F~v~--~~~~lG~l~~irI~HDn~G~~p~W~l~~V~V~d~~~~~~~~~~~F~c~rWLa~d~~ 119 (129)
T cd01754 58 DRFSGR--GPCLPSPPCWMNLTSDGTGNHPGWYVNYVEVTQAGQHAPCMQHLFAVEQWLATDES 119 (129)
T ss_pred cEEEEE--eccCCCCeEEEEEEECCCCCCCCcccCEEEEEeCCCCCcCcEEEEEecEeccCCCC
Confidence 478877 788899999999998655 6899999999875432 3799999999987654
No 15
>PF03802 CitX: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; InterPro: IPR005551 Members of this protein family are annotated as CitX, containing the CitX domain, the domain is also found in the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25 from EC), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems.; GO: 0051191 prosthetic group biosynthetic process
Probab=32.67 E-value=41 Score=34.82 Aligned_cols=50 Identities=30% Similarity=0.473 Sum_probs=33.1
Q ss_pred CCCChhhHHHHHHHHHHhhCCCCCcccCCCceeeccccCCCCCCCCCCcccCCCCCCCCcccC
Q 002670 207 SQTPDGLKRFRIEELYHLRGHGQGVRQPSDRIYDYDVYNDLGNPDKRRPVLGGKKFPYPRRCR 269 (894)
Q Consensus 207 ~~tp~~l~~~R~~EL~~lrg~g~g~rk~~dRiYdyd~yndlG~pd~~rpvLgg~~~PyPrr~r 269 (894)
-+.++-..+..--+|++-- ..-|++|.|||+.-|.+- .|--|| +| ||||=
T Consensus 87 v~~~a~~vK~~~i~iEe~h--------plGRL~DiDV~~~~g~~i-SR~~lg---~~-~R~Cl 136 (170)
T PF03802_consen 87 VDGDAEEVKRIMIEIEESH--------PLGRLFDIDVLDPDGKQI-SREDLG---LP-PRRCL 136 (170)
T ss_pred eCCCHHHHHHHHHHHHccC--------cchheEEEeeecCCCCcc-CHHHcC---CC-CCccc
Confidence 3344555666666776654 677999999996555333 566677 43 88885
No 16
>TIGR03124 ctirate_citX holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems.
Probab=29.51 E-value=25 Score=36.37 Aligned_cols=52 Identities=31% Similarity=0.491 Sum_probs=32.0
Q ss_pred CCCCCChhhHHHHHHHHHHhhCCCCCcccCCCceeeccccCCCCCCCCCCcccCCCCCCCCcccC
Q 002670 205 LPSQTPDGLKRFRIEELYHLRGHGQGVRQPSDRIYDYDVYNDLGNPDKRRPVLGGKKFPYPRRCR 269 (894)
Q Consensus 205 LP~~tp~~l~~~R~~EL~~lrg~g~g~rk~~dRiYdyd~yndlG~pd~~rpvLgg~~~PyPrr~r 269 (894)
+--+.|+.-.|..-=+|++-. .--|++|.|||+.-|.+- .|--|| +| ||||=
T Consensus 83 ~~v~~~a~~vK~~~i~iEe~h--------plGRL~DlDV~~~~g~~i-SR~~lg---~~-~R~Cl 134 (165)
T TIGR03124 83 LVVDAPALELKRLMIKLEESH--------PLGRLWDIDVLDADGKSL-SRTDLG---LP-PRKCL 134 (165)
T ss_pred EEeCCCHHHHHHHHHHHHhCC--------chhhheeheeecCCCCCc-CHHHcC---CC-CCeee
Confidence 334445545555556666544 455899999997555332 455566 55 88885
No 17
>PF07157 DNA_circ_N: DNA circularisation protein N-terminus; InterPro: IPR009826 This entry represents the N terminus (approximately 100 residues) of a number of phage DNA circulation proteins.
Probab=28.90 E-value=16 Score=34.43 Aligned_cols=69 Identities=23% Similarity=0.625 Sum_probs=44.5
Q ss_pred cCCC--CCCCCccccccccccCCccchhhHHHHHHHHHHHHhh--------ccccccccccccCChHHHHHHHHHHhhcC
Q 002670 642 RGMA--VEDPNARHGLKLTIDDYPFAKDGLDLWGILKQWVTDY--------VNHYYPDQSLVESDDELQAWWTEIRTVGH 711 (894)
Q Consensus 642 RG~~--~~D~~~~hgl~l~l~dYpYadDGL~IW~AIk~~V~~y--------v~~YY~~D~~V~~D~ELQaW~~Ei~~~Gh 711 (894)
|||. +.+.+...|=++....|||+|.+ ||+|. |+.|+-.|+. +..++++.+-+.+.|-
T Consensus 11 RGVpF~v~~~~~~~gRr~~~heyP~rd~~---------~vEDlG~~~r~~~~~a~~~G~dy---~~~~~~L~~al~~~G~ 78 (93)
T PF07157_consen 11 RGVPFDVESTDDSGGRRLAVHEYPYRDGP---------WVEDLGRKARRIRVTAFFVGDDY---EAQRDALIAALEAPGP 78 (93)
T ss_pred CCeeEEEEEcccCCCcEEEEEecCCCCCc---------CeeecCCCCcEEEEEEEEECCcH---HHHHHHHHHHHcCCCC
Confidence 5554 44444556667889999999886 55654 3333333321 3467788888888888
Q ss_pred CCCCCCCCCCCC
Q 002670 712 ADKKDEPWWPVL 723 (894)
Q Consensus 712 ~d~kd~p~~P~l 723 (894)
|..-. |||..+
T Consensus 79 G~LvH-P~~G~~ 89 (93)
T PF07157_consen 79 GELVH-PWFGSM 89 (93)
T ss_pred eEEec-CCCceE
Confidence 87665 777654
No 18
>PF10281 Ish1: Putative stress-responsive nuclear envelope protein; InterPro: IPR018803 This group of proteins, found primarily in fungi, consists of putative stress-responsive nuclear envelope protein Ish1 and homologues [].
Probab=27.08 E-value=93 Score=24.22 Aligned_cols=31 Identities=26% Similarity=0.471 Sum_probs=20.9
Q ss_pred CChHHHHHHHHHHhhcCCCCCCCCCCCCCCChhHHHHHHh
Q 002670 695 SDDELQAWWTEIRTVGHADKKDEPWWPVLKTPQNLIEILT 734 (894)
Q Consensus 695 ~D~ELQaW~~Ei~~~Gh~d~kd~p~~P~l~T~~~Lv~~lT 734 (894)
.|.+|+.|..+ ||-... +...|+++|++.+-
T Consensus 5 s~~~L~~wL~~-----~gi~~~----~~~~~rd~Ll~~~k 35 (38)
T PF10281_consen 5 SDSDLKSWLKS-----HGIPVP----KSAKTRDELLKLAK 35 (38)
T ss_pred CHHHHHHHHHH-----cCCCCC----CCCCCHHHHHHHHH
Confidence 46789999987 432222 12369999998763
No 19
>PF10474 DUF2451: Protein of unknown function C-terminus (DUF2451); InterPro: IPR019514 This protein is found in eukaryotes but its function is not known. The N-terminal domain of some members is PF10475 from PFAM (DUF2450).
Probab=24.75 E-value=43 Score=36.33 Aligned_cols=24 Identities=29% Similarity=0.908 Sum_probs=20.1
Q ss_pred HHHHHhhccccccccccccCChHHHHHHHH
Q 002670 676 KQWVTDYVNHYYPDQSLVESDDELQAWWTE 705 (894)
Q Consensus 676 k~~V~~yv~~YY~~D~~V~~D~ELQaW~~E 705 (894)
.+||..||+.||= .+.|+..|+++
T Consensus 178 ~~~Ve~YIKAyYl------~e~e~~~W~~~ 201 (234)
T PF10474_consen 178 REYVENYIKAYYL------PEEELEEWIRT 201 (234)
T ss_pred HHHHHHHHHHHcC------CHHHHHHHHHh
Confidence 5799999999993 34589999986
No 20
>PRK01392 citX 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA:apo-citrate lyase; Reviewed
Probab=22.39 E-value=40 Score=35.31 Aligned_cols=54 Identities=35% Similarity=0.635 Sum_probs=31.3
Q ss_pred cCCCCCChhhHHHHHHHHHHhhCCCCCcccCCCceeeccccCCCCC-CCC-CCcccCCCCCCCCcccC
Q 002670 204 YLPSQTPDGLKRFRIEELYHLRGHGQGVRQPSDRIYDYDVYNDLGN-PDK-RRPVLGGKKFPYPRRCR 269 (894)
Q Consensus 204 yLP~~tp~~l~~~R~~EL~~lrg~g~g~rk~~dRiYdyd~yndlG~-pd~-~rpvLgg~~~PyPrr~r 269 (894)
|+--+.++.-.|..-=+|++-. .--|++|.|||+--|. +-. .|--|| +| ||||=
T Consensus 88 ~~~v~~~a~~vK~~~i~iEe~h--------plGRL~DiDV~~~~~~~~~~iSR~~lg---~p-~R~Cl 143 (180)
T PRK01392 88 YLAIALPARDLKLAMIALEQSH--------PLGRLWDLDVLTLEGEIPHQLSRTDLG---LP-PRRCL 143 (180)
T ss_pred EEEeCCCHHHHHHHHHHHHhcC--------cchhheeeeeeccCCCCcCccCHHHcC---CC-CCeee
Confidence 3334455555566666666654 4558999999952221 112 454555 44 88875
No 21
>PF12588 PSDC: Phophatidylserine decarboxylase ; InterPro: IPR022237 This domain family is found in bacteria and eukaryotes, and is approximately 140 amino acids in length. The family is found in association with PF02666 from PFAM. Phosphatidylserine decarboxylase (PSD) is an important enzyme in the synthesis of phosphatidylethanolamine in both prokaryotes and eukaryotes.
Probab=21.14 E-value=1.6e+02 Score=29.87 Aligned_cols=126 Identities=17% Similarity=0.216 Sum_probs=69.8
Q ss_pred cccCChHHHHHHHHHHhhcCCCCCCCCCCC-CCCChhHHHHHHhHHhhhcccccccccccccccccccCCCccccCCCCC
Q 002670 692 LVESDDELQAWWTEIRTVGHADKKDEPWWP-VLKTPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFPNRPTIARVNMP 770 (894)
Q Consensus 692 ~V~~D~ELQaW~~Ei~~~Gh~d~kd~p~~P-~l~T~~~Lv~~lT~iIw~aSaqHAAVNfgQy~y~gf~PN~P~~~r~p~P 770 (894)
-|.+|++|-.+.+++.++ .....+..|.| .+++.++|..++-.||-+|=.... .-.+-..-|+.=|. .+--||-
T Consensus 11 lIe~dp~l~ml~~~Mf~q-~~~~~~p~g~~~~i~~~~~mL~~ln~i~t~AP~~~~--~~~~~glvG~P~na--iLdwpM~ 85 (141)
T PF12588_consen 11 LIESDPRLYMLFTQMFDQ-PPYNADPTGNPPQIRDYDEMLQLLNHIMTTAPEFSD--ANEPVGLVGFPMNA--ILDWPMG 85 (141)
T ss_pred HHhcCHHHHHHHHHHHhC-cccccCCCCCccccccHHHHHHHHHHHHhhCCcccc--cCCCCCccccChHH--HHHhhcc
Confidence 468899999999999987 32233445677 899999999999999965433222 00112233333332 2333454
Q ss_pred CCCCChhhHhhhhcCcHHHHHhcCCCHHHHHHHHHH--HHhhcCCCCCCccccCCCCCCCCCCHHHHHHH
Q 002670 771 DEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIAT--LDLLSTHSPDEEFLGKGKEPAWGEDPVINAAF 838 (894)
Q Consensus 771 ~~kkg~~e~~~~~~~~e~~~L~tlP~~~qa~~~m~~--~~~LS~h~~de~yLG~~~~~~~~~d~~~~~a~ 838 (894)
|+ ..|.-|+. |...+.+..|.- ...|++..+- ..|...+...|++. .+++.+
T Consensus 86 T~----sG~a~F~~----------p~vN~~lK~ILn~W~~fL~sp~S~-~vL~~~~~~GWfs~-~A~~~l 139 (141)
T PF12588_consen 86 TP----SGYAFFLD----------PDVNAQLKKILNEWGEFLSSPASR-SVLNTDPPNGWFSP-EALKEL 139 (141)
T ss_pred Ch----HHHHHHcC----------HHHHHHHHHHHHHHHHHcCChhhh-ccccCCCCCCccCH-HHHHHh
Confidence 44 23433321 223334443332 2457655443 34665533479994 444443
Done!