Query 002671
Match_columns 894
No_of_seqs 322 out of 2168
Neff 8.6
Searched_HMMs 46136
Date Fri Mar 29 04:45:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002671.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002671hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0206 P-type ATPase [General 100.0 3E-159 7E-164 1410.8 60.5 813 33-894 11-827 (1151)
2 PLN03190 aminophospholipid tra 100.0 8E-145 2E-149 1337.1 82.3 816 35-894 69-904 (1178)
3 TIGR01652 ATPase-Plipid phosph 100.0 2E-136 4E-141 1278.6 82.1 797 54-894 1-801 (1057)
4 KOG0210 P-type ATPase [Inorgan 100.0 4E-126 8E-131 1029.8 51.8 745 36-894 63-814 (1051)
5 COG0474 MgtA Cation transport 100.0 3.7E-98 8E-103 913.7 47.2 606 47-894 50-670 (917)
6 TIGR01657 P-ATPase-V P-type AT 100.0 2E-89 4.3E-94 853.1 61.4 663 48-894 146-834 (1054)
7 TIGR01523 ATPase-IID_K-Na pota 100.0 5.4E-90 1.2E-94 849.3 53.7 680 46-891 31-777 (1053)
8 KOG0202 Ca2+ transporting ATPa 100.0 3.3E-91 7.3E-96 779.4 37.2 653 46-887 28-703 (972)
9 TIGR01106 ATPase-IIC_X-K sodiu 100.0 1.1E-89 2.4E-94 849.7 51.4 643 46-892 41-716 (997)
10 TIGR01517 ATPase-IIB_Ca plasma 100.0 1.4E-88 3.1E-93 838.1 49.2 608 46-891 65-700 (941)
11 KOG0204 Calcium transporting A 100.0 1.3E-88 2.7E-93 757.3 38.6 621 47-892 125-771 (1034)
12 TIGR01116 ATPase-IIA1_Ca sarco 100.0 9.9E-87 2.1E-91 818.5 54.5 632 74-891 1-661 (917)
13 PRK10517 magnesium-transportin 100.0 5.5E-84 1.2E-88 786.5 50.4 571 46-887 72-663 (902)
14 TIGR01522 ATPase-IIA2_Ca golgi 100.0 1.5E-83 3.2E-88 788.9 54.4 601 46-893 29-648 (884)
15 PRK15122 magnesium-transportin 100.0 2.9E-83 6.4E-88 781.5 47.9 586 46-887 50-663 (903)
16 TIGR01524 ATPase-IIIB_Mg magne 100.0 5.1E-83 1.1E-87 779.1 49.8 570 46-887 38-628 (867)
17 TIGR01647 ATPase-IIIA_H plasma 100.0 3.4E-82 7.3E-87 762.6 50.4 547 47-887 7-560 (755)
18 KOG0208 Cation transport ATPas 100.0 2.5E-81 5.5E-86 708.3 46.8 690 48-894 167-885 (1140)
19 PRK01122 potassium-transportin 100.0 6.2E-72 1.3E-76 651.3 48.8 491 75-893 28-537 (679)
20 PRK14010 potassium-transportin 100.0 2E-70 4.4E-75 638.0 48.2 487 76-893 28-533 (673)
21 KOG0203 Na+/K+ ATPase, alpha s 100.0 4.2E-72 9.2E-77 624.4 22.1 642 48-892 65-738 (1019)
22 TIGR01497 kdpB K+-transporting 100.0 1.6E-68 3.4E-73 621.1 49.3 489 75-887 27-534 (675)
23 KOG0209 P-type ATPase [Inorgan 100.0 8.4E-71 1.8E-75 609.1 27.1 641 52-887 174-832 (1160)
24 TIGR01494 ATPase_P-type ATPase 100.0 8.7E-63 1.9E-67 574.2 45.0 425 106-887 4-432 (499)
25 COG2217 ZntA Cation transport 100.0 1.5E-61 3.2E-66 563.6 42.7 441 109-888 177-626 (713)
26 KOG0205 Plasma membrane H+-tra 100.0 1.1E-61 2.3E-66 525.2 22.0 558 47-889 42-612 (942)
27 PRK11033 zntA zinc/cadmium/mer 100.0 5.4E-58 1.2E-62 550.8 47.0 433 111-887 211-654 (741)
28 KOG0207 Cation transport ATPas 100.0 6.6E-58 1.4E-62 519.5 32.9 455 113-888 348-812 (951)
29 TIGR01525 ATPase-IB_hvy heavy 100.0 2.1E-56 4.5E-61 525.3 43.1 438 113-887 25-473 (556)
30 TIGR01511 ATPase-IB1_Cu copper 100.0 6.5E-56 1.4E-60 519.2 39.1 426 110-887 58-492 (562)
31 TIGR01512 ATPase-IB2_Cd heavy 100.0 1.1E-54 2.4E-59 507.2 42.1 437 86-887 5-451 (536)
32 PRK10671 copA copper exporting 100.0 7.5E-54 1.6E-58 525.6 43.9 439 110-888 290-739 (834)
33 COG2216 KdpB High-affinity K+ 100.0 2.9E-51 6.3E-56 435.5 30.4 464 107-894 70-540 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 9.5E-31 2E-35 274.8 22.4 222 109-411 2-230 (230)
35 PF00702 Hydrolase: haloacid d 99.9 8.6E-22 1.9E-26 204.5 14.7 97 706-881 115-215 (215)
36 PF13246 Hydrolase_like2: Puta 99.5 1.9E-14 4.1E-19 126.4 6.0 90 531-638 1-90 (91)
37 COG4087 Soluble P-type ATPase 99.4 9.3E-13 2E-17 117.3 10.2 106 707-892 19-124 (152)
38 TIGR02137 HSK-PSP phosphoserin 98.8 3.1E-08 6.7E-13 101.2 10.6 109 718-893 68-176 (203)
39 COG0560 SerB Phosphoserine pho 98.8 4.5E-08 9.7E-13 100.5 11.8 110 717-890 76-189 (212)
40 PRK10513 sugar phosphate phosp 98.7 2.6E-08 5.7E-13 107.2 7.1 42 718-759 20-61 (270)
41 PRK15126 thiamin pyrimidine py 98.7 4.6E-08 1E-12 105.4 8.5 49 841-889 179-232 (272)
42 COG0561 Cof Predicted hydrolas 98.6 6.7E-08 1.4E-12 103.7 8.4 49 711-759 12-61 (264)
43 PF08282 Hydrolase_3: haloacid 98.6 7.8E-08 1.7E-12 102.0 7.2 173 717-889 14-230 (254)
44 TIGR01482 SPP-subfamily Sucros 98.5 3.2E-07 7E-12 95.8 10.5 166 718-889 15-193 (225)
45 PRK10976 putative hydrolase; P 98.5 8.9E-08 1.9E-12 102.9 6.4 49 841-889 181-234 (266)
46 PRK03669 mannosyl-3-phosphogly 98.5 2.3E-06 5E-11 92.1 16.3 39 719-757 25-63 (271)
47 PLN02887 hydrolase family prot 98.5 2E-07 4.3E-12 108.9 7.8 41 718-758 325-365 (580)
48 PRK11133 serB phosphoserine ph 98.5 5.8E-07 1.2E-11 98.2 10.7 109 718-889 181-292 (322)
49 PRK01158 phosphoglycolate phos 98.5 7E-07 1.5E-11 93.7 10.5 164 716-889 17-201 (230)
50 PRK10530 pyridoxal phosphate ( 98.4 9.9E-07 2.1E-11 95.1 9.7 41 718-758 20-60 (272)
51 TIGR01486 HAD-SF-IIB-MPGP mann 98.4 4.5E-06 9.8E-11 89.1 14.0 40 719-758 17-56 (256)
52 TIGR01487 SPP-like sucrose-pho 98.4 2.4E-06 5.2E-11 88.6 11.3 161 718-889 18-191 (215)
53 KOG1615 Phosphoserine phosphat 98.3 1.1E-06 2.3E-11 84.7 7.1 110 718-888 88-200 (227)
54 TIGR02461 osmo_MPG_phos mannos 98.3 4.9E-06 1.1E-10 86.7 11.7 43 716-758 13-55 (225)
55 PF12710 HAD: haloacid dehalog 98.3 3.4E-06 7.3E-11 85.6 10.0 93 721-878 92-192 (192)
56 TIGR00099 Cof-subfamily Cof su 98.3 2.4E-06 5.3E-11 91.2 8.5 41 718-758 16-56 (256)
57 TIGR01670 YrbI-phosphatas 3-de 98.2 8.1E-06 1.8E-10 79.7 9.1 33 726-758 36-68 (154)
58 TIGR01485 SPP_plant-cyano sucr 98.1 2.2E-05 4.7E-10 83.5 13.0 172 716-889 19-212 (249)
59 PRK14502 bifunctional mannosyl 98.1 2.6E-05 5.5E-10 91.1 14.2 39 719-757 434-472 (694)
60 TIGR00338 serB phosphoserine p 98.1 1.2E-05 2.6E-10 83.6 10.6 109 718-890 85-197 (219)
61 PRK13582 thrH phosphoserine ph 98.1 2.4E-05 5.2E-10 80.4 11.7 106 718-890 68-173 (205)
62 PRK00192 mannosyl-3-phosphogly 98.1 3.6E-05 7.9E-10 82.9 13.5 42 717-758 20-61 (273)
63 TIGR02463 MPGP_rel mannosyl-3- 98.1 4.6E-05 9.9E-10 79.4 13.3 38 721-758 19-56 (221)
64 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.0 2.7E-05 5.9E-10 79.7 10.9 108 718-888 80-190 (201)
65 TIGR03333 salvage_mtnX 2-hydro 98.0 3.5E-05 7.5E-10 79.9 11.5 112 717-885 69-180 (214)
66 TIGR02471 sucr_syn_bact_C sucr 98.0 3.9E-05 8.4E-10 80.8 12.0 47 843-889 152-203 (236)
67 TIGR02726 phenyl_P_delta pheny 98.0 1.7E-05 3.7E-10 78.2 8.1 34 725-758 41-74 (169)
68 PTZ00174 phosphomannomutase; P 98.0 1.7E-05 3.7E-10 84.1 8.2 49 841-890 179-234 (247)
69 PRK12702 mannosyl-3-phosphogly 98.0 3.3E-05 7.2E-10 81.4 10.1 41 718-758 18-58 (302)
70 TIGR01484 HAD-SF-IIB HAD-super 98.0 3.7E-05 8.1E-10 79.0 10.5 167 718-886 17-204 (204)
71 TIGR01490 HAD-SF-IB-hyp1 HAD-s 97.9 5.5E-05 1.2E-09 77.5 10.0 112 716-889 85-199 (202)
72 TIGR01488 HAD-SF-IB Haloacid D 97.9 6.1E-05 1.3E-09 75.3 9.6 40 719-758 74-113 (177)
73 PRK09484 3-deoxy-D-manno-octul 97.9 4.6E-05 1E-09 76.7 8.5 34 725-758 55-88 (183)
74 TIGR01489 DKMTPPase-SF 2,3-dik 97.8 5.8E-05 1.3E-09 76.3 9.0 114 717-885 71-186 (188)
75 PRK10187 trehalose-6-phosphate 97.8 0.00016 3.5E-09 77.4 12.5 168 718-889 36-222 (266)
76 cd01427 HAD_like Haloacid deha 97.8 7.8E-05 1.7E-09 70.4 8.7 44 715-758 21-64 (139)
77 PLN02382 probable sucrose-phos 97.8 0.00026 5.7E-09 80.4 14.3 164 724-889 34-223 (413)
78 PRK09552 mtnX 2-hydroxy-3-keto 97.8 0.00015 3.3E-09 75.3 11.4 110 718-885 74-184 (219)
79 PLN02954 phosphoserine phospha 97.7 0.00017 3.6E-09 75.3 10.1 41 718-758 84-124 (224)
80 PRK14501 putative bifunctional 97.4 0.0016 3.5E-08 80.0 14.4 170 719-889 515-702 (726)
81 PRK13222 phosphoglycolate phos 97.1 0.0022 4.8E-08 66.8 10.1 42 717-758 92-133 (226)
82 TIGR01545 YfhB_g-proteo haloac 97.1 0.0039 8.3E-08 64.2 11.2 110 718-890 94-204 (210)
83 COG0546 Gph Predicted phosphat 97.1 0.0028 6.2E-08 65.9 10.0 44 716-759 87-130 (220)
84 COG1778 Low specificity phosph 97.0 0.0013 2.8E-08 61.9 5.9 34 725-758 42-75 (170)
85 TIGR01449 PGP_bact 2-phosphogl 97.0 0.0024 5.3E-08 65.8 8.5 41 718-758 85-125 (213)
86 PRK11590 hypothetical protein; 97.0 0.0062 1.3E-07 62.9 11.2 111 718-891 95-206 (211)
87 TIGR01454 AHBA_synth_RP 3-amin 96.9 0.0036 7.9E-08 64.2 9.1 41 718-758 75-115 (205)
88 TIGR01544 HAD-SF-IE haloacid d 96.9 0.0057 1.2E-07 64.9 10.6 44 718-761 121-164 (277)
89 PLN02423 phosphomannomutase 96.9 0.0038 8.3E-08 66.0 9.4 49 840-890 179-234 (245)
90 PF05116 S6PP: Sucrose-6F-phos 96.9 0.0037 8.1E-08 66.1 9.1 159 730-890 31-210 (247)
91 PRK08238 hypothetical protein; 96.9 0.005 1.1E-07 71.1 10.6 97 718-890 72-168 (479)
92 PLN02580 trehalose-phosphatase 96.6 0.049 1.1E-06 60.6 15.6 48 841-888 291-352 (384)
93 smart00831 Cation_ATPase_N Cat 96.6 0.0014 3.1E-08 53.4 2.4 46 47-95 16-61 (64)
94 PRK10826 2-deoxyglucose-6-phos 96.5 0.0081 1.7E-07 62.5 8.3 43 717-759 91-133 (222)
95 PF00690 Cation_ATPase_N: Cati 96.5 0.00068 1.5E-08 56.2 0.0 45 46-93 25-69 (69)
96 PRK13225 phosphoglycolate phos 96.5 0.012 2.7E-07 63.1 9.5 41 718-758 142-182 (273)
97 PRK13288 pyrophosphatase PpaX; 96.4 0.0098 2.1E-07 61.5 8.4 41 718-758 82-122 (214)
98 PRK13223 phosphoglycolate phos 96.4 0.015 3.2E-07 62.6 9.9 41 717-757 100-140 (272)
99 TIGR00685 T6PP trehalose-phosp 96.3 0.029 6.3E-07 59.3 11.1 46 842-887 161-217 (244)
100 TIGR01548 HAD-SF-IA-hyp1 haloa 96.3 0.02 4.4E-07 58.3 9.6 43 716-758 104-146 (197)
101 PLN02205 alpha,alpha-trehalose 96.3 0.13 2.9E-06 63.7 18.1 164 718-881 616-801 (854)
102 TIGR01672 AphA HAD superfamily 96.3 0.011 2.5E-07 61.6 7.6 40 719-758 115-158 (237)
103 PRK11009 aphA acid phosphatase 96.2 0.017 3.7E-07 60.2 8.3 40 718-757 114-157 (237)
104 PRK13226 phosphoglycolate phos 96.1 0.023 5E-07 59.4 9.0 41 718-758 95-135 (229)
105 TIGR01428 HAD_type_II 2-haloal 96.0 0.038 8.2E-07 56.3 10.0 41 718-758 92-132 (198)
106 smart00775 LNS2 LNS2 domain. T 96.0 0.047 1E-06 53.3 10.0 34 716-749 25-58 (157)
107 TIGR01662 HAD-SF-IIIA HAD-supe 95.9 0.032 6.9E-07 52.7 8.2 41 717-757 24-72 (132)
108 PRK14988 GMP/IMP nucleotidase; 95.7 0.054 1.2E-06 56.4 9.8 41 718-758 93-133 (224)
109 TIGR01422 phosphonatase phosph 95.6 0.052 1.1E-06 57.7 9.3 42 718-759 99-140 (253)
110 PHA02530 pseT polynucleotide k 95.5 0.035 7.6E-07 60.7 7.9 44 715-758 184-227 (300)
111 PRK13478 phosphonoacetaldehyde 95.5 0.066 1.4E-06 57.4 9.8 41 718-758 101-141 (267)
112 TIGR03351 PhnX-like phosphonat 95.4 0.057 1.2E-06 55.9 8.8 42 717-758 86-127 (220)
113 PF13419 HAD_2: Haloacid dehal 95.4 0.066 1.4E-06 52.7 8.9 44 716-759 75-118 (176)
114 COG4359 Uncharacterized conser 95.2 0.068 1.5E-06 51.8 7.4 38 847-885 146-183 (220)
115 PLN03017 trehalose-phosphatase 95.2 0.62 1.3E-05 51.6 16.0 207 671-887 83-333 (366)
116 PLN02770 haloacid dehalogenase 95.2 0.078 1.7E-06 56.2 8.9 42 718-759 108-149 (248)
117 PRK06769 hypothetical protein; 95.2 0.099 2.2E-06 52.0 9.1 27 719-745 29-55 (173)
118 TIGR01685 MDP-1 magnesium-depe 95.1 0.12 2.7E-06 51.2 9.2 50 709-758 36-86 (174)
119 TIGR02253 CTE7 HAD superfamily 95.0 0.1 2.2E-06 54.1 9.0 41 718-758 94-134 (221)
120 PRK11587 putative phosphatase; 94.8 0.15 3.2E-06 52.8 9.5 40 718-757 83-122 (218)
121 TIGR01990 bPGM beta-phosphoglu 94.7 0.082 1.8E-06 53.0 7.2 39 718-758 87-125 (185)
122 PLN02779 haloacid dehalogenase 94.7 0.16 3.4E-06 55.1 9.8 38 718-755 144-181 (286)
123 PLN03243 haloacid dehalogenase 94.7 0.12 2.5E-06 55.2 8.5 42 718-759 109-150 (260)
124 TIGR01509 HAD-SF-IA-v3 haloaci 94.7 0.16 3.4E-06 50.7 9.1 40 718-758 85-124 (183)
125 PRK06698 bifunctional 5'-methy 94.6 0.18 4E-06 58.6 10.6 42 718-759 330-371 (459)
126 TIGR02009 PGMB-YQAB-SF beta-ph 94.6 0.092 2E-06 52.6 7.2 40 717-758 87-126 (185)
127 TIGR01656 Histidinol-ppas hist 94.5 0.13 2.8E-06 49.7 7.7 27 718-744 27-53 (147)
128 COG3769 Predicted hydrolase (H 94.3 0.6 1.3E-05 46.9 11.5 37 722-758 27-63 (274)
129 TIGR01668 YqeG_hyp_ppase HAD s 94.0 0.18 4E-06 50.0 7.7 40 718-757 43-83 (170)
130 PLN02811 hydrolase 93.9 0.19 4E-06 52.2 8.0 31 718-748 78-108 (220)
131 PLN02575 haloacid dehalogenase 93.8 0.25 5.4E-06 55.1 9.0 42 718-759 216-257 (381)
132 PRK08942 D,D-heptose 1,7-bisph 93.7 0.25 5.3E-06 49.6 8.3 27 718-744 29-55 (181)
133 TIGR01549 HAD-SF-IA-v1 haloaci 93.6 0.3 6.6E-06 47.3 8.4 40 716-755 62-101 (154)
134 TIGR01533 lipo_e_P4 5'-nucleot 93.6 0.41 9E-06 50.8 9.8 42 717-758 117-161 (266)
135 PRK09449 dUMP phosphatase; Pro 93.5 0.46 1E-05 49.3 10.1 40 718-758 95-134 (224)
136 smart00577 CPDc catalytic doma 93.5 0.11 2.4E-06 50.2 5.0 43 715-758 42-84 (148)
137 PRK05446 imidazole glycerol-ph 93.2 0.35 7.6E-06 53.6 9.0 25 718-742 30-54 (354)
138 PLN02940 riboflavin kinase 93.0 0.29 6.3E-06 55.3 8.2 40 718-757 93-133 (382)
139 TIGR01681 HAD-SF-IIIC HAD-supe 92.9 0.29 6.3E-06 46.0 6.7 39 718-756 29-68 (128)
140 TIGR02252 DREG-2 REG-2-like, H 92.8 0.43 9.3E-06 48.7 8.5 39 718-757 105-143 (203)
141 TIGR01261 hisB_Nterm histidino 92.5 0.59 1.3E-05 45.8 8.6 26 718-743 29-54 (161)
142 PF13344 Hydrolase_6: Haloacid 92.5 0.38 8.2E-06 43.1 6.7 48 711-758 7-57 (101)
143 TIGR00213 GmhB_yaeD D,D-heptos 91.7 1.4 3E-05 43.9 10.4 27 719-745 27-53 (176)
144 TIGR01664 DNA-3'-Pase DNA 3'-p 91.3 0.69 1.5E-05 45.6 7.6 27 719-745 43-69 (166)
145 TIGR01691 enolase-ppase 2,3-di 91.2 1.5 3.2E-05 45.5 10.1 40 715-754 92-131 (220)
146 TIGR01675 plant-AP plant acid 91.2 1.1 2.3E-05 46.5 9.0 30 718-747 120-149 (229)
147 PF06888 Put_Phosphatase: Puta 90.7 0.96 2.1E-05 47.1 8.2 42 718-759 71-114 (234)
148 TIGR02254 YjjG/YfnB HAD superf 90.6 0.95 2E-05 46.8 8.4 41 718-759 97-137 (224)
149 KOG4383 Uncharacterized conser 90.4 2.7 5.9E-05 48.7 11.8 188 702-890 810-1022(1354)
150 TIGR01686 FkbH FkbH-like domai 90.3 0.81 1.7E-05 50.5 7.8 37 718-754 31-67 (320)
151 PLN02151 trehalose-phosphatase 90.2 7.5 0.00016 43.1 15.0 73 672-753 71-154 (354)
152 TIGR02247 HAD-1A3-hyp Epoxide 90.0 0.69 1.5E-05 47.5 6.6 29 718-746 94-122 (211)
153 PRK09456 ?-D-glucose-1-phospha 89.9 1.3 2.7E-05 45.1 8.3 30 718-747 84-113 (199)
154 COG4030 Uncharacterized protei 89.9 1 2.3E-05 45.3 7.2 44 847-890 190-239 (315)
155 PLN02645 phosphoglycolate phos 89.6 1.3 2.9E-05 48.5 8.7 47 711-757 37-86 (311)
156 TIGR01459 HAD-SF-IIA-hyp4 HAD- 88.7 1.8 3.9E-05 45.6 8.7 48 711-758 17-66 (242)
157 PHA02597 30.2 hypothetical pro 88.5 2.3 5E-05 43.0 9.1 39 718-757 74-112 (197)
158 PLN02919 haloacid dehalogenase 86.2 2.2 4.8E-05 54.7 8.9 41 718-758 161-201 (1057)
159 COG2179 Predicted hydrolase of 85.8 5.1 0.00011 38.9 8.8 40 719-758 47-86 (175)
160 COG0241 HisB Histidinol phosph 84.7 5.4 0.00012 39.7 8.9 47 837-883 88-144 (181)
161 PF02358 Trehalose_PPase: Treh 83.8 4.9 0.00011 42.0 8.9 165 718-882 19-205 (235)
162 PRK10563 6-phosphogluconate ph 83.6 2.6 5.6E-05 43.5 6.6 38 718-758 88-125 (221)
163 PF08235 LNS2: LNS2 (Lipin/Ned 83.3 7.4 0.00016 37.8 8.9 34 717-750 26-59 (157)
164 KOG3120 Predicted haloacid deh 82.8 5.8 0.00012 40.2 8.1 41 718-758 84-125 (256)
165 PF03767 Acid_phosphat_B: HAD 81.6 3.9 8.5E-05 42.6 7.0 29 718-746 115-143 (229)
166 TIGR01993 Pyr-5-nucltdase pyri 80.8 5.8 0.00013 39.6 7.8 38 718-758 84-121 (184)
167 TIGR01457 HAD-SF-IIA-hyp2 HAD- 79.6 3.8 8.2E-05 43.4 6.2 50 711-760 10-62 (249)
168 TIGR01458 HAD-SF-IIA-hyp3 HAD- 79.0 3 6.5E-05 44.4 5.2 48 711-758 10-64 (257)
169 PRK10444 UMP phosphatase; Prov 78.2 2.3 4.9E-05 45.0 4.0 45 711-755 10-54 (248)
170 PF09419 PGP_phosphatase: Mito 77.5 9.3 0.0002 37.6 7.6 43 715-757 56-107 (168)
171 TIGR01684 viral_ppase viral ph 76.9 3.6 7.7E-05 44.0 4.9 41 719-759 146-187 (301)
172 TIGR01657 P-ATPase-V P-type AT 74.6 64 0.0014 41.8 16.3 21 145-165 249-271 (1054)
173 TIGR01517 ATPase-IIB_Ca plasma 73.1 10 0.00022 48.4 8.5 22 145-166 186-207 (941)
174 PHA03398 viral phosphatase sup 72.6 5.4 0.00012 42.8 4.9 41 719-759 148-189 (303)
175 PRK10725 fructose-1-P/6-phosph 71.9 11 0.00024 37.6 6.9 35 723-758 92-126 (188)
176 TIGR01689 EcbF-BcbF capsule bi 70.1 4.1 8.8E-05 38.1 3.0 33 717-749 23-55 (126)
177 COG1877 OtsB Trehalose-6-phosp 68.3 74 0.0016 33.9 12.3 170 712-881 34-218 (266)
178 TIGR01680 Veg_Stor_Prot vegeta 66.4 30 0.00065 36.8 8.8 29 718-746 145-173 (275)
179 PRK10748 flavin mononucleotide 65.9 14 0.00031 38.6 6.6 28 718-746 113-140 (238)
180 TIGR02251 HIF-SF_euk Dullard-l 65.5 5.2 0.00011 39.2 2.9 45 712-757 36-80 (162)
181 KOG0210 P-type ATPase [Inorgan 65.2 38 0.00082 40.2 9.8 182 57-245 85-290 (1051)
182 KOG3040 Predicted sugar phosph 62.3 15 0.00032 36.9 5.2 49 707-755 12-60 (262)
183 TIGR01663 PNK-3'Pase polynucle 61.6 23 0.00051 41.6 7.7 27 719-745 198-224 (526)
184 PLN02177 glycerol-3-phosphate 61.6 47 0.001 38.9 10.2 43 845-888 173-215 (497)
185 KOG4383 Uncharacterized conser 60.5 26 0.00056 41.1 7.4 35 144-178 162-196 (1354)
186 TIGR01452 PGP_euk phosphoglyco 59.2 19 0.00041 38.8 6.1 50 711-760 11-63 (279)
187 COG0474 MgtA Cation transport 58.9 61 0.0013 41.3 11.3 166 145-383 160-330 (917)
188 TIGR01106 ATPase-IIC_X-K sodiu 57.4 4.7E+02 0.01 33.8 19.0 204 145-422 161-369 (997)
189 PF12791 RsgI_N: Anti-sigma fa 54.9 19 0.00041 28.2 3.9 39 134-172 3-42 (56)
190 PTZ00445 p36-lilke protein; Pr 53.1 23 0.00049 36.1 4.9 29 719-747 76-104 (219)
191 COG0637 Predicted phosphatase/ 51.6 40 0.00086 34.9 6.8 43 717-759 85-127 (221)
192 COG1011 Predicted hydrolase (H 50.2 80 0.0017 32.3 8.9 41 718-759 99-139 (229)
193 TIGR01493 HAD-SF-IA-v2 Haloaci 49.6 14 0.0003 36.4 2.9 34 718-758 90-123 (175)
194 TIGR02468 sucrsPsyn_pln sucros 47.6 1.6E+02 0.0035 37.6 12.2 66 823-888 924-1002(1050)
195 COG0647 NagD Predicted sugar p 44.9 26 0.00057 37.3 4.2 46 710-755 16-61 (269)
196 TIGR01647 ATPase-IIIA_H plasma 44.1 1.6E+02 0.0034 36.8 11.4 24 643-666 443-466 (755)
197 PF13380 CoA_binding_2: CoA bi 43.0 36 0.00078 31.2 4.3 37 721-757 66-103 (116)
198 PF12689 Acid_PPase: Acid Phos 40.4 47 0.001 32.8 4.9 41 718-758 45-86 (169)
199 PF04551 GcpE: GcpE protein; 39.5 3.8E+02 0.0083 29.7 11.9 168 631-889 146-326 (359)
200 PRK10444 UMP phosphatase; Prov 38.3 2.2E+02 0.0047 30.0 10.0 24 861-884 191-215 (248)
201 TIGR02250 FCP1_euk FCP1-like p 38.2 50 0.0011 32.1 4.7 45 713-758 53-97 (156)
202 COG3700 AphA Acid phosphatase 37.7 72 0.0016 31.3 5.5 38 720-757 116-157 (237)
203 TIGR01460 HAD-SF-IIA Haloacid 37.1 61 0.0013 33.9 5.5 47 711-757 7-57 (236)
204 smart00831 Cation_ATPase_N Cat 36.9 92 0.002 24.8 5.4 40 280-319 23-62 (64)
205 cd02071 MM_CoA_mut_B12_BD meth 36.5 1E+02 0.0023 28.4 6.4 80 653-757 22-103 (122)
206 TIGR00612 ispG_gcpE 1-hydroxy- 34.4 6.7E+02 0.014 27.6 13.7 100 642-760 148-255 (346)
207 COG1188 Ribosome-associated he 33.1 58 0.0012 28.9 3.7 44 130-178 27-70 (100)
208 PF03120 DNA_ligase_OB: NAD-de 31.9 26 0.00057 29.9 1.4 25 151-175 45-70 (82)
209 PF12710 HAD: haloacid dehalog 31.6 20 0.00044 35.6 0.8 16 418-433 1-16 (192)
210 PF12148 DUF3590: Protein of u 31.2 34 0.00074 29.3 2.0 24 148-171 58-81 (85)
211 PLN03064 alpha,alpha-trehalose 30.4 1.2E+03 0.026 29.8 15.9 36 721-756 625-661 (934)
212 PRK08508 biotin synthase; Prov 30.4 5.7E+02 0.012 27.4 11.8 38 723-760 101-154 (279)
213 TIGR01501 MthylAspMutase methy 30.1 2.1E+02 0.0046 27.0 7.3 80 653-757 24-111 (134)
214 TIGR01652 ATPase-Plipid phosph 28.6 1.4E+03 0.031 29.7 17.1 171 73-245 23-215 (1057)
215 COG2503 Predicted secreted aci 28.4 3.3E+02 0.0071 28.5 8.6 38 721-758 125-166 (274)
216 cd02067 B12-binding B12 bindin 28.4 1.8E+02 0.0039 26.4 6.6 80 653-757 22-103 (119)
217 TIGR01458 HAD-SF-IIA-hyp3 HAD- 28.2 1E+02 0.0022 32.7 5.5 28 721-748 123-150 (257)
218 PF13253 DUF4044: Protein of u 27.8 2E+02 0.0044 20.3 4.8 19 288-306 3-21 (35)
219 TIGR00676 fadh2 5,10-methylene 27.0 2.5E+02 0.0053 30.1 8.2 83 645-746 15-99 (272)
220 cd06919 Asp_decarbox Aspartate 26.6 99 0.0022 27.9 4.1 83 546-677 18-100 (111)
221 TIGR00223 panD L-aspartate-alp 25.6 1E+02 0.0022 28.5 4.0 84 545-677 18-101 (126)
222 COG0279 GmhA Phosphoheptose is 25.6 1.8E+02 0.004 28.4 6.0 31 721-751 123-153 (176)
223 PRK05449 aspartate alpha-decar 24.8 1.1E+02 0.0024 28.4 4.1 83 546-677 19-101 (126)
224 TIGR01662 HAD-SF-IIIA HAD-supe 24.1 5.6E+02 0.012 23.4 9.6 95 646-758 29-126 (132)
225 COG1533 SplB DNA repair photol 23.9 3.2E+02 0.007 29.7 8.3 89 647-757 105-213 (297)
226 PF09926 DUF2158: Uncharacteri 23.1 50 0.0011 25.7 1.4 13 157-169 2-14 (53)
227 TIGR02244 HAD-IG-Ncltidse HAD 22.8 1.1E+02 0.0025 33.8 4.7 37 720-756 186-223 (343)
228 PF08645 PNK3P: Polynucleotide 22.7 70 0.0015 31.2 2.8 22 721-742 32-53 (159)
229 PF02219 MTHFR: Methylenetetra 22.6 2.3E+02 0.005 30.6 7.0 44 704-747 68-112 (287)
230 TIGR02826 RNR_activ_nrdG3 anae 22.1 1.3E+02 0.0028 28.9 4.4 49 708-757 63-112 (147)
231 PTZ00413 lipoate synthase; Pro 22.1 5.2E+02 0.011 29.2 9.4 54 704-757 191-253 (398)
232 COG3981 Predicted acetyltransf 21.9 1.6E+02 0.0035 29.0 4.9 116 643-760 13-158 (174)
233 PRK10053 hypothetical protein; 21.9 71 0.0015 29.9 2.4 30 398-427 60-89 (130)
234 COG2217 ZntA Cation transport 21.6 2.2E+02 0.0049 34.9 7.2 79 643-753 538-617 (713)
235 PF06941 NT5C: 5' nucleotidase 21.1 73 0.0016 31.9 2.6 29 718-746 73-101 (191)
236 TIGR01524 ATPase-IIIB_Mg magne 21.0 2.9E+02 0.0063 35.0 8.4 24 643-666 516-539 (867)
237 cd00860 ThrRS_anticodon ThrRS 20.8 1.7E+02 0.0037 24.7 4.6 46 712-757 6-52 (91)
238 cd01137 PsaA Metal binding pro 20.7 3.7E+02 0.008 28.9 8.2 53 705-757 194-250 (287)
239 PF00690 Cation_ATPase_N: Cati 20.7 1.2E+02 0.0027 24.6 3.4 37 280-316 33-69 (69)
240 cd03409 Chelatase_Class_II Cla 20.5 2E+02 0.0043 25.0 5.1 28 712-739 36-64 (101)
241 TIGR00640 acid_CoA_mut_C methy 20.5 2.5E+02 0.0055 26.4 5.9 81 653-758 25-107 (132)
242 cd05017 SIS_PGI_PMI_1 The memb 20.4 1.2E+02 0.0025 27.8 3.6 25 721-745 57-81 (119)
No 1
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=3.3e-159 Score=1410.79 Aligned_cols=813 Identities=60% Similarity=0.986 Sum_probs=735.1
Q ss_pred CCCCeEEEeCCCCccccCCCCCCCCeeecCCcchhhhhHHHHHHHhhhHHHHHHHHHHHHhcccCCCCCCchhhhhHHHH
Q 002671 33 QGCPRVIYCNQPHMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIV 112 (894)
Q Consensus 33 ~~~~r~~~~n~~~~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~v 112 (894)
++.+|++++|+|..+..+..+|..|.|+|+||++++|+|++||+||+|++|+|||++++++++|++|++++++++||++|
T Consensus 11 ~~~~R~~~~n~~~~~~~~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip~~~~~~~~~~~pl~~v 90 (1151)
T KOG0206|consen 11 PGFSRVVYCNDPLPFEAPQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIPLSPFNPYTTLVPLLFV 90 (1151)
T ss_pred CCCceEEeCCCCCcchhhhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCcccccCccceeeceeee
Confidence 46689999999965555667899999999999999999999999999999999999999999998899999999999999
Q ss_pred HHHHHHHHHHHHHHHhhchhhhccceEEEEeCCCeEEEeeccccccCcEEEeecCcccCceEEEeeecCCCCcEEEEecc
Q 002671 113 VGVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMN 192 (894)
Q Consensus 113 ~~~~~~~~~~~d~~r~k~~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~ 192 (894)
+.++++||++|||+|+++|+++|++++.|+++++.+++..|++|+|||+|++..++.+|||++||+|++++|.|||+|++
T Consensus 91 l~~t~iKd~~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~n 170 (1151)
T KOG0206|consen 91 LGITAIKDAIEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETAN 170 (1151)
T ss_pred ehHHHHHHHHhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEee
Confidence 99999999999999999999999999999954445999999999999999999999999999999999999999999999
Q ss_pred cCCCCcceeecccccCCCCCchhhhccceeEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEE
Q 002671 193 LDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVI 272 (894)
Q Consensus 193 LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~g~Vv 272 (894)
||||||+|.|++...+......+.+..+.+.|.||+||+++|.|.|++..+++..|++++|+++|||+|+||+|++|+|+
T Consensus 171 LDGEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv 250 (1151)
T KOG0206|consen 171 LDGETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVV 250 (1151)
T ss_pred cCCccccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEE
Confidence 99999999999988887644556677899999999999999999999998888779999999999999999999999999
Q ss_pred EecccchhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCC---CccccCCCCCccccCCCCCc
Q 002671 273 FTGHDSKVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTP---QWWYLKPKETDVYFNPGKPL 349 (894)
Q Consensus 273 ~tG~~Tk~~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~---~~~yl~~~~~~~~~~~~~~~ 349 (894)
+||++||+|+|+..++.|++++++.+|+.+..++++++++|++++++..+|...... .+||+.... +.
T Consensus 251 ~tG~dtK~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~---------~~ 321 (1151)
T KOG0206|consen 251 FTGHDTKLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSE---------AA 321 (1151)
T ss_pred EcCCcchHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCch---------HH
Confidence 999999999999999999999999999999999999999999999999999875432 367764422 34
Q ss_pred hhHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhccccccccCCCCCeEEeccccccccccceEEEecCCCceeec
Q 002671 350 VPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCN 429 (894)
Q Consensus 350 ~~~~~~~~~~i~ll~~~iP~sL~v~l~i~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~e~Lg~v~~I~~DKTGTLT~n 429 (894)
..++..|++++++|+.++|+|||+++++++++|+.+|++|.+||+++.+.++.+|+++++|+||||+||++|||||||+|
T Consensus 322 ~~~~~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N 401 (1151)
T KOG0206|consen 322 YAGFVHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQN 401 (1151)
T ss_pred HHHHHHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccc
Confidence 56678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEEcCcccCCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCCccchhhhcccCCCCccccccCCCccccccc
Q 002671 430 QMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRL 509 (894)
Q Consensus 430 ~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 509 (894)
.|+|++|+|+|..|+...++.+.....+.+. + ... ...+++.|.|+++
T Consensus 402 ~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~------------------------------~-~~~-~~~~~~~f~~~~~ 449 (1151)
T KOG0206|consen 402 SMEFKKCSINGTSYGRNVTEVEAALAKRSGG------------------------------D-VNE-HKIKGFTFEDSRL 449 (1151)
T ss_pred eeeeecccccCcccccCCChhhcccCccccc------------------------------c-ccc-cccccceeccchh
Confidence 9999999999999999877643222111000 0 011 3456789999999
Q ss_pred cccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCCeeeecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCC
Q 002671 510 MDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQ 589 (894)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~i~i~~~~~~~g~ 589 (894)
+++.+...+....+.+|++++|+||++.++.+++.+.+.|+++||||.||+++|+.+|+.|..|+++.+.+...+
T Consensus 450 ~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g----- 524 (1151)
T KOG0206|consen 450 VDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELG----- 524 (1151)
T ss_pred hccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccc-----
Confidence 999999889999999999999999999999876666899999999999999999999999999999999998433
Q ss_pred CceeEEEEEEeecCCCCCceEEEEEEcCCCcEEEEEccchhhhhHhhccCccccHHHHHHHHHHHHhcCCeEEEEEEEeC
Q 002671 590 PVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQL 669 (894)
Q Consensus 590 ~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l 669 (894)
...+|++|+++||+|.|||||||||+|+|++.|||||||++|+++++..++...+.+..|+++||.+||||||+|||++
T Consensus 525 -~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l 603 (1151)
T KOG0206|consen 525 -VEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYREL 603 (1151)
T ss_pred -cceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhcc
Confidence 3689999999999999999999999999999999999999999999988888999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhhhhhCHHHHHHHHHHhhhcccEEEEeeeecccccCChHHHHHHHHHcCCeEEEEcCCcHHHHH
Q 002671 670 DESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAI 749 (894)
Q Consensus 670 ~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~ 749 (894)
+++||.+|+++|++|++++ .||+++++++++.+|+||+++|+|||||+||+|||++|+.|++||||+||||||++|||+
T Consensus 604 ~e~eY~~w~~~~~~A~ts~-~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAi 682 (1151)
T KOG0206|consen 604 DEEEYEEWNERYNEAKTSL-TDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAI 682 (1151)
T ss_pred CHHHHHHHHHHHHHHHhhc-cCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHH
Confidence 9999999999999999999 699999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccccCceEEEEecCCchhhHHHHH-HHHHHhHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcchHHHHH
Q 002671 750 NIGFACSLLRQGMKQICITALNSDSVGKAAK-EAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHH 828 (894)
Q Consensus 750 ~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~ 828 (894)
+||++|+++.++++++.++..+.+....... ....+.+..+..........+... ..+++||||++|.++++++.+.+
T Consensus 683 NIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~aLVIDGktl~~aL~~~~~~~ 761 (1151)
T KOG0206|consen 683 NIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSE-KPFALVIDGKTLAYALEDELRKK 761 (1151)
T ss_pred HHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCc-CCceEEEECHHHHhhhCchhhHH
Confidence 9999999999999999999887542111110 122233333332222222222112 47999999999999999999999
Q ss_pred HHHHhhccCeEEEEeCCchhHHHHHHHHhhcCCCEEEEEcCChhcHHHHHhCCccEEecCccccCC
Q 002671 829 FLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGCDG 894 (894)
Q Consensus 829 ~~~~~~~~~~vv~~r~~P~qK~~iv~~lk~~~~~~v~~iGDG~ND~~ml~~AdvGI~i~g~eg~qa 894 (894)
|+.++..|++|+|||++|.||+.+|+++|+..+.+|+|||||+||++|||+|||||||+|+||+||
T Consensus 762 Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQA 827 (1151)
T KOG0206|consen 762 FLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQA 827 (1151)
T ss_pred HHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhh
Confidence 999999999999999999999999999987789999999999999999999999999999999998
No 2
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=8e-145 Score=1337.11 Aligned_cols=816 Identities=38% Similarity=0.605 Sum_probs=683.2
Q ss_pred CCeEEEeCCCCccccCCCCCCCCeeecCCcchhhhhHHHHHHHhhhHHHHHHHHHHHHhccc-CCCCCCchhhhhHHHHH
Q 002671 35 CPRVIYCNQPHMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP-LSPFSPVSMLLPLAIVV 113 (894)
Q Consensus 35 ~~r~~~~n~~~~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~-~~~~~~~~~~~~l~~v~ 113 (894)
..|.|++|+|.. .+.+.+|++|.|+|+||++|+|+|++||+||+|++|+|||+++++|++| +++.+++++++||++|+
T Consensus 69 ~~r~i~~~~~~~-~~~~~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~~t~~~PL~~vl 147 (1178)
T PLN03190 69 DARLVYLNDPEK-SNERFEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGASILPLAFVL 147 (1178)
T ss_pred CceEEEcCCCCc-ccccccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCcchHHHHHHHHH
Confidence 479999999853 2334579999999999999999999999999999999999999999999 89999999999999999
Q ss_pred HHHHHHHHHHHHHHhhchhhhccceEEEEeCCCeEEEeeccccccCcEEEeecCcccCceEEEeeecCCCCcEEEEeccc
Q 002671 114 GVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNL 193 (894)
Q Consensus 114 ~~~~~~~~~~d~~r~k~~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~L 193 (894)
+++++++++||++|+++|+++|+++++|+ ++|.+++++|++|+|||||+|++||.||||++||+|++++|.|+|||++|
T Consensus 148 ~v~~ike~~Ed~~r~k~d~~~N~~~~~v~-~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~L 226 (1178)
T PLN03190 148 LVTAVKDAYEDWRRHRSDRIENNRLAWVL-VDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINL 226 (1178)
T ss_pred HHHHHHHHHHHHHHHHhHHhhcCcEEEEE-ECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEcccc
Confidence 99999999999999999999999999999 89999999999999999999999999999999999999999999999999
Q ss_pred CCCCcceeecccccCCCCCchhhhccceeEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEE
Q 002671 194 DGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIF 273 (894)
Q Consensus 194 tGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~g~Vv~ 273 (894)
||||+|+.|.+++.+... ......+.|.|+||.||+++|.|.|++.++|+..+++.+|+++|||.|+||+|++|+|+|
T Consensus 227 dGEt~~k~k~~~~~~~~~--~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVY 304 (1178)
T PLN03190 227 DGESNLKTRYAKQETLSK--IPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVY 304 (1178)
T ss_pred CCeeeeeEecccchhhhc--chhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEE
Confidence 999999999988765321 122345789999999999999999999999999999999999999999999999999999
Q ss_pred ecccchhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCC-------C
Q 002671 274 TGHDSKVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNP-------G 346 (894)
Q Consensus 274 tG~~Tk~~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~-------~ 346 (894)
||+|||+++|...++.|+|++|+.+|+++.+++++++++|++++++..+|.....+..||+.+.....+... .
T Consensus 305 TG~dTK~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 384 (1178)
T PLN03190 305 CGRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYY 384 (1178)
T ss_pred echhhhHhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999887876543344555432110000000 0
Q ss_pred CCchhHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhccccccccCCCCCeEEeccccccccccceEEEecCCCce
Q 002671 347 KPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTL 426 (894)
Q Consensus 347 ~~~~~~~~~~~~~i~ll~~~iP~sL~v~l~i~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~e~Lg~v~~I~~DKTGTL 426 (894)
......+..|+.+++++..+||+||++++++++++|+++|.+|.+||+++.+.++.||+++++|+||+|+|||+||||||
T Consensus 385 ~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTL 464 (1178)
T PLN03190 385 GWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTL 464 (1178)
T ss_pred hhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCcc
Confidence 01123356788889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecceEEEEEEEcCcccCCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCCccchhhhcccCCCCccccccCCCcccc
Q 002671 427 TCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFED 506 (894)
Q Consensus 427 T~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 506 (894)
|+|+|+|++|+++|..|+.+....+..... .. ....+ . ....+...+.+
T Consensus 465 T~N~M~fk~~~i~g~~y~~~~~~~~~~~~~---~~-------------------~~~~~-------~--~~~~~~~~~~~ 513 (1178)
T PLN03190 465 TENKMEFQCASIWGVDYSDGRTPTQNDHAG---YS-------------------VEVDG-------K--ILRPKMKVKVD 513 (1178)
T ss_pred ccceEEEEEEEECCEEcccccccchhhhhc---cc-------------------ccccc-------c--cccccccccCC
Confidence 999999999999999997532211000000 00 00000 0 00000000011
Q ss_pred ccccccCC--CCCCChhHHHHHHHHHhhcceeeecccCC--C---CCeeeecCChhHHHHHHHHHHCCcEEEEEcCCeEE
Q 002671 507 SRLMDGNW--LKEPNVDTLLLFFRILAICHTAIPELNEE--T---GNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVF 579 (894)
Q Consensus 507 ~~~~~~~~--~~~~~~~~~~~~~~~lalc~~~~~~~~~~--~---~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~i~ 579 (894)
+.+..... ...+....+.+|+.++|+||++.++..++ . +.+.|+++||||.||+++|+.+|+.+.+|+++.+.
T Consensus 514 ~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~ 593 (1178)
T PLN03190 514 PQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIV 593 (1178)
T ss_pred HHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEE
Confidence 11111100 11122345788999999999999853211 1 24679999999999999999999999999999988
Q ss_pred EEecCCCCCCCceeEEEEEEeecCCCCCceEEEEEEcCCCcEEEEEccchhhhhHhhccC-ccccHHHHHHHHHHHHhcC
Q 002671 580 IRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKN-GRMYEEATTKLLNEYGEAG 658 (894)
Q Consensus 580 i~~~~~~~g~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~~~~-~~~~~~~~~~~l~~~~~~G 658 (894)
+...+ ....|++++++||+|+|||||||++++++++++||||||++|+++|+.. +...++.+.+++++|+.+|
T Consensus 594 i~~~~------~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~G 667 (1178)
T PLN03190 594 IDIHG------ERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLG 667 (1178)
T ss_pred Eeecc------ceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcC
Confidence 87543 2678999999999999999999999999999999999999999999763 3346778899999999999
Q ss_pred CeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhCHHHHHHHHHHhhhcccEEEEeeeecccccCChHHHHHHHHHcCCeEE
Q 002671 659 LRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIW 738 (894)
Q Consensus 659 lr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~ 738 (894)
+|||++|||+++++||.+|.++|.+|+.++ .+|++.++++++.+|+||+++|+++++|+||++++++|+.|+++||+||
T Consensus 668 lRtL~lA~k~l~~~e~~~~~~~~~~a~~~~-~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~ 746 (1178)
T PLN03190 668 LRTLVVGMRELNDSEFEQWHFSFEAASTAL-IGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVW 746 (1178)
T ss_pred CceEEEEEEeCCHHHHhhHHHHHHHhhhhh-hhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEE
Confidence 999999999999999999999999999999 8999999999999999999999999999999999999999999999999
Q ss_pred EEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhh---hh-hhccCCCCCceEEEEeC
Q 002671 739 VLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNAS---QM-IKLERDPHAAYALIIEG 814 (894)
Q Consensus 739 ~lTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~lvi~G 814 (894)
|+|||+.+||++||++|||++++++.+.++..+.+.+........... ....... +. .........+++++++|
T Consensus 747 mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG 824 (1178)
T PLN03190 747 VLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMS--KKLTTVSGISQNTGGSSAAASDPVALIIDG 824 (1178)
T ss_pred EECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhh--hhccccccccccccccccccCCceEEEEEc
Confidence 999999999999999999999999888887765443322221111000 0000000 00 00111234567899999
Q ss_pred chhhhhcchHHHHHHHHHhhccCeEEEEeCCchhHHHHHHHHhhcCCCEEEEEcCChhcHHHHHhCCccEEecCccccCC
Q 002671 815 KTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGCDG 894 (894)
Q Consensus 815 ~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~~P~qK~~iv~~lk~~~~~~v~~iGDG~ND~~ml~~AdvGI~i~g~eg~qa 894 (894)
.+|..++++++.++|.+++..|++|||||++|.||+++|+++|+..+++|+|||||+||++|||+||||||++|+||+||
T Consensus 825 ~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA 904 (1178)
T PLN03190 825 TSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQA 904 (1178)
T ss_pred HHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHH
Confidence 99999998888899999999999999999999999999999998556899999999999999999999999999999998
No 3
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=2e-136 Score=1278.65 Aligned_cols=797 Identities=51% Similarity=0.844 Sum_probs=678.6
Q ss_pred CCCCeeecCCcchhhhhHHHHHHHhhhHHHHHHHHHHHHhccc-CCCCCCchhhhhHHHHHHHHHHHHHHHHHHHhhchh
Q 002671 54 YCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP-LSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDK 132 (894)
Q Consensus 54 ~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~-~~~~~~~~~~~~l~~v~~~~~~~~~~~d~~r~k~~~ 132 (894)
|++|.|+|+||++|+|+|++||+||+|++|+|||+++++|++| +++.+++++++||+++++++++++++||++|+++|+
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~ 80 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDK 80 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 7899999999999999999999999999999999999999999 888999999999999999999999999999999999
Q ss_pred hhccceEEEEeCC-CeEEEeeccccccCcEEEeecCcccCceEEEeeecCCCCcEEEEecccCCCCcceeecccccCCCC
Q 002671 133 EVNARKVSVHVGN-GVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPL 211 (894)
Q Consensus 133 ~~n~~~~~V~~r~-g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~ 211 (894)
++|+++++|+ |+ |++++++|++|+|||||+|++||.||||++||+|++++|.|+||||+|||||+|+.|++...+...
T Consensus 81 ~~n~~~~~v~-~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~~ 159 (1057)
T TIGR01652 81 EVNNRLTEVL-EGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKM 159 (1057)
T ss_pred HHhCcEEEEE-CCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchhhhcc
Confidence 9999999999 75 899999999999999999999999999999999999999999999999999999999987766544
Q ss_pred CchhhhccceeEEEeeCCCCCceeEEEEEEECC-eeeecCCCCeeecceEeecCCeEEEEEEEecccchhhhccCCCCCC
Q 002671 212 NEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDR-ELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSK 290 (894)
Q Consensus 212 ~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g-~~~~l~~~nil~rgs~l~nt~~~~g~Vv~tG~~Tk~~~~~~~~~~k 290 (894)
.....+..++|.|+||.||+++|.|.|++.+++ ...|++.+|+++|||.++||+|++|+|+|||++||+++|...++.|
T Consensus 160 ~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~~~~~k 239 (1057)
T TIGR01652 160 LDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQAPSK 239 (1057)
T ss_pred CChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCCCCccc
Confidence 445566678999999999999999999999988 7789999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCCCchhHHHHHHHHHHHhhccccch
Q 002671 291 RSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPIS 370 (894)
Q Consensus 291 ~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~s 370 (894)
+|++++.+|+++.+++.+++++|++++++..+|........||+..+.. ..+.....+..|++++++++.+||++
T Consensus 240 ~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~-----~~~~~~~~~~~~~~~~~L~~~~IPis 314 (1057)
T TIGR01652 240 RSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVS-----ERNAAANGFFSFLTFLILFSSLIPIS 314 (1057)
T ss_pred ccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcc-----cccchhHHHHHHHHHHHHHhhhccee
Confidence 9999999999999999999999999999887776544344788753221 12223445668999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhccccccccCCCCCeEEeccccccccccceEEEecCCCceeecceEEEEEEEcCcccCCCchHH
Q 002671 371 LYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEV 450 (894)
Q Consensus 371 L~v~l~i~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~e~Lg~v~~I~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~ 450 (894)
|++++++++++++.+|++|.+||++...+++.+|+++++|+||+|++||+|||||||+|+|+|++|+++|..|+...++.
T Consensus 315 L~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~ 394 (1057)
T TIGR01652 315 LYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEI 394 (1057)
T ss_pred eeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchH
Confidence 99999999999999999999999887778999999999999999999999999999999999999999999998654432
Q ss_pred HHHHHHhhhhchhhhhhhhhhcccCCCCCccchhhhcccCCCCccccccCCCccccccccccCCCCCCChhHHHHHHHHH
Q 002671 451 ELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRIL 530 (894)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 530 (894)
........+... +. +.......+.++|.++.+.+......+..+.+.+|+.++
T Consensus 395 ~~~~~~~~~~~~---------------~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 447 (1057)
T TIGR01652 395 KDAIRERLGSYV---------------EN------------ENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLAL 447 (1057)
T ss_pred HHHhhhcccccc---------------cc------------cccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHH
Confidence 211110000000 00 000000001133444444332222233445678999999
Q ss_pred hhcceeeeccc-CCCCCeeeecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEEEeecCCCCCce
Q 002671 531 AICHTAIPELN-EETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKR 609 (894)
Q Consensus 531 alc~~~~~~~~-~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~i~i~~~~~~~g~~~~~~~~il~~~~F~s~rkr 609 (894)
++||++.+..+ ++.+.+.|+++||+|.||+++|+.+|+.+.+|+.+.+.+.... .| ....|++++.+||+|+|||
T Consensus 448 ~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~--~~--~~~~~~il~~~pF~s~rKr 523 (1057)
T TIGR01652 448 ALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEM--HG--ETKEYEILNVLEFNSDRKR 523 (1057)
T ss_pred HhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEe--CC--CEEEEEEEEecccCCCCCe
Confidence 99999998752 2234588999999999999999999999999988754433211 12 2578999999999999999
Q ss_pred EEEEEEcCCCcEEEEEccchhhhhHhhccCccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhh
Q 002671 610 MSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIG 689 (894)
Q Consensus 610 msviv~~~~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~ 689 (894)
|||||+++++++++|+||||++|+++|...++...+.+.+++++|+.+|+|||++|||.++++|+.+|.++|++|+.++
T Consensus 524 mSviv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~- 602 (1057)
T TIGR01652 524 MSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTAL- 602 (1057)
T ss_pred EEEEEEeCCCeEEEEEeCcHHHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhh-
Confidence 9999999888999999999999999998654456788899999999999999999999999999999999999999998
Q ss_pred hCHHHHHHHHHHhhhcccEEEEeeeecccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEec
Q 002671 690 ADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITA 769 (894)
Q Consensus 690 ~~r~~~l~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~~~i~~ 769 (894)
.+|++.+++.++.+|+||+|+|++|+||+||+||+++|+.|++|||||||+|||+++||++||++|||++++.+.+.++.
T Consensus 603 ~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~ 682 (1057)
T TIGR01652 603 TDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITS 682 (1057)
T ss_pred hhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEec
Confidence 79999999999999999999999999999999999999999999999999999999999999999999998888888887
Q ss_pred CCchhhHHHHHHHHHHhHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcchHHHHHHHHHhhccCeEEEEeCCchhH
Q 002671 770 LNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQK 849 (894)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~~P~qK 849 (894)
.+.+..... +..+..+........ .......+++++++|++|+.+++++++.+|.+++..|+++||||++|+||
T Consensus 683 ~~~~~~~~~-----~~~i~~~~~~~~~~~-~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK 756 (1057)
T TIGR01652 683 ESLDATRSV-----EAAIKFGLEGTSEEF-NNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQK 756 (1057)
T ss_pred CchhhhHHH-----HHHHHHHHHHHHHhh-hhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHH
Confidence 654432211 111111111111111 01123467889999999999998888889999999999999999999999
Q ss_pred HHHHHHHhhcCCCEEEEEcCChhcHHHHHhCCccEEecCccccCC
Q 002671 850 ALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGCDG 894 (894)
Q Consensus 850 ~~iv~~lk~~~~~~v~~iGDG~ND~~ml~~AdvGI~i~g~eg~qa 894 (894)
+++|+.+|+..|++|+|||||+||++||++|||||||+|+||+||
T Consensus 757 ~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA 801 (1057)
T TIGR01652 757 ADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQA 801 (1057)
T ss_pred HHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEecChHHHHH
Confidence 999999998449999999999999999999999999999999886
No 4
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.7e-126 Score=1029.77 Aligned_cols=745 Identities=33% Similarity=0.550 Sum_probs=654.7
Q ss_pred CeEEEeCCCCccccCCCCCCCCeeecCCcchhhhhHHHHHHHhhhHHHHHHHHHHHHhccc-CCCCCCchhhhhHHHHHH
Q 002671 36 PRVIYCNQPHMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP-LSPFSPVSMLLPLAIVVG 114 (894)
Q Consensus 36 ~r~~~~n~~~~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~-~~~~~~~~~~~~l~~v~~ 114 (894)
.|++...... ..++.+|++|.++..||++++|+|..|++||+.+.|+|||+.++.|++| +......+++.||.||+.
T Consensus 63 ~rt~~~~~~~--~~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~ 140 (1051)
T KOG0210|consen 63 GRTVNISFGP--HYRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLT 140 (1051)
T ss_pred CceeecccCC--CcccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHH
Confidence 3565555532 3356789999999999999999999999999999999999999999999 666778899999999999
Q ss_pred HHHHHHHHHHHHHhhchhhhccceEEEEeCCCeEEEeeccccccCcEEEeecCcccCceEEEeeecCCCCcEEEEecccC
Q 002671 115 VSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLD 194 (894)
Q Consensus 115 ~~~~~~~~~d~~r~k~~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~Lt 194 (894)
+++++|+++|++|++.|++.|+.+++++.|+|.... ++++|+|||+|.++++++||||+++|.+++..|.|+|.|..||
T Consensus 141 itl~keavdd~~r~~rd~~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLD 219 (1051)
T KOG0210|consen 141 ITLIKEAVDDLKRRRRDRELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLD 219 (1051)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccC
Confidence 999999999999999999999999999988876555 9999999999999999999999999999999999999999999
Q ss_pred CCCcceeecccccCCCCCchhhhccceeEEEeeCCCCCceeEEEEEEECC--eeeecCCCCeeecceEeecCCeEEEEEE
Q 002671 195 GETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDR--ELYAIDPSQILLRDSKLRNTAHVYGSVI 272 (894)
Q Consensus 195 GEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g--~~~~l~~~nil~rgs~l~nt~~~~g~Vv 272 (894)
|||.+|.|-|.+.++.+..+..+.+++ |..|.|+.+++.|.|++.+.. +..+|+.+|.|+.++.+.. +.++|+|+
T Consensus 220 GETDWKLrl~vp~tQ~l~~~~el~~i~--v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs-~t~~gvVv 296 (1051)
T KOG0210|consen 220 GETDWKLRLPVPRTQHLTEDSELMEIS--VYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVAS-GTAIGVVV 296 (1051)
T ss_pred CcccceeeccchhhccCCcccchheEE--EeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEec-CcEEEEEE
Confidence 999999999999999888887777766 899999999999999999943 3578999999999999985 55999999
Q ss_pred EecccchhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCCCchhH
Q 002671 273 FTGHDSKVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPG 352 (894)
Q Consensus 273 ~tG~~Tk~~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 352 (894)
|||.||+.++|...++.|-.-++..+|.+.+++++++++++++....-++. ..||
T Consensus 297 YTG~dtRsvMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~~------~~wy------------------- 351 (1051)
T KOG0210|consen 297 YTGRDTRSVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGFG------SDWY------------------- 351 (1051)
T ss_pred EecccHHHHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcCC------CchH-------------------
Confidence 999999999999999999999999999999999999998888776554432 3788
Q ss_pred HHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhccccccccCCCCCeEEeccccccccccceEEEecCCCceeecceE
Q 002671 353 LAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMD 432 (894)
Q Consensus 353 ~~~~~~~i~ll~~~iP~sL~v~l~i~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~e~Lg~v~~I~~DKTGTLT~n~m~ 432 (894)
..+++++.+++.+||++|-+.+++++.+.+..|.+|.++ .+..+|++++.|+||+|+|+++|||||||+|+|.
T Consensus 352 -i~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~I------pgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~ 424 (1051)
T KOG0210|consen 352 -IYIIRFLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNI------PGTVVRSSTIPEELGRISYLLTDKTGTLTQNEME 424 (1051)
T ss_pred -HHHHHHHHHHhhhceeEEEEehhHHHhhHhhhcccCCCC------CceeeecCCChHHhcceEEEEecCcCccccchhe
Confidence 578999999999999999999999999999999888765 5789999999999999999999999999999999
Q ss_pred EEEEEEcCcccCCCc-hHHHHHHHHhhhhchhhhhhhhhhcccCCCCCccchhhhcccCCCCccccccCCCccccccccc
Q 002671 433 FLKCSVAGTAYGVSP-SEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMD 511 (894)
Q Consensus 433 ~~~~~i~~~~y~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 511 (894)
|++++.|-..|+.+. ++++.....-...+. ...+..
T Consensus 425 ~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~----------------------------------~~~~~~--------- 461 (1051)
T KOG0210|consen 425 FKKIHLGTVAYSAETMDEVSQHIQSLYTPGR----------------------------------NKGKGA--------- 461 (1051)
T ss_pred eeeeeeeeeeccHhHHHHHHHHHHHhhCCCc----------------------------------cccccc---------
Confidence 999999999987653 233322221100000 000000
Q ss_pred cCCCCCCChhHHHHHHHHHhhcceeeecccCCCCCeeeecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCc
Q 002671 512 GNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPV 591 (894)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~i~i~~~~~~~g~~~ 591 (894)
......+.+..+++..+++|+||+++|..+. +|...||+.||||.|||++....|..+..|+...+.++.+.. .
T Consensus 462 ~~~~k~~~s~rv~~~V~alalCHNVTPv~e~-~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~-----~ 535 (1051)
T KOG0210|consen 462 LSRVKKDMSARVRNAVLALALCHNVTPVFED-DGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLD-----D 535 (1051)
T ss_pred chhhcCcccHHHHHHHHHHHHhccCCcccCC-CceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCC-----c
Confidence 0112234556788999999999999998765 468999999999999999999999999999999999987632 3
Q ss_pred eeEEEEEEeecCCCCCceEEEEEEcC-CCcEEEEEccchhhhhHhhccCccccHHHHHHHHHHHHhcCCeEEEEEEEeCC
Q 002671 592 EREFKILNLLDFTSKRKRMSVIVRDE-DGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLD 670 (894)
Q Consensus 592 ~~~~~il~~~~F~s~rkrmsviv~~~-~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~ 670 (894)
...|+||.+|||+|++|||.+|||++ .+++..|.||||.+|......+ .+.++....+|.+|+|||++|+|.++
T Consensus 536 ~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~N-----dWleEE~gNMAREGLRtLVvakK~Ls 610 (1051)
T KOG0210|consen 536 ELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQYN-----DWLEEECGNMAREGLRTLVVAKKVLS 610 (1051)
T ss_pred ceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccccc-----hhhhhhhhhhhhhcceEEEEEecccC
Confidence 68999999999999999999999996 6999999999999998777654 57888889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhCHHHHHHHHHH-hhhcccEEEEeeeecccccCChHHHHHHHHHcCCeEEEEcCCcHHHHH
Q 002671 671 ESEYSAWNSEFQKAKSSIGADREATLEHVSD-MMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAI 749 (894)
Q Consensus 671 ~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~-~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~ 749 (894)
++||+.|.+.|+.|+.++ .||++++.++-+ .+|+||+++|++|+||+||++|+.+++.||.|||||||||||+.|||+
T Consensus 611 ~~eye~Fe~~y~~A~lSi-~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ 689 (1051)
T KOG0210|consen 611 EEEYEAFEEAYNAAKLSI-SDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAI 689 (1051)
T ss_pred HHHHHHHHHHHHhhhCcc-chHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhhee
Confidence 999999999999999999 899999999887 999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccccCceEEEEecCCchh-hHHHHHHHHHHhHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcchHHHHH
Q 002671 750 NIGFACSLLRQGMKQICITALNSDS-VGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHH 828 (894)
Q Consensus 750 ~ia~~~gl~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~ 828 (894)
.||++.+|+..++.+..+....... ...+ + +. -......+++|+|++|+.++. ..+++
T Consensus 690 ciAkSs~L~sR~q~ihv~~~v~sr~dah~e------------L----~~----lR~k~~~aLvi~G~Sl~~cl~-yye~E 748 (1051)
T KOG0210|consen 690 CIAKSSRLFSRGQYIHVIRSVTSRGDAHNE------------L----NN----LRRKTDCALVIDGESLEFCLK-YYEDE 748 (1051)
T ss_pred eeehhccceecCceEEEEEecCCchHHHHH------------H----HH----hhcCCCcEEEEcCchHHHHHH-HHHHH
Confidence 9999999999988877776654321 1100 0 00 113567899999999998874 67889
Q ss_pred HHHHhhccCeEEEEeCCchhHHHHHHHHhhcCCCEEEEEcCChhcHHHHHhCCccEEecCccccCC
Q 002671 829 FLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGCDG 894 (894)
Q Consensus 829 ~~~~~~~~~~vv~~r~~P~qK~~iv~~lk~~~~~~v~~iGDG~ND~~ml~~AdvGI~i~g~eg~qa 894 (894)
|.++.+.|.+|||||++|.|||++++++|++.++.|++||||.||++|||+||+||||-|+||.||
T Consensus 749 f~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQA 814 (1051)
T KOG0210|consen 749 FIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQA 814 (1051)
T ss_pred HHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeeccccccc
Confidence 999999999999999999999999999999899999999999999999999999999999999998
No 5
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.7e-98 Score=913.70 Aligned_cols=606 Identities=32% Similarity=0.464 Sum_probs=494.5
Q ss_pred cccCCCCCCCCeeecCCc-chhhhhHHHHHHHhhhHHHHHHHHHHHHhccc--CCCCCCchhhhhHHHHHHHHHHHHHHH
Q 002671 47 HKKRPLKYCTNYISTTKY-NFFSYFPKALFEQFNRVANIYFLIAALLSVTP--LSPFSPVSMLLPLAIVVGVSMAKEALE 123 (894)
Q Consensus 47 ~~~~~~~~g~N~i~~~k~-~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~--~~~~~~~~~~~~l~~v~~~~~~~~~~~ 123 (894)
...|+..||.|.+...+. ++| +.++.||.+++.+.++++++++++. +.+.. .....++++++++++..+++
T Consensus 50 ~~~r~~~~G~N~~~~~~~~~~~----~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~--~~~~~I~~~i~~n~~~g~~q 123 (917)
T COG0474 50 VKRRLKKYGPNELPEEKKRSLL----KKFLRQFKDPFIILLLVAALLSAFVGDWVDAG--VDAIVILLVVVINALLGFVQ 123 (917)
T ss_pred HHHHHhhcCCccccccccCcHH----HHHHHHHHHHHHHHHHHHHHHHHHhhcccccC--cceeeehHHHHHHHHHHHHH
Confidence 355778899999997665 444 7899999999999999999999874 11111 22222335556666666788
Q ss_pred HHHHhhc---hhhhccceEEEEeCCCeEEEeeccccccCcEEEeecCcccCceEEEeeecCCCCcEEEEecccCCCCcce
Q 002671 124 DWRRFMQ---DKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLK 200 (894)
Q Consensus 124 d~~r~k~---~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~~~ 200 (894)
+++..++ .+.+.+.+++|+ |||++++|+|++|+|||||+|++||.||||++||++++ .+||||+|||||.|+
T Consensus 124 e~~a~~~l~~lk~~~~~~~~V~-R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~----l~VdEs~LTGES~pv 198 (917)
T COG0474 124 EYRAEKALEALKKMSSPKAKVL-RDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD----LEVDESALTGESLPV 198 (917)
T ss_pred HHHHHHHHHHHHhhccCceEEE-eCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC----ceEEcccccCCCcch
Confidence 8888555 555567899999 89999999999999999999999999999999999774 499999999999999
Q ss_pred eecccccCCCCCchhhhccceeEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEecccchh
Q 002671 201 VKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKV 280 (894)
Q Consensus 201 ~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~g~Vv~tG~~Tk~ 280 (894)
.|.+..... .+.|. .++..|++++||.++++ .+.|+|++||.+|++
T Consensus 199 ~K~~~~~~~----------------~~~~~-----------------~~d~~n~l~sGt~V~~G-~~~giVvaTG~~T~~ 244 (917)
T COG0474 199 EKQALPLTK----------------SDAPL-----------------GLDRDNMLFSGTTVVSG-RAKGIVVATGFETEF 244 (917)
T ss_pred hcccccccc----------------ccccc-----------------cCCccceEEeCCEEEcc-eEEEEEEEEcCccHH
Confidence 999865441 01111 04667888888888854 499999999999999
Q ss_pred hhccCCCC---CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCCCchhHHHHHH
Q 002671 281 MQNATTSP---SKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLV 357 (894)
Q Consensus 281 ~~~~~~~~---~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~ 357 (894)
+++....+ ...+++++.++++..+++.+.++++++.++...+... . .| ...|+
T Consensus 245 G~ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~-~---~~--------------------~~~~~ 300 (917)
T COG0474 245 GKIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGG-N---GL--------------------LESFL 300 (917)
T ss_pred HHHHHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-c---cH--------------------HHHHH
Confidence 88877433 4679999999999999999999999888887633211 1 13 36899
Q ss_pred HHHHHhhccccchhhHHHHHHHHHHHHHHhccccccccCCCCCeEEeccccccccccceEEEecCCCceeecceEEEEEE
Q 002671 358 TALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCS 437 (894)
Q Consensus 358 ~~i~ll~~~iP~sL~v~l~i~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~e~Lg~v~~I~~DKTGTLT~n~m~~~~~~ 437 (894)
+++++++.+||++||+.+++++.+++.+| +++++++|+++++|+||++++||||||||||+|+|+|.+++
T Consensus 301 ~~v~l~va~IPegLp~~vti~la~g~~~m----------ak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~ 370 (917)
T COG0474 301 TALALAVAAVPEGLPAVVTIALALGAQRM----------AKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIY 370 (917)
T ss_pred HHHHHHHhccccchHHHHHHHHHHHHHHH----------HhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEE
Confidence 99999999999999999999999999999 88999999999999999999999999999999999999999
Q ss_pred EcCcccCCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCCccchhhhcccCCCCccccccCCCccccccccccCCCCC
Q 002671 438 VAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKE 517 (894)
Q Consensus 438 i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (894)
+++. +.+.+. ...
T Consensus 371 ~~~~--~~~~~~-----------------------------------------------------------------~~~ 383 (917)
T COG0474 371 INGG--GKDIDD-----------------------------------------------------------------KDL 383 (917)
T ss_pred eCCC--cccccc-----------------------------------------------------------------ccc
Confidence 8741 000000 000
Q ss_pred CChhHHHHHHHHHhhcceeeecccCCCCCeeeecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEE
Q 002671 518 PNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKI 597 (894)
Q Consensus 518 ~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~i~i~~~~~~~g~~~~~~~~i 597 (894)
.......+++..+++||++.+..+ + .|..+||+|.||++++...|+.+ . ... ....|++
T Consensus 384 ~~~~~~~~~l~~~~lc~~~~~~~~-~----~~~~gdptE~Al~~~a~~~~~~~-~--~~~-------------~~~~~~~ 442 (917)
T COG0474 384 KDSPALLRFLLAAALCNSVTPEKN-G----WYQAGDPTEGALVEFAEKLGFSL-D--LSG-------------LEVEYPI 442 (917)
T ss_pred ccchHHHHHHHHHHhcCccccccc-C----ceecCCccHHHHHHHHHhcCCcC-C--HHH-------------Hhhhcce
Confidence 112334478999999999988754 2 67789999999999999998844 1 000 2456789
Q ss_pred EEeecCCCCCceEEEEEEcCCCcEEEEEccchhhhhHhhcc------CccccHHHHHHHHHHHHhcCCeEEEEEEEeCCH
Q 002671 598 LNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSK------NGRMYEEATTKLLNEYGEAGLRTLALAYKQLDE 671 (894)
Q Consensus 598 l~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~~~------~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~ 671 (894)
++.+||+|+|||||||+++.++++++||||||++|+++|+. ..++.++.+....++|+++|||+|++|||.++.
T Consensus 443 ~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~ 522 (917)
T COG0474 443 LAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDR 522 (917)
T ss_pred eEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc
Confidence 99999999999999999987788999999999999999985 223456788899999999999999999997765
Q ss_pred HHHHHHHHHHHHHHhhhhhCHHHHHHHHHHhhhcccEEEEeeeecccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHH
Q 002671 672 SEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINI 751 (894)
Q Consensus 672 ~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~i 751 (894)
.+.. . .. +.+|+||+|+|+++++||+|++++++|+.|++|||+|||+|||+++||++|
T Consensus 523 ~~~~----------------~-----~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aI 580 (917)
T COG0474 523 AEKD----------------D-----EV-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAI 580 (917)
T ss_pred cccc----------------c-----hh-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHH
Confidence 4311 0 11 678999999999999999999999999999999999999999999999999
Q ss_pred HHhccccccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcchHHHHHHHH
Q 002671 752 GFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLG 831 (894)
Q Consensus 752 a~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~ 831 (894)
|++||+..+.. . .++++|..|..+.++++. +
T Consensus 581 a~~~Gi~~~~~--------------------------------------------~-~~vi~G~el~~l~~~el~----~ 611 (917)
T COG0474 581 AKECGIEAEAE--------------------------------------------S-ALVIDGAELDALSDEELA----E 611 (917)
T ss_pred HHHcCCCCCCC--------------------------------------------c-eeEeehHHhhhcCHHHHH----H
Confidence 99999864321 0 579999999988877444 4
Q ss_pred HhhccCeEEEEeCCchhHHHHHHHHhhcCCCEEEEEcCChhcHHHHHhCCccEEecCccccCC
Q 002671 832 LAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGCDG 894 (894)
Q Consensus 832 ~~~~~~~vv~~r~~P~qK~~iv~~lk~~~~~~v~~iGDG~ND~~ml~~AdvGI~i~g~eg~qa 894 (894)
.+..++ ||||++|+||+++|+.+|+ .|++|+|+|||+||+||||+|||||||++ +|+||
T Consensus 612 ~~~~~~--VfARvsP~qK~~IV~~lq~-~g~vVamtGDGvNDapALk~ADVGIamg~-~Gtda 670 (917)
T COG0474 612 LVEELS--VFARVSPEQKARIVEALQK-SGHVVAMTGDGVNDAPALKAADVGIAMGG-EGTDA 670 (917)
T ss_pred HhhhCc--EEEEcCHHHHHHHHHHHHh-CCCEEEEeCCCchhHHHHHhcCccEEecc-cHHHH
Confidence 444455 9999999999999999999 79999999999999999999999999954 77764
No 6
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=2e-89 Score=853.10 Aligned_cols=663 Identities=22% Similarity=0.269 Sum_probs=479.1
Q ss_pred ccCCCCCCCCeeecCCcchhhhhHHHHHHHhhhHHHHHHHHHHHHhcccCCCCCCchhhhhHHHHHHHHHHHHHHHHHHH
Q 002671 48 KKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRR 127 (894)
Q Consensus 48 ~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~d~~r 127 (894)
..++..||+|.+..++.++| +.|+++|..|++++++++++++++ ..++.+.+.++++++++.+...++.++.
T Consensus 146 ~~r~~~yG~N~i~~~~~s~~----~ll~~~~~~p~~i~~i~~~~l~~~----~~~~~~~~~i~~i~~~~~~~~~~~~~k~ 217 (1054)
T TIGR01657 146 AQRKAKYGKNEIEIPVPSFL----ELLKEEVLHPFYVFQVFSVILWLL----DEYYYYSLCIVFMSSTSISLSVYQIRKQ 217 (1054)
T ss_pred HHHHHhcCCCeeecCCCCHH----HHHHHHHhchHHHHHHHHHHHHHh----hhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678899999999887666 889999999999988888778776 3433334444455666777777777777
Q ss_pred hhchhhhc--cceEEEEeCCCeEEEeeccccccCcEEEee--cCcccCceEEEeeecCCCCcEEEEecccCCCCcceeec
Q 002671 128 FMQDKEVN--ARKVSVHVGNGVFSYKPWEKIQVGDIVKVE--KDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKR 203 (894)
Q Consensus 128 ~k~~~~~n--~~~~~V~~r~g~~~~i~~~~L~vGDII~l~--~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~~~~K~ 203 (894)
.++.+.+. ++.++|+ |||+|++|++++|+|||||.|+ +|+.|||||+|++ |.|.||||+|||||.|+.|.
T Consensus 218 ~~~L~~~~~~~~~v~V~-Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~-----g~~~VdES~LTGES~Pv~K~ 291 (1054)
T TIGR01657 218 MQRLRDMVHKPQSVIVI-RNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLS-----GSCIVNESMLTGESVPVLKF 291 (1054)
T ss_pred HHHHHHhhcCCeeEEEE-ECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEe-----CcEEEecccccCCccceecc
Confidence 77666654 4689999 8999999999999999999999 9999999999999 77999999999999999998
Q ss_pred ccccCCCCCchhhhccceeEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeecceEeec------CCeEEEEEEEeccc
Q 002671 204 AMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRN------TAHVYGSVIFTGHD 277 (894)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~n------t~~~~g~Vv~tG~~ 277 (894)
+.+.... ..+. +.. ...+..|+++.||.+.. .|.+.|+|++||.+
T Consensus 292 ~~~~~~~--~~~~-------~~~--------------------~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~ 342 (1054)
T TIGR01657 292 PIPDNGD--DDED-------LFL--------------------YETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFS 342 (1054)
T ss_pred cCCcccc--cccc-------ccc--------------------cccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCcc
Confidence 8643100 0000 000 01233455555555543 36799999999999
Q ss_pred chhhhcc---CCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCCCchhHHH
Q 002671 278 SKVMQNA---TTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLA 354 (894)
Q Consensus 278 Tk~~~~~---~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 354 (894)
|..++.. ..++...+++++.+.+++.+++.+.++.+++.++. ++... ..| ..
T Consensus 343 T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~-~~~~~----~~~--------------------~~ 397 (1054)
T TIGR01657 343 TSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIE-LIKDG----RPL--------------------GK 397 (1054)
T ss_pred ccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcC----CcH--------------------HH
Confidence 9655544 34555678889988888776655444333222211 11111 122 35
Q ss_pred HHHHHHHHhhccccchhhHHHHHHHHHHHHHHhccccccccCCCCCeEEeccccccccccceEEEecCCCceeecceEEE
Q 002671 355 HLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFL 434 (894)
Q Consensus 355 ~~~~~i~ll~~~iP~sL~v~l~i~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~e~Lg~v~~I~~DKTGTLT~n~m~~~ 434 (894)
.|++++.+++.+||++||++++++..++..++ ++++++|+++..+|.||+++++|||||||||+|+|.|.
T Consensus 398 ~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL----------~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~ 467 (1054)
T TIGR01657 398 IILRSLDIITIVVPPALPAELSIGINNSLARL----------KKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLR 467 (1054)
T ss_pred HHHHHHHHHHhhcCchHHHHHHHHHHHHHHHH----------HHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEE
Confidence 78889999999999999999999999999998 88999999999999999999999999999999999999
Q ss_pred EEEEcCcccCCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCCccchhhhcccCCCCccccccCCCccccccccccCC
Q 002671 435 KCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNW 514 (894)
Q Consensus 435 ~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (894)
+++..+...... .. .
T Consensus 468 ~v~~~~~~~~~~-~~------------------------------------------------------------~---- 482 (1054)
T TIGR01657 468 GVQGLSGNQEFL-KI------------------------------------------------------------V---- 482 (1054)
T ss_pred eEecccCccccc-cc------------------------------------------------------------c----
Confidence 987543210000 00 0
Q ss_pred CCCCChhHHHHHHHHHhhcceeeecccCCCCCeeeecCChhHHHHHHHHHHCCcEEEE-EcCC---eE--EEEecCCCCC
Q 002671 515 LKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYR-RTQS---SV--FIRERYPPKG 588 (894)
Q Consensus 515 ~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~-~~~~---~i--~i~~~~~~~g 588 (894)
..........+..++++||++....+ ...++|.|.|+++++ |+.+.. .+.. .. .+... +
T Consensus 483 -~~~~~~~~~~~~~~~a~C~~~~~~~~-------~~~Gdp~E~al~~~~---~~~~~~~~~~~~~~~~~~~i~~~----~ 547 (1054)
T TIGR01657 483 -TEDSSLKPSITHKALATCHSLTKLEG-------KLVGDPLDKKMFEAT---GWTLEEDDESAEPTSILAVVRTD----D 547 (1054)
T ss_pred -ccccccCchHHHHHHHhCCeeEEECC-------EEecCHHHHHHHHhC---CCEEECCCCcccccccccceecc----C
Confidence 00000112246778999999865421 235899999999975 555432 1100 00 00000 0
Q ss_pred CCceeEEEEEEeecCCCCCceEEEEEEcCC-CcEEEEEccchhhhhHhhccCccccHHHHHHHHHHHHhcCCeEEEEEEE
Q 002671 589 QPVEREFKILNLLDFTSKRKRMSVIVRDED-GQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYK 667 (894)
Q Consensus 589 ~~~~~~~~il~~~~F~s~rkrmsviv~~~~-g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k 667 (894)
....|++++.+||+|++||||||++.++ +++++|+|||||.|+++|++.. .++.+.+.+++|+.+|+|||++|||
T Consensus 548 --~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~~--~p~~~~~~~~~~a~~G~RVLalA~k 623 (1054)
T TIGR01657 548 --PPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPET--VPSDYQEVLKSYTREGYRVLALAYK 623 (1054)
T ss_pred --CCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCcC--CChhHHHHHHHHHhcCCEEEEEEEe
Confidence 1357999999999999999999999754 5789999999999999998643 5678888999999999999999999
Q ss_pred eCCHHHHHHHHHHHHHHHhhhhhCHHHHHHHHHHhhhcccEEEEeeeecccccCChHHHHHHHHHcCCeEEEEcCCcHHH
Q 002671 668 QLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMET 747 (894)
Q Consensus 668 ~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~t 747 (894)
++++.++.++.. .+| +.+|+||+|+|+++++|++|++++++|+.|+++||++||+|||++.|
T Consensus 624 ~l~~~~~~~~~~----------~~r--------~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~T 685 (1054)
T TIGR01657 624 ELPKLTLQKAQD----------LSR--------DAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLT 685 (1054)
T ss_pred ecCccchhhhhh----------ccH--------HHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 998543332211 234 56799999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccccccCceEEEEecCCchh-----hHHH-HHHHHHHhHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhc
Q 002671 748 AINIGFACSLLRQGMKQICITALNSDS-----VGKA-AKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYAL 821 (894)
Q Consensus 748 a~~ia~~~gl~~~~~~~~~i~~~~~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~ 821 (894)
|.+||++|||++++...+..+....+. +... .......+.....................+.++++|+++..+.
T Consensus 686 A~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~ 765 (1054)
T TIGR01657 686 AVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQ 765 (1054)
T ss_pred HHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHH
Confidence 999999999998765554443211000 0000 0000000000000000000000011234578999999998764
Q ss_pred chHHHHHHHHHhhccCeEEEEeCCchhHHHHHHHHhhcCCCEEEEEcCChhcHHHHHhCCccEEecCccccCC
Q 002671 822 EDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGCDG 894 (894)
Q Consensus 822 ~~~~~~~~~~~~~~~~~vv~~r~~P~qK~~iv~~lk~~~~~~v~~iGDG~ND~~ml~~AdvGI~i~g~eg~qa 894 (894)
+. ..+.+.++...++ ||||++|+||..+|+.+|+ .|++|+|||||+||+||||+|||||||++.|++.|
T Consensus 766 ~~-~~~~l~~~~~~~~--VfAR~sP~qK~~iV~~lq~-~g~~V~m~GDG~ND~~ALK~AdVGIam~~~das~A 834 (1054)
T TIGR01657 766 AH-SPELLLRLLSHTT--VFARMAPDQKETLVELLQK-LDYTVGMCGDGANDCGALKQADVGISLSEAEASVA 834 (1054)
T ss_pred Hh-hHHHHHHHHhcCe--EEEecCHHHHHHHHHHHHh-CCCeEEEEeCChHHHHHHHhcCcceeeccccceee
Confidence 32 2234555665554 9999999999999999998 89999999999999999999999999998876644
No 7
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=5.4e-90 Score=849.27 Aligned_cols=680 Identities=19% Similarity=0.229 Sum_probs=483.7
Q ss_pred ccccCCCCCCCCeeecCCcchhhhhHHHHHHHhhhHHHHHHHHHHHHhcccCCCCCCchhhhhHHHHHHHHHHHHHHHHH
Q 002671 46 MHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDW 125 (894)
Q Consensus 46 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~d~ 125 (894)
+...|+.+||+|.++.++...++ +.|++||..++.++++++++++++. ..|...++ ++++++++++..+++++
T Consensus 31 ea~~rl~~~G~N~l~~~~~~s~~---~~~l~q~~~~~~~iL~~aails~~~---~~~~~~~i-Il~vv~in~~i~~~QE~ 103 (1053)
T TIGR01523 31 EAQHRLKEVGENRLEADSGIDAK---AMLLHQVCNAMCMVLIIAAAISFAM---HDWIEGGV-ISAIIALNILIGFIQEY 103 (1053)
T ss_pred HHHHHHHHcCCCCCCCCCCCCHH---HHHHHHHhCHHHHHHHHHHHHHHHH---hhHHHHHH-HHhHHHHHHHHHHHHHH
Confidence 34568889999999988754432 8899999999999999999999974 44555444 55777888899999999
Q ss_pred HHhhchhhhcc---ceEEEEeCCCeEEEeeccccccCcEEEeecCcccCceEEEeeecCCCCcEEEEecccCCCCcceee
Q 002671 126 RRFMQDKEVNA---RKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVK 202 (894)
Q Consensus 126 ~r~k~~~~~n~---~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~~~~K 202 (894)
+..++...+.+ .+++|+ |||++++|++++|+|||||.|++||.||||++|+++++ +.||||+|||||.|+.|
T Consensus 104 ~aekal~aL~~l~~~~~~Vi-Rdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~~~----L~VDES~LTGES~pV~K 178 (1053)
T TIGR01523 104 KAEKTMDSLKNLASPMAHVI-RNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKN----FDTDEALLTGESLPVIK 178 (1053)
T ss_pred HHHHHHHHHhccCCCceEEE-eCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEeCc----eEEEchhhcCCCCceec
Confidence 99998766654 789999 89999999999999999999999999999999999765 89999999999999999
Q ss_pred cccccCCCCCchhhhccceeEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEecccchhhh
Q 002671 203 RAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQ 282 (894)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~g~Vv~tG~~Tk~~~ 282 (894)
.+...... . .+ ..........|+||.+++|+ +.|+|++||.+|.+++
T Consensus 179 ~~~~~~~~-~-~~----------~~~~d~~n~lf~GT~V~~G~---------------------g~~vVvatG~~T~~Gk 225 (1053)
T TIGR01523 179 DAHATFGK-E-ED----------TPIGDRINLAFSSSAVTKGR---------------------AKGICIATALNSEIGA 225 (1053)
T ss_pred cccccccc-c-cc----------CCcccCCCccccCceEEeee---------------------EEEEEEEecCccHHHH
Confidence 86421100 0 00 00001122345666666555 9999999999997765
Q ss_pred ccCC---CC-----------------------------------CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 002671 283 NATT---SP-----------------------------------SKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKI 324 (894)
Q Consensus 283 ~~~~---~~-----------------------------------~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~ 324 (894)
.... .. ..+||+++++++++.+++.+.++++++.+++..+
T Consensus 226 Ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~-- 303 (1053)
T TIGR01523 226 IAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF-- 303 (1053)
T ss_pred HHHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh--
Confidence 4331 10 0149999999999999888888887776654221
Q ss_pred cccCCCccccCCCCCccccCCCCCchhHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhccccccccCCCCCeEEe
Q 002671 325 NYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQAR 404 (894)
Q Consensus 325 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~l~i~~~~~~~~i~~d~~m~~~~~~~~~~vr 404 (894)
. .| ...+++++.+++.++|++||+.++++..+++.+| ++++++||
T Consensus 304 ~-----~~--------------------~~~~~~av~l~Va~VPegLp~~vti~La~g~~rM----------ak~~~lVr 348 (1053)
T TIGR01523 304 D-----VD--------------------KEVAIYAICLAISIIPESLIAVLSITMAMGAANM----------SKRNVIVR 348 (1053)
T ss_pred h-----hh--------------------HHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHH----------HhcCCEec
Confidence 0 11 1356678899999999999999999999999999 88999999
Q ss_pred ccccccccccceEEEecCCCceeecceEEEEEEEcCc-ccCCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCCccch
Q 002671 405 TSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGT-AYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIEL 483 (894)
Q Consensus 405 ~~~~~e~Lg~v~~I~~DKTGTLT~n~m~~~~~~i~~~-~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (894)
+++++|+||.+++||+|||||||+|+|+|.++++++. .|....... +...+..+ ....+. .
T Consensus 349 ~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~--------~~~~~~g~-----~~~~~~---~-- 410 (1053)
T TIGR01523 349 KLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDD--------AFNPNEGN-----VSGIPR---F-- 410 (1053)
T ss_pred cchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCC--------CCCCcccc-----cccccc---c--
Confidence 9999999999999999999999999999999998652 221100000 00000000 000000 0
Q ss_pred hhhcccCCCCccccccCCCccccccccccCC-CCCCChhHHHHHHHHHhhcceeeecccCCCCCeeeecCChhHHHHHHH
Q 002671 484 ETVITSNDGNDFKRRIKGFNFEDSRLMDGNW-LKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVA 562 (894)
Q Consensus 484 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~Alv~~ 562 (894)
.....+.. ....+.+.-.......... .....+..+.+++.+.++||++....++..+.. ...++|+|.||+.+
T Consensus 411 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~-~~~GdptE~ALl~~ 485 (1053)
T TIGR01523 411 SPYEYSHN----EAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCW-KAHGDPTEIAIHVF 485 (1053)
T ss_pred cccccccc----ccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCce-eeCcCccHHHHHHH
Confidence 00000000 0000000000000000000 000012346678899999999876533222211 13589999999999
Q ss_pred HHHCCcEEEEEc---------C-CeEEEEecCCCCCCCceeEEEEEEeecCCCCCceEEEEEEcCCC-cEEEEEccchhh
Q 002671 563 AREFGFEFYRRT---------Q-SSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDG-QILLLCKGADSI 631 (894)
Q Consensus 563 a~~~g~~~~~~~---------~-~~i~i~~~~~~~g~~~~~~~~il~~~~F~s~rkrmsviv~~~~g-~~~l~~KGa~~~ 631 (894)
|.+.|+...... + ....+.... .+.....|++++.+||+|+|||||++++++++ .+++|+|||||.
T Consensus 486 a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~ 562 (1053)
T TIGR01523 486 AKKFDLPHNALTGEEDLLKSNENDQSSLSQHN---EKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFER 562 (1053)
T ss_pred HHHcCCCcccccchhhhhhhcccccccccccc---ccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHH
Confidence 999997531000 0 000000000 00013568999999999999999999997654 589999999999
Q ss_pred hhHhhccC-----------ccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhCHHHHHHHHH
Q 002671 632 IFDRLSKN-----------GRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVS 700 (894)
Q Consensus 632 i~~~~~~~-----------~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~ 700 (894)
|+++|+.. +++.++.+.+++++|+.+|+|||++|||.++.+++..+ .+.. .. .+|
T Consensus 563 il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~--~~~~---~~-~~~-------- 628 (1053)
T TIGR01523 563 IIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDD--QLKN---ET-LNR-------- 628 (1053)
T ss_pred HHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccch--hhhc---cc-cch--------
Confidence 99999742 12235678888999999999999999999987654322 1100 00 112
Q ss_pred HhhhcccEEEEeeeecccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHH
Q 002671 701 DMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAK 780 (894)
Q Consensus 701 ~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~ 780 (894)
+.+|+||+|+|+++++|++|++++++|+.|+++||+|||+|||++.||.+||++|||++++.. . ...
T Consensus 629 ~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~--~-~~~---------- 695 (1053)
T TIGR01523 629 ATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFI--H-DRD---------- 695 (1053)
T ss_pred hhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcccc--c-ccc----------
Confidence 357899999999999999999999999999999999999999999999999999999864311 0 000
Q ss_pred HHHHHhHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcchHHHHHHHHHhhccCeEEEEeCCchhHHHHHHHHhhcC
Q 002671 781 EAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGT 860 (894)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~~P~qK~~iv~~lk~~~ 860 (894)
......+++|..+..+.++++.+. .. ...||||++|+||..+|+.+|+ .
T Consensus 696 ------------------------~~~~~~vitG~~l~~l~~~~l~~~----~~--~~~V~ar~sP~~K~~iV~~lq~-~ 744 (1053)
T TIGR01523 696 ------------------------EIMDSMVMTGSQFDALSDEEVDDL----KA--LCLVIARCAPQTKVKMIEALHR-R 744 (1053)
T ss_pred ------------------------ccccceeeehHHhhhcCHHHHHHH----hh--cCeEEEecCHHHHHHHHHHHHh-c
Confidence 001136999999987765554432 22 3459999999999999999998 7
Q ss_pred CCEEEEEcCChhcHHHHHhCCccEEec--Cccc
Q 002671 861 GKTTLAIGDGANDVGMIQEADIGIGIS--GVEG 891 (894)
Q Consensus 861 ~~~v~~iGDG~ND~~ml~~AdvGI~i~--g~eg 891 (894)
|++|+|+|||+||+|||++|||||||+ |+|+
T Consensus 745 g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~v 777 (1053)
T TIGR01523 745 KAFCAMTGDGVNDSPSLKMANVGIAMGINGSDV 777 (1053)
T ss_pred CCeeEEeCCCcchHHHHHhCCccEecCCCccHH
Confidence 999999999999999999999999984 5554
No 8
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-91 Score=779.38 Aligned_cols=653 Identities=23% Similarity=0.294 Sum_probs=491.4
Q ss_pred ccccCCCCCCCCeeecCCcchhhhhHHHHHHHhhhHHHHHHHHHHHHhcccCCCCCCchhhhhHHHHHHHHHHHHHHHHH
Q 002671 46 MHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDW 125 (894)
Q Consensus 46 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~d~ 125 (894)
+...|++.||.|++....-..++ +.+++||.++...++|+++++|+.. .++.-.+.+.+++++++...++++|
T Consensus 28 ev~~r~~~yG~Nel~~ee~~~~w---k~vLeQF~n~Li~iLL~sA~ISfvl----~~~~e~~vI~liiv~nvtVG~~QEy 100 (972)
T KOG0202|consen 28 EVTRRRKKYGENELPAEEGESLW---KLVLEQFDNPLILILLLSAAISFVL----ADFDEPFVITLIIVINVTVGFVQEY 100 (972)
T ss_pred HHHHHHHhcCCccCccccCCcHH---HHHHHHHHhHHHHHHHHHHHHHHHH----Hhcccceeeeeeeeeeeeeeeeeeh
Confidence 34557889999999976544433 9999999999999999999999985 2222233333455566677789999
Q ss_pred HHhhchhhhcc---ceEEEEeCCCeEEEeeccccccCcEEEeecCcccCceEEEeeecCCCCcEEEEecccCCCCcceee
Q 002671 126 RRFMQDKEVNA---RKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVK 202 (894)
Q Consensus 126 ~r~k~~~~~n~---~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~~~~K 202 (894)
+..|+.+++++ ..++|+ |+|+.+.+++++|+|||||.|+-||.||||++|++..+ ..||||+|||||.|+.|
T Consensus 101 ~aEkalEaLk~l~p~~~~V~-R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~~s----l~iDeS~LTGEs~pv~K 175 (972)
T KOG0202|consen 101 NAEKALEALKELVPPMAHVL-RSGKLQHILARELVPGDIVELKVGDKIPADLRLIEAKS----LRIDESSLTGESEPVSK 175 (972)
T ss_pred hhHHHHHHHHhcCCccceEE-ecCcccceehhccCCCCEEEEecCCccccceeEEeeee----eeeecccccCCcccccc
Confidence 99998877765 789999 89999999999999999999999999999999999876 88999999999999999
Q ss_pred cccccCCCCCchhhhccceeEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEecccchhhh
Q 002671 203 RAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQ 282 (894)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~g~Vv~tG~~Tk~~~ 282 (894)
........ +. ++..+.....|+||.+..|+ +.|+|+.||.+|.++.
T Consensus 176 ~t~~v~~~--~~-----------~~~~dk~NiaFsGT~V~~G~---------------------a~GIVi~TG~nTeiG~ 221 (972)
T KOG0202|consen 176 DTDAVPKD--EN-----------ADVQDKKNIAFSGTLVVAGR---------------------AKGIVIGTGLNTEIGK 221 (972)
T ss_pred cCccccCC--CC-----------CccccceeeEeecceeecCc---------------------eeEEEEeccccchHHH
Confidence 76543310 00 01112233557777777777 9999999999997654
Q ss_pred cc---CCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhccccCCCccccCCCCCccccCCCCCchhHHHHHHH
Q 002671 283 NA---TTSPSKRSGIEKKMDKIIFILFAILVLISLISSIG-FAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVT 358 (894)
Q Consensus 283 ~~---~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~-~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~ 358 (894)
.. ...+..++|+|++++.+...+.-+..++|+...++ .+.++.-.....|+ ...+..|..
T Consensus 222 I~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~f----------------k~~~~~f~I 285 (972)
T KOG0202|consen 222 IFKMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWF----------------KGALYYFKI 285 (972)
T ss_pred HHHHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccch----------------hchhhhhhH
Confidence 33 23456689999999999999985555556555544 22222111111333 233567888
Q ss_pred HHHHhhccccchhhHHHHHHHHHHHHHHhccccccccCCCCCeEEeccccccccccceEEEecCCCceeecceEEEEEEE
Q 002671 359 ALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSV 438 (894)
Q Consensus 359 ~i~ll~~~iP~sL~v~l~i~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~e~Lg~v~~I~~DKTGTLT~n~m~~~~~~i 438 (894)
++.+.+.+||.+||+.+++...++..+| ++++++||.+...|.||.+++||||||||||+|+|.+.++++
T Consensus 286 aVsLAVAAIPEGLPaVvT~tLALG~~rM----------akknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~ 355 (972)
T KOG0202|consen 286 AVSLAVAAIPEGLPAVVTTTLALGTRRM----------AKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFI 355 (972)
T ss_pred HHHHHHHhccCCCcchhhhhHHHhHHHH----------HhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEe
Confidence 9999999999999999999999999999 999999999999999999999999999999999999999998
Q ss_pred cCcccCCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCCccchhhhcccCCCCccccccCCCccccccccccCCCCCC
Q 002671 439 AGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEP 518 (894)
Q Consensus 439 ~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (894)
.+..++.. ++ +.... ......+-.+.+.. .......
T Consensus 356 ~~~~~~~~-~~-------------------------------f~~tg---------~ty~~~g~v~~~~~---~~~~~~~ 391 (972)
T KOG0202|consen 356 PDGGTATV-DE-------------------------------FNPTG---------TTYSPEGEVFKDGL---YEKDKAG 391 (972)
T ss_pred cccccccc-cc-------------------------------cccCC---------ceeCCCCceEecCc---ccccccc
Confidence 76654332 10 00000 00000000011000 0111233
Q ss_pred ChhHHHHHHHHHhhcceeeecccCCCCCeeeecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEE
Q 002671 519 NVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKIL 598 (894)
Q Consensus 519 ~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~i~i~~~~~~~g~~~~~~~~il 598 (894)
..+.++++..+.++||.+...+++. +.++ ..+.|.|.||..+|.++|+.-...+..+ -.+ ...+.+.....++..
T Consensus 392 ~~~~l~~l~~i~~lCNda~v~~~~~-~~~~-~~G~pTE~AL~vlaeKm~l~~~~~~~~s--~~~-~~~c~~~~~~~~~~~ 466 (972)
T KOG0202|consen 392 DNDLLQELAEICALCNDATVEYNDA-DCYE-KVGEPTEGALIVLAEKMGLPGTRSTNLS--NEE-ASACNRVYSRLFKKI 466 (972)
T ss_pred ccHHHHHHHHHHHhhhhhhhhcCch-hhHH-hcCCchHHHHHHHHHHcCCCcchhhccc--ccc-cccchhHHHHhhhhe
Confidence 5567889999999999998776653 2111 1489999999999999998643311100 001 112223334566777
Q ss_pred EeecCCCCCceEEEEEEcCCCc--EEEEEccchhhhhHhhccC-----------ccccHHHHHHHHHHHHhcCCeEEEEE
Q 002671 599 NLLDFTSKRKRMSVIVRDEDGQ--ILLLCKGADSIIFDRLSKN-----------GRMYEEATTKLLNEYGEAGLRTLALA 665 (894)
Q Consensus 599 ~~~~F~s~rkrmsviv~~~~g~--~~l~~KGa~~~i~~~~~~~-----------~~~~~~~~~~~l~~~~~~Glr~l~~A 665 (894)
..+||+|+||+|||.+.++.+. +.+|+|||+|.|+++|+.. .+..++.+.+...+|+.+|||+|++|
T Consensus 467 ~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA 546 (972)
T KOG0202|consen 467 AELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALA 546 (972)
T ss_pred eEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEE
Confidence 9999999999999999986664 8999999999999999541 12357888999999999999999999
Q ss_pred EEeCCH---HHHHHHHHHHHHHHhhhhhCHHHHHHHHHHhhhcccEEEEeeeecccccCChHHHHHHHHHcCCeEEEEcC
Q 002671 666 YKQLDE---SEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTG 742 (894)
Q Consensus 666 ~k~l~~---~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~~lTG 742 (894)
+++... ++-..|.. .+| ...|.||+|+|++|+.||+|++|+++|+.|+++||+|.|+||
T Consensus 547 ~~~~~~~~~~~~~l~~~----------s~~--------~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITG 608 (972)
T KOG0202|consen 547 SKDSPGQVPDDQDLNDT----------SNR--------ATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITG 608 (972)
T ss_pred ccCCcccChhhhhhccc----------ccc--------cccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcC
Confidence 997663 11111110 122 577899999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcc
Q 002671 743 DKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALE 822 (894)
Q Consensus 743 D~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~ 822 (894)
|+.+||.+||+++||...+.+ -..-+++|..++.+.+
T Consensus 609 D~~~TA~AI~r~iGi~~~~ed-------------------------------------------~~~~~~TG~efD~ls~ 645 (972)
T KOG0202|consen 609 DNKETAEAIAREIGIFSEDED-------------------------------------------VSSMALTGSEFDDLSD 645 (972)
T ss_pred CCHHHHHHHHHHhCCCcCCcc-------------------------------------------ccccccchhhhhcCCH
Confidence 999999999999999865432 0112677888887665
Q ss_pred hHHHHHHHHHhhccCeEEEEeCCchhHHHHHHHHhhcCCCEEEEEcCChhcHHHHHhCCccEEec
Q 002671 823 DDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS 887 (894)
Q Consensus 823 ~~~~~~~~~~~~~~~~vv~~r~~P~qK~~iv~~lk~~~~~~v~~iGDG~ND~~ml~~AdvGI~i~ 887 (894)
+++.+... ...+|+|++|++|.++|+.||+ .|.+|+|+|||.||+|+||.|||||||+
T Consensus 646 ~~~~~~~~------~~~vFaR~~P~HK~kIVeaLq~-~geivAMTGDGVNDApALK~AdIGIAMG 703 (972)
T KOG0202|consen 646 EELDDAVR------RVLVFARAEPQHKLKIVEALQS-RGEVVAMTGDGVNDAPALKKADIGIAMG 703 (972)
T ss_pred HHHHHHhh------cceEEEecCchhHHHHHHHHHh-cCCEEEecCCCccchhhhhhcccceeec
Confidence 55543332 3459999999999999999998 8999999999999999999999999993
No 9
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=1.1e-89 Score=849.71 Aligned_cols=643 Identities=21% Similarity=0.255 Sum_probs=493.6
Q ss_pred ccccCCCCCCCCeeecCCcchhhhhHHHHHHHhhhHHHHHHHHHHHHhcccCC----------CCCCchhhhhHHHHHHH
Q 002671 46 MHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLS----------PFSPVSMLLPLAIVVGV 115 (894)
Q Consensus 46 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~~~----------~~~~~~~~~~l~~v~~~ 115 (894)
+...|+.+||+|.++.++...++ +.|++||..++++.++++++++++... ...|+ ..+++++++++
T Consensus 41 e~~~rl~~~G~N~l~~~~~~~~~---~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~~~~~~~~~-~~~~i~~vv~i 116 (997)
T TIGR01106 41 RAAEILARDGPNALTPPPTTPEW---VKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLY-LGVVLSAVVII 116 (997)
T ss_pred HHHHHHHHhCCCCCCCCCCCCHH---HHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCCCcccccHH-HHHHHHHHHHH
Confidence 34567889999999887665443 889999999999999999999775311 12333 34467788889
Q ss_pred HHHHHHHHHHHHhhchhhhcc---ceEEEEeCCCeEEEeeccccccCcEEEeecCcccCceEEEeeecCCCCcEEEEecc
Q 002671 116 SMAKEALEDWRRFMQDKEVNA---RKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMN 192 (894)
Q Consensus 116 ~~~~~~~~d~~r~k~~~~~n~---~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~ 192 (894)
+++..+++++++++.++.+++ .+++|+ |||++++|++++|+|||||.|++||.|||||+|+++++ +.||||+
T Consensus 117 ~~~i~~~qe~ka~~~l~~l~~~~~~~~~Vi-Rdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~----l~VdeS~ 191 (997)
T TIGR01106 117 TGCFSYYQEAKSSKIMESFKNMVPQQALVI-RDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG----CKVDNSS 191 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCeeEEE-ECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC----cEEEccc
Confidence 999999999999999887775 589999 89999999999999999999999999999999999543 8999999
Q ss_pred cCCCCcceeecccccCCCCCchhhhccceeEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEE
Q 002671 193 LDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVI 272 (894)
Q Consensus 193 LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~g~Vv 272 (894)
|||||.|+.|.+.+.. ..|++..|++++||.+. .|++.|+|+
T Consensus 192 LTGES~pv~K~~~~~~-------------------------------------~~~~~~~n~l~~Gt~v~-~G~~~~~V~ 233 (997)
T TIGR01106 192 LTGESEPQTRSPEFTH-------------------------------------ENPLETRNIAFFSTNCV-EGTARGIVV 233 (997)
T ss_pred cCCCCCceeccCCCcc-------------------------------------cCccccCCeEEeccEee-eeeEEEEEE
Confidence 9999999999875311 01334455666666555 355999999
Q ss_pred EecccchhhhccC---CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCCCc
Q 002671 273 FTGHDSKVMQNAT---TSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPL 349 (894)
Q Consensus 273 ~tG~~Tk~~~~~~---~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~ 349 (894)
+||.+|++++... ..+.+++++++.++++..++..+.++++++.++++.+... .|
T Consensus 234 ~tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~----------------- 291 (997)
T TIGR01106 234 NTGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILGY-----TW----------------- 291 (997)
T ss_pred EccccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CH-----------------
Confidence 9999998877665 4566789999999999999988888777776665433211 12
Q ss_pred hhHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhccccccccCCCCCeEEeccccccccccceEEEecCCCceeec
Q 002671 350 VPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCN 429 (894)
Q Consensus 350 ~~~~~~~~~~i~ll~~~iP~sL~v~l~i~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~e~Lg~v~~I~~DKTGTLT~n 429 (894)
...+.+++.+++.+||++|+++++++...++.+| +++++++|+++++|+||++++||||||||||+|
T Consensus 292 ---~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m----------~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n 358 (997)
T TIGR01106 292 ---LEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQN 358 (997)
T ss_pred ---HHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHH----------HHCCcEecCcHHHHHhcCCCEEEECCCCceecC
Confidence 2456677888889999999999999999999988 788999999999999999999999999999999
Q ss_pred ceEEEEEEEcCcccCCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCCccchhhhcccCCCCccccccCCCccccccc
Q 002671 430 QMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRL 509 (894)
Q Consensus 430 ~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 509 (894)
+|+|.++++++..|..+..+. ..+..
T Consensus 359 ~m~v~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~------ 384 (997)
T TIGR01106 359 RMTVAHMWFDNQIHEADTTED------------------------------------------------QSGVS------ 384 (997)
T ss_pred ceEEEEEEECCeEEecCCccC------------------------------------------------CCCcc------
Confidence 999999998877653321000 00000
Q ss_pred cccCCCCCCChhHHHHHHHHHhhcceeeecccCCC--CCeeeecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCC
Q 002671 510 MDGNWLKEPNVDTLLLFFRILAICHTAIPELNEET--GNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPK 587 (894)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~--~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~i~i~~~~~~~ 587 (894)
........+.++.++++||++....+... -.-.+..++|+|.||++++...+.....
T Consensus 385 ------~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~--------------- 443 (997)
T TIGR01106 385 ------FDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVME--------------- 443 (997)
T ss_pred ------CCcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHH---------------
Confidence 00112344578889999998876532211 0012456899999999999865432110
Q ss_pred CCCceeEEEEEEeecCCCCCceEEEEEEcC---CCcEEEEEccchhhhhHhhcc---Cc------cccHHHHHHHHHHHH
Q 002671 588 GQPVEREFKILNLLDFTSKRKRMSVIVRDE---DGQILLLCKGADSIIFDRLSK---NG------RMYEEATTKLLNEYG 655 (894)
Q Consensus 588 g~~~~~~~~il~~~~F~s~rkrmsviv~~~---~g~~~l~~KGa~~~i~~~~~~---~~------~~~~~~~~~~l~~~~ 655 (894)
.+..|+.++.+||+|+||||+++++.. ++.+++|+|||||.|+++|+. ++ ++.++.+.+++++|+
T Consensus 444 ---~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a 520 (997)
T TIGR01106 444 ---MRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELG 520 (997)
T ss_pred ---HHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHH
Confidence 135688899999999999999988642 356899999999999999974 11 224566888899999
Q ss_pred hcCCeEEEEEEEeCCHHHHHH-HHHHHHHHHhhhhhCHHHHHHHHHHhhhcccEEEEeeeecccccCChHHHHHHHHHcC
Q 002671 656 EAGLRTLALAYKQLDESEYSA-WNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAG 734 (894)
Q Consensus 656 ~~Glr~l~~A~k~l~~~e~~~-~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aG 734 (894)
++|+|||++|||.++.+++.. |.. +++ ..+.+|+||+|+|+++++||+|++++++|++|+++|
T Consensus 521 ~~GlRvla~A~k~l~~~~~~~~~~~-----------~~~-----~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~G 584 (997)
T TIGR01106 521 GLGERVLGFCHLYLPDEQFPEGFQF-----------DTD-----DVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAG 584 (997)
T ss_pred hcCCEEEEEEEeecCcccccccccc-----------cch-----hhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCC
Confidence 999999999999998765432 211 110 013448999999999999999999999999999999
Q ss_pred CeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhhhhhhccCCCCCceEEEEeC
Q 002671 735 LKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEG 814 (894)
Q Consensus 735 Ikv~~lTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G 814 (894)
|+|+|+|||++.||.++|+++|++.++.... ++. ...+....+.. +......++++|
T Consensus 585 i~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~-------~~i------------~~~~~~~~~~~----~~~~~~~~vi~G 641 (997)
T TIGR01106 585 IKVIMVTGDHPITAKAIAKGVGIISEGNETV-------EDI------------AARLNIPVSQV----NPRDAKACVVHG 641 (997)
T ss_pred CeEEEECCCCHHHHHHHHHHcCCCCCCccch-------hhh------------hhhcccccccc----ccccccceEEEh
Confidence 9999999999999999999999997653310 000 00000000000 011223479999
Q ss_pred chhhhhcchHHHHHHHHHhhccCeEEEEeCCchhHHHHHHHHhhcCCCEEEEEcCChhcHHHHHhCCccEEec--Ccccc
Q 002671 815 KTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS--GVEGC 892 (894)
Q Consensus 815 ~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~~P~qK~~iv~~lk~~~~~~v~~iGDG~ND~~ml~~AdvGI~i~--g~eg~ 892 (894)
.+|+.+.+++ +.++...+..+||||++|+||..+|+.+|+ .|++|+|+|||+||+|||++|||||||+ |+|+.
T Consensus 642 ~~l~~l~~~e----l~~~~~~~~~~VfaR~sPeqK~~IV~~lq~-~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~va 716 (997)
T TIGR01106 642 SDLKDMTSEQ----LDEILKYHTEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVS 716 (997)
T ss_pred HHhhhCCHHH----HHHHHHhcCCEEEEECCHHHHHHHHHHHHH-CCCEEEEECCCcccHHHHhhCCcceecCCcccHHH
Confidence 9999876654 445555667789999999999999999998 8999999999999999999999999984 66654
No 10
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=1.4e-88 Score=838.12 Aligned_cols=608 Identities=21% Similarity=0.290 Sum_probs=463.7
Q ss_pred ccccCCCCCCCCeeecCCcchhhhhHHHHHHHhhhHHHHHHHHHHHHhccc--CCC--------CCCchhhhh---HHHH
Q 002671 46 MHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP--LSP--------FSPVSMLLP---LAIV 112 (894)
Q Consensus 46 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~--~~~--------~~~~~~~~~---l~~v 112 (894)
+...|+.+||+|.++.++...|. +.+++||+.+++++|+++++++++. ..+ ..|+..++. ++++
T Consensus 65 ev~~r~~~yG~N~l~~~~~~s~~---~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~ 141 (941)
T TIGR01517 65 TLERREKVYGKNELPEKPPKSFL---QIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILV 141 (941)
T ss_pred HHHHHHHHhCCCCCCCCCCCCHH---HHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHH
Confidence 45668889999999998875543 7899999999999999999999873 111 145554433 3333
Q ss_pred HHHHHHHHHHHHHHHhhchhhhccceEEEEeCCCeEEEeeccccccCcEEEeecCcccCceEEEeeecCCCCcEEEEecc
Q 002671 113 VGVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMN 192 (894)
Q Consensus 113 ~~~~~~~~~~~d~~r~k~~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~ 192 (894)
++++++.++.++++.++.++..++.+++|+ |||++++|++++|+|||||.|++||.|||||+|++++ .+.||||+
T Consensus 142 ~~i~~~~e~~~~~~~~~l~~~~~~~~~~Vi-RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~----~l~VdES~ 216 (941)
T TIGR01517 142 VLVTAVNDYKKELQFRQLNREKSAQKIAVI-RGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGL----SLEIDESS 216 (941)
T ss_pred hHHHHHHHHHHHHHHHHHHhccCCCceEEE-ECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcC----cEEEEecc
Confidence 444455555555555554444456789999 8999999999999999999999999999999999942 59999999
Q ss_pred cCCCCcceeecccccCCCCCchhhhccceeEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEE
Q 002671 193 LDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVI 272 (894)
Q Consensus 193 LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~g~Vv 272 (894)
|||||.|+.|.+++.. ..|+||.+.+|. +.++|+
T Consensus 217 LTGES~pv~K~~~~~n-------------------------~v~~GT~v~~G~---------------------~~~iV~ 250 (941)
T TIGR01517 217 ITGESDPIKKGAPKDS-------------------------FLLSGTVVNEGS---------------------GRMLVT 250 (941)
T ss_pred cCCCCCcccccCCCCc-------------------------eEEeCCeEEeeE---------------------EEEEEE
Confidence 9999999999864321 347777777776 999999
Q ss_pred Eecccchhhh---ccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-cccCCCccccCCCCCccccCCCCC
Q 002671 273 FTGHDSKVMQ---NATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKI-NYQTPQWWYLKPKETDVYFNPGKP 348 (894)
Q Consensus 273 ~tG~~Tk~~~---~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~-~~~~~~~~yl~~~~~~~~~~~~~~ 348 (894)
+||.+|.+++ +....+ +++++++.++++..++..+.++++++.++++.+.. ... .|. +.. .+...
T Consensus 251 ~tG~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~---~~~---~~~----~~~~~ 319 (941)
T TIGR01517 251 AVGVNSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRI---IRG---DGR----DTEED 319 (941)
T ss_pred EeCCCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---ccc---ccc----ccchh
Confidence 9999996544 444444 45799999999999998888777777666553311 000 000 000 00000
Q ss_pred chhHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhccccccccCCCCCeEEeccccccccccceEEEecCCCceee
Q 002671 349 LVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTC 428 (894)
Q Consensus 349 ~~~~~~~~~~~i~ll~~~iP~sL~v~l~i~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~e~Lg~v~~I~~DKTGTLT~ 428 (894)
.......|.+++.+++.+|||+|+++++++...++.++ +++++++|+++++|+||++++||||||||||+
T Consensus 320 ~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~m----------ak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~ 389 (941)
T TIGR01517 320 AQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKM----------MKDNNLVRHLAACETMGSATAICSDKTGTLTQ 389 (941)
T ss_pred hHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHH----------HhCCCEEechHHhhhccCceEEEEcCcCceee
Confidence 12334578889999999999999999999999999888 88999999999999999999999999999999
Q ss_pred cceEEEEEEEcCcccCCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCCccchhhhcccCCCCccccccCCCcccccc
Q 002671 429 NQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSR 508 (894)
Q Consensus 429 n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 508 (894)
|+|+|.+++.++..|.....
T Consensus 390 n~m~v~~~~~~~~~~~~~~~------------------------------------------------------------ 409 (941)
T TIGR01517 390 NVMSVVQGYIGEQRFNVRDV------------------------------------------------------------ 409 (941)
T ss_pred ceEEEEEEEEecceEecCcc------------------------------------------------------------
Confidence 99999999876543321100
Q ss_pred ccccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCCeeeecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCC
Q 002671 509 LMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKG 588 (894)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~i~i~~~~~~~g 588 (894)
.. . .+....+++...+.||+..+...++. ...+..++|+|.||+++++..|.....
T Consensus 410 -~~-----~-~~~~~~~~l~~~~~~~s~~~~~~~~~-~~~~~~g~p~e~All~~~~~~~~~~~~---------------- 465 (941)
T TIGR01517 410 -LR-----N-VPKHVRNILVEGISLNSSSEEVVDRG-GKRAFIGSKTECALLGFLLLLGRDYQE---------------- 465 (941)
T ss_pred -cc-----c-CCHHHHHHHHHHHHhCCCCccccCCC-CccccCCCccHHHHHHHHHHcCCCHHH----------------
Confidence 00 0 01123344555555555544321111 113456899999999999987743211
Q ss_pred CCceeEEEEEEeecCCCCCceEEEEEEcCCCcEEEEEccchhhhhHhhccC----cc-----ccHHHHHHHHHHHHhcCC
Q 002671 589 QPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKN----GR-----MYEEATTKLLNEYGEAGL 659 (894)
Q Consensus 589 ~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~~~~----~~-----~~~~~~~~~l~~~~~~Gl 659 (894)
....|++++.+||+|+||||+++++.+++++++|+|||||.|+++|+.. +. +.++.+.+.+++|+.+|+
T Consensus 466 --~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~ 543 (941)
T TIGR01517 466 --VRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRCADVIEPLASDAL 543 (941)
T ss_pred --HHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCC
Confidence 1235778889999999999999999877889999999999999999751 11 124567888899999999
Q ss_pred eEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhCHHHHHHHHHHhhhcccEEEEeeeecccccCChHHHHHHHHHcCCeEEE
Q 002671 660 RTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWV 739 (894)
Q Consensus 660 r~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~~ 739 (894)
|++++|||+++.+++..| +..|+||+|+|+++++|++|++++++|+.|+++||++||
T Consensus 544 Rvl~~A~~~~~~~~~~~~-----------------------~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~m 600 (941)
T TIGR01517 544 RTICLAYRDFAPEEFPRK-----------------------DYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRM 600 (941)
T ss_pred EEEEEEEEecCccccccc-----------------------cccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEE
Confidence 999999999876543222 234789999999999999999999999999999999999
Q ss_pred EcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhhhhhhccCCCCCceEEEEeCchhhh
Q 002671 740 LTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAY 819 (894)
Q Consensus 740 lTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~ 819 (894)
+|||++.||.+||++|||.+++. .+++|+.+..
T Consensus 601 iTGD~~~tA~~iA~~~GI~~~~~-----------------------------------------------~vi~G~~~~~ 633 (941)
T TIGR01517 601 VTGDNIDTAKAIARNCGILTFGG-----------------------------------------------LAMEGKEFRR 633 (941)
T ss_pred ECCCChHHHHHHHHHcCCCCCCc-----------------------------------------------eEeeHHHhhh
Confidence 99999999999999999986432 2778888776
Q ss_pred hcchHHHHHHHHHhhccCeEEEEeCCchhHHHHHHHHhhcCCCEEEEEcCChhcHHHHHhCCccEEec--Cccc
Q 002671 820 ALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS--GVEG 891 (894)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~vv~~r~~P~qK~~iv~~lk~~~~~~v~~iGDG~ND~~ml~~AdvGI~i~--g~eg 891 (894)
..++++...+ . +..||||++|+||.++|+.+|+ .|++|+|+|||+||+|||++|||||||+ |+|+
T Consensus 634 l~~~el~~~i----~--~~~Vfar~sPe~K~~iV~~lq~-~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdv 700 (941)
T TIGR01517 634 LVYEEMDPIL----P--KLRVLARSSPLDKQLLVLMLKD-MGEVVAVTGDGTNDAPALKLADVGFSMGISGTEV 700 (941)
T ss_pred CCHHHHHHHh----c--cCeEEEECCHHHHHHHHHHHHH-CCCEEEEECCCCchHHHHHhCCcceecCCCccHH
Confidence 6554444332 2 3459999999999999999998 8999999999999999999999999994 5554
No 11
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-88 Score=757.26 Aligned_cols=621 Identities=22% Similarity=0.313 Sum_probs=486.3
Q ss_pred cccCCCCCCCCeeecCCcchhhhhHHHHHHHhhhHHHHHHHHHHHHhccc-C----CCCCCchhhhhHHHHHHHHHHHHH
Q 002671 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP-L----SPFSPVSMLLPLAIVVGVSMAKEA 121 (894)
Q Consensus 47 ~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~-~----~~~~~~~~~~~l~~v~~~~~~~~~ 121 (894)
...|+.-||.|.++..+...|. .++|+.|+...-+++++++++++.. + .+.+|+....+++.|+ +..+..+
T Consensus 125 l~~Rr~~fG~N~~p~k~~K~Fl---~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~-~VV~VtA 200 (1034)
T KOG0204|consen 125 LERRRKIFGSNTYPEKPPKGFL---RFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVI-LVVLVTA 200 (1034)
T ss_pred HHHHHHhcCCCCCCCCCCccHH---HHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEE-EEEEEee
Confidence 3457788999999998876554 7899999999999999999999864 2 2346777666554432 2223455
Q ss_pred HHHHHHhhchhhh----ccceEEEEeCCCeEEEeeccccccCcEEEeecCcccCceEEEeeecCCCCcEEEEecccCCCC
Q 002671 122 LEDWRRFMQDKEV----NARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGET 197 (894)
Q Consensus 122 ~~d~~r~k~~~~~----n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs 197 (894)
+.||++.++.+.+ .+.++.|+ |||+.++|+..||+||||+.|+.||.+||||+++++.+ +.||||+|||||
T Consensus 201 ~nDy~qe~QF~~L~~~k~~~k~~Vi-R~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~----L~iDESSlTGES 275 (1034)
T KOG0204|consen 201 VNDYRQELQFRKLQKEKRNIKFQVI-RGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNS----LKIDESSLTGES 275 (1034)
T ss_pred cchhHHhhhhhhhhhhhhceEEEEE-ECCEEEEEEEeeeeeccEEEeecCCccccceEEEeccc----eeEecccccCCC
Confidence 6677776665555 45789999 89999999999999999999999999999999999765 899999999999
Q ss_pred cceeecccccCCCCCchhhhccceeEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEeccc
Q 002671 198 NLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHD 277 (894)
Q Consensus 198 ~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~g~Vv~tG~~ 277 (894)
+++.|.+.... +.++||.+++|. +.++|+.+|.+
T Consensus 276 d~v~k~~~~dP-------------------------fLlSGTkv~eGs---------------------gkMlVTaVGmn 309 (1034)
T KOG0204|consen 276 DHVQKSLDKDP-------------------------FLLSGTKVMEGS---------------------GKMLVTAVGMN 309 (1034)
T ss_pred cceeccCCCCC-------------------------eEeecceeecCc---------------------ceEEEEEeeec
Confidence 99999764333 678999999888 99999999999
Q ss_pred chh---hhccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCCCchhHHH
Q 002671 278 SKV---MQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLA 354 (894)
Q Consensus 278 Tk~---~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 354 (894)
|.. |.........+||+|-++++++..+..+.++++++.+++..+..-... .+--.. ............++.
T Consensus 310 t~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~--~~~~~~---~~~~~~~~~~~~~v~ 384 (1034)
T KOG0204|consen 310 TQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGK--TKIEGG---TGTTWSDEYIQEFVK 384 (1034)
T ss_pred chHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhee--eecCCC---CCccccHHHHHHHHH
Confidence 965 444455666789999999999999999888888888777655321110 000000 000001112334455
Q ss_pred HHHHHHHHhhccccchhhHHHHHHHHHHHHHHhccccccccCCCCCeEEeccccccccccceEEEecCCCceeecceEEE
Q 002671 355 HLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFL 434 (894)
Q Consensus 355 ~~~~~i~ll~~~iP~sL~v~l~i~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~e~Lg~v~~I~~DKTGTLT~n~m~~~ 434 (894)
.|..++.++++++|++||+++++...+++++|.+| +.++|.+.++|++|....||+|||||||.|.|++.
T Consensus 385 ~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD----------~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV 454 (1034)
T KOG0204|consen 385 FFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKD----------NNLVRHLDACETMGSATAICSDKTGTLTTNRMTVV 454 (1034)
T ss_pred HhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcc----------hhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEE
Confidence 67778888999999999999999999999999544 45799999999999999999999999999999999
Q ss_pred EEEEcCcccCCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCCccchhhhcccCCCCccccccCCCccccccccccCC
Q 002671 435 KCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNW 514 (894)
Q Consensus 435 ~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (894)
+.++++..|...... .
T Consensus 455 ~~~~~~~~~k~~~~~-~--------------------------------------------------------------- 470 (1034)
T KOG0204|consen 455 QSYIGSEHYKVNSPK-S--------------------------------------------------------------- 470 (1034)
T ss_pred eeeeccccccccCcc-c---------------------------------------------------------------
Confidence 999988876532110 0
Q ss_pred CCCCChhHHHHHHHHHhhcceeeecccCCCCCeeeecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeE
Q 002671 515 LKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVERE 594 (894)
Q Consensus 515 ~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~i~i~~~~~~~g~~~~~~ 594 (894)
..-.+.....++.+++...+.....++..+...-+.+||.|.||+.|+..+|.+|.. .+.+
T Consensus 471 -~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~------------------~R~e 531 (1034)
T KOG0204|consen 471 -SNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQD------------------VRPE 531 (1034)
T ss_pred -ccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHh------------------hcch
Confidence 001122333455666655544433334334344557999999999999999987744 3467
Q ss_pred EEEEEeecCCCCCceEEEEEEcCCCcEEEEEccchhhhhHhhccC----------ccccHHHHHHHHHHHHhcCCeEEEE
Q 002671 595 FKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKN----------GRMYEEATTKLLNEYGEAGLRTLAL 664 (894)
Q Consensus 595 ~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~~~~----------~~~~~~~~~~~l~~~~~~Glr~l~~ 664 (894)
.++++++||+|.||||+++++.+++..++|+|||.|.|+..|+.. +++....++..++.||.+||||+|+
T Consensus 532 ~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~l 611 (1034)
T KOG0204|consen 532 EKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICL 611 (1034)
T ss_pred hheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeE
Confidence 789999999999999999999888773499999999999999761 1224457888999999999999999
Q ss_pred EEEeCCHH--HHHHHHHHHHHHHhhhhhCHHHHHHHHHHhhhcccEEEEeeeecccccCChHHHHHHHHHcCCeEEEEcC
Q 002671 665 AYKQLDES--EYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTG 742 (894)
Q Consensus 665 A~k~l~~~--e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~~lTG 742 (894)
|||+.... +..+|.. .+..+.+|+++|++||+||+|||||++|+.|+.|||+|.|+||
T Consensus 612 Ay~df~~~~~~~~~~~~--------------------~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTG 671 (1034)
T KOG0204|consen 612 AYRDFVAGPDEEPSWDN--------------------EELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTG 671 (1034)
T ss_pred EeeccccCCCCCCCccc--------------------cccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeC
Confidence 99994432 1112211 1355689999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcc
Q 002671 743 DKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALE 822 (894)
Q Consensus 743 D~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~ 822 (894)
|+..||.+||.+|||++++.. .++++|+.|..+.+
T Consensus 672 DNI~TAkAIA~eCGILt~~~d---------------------------------------------~~~lEG~eFr~~s~ 706 (1034)
T KOG0204|consen 672 DNINTAKAIARECGILTPGGD---------------------------------------------FLALEGKEFRELSQ 706 (1034)
T ss_pred CcHHHHHHHHHHcccccCCCc---------------------------------------------cceecchhhhhcCH
Confidence 999999999999999987643 24777888886666
Q ss_pred hHHHHHHHHHhhccCeEEEEeCCchhHHHHHHHHhhcCCCEEEEEcCChhcHHHHHhCCccEEe--cCcccc
Q 002671 823 DDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI--SGVEGC 892 (894)
Q Consensus 823 ~~~~~~~~~~~~~~~~vv~~r~~P~qK~~iv~~lk~~~~~~v~~iGDG~ND~~ml~~AdvGI~i--~g~eg~ 892 (894)
++..+...++. |+||.+|.+|..+|+.+++ .|++|+++|||.||+|+|++||||.|| +|+|..
T Consensus 707 ee~~~i~pkl~------VlARSSP~DK~lLVk~L~~-~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVA 771 (1034)
T KOG0204|consen 707 EERDKIWPKLR------VLARSSPNDKHLLVKGLIK-QGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVA 771 (1034)
T ss_pred HHHHhhhhhhe------eeecCCCchHHHHHHHHHh-cCcEEEEecCCCCCchhhhhcccchhccccchhhh
Confidence 66555555554 9999999999999999998 899999999999999999999999977 466643
No 12
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=9.9e-87 Score=818.52 Aligned_cols=632 Identities=24% Similarity=0.282 Sum_probs=472.1
Q ss_pred HHHHhhhHHHHHHHHHHHHhccc-CCC------CCCchhhhhHHHHHHHHHHHHHHHHHHHhhchhhhc---cceEEEEe
Q 002671 74 LFEQFNRVANIYFLIAALLSVTP-LSP------FSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDKEVN---ARKVSVHV 143 (894)
Q Consensus 74 l~~qf~~~~n~~~l~~~il~~~~-~~~------~~~~~~~~~l~~v~~~~~~~~~~~d~~r~k~~~~~n---~~~~~V~~ 143 (894)
+++||++++++++++++++++++ +.+ ..|+..++++ ++++++++...+++++..++.+.+. ..+++|+
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il-~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~Vi- 78 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVIL-LILVANAIVGVWQERNAEKAIEALKEYESEHAKVL- 78 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEE-
Confidence 47899999999999999999975 221 2455555444 6667777888999999988776665 4789999
Q ss_pred CCCeEEEeeccccccCcEEEeecCcccCceEEEeeecCCCCcEEEEecccCCCCcceeecccccCCCCCchhhhccceeE
Q 002671 144 GNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGT 223 (894)
Q Consensus 144 r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~ 223 (894)
|||++++|++++|+|||||.|++||.|||||+|+++++ +.||||+|||||.|+.|.+.....
T Consensus 79 Rdg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~----l~VdeS~LTGES~pv~K~~~~~~~-------------- 140 (917)
T TIGR01116 79 RDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKT----LRVDQSILTGESVSVNKHTESVPD-------------- 140 (917)
T ss_pred ECCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecc----eEEEcccccCCCCcccccccccCc--------------
Confidence 89999999999999999999999999999999999653 899999999999999998753210
Q ss_pred EEeeCCCCCceeEEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEecccchhhh---ccCCCCCCcchHHHHHHH
Q 002671 224 VKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQ---NATTSPSKRSGIEKKMDK 300 (894)
Q Consensus 224 i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~g~Vv~tG~~Tk~~~---~~~~~~~k~s~~~~~~~~ 300 (894)
....+.+.+|++++||.+.+ |++.|+|++||.+|++++ +....+.+++++++.+++
T Consensus 141 --------------------~~~~~~~~~n~l~~GT~v~~-G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~ 199 (917)
T TIGR01116 141 --------------------ERAVNQDKKNMLFSGTLVVA-GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDE 199 (917)
T ss_pred --------------------cccCcccccceeeeCCEEec-ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHH
Confidence 00112344567777777764 569999999999998875 455667788999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccc-cCCCccccCCCCCccccCCCCCchhHHHHHHHHHHHhhccccchhhHHHHHHH
Q 002671 301 IIFILFAILVLISLISSIGFAVKINY-QTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVK 379 (894)
Q Consensus 301 ~~~~~~~~~~~~~~i~~i~~~~~~~~-~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~l~i~~ 379 (894)
+..+++.+.++++++.++++..+... .....|+ ...+..|..++.+++.+||++||++++++.
T Consensus 200 ~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l 263 (917)
T TIGR01116 200 FGELLSKVIGLICILVWVINIGHFNDPALGGGWI----------------QGAIYYFKIAVALAVAAIPEGLPAVITTCL 263 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccchhH----------------HHHHHHHHHHHhhhhhccccccHHHHHHHH
Confidence 99999888777777766554321110 0000121 122345667788999999999999999999
Q ss_pred HHHHHHHhccccccccCCCCCeEEeccccccccccceEEEecCCCceeecceEEEEEEEcCcccCCCchHHHHHHHHhhh
Q 002671 380 FLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMA 459 (894)
Q Consensus 380 ~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~e~Lg~v~~I~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~ 459 (894)
.+++.+| +++++++|+++++|+||++++||||||||||+|+|+|.+++..+..+... ..
T Consensus 264 ~~~~~~m----------~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~-~~---------- 322 (917)
T TIGR01116 264 ALGTRKM----------AKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSL-NE---------- 322 (917)
T ss_pred HHHHHHH----------HHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccccc-ce----------
Confidence 9999999 78899999999999999999999999999999999999998765432100 00
Q ss_pred hchhhhhhhhhhcccCCCCCccchhhhcccCCCCccccccCCCccccc--cccccCCCCCCChhHHHHHHHHHhhcceee
Q 002671 460 IDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDS--RLMDGNWLKEPNVDTLLLFFRILAICHTAI 537 (894)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~lalc~~~~ 537 (894)
... .+..+... ...+..............++.++++||++.
T Consensus 323 ---------------------~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~ 365 (917)
T TIGR01116 323 ---------------------FCV----------------TGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSS 365 (917)
T ss_pred ---------------------EEe----------------cCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCe
Confidence 000 00000000 000000000112345667899999999987
Q ss_pred ecccCCCCCeeee-cCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEEEeecCCCCCceEEEEEEc
Q 002671 538 PELNEETGNLTYE-AESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRD 616 (894)
Q Consensus 538 ~~~~~~~~~~~y~-~~sp~e~Alv~~a~~~g~~~~~~~~~~i~i~~~~~~~g~~~~~~~~il~~~~F~s~rkrmsviv~~ 616 (894)
...++..+ .|. .++|+|.||++++.++|+....+....+.....+. .+.....|++++.+||+|+||||||+++.
T Consensus 366 ~~~~~~~~--~~~~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~pF~s~rK~msviv~~ 441 (917)
T TIGR01116 366 LDFNERKG--VYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGC--NSVWNDKFKKLATLEFSRDRKSMSVLCKP 441 (917)
T ss_pred eeccccCC--ceeeccChhHHHHHHHHHHcCCCchhcccccccccccch--hHHHHhhcceeeecccChhhCeEEEEEee
Confidence 65433222 232 48999999999999999877654433332221110 00013568899999999999999999996
Q ss_pred CCCcEEEEEccchhhhhHhhccC----c------cccHHHHHHHHHHHHh-cCCeEEEEEEEeCCHHHHHHHHHHHHHHH
Q 002671 617 EDGQILLLCKGADSIIFDRLSKN----G------RMYEEATTKLLNEYGE-AGLRTLALAYKQLDESEYSAWNSEFQKAK 685 (894)
Q Consensus 617 ~~g~~~l~~KGa~~~i~~~~~~~----~------~~~~~~~~~~l~~~~~-~Glr~l~~A~k~l~~~e~~~~~~~~~~a~ 685 (894)
++++++|+|||||.|+++|+.. + .+.++.+.+++++|++ +|+|||++|||.++.++.. +..
T Consensus 442 -~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~-~~~------ 513 (917)
T TIGR01116 442 -STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREE-DLL------ 513 (917)
T ss_pred -CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccc-ccc------
Confidence 4778999999999999999741 1 2245678888999999 9999999999998764321 100
Q ss_pred hhhhhCHHHHHHHHHHhhhcccEEEEeeeecccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEE
Q 002671 686 SSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQI 765 (894)
Q Consensus 686 ~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~~ 765 (894)
.+. ...+.+|+||+|+|+++++||+|++++++|+.|+++||++||+|||+.+||.++|+++|+..++....
T Consensus 514 ----~~~-----~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~ 584 (917)
T TIGR01116 514 ----SDP-----ANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVT 584 (917)
T ss_pred ----ccc-----hhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCcccc
Confidence 010 12256789999999999999999999999999999999999999999999999999999986542211
Q ss_pred EEecCCchhhHHHHHHHHHHhHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcchHHHHHHHHHhhccCeEEEEeCC
Q 002671 766 CITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVS 845 (894)
Q Consensus 766 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~~ 845 (894)
...++|..+..+.++++. ...++.+||||++
T Consensus 585 -------------------------------------------~~~~~g~~l~~~~~~~~~------~~~~~~~v~ar~~ 615 (917)
T TIGR01116 585 -------------------------------------------FKSFTGREFDEMGPAKQR------AACRSAVLFSRVE 615 (917)
T ss_pred -------------------------------------------ceeeeHHHHhhCCHHHHH------HhhhcCeEEEecC
Confidence 125666666554333222 1234567999999
Q ss_pred chhHHHHHHHHhhcCCCEEEEEcCChhcHHHHHhCCccEEe-cCccc
Q 002671 846 PKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI-SGVEG 891 (894)
Q Consensus 846 P~qK~~iv~~lk~~~~~~v~~iGDG~ND~~ml~~AdvGI~i-~g~eg 891 (894)
|+||.++|+.+|+ .|++|+|+|||.||++||++|||||+| +|+|+
T Consensus 616 P~~K~~iV~~lq~-~g~~va~iGDG~ND~~alk~AdVGia~g~g~~~ 661 (917)
T TIGR01116 616 PSHKSELVELLQE-QGEIVAMTGDGVNDAPALKKADIGIAMGSGTEV 661 (917)
T ss_pred HHHHHHHHHHHHh-cCCeEEEecCCcchHHHHHhCCeeEECCCCcHH
Confidence 9999999999997 899999999999999999999999999 44444
No 13
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=5.5e-84 Score=786.47 Aligned_cols=571 Identities=20% Similarity=0.252 Sum_probs=449.0
Q ss_pred ccccCCCCCCCCeeecCCcchhhhhHHHHHHHhhhHHHHHHHHHHHHhcccCCCCCCchhhhhHHHHHHHHHHHHHHHHH
Q 002671 46 MHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDW 125 (894)
Q Consensus 46 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~d~ 125 (894)
+...|+.+||+|.++.++.+.|+ +.|++||+.|++++++++++++++. ..|...+ .++++++++.+.++++++
T Consensus 72 ea~~r~~~~G~N~l~~~~~~s~~---~~~~~~~~~p~~~lL~~aa~ls~~~---~~~~~a~-~I~~iv~i~~~i~~~qe~ 144 (902)
T PRK10517 72 EVESAREQHGENELPAQKPLPWW---VHLWVCYRNPFNILLTILGAISYAT---EDLFAAG-VIALMVAISTLLNFIQEA 144 (902)
T ss_pred HHHHHHHhcCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHHH---ccHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 34567889999999998876543 8899999999999999999999874 4444444 455677788888899999
Q ss_pred HHhhchhhhc---cceEEEEeCC------CeEEEeeccccccCcEEEeecCcccCceEEEeeecCCCCcEEEEecccCCC
Q 002671 126 RRFMQDKEVN---ARKVSVHVGN------GVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGE 196 (894)
Q Consensus 126 ~r~k~~~~~n---~~~~~V~~r~------g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGE 196 (894)
+..++.+.+. ..+++|+ || |++++|++++|+|||||.|++||.|||||+|+++++ +.||||+||||
T Consensus 145 ra~~~~~~L~~l~~~~a~Vi-R~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~----l~VDES~LTGE 219 (902)
T PRK10517 145 RSTKAADALKAMVSNTATVL-RVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARD----LFVAQASLTGE 219 (902)
T ss_pred HHHHHHHHHHhhCCCeEEEE-ECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCc----eEEEecCcCCC
Confidence 9887755554 4789999 77 789999999999999999999999999999999443 79999999999
Q ss_pred CcceeecccccCCCCCchhhhccceeEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEecc
Q 002671 197 TNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGH 276 (894)
Q Consensus 197 s~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~g~Vv~tG~ 276 (894)
|.|+.|.+++..... ...-+.+...|+||.+.+|. +.++|+.||.
T Consensus 220 S~PV~K~~~~~~~~~--------------~~~~~~~n~vfaGT~V~~G~---------------------~~~vV~atG~ 264 (902)
T PRK10517 220 SLPVEKFATTRQPEH--------------SNPLECDTLCFMGTNVVSGT---------------------AQAVVIATGA 264 (902)
T ss_pred CCceecccccccccc--------------cCccccccceeeCceEeeee---------------------EEEEEEEecc
Confidence 999999886532000 00001112346666666665 9999999999
Q ss_pred cchhhhcc---CCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCCCchhHH
Q 002671 277 DSKVMQNA---TTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGL 353 (894)
Q Consensus 277 ~Tk~~~~~---~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 353 (894)
+|.+++.. ..+..+++++++.++++..++..+.++++.+.++++.+... .| .
T Consensus 265 ~T~~GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~~-----~~--------------------~ 319 (902)
T PRK10517 265 NTWFGQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTKG-----DW--------------------W 319 (902)
T ss_pred ccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcC-----CH--------------------H
Confidence 99775543 45566789999999999999888887777766555432211 12 2
Q ss_pred HHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhccccccccCCCCCeEEeccccccccccceEEEecCCCceeecceEE
Q 002671 354 AHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDF 433 (894)
Q Consensus 354 ~~~~~~i~ll~~~iP~sL~v~l~i~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~e~Lg~v~~I~~DKTGTLT~n~m~~ 433 (894)
..|.+++.+++.+||++||++++++...++.+| +++++++|+++++|.||++++||||||||||+|+|.+
T Consensus 320 ~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~m----------ak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V 389 (902)
T PRK10517 320 EAALFALSVAVGLTPEMLPMIVTSTLARGAVKL----------SKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVL 389 (902)
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH----------HhCCcEEecchhhhhccCCCEEEecCCCccccceEEE
Confidence 577889999999999999999999999999988 8999999999999999999999999999999999999
Q ss_pred EEEEEcCcccCCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCCccchhhhcccCCCCccccccCCCccccccccccC
Q 002671 434 LKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGN 513 (894)
Q Consensus 434 ~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 513 (894)
.++.. ..+..
T Consensus 390 ~~~~~---~~~~~------------------------------------------------------------------- 399 (902)
T PRK10517 390 ENHTD---ISGKT------------------------------------------------------------------- 399 (902)
T ss_pred EEEec---CCCCC-------------------------------------------------------------------
Confidence 87531 00000
Q ss_pred CCCCCChhHHHHHHHHHhhcceeeecccCCCCCeeeecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCcee
Q 002671 514 WLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVER 593 (894)
Q Consensus 514 ~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~i~i~~~~~~~g~~~~~ 593 (894)
..+++...++|.... . ..+||.|.|++.++...+.. ....
T Consensus 400 ---------~~~ll~~a~l~~~~~----~-------~~~~p~d~All~~a~~~~~~--------------------~~~~ 439 (902)
T PRK10517 400 ---------SERVLHSAWLNSHYQ----T-------GLKNLLDTAVLEGVDEESAR--------------------SLAS 439 (902)
T ss_pred ---------HHHHHHHHHhcCCcC----C-------CCCCHHHHHHHHHHHhcchh--------------------hhhh
Confidence 012334444443221 0 14799999999998753200 0134
Q ss_pred EEEEEEeecCCCCCceEEEEEEcCCCcEEEEEccchhhhhHhhccC---c------cccHHHHHHHHHHHHhcCCeEEEE
Q 002671 594 EFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKN---G------RMYEEATTKLLNEYGEAGLRTLAL 664 (894)
Q Consensus 594 ~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~~~~---~------~~~~~~~~~~l~~~~~~Glr~l~~ 664 (894)
.|+.++.+||+|.||||+++++.+++...+++|||++.|+++|+.. + ++..+.+.+..++++.+|+|++++
T Consensus 440 ~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlav 519 (902)
T PRK10517 440 RWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAV 519 (902)
T ss_pred cCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 5777889999999999999998877888999999999999999751 1 123456677788999999999999
Q ss_pred EEEeCCHHHHHHHHHHHHHHHhhhhhCHHHHHHHHHHhhhcccEEEEeeeecccccCChHHHHHHHHHcCCeEEEEcCCc
Q 002671 665 AYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDK 744 (894)
Q Consensus 665 A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~~lTGD~ 744 (894)
|||+++.++. .+ + ...|+||+|+|+++++||+|++++++|++|+++||+|+|+|||+
T Consensus 520 A~k~~~~~~~-~~-------------~---------~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~ 576 (902)
T PRK10517 520 ATKYLPAREG-DY-------------Q---------RADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDS 576 (902)
T ss_pred EEecCCcccc-cc-------------c---------cccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCC
Confidence 9998865321 00 0 11368999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcchH
Q 002671 745 METAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDD 824 (894)
Q Consensus 745 ~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~ 824 (894)
+.||.+||+++||... -+++|..++...+++
T Consensus 577 ~~tA~~IA~~lGI~~~-------------------------------------------------~v~~G~el~~l~~~e 607 (902)
T PRK10517 577 ELVAAKVCHEVGLDAG-------------------------------------------------EVLIGSDIETLSDDE 607 (902)
T ss_pred HHHHHHHHHHcCCCcc-------------------------------------------------CceeHHHHHhCCHHH
Confidence 9999999999999421 166777777654444
Q ss_pred HHHHHHHHhhccCeEEEEeCCchhHHHHHHHHhhcCCCEEEEEcCChhcHHHHHhCCccEEec
Q 002671 825 MKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS 887 (894)
Q Consensus 825 ~~~~~~~~~~~~~~vv~~r~~P~qK~~iv~~lk~~~~~~v~~iGDG~ND~~ml~~AdvGI~i~ 887 (894)
+.... ..++ +|||++|+||.++|+.+|+ .|++|+|+|||+||+|||++|||||||+
T Consensus 608 l~~~~----~~~~--VfAr~sPe~K~~IV~~Lq~-~G~vVam~GDGvNDaPALk~ADVGIAmg 663 (902)
T PRK10517 608 LANLA----ERTT--LFARLTPMHKERIVTLLKR-EGHVVGFMGDGINDAPALRAADIGISVD 663 (902)
T ss_pred HHHHH----hhCc--EEEEcCHHHHHHHHHHHHH-CCCEEEEECCCcchHHHHHhCCEEEEeC
Confidence 43333 3333 9999999999999999998 8999999999999999999999999995
No 14
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=1.5e-83 Score=788.86 Aligned_cols=601 Identities=20% Similarity=0.239 Sum_probs=462.4
Q ss_pred ccccCCCCCCCCeeecCCcchhhhhHHHHHHHh-hhHHHHHHHHHHHHhcccCCCCCCchhhhhHHHHHHHHHHHHHHHH
Q 002671 46 MHKKRPLKYCTNYISTTKYNFFSYFPKALFEQF-NRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALED 124 (894)
Q Consensus 46 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf-~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~d 124 (894)
+..+|+.+||+|.++.++.+.++ +.|++|| ..|++++++++++++++. ..|...++.+ +++++.++..++++
T Consensus 29 ev~~r~~~~G~N~i~~~~~~s~~---~~~l~~~~~~~~~~~L~~aa~ls~~~---g~~~~~~~i~-~~i~~~~~i~~~qe 101 (884)
T TIGR01522 29 EASHRRAFHGWNEFDVEEDESLW---KKFLSQFVKNPLILLLIASAVISVFM---GNIDDAVSIT-LAILIVVTVGFVQE 101 (884)
T ss_pred HHHHHHHhcCCCcCCCCCCCCHH---HHHHHHHhhChHHHHHHHHHHHHHHH---cchhhHHHHH-hHHHHHHHHHHHHH
Confidence 34567889999999987654432 8899999 999999999999999874 4555554433 44556677788999
Q ss_pred HHHhhchhhhc---cceEEEEeCCCeEEEeeccccccCcEEEeecCcccCceEEEeeecCCCCcEEEEecccCCCCccee
Q 002671 125 WRRFMQDKEVN---ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKV 201 (894)
Q Consensus 125 ~~r~k~~~~~n---~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~~~~ 201 (894)
++.+++.+.+. ..+++|+ |||++++|++++|+|||||.|++||.|||||+|+++++ +.||||+|||||.|+.
T Consensus 102 ~~a~~~l~~L~~l~~~~~~Vi-Rdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~----l~VDES~LTGES~pv~ 176 (884)
T TIGR01522 102 YRSEKSLEALNKLVPPECHLI-REGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVD----LSIDESNLTGETTPVS 176 (884)
T ss_pred HHHHHHHHHHhccCCCeeEEE-ECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCc----eEEEcccccCCCccee
Confidence 99888877665 4789999 89999999999999999999999999999999999543 8999999999999999
Q ss_pred ecccccCCCCCchhhhccceeEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEecccchhh
Q 002671 202 KRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVM 281 (894)
Q Consensus 202 K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~g~Vv~tG~~Tk~~ 281 (894)
|.+++..... .......+...|+||.+.+|. +.++|++||.+|.++
T Consensus 177 K~~~~~~~~~-------------~~~~~~~~n~v~~GT~v~~G~---------------------~~~~V~~tG~~T~~g 222 (884)
T TIGR01522 177 KVTAPIPAAT-------------NGDLAERSNIAFMGTLVRCGH---------------------GKGIVVGTGSNTEFG 222 (884)
T ss_pred cccccccccc-------------cccccccCceEEeCCEEEeee---------------------EEEEEEEecCccHHH
Confidence 9986432100 000112223456666666666 999999999999776
Q ss_pred hc---cCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCCCchhHHHHHHH
Q 002671 282 QN---ATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVT 358 (894)
Q Consensus 282 ~~---~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~ 358 (894)
+. .......++++++.++++..++.++.++++++.+++.++ .. ..| ...|..
T Consensus 223 ki~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~-~~----~~~--------------------~~~~~~ 277 (884)
T TIGR01522 223 AVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWF-QG----KDW--------------------LEMFTI 277 (884)
T ss_pred HHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc----CCH--------------------HHHHHH
Confidence 54 345556689999999999998877665555444333211 11 012 257788
Q ss_pred HHHHhhccccchhhHHHHHHHHHHHHHHhccccccccCCCCCeEEeccccccccccceEEEecCCCceeecceEEEEEEE
Q 002671 359 ALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSV 438 (894)
Q Consensus 359 ~i~ll~~~iP~sL~v~l~i~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~e~Lg~v~~I~~DKTGTLT~n~m~~~~~~i 438 (894)
++.+++.+|||+||++++++..+++.++ +++++++|+++++|.||++++||||||||||+|+|++.+++.
T Consensus 278 ~v~llv~aiP~~Lp~~vt~~l~~~~~r~----------ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~ 347 (884)
T TIGR01522 278 SVSLAVAAIPEGLPIIVTVTLALGVLRM----------SKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWT 347 (884)
T ss_pred HHHHHHHHccchHHHHHHHHHHHHHHHH----------hhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEe
Confidence 8999999999999999999999999988 899999999999999999999999999999999999999986
Q ss_pred cCcccCC-CchHHHHHHHHhhhhchhhhhhhhhhcccCCCCCccchhhhcccCCCCccccccCCCccccccccccCCCCC
Q 002671 439 AGTAYGV-SPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKE 517 (894)
Q Consensus 439 ~~~~y~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (894)
.+..+.. .... .. ....+..++. ....
T Consensus 348 ~~~~~~~~~~~~---------------------------------~~-------------~~~~~~~~~~------~~~~ 375 (884)
T TIGR01522 348 SDGLHTMLNAVS---------------------------------LN-------------QFGEVIVDGD------VLHG 375 (884)
T ss_pred cCceEeeccCCc---------------------------------cC-------------CCCccccccc------cccc
Confidence 5432110 0000 00 0000000000 0001
Q ss_pred CChhHHHHHHHHHhhcceeeecccCCCCCeeeecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEE
Q 002671 518 PNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKI 597 (894)
Q Consensus 518 ~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~i~i~~~~~~~g~~~~~~~~i 597 (894)
..+..+.+++.+.++||++..+.... ...++|+|.||+++++..|+.. ....|+.
T Consensus 376 ~~~~~~~~~l~~~~l~~~~~~~~~~~-----~~~g~p~e~All~~~~~~~~~~--------------------~~~~~~~ 430 (884)
T TIGR01522 376 FYTVAVSRILEAGNLCNNAKFRNEAD-----TLLGNPTDVALIELLMKFGLDD--------------------LRETYIR 430 (884)
T ss_pred ccCHHHHHHHHHHhhhCCCeecCCCC-----CcCCChHHHHHHHHHHHcCcHh--------------------HHhhCcE
Confidence 12234567888899999986543211 1237899999999999887631 1245778
Q ss_pred EEeecCCCCCceEEEEEEcC-CCcEEEEEccchhhhhHhhccC----c------cccHHHHHHHHHHHHhcCCeEEEEEE
Q 002671 598 LNLLDFTSKRKRMSVIVRDE-DGQILLLCKGADSIIFDRLSKN----G------RMYEEATTKLLNEYGEAGLRTLALAY 666 (894)
Q Consensus 598 l~~~~F~s~rkrmsviv~~~-~g~~~l~~KGa~~~i~~~~~~~----~------~~~~~~~~~~l~~~~~~Glr~l~~A~ 666 (894)
++.+||+|.||||+++++.+ ++.+++|+|||||.|+.+|+.. + ++.++.+.+++++++.+|+|++++||
T Consensus 431 ~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~ 510 (884)
T TIGR01522 431 VAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFAS 510 (884)
T ss_pred EeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEE
Confidence 89999999999999999864 5778999999999999999741 1 12345677888899999999999999
Q ss_pred EeCCHHHHHHHHHHHHHHHhhhhhCHHHHHHHHHHhhhcccEEEEeeeecccccCChHHHHHHHHHcCCeEEEEcCCcHH
Q 002671 667 KQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKME 746 (894)
Q Consensus 667 k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ 746 (894)
|++ +.+|+|+|+++++|++|++++++|+.|+++||+++|+|||++.
T Consensus 511 ~~~----------------------------------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~ 556 (884)
T TIGR01522 511 GPE----------------------------------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQE 556 (884)
T ss_pred EcC----------------------------------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHH
Confidence 865 2589999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcchHHH
Q 002671 747 TAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMK 826 (894)
Q Consensus 747 ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~ 826 (894)
||.++|+++||...... +++|+.+....++++.
T Consensus 557 tA~~ia~~~Gi~~~~~~-----------------------------------------------~v~g~~l~~~~~~~l~ 589 (884)
T TIGR01522 557 TAVSIARRLGMPSKTSQ-----------------------------------------------SVSGEKLDAMDDQQLS 589 (884)
T ss_pred HHHHHHHHcCCCCCCCc-----------------------------------------------eeEhHHhHhCCHHHHH
Confidence 99999999999754321 4567777655444443
Q ss_pred HHHHHHhhccCeEEEEeCCchhHHHHHHHHhhcCCCEEEEEcCChhcHHHHHhCCccEEecCccccC
Q 002671 827 HHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGCD 893 (894)
Q Consensus 827 ~~~~~~~~~~~~vv~~r~~P~qK~~iv~~lk~~~~~~v~~iGDG~ND~~ml~~AdvGI~i~g~eg~q 893 (894)
+.+ . +..||||++|+||..+|+.+|+ .|+.|+|+|||.||+|||++|||||+|+ .+|++
T Consensus 590 ~~~----~--~~~Vfar~~P~~K~~iv~~lq~-~g~~v~mvGDGvND~pAl~~AdVGia~g-~~g~~ 648 (884)
T TIGR01522 590 QIV----P--KVAVFARASPEHKMKIVKALQK-RGDVVAMTGDGVNDAPALKLADIGVAMG-QTGTD 648 (884)
T ss_pred HHh----h--cCeEEEECCHHHHHHHHHHHHH-CCCEEEEECCCcccHHHHHhCCeeEecC-CCcCH
Confidence 332 2 3459999999999999999998 8999999999999999999999999993 33543
No 15
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=2.9e-83 Score=781.54 Aligned_cols=586 Identities=20% Similarity=0.242 Sum_probs=445.5
Q ss_pred ccccCCCCCCCCeeecCCcchhhhhHHHHHHHhhhHHHHHHHHHHHHhccc--CC------CCCCchhhhhHHHHHHHHH
Q 002671 46 MHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP--LS------PFSPVSMLLPLAIVVGVSM 117 (894)
Q Consensus 46 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~--~~------~~~~~~~~~~l~~v~~~~~ 117 (894)
+...|+.+||+|.++.++...++ +.|++||+.++.+.++++++++++. +. ..+|...++ ++++++++.
T Consensus 50 ea~~rl~~~G~N~l~~~~~~~~~---~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~i-I~~~v~l~~ 125 (903)
T PRK15122 50 DAAERLQRYGPNEVAHEKPPHAL---VQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGEETDLTGVII-ILTMVLLSG 125 (903)
T ss_pred HHHHHHHhcCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCccccHhHHHH-HHHHHHHHH
Confidence 34568889999999987765433 7899999999999999999999874 11 123444444 456677888
Q ss_pred HHHHHHHHHHhhchhhhc---cceEEEEeCC------CeEEEeeccccccCcEEEeecCcccCceEEEeeecCCCCcEEE
Q 002671 118 AKEALEDWRRFMQDKEVN---ARKVSVHVGN------GVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYV 188 (894)
Q Consensus 118 ~~~~~~d~~r~k~~~~~n---~~~~~V~~r~------g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~V 188 (894)
+.+++++++..++.+.+. ..+++|+ |+ |++++|++++|+|||||.|++||.|||||+|+++++ +.|
T Consensus 126 ~i~~~qe~~a~~a~~~L~~l~~~~~~V~-Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~----l~V 200 (903)
T PRK15122 126 LLRFWQEFRSNKAAEALKAMVRTTATVL-RRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRD----LFI 200 (903)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCceEEE-ECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCc----eEE
Confidence 889999999988766554 4789999 67 589999999999999999999999999999999543 789
Q ss_pred EecccCCCCcceeecccccCCCCCchhhhccceeEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeecceEeecCCeEE
Q 002671 189 ETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVY 268 (894)
Q Consensus 189 des~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~ 268 (894)
|||+|||||.|+.|.+..........+. ..+. ..+..+.....|+||.+.+|. +.
T Consensus 201 DES~LTGES~PV~K~~~~~~~~~~~~~~---~~~~-~~~~~~~~n~vfaGT~V~~G~---------------------~~ 255 (903)
T PRK15122 201 SQAVLTGEALPVEKYDTLGAVAGKSADA---LADD-EGSLLDLPNICFMGTNVVSGT---------------------AT 255 (903)
T ss_pred EccccCCCCcceeeeccccccccccccc---cccc-cCCcccccceEEeCCEEEeee---------------------EE
Confidence 9999999999999986311000000000 0000 000001122346666666665 99
Q ss_pred EEEEEecccchhhhccCC--CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCC
Q 002671 269 GSVIFTGHDSKVMQNATT--SPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPG 346 (894)
Q Consensus 269 g~Vv~tG~~Tk~~~~~~~--~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 346 (894)
++|++||.+|.+++.... .+..++++++.++++..++..+.++++.+.+++..+... .|
T Consensus 256 ~~V~atG~~T~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~~-----~~-------------- 316 (903)
T PRK15122 256 AVVVATGSRTYFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTKG-----DW-------------- 316 (903)
T ss_pred EEEEEeccccHhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccC-----CH--------------
Confidence 999999999977554432 144568999999999888877766666554443322110 12
Q ss_pred CCchhHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhccccccccCCCCCeEEeccccccccccceEEEecCCCce
Q 002671 347 KPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTL 426 (894)
Q Consensus 347 ~~~~~~~~~~~~~i~ll~~~iP~sL~v~l~i~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~e~Lg~v~~I~~DKTGTL 426 (894)
...|.+++.+++.+||++||++++++...++.++ +++++++|+++++|.||++++|||||||||
T Consensus 317 ------~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~m----------ak~~ilVk~l~avE~Lg~v~vIc~DKTGTL 380 (903)
T PRK15122 317 ------LEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAM----------ARRKVVVKRLNAIQNFGAMDVLCTDKTGTL 380 (903)
T ss_pred ------HHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH----------HHcCCeecccchhhhhcCCcEEEecCCccc
Confidence 2577888999999999999999999999999888 889999999999999999999999999999
Q ss_pred eecceEEEEEEEcCcccCCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCCccchhhhcccCCCCccccccCCCcccc
Q 002671 427 TCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFED 506 (894)
Q Consensus 427 T~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 506 (894)
|+|+|++.+++.... ..
T Consensus 381 T~~~m~V~~~~~~~~---~~------------------------------------------------------------ 397 (903)
T PRK15122 381 TQDRIILEHHLDVSG---RK------------------------------------------------------------ 397 (903)
T ss_pred ccCeEEEEEEEcCCC---CC------------------------------------------------------------
Confidence 999999988652110 00
Q ss_pred ccccccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCCeeeecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCC
Q 002671 507 SRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPP 586 (894)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~i~i~~~~~~ 586 (894)
. .+++...++|... + . ..+||.|.|+++++...|...
T Consensus 398 -------------~---~~~l~~a~l~s~~--~--~-------~~~~p~e~All~~a~~~~~~~---------------- 434 (903)
T PRK15122 398 -------------D---ERVLQLAWLNSFH--Q--S-------GMKNLMDQAVVAFAEGNPEIV---------------- 434 (903)
T ss_pred -------------h---HHHHHHHHHhCCC--C--C-------CCCChHHHHHHHHHHHcCchh----------------
Confidence 0 0123333333110 0 0 147999999999998766421
Q ss_pred CCCCceeEEEEEEeecCCCCCceEEEEEEcCCCcEEEEEccchhhhhHhhccC---------ccccHHHHHHHHHHHHhc
Q 002671 587 KGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKN---------GRMYEEATTKLLNEYGEA 657 (894)
Q Consensus 587 ~g~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~~~~ 657 (894)
....|+.++.+||++.||||++++++.+|++++++|||++.|+++|+.. +.+.++.+.+.+++++.+
T Consensus 435 ----~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~ 510 (903)
T PRK15122 435 ----KPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNAD 510 (903)
T ss_pred ----hhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhC
Confidence 0234677888999999999999999878889999999999999999742 112345677778899999
Q ss_pred CCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhCHHHHHHHHHHhhhcccEEEEeeeecccccCChHHHHHHHHHcCCeE
Q 002671 658 GLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKI 737 (894)
Q Consensus 658 Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv 737 (894)
|+|++++|||+++.++..++ ..+..|+||+|+|+++++||+|++++++|++|+++||+|
T Consensus 511 G~rvlavA~k~~~~~~~~~~---------------------~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v 569 (903)
T PRK15122 511 GFRVLLVATREIPGGESRAQ---------------------YSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAV 569 (903)
T ss_pred CCEEEEEEEeccCccccccc---------------------cccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeE
Confidence 99999999999865432110 012347899999999999999999999999999999999
Q ss_pred EEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhhhhhhccCCCCCceEEEEeCchh
Q 002671 738 WVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTL 817 (894)
Q Consensus 738 ~~lTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l 817 (894)
+|+|||++.||.+||+++||.... +++|..+
T Consensus 570 ~miTGD~~~tA~aIA~~lGI~~~~-------------------------------------------------vi~G~el 600 (903)
T PRK15122 570 KVLTGDNPIVTAKICREVGLEPGE-------------------------------------------------PLLGTEI 600 (903)
T ss_pred EEECCCCHHHHHHHHHHcCCCCCC-------------------------------------------------ccchHhh
Confidence 999999999999999999995211 5677777
Q ss_pred hhhcchHHHHHHHHHhhccCeEEEEeCCchhHHHHHHHHhhcCCCEEEEEcCChhcHHHHHhCCccEEec
Q 002671 818 AYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS 887 (894)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~vv~~r~~P~qK~~iv~~lk~~~~~~v~~iGDG~ND~~ml~~AdvGI~i~ 887 (894)
+.+.++++.+. ...++ +|||++|+||..+|+.+|+ .|++|+|+|||.||+|||++|||||||+
T Consensus 601 ~~~~~~el~~~----v~~~~--VfAr~sPe~K~~iV~~Lq~-~G~vVamtGDGvNDaPALk~ADVGIAmg 663 (903)
T PRK15122 601 EAMDDAALARE----VEERT--VFAKLTPLQKSRVLKALQA-NGHTVGFLGDGINDAPALRDADVGISVD 663 (903)
T ss_pred hhCCHHHHHHH----hhhCC--EEEEeCHHHHHHHHHHHHh-CCCEEEEECCCchhHHHHHhCCEEEEeC
Confidence 76655444333 33333 9999999999999999998 8999999999999999999999999995
No 16
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=5.1e-83 Score=779.06 Aligned_cols=570 Identities=20% Similarity=0.233 Sum_probs=446.5
Q ss_pred ccccCCCCCCCCeeecCCcchhhhhHHHHHHHhhhHHHHHHHHHHHHhcccCCCCCCchhhhhHHHHHHHHHHHHHHHHH
Q 002671 46 MHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDW 125 (894)
Q Consensus 46 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~d~ 125 (894)
+...|+.+||+|.++.++.+.++ +.|++||+.|++++++++++++++. ..|+..+ .++++++++.+...++++
T Consensus 38 ev~~r~~~~G~N~l~~~~~~~~~---~~~~~~~~~p~~~iL~~~a~ls~~~---~~~~~~~-iI~~iv~~~~~i~~~~e~ 110 (867)
T TIGR01524 38 EVTERLAEFGPNQTVEEKKVPNL---RLLIRAFNNPFIYILAMLMGVSYLT---DDLEATV-IIALMVLASGLLGFIQES 110 (867)
T ss_pred HHHHHHHhcCCCcCCCCCCCCHH---HHHHHHHhhHHHHHHHHHHHHHHHH---hhHHHHH-HhhhHHHHHHHHHHHHHH
Confidence 34668889999999988765332 8899999999999999999999874 3444444 455667778888888888
Q ss_pred HHhhchhhhc---cceEEEEeC------CCeEEEeeccccccCcEEEeecCcccCceEEEeeecCCCCcEEEEecccCCC
Q 002671 126 RRFMQDKEVN---ARKVSVHVG------NGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGE 196 (894)
Q Consensus 126 ~r~k~~~~~n---~~~~~V~~r------~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGE 196 (894)
+..++...++ ..+++|+ | ||++++|++++|+|||||.|++||.|||||+|+++++ +.||||+||||
T Consensus 111 ~a~ka~~~L~~l~~~~~~V~-R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~----l~VDES~LTGE 185 (867)
T TIGR01524 111 RAERAAYALKNMVKNTATVL-RVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARD----LFINQSALTGE 185 (867)
T ss_pred HHHHHHHHHhhhccCeeEEE-EecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEecCc----eEEEcccccCC
Confidence 8877655444 5789999 7 8999999999999999999999999999999999443 79999999999
Q ss_pred CcceeecccccCCCCCchhhhccceeEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEecc
Q 002671 197 TNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGH 276 (894)
Q Consensus 197 s~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~g~Vv~tG~ 276 (894)
|.|+.|.+++.... .. ...+.+...|+||.+.+|. +.++|++||.
T Consensus 186 S~PV~K~~~~~~~~---~~-----------~~~~~~n~vfaGT~v~~G~---------------------~~~~V~~tG~ 230 (867)
T TIGR01524 186 SLPVEKFVEDKRAR---DP-----------EILERENLCFMGTNVLSGH---------------------AQAVVLATGS 230 (867)
T ss_pred CCcccccCCccccc---cc-----------cccccccceecCCeEEEeE---------------------EEEEEEEEcC
Confidence 99999988653200 00 0001122456777777666 9999999999
Q ss_pred cchhhhcc---CCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCCCchhHH
Q 002671 277 DSKVMQNA---TTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGL 353 (894)
Q Consensus 277 ~Tk~~~~~---~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 353 (894)
+|.+++.. .. +..++++++.++++..++..+.++++++.++++.+... .| .
T Consensus 231 ~T~~gki~~~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~-----~~--------------------~ 284 (867)
T TIGR01524 231 STWFGSLAIAATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMKG-----DW--------------------L 284 (867)
T ss_pred ccHHHHHHHHhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhcC-----CH--------------------H
Confidence 99775543 34 55578999999999999988888877776555432111 12 2
Q ss_pred HHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhccccccccCCCCCeEEeccccccccccceEEEecCCCceeecceEE
Q 002671 354 AHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDF 433 (894)
Q Consensus 354 ~~~~~~i~ll~~~iP~sL~v~l~i~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~e~Lg~v~~I~~DKTGTLT~n~m~~ 433 (894)
..|.+++.+++.+||++||++++++...++.++ +++++++|+++++|.||++++||||||||||+|+|++
T Consensus 285 ~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~m----------ak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v 354 (867)
T TIGR01524 285 EAFLFALAVAVGLTPEMLPMIVSSNLAKGAINM----------SKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIEL 354 (867)
T ss_pred HHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHH----------HhCCcEEccchhhhhccCccEEEecCCCccccCeEEE
Confidence 478888999999999999999999999999988 8999999999999999999999999999999999999
Q ss_pred EEEEEcCcccCCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCCccchhhhcccCCCCccccccCCCccccccccccC
Q 002671 434 LKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGN 513 (894)
Q Consensus 434 ~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 513 (894)
.+++... .. .
T Consensus 355 ~~~~~~~----~~-~----------------------------------------------------------------- 364 (867)
T TIGR01524 355 EKHIDSS----GE-T----------------------------------------------------------------- 364 (867)
T ss_pred EEEecCC----CC-C-----------------------------------------------------------------
Confidence 8863100 00 0
Q ss_pred CCCCCChhHHHHHHHHHhhcceeeecccCCCCCeeeecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCcee
Q 002671 514 WLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVER 593 (894)
Q Consensus 514 ~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~i~i~~~~~~~g~~~~~ 593 (894)
..+++...++|+... -..+||.|.|+++++....... ...
T Consensus 365 ---------~~~~l~~a~l~~~~~-----------~~~~~p~~~Al~~~~~~~~~~~--------------------~~~ 404 (867)
T TIGR01524 365 ---------SERVLKMAWLNSYFQ-----------TGWKNVLDHAVLAKLDESAARQ--------------------TAS 404 (867)
T ss_pred ---------HHHHHHHHHHhCCCC-----------CCCCChHHHHHHHHHHhhchhh--------------------Hhh
Confidence 012333334332210 0136999999999987532110 124
Q ss_pred EEEEEEeecCCCCCceEEEEEEcCCCcEEEEEccchhhhhHhhccC---------ccccHHHHHHHHHHHHhcCCeEEEE
Q 002671 594 EFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKN---------GRMYEEATTKLLNEYGEAGLRTLAL 664 (894)
Q Consensus 594 ~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~~~~Glr~l~~ 664 (894)
.|+.++.+||+|.||||+++++++++..++++|||++.|+++|+.. +++.++.+.+.+++++.+|+|++++
T Consensus 405 ~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlav 484 (867)
T TIGR01524 405 RWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAV 484 (867)
T ss_pred cCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 5677888999999999999999776678999999999999999751 1123456778889999999999999
Q ss_pred EEEeCCHHHHHHHHHHHHHHHhhhhhCHHHHHHHHHHhhhcccEEEEeeeecccccCChHHHHHHHHHcCCeEEEEcCCc
Q 002671 665 AYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDK 744 (894)
Q Consensus 665 A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~~lTGD~ 744 (894)
|||+++.++.. + .+..|.||+|+|+++++|++|++++++|++|+++||+|+|+|||+
T Consensus 485 A~~~~~~~~~~-~----------------------~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~ 541 (867)
T TIGR01524 485 ATKTLKVGEAD-F----------------------TKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDN 541 (867)
T ss_pred EEeccCccccc-c----------------------cccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCC
Confidence 99998654210 0 012368999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcchH
Q 002671 745 METAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDD 824 (894)
Q Consensus 745 ~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~ 824 (894)
+.||.+||+++||...+ +++|..+....+++
T Consensus 542 ~~tA~aIA~~lGI~~~~-------------------------------------------------v~~g~~l~~~~~~e 572 (867)
T TIGR01524 542 EIVTARICQEVGIDAND-------------------------------------------------FLLGADIEELSDEE 572 (867)
T ss_pred HHHHHHHHHHcCCCCCC-------------------------------------------------eeecHhhhhCCHHH
Confidence 99999999999995321 55666666554433
Q ss_pred HHHHHHHHhhccCeEEEEeCCchhHHHHHHHHhhcCCCEEEEEcCChhcHHHHHhCCccEEec
Q 002671 825 MKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS 887 (894)
Q Consensus 825 ~~~~~~~~~~~~~~vv~~r~~P~qK~~iv~~lk~~~~~~v~~iGDG~ND~~ml~~AdvGI~i~ 887 (894)
+.+ +... ..+|||++|+||.++|+.+|+ .|++|+|+|||.||+|||++|||||||+
T Consensus 573 l~~----~~~~--~~vfAr~~Pe~K~~iV~~lq~-~G~vVam~GDGvNDapALk~AdVGIAmg 628 (867)
T TIGR01524 573 LAR----ELRK--YHIFARLTPMQKSRIIGLLKK-AGHTVGFLGDGINDAPALRKADVGISVD 628 (867)
T ss_pred HHH----Hhhh--CeEEEECCHHHHHHHHHHHHh-CCCEEEEECCCcccHHHHHhCCEEEEeC
Confidence 332 3333 339999999999999999998 8999999999999999999999999996
No 17
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=3.4e-82 Score=762.64 Aligned_cols=547 Identities=21% Similarity=0.265 Sum_probs=444.0
Q ss_pred cccCCCCCCCCeeecCCcchhhhhHHHHHHHhhhHHHHHHHHHHHHhcccCCCCCCchhhhhHHHHHHHHHHHHHHHHHH
Q 002671 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWR 126 (894)
Q Consensus 47 ~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~d~~ 126 (894)
...|+.+||+|.++..+.+.| +.|+++|+.|+++.++++++++++. ..|...++ ++++++++.+.+++++++
T Consensus 7 a~~r~~~~G~N~~~~~~~~~~----~~~~~~~~~~~~~lL~~aa~~s~~~---~~~~~~~~-i~~~~~i~~~i~~~qe~~ 78 (755)
T TIGR01647 7 AKKRLAKYGPNELPEKKVSPL----LKFLGFFWNPLSWVMEAAAIIAIAL---ENWVDFVI-ILGLLLLNATIGFIEENK 78 (755)
T ss_pred HHHHHHhcCCCCCCCCCCCHH----HHHHHHHhchHHHHHHHHHHHHHhh---cchhhhhh-hhhhhHHHHHHHHHHHHH
Confidence 345788999999998666655 7789999999999999999999874 45555554 446667788888999999
Q ss_pred Hhhchhhhc---cceEEEEeCCCeEEEeeccccccCcEEEeecCcccCceEEEeeecCCCCcEEEEecccCCCCcceeec
Q 002671 127 RFMQDKEVN---ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKR 203 (894)
Q Consensus 127 r~k~~~~~n---~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~~~~K~ 203 (894)
..++.+.+. ..+++|+ |||++++|+.++|+|||||.|++||.|||||+|+++++ +.||||+|||||.|+.|.
T Consensus 79 a~~~~~~L~~~~~~~~~V~-Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~----~~VDeS~LTGES~PV~K~ 153 (755)
T TIGR01647 79 AGNAVEALKQSLAPKARVL-RDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDY----IQVDQAALTGESLPVTKK 153 (755)
T ss_pred HHHHHHHHHhhCCCeEEEE-ECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCc----eEEEcccccCCccceEec
Confidence 888766554 5789999 89999999999999999999999999999999999332 899999999999999998
Q ss_pred ccccCCCCCchhhhccceeEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEecccchhhh-
Q 002671 204 AMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQ- 282 (894)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~g~Vv~tG~~Tk~~~- 282 (894)
+++.. |+||.+.+|. +.++|+.||.+|.+++
T Consensus 154 ~~~~v---------------------------~aGT~v~~G~---------------------~~~~V~~tG~~T~~g~i 185 (755)
T TIGR01647 154 TGDIA---------------------------YSGSTVKQGE---------------------AEAVVTATGMNTFFGKA 185 (755)
T ss_pred cCCee---------------------------eccCEEEccE---------------------EEEEEEEcCCccHHHHH
Confidence 76543 9999999998 9999999999997655
Q ss_pred --ccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCCCchhHHHHHHHHH
Q 002671 283 --NATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTAL 360 (894)
Q Consensus 283 --~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~i 360 (894)
....++..++++++.++++..+++++.++++++.++++.+.... .| ...+.+++
T Consensus 186 ~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~----~~--------------------~~~~~~~i 241 (755)
T TIGR01647 186 AALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGE----SF--------------------REGLQFAL 241 (755)
T ss_pred HHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC----CH--------------------HHHHHHHH
Confidence 44456666789999999999999888888887776655431111 12 35778899
Q ss_pred HHhhccccchhhHHHHHHHHHHHHHHhccccccccCCCCCeEEeccccccccccceEEEecCCCceeecceEEEEEEEcC
Q 002671 361 ILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAG 440 (894)
Q Consensus 361 ~ll~~~iP~sL~v~l~i~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~e~Lg~v~~I~~DKTGTLT~n~m~~~~~~i~~ 440 (894)
.+++.+|||+||++++++..+++.++ +++++++|+++.+|.||.+++||||||||||+|+|++.+++..+
T Consensus 242 ~vlv~a~P~~Lp~~~~~~la~g~~r~----------ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~ 311 (755)
T TIGR01647 242 VLLVGGIPIAMPAVLSVTMAVGAAEL----------AKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFF 311 (755)
T ss_pred HHHHHhCCcchHHHHHHHHHHHHHHH----------HhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecC
Confidence 99999999999999999999999988 89999999999999999999999999999999999999986532
Q ss_pred cccCCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCCccchhhhcccCCCCccccccCCCccccccccccCCCCCCCh
Q 002671 441 TAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNV 520 (894)
Q Consensus 441 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (894)
..+ +
T Consensus 312 ~~~----~------------------------------------------------------------------------ 315 (755)
T TIGR01647 312 NGF----D------------------------------------------------------------------------ 315 (755)
T ss_pred CCC----C------------------------------------------------------------------------
Confidence 100 0
Q ss_pred hHHHHHHHHHhhcceeeecccCCCCCeeeecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEEEe
Q 002671 521 DTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNL 600 (894)
Q Consensus 521 ~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~i~i~~~~~~~g~~~~~~~~il~~ 600 (894)
..+++...++|+.. .++||.|.|++++++..+. ....|++++.
T Consensus 316 --~~~~l~~a~~~~~~-------------~~~~pi~~Ai~~~~~~~~~----------------------~~~~~~~~~~ 358 (755)
T TIGR01647 316 --KDDVLLYAALASRE-------------EDQDAIDTAVLGSAKDLKE----------------------ARDGYKVLEF 358 (755)
T ss_pred --HHHHHHHHHHhCCC-------------CCCChHHHHHHHHHHHhHH----------------------HHhcCceEEE
Confidence 01234445555420 1469999999999876430 0245677889
Q ss_pred ecCCCCCceEEEEEEcCC-CcEEEEEccchhhhhHhhccCccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHH
Q 002671 601 LDFTSKRKRMSVIVRDED-GQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNS 679 (894)
Q Consensus 601 ~~F~s~rkrmsviv~~~~-g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~ 679 (894)
+||++.+|+|++++++++ |+.++++|||++.|+++|+... +.++.+.+.+++++.+|+|++++|+|+.
T Consensus 359 ~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~-~~~~~~~~~~~~~~~~G~rvl~vA~~~~---------- 427 (755)
T TIGR01647 359 VPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKK-EIEEKVEEKVDELASRGYRALGVARTDE---------- 427 (755)
T ss_pred eccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEEEcC----------
Confidence 999999999999998764 7888999999999999997532 3456777888999999999999999721
Q ss_pred HHHHHHhhhhhCHHHHHHHHHHhhhcccEEEEeeeecccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002671 680 EFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (894)
Q Consensus 680 ~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~ 759 (894)
|.+|+|+|+++++|++|++++++|++|+++||+|+|+|||++.||.+||+++||..
T Consensus 428 ------------------------e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~ 483 (755)
T TIGR01647 428 ------------------------EGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGT 483 (755)
T ss_pred ------------------------CCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC
Confidence 36899999999999999999999999999999999999999999999999999964
Q ss_pred cCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcchHHHHHHHHHhhccCeE
Q 002671 760 QGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASV 839 (894)
Q Consensus 760 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~v 839 (894)
.. +.+ ++ +.+|+.++...+++ +.++...++
T Consensus 484 ~~-----~~~---~~------------------------------------l~~~~~~~~~~~~~----~~~~~~~~~-- 513 (755)
T TIGR01647 484 NI-----YTA---DV------------------------------------LLKGDNRDDLPSGE----LGEMVEDAD-- 513 (755)
T ss_pred CC-----cCH---HH------------------------------------hcCCcchhhCCHHH----HHHHHHhCC--
Confidence 21 000 00 11222222222222 223333333
Q ss_pred EEEeCCchhHHHHHHHHhhcCCCEEEEEcCChhcHHHHHhCCccEEec
Q 002671 840 ICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS 887 (894)
Q Consensus 840 v~~r~~P~qK~~iv~~lk~~~~~~v~~iGDG~ND~~ml~~AdvGI~i~ 887 (894)
+|||++|+||..+|+.+|+ .|++|+|+|||.||+|||++|||||||+
T Consensus 514 vfAr~~Pe~K~~iV~~lq~-~G~~VamvGDGvNDapAL~~AdVGIAm~ 560 (755)
T TIGR01647 514 GFAEVFPEHKYEIVEILQK-RGHLVGMTGDGVNDAPALKKADVGIAVA 560 (755)
T ss_pred EEEecCHHHHHHHHHHHHh-cCCEEEEEcCCcccHHHHHhCCeeEEec
Confidence 9999999999999999998 8999999999999999999999999995
No 18
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-81 Score=708.33 Aligned_cols=690 Identities=21% Similarity=0.279 Sum_probs=497.0
Q ss_pred ccCCCCCCCCeeecCCcchhhhhHHHHHHHhhhHHHHHHHHHHHHhcccCCCCCCchhhhhHHHHHHHHHHHHHHHHHHH
Q 002671 48 KKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRR 127 (894)
Q Consensus 48 ~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~d~~r 127 (894)
..|+.-||+|.|..+..+++ ..|+.+..+|+++|..+..++|+. .+|+.+...++++...+++...+|..+.
T Consensus 167 ~~r~~iyG~N~i~l~ik~i~----~iLv~EvL~PfYlFQ~fSv~lW~~----d~Y~~YA~cI~iisv~Si~~sv~e~r~q 238 (1140)
T KOG0208|consen 167 IDRRIIYGRNVISLPIKSIS----QILVKEVLNPFYLFQAFSVALWLA----DSYYYYAFCIVIISVYSIVLSVYETRKQ 238 (1140)
T ss_pred HhHHhhcCCceeeeecccHH----HHHHHhccchHHHHHhHHhhhhhc----ccchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 34677899999999999887 789999999999998888888876 4555556656666677777788888877
Q ss_pred hhchhhhcc--ceEEEEeCCCeEEEeeccccccCcEEEeec-CcccCceEEEeeecCCCCcEEEEecccCCCCcceeecc
Q 002671 128 FMQDKEVNA--RKVSVHVGNGVFSYKPWEKIQVGDIVKVEK-DQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRA 204 (894)
Q Consensus 128 ~k~~~~~n~--~~~~V~~r~g~~~~i~~~~L~vGDII~l~~-ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~~~~K~~ 204 (894)
.+..+.+-. ..|+|+ |+|.|++|.++||+||||+.+.+ +-..|||++|++ |.|.||||+|||||.|+.|.|
T Consensus 239 s~rlr~mv~~~~~V~V~-R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~-----g~civNEsmLTGESVPv~K~~ 312 (1140)
T KOG0208|consen 239 SIRLRSMVKFTCPVTVI-RDGFWETVDSSELVPGDILYIPPPGKIMPCDALLIS-----GDCIVNESMLTGESVPVTKTP 312 (1140)
T ss_pred HHHHHHHhcCCceEEEE-ECCEEEEEeccccccccEEEECCCCeEeecceEEEe-----CcEEeecccccCCcccccccC
Confidence 777777765 478999 89999999999999999999998 999999999999 889999999999999999999
Q ss_pred cccCCCCCchhhhccceeEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEecccchhhhcc
Q 002671 205 MEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNA 284 (894)
Q Consensus 205 ~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~g~Vv~tG~~Tk~~~~~ 284 (894)
.+.-.+ .....+.+...+.....|.||.++.-..+. .+.+.++|++||..|..++..
T Consensus 313 l~~~~~--------~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~---------------g~~v~a~V~RTGF~T~KGqLV 369 (1140)
T KOG0208|consen 313 LPMGTD--------SLDSITISMSTNSRHTLFCGTKVLQARAYL---------------GGPVLAMVLRTGFSTTKGQLV 369 (1140)
T ss_pred Cccccc--------cCcCeeechhhcCcceeeccceEEEeecCC---------------CCceEEEEEeccccccccHHH
Confidence 862211 011123333445556678888887543111 234899999999999777766
Q ss_pred CCC---CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCCCchhHHHHHHHHHH
Q 002671 285 TTS---PSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALI 361 (894)
Q Consensus 285 ~~~---~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~i~ 361 (894)
+.. +.....+-+..-+++ .++.++++++++...+..... + ...-..+++++.
T Consensus 370 RsilyPkP~~fkfyrds~~fi----~~l~~ia~~gfiy~~i~l~~~-------g--------------~~~~~iiirsLD 424 (1140)
T KOG0208|consen 370 RSILYPKPVNFKFYRDSFKFI----LFLVIIALIGFIYTAIVLNLL-------G--------------VPLKTIIIRSLD 424 (1140)
T ss_pred HhhcCCCCcccHHHHHHHHHH----HHHHHHHHHHHHHHhHhHHHc-------C--------------CCHHHHhhhhhc
Confidence 643 222233333333333 333444555554444322111 0 111247789999
Q ss_pred HhhccccchhhHHHHHHHHHHHHHHhccccccccCCCCCeEEeccccccccccceEEEecCCCceeecceEEEEEEEcCc
Q 002671 362 LYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGT 441 (894)
Q Consensus 362 ll~~~iP~sL~v~l~i~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~e~Lg~v~~I~~DKTGTLT~n~m~~~~~~i~~~ 441 (894)
++.+.+|++||.++++.......++ ++++|.|-+++.+...|+++.+|||||||||++.+.+..+..-..
T Consensus 425 liTi~VPPALPAaltvG~~~a~~RL----------kkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~ 494 (1140)
T KOG0208|consen 425 LITIVVPPALPAALTVGIIYAQSRL----------KKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVER 494 (1140)
T ss_pred EEEEecCCCchhhhhHHHHHHHHHH----------HhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccc
Confidence 9999999999999999999998888 899999999999999999999999999999999999988865221
Q ss_pred ccCCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCCccchhhhcccCCCCccccccCCCccccccccccCCCCCCChh
Q 002671 442 AYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVD 521 (894)
Q Consensus 442 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (894)
.-.. ..+.. .. ..++ . +.+.. + ..+....
T Consensus 495 ~~~~-~~~~~--~~----------~~~~-------------------------~------~~~~~--l-----~~~~~~~ 523 (1140)
T KOG0208|consen 495 NVDD-GPELK--VV----------TEDS-------------------------L------QLFYK--L-----SLRSSSL 523 (1140)
T ss_pred cccc-cchhh--hh----------hhhh-------------------------c------cceee--c-----cccccCC
Confidence 1000 00000 00 0000 0 00000 0 0001111
Q ss_pred HHHHHHHHHhhcceeeecccCCCCCeeeecCChhHHHHHHHHHHCCcEEEEEc--------CCeE---EEEecC---CCC
Q 002671 522 TLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRT--------QSSV---FIRERY---PPK 587 (894)
Q Consensus 522 ~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~--------~~~i---~i~~~~---~~~ 587 (894)
....|..++|.||+.....+. ..++|.|.-+.++ .|+.+.+.. .+++ .++... +..
T Consensus 524 ~~~~~~~a~atCHSL~~v~g~-------l~GDPLdlkmfe~---t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~ 593 (1140)
T KOG0208|consen 524 PMGNLVAAMATCHSLTLVDGT-------LVGDPLDLKMFES---TGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQS 593 (1140)
T ss_pred chHHHHHHHhhhceeEEeCCe-------eccCceeeeeeec---cceEEEeccccchhhhhhCCccCCEeCCCcccccCC
Confidence 234688999999988765432 2468888777653 566664421 0111 111111 001
Q ss_pred CCCceeEEEEEEeecCCCCCceEEEEEEcC-CCcEEEEEccchhhhhHhhccCccccHHHHHHHHHHHHhcCCeEEEEEE
Q 002671 588 GQPVEREFKILNLLDFTSKRKRMSVIVRDE-DGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAY 666 (894)
Q Consensus 588 g~~~~~~~~il~~~~F~s~rkrmsviv~~~-~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~ 666 (894)
.+.....+-+++.+||+|..+||||||.++ +.+..+|+|||||.|.+.|.++. +++.+.+.++.|+.+|+|++++|+
T Consensus 594 t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~t--vP~dy~evl~~Yt~~GfRVIAlA~ 671 (1140)
T KOG0208|consen 594 TECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPET--VPADYQEVLKEYTHQGFRVIALAS 671 (1140)
T ss_pred CcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCccc--CCccHHHHHHHHHhCCeEEEEEec
Confidence 111123799999999999999999999986 46789999999999999999875 788999999999999999999999
Q ss_pred EeCCHHHHHHHHHHHHHHHhhhhhCHHHHHHHHHHhhhcccEEEEeeeecccccCChHHHHHHHHHcCCeEEEEcCCcHH
Q 002671 667 KQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKME 746 (894)
Q Consensus 667 k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ 746 (894)
|.+... .|.+..+ ..| +.+|.||+|+|++.+|++||+.++.+|++|.+|+|+++|+|||+..
T Consensus 672 K~L~~~---~~~~~~~-------~~R--------d~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNll 733 (1140)
T KOG0208|consen 672 KELETS---TLQKAQK-------LSR--------DTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLL 733 (1140)
T ss_pred CccCcc---hHHHHhh-------ccH--------hhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchh
Confidence 999876 4443221 244 7889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccccccCceEEEEecCCch-h-hHHHHHHHHHHhHH----HHHHhhhhhhh--ccCCCCCceEEEEeCchhh
Q 002671 747 TAINIGFACSLLRQGMKQICITALNSD-S-VGKAAKEAVKDNIL----MQITNASQMIK--LERDPHAAYALIIEGKTLA 818 (894)
Q Consensus 747 ta~~ia~~~gl~~~~~~~~~i~~~~~~-~-~~~~~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~~lvi~G~~l~ 818 (894)
||+.+|++||++.+..+.+.......+ + .....+........ .+........+ ........+.+.++|++++
T Consensus 734 TaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~ 813 (1140)
T KOG0208|consen 734 TAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQ 813 (1140)
T ss_pred eeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhH
Confidence 999999999999998777665544221 0 00000000000000 00000000000 0112346799999999999
Q ss_pred hhcchHHHHHHHHHhhccCeEEEEeCCchhHHHHHHHHhhcCCCEEEEEcCChhcHHHHHhCCccEEecCccccCC
Q 002671 819 YALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGCDG 894 (894)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~vv~~r~~P~qK~~iv~~lk~~~~~~v~~iGDG~ND~~ml~~AdvGI~i~g~eg~qa 894 (894)
.+. .+..+.+.++..+|. |||||+|.||+++|+.+|+ .|+.|+|||||+||++||++|||||++|.+|.+-|
T Consensus 814 ~i~-~~~~~l~~~Il~~~~--VfARMsP~qK~~Lie~lQk-l~y~VgfCGDGANDCgALKaAdvGISLSeaEASvA 885 (1140)
T KOG0208|consen 814 VIL-EHFPELVPKILLKGT--VFARMSPDQKAELIEALQK-LGYKVGFCGDGANDCGALKAADVGISLSEAEASVA 885 (1140)
T ss_pred HHH-hhcHHHHHHHHhcCe--EEeecCchhHHHHHHHHHh-cCcEEEecCCCcchhhhhhhcccCcchhhhhHhhc
Confidence 888 445555666666666 9999999999999999998 89999999999999999999999999999998754
No 19
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=6.2e-72 Score=651.29 Aligned_cols=491 Identities=20% Similarity=0.205 Sum_probs=390.0
Q ss_pred HHHhhhHHHHHHHHHHHHhccc-CCC------CCCchhh---hhHHHHHHHHHHHHHHHHHHHhhchhhhcc----ceEE
Q 002671 75 FEQFNRVANIYFLIAALLSVTP-LSP------FSPVSML---LPLAIVVGVSMAKEALEDWRRFMQDKEVNA----RKVS 140 (894)
Q Consensus 75 ~~qf~~~~n~~~l~~~il~~~~-~~~------~~~~~~~---~~l~~v~~~~~~~~~~~d~~r~k~~~~~n~----~~~~ 140 (894)
-.||++|..+.++++++++++. +.+ ..+...+ +.+++.+++..+.+.+.++|.+++.+.+.+ .+++
T Consensus 28 ~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~ 107 (679)
T PRK01122 28 RVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFAR 107 (679)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 4578899999999999999864 111 1222222 233344445555667777777776665554 3699
Q ss_pred EEeCCCe-EEEeeccccccCcEEEeecCcccCceEEEeeecCCCCcEEEEecccCCCCcceeecccccCCCCCchhhhcc
Q 002671 141 VHVGNGV-FSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKE 219 (894)
Q Consensus 141 V~~r~g~-~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~ 219 (894)
|+ |+|+ +++|++++|+|||+|.|++||.|||||+|++ |.+.||||.|||||.|+.|.+++..
T Consensus 108 vi-r~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vie-----G~a~VDESaLTGES~PV~K~~G~~~----------- 170 (679)
T PRK01122 108 KL-REPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIE-----GVASVDESAITGESAPVIRESGGDF----------- 170 (679)
T ss_pred EE-ECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEE-----ccEEEEcccccCCCCceEeCCCCcc-----------
Confidence 99 7777 9999999999999999999999999999999 6789999999999999999987431
Q ss_pred ceeEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEecccchhhh---ccCCCCCCcchHHH
Q 002671 220 FTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQ---NATTSPSKRSGIEK 296 (894)
Q Consensus 220 ~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~g~Vv~tG~~Tk~~~---~~~~~~~k~s~~~~ 296 (894)
...|+||.+++|. +.+.|+.+|.+|.+.+ ..+.++.+++|+|+
T Consensus 171 -------------~~V~aGT~v~~G~---------------------~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~ 216 (679)
T PRK01122 171 -------------SSVTGGTRVLSDW---------------------IVIRITANPGESFLDRMIALVEGAKRQKTPNEI 216 (679)
T ss_pred -------------CeEEeceEEEeee---------------------EEEEEEEecccCHHHHHHHHHHhccccCCHHHH
Confidence 1248999999887 9999999999996644 45567777899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCCCchhHHHHHHHHHHHhhccccchhhHHHH
Q 002671 297 KMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIE 376 (894)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~l~ 376 (894)
.++.+..+++.+.++++++.+.+ .||... -..+...+.+++.+|||+|+..++
T Consensus 217 al~~l~~~l~~i~l~~~~~~~~~-----------~~~~g~----------------~~~l~~~iallV~aiP~alg~l~~ 269 (679)
T PRK01122 217 ALTILLAGLTIIFLLVVATLPPF-----------AAYSGG----------------ALSITVLVALLVCLIPTTIGGLLS 269 (679)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHH-----------HHHhCc----------------hHHHHHHHHHHHHcccchhhhHHH
Confidence 88887766654444333322221 112100 125777888999999999998888
Q ss_pred HHHHHHHHHHhccccccccCCCCCeEEeccccccccccceEEEecCCCceeecceEEEEEEEcCcccCCCchHHHHHHHH
Q 002671 377 IVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAK 456 (894)
Q Consensus 377 i~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~e~Lg~v~~I~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~ 456 (894)
++...++.++ .++++++|++.++|.||++++||||||||||+|+|.+..++..+. .
T Consensus 270 ~i~i~g~~r~----------ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~-----~--------- 325 (679)
T PRK01122 270 AIGIAGMDRV----------LQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPG-----V--------- 325 (679)
T ss_pred HHHHHHHHHH----------hcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCC-----C---------
Confidence 8888888888 899999999999999999999999999999999999988753110 0
Q ss_pred hhhhchhhhhhhhhhcccCCCCCccchhhhcccCCCCccccccCCCccccccccccCCCCCCChhHHHHHHHHHhhccee
Q 002671 457 QMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTA 536 (894)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~ 536 (894)
..++++.+.++|+..
T Consensus 326 -----------------------------------------------------------------~~~~ll~~a~~~s~~ 340 (679)
T PRK01122 326 -----------------------------------------------------------------TEEELADAAQLSSLA 340 (679)
T ss_pred -----------------------------------------------------------------CHHHHHHHHHHhcCC
Confidence 001345556666443
Q ss_pred eecccCCCCCeeeecCChhHHHHHHHHHH-CCcEEEEEcCCeEEEEecCCCCCCCceeEEEEEEeecCCCCCceEEEEEE
Q 002671 537 IPELNEETGNLTYEAESPDEAAFLVAARE-FGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVR 615 (894)
Q Consensus 537 ~~~~~~~~~~~~y~~~sp~e~Alv~~a~~-~g~~~~~~~~~~i~i~~~~~~~g~~~~~~~~il~~~~F~s~rkrmsviv~ 615 (894)
+.||...|++++|+. +++... ...+...+.+||++.+|+|++.+.
T Consensus 341 --------------s~hP~~~AIv~~a~~~~~~~~~--------------------~~~~~~~~~~pF~s~~~~~gv~~~ 386 (679)
T PRK01122 341 --------------DETPEGRSIVVLAKQRFNLRER--------------------DLQSLHATFVPFSAQTRMSGVDLD 386 (679)
T ss_pred --------------CCCchHHHHHHHHHhhcCCCch--------------------hhccccceeEeecCcCceEEEEEC
Confidence 358999999999986 343210 112455678899999988887653
Q ss_pred cCCCcEEEEEccchhhhhHhhccCccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhCHHHH
Q 002671 616 DEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREAT 695 (894)
Q Consensus 616 ~~~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~ 695 (894)
| ..|+||+++.|++.|...+...++.+.+.+++++++|+|++++|+
T Consensus 387 ---g--~~~~kGa~e~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~va~----------------------------- 432 (679)
T PRK01122 387 ---G--REIRKGAVDAIRRYVESNGGHFPAELDAAVDEVARKGGTPLVVAE----------------------------- 432 (679)
T ss_pred ---C--EEEEECCHHHHHHHHHhcCCcChHHHHHHHHHHHhCCCcEEEEEE-----------------------------
Confidence 3 589999999999999766555667788888999999999999993
Q ss_pred HHHHHHhhhcccEEEEeeeecccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhh
Q 002671 696 LEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSV 775 (894)
Q Consensus 696 l~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~ 775 (894)
|++++|+++++|++|+|++++|++||++||+++|+|||++.||.+||+++||..
T Consensus 433 ----------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~---------------- 486 (679)
T PRK01122 433 ----------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD---------------- 486 (679)
T ss_pred ----------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE----------------
Confidence 568999999999999999999999999999999999999999999999999842
Q ss_pred HHHHHHHHHHhHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcchHHHHHHHHHhhccCeEEEEeCCchhHHHHHHH
Q 002671 776 GKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRL 855 (894)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~~P~qK~~iv~~ 855 (894)
++||++|+||..+|+.
T Consensus 487 ----------------------------------------------------------------v~A~~~PedK~~iV~~ 502 (679)
T PRK01122 487 ----------------------------------------------------------------FLAEATPEDKLALIRQ 502 (679)
T ss_pred ----------------------------------------------------------------EEccCCHHHHHHHHHH
Confidence 8999999999999999
Q ss_pred HhhcCCCEEEEEcCChhcHHHHHhCCccEEecCccccC
Q 002671 856 VKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGCD 893 (894)
Q Consensus 856 lk~~~~~~v~~iGDG~ND~~ml~~AdvGI~i~g~eg~q 893 (894)
+|+ .|+.|+|+|||.||+|||++|||||||+ .|+|
T Consensus 503 lQ~-~G~~VaMtGDGvNDAPALa~ADVGIAMg--sGTd 537 (679)
T PRK01122 503 EQA-EGRLVAMTGDGTNDAPALAQADVGVAMN--SGTQ 537 (679)
T ss_pred HHH-cCCeEEEECCCcchHHHHHhCCEeEEeC--CCCH
Confidence 998 8999999999999999999999999995 3654
No 20
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=2e-70 Score=637.99 Aligned_cols=487 Identities=18% Similarity=0.216 Sum_probs=369.9
Q ss_pred HHhhhHHHHHHHHHHHHhccc--CCC----CCC--chhhhhHHHHHH---HHHHHHHHHHHHHhhchhhhcc---c-eEE
Q 002671 76 EQFNRVANIYFLIAALLSVTP--LSP----FSP--VSMLLPLAIVVG---VSMAKEALEDWRRFMQDKEVNA---R-KVS 140 (894)
Q Consensus 76 ~qf~~~~n~~~l~~~il~~~~--~~~----~~~--~~~~~~l~~v~~---~~~~~~~~~d~~r~k~~~~~n~---~-~~~ 140 (894)
.+|++|..+.++++++++++. +.. ..| +..+..++++++ +..+-|.+.++|..++.+.+.+ . +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 456889989999999998864 111 111 222222222222 2223334445555555555543 2 565
Q ss_pred -EEeCCCeEEEeeccccccCcEEEeecCcccCceEEEeeecCCCCcEEEEecccCCCCcceeecccccCCCCCchhhhcc
Q 002671 141 -VHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKE 219 (894)
Q Consensus 141 -V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~ 219 (894)
|. |||++++|+.++|+|||+|.|++||.|||||+|++ |.+.||||+|||||.|+.|.++.+.
T Consensus 108 ~v~-rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vie-----G~~~VDESaLTGES~PV~K~~g~d~----------- 170 (673)
T PRK14010 108 RIK-QDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIK-----GLATVDESAITGESAPVIKESGGDF----------- 170 (673)
T ss_pred EEE-eCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEE-----cceEEecchhcCCCCceeccCCCcc-----------
Confidence 55 89999999999999999999999999999999999 7789999999999999999987211
Q ss_pred ceeEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEecccchhhh---ccCCCCCCcchHHH
Q 002671 220 FTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQ---NATTSPSKRSGIEK 296 (894)
Q Consensus 220 ~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~g~Vv~tG~~Tk~~~---~~~~~~~k~s~~~~ 296 (894)
...|+||.+.+|. +.++|+.||.+|.+.+ ..+.++.+++|+|.
T Consensus 171 -------------~~V~aGT~v~~G~---------------------~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~ 216 (673)
T PRK14010 171 -------------DNVIGGTSVASDW---------------------LEVEITSEPGHSFLDKMIGLVEGATRKKTPNEI 216 (673)
T ss_pred -------------CeeecCceeecce---------------------EEEEEEEecccCHHHHHHHHHhhccccCCHHHH
Confidence 0248999999888 9999999999996644 45567777899998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCCCchhHHHHHHHHHHHhhccccchhhHHHH
Q 002671 297 KMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIE 376 (894)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~l~ 376 (894)
.+..+...+.++.+ +++.++. .+.. |. .....+...+.+++.+||++|+..++
T Consensus 217 ~l~~l~~~l~ii~l--~~~~~~~-~~~~--------~~----------------~~~~~~~~~val~V~~IP~aL~~~~~ 269 (673)
T PRK14010 217 ALFTLLMTLTIIFL--VVILTMY-PLAK--------FL----------------NFNLSIAMLIALAVCLIPTTIGGLLS 269 (673)
T ss_pred HHHHHHHHHhHHHH--HHHHHHH-HHHh--------hc----------------cHHHHHHHHHHHHHHhhhhhHHHHHH
Confidence 77665444332221 1111111 0000 00 01134566777777889999999999
Q ss_pred HHHHHHHHHHhccccccccCCCCCeEEeccccccccccceEEEecCCCceeecceEEEEEEEcCcccCCCchHHHHHHHH
Q 002671 377 IVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAK 456 (894)
Q Consensus 377 i~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~e~Lg~v~~I~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~ 456 (894)
++...++.++ +++++++|+++++|.||.+++||||||||||+|++.+..+.... +
T Consensus 270 ~~~~~g~~r~----------ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~-----~---------- 324 (673)
T PRK14010 270 AIGIAGMDRV----------TQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVK-----S---------- 324 (673)
T ss_pred HHHHHHHHHH----------hhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCC-----C----------
Confidence 9988888888 89999999999999999999999999999999887766542100 0
Q ss_pred hhhhchhhhhhhhhhcccCCCCCccchhhhcccCCCCccccccCCCccccccccccCCCCCCChhHHHHHHHHHhhccee
Q 002671 457 QMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTA 536 (894)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~ 536 (894)
....+++...++|+..
T Consensus 325 ----------------------------------------------------------------~~~~~ll~~a~~~~~~ 340 (673)
T PRK14010 325 ----------------------------------------------------------------SSFERLVKAAYESSIA 340 (673)
T ss_pred ----------------------------------------------------------------ccHHHHHHHHHHhcCC
Confidence 0112345556666532
Q ss_pred eecccCCCCCeeeecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEEEeecCCCCCceEEEEEEc
Q 002671 537 IPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRD 616 (894)
Q Consensus 537 ~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~i~i~~~~~~~g~~~~~~~~il~~~~F~s~rkrmsviv~~ 616 (894)
+.||.+.|+++++++.|+.... .....+||++.+|+|++.+.
T Consensus 341 --------------s~~P~~~AIv~~a~~~~~~~~~-----------------------~~~~~~pF~~~~k~~gv~~~- 382 (673)
T PRK14010 341 --------------DDTPEGRSIVKLAYKQHIDLPQ-----------------------EVGEYIPFTAETRMSGVKFT- 382 (673)
T ss_pred --------------CCChHHHHHHHHHHHcCCCchh-----------------------hhcceeccccccceeEEEEC-
Confidence 3599999999999987654210 01123799999999999753
Q ss_pred CCCcEEEEEccchhhhhHhhccCccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhCHHHHH
Q 002671 617 EDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATL 696 (894)
Q Consensus 617 ~~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l 696 (894)
++ .+.|||++.++++|...+...+..+.+..++++++|+|+++++
T Consensus 383 --g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~v~------------------------------- 427 (673)
T PRK14010 383 --TR--EVYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVL------------------------------- 427 (673)
T ss_pred --CE--EEEECCHHHHHHHhhhcCCCCchHHHHHHHHHHhCCCeEEEEE-------------------------------
Confidence 33 4569999999999986544444556677788999999999887
Q ss_pred HHHHHhhhcccEEEEeeeecccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhH
Q 002671 697 EHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVG 776 (894)
Q Consensus 697 ~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~ 776 (894)
.|++++|+++++|++|+|++++|++||++||+++|+|||++.||.+||+++||..
T Consensus 428 --------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~----------------- 482 (673)
T PRK14010 428 --------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR----------------- 482 (673)
T ss_pred --------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce-----------------
Confidence 3678999999999999999999999999999999999999999999999999952
Q ss_pred HHHHHHHHHhHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcchHHHHHHHHHhhccCeEEEEeCCchhHHHHHHHH
Q 002671 777 KAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLV 856 (894)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~~P~qK~~iv~~l 856 (894)
+++|++|+||.++|+.+
T Consensus 483 ---------------------------------------------------------------v~A~~~PedK~~iV~~l 499 (673)
T PRK14010 483 ---------------------------------------------------------------FVAECKPEDKINVIREE 499 (673)
T ss_pred ---------------------------------------------------------------EEcCCCHHHHHHHHHHH
Confidence 89999999999999999
Q ss_pred hhcCCCEEEEEcCChhcHHHHHhCCccEEecCccccC
Q 002671 857 KEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGCD 893 (894)
Q Consensus 857 k~~~~~~v~~iGDG~ND~~ml~~AdvGI~i~g~eg~q 893 (894)
|+ .|+.|+|+|||.||+|+|++|||||||+ .|++
T Consensus 500 Q~-~G~~VaMtGDGvNDAPALa~ADVGIAMg--sGTd 533 (673)
T PRK14010 500 QA-KGHIVAMTGDGTNDAPALAEANVGLAMN--SGTM 533 (673)
T ss_pred Hh-CCCEEEEECCChhhHHHHHhCCEEEEeC--CCCH
Confidence 98 8999999999999999999999999995 3554
No 21
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.2e-72 Score=624.35 Aligned_cols=642 Identities=22% Similarity=0.257 Sum_probs=489.5
Q ss_pred ccCCCCCCCCeeecCCcchhhhhHHHHHHHhhhHHHHHHHHHHHHhccc--C--C------CCCCchhhhhHHHHHHHHH
Q 002671 48 KKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP--L--S------PFSPVSMLLPLAIVVGVSM 117 (894)
Q Consensus 48 ~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~--~--~------~~~~~~~~~~l~~v~~~~~ 117 (894)
.+++.+-|+|.++.+|.+.=+ ..|.+|++..+.+.+++.++++++. + + ..+.+. .+.|..+++++.
T Consensus 65 ~~~L~rdG~NaL~Ppk~t~~w---ikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~~~~~~nly~-giiL~~vv~vtg 140 (1019)
T KOG0203|consen 65 AEKLARDGPNALTPPKTTPEW---IKFLRQLFGGFSILLWIGAILCFVAYGIQASTEDDPSDDNLYL-GIVLAAVVIVTG 140 (1019)
T ss_pred HhhhccCCCCCCCCCCCChHH---HHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCCCCCCcceEE-EEEEEEEEEEEe
Confidence 346778999999999987632 5688999999999999999999864 1 1 112222 233445555565
Q ss_pred HHHHHHHHHHhh---chhhhccceEEEEeCCCeEEEeeccccccCcEEEeecCcccCceEEEeeecCCCCcEEEEecccC
Q 002671 118 AKEALEDWRRFM---QDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLD 194 (894)
Q Consensus 118 ~~~~~~d~~r~k---~~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~Lt 194 (894)
+...+++.+-.+ +.+.+-.+.++|+ |+|....+..++|+|||+|.++-|++||||++++++.+ |+||+|+||
T Consensus 141 ~~~~~qe~ks~~im~sF~~l~P~~~~Vi-Rdg~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~~g----~~vdnsslT 215 (1019)
T KOG0203|consen 141 LFSYYQEAKSSKIMDSFKNLVPQQALVI-RDGEKMTINAEELVVGDLVEVKGGDRVPADIRIISATG----CKVDNSSLT 215 (1019)
T ss_pred cCCCccchhhHHHHHHHhccchhhheee-ecceeEEechhhcccccceeeccCCcccceeEEEEecc----eeEeccccc
Confidence 555555544443 3445556899999 89999999999999999999999999999999999886 999999999
Q ss_pred CCCcceeecccccCCCCCchhhhccceeEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEe
Q 002671 195 GETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFT 274 (894)
Q Consensus 195 GEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~g~Vv~t 274 (894)
||+.|..+.+...-... . ......|.+|..++|. ++|+|++|
T Consensus 216 GesEP~~~~~~~t~~~~--------------~---Et~Ni~f~st~~veG~---------------------~~givi~t 257 (1019)
T KOG0203|consen 216 GESEPQTRSPEFTHENP--------------L---ETRNIAFFSTNCVEGT---------------------GRGIVIAT 257 (1019)
T ss_pred cccCCccCCccccccCc--------------h---hheeeeeeeeEEecce---------------------EEEEEEec
Confidence 99999998775322100 0 1122458888888888 99999999
Q ss_pred cccchhhhccC---CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCCCchh
Q 002671 275 GHDSKVMQNAT---TSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVP 351 (894)
Q Consensus 275 G~~Tk~~~~~~---~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 351 (894)
|.+|.+++... .....++++++.+++++.++..+++++.+..|++..+..+ .|
T Consensus 258 Gd~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~gy-----~~------------------- 313 (1019)
T KOG0203|consen 258 GDRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALILGY-----EW------------------- 313 (1019)
T ss_pred CCceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhhcc-----hh-------------------
Confidence 99998877654 4567789999999999999999888888877766555422 22
Q ss_pred HHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhccccccccCCCCCeEEeccccccccccceEEEecCCCceeecce
Q 002671 352 GLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQM 431 (894)
Q Consensus 352 ~~~~~~~~i~ll~~~iP~sL~v~l~i~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~e~Lg~v~~I~~DKTGTLT~n~m 431 (894)
+..+.+.+.+++.-+|.+|+++++....+-+.+| +++++++|++.+.|.||...+||+|||||||+|.|
T Consensus 314 -l~avv~~i~iivAnvPeGL~~tvTv~LtltakrM----------a~Knc~vknLeavetlGsts~I~SDktGTlTqnrM 382 (1019)
T KOG0203|consen 314 -LRAVVFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRM 382 (1019)
T ss_pred -HHHhhhhheeEEecCcCCccceehhhHHHHHHHH----------hhceeEEeeeeheeecccceeEeecceeeEEecce
Confidence 3455668889999999999999999999999998 89999999999999999999999999999999999
Q ss_pred EEEEEEEcCcccCCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCCccchhhhcccCCCCccccccCCCccccccccc
Q 002671 432 DFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMD 511 (894)
Q Consensus 432 ~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 511 (894)
+|.++|.++.....+.++.. ++..|
T Consensus 383 tVahlw~d~~i~~~d~~~~~------------------------------------------------~~~~~------- 407 (1019)
T KOG0203|consen 383 TVAHLWFDNQIHEADTTEDQ------------------------------------------------SGQSF------- 407 (1019)
T ss_pred EEEeeccCCceeeeechhhh------------------------------------------------hcccc-------
Confidence 99999987765332221100 00000
Q ss_pred cCCCCCCChhHHHHHHHHHhhcceeeecccCCCCC--eeeecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCC
Q 002671 512 GNWLKEPNVDTLLLFFRILAICHTAIPELNEETGN--LTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQ 589 (894)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~--~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~i~i~~~~~~~g~ 589 (894)
...+.....+.++..+||.+.....+.+-. -.-..+++.|.||++++...-... .
T Consensus 408 -----~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~------------------~ 464 (1019)
T KOG0203|consen 408 -----DKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSV------------------M 464 (1019)
T ss_pred -----cccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchH------------------H
Confidence 011345668899999999998875442211 112358999999999987532211 1
Q ss_pred CceeEEEEEEeecCCCCCceEEEEEEcCC---CcEEEEEccchhhhhHhhcc---------CccccHHHHHHHHHHHHhc
Q 002671 590 PVEREFKILNLLDFTSKRKRMSVIVRDED---GQILLLCKGADSIIFDRLSK---------NGRMYEEATTKLLNEYGEA 657 (894)
Q Consensus 590 ~~~~~~~il~~~~F~s~rkrmsviv~~~~---g~~~l~~KGa~~~i~~~~~~---------~~~~~~~~~~~~l~~~~~~ 657 (894)
..++.++.+..+||+|.+|..-.+.+..+ .+..+.+|||||+++++|+. .++...+.+.....++...
T Consensus 465 ~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~ 544 (1019)
T KOG0203|consen 465 ELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGL 544 (1019)
T ss_pred HHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhc
Confidence 13567788889999999999999988754 57899999999999999986 1234567778888899999
Q ss_pred CCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhCHHHHHHHHHHhhhcccEEEEeeeecccccCChHHHHHHHHHcCCeE
Q 002671 658 GLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKI 737 (894)
Q Consensus 658 Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv 737 (894)
|-||+.+|++.+++++|.+.-+ |+- .. . +.--.+|.|+|++++-||+|..+|+++..||.|||||
T Consensus 545 GerVlgF~~~~l~~~~~p~~~~-f~~--d~-----------~-n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkv 609 (1019)
T KOG0203|consen 545 GERVLGFCDLELPDEKFPRGFQ-FDT--DD-----------V-NFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKV 609 (1019)
T ss_pred chHHHHHHHHhcchhcCCCceE-eec--CC-----------C-CCcchhccccchhhccCCCcccCchhhhhhhhhCceE
Confidence 9999999999999876654211 000 00 0 1112589999999999999999999999999999999
Q ss_pred EEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhhhhhhccCCCCCceEEEEeCchh
Q 002671 738 WVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTL 817 (894)
Q Consensus 738 ~~lTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l 817 (894)
+|+|||++.||.+||++.||+....+...- +..+..-.. ...++....+.|+.|..|
T Consensus 610 imVTgdhpiTAkAiA~~vgIi~~~~et~e~-------------------~a~r~~~~v----~~vn~~~a~a~VihG~eL 666 (1019)
T KOG0203|consen 610 IMVTGDHPITAKAIAKSVGIISEGSETVED-------------------IAKRLNIPV----EQVNSRDAKAAVIHGSEL 666 (1019)
T ss_pred EEEecCccchhhhhhhheeeecCCchhhhh-------------------hHHhcCCcc----cccCccccceEEEecccc
Confidence 999999999999999999998765332110 000000000 011233357899999999
Q ss_pred hhhcchHHHHHHHHHhhccCeEEEEeCCchhHHHHHHHHhhcCCCEEEEEcCChhcHHHHHhCCccEEe--cCcccc
Q 002671 818 AYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGI--SGVEGC 892 (894)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~vv~~r~~P~qK~~iv~~lk~~~~~~v~~iGDG~ND~~ml~~AdvGI~i--~g~eg~ 892 (894)
..+..+ ++.++..+...+||||.||+||..||+..|+ .|.+|+.+|||.||+||||.||||||| +|++.+
T Consensus 667 ~~~~~~----qld~il~nh~eIVFARTSPqQKLiIVe~cQr-~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvs 738 (1019)
T KOG0203|consen 667 PDMSSE----QLDELLQNHQEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVS 738 (1019)
T ss_pred cccCHH----HHHHHHHhCCceEEEecCccceEEeEhhhhh-cCcEEEEeCCCcCCChhhcccccceeeccccchHH
Confidence 876554 3445556667789999999999999999998 899999999999999999999999988 455543
No 22
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=1.6e-68 Score=621.09 Aligned_cols=489 Identities=18% Similarity=0.241 Sum_probs=384.7
Q ss_pred HHHhhhHHHHHHHHHHHHhccc-CCC-------C--CCchhh--hhHHHHHHHHHHHHHHHHHHHhhchhhhcc---c-e
Q 002671 75 FEQFNRVANIYFLIAALLSVTP-LSP-------F--SPVSML--LPLAIVVGVSMAKEALEDWRRFMQDKEVNA---R-K 138 (894)
Q Consensus 75 ~~qf~~~~n~~~l~~~il~~~~-~~~-------~--~~~~~~--~~l~~v~~~~~~~~~~~d~~r~k~~~~~n~---~-~ 138 (894)
-.||++|..+.++++++++++. +.+ . .|+... +.+++.+++..+.+.+.++|.+++.+.+.+ . .
T Consensus 27 ~~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~ 106 (675)
T TIGR01497 27 KAQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTF 106 (675)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCce
Confidence 3578899989999999998764 211 1 244332 223344556666677888888887766654 2 4
Q ss_pred EEEEeCCCeEEEeeccccccCcEEEeecCcccCceEEEeeecCCCCcEEEEecccCCCCcceeecccccCCCCCchhhhc
Q 002671 139 VSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFK 218 (894)
Q Consensus 139 ~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~ 218 (894)
++|+++||++++|+.++|+|||+|.|++||.|||||+|++ |.+.||||+|||||.|+.|.+++...
T Consensus 107 a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vie-----G~~~VDESaLTGES~PV~K~~g~~~~--------- 172 (675)
T TIGR01497 107 AKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIE-----GVASVDESAITGESAPVIKESGGDFA--------- 172 (675)
T ss_pred EEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEE-----ccEEEEcccccCCCCceeecCCCCcc---------
Confidence 7787458999999999999999999999999999999999 77999999999999999999875320
Q ss_pred cceeEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEecccchhh---hccCCCCCCcchHH
Q 002671 219 EFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVM---QNATTSPSKRSGIE 295 (894)
Q Consensus 219 ~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~g~Vv~tG~~Tk~~---~~~~~~~~k~s~~~ 295 (894)
..|+||.+.+|. +.+.|+.+|.+|.+. ...+.++.+++|+|
T Consensus 173 ---------------~V~aGT~v~~G~---------------------~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq 216 (675)
T TIGR01497 173 ---------------SVTGGTRILSDW---------------------LVVECTANPGETFLDRMIALVEGAQRRKTPNE 216 (675)
T ss_pred ---------------eeecCcEEEeeE---------------------EEEEEEEecccCHHHHHHHHHHhcccCCChHH
Confidence 148899888887 999999999999654 44456777789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCCCchhHHHHHHHHHHHhhccccchhhHHH
Q 002671 296 KKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSI 375 (894)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~l 375 (894)
..++.+..++.++.++++++ ++.+.. | . . ....+...+.+++++|||+|....
T Consensus 217 ~~l~~l~~~l~~v~li~~~~---~~~~~~-------~-~----------~------~~~~~~~lvallV~aiP~aLg~l~ 269 (675)
T TIGR01497 217 IALTILLIALTLVFLLVTAT---LWPFAA-------Y-G----------G------NAISVTVLVALLVCLIPTTIGGLL 269 (675)
T ss_pred HHHHHHHHHHHHHHHHHHHH---HHHHHH-------h-c----------C------hhHHHHHHHHHHHHhCchhhhhHH
Confidence 88888766554433333221 111100 0 0 0 012455668889999999887666
Q ss_pred HHHHHHHHHHHhccccccccCCCCCeEEeccccccccccceEEEecCCCceeecceEEEEEEEcCcccCCCchHHHHHHH
Q 002671 376 EIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAA 455 (894)
Q Consensus 376 ~i~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~e~Lg~v~~I~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~ 455 (894)
..+...++.++ .+.++++|+..++|.||++++||||||||||+|+|++..++..+. .
T Consensus 270 ~av~iag~~r~----------ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~-----~-------- 326 (675)
T TIGR01497 270 SAIGIAGMDRV----------LGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQG-----V-------- 326 (675)
T ss_pred HHHHHHHHHHH----------HHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCC-----C--------
Confidence 66666777777 889999999999999999999999999999999999998753110 0
Q ss_pred HhhhhchhhhhhhhhhcccCCCCCccchhhhcccCCCCccccccCCCccccccccccCCCCCCChhHHHHHHHHHhhcce
Q 002671 456 KQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHT 535 (894)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~ 535 (894)
...+++...++|+.
T Consensus 327 ------------------------------------------------------------------~~~~ll~~aa~~~~ 340 (675)
T TIGR01497 327 ------------------------------------------------------------------DEKTLADAAQLASL 340 (675)
T ss_pred ------------------------------------------------------------------cHHHHHHHHHHhcC
Confidence 01135556666643
Q ss_pred eeecccCCCCCeeeecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEEEeecCCCCCceEEEEEE
Q 002671 536 AIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVR 615 (894)
Q Consensus 536 ~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~i~i~~~~~~~g~~~~~~~~il~~~~F~s~rkrmsviv~ 615 (894)
. +.||.+.|++++|++.|..... ..++..+..||++.+++|++.+.
T Consensus 341 ~--------------s~hP~a~Aiv~~a~~~~~~~~~--------------------~~~~~~~~~pf~~~~~~sg~~~~ 386 (675)
T TIGR01497 341 A--------------DDTPEGKSIVILAKQLGIREDD--------------------VQSLHATFVEFTAQTRMSGINLD 386 (675)
T ss_pred C--------------CCCcHHHHHHHHHHHcCCCccc--------------------cccccceEEEEcCCCcEEEEEEe
Confidence 2 3699999999999987754211 12234567899999887776553
Q ss_pred cCCCcEEEEEccchhhhhHhhccCccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhCHHHH
Q 002671 616 DEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREAT 695 (894)
Q Consensus 616 ~~~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~ 695 (894)
+| ..+.||+++.+++.|...+...+..+.+.+++++++|+|++++|+
T Consensus 387 --~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~G~r~l~va~----------------------------- 433 (675)
T TIGR01497 387 --NG--RMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVCE----------------------------- 433 (675)
T ss_pred --CC--eEEEECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhCCCeEEEEEE-----------------------------
Confidence 34 579999999999998765555566778888999999999999994
Q ss_pred HHHHHHhhhcccEEEEeeeecccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhh
Q 002671 696 LEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSV 775 (894)
Q Consensus 696 l~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~ 775 (894)
|.+++|+++++|++|++++++|++|+++||+++|+|||+..||.++|+++|+..
T Consensus 434 ----------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~---------------- 487 (675)
T TIGR01497 434 ----------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD---------------- 487 (675)
T ss_pred ----------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE----------------
Confidence 457999999999999999999999999999999999999999999999999842
Q ss_pred HHHHHHHHHHhHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcchHHHHHHHHHhhccCeEEEEeCCchhHHHHHHH
Q 002671 776 GKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRL 855 (894)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~~P~qK~~iv~~ 855 (894)
+++|++|+||..+|+.
T Consensus 488 ----------------------------------------------------------------v~a~~~PedK~~~v~~ 503 (675)
T TIGR01497 488 ----------------------------------------------------------------FIAEATPEDKIALIRQ 503 (675)
T ss_pred ----------------------------------------------------------------EEcCCCHHHHHHHHHH
Confidence 7899999999999999
Q ss_pred HhhcCCCEEEEEcCChhcHHHHHhCCccEEec
Q 002671 856 VKEGTGKTTLAIGDGANDVGMIQEADIGIGIS 887 (894)
Q Consensus 856 lk~~~~~~v~~iGDG~ND~~ml~~AdvGI~i~ 887 (894)
+|+ .|+.|+|+|||.||+|||++|||||+|+
T Consensus 504 lq~-~g~~VamvGDG~NDapAL~~AdvGiAm~ 534 (675)
T TIGR01497 504 EQA-EGKLVAMTGDGTNDAPALAQADVGVAMN 534 (675)
T ss_pred HHH-cCCeEEEECCCcchHHHHHhCCEeEEeC
Confidence 998 7899999999999999999999999995
No 23
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.4e-71 Score=609.05 Aligned_cols=641 Identities=21% Similarity=0.283 Sum_probs=449.5
Q ss_pred CCCCCCeeecCCcchhhhhHHHHHHHhhhHHHHHHHHHHHHhcccCCCCCCchhhhhHHHHHHHHHHHHHHHHHHHhhch
Q 002671 52 LKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQD 131 (894)
Q Consensus 52 ~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~d~~r~k~~ 131 (894)
.+||.|......+++- ..|.+.-..|+.+|..+...+|..- ..||.+++.|++++.+ |+---++|.+..
T Consensus 174 ~~~G~N~fdi~vPtF~----eLFkE~A~aPfFVFQVFcvgLWCLD---eyWYySlFtLfMli~f----E~tlV~Qrm~~l 242 (1160)
T KOG0209|consen 174 HKYGKNKFDIVVPTFS----ELFKEHAVAPFFVFQVFCVGLWCLD---EYWYYSLFTLFMLIAF----EATLVKQRMRTL 242 (1160)
T ss_pred HHhcCCccccCCccHH----HHHHHhccCceeeHhHHhHHHHHhH---HHHHHHHHHHHHHHHH----HHHHHHHHHHHH
Confidence 3599999999999875 6677778888888888888888864 5677777666555443 444445555554
Q ss_pred hhh---c--cceEEEEeCCCeEEEeeccccccCcEEEeec---CcccCceEEEeeecCCCCcEEEEecccCCCCcceeec
Q 002671 132 KEV---N--ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEK---DQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKR 203 (894)
Q Consensus 132 ~~~---n--~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~---ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~~~~K~ 203 (894)
.+. . +..+.|+ |+++|+.+...+|.|||+|.|.. ...+|||++||. |.|.|||++|||||.|..|.
T Consensus 243 se~R~Mg~kpy~I~v~-R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~-----GsciVnEaMLtGESvPl~KE 316 (1160)
T KOG0209|consen 243 SEFRTMGNKPYTINVY-RNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLR-----GSCIVNEAMLTGESVPLMKE 316 (1160)
T ss_pred HHHHhcCCCceEEEEE-ecCcceeccccccCCCceEEeccCcccCcCCceEEEEe-----cceeechhhhcCCCcccccc
Confidence 433 2 3568889 89999999999999999999987 678999999999 88999999999999999999
Q ss_pred ccccCCCCCchhhhccceeEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeecceEeec-CCeEEEEEEEecccchhhh
Q 002671 204 AMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRN-TAHVYGSVIFTGHDSKVMQ 282 (894)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~n-t~~~~g~Vv~tG~~Tk~~~ 282 (894)
++.... .+. .+..+..+.....|.||.++.-..- .-+.++. .+-+.+.|++||.+|..+.
T Consensus 317 ~Ie~~~----~d~------~ld~~~d~k~hVlfGGTkivQht~p---------~~~slk~pDggc~a~VlrTGFeTSQGk 377 (1160)
T KOG0209|consen 317 SIELRD----SDD------ILDIDRDDKLHVLFGGTKIVQHTPP---------KKASLKTPDGGCVAYVLRTGFETSQGK 377 (1160)
T ss_pred ccccCC----hhh------hcccccccceEEEEcCceEEEecCC---------ccccccCCCCCeEEEEEeccccccCCc
Confidence 886542 111 2223334445567888887742110 0011221 3458999999999996665
Q ss_pred ccCCC---CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc--CCCccccCCCCCccccCCCCCchhHHHHHH
Q 002671 283 NATTS---PSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQ--TPQWWYLKPKETDVYFNPGKPLVPGLAHLV 357 (894)
Q Consensus 283 ~~~~~---~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~--~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~ 357 (894)
..+.. ..+-+.- |+-..+++.++++++++.+ +++|..-. ....-| .-|+
T Consensus 378 LvRtilf~aervTaN----n~Etf~FILFLlVFAiaAa--~Yvwv~Gskd~~RsrY--------------------KL~L 431 (1160)
T KOG0209|consen 378 LVRTILFSAERVTAN----NRETFIFILFLLVFAIAAA--GYVWVEGSKDPTRSRY--------------------KLFL 431 (1160)
T ss_pred eeeeEEecceeeeec----cHHHHHHHHHHHHHHHHhh--heEEEecccCcchhhh--------------------heee
Confidence 55432 1222211 2233344455555555543 22232111 001111 3466
Q ss_pred HHHHHhhccccchhhHHHHHHHHHHHHHHhccccccccCCCCCeEEeccccccccccceEEEecCCCceeecceEEEEEE
Q 002671 358 TALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCS 437 (894)
Q Consensus 358 ~~i~ll~~~iP~sL~v~l~i~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~e~Lg~v~~I~~DKTGTLT~n~m~~~~~~ 437 (894)
-++.++...||.-||+-++++--.+..-+ ++.++.|..+-.+.-.|+||..|||||||||+..|.|.++-
T Consensus 432 eC~LIlTSVvPpELPmELSmAVNsSL~AL----------ak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gva 501 (1160)
T KOG0209|consen 432 ECTLILTSVVPPELPMELSMAVNSSLIAL----------AKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVA 501 (1160)
T ss_pred eeeEEEeccCCCCCchhhhHHHHHHHHHH----------HHhceeecCccccccCCceeEEEecCCCccccccEEEEecc
Confidence 68888999999999998887765555555 78899999999999999999999999999999999999763
Q ss_pred EcCcccCCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCCccchhhhcccCCCCccccccCCCccccccccccCCCCC
Q 002671 438 VAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKE 517 (894)
Q Consensus 438 i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (894)
|..-... . . .
T Consensus 502 --g~~~~~~--~-------------------------------~-----------------------------------~ 511 (1160)
T KOG0209|consen 502 --GLSADEG--A-------------------------------L-----------------------------------T 511 (1160)
T ss_pred --cccCCcc--c-------------------------------c-----------------------------------c
Confidence 2110000 0 0 0
Q ss_pred CChhHHHHHHHHHhhcceeeecccCCCCCeeeecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEE
Q 002671 518 PNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKI 597 (894)
Q Consensus 518 ~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~i~i~~~~~~~g~~~~~~~~i 597 (894)
+-.+.-.+-...+|.||+...-.++ ..++|.|+|.+++ .||.+...+. ..+..|+ ....+|
T Consensus 512 ~~s~~p~~t~~vlAscHsLv~le~~-------lVGDPlEKA~l~~---v~W~~~k~~~-------v~p~~~~--~~~lkI 572 (1160)
T KOG0209|consen 512 PASKAPNETVLVLASCHSLVLLEDK-------LVGDPLEKATLEA---VGWNLEKKNS-------VCPREGN--GKKLKI 572 (1160)
T ss_pred chhhCCchHHHHHHHHHHHHHhcCc-------ccCChHHHHHHHh---cCcccccCcc-------cCCCcCC--Ccccch
Confidence 0000111456789999999765433 3589999999975 5666544221 1111121 236788
Q ss_pred EEeecCCCCCceEEEEEEcCC----CcEEEEEccchhhhhHhhccCccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHH
Q 002671 598 LNLLDFTSKRKRMSVIVRDED----GQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESE 673 (894)
Q Consensus 598 l~~~~F~s~rkrmsviv~~~~----g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e 673 (894)
.+.+.|+|..|||||++.... -++++.+|||||+|.+++.. .+..+.+...+|+.+|.|||+++||.+..--
T Consensus 573 ~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~d----vP~dY~~iYk~ytR~GsRVLALg~K~l~~~~ 648 (1160)
T KOG0209|consen 573 IQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRD----VPKDYDEIYKRYTRQGSRVLALGYKPLGDMM 648 (1160)
T ss_pred hhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHh----CchhHHHHHHHHhhccceEEEEecccccccc
Confidence 999999999999999998632 36899999999999999876 5667778888999999999999999987321
Q ss_pred HHHHHHHHHHHHhhhhhCHHHHHHHHHHhhhcccEEEEeeeecccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHH
Q 002671 674 YSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGF 753 (894)
Q Consensus 674 ~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~ 753 (894)
-++ ++ +.+| +.+|+||+|.|++.|.-|||++++++|+.|++++++++|+|||++.||.++|+
T Consensus 649 ~~q-------~r---d~~R--------e~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak 710 (1160)
T KOG0209|consen 649 VSQ-------VR---DLKR--------EDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAK 710 (1160)
T ss_pred hhh-------hh---hhhh--------hhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehh
Confidence 110 00 0233 78899999999999999999999999999999999999999999999999999
Q ss_pred hccccccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcchHHHHHHHHHh
Q 002671 754 ACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLA 833 (894)
Q Consensus 754 ~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~ 833 (894)
++|+......++...+...+.. -.+....+.+...+..... +..-...+.+.++|..|+++...+. +.++.
T Consensus 711 ~v~iv~k~~~vl~~~~~~~~~~--~~w~s~d~t~~lp~~p~~~----~~~l~~~~dlcitG~~l~~l~~~~~---l~~l~ 781 (1160)
T KOG0209|consen 711 EVGIVEKPTLVLDLPEEGDGNQ--LEWVSVDGTIVLPLKPGKK----KTLLAETHDLCITGSALDHLQATDQ---LRRLI 781 (1160)
T ss_pred eeeeeccCceeeccCccCCCce--eeEecCCCceeecCCCCcc----chhhhhhhhhhcchhHHHHHhhhHH---HHHhh
Confidence 9999987544444433311100 0000000000000000000 0002345678999999999887663 33333
Q ss_pred hccCeEEEEeCCchhHHHHHHHHhhcCCCEEEEEcCChhcHHHHHhCCccEEec
Q 002671 834 VECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS 887 (894)
Q Consensus 834 ~~~~~vv~~r~~P~qK~~iv~~lk~~~~~~v~~iGDG~ND~~ml~~AdvGI~i~ 887 (894)
.+ +-||||+.|.||..++..+|+ .|+.|+|||||.||++||++||||||+-
T Consensus 782 ~h--v~VfARvaP~QKE~ii~tlK~-~Gy~TLMCGDGTNDVGALK~AhVGVALL 832 (1160)
T KOG0209|consen 782 PH--VWVFARVAPKQKEFIITTLKK-LGYVTLMCGDGTNDVGALKQAHVGVALL 832 (1160)
T ss_pred hh--eeEEEeeChhhHHHHHHHHHh-cCeEEEEecCCCcchhhhhhcccceehh
Confidence 33 339999999999999999998 9999999999999999999999999973
No 24
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=8.7e-63 Score=574.16 Aligned_cols=425 Identities=34% Similarity=0.487 Sum_probs=357.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhchhhhccceEEEEeCCCeEEEeeccccccCcEEEeecCcccCceEEEeeecCCCCc
Q 002671 106 LLPLAIVVGVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGI 185 (894)
Q Consensus 106 ~~~l~~v~~~~~~~~~~~d~~r~k~~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~ 185 (894)
++++++.++-...+...++..+...+..+++++++|+ |+| ++.|++++|+|||+|.|++||.|||||+|++ |.
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~-r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~-----g~ 76 (499)
T TIGR01494 4 ILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVL-RNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLS-----GS 76 (499)
T ss_pred EhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEE-ECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEE-----cc
Confidence 4555555555666666667776666666888999999 788 9999999999999999999999999999999 77
Q ss_pred EEEEecccCCCCcceeecccccCCCCCchhhhccceeEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeecceEeecCC
Q 002671 186 CYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTA 265 (894)
Q Consensus 186 ~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~ 265 (894)
|.||||+|||||.|+.|++++.. |+|+.+.+|.
T Consensus 77 ~~vdes~LTGEs~pv~k~~g~~v---------------------------~~gs~~~~G~-------------------- 109 (499)
T TIGR01494 77 CFVDESNLTGESVPVLKTAGDAV---------------------------FAGTYVFNGT-------------------- 109 (499)
T ss_pred EEEEcccccCCCCCeeeccCCcc---------------------------ccCcEEeccE--------------------
Confidence 99999999999999999987655 7888888888
Q ss_pred eEEEEEEEecccchh---hhccCCCCCCcchHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCcc
Q 002671 266 HVYGSVIFTGHDSKV---MQNATTSPSKRSGIEKKMDKII-FILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDV 341 (894)
Q Consensus 266 ~~~g~Vv~tG~~Tk~---~~~~~~~~~k~s~~~~~~~~~~-~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~yl~~~~~~~ 341 (894)
+...|..+|.+|.. ..........++++++..+++. .+++++.++++++.++++..+.... .
T Consensus 110 -~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~~--~----------- 175 (499)
T TIGR01494 110 -LIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGLWDP--N----------- 175 (499)
T ss_pred -EEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc--c-----------
Confidence 88899999999854 3333445555789999999998 6777777777777766654321100 0
Q ss_pred ccCCCCCchhHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhccccccccCCCCCeEEeccccccccccceEEEec
Q 002671 342 YFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSD 421 (894)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~l~i~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~e~Lg~v~~I~~D 421 (894)
.+...|.+++.+++.+|||+|+++++++...+..++ +++++++|+++.+|+||+++++|||
T Consensus 176 ---------~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~----------~~~gilvk~~~~lE~l~~v~~i~fD 236 (499)
T TIGR01494 176 ---------SIFKIFLRALILLVIAIPIALPLAVTIALAVGDARL----------AKKGIVVRSLNALEELGKVDYICSD 236 (499)
T ss_pred ---------cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH----------HHCCcEEechhhhhhccCCcEEEee
Confidence 123588999999999999999999999999998888 7889999999999999999999999
Q ss_pred CCCceeecceEEEEEEEcCcccCCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCCccchhhhcccCCCCccccccCC
Q 002671 422 KTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKG 501 (894)
Q Consensus 422 KTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 501 (894)
||||||+|+|+|.++++.+.
T Consensus 237 KTGTLT~~~~~v~~~~~~~~------------------------------------------------------------ 256 (499)
T TIGR01494 237 KTGTLTKNEMSFKKVSVLGG------------------------------------------------------------ 256 (499)
T ss_pred CCCccccCceEEEEEEecCC------------------------------------------------------------
Confidence 99999999999998864321
Q ss_pred CccccccccccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCCeeeecCChhHHHHHHHHHHCCcEEEEEcCCeEEEE
Q 002671 502 FNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIR 581 (894)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~i~i~ 581 (894)
++.++||+|.|++++++..+
T Consensus 257 ----------------------------------------------~~~s~hp~~~ai~~~~~~~~-------------- 276 (499)
T TIGR01494 257 ----------------------------------------------EYLSGHPDERALVKSAKWKI-------------- 276 (499)
T ss_pred ----------------------------------------------CcCCCChHHHHHHHHhhhcC--------------
Confidence 01257999999999986411
Q ss_pred ecCCCCCCCceeEEEEEEeecCCCCCceEEEEEEcCCCcEEEEEccchhhhhHhhccCccccHHHHHHHHHHHHhcCCeE
Q 002671 582 ERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRT 661 (894)
Q Consensus 582 ~~~~~~g~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~ 661 (894)
+...||++.+++|+++++.+++ .|+||+++.|.+.|.. +.+.++.++.+|+|+
T Consensus 277 ----------------~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~--------~~~~~~~~~~~g~~~ 329 (499)
T TIGR01494 277 ----------------LNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD--------LEEKVKELAQSGLRV 329 (499)
T ss_pred ----------------cceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH--------HHHHHHHHHhCCCEE
Confidence 1357999999999999986433 4789999999988752 233455688899999
Q ss_pred EEEEEEeCCHHHHHHHHHHHHHHHhhhhhCHHHHHHHHHHhhhcccEEEEeeeecccccCChHHHHHHHHHcCCeEEEEc
Q 002671 662 LALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLT 741 (894)
Q Consensus 662 l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~~lT 741 (894)
+++|++. +++|+++++|++|++++++|+.|+++|+++||+|
T Consensus 330 ~~~a~~~---------------------------------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~lt 370 (499)
T TIGR01494 330 LAVASKE---------------------------------------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLT 370 (499)
T ss_pred EEEEECC---------------------------------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEc
Confidence 9999642 6899999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhc
Q 002671 742 GDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYAL 821 (894)
Q Consensus 742 GD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~ 821 (894)
||++.+|..+|+++|+
T Consensus 371 GD~~~~a~~ia~~lgi---------------------------------------------------------------- 386 (499)
T TIGR01494 371 GDNVLTAKAIAKELGI---------------------------------------------------------------- 386 (499)
T ss_pred CCCHHHHHHHHHHcCc----------------------------------------------------------------
Confidence 9999999999999874
Q ss_pred chHHHHHHHHHhhccCeEEEEeCCchhHHHHHHHHhhcCCCEEEEEcCChhcHHHHHhCCccEEec
Q 002671 822 EDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS 887 (894)
Q Consensus 822 ~~~~~~~~~~~~~~~~~vv~~r~~P~qK~~iv~~lk~~~~~~v~~iGDG~ND~~ml~~AdvGI~i~ 887 (894)
+++++|+||+.+|+.+|+ .|+.|+|+|||.||++||++|||||+|+
T Consensus 387 -------------------~~~~~p~~K~~~v~~l~~-~g~~v~~vGDg~nD~~al~~Advgia~~ 432 (499)
T TIGR01494 387 -------------------FARVTPEEKAALVEALQK-KGRVVAMTGDGVNDAPALKKADVGIAMG 432 (499)
T ss_pred -------------------eeccCHHHHHHHHHHHHH-CCCEEEEECCChhhHHHHHhCCCccccc
Confidence 467899999999999997 7899999999999999999999999995
No 25
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-61 Score=563.62 Aligned_cols=441 Identities=23% Similarity=0.300 Sum_probs=357.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhchhhhc------cceEEEEeCCCeEEEeeccccccCcEEEeecCcccCceEEEeeecCC
Q 002671 109 LAIVVGVSMAKEALEDWRRFMQDKEVN------ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYE 182 (894)
Q Consensus 109 l~~v~~~~~~~~~~~d~~r~k~~~~~n------~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~ 182 (894)
-.+++++..+.+++|++.+.++.+.+. .++++++++||+.++|+.++|+|||+|.|++||+||+||+|++
T Consensus 177 aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~---- 252 (713)
T COG2217 177 AAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVS---- 252 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEe----
Confidence 345566677889999999888755443 4788787566779999999999999999999999999999999
Q ss_pred CCcEEEEecccCCCCcceeecccccCCCCCchhhhccceeEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeecceEee
Q 002671 183 DGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLR 262 (894)
Q Consensus 183 ~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~ 262 (894)
|...||||+|||||.|+.|.+++.. |+||++.+|.
T Consensus 253 -G~s~vDeS~iTGEs~PV~k~~Gd~V---------------------------~aGtiN~~G~----------------- 287 (713)
T COG2217 253 -GSSSVDESMLTGESLPVEKKPGDEV---------------------------FAGTVNLDGS----------------- 287 (713)
T ss_pred -CcEEeecchhhCCCCCEecCCCCEE---------------------------eeeEEECCcc-----------------
Confidence 8899999999999999999999877 9999999998
Q ss_pred cCCeEEEEEEEecccchh---hhccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCC
Q 002671 263 NTAHVYGSVIFTGHDSKV---MQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKET 339 (894)
Q Consensus 263 nt~~~~g~Vv~tG~~Tk~---~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~yl~~~~~ 339 (894)
+...|+.+|.||.+ .+..+.++..++++|+..|++..+++++.++++++++++|.++... .|
T Consensus 288 ----l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~~----~~------- 352 (713)
T COG2217 288 ----LTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGGG----DW------- 352 (713)
T ss_pred ----EEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcCC----cH-------
Confidence 99999999999955 5556688999999999999999999999999999988866554321 12
Q ss_pred ccccCCCCCchhHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhccccccccCCCCCeEEeccccccccccceEEE
Q 002671 340 DVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTIL 419 (894)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~l~i~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~e~Lg~v~~I~ 419 (894)
-..|.+++.++++.|||+|.++.+++.+.+..+. +++|+++|+.+.+|.|+++|+|+
T Consensus 353 -------------~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~a----------A~~GILiK~g~~LE~l~~v~tvv 409 (713)
T COG2217 353 -------------ETALYRALAVLVIACPCALGLATPTAILVGIGRA----------ARRGILIKGGEALERLAKVDTVV 409 (713)
T ss_pred -------------HHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHH----------HhCceEEeChHHHHhhccCCEEE
Confidence 2478899999999999999999999999999988 89999999999999999999999
Q ss_pred ecCCCceeecceEEEEEEEcCcccCCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCCccchhhhcccCCCCcccccc
Q 002671 420 SDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRI 499 (894)
Q Consensus 420 ~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 499 (894)
||||||||+|++++..+...+. +.+
T Consensus 410 FDKTGTLT~G~p~v~~v~~~~~----~e~--------------------------------------------------- 434 (713)
T COG2217 410 FDKTGTLTEGKPEVTDVVALDG----DED--------------------------------------------------- 434 (713)
T ss_pred EeCCCCCcCCceEEEEEecCCC----CHH---------------------------------------------------
Confidence 9999999999999998864221 101
Q ss_pred CCCccccccccccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCCeeeecCChhHHHHHHHHHHCCcEEEEEcCCeEE
Q 002671 500 KGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVF 579 (894)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~i~ 579 (894)
+++...+ ..+..++||..+|++++|+..|..-.. .
T Consensus 435 -------------------------~~L~laA--------------alE~~S~HPiA~AIv~~a~~~~~~~~~----~-- 469 (713)
T COG2217 435 -------------------------ELLALAA--------------ALEQHSEHPLAKAIVKAAAERGLPDVE----D-- 469 (713)
T ss_pred -------------------------HHHHHHH--------------HHHhcCCChHHHHHHHHHHhcCCCCcc----c--
Confidence 2222222 112336899999999999987621111 0
Q ss_pred EEecCCCCCCCceeEEEEEEeecCCCCCceEEEEEEcCCCcEEEEEccchhhhhHhhccCccccHHHHHHHHHHHHhcCC
Q 002671 580 IRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGL 659 (894)
Q Consensus 580 i~~~~~~~g~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Gl 659 (894)
+++.. |. -..-.+ +| ..+.-|.+..+.+. +..... .....+.+..+|.
T Consensus 470 ~~~i~---G~-------------------Gv~~~v---~g--~~v~vG~~~~~~~~----~~~~~~-~~~~~~~~~~~G~ 517 (713)
T COG2217 470 FEEIP---GR-------------------GVEAEV---DG--ERVLVGNARLLGEE----GIDLPL-LSERIEALESEGK 517 (713)
T ss_pred eeeec---cC-------------------cEEEEE---CC--EEEEEcCHHHHhhc----CCCccc-hhhhHHHHHhcCC
Confidence 11100 11 111111 23 34455776554322 111111 4556777888999
Q ss_pred eEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhCHHHHHHHHHHhhhcccEEEEeeeecccccCChHHHHHHHHHcCCeEEE
Q 002671 660 RTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWV 739 (894)
Q Consensus 660 r~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~~ 739 (894)
.++.++. |-+++|+++++|++|++++++|++||+.||++.|
T Consensus 518 t~v~va~---------------------------------------dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~m 558 (713)
T COG2217 518 TVVFVAV---------------------------------------DGKLVGVIALADELRPDAKEAIAALKALGIKVVM 558 (713)
T ss_pred eEEEEEE---------------------------------------CCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEE
Confidence 9888883 5589999999999999999999999999999999
Q ss_pred EcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhhhhhhccCCCCCceEEEEeCchhhh
Q 002671 740 LTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAY 819 (894)
Q Consensus 740 lTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~ 819 (894)
||||+..+|..||+++||..
T Consensus 559 LTGDn~~~A~~iA~~lGId~------------------------------------------------------------ 578 (713)
T COG2217 559 LTGDNRRTAEAIAKELGIDE------------------------------------------------------------ 578 (713)
T ss_pred EcCCCHHHHHHHHHHcChHh------------------------------------------------------------
Confidence 99999999999999999942
Q ss_pred hcchHHHHHHHHHhhccCeEEEEeCCchhHHHHHHHHhhcCCCEEEEEcCChhcHHHHHhCCccEEecC
Q 002671 820 ALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISG 888 (894)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~vv~~r~~P~qK~~iv~~lk~~~~~~v~~iGDG~ND~~ml~~AdvGI~i~g 888 (894)
+++.+.|++|+++|+.+|+ .|++|+|+|||.||+|+|.+|||||||++
T Consensus 579 --------------------v~AellPedK~~~V~~l~~-~g~~VamVGDGINDAPALA~AdVGiAmG~ 626 (713)
T COG2217 579 --------------------VRAELLPEDKAEIVRELQA-EGRKVAMVGDGINDAPALAAADVGIAMGS 626 (713)
T ss_pred --------------------heccCCcHHHHHHHHHHHh-cCCEEEEEeCCchhHHHHhhcCeeEeecC
Confidence 8899999999999999997 89999999999999999999999999964
No 26
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-61 Score=525.22 Aligned_cols=558 Identities=20% Similarity=0.239 Sum_probs=423.8
Q ss_pred cccCCCCCCCCeeecCCcchhhhhHHHHHHHhhhHHHHHHHHHHHHhccc----CCCCCCchhhhhHHHHHHHHHHHHHH
Q 002671 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP----LSPFSPVSMLLPLAIVVGVSMAKEAL 122 (894)
Q Consensus 47 ~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~----~~~~~~~~~~~~l~~v~~~~~~~~~~ 122 (894)
..+|++.||.|++...|.+.+ .-|+.-|..|..|..-.++++.... -.|-+|..+..+ ...+++++...++
T Consensus 42 ~~eRlk~fG~NkleEkken~~----lKFl~Fm~~PlswVMEaAAimA~~Lang~~~~~DW~DF~gI-~~LLliNsti~Fv 116 (942)
T KOG0205|consen 42 VEERLKIFGPNKLEEKKESKF----LKFLGFMWNPLSWVMEAAAIMAIGLANGGGRPPDWQDFVGI-CCLLLINSTISFI 116 (942)
T ss_pred HHHHHHhhCchhhhhhhhhHH----HHHHHHHhchHHHHHHHHHHHHHHHhcCCCCCcchhhhhhh-heeeeecceeeee
Confidence 356889999999999998876 5577778889999999888887653 123456555443 3445677777888
Q ss_pred HHHHHhhchhhhcc---ceEEEEeCCCeEEEeeccccccCcEEEeecCcccCceEEEeeecCCCCcEEEEecccCCCCcc
Q 002671 123 EDWRRFMQDKEVNA---RKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNL 199 (894)
Q Consensus 123 ~d~~r~k~~~~~n~---~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~~ 199 (894)
++++.-..-.++.. .++.|+ |||+|.+++.+.|+|||||.++.|++||||++||+.+ .+.||+|.|||||-|
T Consensus 117 eE~nAGn~aa~L~a~LA~KakVl-RDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~gD----~LkiDQSAlTGESLp 191 (942)
T KOG0205|consen 117 EENNAGNAAAALMAGLAPKAKVL-RDGKWSEQEASILVPGDILSIKLGDIIPADARLLEGD----PLKIDQSALTGESLP 191 (942)
T ss_pred eccccchHHHHHHhccCcccEEe-ecCeeeeeeccccccCceeeeccCCEecCccceecCC----ccccchhhhcCCccc
Confidence 88887776555543 689999 8999999999999999999999999999999999955 389999999999999
Q ss_pred eeecccccCCCCCchhhhccceeEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEecccch
Q 002671 200 KVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSK 279 (894)
Q Consensus 200 ~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~g~Vv~tG~~Tk 279 (894)
+.|++++.+ |+|+.+..|+ +.++|++||..|.
T Consensus 192 vtKh~gd~v---------------------------fSgSTcKqGE---------------------~eaVViATg~~TF 223 (942)
T KOG0205|consen 192 VTKHPGDEV---------------------------FSGSTCKQGE---------------------IEAVVIATGVHTF 223 (942)
T ss_pred cccCCCCce---------------------------ecccccccce---------------------EEEEEEEecccee
Confidence 999999988 9999999999 9999999999998
Q ss_pred hhhccC--CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCCCchhHHHHHH
Q 002671 280 VMQNAT--TSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLV 357 (894)
Q Consensus 280 ~~~~~~--~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~ 357 (894)
.++-.. .+.....++++.++-+..++++.++ +.+++-+...++... .-|. ..+-
T Consensus 224 ~GkAA~LVdst~~~GHFqkVLt~IGn~ci~si~-~g~lie~~vmy~~q~----R~~r-------------------~~i~ 279 (942)
T KOG0205|consen 224 FGKAAHLVDSTNQVGHFQKVLTGIGNFCICSIA-LGMLIEITVMYPIQH----RLYR-------------------DGID 279 (942)
T ss_pred ehhhHHhhcCCCCcccHHHHHHhhhhHHHHHHH-HHHHHHHHhhhhhhh----hhhh-------------------hhhh
Confidence 766443 3355678999999988776654332 222222221111110 0110 1122
Q ss_pred HHHHHhhccccchhhHHHHHHHHHHHHHHhccccccccCCCCCeEEeccccccccccceEEEecCCCceeecceEEEE--
Q 002671 358 TALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLK-- 435 (894)
Q Consensus 358 ~~i~ll~~~iP~sL~v~l~i~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~e~Lg~v~~I~~DKTGTLT~n~m~~~~-- 435 (894)
+.+++++.-||++||..+++...+++-++ ++++++++...++|+|+.+|++|+|||||||.|++.+.+
T Consensus 280 nLlvllIGgiPiamPtVlsvTMAiGs~rL----------aqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl 349 (942)
T KOG0205|consen 280 NLLVLLIGGIPIAMPTVLSVTMAIGSHRL----------SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNL 349 (942)
T ss_pred heheeeecccccccceeeeehhhHHHHHH----------HhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCc
Confidence 33445555699999998888889999998 899999999999999999999999999999999999876
Q ss_pred --EEEcCcccCCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCCccchhhhcccCCCCccccccCCCccccccccccC
Q 002671 436 --CSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGN 513 (894)
Q Consensus 436 --~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 513 (894)
+.+.|.. .
T Consensus 350 ~ev~v~gv~----~------------------------------------------------------------------ 359 (942)
T KOG0205|consen 350 IEVFVKGVD----K------------------------------------------------------------------ 359 (942)
T ss_pred ceeeecCCC----h------------------------------------------------------------------
Confidence 2222221 0
Q ss_pred CCCCCChhHHHHHHHHHhhcceeeecccCCCCCeeeecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCcee
Q 002671 514 WLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVER 593 (894)
Q Consensus 514 ~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~i~i~~~~~~~g~~~~~ 593 (894)
+. ..++-|+| . .. +..+..+.|++...+.- +..+.
T Consensus 360 -------D~-~~L~A~rA--s--r~-----------en~DAID~A~v~~L~dP----------------------Keara 394 (942)
T KOG0205|consen 360 -------DD-VLLTAARA--S--RK-----------ENQDAIDAAIVGMLADP----------------------KEARA 394 (942)
T ss_pred -------HH-HHHHHHHH--h--hh-----------cChhhHHHHHHHhhcCH----------------------HHHhh
Confidence 00 01222222 1 11 13588899999876531 11256
Q ss_pred EEEEEEeecCCCCCceEEEEEEcCCCcEEEEEccchhhhhHhhccCccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHH
Q 002671 594 EFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESE 673 (894)
Q Consensus 594 ~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e 673 (894)
.|+.++.+|||+..||....+.+++|+-+..+||||+.|++.|.... +.++.....+++|++.|+|.|++|++...+..
T Consensus 395 ~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~-~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~ 473 (942)
T KOG0205|consen 395 GIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDH-DIPERVHSIIDKFAERGLRSLAVARQEVPEKT 473 (942)
T ss_pred CceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccC-cchHHHHHHHHHHHHhcchhhhhhhhcccccc
Confidence 79999999999999999999999999999999999999999998754 47888999999999999999999998876531
Q ss_pred HHHHHHHHHHHHhhhhhCHHHHHHHHHHhhhcccEEEEeeeecccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHH
Q 002671 674 YSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGF 753 (894)
Q Consensus 674 ~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~ 753 (894)
+ +.-....+|+|+.-+-||+|++..++|.+....|..|.|+|||...-+...++
T Consensus 474 ----~----------------------~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgr 527 (942)
T KOG0205|consen 474 ----K----------------------ESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGR 527 (942)
T ss_pred ----c----------------------cCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhh
Confidence 0 11125678999999999999999999999999999999999999999999999
Q ss_pred hccccccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcchHHHHHHHHHh
Q 002671 754 ACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLA 833 (894)
Q Consensus 754 ~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~ 833 (894)
.+|+-.+-.+.-..-+.+.+ . -+.|-... .+ .
T Consensus 528 rlgmgtnmypss~llG~~~~------------------------------~------~~~~~~v~---------el---i 559 (942)
T KOG0205|consen 528 RLGMGTNMYPSSALLGLGKD------------------------------G------SMPGSPVD---------EL---I 559 (942)
T ss_pred hhccccCcCCchhhccCCCC------------------------------C------CCCCCcHH---------HH---h
Confidence 99875431110000000000 0 00010000 01 1
Q ss_pred hccCeEEEEeCCchhHHHHHHHHhhcCCCEEEEEcCChhcHHHHHhCCccEEecCc
Q 002671 834 VECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGV 889 (894)
Q Consensus 834 ~~~~~vv~~r~~P~qK~~iv~~lk~~~~~~v~~iGDG~ND~~ml~~AdvGI~i~g~ 889 (894)
. ++-=|+.+.|+||..+|+.+|+ .++.+.|+|||+||+|+|+.||+||++.+.
T Consensus 560 e--~adgfAgVfpehKy~iV~~Lq~-r~hi~gmtgdgvndapaLKkAdigiava~a 612 (942)
T KOG0205|consen 560 E--KADGFAGVFPEHKYEIVKILQE-RKHIVGMTGDGVNDAPALKKADIGIAVADA 612 (942)
T ss_pred h--hccCccccCHHHHHHHHHHHhh-cCceecccCCCcccchhhcccccceeeccc
Confidence 1 1226899999999999999998 899999999999999999999999998653
No 27
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=5.4e-58 Score=550.75 Aligned_cols=433 Identities=21% Similarity=0.226 Sum_probs=349.3
Q ss_pred HHHHHHHHHHHHHHHHHhhchhhhc------cceEEEEeCCCeEEEeeccccccCcEEEeecCcccCceEEEeeecCCCC
Q 002671 111 IVVGVSMAKEALEDWRRFMQDKEVN------ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDG 184 (894)
Q Consensus 111 ~v~~~~~~~~~~~d~~r~k~~~~~n------~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G 184 (894)
+++++..+.+++|.+.+.++.+.++ ..+++|+ |+|++++|++++|+|||+|.|++||.|||||+|++ |
T Consensus 211 ~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vi-r~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~-----g 284 (741)
T PRK11033 211 MVLLLFLIGERLEGYAASRARRGVSALMALVPETATRL-RDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLS-----P 284 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEE-----C
Confidence 4455666778888888877755443 4789999 89999999999999999999999999999999999 7
Q ss_pred cEEEEecccCCCCcceeecccccCCCCCchhhhccceeEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeecceEeecC
Q 002671 185 ICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNT 264 (894)
Q Consensus 185 ~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt 264 (894)
.+.||||.||||+.|+.|.+++.. |+||++.+|.
T Consensus 285 ~~~vdes~lTGEs~Pv~k~~Gd~V---------------------------~aGt~~~~G~------------------- 318 (741)
T PRK11033 285 FASFDESALTGESIPVERATGEKV---------------------------PAGATSVDRL------------------- 318 (741)
T ss_pred cEEeecccccCCCCCEecCCCCee---------------------------ccCCEEcCce-------------------
Confidence 799999999999999999988765 8999999998
Q ss_pred CeEEEEEEEecccchhh---hccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCcc
Q 002671 265 AHVYGSVIFTGHDSKVM---QNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDV 341 (894)
Q Consensus 265 ~~~~g~Vv~tG~~Tk~~---~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~yl~~~~~~~ 341 (894)
+.+.|+.+|.+|.+. +..+.++.+++++++.++++..++.+++++++++.+++|.++... .|
T Consensus 319 --~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~~----~~--------- 383 (741)
T PRK11033 319 --VTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLFAA----PW--------- 383 (741)
T ss_pred --EEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC----CH---------
Confidence 999999999999654 444577778899999999999999999999999988876432210 12
Q ss_pred ccCCCCCchhHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhccccccccCCCCCeEEeccccccccccceEEEec
Q 002671 342 YFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSD 421 (894)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~l~i~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~e~Lg~v~~I~~D 421 (894)
...+.+++.+++..|||+|.++.+++...+.... +++++++|+.+.+|.|+++++||||
T Consensus 384 -----------~~~i~~a~svlviacPcaL~latP~a~~~~l~~a----------ar~gilik~~~alE~l~~v~~v~fD 442 (741)
T PRK11033 384 -----------QEWIYRGLTLLLIGCPCALVISTPAAITSGLAAA----------ARRGALIKGGAALEQLGRVTTVAFD 442 (741)
T ss_pred -----------HHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHH----------HHCCeEEcCcHHHHHhhCCCEEEEe
Confidence 1356778999999999999998888888877777 7899999999999999999999999
Q ss_pred CCCceeecceEEEEEEEcCcccCCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCCccchhhhcccCCCCccccccCC
Q 002671 422 KTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKG 501 (894)
Q Consensus 422 KTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 501 (894)
||||||+|+|++..+...+.. ++
T Consensus 443 KTGTLT~g~~~v~~~~~~~~~-----~~---------------------------------------------------- 465 (741)
T PRK11033 443 KTGTLTEGKPQVTDIHPATGI-----SE---------------------------------------------------- 465 (741)
T ss_pred CCCCCcCCceEEEEEEecCCC-----CH----------------------------------------------------
Confidence 999999999999987532110 00
Q ss_pred CccccccccccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCCeeeecCChhHHHHHHHHHHCCcEEEEEcCCeEEEE
Q 002671 502 FNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIR 581 (894)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~i~i~ 581 (894)
.+++...+.. +..+.||.++|++++++..|..
T Consensus 466 ----------------------~~~l~~aa~~--------------e~~s~hPia~Ai~~~a~~~~~~------------ 497 (741)
T PRK11033 466 ----------------------SELLALAAAV--------------EQGSTHPLAQAIVREAQVRGLA------------ 497 (741)
T ss_pred ----------------------HHHHHHHHHH--------------hcCCCCHHHHHHHHHHHhcCCC------------
Confidence 0222222211 1125799999999999876532
Q ss_pred ecCCCCCCCceeEEEEEEeecCCCCCceEE-EEEEc-CCCcEEEEEccchhhhhHhhccCccccHHHHHHHHHHHHhcCC
Q 002671 582 ERYPPKGQPVEREFKILNLLDFTSKRKRMS-VIVRD-EDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGL 659 (894)
Q Consensus 582 ~~~~~~g~~~~~~~~il~~~~F~s~rkrms-viv~~-~~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Gl 659 (894)
+||.++++.+. .-++. -+|..+ .-|+++.+.+ ..+.....++++..+|.
T Consensus 498 -------------------~~~~~~~~~~~g~Gv~~~~~g~~~--~ig~~~~~~~--------~~~~~~~~~~~~~~~g~ 548 (741)
T PRK11033 498 -------------------IPEAESQRALAGSGIEGQVNGERV--LICAPGKLPP--------LADAFAGQINELESAGK 548 (741)
T ss_pred -------------------CCCCcceEEEeeEEEEEEECCEEE--EEecchhhhh--------ccHHHHHHHHHHHhCCC
Confidence 34555555542 11221 234332 3478777643 11234455678899999
Q ss_pred eEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhCHHHHHHHHHHhhhcccEEEEeeeecccccCChHHHHHHHHHcCCeEEE
Q 002671 660 RTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWV 739 (894)
Q Consensus 660 r~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~~ 739 (894)
|++++|+ |.+++|+++++|++|+|++++|++|+++|++++|
T Consensus 549 ~~v~va~---------------------------------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~l 589 (741)
T PRK11033 549 TVVLVLR---------------------------------------NDDVLGLIALQDTLRADARQAISELKALGIKGVM 589 (741)
T ss_pred EEEEEEE---------------------------------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEE
Confidence 9999994 5689999999999999999999999999999999
Q ss_pred EcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhhhhhhccCCCCCceEEEEeCchhhh
Q 002671 740 LTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAY 819 (894)
Q Consensus 740 lTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~ 819 (894)
+|||+..+|..+|+++||.
T Consensus 590 lTGd~~~~a~~ia~~lgi~------------------------------------------------------------- 608 (741)
T PRK11033 590 LTGDNPRAAAAIAGELGID------------------------------------------------------------- 608 (741)
T ss_pred EcCCCHHHHHHHHHHcCCC-------------------------------------------------------------
Confidence 9999999999999999983
Q ss_pred hcchHHHHHHHHHhhccCeEEEEeCCchhHHHHHHHHhhcCCCEEEEEcCChhcHHHHHhCCccEEec
Q 002671 820 ALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS 887 (894)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~vv~~r~~P~qK~~iv~~lk~~~~~~v~~iGDG~ND~~ml~~AdvGI~i~ 887 (894)
.+++++|+||..+|+.+++ . +.|+|+|||.||+|||+.|||||+|+
T Consensus 609 --------------------~~~~~~p~~K~~~v~~l~~-~-~~v~mvGDgiNDapAl~~A~vgia~g 654 (741)
T PRK11033 609 --------------------FRAGLLPEDKVKAVTELNQ-H-APLAMVGDGINDAPAMKAASIGIAMG 654 (741)
T ss_pred --------------------eecCCCHHHHHHHHHHHhc-C-CCEEEEECCHHhHHHHHhCCeeEEec
Confidence 3456899999999999986 3 58999999999999999999999995
No 28
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.6e-58 Score=519.52 Aligned_cols=455 Identities=21% Similarity=0.253 Sum_probs=360.7
Q ss_pred HHHHHHHHHHHHHHHhhchhhh------ccceEEEEeCCCe-EEEeeccccccCcEEEeecCcccCceEEEeeecCCCCc
Q 002671 113 VGVSMAKEALEDWRRFMQDKEV------NARKVSVHVGNGV-FSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGI 185 (894)
Q Consensus 113 ~~~~~~~~~~~d~~r~k~~~~~------n~~~~~V~~r~g~-~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~ 185 (894)
+.+..+.+++|..-++|+...+ .+.++.++ .+|+ .++|+.+.|++||+|+|.+|+.||+||++++ |.
T Consensus 348 i~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii-~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~-----Gs 421 (951)
T KOG0207|consen 348 ITFITLGRWLESLAKGKTSEALSKLMSLAPSKATII-EDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVD-----GS 421 (951)
T ss_pred HHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEe-ecCCcceEeeeeeeccCCEEEECCCCccccccEEEe-----Cc
Confidence 3355677888888888875444 45788888 7886 8999999999999999999999999999999 88
Q ss_pred EEEEecccCCCCcceeecccccCCCCCchhhhccceeEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeecceEeecCC
Q 002671 186 CYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTA 265 (894)
Q Consensus 186 ~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~ 265 (894)
++||||.+|||+.|+.|++++.+ .+|+++.+|.
T Consensus 422 s~VDEs~iTGEs~PV~Kk~gs~V---------------------------iaGsiN~nG~-------------------- 454 (951)
T KOG0207|consen 422 SEVDESLITGESMPVPKKKGSTV---------------------------IAGSINLNGT-------------------- 454 (951)
T ss_pred eeechhhccCCceecccCCCCee---------------------------eeeeecCCce--------------------
Confidence 99999999999999999998776 7999999888
Q ss_pred eEEEEEEEecccchh---hhccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccc
Q 002671 266 HVYGSVIFTGHDSKV---MQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVY 342 (894)
Q Consensus 266 ~~~g~Vv~tG~~Tk~---~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~ 342 (894)
.+.-++.+|.||.+ .+..+.++..++|+|+.+|+++.++.++++++++.++++|.+..... .||-
T Consensus 455 -l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~---~~~~-------- 522 (951)
T KOG0207|consen 455 -LLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIV---FKYP-------- 522 (951)
T ss_pred -EEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHcccc---ccCc--------
Confidence 99999999999955 55666888899999999999999999999999999999988876533 2321
Q ss_pred cCCCCCchhHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhccccccccCCCCCeEEeccccccccccceEEEecC
Q 002671 343 FNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDK 422 (894)
Q Consensus 343 ~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~l~i~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~e~Lg~v~~I~~DK 422 (894)
..........|..++.+++.+|||+|.++.+++.+.+...- +.+|+++|....+|.+.+|++|.|||
T Consensus 523 ---~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvg----------A~nGvLIKGge~LE~~hkv~tVvFDK 589 (951)
T KOG0207|consen 523 ---RSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVG----------ATNGVLIKGGEALEKAHKVKTVVFDK 589 (951)
T ss_pred ---chhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechh----------hhcceEEcCcHHHHHHhcCCEEEEcC
Confidence 11112334588899999999999999999988877776665 88999999999999999999999999
Q ss_pred CCceeecceEEEEEEEcCcccCCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCCccchhhhcccCCCCccccccCCC
Q 002671 423 TGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGF 502 (894)
Q Consensus 423 TGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 502 (894)
|||||+|++.+.++.+-+..
T Consensus 590 TGTLT~G~~~V~~~~~~~~~------------------------------------------------------------ 609 (951)
T KOG0207|consen 590 TGTLTEGKPTVVDFKSLSNP------------------------------------------------------------ 609 (951)
T ss_pred CCceecceEEEEEEEecCCc------------------------------------------------------------
Confidence 99999999999988643221
Q ss_pred ccccccccccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCCeeeecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEe
Q 002671 503 NFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRE 582 (894)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~i~i~~ 582 (894)
-..++++...+. .+-.++||...|++++|+..+.. ++...
T Consensus 610 ------------------~~~~e~l~~v~a--------------~Es~SeHPig~AIv~yak~~~~~-----~~~~~--- 649 (951)
T KOG0207|consen 610 ------------------ISLKEALALVAA--------------MESGSEHPIGKAIVDYAKEKLVE-----PNPEG--- 649 (951)
T ss_pred ------------------ccHHHHHHHHHH--------------HhcCCcCchHHHHHHHHHhcccc-----cCccc---
Confidence 011223332221 11235799999999999987611 11111
Q ss_pred cCCCCCCCceeEEEEEEeecCCCCCceEEEEEEcCCCcEEEEEccchhhhhHhhccCccccHHHHHHHHHHHHhcCCeEE
Q 002671 583 RYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTL 662 (894)
Q Consensus 583 ~~~~~g~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l 662 (894)
++..-.|.-..+...+.+. ++. .+-|.-+.| ...+....+.+...+++....|..+.
T Consensus 650 --------------~~~~~~~pg~g~~~~~~~~---~~~--i~iGN~~~~----~r~~~~~~~~i~~~~~~~e~~g~tvv 706 (951)
T KOG0207|consen 650 --------------VLSFEYFPGEGIYVTVTVD---GNE--VLIGNKEWM----SRNGCSIPDDILDALTESERKGQTVV 706 (951)
T ss_pred --------------cceeecccCCCcccceEEe---eeE--EeechHHHH----HhcCCCCchhHHHhhhhHhhcCceEE
Confidence 1111122222222111211 111 333554333 22233345567778888889999999
Q ss_pred EEEEEeCCHHHHHHHHHHHHHHHhhhhhCHHHHHHHHHHhhhcccEEEEeeeecccccCChHHHHHHHHHcCCeEEEEcC
Q 002671 663 ALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTG 742 (894)
Q Consensus 663 ~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~~lTG 742 (894)
++|. |-++.|+++++|++|+|+..+|+.||+.||++.|+||
T Consensus 707 ~v~v---------------------------------------n~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTG 747 (951)
T KOG0207|consen 707 YVAV---------------------------------------NGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTG 747 (951)
T ss_pred EEEE---------------------------------------CCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcC
Confidence 9994 6689999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcc
Q 002671 743 DKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALE 822 (894)
Q Consensus 743 D~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~ 822 (894)
|+..+|.++|+++|+-.
T Consensus 748 Dn~~aA~svA~~VGi~~--------------------------------------------------------------- 764 (951)
T KOG0207|consen 748 DNDAAARSVAQQVGIDN--------------------------------------------------------------- 764 (951)
T ss_pred CCHHHHHHHHHhhCcce---------------------------------------------------------------
Confidence 99999999999999521
Q ss_pred hHHHHHHHHHhhccCeEEEEeCCchhHHHHHHHHhhcCCCEEEEEcCChhcHHHHHhCCccEEecC
Q 002671 823 DDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISG 888 (894)
Q Consensus 823 ~~~~~~~~~~~~~~~~vv~~r~~P~qK~~iv~~lk~~~~~~v~~iGDG~ND~~ml~~AdvGI~i~g 888 (894)
|+|.+.|+||+++|+.+|+ .++.|+|+|||.||+|+|.+|||||+|+.
T Consensus 765 -----------------V~aev~P~~K~~~Ik~lq~-~~~~VaMVGDGINDaPALA~AdVGIaig~ 812 (951)
T KOG0207|consen 765 -----------------VYAEVLPEQKAEKIKEIQK-NGGPVAMVGDGINDAPALAQADVGIAIGA 812 (951)
T ss_pred -----------------EEeccCchhhHHHHHHHHh-cCCcEEEEeCCCCccHHHHhhccceeecc
Confidence 9999999999999999998 78999999999999999999999999953
No 29
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=2.1e-56 Score=525.26 Aligned_cols=438 Identities=24% Similarity=0.292 Sum_probs=339.7
Q ss_pred HHHHHHHHHHHHHHHhhchhhhc------cceEEEEeCCC-eEEEeeccccccCcEEEeecCcccCceEEEeeecCCCCc
Q 002671 113 VGVSMAKEALEDWRRFMQDKEVN------ARKVSVHVGNG-VFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGI 185 (894)
Q Consensus 113 ~~~~~~~~~~~d~~r~k~~~~~n------~~~~~V~~r~g-~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~ 185 (894)
+++..+..+++.+.++++.+.++ ..+++|+ |+| +++++++++|+|||+|.|++||.|||||+|++ |.
T Consensus 25 ~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~-r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi~-----g~ 98 (556)
T TIGR01525 25 LFLFLLGETLEERAKGRASDALSALLALAPSTARVL-QGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVIS-----GE 98 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEE-ECCCeEEEEEHHHCCCCCEEEECCCCEeccceEEEe-----cc
Confidence 33444455566665555544433 3679999 674 99999999999999999999999999999999 77
Q ss_pred EEEEecccCCCCcceeecccccCCCCCchhhhccceeEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeecceEeecCC
Q 002671 186 CYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTA 265 (894)
Q Consensus 186 ~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~ 265 (894)
+.||||.||||+.|+.|.+++.. |+||.+.+|.
T Consensus 99 ~~vdes~lTGEs~pv~k~~g~~v---------------------------~aGt~v~~g~-------------------- 131 (556)
T TIGR01525 99 SEVDESALTGESMPVEKKEGDEV---------------------------FAGTINGDGS-------------------- 131 (556)
T ss_pred eEEeehhccCCCCCEecCCcCEE---------------------------eeceEECCce--------------------
Confidence 99999999999999999887544 9999999888
Q ss_pred eEEEEEEEecccchhhhcc---CCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccc
Q 002671 266 HVYGSVIFTGHDSKVMQNA---TTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVY 342 (894)
Q Consensus 266 ~~~g~Vv~tG~~Tk~~~~~---~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~ 342 (894)
++++|+.||.+|.+.+.. .....+++++++.+++++.++.++.++++++.++++.+...
T Consensus 132 -~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~----------------- 193 (556)
T TIGR01525 132 -LTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGA----------------- 193 (556)
T ss_pred -EEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----------------
Confidence 999999999999776543 34566789999999999999999998888888876543211
Q ss_pred cCCCCCchhHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhccccccccCCCCCeEEeccccccccccceEEEecC
Q 002671 343 FNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDK 422 (894)
Q Consensus 343 ~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~l~i~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~e~Lg~v~~I~~DK 422 (894)
...+.+++.+++..|||+|+++++++...+..++ .++++++|+++.+|.||+++++||||
T Consensus 194 ----------~~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~----------~~~gilvk~~~~le~l~~v~~i~fDK 253 (556)
T TIGR01525 194 ----------LGALYRALAVLVVACPCALGLATPVAILVAIGVA----------ARRGILIKGGDALEKLAKVKTVVFDK 253 (556)
T ss_pred ----------chHHHHHHHHHhhccccchhehhHHHHHHHHHHH----------HHCCceecCchHHHHhhcCCEEEEeC
Confidence 0467788999999999999999999999999988 88999999999999999999999999
Q ss_pred CCceeecceEEEEEEEcCcccCCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCCccchhhhcccCCCCccccccCCC
Q 002671 423 TGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGF 502 (894)
Q Consensus 423 TGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 502 (894)
|||||+|+|++.++...+... .
T Consensus 254 TGTLT~~~~~v~~~~~~~~~~-~--------------------------------------------------------- 275 (556)
T TIGR01525 254 TGTLTTGKPTVVDVEPLDDAS-I--------------------------------------------------------- 275 (556)
T ss_pred CCCCcCCceEEEEEEecCCCC-c---------------------------------------------------------
Confidence 999999999999886432210 0
Q ss_pred ccccccccccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCCeeeecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEe
Q 002671 503 NFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRE 582 (894)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~i~i~~ 582 (894)
...+++...+.+. ..+.||.+.|+++++++.|..... +
T Consensus 276 -------------------~~~~~l~~a~~~e--------------~~~~hp~~~Ai~~~~~~~~~~~~~--~------- 313 (556)
T TIGR01525 276 -------------------SEEELLALAAALE--------------QSSSHPLARAIVRYAKKRGLELPK--Q------- 313 (556)
T ss_pred -------------------cHHHHHHHHHHHh--------------ccCCChHHHHHHHHHHhcCCCccc--c-------
Confidence 0012222222111 124699999999999987654211 0
Q ss_pred cCCCCCCCceeEEEEEEeecCCCCCceEEEEEEcCCCcEEEEEccchhhhhHhhccCccccHHHHHHHHHHHHhcCCeEE
Q 002671 583 RYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTL 662 (894)
Q Consensus 583 ~~~~~g~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l 662 (894)
++ ...+ ..+.++..+ +|. ..+..|+++.+ ..+..........+..++.+|+|++
T Consensus 314 ------------~~-~~~~----~~~gi~~~~---~g~-~~~~lg~~~~~-----~~~~~~~~~~~~~~~~~~~~g~~~~ 367 (556)
T TIGR01525 314 ------------ED-VEEV----PGKGVEATV---DGQ-EEVRIGNPRLL-----ELAAEPISASPDLLNEGESQGKTVV 367 (556)
T ss_pred ------------cC-eeEe----cCCeEEEEE---CCe-eEEEEecHHHH-----hhcCCCchhhHHHHHHHhhCCcEEE
Confidence 00 0000 011122211 110 12333555433 1111111223456677889999999
Q ss_pred EEEEEeCCHHHHHHHHHHHHHHHhhhhhCHHHHHHHHHHhhhcccEEEEeeeecccccCChHHHHHHHHHcC-CeEEEEc
Q 002671 663 ALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAG-LKIWVLT 741 (894)
Q Consensus 663 ~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aG-Ikv~~lT 741 (894)
.+| .|.+++|.+.++|++++|++++|+.|+++| ++++|+|
T Consensus 368 ~v~---------------------------------------~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivT 408 (556)
T TIGR01525 368 FVA---------------------------------------VDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLT 408 (556)
T ss_pred EEE---------------------------------------ECCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEe
Confidence 999 356899999999999999999999999999 9999999
Q ss_pred CCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhc
Q 002671 742 GDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYAL 821 (894)
Q Consensus 742 GD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~ 821 (894)
||+..+|..+++++|+..
T Consensus 409 gd~~~~a~~i~~~lgi~~-------------------------------------------------------------- 426 (556)
T TIGR01525 409 GDNRSAAEAVAAELGIDE-------------------------------------------------------------- 426 (556)
T ss_pred CCCHHHHHHHHHHhCCCe--------------------------------------------------------------
Confidence 999999999999999831
Q ss_pred chHHHHHHHHHhhccCeEEEEeCCchhHHHHHHHHhhcCCCEEEEEcCChhcHHHHHhCCccEEec
Q 002671 822 EDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS 887 (894)
Q Consensus 822 ~~~~~~~~~~~~~~~~~vv~~r~~P~qK~~iv~~lk~~~~~~v~~iGDG~ND~~ml~~AdvGI~i~ 887 (894)
+|+++.|++|..+++.++. .++.|+|+|||.||++|++.|||||+++
T Consensus 427 ------------------~f~~~~p~~K~~~v~~l~~-~~~~v~~vGDg~nD~~al~~A~vgia~g 473 (556)
T TIGR01525 427 ------------------VHAELLPEDKLAIVKELQE-EGGVVAMVGDGINDAPALAAADVGIAMG 473 (556)
T ss_pred ------------------eeccCCHHHHHHHHHHHHH-cCCEEEEEECChhHHHHHhhCCEeEEeC
Confidence 7888999999999999997 6789999999999999999999999996
No 30
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=6.5e-56 Score=519.19 Aligned_cols=426 Identities=22% Similarity=0.284 Sum_probs=337.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhchhhh------ccceEEEEeCCCeEEEeeccccccCcEEEeecCcccCceEEEeeecCCC
Q 002671 110 AIVVGVSMAKEALEDWRRFMQDKEV------NARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYED 183 (894)
Q Consensus 110 ~~v~~~~~~~~~~~d~~r~k~~~~~------n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~ 183 (894)
.+++++..+.+++|++.++++.+.+ ...+++|++++|.+++|+.++|+|||+|.|++||.|||||+|++
T Consensus 58 ~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~----- 132 (562)
T TIGR01511 58 AMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE----- 132 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE-----
Confidence 3444555566777877666654433 34688888556888999999999999999999999999999999
Q ss_pred CcEEEEecccCCCCcceeecccccCCCCCchhhhccceeEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeecceEeec
Q 002671 184 GICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRN 263 (894)
Q Consensus 184 G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~n 263 (894)
|.+.||||.||||+.|+.|++++.. |+||++.+|.
T Consensus 133 g~~~vdes~lTGEs~pv~k~~gd~V---------------------------~aGt~~~~g~------------------ 167 (562)
T TIGR01511 133 GESEVDESLVTGESLPVPKKVGDPV---------------------------IAGTVNGTGS------------------ 167 (562)
T ss_pred CceEEehHhhcCCCCcEEcCCCCEE---------------------------EeeeEECCce------------------
Confidence 7799999999999999999988755 9999999998
Q ss_pred CCeEEEEEEEecccchhhh---ccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCc
Q 002671 264 TAHVYGSVIFTGHDSKVMQ---NATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETD 340 (894)
Q Consensus 264 t~~~~g~Vv~tG~~Tk~~~---~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~yl~~~~~~ 340 (894)
+.+.|+.+|.+|.+.+ ....++.+++++++.+++++.++++++++++++.+++|.
T Consensus 168 ---~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~------------------- 225 (562)
T TIGR01511 168 ---LVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL------------------- 225 (562)
T ss_pred ---EEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------
Confidence 9999999999997654 344667778999999999999999998888887766532
Q ss_pred cccCCCCCchhHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhccccccccCCCCCeEEeccccccccccceEEEe
Q 002671 341 VYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILS 420 (894)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~l~i~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~e~Lg~v~~I~~ 420 (894)
..+.+++.+++..|||+|+++++++...+..++ +++++++|+.+.+|.|+++++|||
T Consensus 226 -------------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~a----------a~~gIlik~~~~lE~l~~v~~i~f 282 (562)
T TIGR01511 226 -------------FALEFAVTVLIIACPCALGLATPTVIAVATGLA----------AKNGVLIKDGDALERAANIDTVVF 282 (562)
T ss_pred -------------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHH----------HHCCeEEcChHHHHHhhCCCEEEE
Confidence 256778999999999999999999999999888 899999999999999999999999
Q ss_pred cCCCceeecceEEEEEEEcCcccCCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCCccchhhhcccCCCCccccccC
Q 002671 421 DKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIK 500 (894)
Q Consensus 421 DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 500 (894)
|||||||+|+|++..+...+.. ++
T Consensus 283 DKTGTLT~g~~~v~~i~~~~~~-----~~--------------------------------------------------- 306 (562)
T TIGR01511 283 DKTGTLTQGKPTVTDVHVFGDR-----DR--------------------------------------------------- 306 (562)
T ss_pred CCCCCCcCCCEEEEEEecCCCC-----CH---------------------------------------------------
Confidence 9999999999999987532110 00
Q ss_pred CCccccccccccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCCeeeecCChhHHHHHHHHHHCCcEEEEEcCCeEEE
Q 002671 501 GFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFI 580 (894)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~i~i 580 (894)
.+++..++.+ +..+.||.+.|+++++++.|.....-
T Consensus 307 -----------------------~~~l~~aa~~--------------e~~s~HPia~Ai~~~~~~~~~~~~~~------- 342 (562)
T TIGR01511 307 -----------------------TELLALAAAL--------------EAGSEHPLAKAIVSYAKEKGITLVEV------- 342 (562)
T ss_pred -----------------------HHHHHHHHHH--------------hccCCChHHHHHHHHHHhcCCCcCCC-------
Confidence 1222222211 11246999999999998776532110
Q ss_pred EecCCCCCCCceeEEEEEEeecCCCCCceEEEEEEcCCCcEEEEEccchhhhhHhhccCccccHHHHHHHHHHHHhcCCe
Q 002671 581 RERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLR 660 (894)
Q Consensus 581 ~~~~~~~g~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr 660 (894)
..++ .+ ..+.+...+ +| .-+..|+++.+.+. +... .++..+|.+
T Consensus 343 ------------~~~~---~~----~g~Gi~~~~---~g--~~~~iG~~~~~~~~----~~~~--------~~~~~~g~~ 386 (562)
T TIGR01511 343 ------------SDFK---AI----PGIGVEGTV---EG--TKIQLGNEKLLGEN----AIKI--------DGKAEQGST 386 (562)
T ss_pred ------------CCeE---EE----CCceEEEEE---CC--EEEEEECHHHHHhC----CCCC--------ChhhhCCCE
Confidence 0010 00 112222222 22 23455777655321 1111 124568989
Q ss_pred EEEEEEEeCCHHHHHHHHHHHHHHHhhhhhCHHHHHHHHHHhhhcccEEEEeeeecccccCChHHHHHHHHHcCCeEEEE
Q 002671 661 TLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVL 740 (894)
Q Consensus 661 ~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~~l 740 (894)
++.++ .|.+++|+++++|++|++++++|+.|++.|++++|+
T Consensus 387 ~~~~~---------------------------------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~il 427 (562)
T TIGR01511 387 SVLVA---------------------------------------VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVML 427 (562)
T ss_pred EEEEE---------------------------------------ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEE
Confidence 88887 477899999999999999999999999999999999
Q ss_pred cCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhh
Q 002671 741 TGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYA 820 (894)
Q Consensus 741 TGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~ 820 (894)
|||+..+|..+++++||.
T Consensus 428 Sgd~~~~a~~ia~~lgi~-------------------------------------------------------------- 445 (562)
T TIGR01511 428 TGDNRKTAKAVAKELGIN-------------------------------------------------------------- 445 (562)
T ss_pred cCCCHHHHHHHHHHcCCc--------------------------------------------------------------
Confidence 999999999999999982
Q ss_pred cchHHHHHHHHHhhccCeEEEEeCCchhHHHHHHHHhhcCCCEEEEEcCChhcHHHHHhCCccEEec
Q 002671 821 LEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS 887 (894)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~vv~~r~~P~qK~~iv~~lk~~~~~~v~~iGDG~ND~~ml~~AdvGI~i~ 887 (894)
+++++.|++|..+++.+++ .++.|+|+|||.||++|++.|||||+++
T Consensus 446 -------------------~~~~~~p~~K~~~v~~l~~-~~~~v~~VGDg~nD~~al~~A~vgia~g 492 (562)
T TIGR01511 446 -------------------VRAEVLPDDKAALIKELQE-KGRVVAMVGDGINDAPALAQADVGIAIG 492 (562)
T ss_pred -------------------EEccCChHHHHHHHHHHHH-cCCEEEEEeCCCccHHHHhhCCEEEEeC
Confidence 5667899999999999997 7889999999999999999999999996
No 31
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=1.1e-54 Score=507.20 Aligned_cols=437 Identities=21% Similarity=0.260 Sum_probs=336.6
Q ss_pred HHHHHHHhcccCCCCCCchhhhhHHHHHHHHHHHHHHHHHHHhhchhhh------ccceEEEEeCCCeEEEeeccccccC
Q 002671 86 FLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDKEV------NARKVSVHVGNGVFSYKPWEKIQVG 159 (894)
Q Consensus 86 ~l~~~il~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~d~~r~k~~~~~------n~~~~~V~~r~g~~~~i~~~~L~vG 159 (894)
++++++++++. ..|+.... +++++++. .+++.+.++++.+.+ +..+++|+ |+|+++++++++|+||
T Consensus 5 ~~~a~~~~~~~---~~~~~~~~-i~~~~~~~---~~l~~~~~~~a~~~l~~l~~~~~~~~~v~-r~g~~~~i~~~~l~~G 76 (536)
T TIGR01512 5 MALAALGAVAI---GEYLEGAL-LLLLFSIG---ETLEEYASGRARRALKALMELAPDTARVL-RGGSLEEVAVEELKVG 76 (536)
T ss_pred HHHHHHHHHHH---hhHHHHHH-HHHHHHHH---HHHHHHHHHHHHHHHHHHHhcCCCEEEEE-ECCEEEEEEHHHCCCC
Confidence 33444444442 24444433 32333333 445555554443333 45889999 8999999999999999
Q ss_pred cEEEeecCcccCceEEEeeecCCCCcEEEEecccCCCCcceeecccccCCCCCchhhhccceeEEEeeCCCCCceeEEEE
Q 002671 160 DIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGN 239 (894)
Q Consensus 160 DII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt 239 (894)
|+|.|++||.|||||+|++ |.+.||||+||||+.|+.|.+++.. |+||
T Consensus 77 Div~v~~G~~iP~Dg~ii~-----g~~~vdes~lTGEs~pv~k~~g~~v---------------------------~aGt 124 (536)
T TIGR01512 77 DVVVVKPGERVPVDGVVLS-----GTSTVDESALTGESVPVEKAPGDEV---------------------------FAGA 124 (536)
T ss_pred CEEEEcCCCEeecceEEEe-----CcEEEEecccCCCCCcEEeCCCCEE---------------------------Eeee
Confidence 9999999999999999999 7799999999999999999887544 9999
Q ss_pred EEECCeeeecCCCCeeecceEeecCCeEEEEEEEecccchhhhcc---CCCCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 002671 240 IEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNA---TTSPSKRSGIEKKMDKIIFILFAILVLISLIS 316 (894)
Q Consensus 240 ~~~~g~~~~l~~~nil~rgs~l~nt~~~~g~Vv~tG~~Tk~~~~~---~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~ 316 (894)
.+.+|. +++.|+.||.+|.+++.. .....+++++++.+++++.++.++.++++++.
T Consensus 125 ~v~~G~---------------------~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (536)
T TIGR01512 125 INLDGV---------------------LTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAI 183 (536)
T ss_pred EECCce---------------------EEEEEEEeccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998 999999999999776544 34566789999999999999999988888877
Q ss_pred HHHHhhhccccCCCccccCCCCCccccCCCCCchhHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhccccccccC
Q 002671 317 SIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDE 396 (894)
Q Consensus 317 ~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~l~i~~~~~~~~i~~d~~m~~~~ 396 (894)
++++.+... | ...+.+++.+++.+|||+|+++++++...+..++
T Consensus 184 ~~~~~~~~~------~--------------------~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~---------- 227 (536)
T TIGR01512 184 WLVPGLLKR------W--------------------PFWVYRALVLLVVASPCALVISAPAAYLSAISAA---------- 227 (536)
T ss_pred HHHHHHhcc------c--------------------HHHHHHHHHHHhhcCccccccchHHHHHHHHHHH----------
Confidence 665443210 1 1267788999999999999999999999999988
Q ss_pred CCCCeEEeccccccccccceEEEecCCCceeecceEEEEEEEcCcccCCCchHHHHHHHHhhhhchhhhhhhhhhcccCC
Q 002671 397 SGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKN 476 (894)
Q Consensus 397 ~~~~~~vr~~~~~e~Lg~v~~I~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (894)
+++++++|+++.+|.||+++++|||||||||+|+|++.++...
T Consensus 228 ~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~------------------------------------- 270 (536)
T TIGR01512 228 ARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA------------------------------------- 270 (536)
T ss_pred HHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH-------------------------------------
Confidence 8999999999999999999999999999999999999876310
Q ss_pred CCCccchhhhcccCCCCccccccCCCccccccccccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCCeeeecCChhH
Q 002671 477 SGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDE 556 (894)
Q Consensus 477 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e 556 (894)
+++...+.+. ..+.||.+
T Consensus 271 ------------------------------------------------~~l~~a~~~e--------------~~~~hp~~ 288 (536)
T TIGR01512 271 ------------------------------------------------EVLRLAAAAE--------------QASSHPLA 288 (536)
T ss_pred ------------------------------------------------HHHHHHHHHh--------------ccCCCcHH
Confidence 1122222111 12469999
Q ss_pred HHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEEEeecCCCCCceEEEEEEcCCCcEEEEEccchhhhhHhh
Q 002671 557 AAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRL 636 (894)
Q Consensus 557 ~Alv~~a~~~g~~~~~~~~~~i~i~~~~~~~g~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~ 636 (894)
.|+++++++.+ .+ + .. ..+| .+.+...+ +|.. +..|+++.+.+.
T Consensus 289 ~Ai~~~~~~~~-~~-----~-----------------~~---~~~~----g~gi~~~~---~g~~--~~ig~~~~~~~~- 332 (536)
T TIGR01512 289 RAIVDYARKRE-NV-----E-----------------SV---EEVP----GEGVRAVV---DGGE--VRIGNPRSLEAA- 332 (536)
T ss_pred HHHHHHHHhcC-CC-----c-----------------ce---EEec----CCeEEEEE---CCeE--EEEcCHHHHhhc-
Confidence 99999998654 10 0 00 0011 11222221 2332 234766443211
Q ss_pred ccCccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhCHHHHHHHHHHhhhcccEEEEeeeec
Q 002671 637 SKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVE 716 (894)
Q Consensus 637 ~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~ie 716 (894)
+ ...+..+|.+++.++ .|..++|.+.++
T Consensus 333 ---~----------~~~~~~~~~~~~~v~---------------------------------------~~~~~~g~i~~~ 360 (536)
T TIGR01512 333 ---V----------GARPESAGKTIVHVA---------------------------------------RDGTYLGYILLS 360 (536)
T ss_pred ---C----------CcchhhCCCeEEEEE---------------------------------------ECCEEEEEEEEe
Confidence 1 014566788877666 467899999999
Q ss_pred ccccCChHHHHHHHHHcCC-eEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhh
Q 002671 717 DKLQKGVPQCIDKLAQAGL-KIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNAS 795 (894)
Q Consensus 717 D~lr~~v~~~I~~L~~aGI-kv~~lTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (894)
|++|++++++|+.|+++|+ +++|+|||+..+|..+++++|+..
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~------------------------------------ 404 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE------------------------------------ 404 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh------------------------------------
Confidence 9999999999999999999 999999999999999999999832
Q ss_pred hhhhccCCCCCceEEEEeCchhhhhcchHHHHHHHHHhhccCeEEEEeCCchhHHHHHHHHhhcCCCEEEEEcCChhcHH
Q 002671 796 QMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVG 875 (894)
Q Consensus 796 ~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~~P~qK~~iv~~lk~~~~~~v~~iGDG~ND~~ 875 (894)
+|+++.|++|..+++.++. .++.|+|+|||.||++
T Consensus 405 --------------------------------------------~f~~~~p~~K~~~i~~l~~-~~~~v~~vGDg~nD~~ 439 (536)
T TIGR01512 405 --------------------------------------------VHAELLPEDKLEIVKELRE-KYGPVAMVGDGINDAP 439 (536)
T ss_pred --------------------------------------------hhhccCcHHHHHHHHHHHh-cCCEEEEEeCCHHHHH
Confidence 5677899999999999997 7889999999999999
Q ss_pred HHHhCCccEEec
Q 002671 876 MIQEADIGIGIS 887 (894)
Q Consensus 876 ml~~AdvGI~i~ 887 (894)
|++.||+||+++
T Consensus 440 al~~A~vgia~g 451 (536)
T TIGR01512 440 ALAAADVGIAMG 451 (536)
T ss_pred HHHhCCEEEEeC
Confidence 999999999996
No 32
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=7.5e-54 Score=525.55 Aligned_cols=439 Identities=21% Similarity=0.251 Sum_probs=349.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhchhhhc------cceEEEEeCCCeEEEeeccccccCcEEEeecCcccCceEEEeeecCCC
Q 002671 110 AIVVGVSMAKEALEDWRRFMQDKEVN------ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYED 183 (894)
Q Consensus 110 ~~v~~~~~~~~~~~d~~r~k~~~~~n------~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~ 183 (894)
.+++++..+.+++|.+-+.++.+.+. ..+++|+ |+|.+++|+.++|+|||+|.|++||.|||||+|++
T Consensus 290 ~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~-~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~----- 363 (834)
T PRK10671 290 AMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVV-TDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQ----- 363 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEE-eCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEE-----
Confidence 34455666778888888877665443 4778998 79999999999999999999999999999999999
Q ss_pred CcEEEEecccCCCCcceeecccccCCCCCchhhhccceeEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeecceEeec
Q 002671 184 GICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRN 263 (894)
Q Consensus 184 G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~n 263 (894)
|.+.||||.||||+.|+.|.+++.. |+||++.+|.
T Consensus 364 g~~~vdeS~lTGEs~pv~k~~gd~V---------------------------~aGt~~~~G~------------------ 398 (834)
T PRK10671 364 GEAWLDEAMLTGEPIPQQKGEGDSV---------------------------HAGTVVQDGS------------------ 398 (834)
T ss_pred ceEEEeehhhcCCCCCEecCCCCEE---------------------------Eecceeccee------------------
Confidence 7799999999999999999998765 9999999998
Q ss_pred CCeEEEEEEEecccchhhh---ccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCc
Q 002671 264 TAHVYGSVIFTGHDSKVMQ---NATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETD 340 (894)
Q Consensus 264 t~~~~g~Vv~tG~~Tk~~~---~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~yl~~~~~~ 340 (894)
+.+.|+.+|.+|.+.+ ..+.++..++++++.++++..++++++++++++.+++|.+... +
T Consensus 399 ---~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~~------~-------- 461 (834)
T PRK10671 399 ---VLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGP------A-------- 461 (834)
T ss_pred ---EEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------c--------
Confidence 9999999999996544 4455666789999999999999999999988888777644211 0
Q ss_pred cccCCCCCchhHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhccccccccCCCCCeEEeccccccccccceEEEe
Q 002671 341 VYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILS 420 (894)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~l~i~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~e~Lg~v~~I~~ 420 (894)
......+.+++.+++.+|||+|+++++++...+..++ +++++++|+.+.+|.|++++++||
T Consensus 462 ---------~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~----------a~~gilvk~~~~le~l~~v~~v~f 522 (834)
T PRK10671 462 ---------PQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRA----------AEFGVLVRDADALQRASTLDTLVF 522 (834)
T ss_pred ---------hHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHH----------HHCCeEEecHHHHHhhcCCCEEEE
Confidence 0113467789999999999999999999999999988 899999999999999999999999
Q ss_pred cCCCceeecceEEEEEEEcCcccCCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCCccchhhhcccCCCCccccccC
Q 002671 421 DKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIK 500 (894)
Q Consensus 421 DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 500 (894)
|||||||+|+|++..+...+. .++
T Consensus 523 DKTGTLT~g~~~v~~~~~~~~-----~~~--------------------------------------------------- 546 (834)
T PRK10671 523 DKTGTLTEGKPQVVAVKTFNG-----VDE--------------------------------------------------- 546 (834)
T ss_pred cCCCccccCceEEEEEEccCC-----CCH---------------------------------------------------
Confidence 999999999999988753210 000
Q ss_pred CCccccccccccCCCCCCChhHHHHHHH-HHhhcceeeecccCCCCCeeeecCChhHHHHHHHHHHCCcEEEEEcCCeEE
Q 002671 501 GFNFEDSRLMDGNWLKEPNVDTLLLFFR-ILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVF 579 (894)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lalc~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~i~ 579 (894)
.+++. +.+++. .+.||.+.|+++++...... .
T Consensus 547 -----------------------~~~l~~a~~~e~---------------~s~hp~a~Ai~~~~~~~~~~--~------- 579 (834)
T PRK10671 547 -----------------------AQALRLAAALEQ---------------GSSHPLARAILDKAGDMTLP--Q------- 579 (834)
T ss_pred -----------------------HHHHHHHHHHhC---------------CCCCHHHHHHHHHHhhCCCC--C-------
Confidence 01222 222221 14799999999988643210 0
Q ss_pred EEecCCCCCCCceeEEEEEEeecCCCCC-ceEEEEEEcCCCcEEEEEccchhhhhHhhccCccccHHHHHHHHHHHHhcC
Q 002671 580 IRERYPPKGQPVEREFKILNLLDFTSKR-KRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAG 658 (894)
Q Consensus 580 i~~~~~~~g~~~~~~~~il~~~~F~s~r-krmsviv~~~~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~G 658 (894)
... |.... +-+... .+|. .+..|+++.+.+. +. ..+.+...++++..+|
T Consensus 580 ------------~~~--------~~~~~g~Gv~~~---~~g~--~~~~G~~~~~~~~----~~-~~~~~~~~~~~~~~~g 629 (834)
T PRK10671 580 ------------VNG--------FRTLRGLGVSGE---AEGH--ALLLGNQALLNEQ----QV-DTKALEAEITAQASQG 629 (834)
T ss_pred ------------ccc--------ceEecceEEEEE---ECCE--EEEEeCHHHHHHc----CC-ChHHHHHHHHHHHhCC
Confidence 011 11111 111111 1343 3456888876431 11 1234556677888999
Q ss_pred CeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhCHHHHHHHHHHhhhcccEEEEeeeecccccCChHHHHHHHHHcCCeEE
Q 002671 659 LRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIW 738 (894)
Q Consensus 659 lr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~ 738 (894)
.+++.+|+ |..++|+++++|++|++++++|+.|++.|++++
T Consensus 630 ~~~v~va~---------------------------------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~ 670 (834)
T PRK10671 630 ATPVLLAV---------------------------------------DGKAAALLAIRDPLRSDSVAALQRLHKAGYRLV 670 (834)
T ss_pred CeEEEEEE---------------------------------------CCEEEEEEEccCcchhhHHHHHHHHHHCCCeEE
Confidence 99999994 446899999999999999999999999999999
Q ss_pred EEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhhhhhhccCCCCCceEEEEeCchhh
Q 002671 739 VLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLA 818 (894)
Q Consensus 739 ~lTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~ 818 (894)
|+|||+..+|..+++++||..
T Consensus 671 ~~Tgd~~~~a~~ia~~lgi~~----------------------------------------------------------- 691 (834)
T PRK10671 671 MLTGDNPTTANAIAKEAGIDE----------------------------------------------------------- 691 (834)
T ss_pred EEcCCCHHHHHHHHHHcCCCE-----------------------------------------------------------
Confidence 999999999999999999842
Q ss_pred hhcchHHHHHHHHHhhccCeEEEEeCCchhHHHHHHHHhhcCCCEEEEEcCChhcHHHHHhCCccEEecC
Q 002671 819 YALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISG 888 (894)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~vv~~r~~P~qK~~iv~~lk~~~~~~v~~iGDG~ND~~ml~~AdvGI~i~g 888 (894)
+++++.|++|..+++.++. .++.|+|+|||.||++|++.||+||+|+.
T Consensus 692 ---------------------~~~~~~p~~K~~~i~~l~~-~~~~v~~vGDg~nD~~al~~Agvgia~g~ 739 (834)
T PRK10671 692 ---------------------VIAGVLPDGKAEAIKRLQS-QGRQVAMVGDGINDAPALAQADVGIAMGG 739 (834)
T ss_pred ---------------------EEeCCCHHHHHHHHHHHhh-cCCEEEEEeCCHHHHHHHHhCCeeEEecC
Confidence 7788999999999999997 78899999999999999999999999963
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-51 Score=435.50 Aligned_cols=464 Identities=19% Similarity=0.265 Sum_probs=349.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhchhhhcc----ceEEEEeCCCeEEEeeccccccCcEEEeecCcccCceEEEeeecCC
Q 002671 107 LPLAIVVGVSMAKEALEDWRRFMQDKEVNA----RKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYE 182 (894)
Q Consensus 107 ~~l~~v~~~~~~~~~~~d~~r~k~~~~~n~----~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~ 182 (894)
+.|+|.+++..+-|++.+-|-+.+-..+.. ..+++++.+|.++.+++.+|+.||||.|+.||.||+||.+++
T Consensus 70 ~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIe---- 145 (681)
T COG2216 70 IILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIE---- 145 (681)
T ss_pred HHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEe----
Confidence 445556666666777776554444333322 345666456999999999999999999999999999999999
Q ss_pred CCcEEEEecccCCCCcceeecccccCCCCCchhhhccceeEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeecceEee
Q 002671 183 DGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLR 262 (894)
Q Consensus 183 ~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~ 262 (894)
|.++||||++||||.|+.|.++...... -- |+.+.
T Consensus 146 -G~asVdESAITGESaPViresGgD~ssV------------------------tG--------------------gT~v~ 180 (681)
T COG2216 146 -GVASVDESAITGESAPVIRESGGDFSSV------------------------TG--------------------GTRVL 180 (681)
T ss_pred -eeeecchhhccCCCcceeeccCCCcccc------------------------cC--------------------CcEEe
Confidence 9999999999999999999987543110 11 22222
Q ss_pred cCCeEEEEEEEecccc---hhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCC
Q 002671 263 NTAHVYGSVIFTGHDS---KVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKET 339 (894)
Q Consensus 263 nt~~~~g~Vv~tG~~T---k~~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~yl~~~~~ 339 (894)
++|+...++..--+| ++....+.+..+++|-|..++.+..-+.++.++ ++++..-+..|.. .
T Consensus 181 -SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL~-~~~Tl~p~a~y~~---------g---- 245 (681)
T COG2216 181 -SDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFLL-AVATLYPFAIYSG---------G---- 245 (681)
T ss_pred -eeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHHH-HHHhhhhHHHHcC---------C----
Confidence 688999998888888 456667788888999999888765444322221 1111111111110 0
Q ss_pred ccccCCCCCchhHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhccccccccCCCCCeEEeccccccccccceEEE
Q 002671 340 DVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTIL 419 (894)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~l~i~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~e~Lg~v~~I~ 419 (894)
.-..+...+.+++++||..+.--++-+-..++-++ .+.+++.++..+.|..|.||+++
T Consensus 246 ------------~~~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv----------~~~NViA~SGRAVEaaGDvdtli 303 (681)
T COG2216 246 ------------GAASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRV----------TQFNVIATSGRAVEAAGDVDTLL 303 (681)
T ss_pred ------------CCcCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHh----------hhhceeecCcchhhhcCCccEEE
Confidence 01244556778888999987766665555566665 78899999999999999999999
Q ss_pred ecCCCceeecceEEEEEEEcCcccCCCchHHHHHHHHhhhhchhhhhhhhhhcccCCCCCccchhhhcccCCCCcccccc
Q 002671 420 SDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRI 499 (894)
Q Consensus 420 ~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 499 (894)
.|||||+|-|+-.-..+...+.
T Consensus 304 LDKTGTIT~GnR~A~~f~p~~g---------------------------------------------------------- 325 (681)
T COG2216 304 LDKTGTITLGNRQASEFIPVPG---------------------------------------------------------- 325 (681)
T ss_pred ecccCceeecchhhhheecCCC----------------------------------------------------------
Confidence 9999999987754443321110
Q ss_pred CCCccccccccccCCCCCCChhHHHHHHHHHhhcceeeecccCCCCCeeeecCChhHHHHHHHHHHCCcEEEEEcCCeEE
Q 002671 500 KGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVF 579 (894)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~i~ 579 (894)
...+++..+..+++-. -+.|..+.+++.|++.|+....+..
T Consensus 326 ---------------------v~~~~la~aa~lsSl~--------------DeTpEGrSIV~LA~~~~~~~~~~~~---- 366 (681)
T COG2216 326 ---------------------VSEEELADAAQLASLA--------------DETPEGRSIVELAKKLGIELREDDL---- 366 (681)
T ss_pred ---------------------CCHHHHHHHHHHhhhc--------------cCCCCcccHHHHHHHhccCCCcccc----
Confidence 0112344444444322 2578899999999999865433110
Q ss_pred EEecCCCCCCCceeEEEEEEeecCCCCCceEEEEEEcCCCcEEEEEccchhhhhHhhccCccccHHHHHHHHHHHHhcCC
Q 002671 580 IRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGL 659 (894)
Q Consensus 580 i~~~~~~~g~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Gl 659 (894)
. .--...||+...|...+-.. ++ .-+-|||...|.......+.+.++.+....++-++.|-
T Consensus 367 -------------~--~~~~fvpFtA~TRmSGvd~~--~~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GG 427 (681)
T COG2216 367 -------------Q--SHAEFVPFTAQTRMSGVDLP--GG--REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGG 427 (681)
T ss_pred -------------c--ccceeeecceecccccccCC--CC--ceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCC
Confidence 0 01245799988776665543 33 67789999999999988777789999999999999999
Q ss_pred eEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhCHHHHHHHHHHhhhcccEEEEeeeecccccCChHHHHHHHHHcCCeEEE
Q 002671 660 RTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWV 739 (894)
Q Consensus 660 r~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~~ 739 (894)
.+|+++ .|-.++|++.++|-+++|.+|-+.+||+.|||.+|
T Consensus 428 TPL~V~---------------------------------------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM 468 (681)
T COG2216 428 TPLVVV---------------------------------------ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVM 468 (681)
T ss_pred CceEEE---------------------------------------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEE
Confidence 999999 36689999999999999999999999999999999
Q ss_pred EcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhhhhhhccCCCCCceEEEEeCchhhh
Q 002671 740 LTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAY 819 (894)
Q Consensus 740 lTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~ 819 (894)
+|||++.||..||.+.|+.+
T Consensus 469 ~TGDN~~TAa~IA~EAGVDd------------------------------------------------------------ 488 (681)
T COG2216 469 ITGDNPLTAAAIAAEAGVDD------------------------------------------------------------ 488 (681)
T ss_pred EeCCCHHHHHHHHHHhCchh------------------------------------------------------------
Confidence 99999999999999999853
Q ss_pred hcchHHHHHHHHHhhccCeEEEEeCCchhHHHHHHHHhhcCCCEEEEEcCChhcHHHHHhCCccEEecCccccCC
Q 002671 820 ALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGCDG 894 (894)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~vv~~r~~P~qK~~iv~~lk~~~~~~v~~iGDG~ND~~ml~~AdvGI~i~g~eg~qa 894 (894)
..++++|++|..+++.-|. .|+.|+|+|||.||+|+|.+||||+||-. |+||
T Consensus 489 --------------------fiAeatPEdK~~~I~~eQ~-~grlVAMtGDGTNDAPALAqAdVg~AMNs--GTqA 540 (681)
T COG2216 489 --------------------FIAEATPEDKLALIRQEQA-EGRLVAMTGDGTNDAPALAQADVGVAMNS--GTQA 540 (681)
T ss_pred --------------------hhhcCChHHHHHHHHHHHh-cCcEEEEcCCCCCcchhhhhcchhhhhcc--ccHH
Confidence 5678999999999999998 89999999999999999999999999954 6665
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=99.97 E-value=9.5e-31 Score=274.78 Aligned_cols=222 Identities=25% Similarity=0.361 Sum_probs=186.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhchhhhcc---ce-EEEEeCCCeEEEeeccccccCcEEEeecCcccCceEEEeeecCCCC
Q 002671 109 LAIVVGVSMAKEALEDWRRFMQDKEVNA---RK-VSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDG 184 (894)
Q Consensus 109 l~~v~~~~~~~~~~~d~~r~k~~~~~n~---~~-~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G 184 (894)
++++++++.+.+.+.++++++..+.+++ .+ ++|+ |+|+++.++|++|+|||||+|++||.+||||+||+ +|
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~-r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~----~g 76 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVI-RDGRWQKIPSSELVPGDIIILKAGDIVPADGILLE----SG 76 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEE-ETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEE----SS
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEE-eccccccchHhhccceeeeecccccccccCcccee----cc
Confidence 4577788888899999999999887765 34 8898 89999999999999999999999999999999998 27
Q ss_pred cEEEEecccCCCCcceeecccccCCCCCchhhhccceeEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeecceEeecC
Q 002671 185 ICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNT 264 (894)
Q Consensus 185 ~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt 264 (894)
.++||||.||||+.|+.|.+. +++..|++++||.+. +
T Consensus 77 ~~~vd~s~ltGes~pv~k~~~------------------------------------------~~~~~~~i~~Gs~v~-~ 113 (230)
T PF00122_consen 77 SAYVDESALTGESEPVKKTPL------------------------------------------PLNPGNIIFAGSIVV-S 113 (230)
T ss_dssp EEEEECHHHHSBSSEEEESSS------------------------------------------CCCTTTEE-TTEEEE-E
T ss_pred ccccccccccccccccccccc------------------------------------------cccccchhhcccccc-c
Confidence 799999999999999999863 456788999999999 8
Q ss_pred CeEEEEEEEecccchhhhccC---CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCcc
Q 002671 265 AHVYGSVIFTGHDSKVMQNAT---TSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDV 341 (894)
Q Consensus 265 ~~~~g~Vv~tG~~Tk~~~~~~---~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~yl~~~~~~~ 341 (894)
||++++|++||.+|+++++.. ..+.+++++++.++++..+++++.++++++++++++++ .....|+
T Consensus 114 g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-------- 182 (230)
T PF00122_consen 114 GWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIIILAIAILVFIIWFFN---DSGISFF-------- 182 (230)
T ss_dssp EEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHHHHHHHHHHHHCHTG---STTCHCC--------
T ss_pred cccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcccccchhhhccceec---ccccccc--------
Confidence 999999999999997755444 55667799999999999999998888888877665543 1111332
Q ss_pred ccCCCCCchhHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHhccccccccCCCCCeEEeccccccc
Q 002671 342 YFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEE 411 (894)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~l~i~~~~~~~~i~~d~~m~~~~~~~~~~vr~~~~~e~ 411 (894)
..|..++.+++.++|++|+++++++...++.++ .++++++|+++++|.
T Consensus 183 ------------~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~----------~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 183 ------------KSFLFAISLLIVLIPCALPLALPLSLAIAARRL----------AKNGIIVKNLSALEA 230 (230)
T ss_dssp ------------HHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHH----------HHTTEEESSTTHHHH
T ss_pred ------------cccccccceeeeecccceeehHHHHHHHHHHHH----------HHCCEEEeCcccccC
Confidence 578889999999999999999999999999999 789999999999884
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.87 E-value=8.6e-22 Score=204.46 Aligned_cols=97 Identities=29% Similarity=0.506 Sum_probs=90.3
Q ss_pred ccEEEEeeeecccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHH
Q 002671 706 DLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKD 785 (894)
Q Consensus 706 dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 785 (894)
++.++|.+.+.|++|++++++|+.|+++|++++|+|||+..+|..+|+++||..
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-------------------------- 168 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-------------------------- 168 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS--------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc--------------------------
Confidence 678999999999999999999999999999999999999999999999999932
Q ss_pred hHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcchHHHHHHHHHhhccCeEEEEeC--CchhH--HHHHHHHhhcCC
Q 002671 786 NILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRV--SPKQK--ALVTRLVKEGTG 861 (894)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~--~P~qK--~~iv~~lk~~~~ 861 (894)
..+++++ +|++| ..+++.++. .+
T Consensus 169 ----------------------------------------------------~~v~a~~~~kP~~k~~~~~i~~l~~-~~ 195 (215)
T PF00702_consen 169 ----------------------------------------------------SIVFARVIGKPEPKIFLRIIKELQV-KP 195 (215)
T ss_dssp ----------------------------------------------------EEEEESHETTTHHHHHHHHHHHHTC-TG
T ss_pred ----------------------------------------------------ccccccccccccchhHHHHHHHHhc-CC
Confidence 3389999 99999 999999985 45
Q ss_pred CEEEEEcCChhcHHHHHhCC
Q 002671 862 KTTLAIGDGANDVGMIQEAD 881 (894)
Q Consensus 862 ~~v~~iGDG~ND~~ml~~Ad 881 (894)
..|+|||||.||++|+++||
T Consensus 196 ~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 196 GEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp GGEEEEESSGGHHHHHHHSS
T ss_pred CEEEEEccCHHHHHHHHhCc
Confidence 69999999999999999997
No 36
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.51 E-value=1.9e-14 Score=126.43 Aligned_cols=90 Identities=36% Similarity=0.591 Sum_probs=71.2
Q ss_pred hhcceeeecccCCCCCeeeecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEEEeecCCCCCceE
Q 002671 531 AICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRM 610 (894)
Q Consensus 531 alc~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~i~i~~~~~~~g~~~~~~~~il~~~~F~s~rkrm 610 (894)
++||++....+++.+..+ ..++|+|.||+.|+..+|..+.. +.....|++++.+||||+||||
T Consensus 1 ~LCn~a~~~~~~~~~~~~-~~G~ptE~ALl~~~~~~g~~~~~----------------~~~~~~~~~~~~~pF~S~rK~m 63 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEE-IIGDPTEKALLRFAKKLGVGIDI----------------KEIRSKYKIVAEIPFDSERKRM 63 (91)
T ss_pred CCccccEeecCCCCcccc-ccCCcCHHHHHHHHHHcCCCCcH----------------HHHHhhcceeEEEccCccccee
Confidence 589999876555333322 57899999999999999754321 1135789999999999999999
Q ss_pred EEEEEcCCCcEEEEEccchhhhhHhhcc
Q 002671 611 SVIVRDEDGQILLLCKGADSIIFDRLSK 638 (894)
Q Consensus 611 sviv~~~~g~~~l~~KGa~~~i~~~~~~ 638 (894)
+||++ .++.+++|+|||||.|+++|+.
T Consensus 64 svv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 64 SVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred EEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 99999 3446788999999999999974
No 37
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.42 E-value=9.3e-13 Score=117.27 Aligned_cols=106 Identities=25% Similarity=0.379 Sum_probs=95.3
Q ss_pred cEEEEeeeecccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHh
Q 002671 707 LILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDN 786 (894)
Q Consensus 707 l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 786 (894)
+...+.++---+|=++++++|++|++. ++|++.|||..-+....|.-.|+-..
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~-------------------------- 71 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE-------------------------- 71 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee--------------------------
Confidence 467788888889999999999999999 99999999999999999998886421
Q ss_pred HHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcchHHHHHHHHHhhccCeEEEEeCCchhHHHHHHHHhhcCCCEEEE
Q 002671 787 ILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLA 866 (894)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~~P~qK~~iv~~lk~~~~~~v~~ 866 (894)
.+++...|+.|+.+++.|++ +++.|.|
T Consensus 72 ----------------------------------------------------rv~a~a~~e~K~~ii~eLkk-~~~k~vm 98 (152)
T COG4087 72 ----------------------------------------------------RVFAGADPEMKAKIIRELKK-RYEKVVM 98 (152)
T ss_pred ----------------------------------------------------eeecccCHHHHHHHHHHhcC-CCcEEEE
Confidence 18889999999999999998 8899999
Q ss_pred EcCChhcHHHHHhCCccEEecCcccc
Q 002671 867 IGDGANDVGMIQEADIGIGISGVEGC 892 (894)
Q Consensus 867 iGDG~ND~~ml~~AdvGI~i~g~eg~ 892 (894)
+|||+||.+||+.||+||..-+.||.
T Consensus 99 VGnGaND~laLr~ADlGI~tiq~e~v 124 (152)
T COG4087 99 VGNGANDILALREADLGICTIQQEGV 124 (152)
T ss_pred ecCCcchHHHhhhcccceEEeccCCc
Confidence 99999999999999999977676774
No 38
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.78 E-value=3.1e-08 Score=101.16 Aligned_cols=109 Identities=19% Similarity=0.125 Sum_probs=82.5
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhhhh
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (894)
++.+++.+.|+.|++.| ++.|+||-....+..++..+|+..--...+.++...
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g-------------------------- 120 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 120 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCC--------------------------
Confidence 57899999999999975 999999999999999999999842111111111000
Q ss_pred hhccCCCCCceEEEEeCchhhhhcchHHHHHHHHHhhccCeEEEEeCCchhHHHHHHHHhhcCCCEEEEEcCChhcHHHH
Q 002671 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (894)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~~P~qK~~iv~~lk~~~~~~v~~iGDG~ND~~ml 877 (894)
.++|. .. ..|..|..+++.+++ .+..++++|||.||++|+
T Consensus 121 -------------~~tG~------------------------~~--~~~~~K~~~l~~l~~-~~~~~v~vGDs~nDl~ml 160 (203)
T TIGR02137 121 -------------RVVGY------------------------QL--RQKDPKRQSVIAFKS-LYYRVIAAGDSYNDTTML 160 (203)
T ss_pred -------------eeECe------------------------ee--cCcchHHHHHHHHHh-hCCCEEEEeCCHHHHHHH
Confidence 11221 11 357789999999976 676899999999999999
Q ss_pred HhCCccEEecCccccC
Q 002671 878 QEADIGIGISGVEGCD 893 (894)
Q Consensus 878 ~~AdvGI~i~g~eg~q 893 (894)
+.|++||++..++..+
T Consensus 161 ~~Ag~~ia~~ak~~~~ 176 (203)
T TIGR02137 161 SEAHAGILFHAPENVI 176 (203)
T ss_pred HhCCCCEEecCCHHHH
Confidence 9999999998887643
No 39
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.78 E-value=4.5e-08 Score=100.48 Aligned_cols=110 Identities=22% Similarity=0.261 Sum_probs=84.5
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhhh
Q 002671 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (894)
Q Consensus 717 D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (894)
.++.+++.+.++.++++|.+||++||=...-+..+|+.+|+...-...+.+...
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG-------------------------- 129 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG-------------------------- 129 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC--------------------------
Confidence 789999999999999999999999999999999999999996543333322210
Q ss_pred hhhccCCCCCceEEEEeCchhhhhcchHHHHHHHHHhhccCeEEEEe-CCchhHHHHHHHHhhcCC---CEEEEEcCChh
Q 002671 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCR-VSPKQKALVTRLVKEGTG---KTTLAIGDGAN 872 (894)
Q Consensus 797 ~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r-~~P~qK~~iv~~lk~~~~---~~v~~iGDG~N 872 (894)
+++|. +..+ +..+.|...++.+.+..| +.+.|+|||.|
T Consensus 130 --------------~ltG~------------------------v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~n 171 (212)
T COG0560 130 --------------KLTGR------------------------VVGPICDGEGKAKALRELAAELGIPLEETVAYGDSAN 171 (212)
T ss_pred --------------EEece------------------------eeeeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchh
Confidence 22332 3333 344679888866655344 36999999999
Q ss_pred cHHHHHhCCccEEecCcc
Q 002671 873 DVGMIQEADIGIGISGVE 890 (894)
Q Consensus 873 D~~ml~~AdvGI~i~g~e 890 (894)
|.|||+.|+.+|++..+.
T Consensus 172 Dlpml~~ag~~ia~n~~~ 189 (212)
T COG0560 172 DLPMLEAAGLPIAVNPKP 189 (212)
T ss_pred hHHHHHhCCCCeEeCcCH
Confidence 999999999999997654
No 40
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.68 E-value=2.6e-08 Score=107.25 Aligned_cols=42 Identities=14% Similarity=0.134 Sum_probs=38.5
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~ 759 (894)
.+-+.+.++|++|+++|++++++||+....+..+..++++..
T Consensus 20 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 61 (270)
T PRK10513 20 TISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQ 61 (270)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCC
Confidence 577889999999999999999999999999999999998743
No 41
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.67 E-value=4.6e-08 Score=105.43 Aligned_cols=49 Identities=24% Similarity=0.405 Sum_probs=41.8
Q ss_pred EEeCCchh--HHHHHHHHhhcCC---CEEEEEcCChhcHHHHHhCCccEEecCc
Q 002671 841 CCRVSPKQ--KALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGV 889 (894)
Q Consensus 841 ~~r~~P~q--K~~iv~~lk~~~~---~~v~~iGDG~ND~~ml~~AdvGI~i~g~ 889 (894)
+..++|.. |+..++.+.+..| ..|++||||.||++||+.|+.||||++.
T Consensus 179 ~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na 232 (272)
T PRK15126 179 CLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNA 232 (272)
T ss_pred EEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCC
Confidence 55677765 9999999987644 5799999999999999999999999764
No 42
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.63 E-value=6.7e-08 Score=103.72 Aligned_cols=49 Identities=18% Similarity=0.281 Sum_probs=42.6
Q ss_pred Eeeeeccc-ccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002671 711 GATAVEDK-LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (894)
Q Consensus 711 G~~~ieD~-lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~ 759 (894)
|.+.-.+. +.+.+.++|+++++.|+++.++||++...+..+..++++..
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~ 61 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG 61 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc
Confidence 44444454 78899999999999999999999999999999999999864
No 43
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.59 E-value=7.8e-08 Score=102.00 Aligned_cols=173 Identities=18% Similarity=0.265 Sum_probs=93.0
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc------------cCceEEEEecCCchhhHHHHHHHHH
Q 002671 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR------------QGMKQICITALNSDSVGKAAKEAVK 784 (894)
Q Consensus 717 D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~------------~~~~~~~i~~~~~~~~~~~~~~~~~ 784 (894)
..+-+.+.++|++|+++|++++++||+.+..+..+..++++-. ...+.+.....+.+.+........+
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 3466889999999999999999999999999999999888651 1222222233333333333333322
Q ss_pred HhHHHHHHhhhhhhhccC-------------------------CCCCceEEEEeCc-hhhhhcchHHHHHHHHHh-hccC
Q 002671 785 DNILMQITNASQMIKLER-------------------------DPHAAYALIIEGK-TLAYALEDDMKHHFLGLA-VECA 837 (894)
Q Consensus 785 ~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~lvi~G~-~l~~~~~~~~~~~~~~~~-~~~~ 837 (894)
..+...+........... ....-..+.+... .-...+.+++...+.... ....
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 221100000000000000 0000011111111 000011122222222111 0001
Q ss_pred eEEEEeCCc--hhHHHHHHHHhhcCC---CEEEEEcCChhcHHHHHhCCccEEecCc
Q 002671 838 SVICCRVSP--KQKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGV 889 (894)
Q Consensus 838 ~vv~~r~~P--~qK~~iv~~lk~~~~---~~v~~iGDG~ND~~ml~~AdvGI~i~g~ 889 (894)
..-+..++| ..|+..++.+.+..| +.+++|||+.||.+||+.|+.||+|++.
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na 230 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNA 230 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCC
Confidence 113445556 459999998876533 6899999999999999999999999764
No 44
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.55 E-value=3.2e-07 Score=95.84 Aligned_cols=166 Identities=16% Similarity=0.200 Sum_probs=86.6
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCc------hh-hHHHHH-HHHHHhHHH
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNS------DS-VGKAAK-EAVKDNILM 789 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~------~~-~~~~~~-~~~~~~~~~ 789 (894)
.+.+.+.++|++|+++||+++++||++...+..+++.+++.. ..+..++.-. +. ...... ......+..
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPD---PVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIA 91 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC---eEEEecCcEEEeCCCCceEEecccCHHHHHHHHHh
Confidence 467888899999999999999999999999999999988422 2333333200 00 000000 000000000
Q ss_pred HHHhhhhhhhccCCCCCceEEEEeCchhhhhcchHHHHHHHHHhhccCeEEEEeCCc--hhHHHHHHHHhhcCC---CEE
Q 002671 790 QITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSP--KQKALVTRLVKEGTG---KTT 864 (894)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~~P--~qK~~iv~~lk~~~~---~~v 864 (894)
.. ..................+......+.. ..+..++......+....+..+.| ..|...++.+.+..| ..+
T Consensus 92 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~ 168 (225)
T TIGR01482 92 KT-FPFSRLKVQYPRRASLVKMRYGIDVDTV--REIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGET 168 (225)
T ss_pred cc-cchhhhccccccccceEEEeecCCHHHH--HHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHE
Confidence 00 0000000000001111111111111100 111111111000011123445555 469888888866434 579
Q ss_pred EEEcCChhcHHHHHhCCccEEecCc
Q 002671 865 LAIGDGANDVGMIQEADIGIGISGV 889 (894)
Q Consensus 865 ~~iGDG~ND~~ml~~AdvGI~i~g~ 889 (894)
++|||+.||++|++.|++|++|++.
T Consensus 169 i~~GD~~NDi~m~~~ag~~vam~Na 193 (225)
T TIGR01482 169 LVCGDSENDIDLFEVPGFGVAVANA 193 (225)
T ss_pred EEECCCHhhHHHHHhcCceEEcCCh
Confidence 9999999999999999999999764
No 45
>PRK10976 putative hydrolase; Provisional
Probab=98.55 E-value=8.9e-08 Score=102.88 Aligned_cols=49 Identities=31% Similarity=0.428 Sum_probs=41.4
Q ss_pred EEeCCchh--HHHHHHHHhhcCC---CEEEEEcCChhcHHHHHhCCccEEecCc
Q 002671 841 CCRVSPKQ--KALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGV 889 (894)
Q Consensus 841 ~~r~~P~q--K~~iv~~lk~~~~---~~v~~iGDG~ND~~ml~~AdvGI~i~g~ 889 (894)
+..+.|.. |+..++.+.++.| ..|++||||.||++||+.|+.||||++.
T Consensus 181 ~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA 234 (266)
T PRK10976 181 CLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNA 234 (266)
T ss_pred eEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCC
Confidence 45667754 9999999877654 5799999999999999999999999764
No 46
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.51 E-value=2.3e-06 Score=92.14 Aligned_cols=39 Identities=8% Similarity=0.112 Sum_probs=35.9
Q ss_pred ccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccc
Q 002671 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (894)
Q Consensus 719 lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl 757 (894)
+-+.+.++|++|+++||+++++||+....+..++.++|+
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~ 63 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGL 63 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCC
Confidence 346688999999999999999999999999999999987
No 47
>PLN02887 hydrolase family protein
Probab=98.49 E-value=2e-07 Score=108.91 Aligned_cols=41 Identities=17% Similarity=0.272 Sum_probs=37.4
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
.+-+.+.++|++|+++|++++++||+....+..+..++++.
T Consensus 325 ~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~ 365 (580)
T PLN02887 325 QISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVDLA 365 (580)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcc
Confidence 47788999999999999999999999999999999888763
No 48
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.48 E-value=5.8e-07 Score=98.17 Aligned_cols=109 Identities=28% Similarity=0.284 Sum_probs=77.9
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhhhh
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (894)
++.+|+.+.|+.|++.|+++.++||.....+..+..++|+..--.+.+.+...
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg--------------------------- 233 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDG--------------------------- 233 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECC---------------------------
Confidence 47899999999999999999999999988888888888884211111111100
Q ss_pred hhccCCCCCceEEEEeCchhhhhcchHHHHHHHHHhhccCeEEEEeCCchhHHHHHHHHhhcCC---CEEEEEcCChhcH
Q 002671 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTG---KTTLAIGDGANDV 874 (894)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~~P~qK~~iv~~lk~~~~---~~v~~iGDG~ND~ 874 (894)
.++|..... + +..+.|..+++.+.+..| ..|+|||||.||.
T Consensus 234 -------------~ltg~v~g~--------------------i---v~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl 277 (322)
T PRK11133 234 -------------KLTGNVLGD--------------------I---VDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDL 277 (322)
T ss_pred -------------EEEeEecCc--------------------c---CCcccHHHHHHHHHHHcCCChhhEEEEECCHHHH
Confidence 111111100 1 234678888888876444 5799999999999
Q ss_pred HHHHhCCccEEecCc
Q 002671 875 GMIQEADIGIGISGV 889 (894)
Q Consensus 875 ~ml~~AdvGI~i~g~ 889 (894)
+|++.|++||++-.+
T Consensus 278 ~m~~~AGlgiA~nAk 292 (322)
T PRK11133 278 PMIKAAGLGIAYHAK 292 (322)
T ss_pred HHHHHCCCeEEeCCC
Confidence 999999999999544
No 49
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.47 E-value=7e-07 Score=93.70 Aligned_cols=164 Identities=14% Similarity=0.164 Sum_probs=88.1
Q ss_pred ccc-ccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecC-------CchhhHHHHHHHHHHhH
Q 002671 716 EDK-LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITAL-------NSDSVGKAAKEAVKDNI 787 (894)
Q Consensus 716 eD~-lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~-------~~~~~~~~~~~~~~~~~ 787 (894)
.|+ +-+.+.++|++|+++|++++++||++...+..+++.+++-. ..+..|+. .......... ... .+
T Consensus 17 ~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~~~~~-~~~-~~ 91 (230)
T PRK01158 17 KDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSG---PVIAENGGVISVGFDGKRIFLGDIE-ECE-KA 91 (230)
T ss_pred CCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC---cEEEecCeEEEEcCCCCEEEEcchH-HHH-HH
Confidence 444 67889999999999999999999999999999999988642 22222222 1000000000 000 00
Q ss_pred HHHHHhhhh----hhhccCCCCCceEEEE-eCchhhhhcchHHHHHHHHHhhcc---CeEEEEeCCchh--HHHHHHHHh
Q 002671 788 LMQITNASQ----MIKLERDPHAAYALII-EGKTLAYALEDDMKHHFLGLAVEC---ASVICCRVSPKQ--KALVTRLVK 857 (894)
Q Consensus 788 ~~~~~~~~~----~~~~~~~~~~~~~lvi-~G~~l~~~~~~~~~~~~~~~~~~~---~~vv~~r~~P~q--K~~iv~~lk 857 (894)
...+..... .+...........+.+ ..... ++....+....... .+..+..+.|.. |+..++.+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~ 166 (230)
T PRK01158 92 YSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPV-----EEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLA 166 (230)
T ss_pred HHHHHHhccccceeeecCCcccccceeeecccccH-----HHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHH
Confidence 000100000 0000000000011111 11111 11222221111111 111244666655 999999887
Q ss_pred hcCC---CEEEEEcCChhcHHHHHhCCccEEecCc
Q 002671 858 EGTG---KTTLAIGDGANDVGMIQEADIGIGISGV 889 (894)
Q Consensus 858 ~~~~---~~v~~iGDG~ND~~ml~~AdvGI~i~g~ 889 (894)
+..| ..+++||||.||.+|++.|++||+|++.
T Consensus 167 ~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na 201 (230)
T PRK01158 167 ELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVANA 201 (230)
T ss_pred HHhCCCHHHEEEECCchhhHHHHHhcCceEEecCc
Confidence 6543 4699999999999999999999999764
No 50
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.40 E-value=9.9e-07 Score=95.09 Aligned_cols=41 Identities=17% Similarity=0.178 Sum_probs=37.5
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
++-+.+.++|++|+++|++++++||+....+..+.+++++-
T Consensus 20 ~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 60 (272)
T PRK10530 20 TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALD 60 (272)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCC
Confidence 47788999999999999999999999999999999998763
No 51
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.37 E-value=4.5e-06 Score=89.08 Aligned_cols=40 Identities=10% Similarity=0.072 Sum_probs=36.2
Q ss_pred ccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 719 lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
.-+.+.++|+.|+++|++++++||+....+..+.+++|+.
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE 56 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 4456899999999999999999999999999999999863
No 52
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.36 E-value=2.4e-06 Score=88.63 Aligned_cols=161 Identities=15% Similarity=0.234 Sum_probs=86.0
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecC-----Cchh-hHHHHHHHH-HHhHHHH
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITAL-----NSDS-VGKAAKEAV-KDNILMQ 790 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~-----~~~~-~~~~~~~~~-~~~~~~~ 790 (894)
++-+.+.++|++|+++|++++++||+++..+..+++.+++.. ..+..|+. .... ......... .......
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~---~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSG---PVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKR 94 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCC---cEEEccCcEEEeCCCcEEEecccchhhHHHhhhhh
Confidence 478899999999999999999999999999999999888642 22222221 0100 000000000 0000000
Q ss_pred HHhhhhhhhccCCCCCceEEEEeCchhhhhcchHHHHHHHHHhhcc-CeEEEEeCCc--hhHHHHHHHHhhcCC---CEE
Q 002671 791 ITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVEC-ASVICCRVSP--KQKALVTRLVKEGTG---KTT 864 (894)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~-~~vv~~r~~P--~qK~~iv~~lk~~~~---~~v 864 (894)
.. ...... ........+..+++... .+...+....... .+..+..++| ..|+..++.+.+..+ ..+
T Consensus 95 ~~--~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~ 166 (215)
T TIGR01487 95 FP--RDRLSN-EYPRASLVIMREGKDVD-----EVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEV 166 (215)
T ss_pred hh--hhhccc-ccceeEEEEecCCccHH-----HHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHE
Confidence 00 000000 00011111222222211 1111111110000 0012334444 469999998876544 359
Q ss_pred EEEcCChhcHHHHHhCCccEEecCc
Q 002671 865 LAIGDGANDVGMIQEADIGIGISGV 889 (894)
Q Consensus 865 ~~iGDG~ND~~ml~~AdvGI~i~g~ 889 (894)
++|||+.||.+|++.|++|++|...
T Consensus 167 i~iGDs~ND~~ml~~ag~~vam~na 191 (215)
T TIGR01487 167 AAIGDSENDIDLFRVVGFKVAVANA 191 (215)
T ss_pred EEECCCHHHHHHHHhCCCeEEcCCc
Confidence 9999999999999999999999753
No 53
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.33 E-value=1.1e-06 Score=84.70 Aligned_cols=110 Identities=20% Similarity=0.301 Sum_probs=76.2
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCce--EEEEecCCchhhHHHHHHHHHHhHHHHHHhhh
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMK--QICITALNSDSVGKAAKEAVKDNILMQITNAS 795 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (894)
.+-+|++|.++.|++.|.+|.++||--...+..+|.++||-..+.. .+.++..-
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~G------------------------ 143 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDG------------------------ 143 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCC------------------------
Confidence 3459999999999999999999999999999999999999643211 11111000
Q ss_pred hhhhccCCCCCceEEEEeCchhhhhcchHHHHHHHHHhhccCeEEEEeCCchhHHHHHHHHhhc-CCCEEEEEcCChhcH
Q 002671 796 QMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG-TGKTTLAIGDGANDV 874 (894)
Q Consensus 796 ~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~~P~qK~~iv~~lk~~-~~~~v~~iGDG~ND~ 874 (894)
. ...++... .-+...-|+.+++.+++. ..+.++|||||+||.
T Consensus 144 -k-------------~~gfd~~~-----------------------ptsdsggKa~~i~~lrk~~~~~~~~mvGDGatDl 186 (227)
T KOG1615|consen 144 -K-------------YLGFDTNE-----------------------PTSDSGGKAEVIALLRKNYNYKTIVMVGDGATDL 186 (227)
T ss_pred -c-------------ccccccCC-----------------------ccccCCccHHHHHHHHhCCChheeEEecCCcccc
Confidence 0 00001110 002234699999999874 346899999999999
Q ss_pred HHHHhCCccEEecC
Q 002671 875 GMIQEADIGIGISG 888 (894)
Q Consensus 875 ~ml~~AdvGI~i~g 888 (894)
+|+..||.=||..|
T Consensus 187 ea~~pa~afi~~~g 200 (227)
T KOG1615|consen 187 EAMPPADAFIGFGG 200 (227)
T ss_pred ccCCchhhhhccCC
Confidence 99999766555543
No 54
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.30 E-value=4.9e-06 Score=86.72 Aligned_cols=43 Identities=7% Similarity=0.027 Sum_probs=38.2
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 716 eD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
.+..-+++.++|++|+++|++++++||+.+..+..+..++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4555567999999999999999999999999999999999963
No 55
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.28 E-value=3.4e-06 Score=85.64 Aligned_cols=93 Identities=20% Similarity=0.292 Sum_probs=68.6
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhhhhhhc
Q 002671 721 KGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKL 800 (894)
Q Consensus 721 ~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (894)
+++++.|+.++++|++++|+||.....+.++++.+|+.... ++......
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~--v~~~~~~~----------------------------- 140 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN--VIGNELFD----------------------------- 140 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG--EEEEEEEC-----------------------------
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE--EEEEeeee-----------------------------
Confidence 66669999999999999999999999999999999986432 11111000
Q ss_pred cCCCCCceEEEEeCchhhhhcchHHHHHHHHHhhccCeEEEEeCCch-h--HHHHHHHH---h--hcCCCEEEEEcCChh
Q 002671 801 ERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPK-Q--KALVTRLV---K--EGTGKTTLAIGDGAN 872 (894)
Q Consensus 801 ~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~~P~-q--K~~iv~~l---k--~~~~~~v~~iGDG~N 872 (894)
.+ ......+++|. + |...++.+ . ......++++|||.|
T Consensus 141 ------------~~----------------------~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~ 186 (192)
T PF12710_consen 141 ------------NG----------------------GGIFTGRITGSNCGGKAEALKELYIRDEEDIDPDRVIAIGDSIN 186 (192)
T ss_dssp ------------TT----------------------CCEEEEEEEEEEESHHHHHHHHHHHHHHHTHTCCEEEEEESSGG
T ss_pred ------------cc----------------------cceeeeeECCCCCCcHHHHHHHHHHHhhcCCCCCeEEEEECCHH
Confidence 00 11245555655 4 99999999 1 125789999999999
Q ss_pred cHHHHH
Q 002671 873 DVGMIQ 878 (894)
Q Consensus 873 D~~ml~ 878 (894)
|++|||
T Consensus 187 D~~~lr 192 (192)
T PF12710_consen 187 DLPMLR 192 (192)
T ss_dssp GHHHHH
T ss_pred HHHHhC
Confidence 999997
No 56
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.25 E-value=2.4e-06 Score=91.17 Aligned_cols=41 Identities=22% Similarity=0.284 Sum_probs=37.3
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
++.+++.++|++|+++|++++++||++...+..+..++++.
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~ 56 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLD 56 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 47788999999999999999999999999999999888763
No 57
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.15 E-value=8.1e-06 Score=79.74 Aligned_cols=33 Identities=15% Similarity=0.196 Sum_probs=31.1
Q ss_pred HHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 726 CIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 726 ~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
+|+.|++.|+++.|+||+....+..+....|+.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~ 68 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGIT 68 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999998874
No 58
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.15 E-value=2.2e-05 Score=83.48 Aligned_cols=172 Identities=12% Similarity=0.142 Sum_probs=91.8
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCC--------chhh-HHHHHHHHHHh
Q 002671 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALN--------SDSV-GKAAKEAVKDN 786 (894)
Q Consensus 716 eD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~--------~~~~-~~~~~~~~~~~ 786 (894)
..++.+.+.++|+++++.|+.++++||+....+..+..+.++..++ -.+.-++.. .+.. ...........
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~-~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~ 97 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPD-IWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRD 97 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCC-EEEEcCCceEEeCCCCcCCHHHHHHHhcccCHH
Confidence 3456788889999999999999999999999999999988876553 222222221 0100 00000000000
Q ss_pred HHHHHHhhhhhhhcc---CCCCCceEEEEeCchhhhhcchHHHHHHHHHhhccCeEE----EEeCCc--hhHHHHHHHHh
Q 002671 787 ILMQITNASQMIKLE---RDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVI----CCRVSP--KQKALVTRLVK 857 (894)
Q Consensus 787 ~~~~~~~~~~~~~~~---~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv----~~r~~P--~qK~~iv~~lk 857 (894)
....+......+... .....++.+....+..... -.++...+......++.++ +..+.| ..|...++.+.
T Consensus 98 ~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~-~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~ 176 (249)
T TIGR01485 98 IVVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEV-IKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLL 176 (249)
T ss_pred HHHHHHhcCcccccCCccccCCeeEEEEechhhhhHH-HHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHH
Confidence 000011101111110 1112222332222211111 1112222222111222212 224555 45999999887
Q ss_pred hcCC---CEEEEEcCChhcHHHHHh-CCccEEecCc
Q 002671 858 EGTG---KTTLAIGDGANDVGMIQE-ADIGIGISGV 889 (894)
Q Consensus 858 ~~~~---~~v~~iGDG~ND~~ml~~-AdvGI~i~g~ 889 (894)
+..+ ..|+++||+.||++|++. ++.||+|++.
T Consensus 177 ~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na 212 (249)
T TIGR01485 177 QKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNA 212 (249)
T ss_pred HHcCCCccCEEEEECChhHHHHHHccCCcEEEECCC
Confidence 6533 579999999999999998 6799999764
No 59
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=98.14 E-value=2.6e-05 Score=91.09 Aligned_cols=39 Identities=8% Similarity=-0.030 Sum_probs=35.0
Q ss_pred ccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccc
Q 002671 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (894)
Q Consensus 719 lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl 757 (894)
.-+.+.++|+.|+++||+++++||+....+..+++++++
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl 472 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGI 472 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 335678999999999999999999999999999999885
No 60
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.13 E-value=1.2e-05 Score=83.58 Aligned_cols=109 Identities=24% Similarity=0.316 Sum_probs=75.8
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhhhh
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (894)
++.+++++.|+.|++.|+++.|+||.....+..+...+|+..--...+..+..
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~--------------------------- 137 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDG--------------------------- 137 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECC---------------------------
Confidence 58899999999999999999999999999999999999885311111111100
Q ss_pred hhccCCCCCceEEEEeCchhhhhcchHHHHHHHHHhhccCeEEEEe-CCchhHHHHHHHHhhcCC---CEEEEEcCChhc
Q 002671 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCR-VSPKQKALVTRLVKEGTG---KTTLAIGDGAND 873 (894)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r-~~P~qK~~iv~~lk~~~~---~~v~~iGDG~ND 873 (894)
.++|. +.++ ..+..|..+++.+.+..+ ..+++|||+.+|
T Consensus 138 -------------~~~~~------------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D 180 (219)
T TIGR00338 138 -------------KLTGL------------------------VEGPIVDASYKGKTLLILLRKEGISPENTVAVGDGAND 180 (219)
T ss_pred -------------EEEEE------------------------ecCcccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHH
Confidence 00110 1111 123346666665544333 468999999999
Q ss_pred HHHHHhCCccEEecCcc
Q 002671 874 VGMIQEADIGIGISGVE 890 (894)
Q Consensus 874 ~~ml~~AdvGI~i~g~e 890 (894)
++|++.|+++|++.+.+
T Consensus 181 i~aa~~ag~~i~~~~~~ 197 (219)
T TIGR00338 181 LSMIKAAGLGIAFNAKP 197 (219)
T ss_pred HHHHHhCCCeEEeCCCH
Confidence 99999999999997654
No 61
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.09 E-value=2.4e-05 Score=80.42 Aligned_cols=106 Identities=22% Similarity=0.202 Sum_probs=77.0
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhhhh
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (894)
++.+|++++++.|+++ +++.++||-....+..+...+|+..--...+.+....
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------------------------- 120 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG-------------------------- 120 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC--------------------------
Confidence 3579999999999999 9999999999999999999998742111111111000
Q ss_pred hhccCCCCCceEEEEeCchhhhhcchHHHHHHHHHhhccCeEEEEeCCchhHHHHHHHHhhcCCCEEEEEcCChhcHHHH
Q 002671 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (894)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~~P~qK~~iv~~lk~~~~~~v~~iGDG~ND~~ml 877 (894)
.+.|. . -..|..|..+++.++. .+..++|||||.||++|.
T Consensus 121 -------------~i~~~------------------------~--~~~p~~k~~~l~~~~~-~~~~~v~iGDs~~D~~~~ 160 (205)
T PRK13582 121 -------------MITGY------------------------D--LRQPDGKRQAVKALKS-LGYRVIAAGDSYNDTTML 160 (205)
T ss_pred -------------eEECc------------------------c--ccccchHHHHHHHHHH-hCCeEEEEeCCHHHHHHH
Confidence 00110 0 0246778888888876 678899999999999999
Q ss_pred HhCCccEEecCcc
Q 002671 878 QEADIGIGISGVE 890 (894)
Q Consensus 878 ~~AdvGI~i~g~e 890 (894)
+.|++|+.....+
T Consensus 161 ~aa~~~v~~~~~~ 173 (205)
T PRK13582 161 GEADAGILFRPPA 173 (205)
T ss_pred HhCCCCEEECCCH
Confidence 9999999875443
No 62
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.09 E-value=3.6e-05 Score=82.93 Aligned_cols=42 Identities=10% Similarity=0.039 Sum_probs=38.0
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 717 D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
..+-+++.++|+.|++.|++++++||+....+..++.++|+.
T Consensus 20 ~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 20 TYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred CcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 345677999999999999999999999999999999999975
No 63
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.07 E-value=4.6e-05 Score=79.38 Aligned_cols=38 Identities=16% Similarity=0.213 Sum_probs=34.9
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 721 KGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 721 ~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
+.+.++|+.|+++||+++++||+....+..+...+++.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 34789999999999999999999999999999999974
No 64
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.04 E-value=2.7e-05 Score=79.66 Aligned_cols=108 Identities=22% Similarity=0.224 Sum_probs=75.7
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhhhh
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (894)
++++++.++|+.|++.|+++.++||-....+..++..+|+..--...+..+...
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g-------------------------- 133 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKG-------------------------- 133 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCC--------------------------
Confidence 578999999999999999999999999999999999998632100111111000
Q ss_pred hhccCCCCCceEEEEeCchhhhhcchHHHHHHHHHhhccCeEEEEeCCchhHHHHHHHHhhcC---CCEEEEEcCChhcH
Q 002671 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGT---GKTTLAIGDGANDV 874 (894)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~~P~qK~~iv~~lk~~~---~~~v~~iGDG~ND~ 874 (894)
...+ ..+..+.|..|..+++.+.+.. ...+++|||+.||+
T Consensus 134 -------------~~~p------------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~ 176 (201)
T TIGR01491 134 -------------FIQP------------------------DGIVRVTFDNKGEAVERLKRELNPSLTETVAVGDSKNDL 176 (201)
T ss_pred -------------eEec------------------------ceeeEEccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHH
Confidence 0000 0122234666877777665432 34699999999999
Q ss_pred HHHHhCCccEEecC
Q 002671 875 GMIQEADIGIGISG 888 (894)
Q Consensus 875 ~ml~~AdvGI~i~g 888 (894)
+|++.|++++++.+
T Consensus 177 ~~a~~ag~~~a~~~ 190 (201)
T TIGR01491 177 PMFEVADISISLGD 190 (201)
T ss_pred HHHHhcCCeEEECC
Confidence 99999999999843
No 65
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.03 E-value=3.5e-05 Score=79.87 Aligned_cols=112 Identities=14% Similarity=0.246 Sum_probs=74.1
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhhh
Q 002671 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (894)
Q Consensus 717 D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (894)
-++++|+++.++.|++.|+++.|+||.....+..+....+... .++. +.
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~---~i~~-n~--------------------------- 117 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKD---RIYC-NE--------------------------- 117 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcc---cEEe-ce---------------------------
Confidence 4789999999999999999999999999988888887764321 1110 00
Q ss_pred hhhccCCCCCceEEEEeCchhhhhcchHHHHHHHHHhhccCeEEEEeCCchhHHHHHHHHhhcCCCEEEEEcCChhcHHH
Q 002671 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGM 876 (894)
Q Consensus 797 ~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~~P~qK~~iv~~lk~~~~~~v~~iGDG~ND~~m 876 (894)
++++|..+..... . .|. ..+.......|..+++.++. ....++|||||.||..|
T Consensus 118 -------------~~~~~~~~~~~~p-~----------~~~-~~~~~~cg~~K~~~l~~~~~-~~~~~i~iGDg~~D~~~ 171 (214)
T TIGR03333 118 -------------ADFSNEYIHIDWP-H----------PCD-GTCQNQCGCCKPSLIRKLSE-PNDYHIVIGDSVTDVEA 171 (214)
T ss_pred -------------eEeeCCeeEEeCC-C----------CCc-cccccCCCCCHHHHHHHHhh-cCCcEEEEeCCHHHHHH
Confidence 0111211110000 0 000 00011114579999998876 56778999999999999
Q ss_pred HHhCCccEE
Q 002671 877 IQEADIGIG 885 (894)
Q Consensus 877 l~~AdvGI~ 885 (894)
++.||++++
T Consensus 172 a~~Ad~~~a 180 (214)
T TIGR03333 172 AKQSDLCFA 180 (214)
T ss_pred HHhCCeeEe
Confidence 999999776
No 66
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.03 E-value=3.9e-05 Score=80.82 Aligned_cols=47 Identities=28% Similarity=0.418 Sum_probs=39.2
Q ss_pred eCCch--hHHHHHHHHhhcCC---CEEEEEcCChhcHHHHHhCCccEEecCc
Q 002671 843 RVSPK--QKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEADIGIGISGV 889 (894)
Q Consensus 843 r~~P~--qK~~iv~~lk~~~~---~~v~~iGDG~ND~~ml~~AdvGI~i~g~ 889 (894)
.+.|. .|...++.+.++.+ ..++++||+.||.+|++.|++||+|++.
T Consensus 152 ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na 203 (236)
T TIGR02471 152 DVLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNH 203 (236)
T ss_pred EEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCC
Confidence 45664 69999999876544 3689999999999999999999999764
No 67
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.00 E-value=1.7e-05 Score=78.25 Aligned_cols=34 Identities=12% Similarity=0.100 Sum_probs=32.2
Q ss_pred HHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 725 QCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 725 ~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
.+|+.|+++|+++.|+|+.....+..+...+|+.
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~ 74 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIK 74 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCc
Confidence 6899999999999999999999999999999985
No 68
>PTZ00174 phosphomannomutase; Provisional
Probab=97.98 E-value=1.7e-05 Score=84.08 Aligned_cols=49 Identities=27% Similarity=0.360 Sum_probs=39.6
Q ss_pred EEeCCc--hhHHHHHHHHhhcCCCEEEEEcC----ChhcHHHHHhC-CccEEecCcc
Q 002671 841 CCRVSP--KQKALVTRLVKEGTGKTTLAIGD----GANDVGMIQEA-DIGIGISGVE 890 (894)
Q Consensus 841 ~~r~~P--~qK~~iv~~lk~~~~~~v~~iGD----G~ND~~ml~~A-dvGI~i~g~e 890 (894)
+..+.| -.|+..++.|.+. ...|++||| |.||.+||+.| -.|+++++++
T Consensus 179 ~leI~~~gvsKg~al~~L~~~-~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~ 234 (247)
T PTZ00174 179 SFDVFPKGWDKTYCLRHLEND-FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPE 234 (247)
T ss_pred EEEeeeCCCcHHHHHHHHHhh-hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHH
Confidence 446666 4599999999874 678999999 99999999977 6777776654
No 69
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.98 E-value=3.3e-05 Score=81.37 Aligned_cols=41 Identities=7% Similarity=0.001 Sum_probs=37.2
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
..-+.+.++|++|+++||.|+++||+.......+..++++-
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 45567899999999999999999999999999999999974
No 70
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.98 E-value=3.7e-05 Score=78.95 Aligned_cols=167 Identities=19% Similarity=0.235 Sum_probs=85.3
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcc--ccccCceEEEEecCC-----chhhHHHHHHHHHHhHHHH
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACS--LLRQGMKQICITALN-----SDSVGKAAKEAVKDNILMQ 790 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~g--l~~~~~~~~~i~~~~-----~~~~~~~~~~~~~~~~~~~ 790 (894)
++-+.+.++|++|++.|++++++||+....+..+...++ ++..+...+...+.. .+......... ..+...
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 94 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIEPSDVFEEILGIK--EEIGAE 94 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEcccccHHHHHHhh--hhcCce
Confidence 466888999999999999999999999999999887643 333333333221111 11111111100 011000
Q ss_pred HHhhhhhhhcc--CCCCCceEEEEeCchhhhhcchHHHHHHHHHhh---cc----CeEEEEeCCc--hhHHHHHHHHhhc
Q 002671 791 ITNASQMIKLE--RDPHAAYALIIEGKTLAYALEDDMKHHFLGLAV---EC----ASVICCRVSP--KQKALVTRLVKEG 859 (894)
Q Consensus 791 ~~~~~~~~~~~--~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~---~~----~~vv~~r~~P--~qK~~iv~~lk~~ 859 (894)
+.......... ............+..........+......... .+ ...-+..+.| ..|...++.+.+.
T Consensus 95 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~ 174 (204)
T TIGR01484 95 LKSLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKE 174 (204)
T ss_pred eeeeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHHHH
Confidence 00000000000 001111111111110000111122222222110 01 1112334556 5699999988764
Q ss_pred CC---CEEEEEcCChhcHHHHHhCCccEEe
Q 002671 860 TG---KTTLAIGDGANDVGMIQEADIGIGI 886 (894)
Q Consensus 860 ~~---~~v~~iGDG~ND~~ml~~AdvGI~i 886 (894)
.+ ..++++||+.||.+|++.|++||+|
T Consensus 175 ~~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 175 LNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred hCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 43 4699999999999999999999997
No 71
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=97.90 E-value=5.5e-05 Score=77.52 Aligned_cols=112 Identities=12% Similarity=0.014 Sum_probs=77.9
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhh
Q 002671 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNAS 795 (894)
Q Consensus 716 eD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (894)
..++++++.+.|+.+++.|++++++||-....+..+++.+|+..--...+......
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g------------------------ 140 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDG------------------------ 140 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCC------------------------
Confidence 45688999999999999999999999999999999999999842100001000000
Q ss_pred hhhhccCCCCCceEEEEeCchhhhhcchHHHHHHHHHhhccCeEEEEeCCchhHHHHHHHHhhcCC---CEEEEEcCChh
Q 002671 796 QMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTG---KTTLAIGDGAN 872 (894)
Q Consensus 796 ~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~~P~qK~~iv~~lk~~~~---~~v~~iGDG~N 872 (894)
..+|+... -.+.++.|...++.+.+..+ ..++++||+.+
T Consensus 141 ---------------~~~g~~~~-----------------------~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~ 182 (202)
T TIGR01490 141 ---------------IYTGNIDG-----------------------NNCKGEGKVHALAELLAEEQIDLKDSYAYGDSIS 182 (202)
T ss_pred ---------------EEeCCccC-----------------------CCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcc
Confidence 11221110 11345778877766543233 36899999999
Q ss_pred cHHHHHhCCccEEecCc
Q 002671 873 DVGMIQEADIGIGISGV 889 (894)
Q Consensus 873 D~~ml~~AdvGI~i~g~ 889 (894)
|.+|++.|+.++.+...
T Consensus 183 D~~~~~~a~~~~~v~~~ 199 (202)
T TIGR01490 183 DLPLLSLVGHPYVVNPD 199 (202)
T ss_pred cHHHHHhCCCcEEeCCC
Confidence 99999999999998654
No 72
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=97.87 E-value=6.1e-05 Score=75.33 Aligned_cols=40 Identities=15% Similarity=0.148 Sum_probs=37.5
Q ss_pred ccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 719 lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
+++++.+.++.|++.|++++++||.....+..++...|+.
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID 113 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc
Confidence 5799999999999999999999999999999999998874
No 73
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=97.86 E-value=4.6e-05 Score=76.71 Aligned_cols=34 Identities=18% Similarity=0.199 Sum_probs=31.8
Q ss_pred HHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 725 QCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 725 ~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
.+|+.|+++|+++.++||+....+..+++++|+.
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~ 88 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGIT 88 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCc
Confidence 6999999999999999999999999999999874
No 74
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.85 E-value=5.8e-05 Score=76.27 Aligned_cols=114 Identities=15% Similarity=0.161 Sum_probs=74.8
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhhh
Q 002671 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (894)
Q Consensus 717 D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (894)
-++.+++.+.++.|++.|+++.++|+.....+..+....|+...-..++ -+..
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~-~~~~-------------------------- 123 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIY-SNPA-------------------------- 123 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEe-ccCc--------------------------
Confidence 4788999999999999999999999999999999988888743211111 1100
Q ss_pred hhhccCCCCCceEEEEeCchhhhhcchHHHHHHHHHhhccCeEEEEe-CCchhHHHHHHHHhhcC-CCEEEEEcCChhcH
Q 002671 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCR-VSPKQKALVTRLVKEGT-GKTTLAIGDGANDV 874 (894)
Q Consensus 797 ~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r-~~P~qK~~iv~~lk~~~-~~~v~~iGDG~ND~ 874 (894)
+.+++-.... + -..| ..|.. .....|..+++.+++ . ...+++||||.||+
T Consensus 124 --------------~~~~~g~~~~--------~---~~~~--~~~~~~~~g~~K~~~~~~~~~-~~~~~~i~iGD~~~D~ 175 (188)
T TIGR01489 124 --------------SFDNDGRHIV--------W---PHHC--HGCCSCPCGCCKGKVIHKLSE-PKYQHIIYIGDGVTDV 175 (188)
T ss_pred --------------eECCCCcEEE--------e---cCCC--CccCcCCCCCCHHHHHHHHHh-hcCceEEEECCCcchh
Confidence 0000000000 0 0000 01111 122358889998876 4 67899999999999
Q ss_pred HHHHhCCccEE
Q 002671 875 GMIQEADIGIG 885 (894)
Q Consensus 875 ~ml~~AdvGI~ 885 (894)
.|.+.||+-.|
T Consensus 176 ~aa~~~d~~~a 186 (188)
T TIGR01489 176 CPAKLSDVVFA 186 (188)
T ss_pred chHhcCCcccc
Confidence 99999987554
No 75
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.83 E-value=0.00016 Score=77.38 Aligned_cols=168 Identities=11% Similarity=0.078 Sum_probs=86.2
Q ss_pred cccCChHHHHHHHHH-cCCeEEEEcCCcHHHHHHHHHhccc--cccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhh
Q 002671 718 KLQKGVPQCIDKLAQ-AGLKIWVLTGDKMETAINIGFACSL--LRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNA 794 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~-aGIkv~~lTGD~~~ta~~ia~~~gl--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (894)
.+-+++.++|+.|++ .|++++++||+....+..+....++ +..+.-.+. +... +.............+...+...
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~-~~~~-~~~~~~l~~~~~~~i~~~l~~~ 113 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERR-DING-KTHIVHLPDAIARDISVQLHTA 113 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeee-cCCC-CeeeccCChhHHHHHHHHHHHH
Confidence 345788899999998 7999999999999999888776653 222211111 1100 0000000000001111111111
Q ss_pred hhhhhccCCCCCceEEEEeCchhhhhcchHHHHHHH-HHhhccC------eEEEEeCCch--hHHHHHHHHhhcCC---C
Q 002671 795 SQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFL-GLAVECA------SVICCRVSPK--QKALVTRLVKEGTG---K 862 (894)
Q Consensus 795 ~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~-~~~~~~~------~vv~~r~~P~--qK~~iv~~lk~~~~---~ 862 (894)
........-.....+++........ ..+....+. .+...+. .--+..+.|. .|+..++.+.+..+ .
T Consensus 114 ~~~~pg~~ve~k~~~~~~h~r~~~~--~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~ 191 (266)
T PRK10187 114 LAQLPGAELEAKGMAFALHYRQAPQ--HEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGR 191 (266)
T ss_pred hccCCCcEEEeCCcEEEEECCCCCc--cHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCC
Confidence 1000000001122333333322210 112222222 2222221 1133455554 79988888765433 6
Q ss_pred EEEEEcCChhcHHHHHhC----CccEEecCc
Q 002671 863 TTLAIGDGANDVGMIQEA----DIGIGISGV 889 (894)
Q Consensus 863 ~v~~iGDG~ND~~ml~~A----dvGI~i~g~ 889 (894)
.++++||+.||.+|++.+ ++||+|+.+
T Consensus 192 ~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a 222 (266)
T PRK10187 192 TPVFVGDDLTDEAGFAVVNRLGGISVKVGTG 222 (266)
T ss_pred eEEEEcCCccHHHHHHHHHhcCCeEEEECCC
Confidence 799999999999999999 999999543
No 76
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.80 E-value=7.8e-05 Score=70.42 Aligned_cols=44 Identities=20% Similarity=0.254 Sum_probs=40.3
Q ss_pred ecccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 715 VEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 715 ieD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
-..++.+++++++++|++.|++++++||.....+......+|+.
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~ 64 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLD 64 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCc
Confidence 34588999999999999999999999999999999999998874
No 77
>PLN02382 probable sucrose-phosphatase
Probab=97.80 E-value=0.00026 Score=80.40 Aligned_cols=164 Identities=14% Similarity=0.131 Sum_probs=87.9
Q ss_pred HHHH-HHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceE------EEEecCC-chhh-HHHHHHHHHHh-HHHHHHh
Q 002671 724 PQCI-DKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQ------ICITALN-SDSV-GKAAKEAVKDN-ILMQITN 793 (894)
Q Consensus 724 ~~~I-~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~------~~i~~~~-~~~~-~~~~~~~~~~~-~~~~~~~ 793 (894)
..++ +++++.|+..+++||+.+..+..+.++.++..++.-+ +.....- .+.. ...+...-... +...+..
T Consensus 34 ~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~~~ 113 (413)
T PLN02382 34 FNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEETSK 113 (413)
T ss_pred HHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHHhc
Confidence 3445 8889999999999999999999999999988775211 2221111 1110 00111000000 1011100
Q ss_pred hhhhhhc-c--CCCCCceEEEEeCchhhhhcchHHHHHHHHHhhccCe----EEEEeCCchh--HHHHHHHHhhcC---C
Q 002671 794 ASQMIKL-E--RDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECAS----VICCRVSPKQ--KALVTRLVKEGT---G 861 (894)
Q Consensus 794 ~~~~~~~-~--~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~----vv~~r~~P~q--K~~iv~~lk~~~---~ 861 (894)
...... . .....+..+..+.+.+..+ ...+.+.+......++. -.+..+.|.. |+..++.|.++. |
T Consensus 114 -~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~-~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~g 191 (413)
T PLN02382 114 -FPELKLQPETEQRPHKVSFYVDKKKAQEV-IKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEG 191 (413)
T ss_pred -CCCcccCCcccCCCeEEEEEechHHhHHH-HHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcC
Confidence 000000 0 1112233333332222211 12233333221111211 1355677755 999999987654 3
Q ss_pred ---CEEEEEcCChhcHHHHHhCC-ccEEecCc
Q 002671 862 ---KTTLAIGDGANDVGMIQEAD-IGIGISGV 889 (894)
Q Consensus 862 ---~~v~~iGDG~ND~~ml~~Ad-vGI~i~g~ 889 (894)
..|+++||+.||++||+.|+ .||+|++.
T Consensus 192 i~~~~~iafGDs~NDleMl~~ag~~gvam~NA 223 (413)
T PLN02382 192 KAPVNTLVCGDSGNDAELFSVPDVYGVMVSNA 223 (413)
T ss_pred CChhcEEEEeCCHHHHHHHhcCCCCEEEEcCC
Confidence 47899999999999999999 69999764
No 78
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.79 E-value=0.00015 Score=75.33 Aligned_cols=110 Identities=14% Similarity=0.218 Sum_probs=71.8
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhhhh
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (894)
++++|+.++++.|++.|+++.|+||-....+..+.... +.. ...+....
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~--~~i~~n~~---------------------------- 122 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK--EQIYCNGS---------------------------- 122 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc--CcEEEeEE----------------------------
Confidence 67999999999999999999999999998888888887 532 11111110
Q ss_pred hhccCCCCCceEEEEeCchhhhhcchHHHHHHHHHhhccCeEEEE-eCCchhHHHHHHHHhhcCCCEEEEEcCChhcHHH
Q 002671 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICC-RVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGM 876 (894)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~-r~~P~qK~~iv~~lk~~~~~~v~~iGDG~ND~~m 876 (894)
..+|+.+..... + .....+ .....-|..+++.++. ....+++||||.||+.|
T Consensus 123 -------------~~~~~~~~~~kp-~------------p~~~~~~~~~~~~K~~~l~~~~~-~~~~~i~iGDs~~Di~a 175 (219)
T PRK09552 123 -------------DFSGEYITITWP-H------------PCDEHCQNHCGCCKPSLIRKLSD-TNDFHIVIGDSITDLEA 175 (219)
T ss_pred -------------EecCCeeEEecc-C------------CccccccccCCCchHHHHHHhcc-CCCCEEEEeCCHHHHHH
Confidence 111111110000 0 000000 0011247788888875 55679999999999999
Q ss_pred HHhCCccEE
Q 002671 877 IQEADIGIG 885 (894)
Q Consensus 877 l~~AdvGI~ 885 (894)
.+.||+.++
T Consensus 176 a~~Ag~~~a 184 (219)
T PRK09552 176 AKQADKVFA 184 (219)
T ss_pred HHHCCccee
Confidence 999999776
No 79
>PLN02954 phosphoserine phosphatase
Probab=97.71 E-value=0.00017 Score=75.30 Aligned_cols=41 Identities=17% Similarity=0.420 Sum_probs=38.5
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
++.++++++++.|++.|+++.|+||.....+..++..+|+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~ 124 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIP 124 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCC
Confidence 47799999999999999999999999999999999999985
No 80
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.40 E-value=0.0016 Score=80.04 Aligned_cols=170 Identities=15% Similarity=0.074 Sum_probs=85.8
Q ss_pred ccCChHHHHHHHHH-cCCeEEEEcCCcHHHHHHHHHhcc--ccccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhh
Q 002671 719 LQKGVPQCIDKLAQ-AGLKIWVLTGDKMETAINIGFACS--LLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNAS 795 (894)
Q Consensus 719 lr~~v~~~I~~L~~-aGIkv~~lTGD~~~ta~~ia~~~g--l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (894)
+-+++.++|+.|.+ .|+.|+++||+............+ ++..+...+...+..-..... ....-++.+...+....
T Consensus 515 ~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~-~~~~w~~~v~~il~~~~ 593 (726)
T PRK14501 515 PDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEP-VATEWKDAVRPILEEFV 593 (726)
T ss_pred CCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCC-cchhHHHHHHHHHHHHH
Confidence 45678899999999 699999999999998887665444 333333322211111000000 00000111111111111
Q ss_pred hhhhccCCCCCceEEEEeCc----hhhhhcchHHHHHHHHHhhccCeE-----EEEeCCc--hhHHHHHHHHhhc-CCCE
Q 002671 796 QMIKLERDPHAAYALIIEGK----TLAYALEDDMKHHFLGLAVECASV-----ICCRVSP--KQKALVTRLVKEG-TGKT 863 (894)
Q Consensus 796 ~~~~~~~~~~~~~~lvi~G~----~l~~~~~~~~~~~~~~~~~~~~~v-----v~~r~~P--~qK~~iv~~lk~~-~~~~ 863 (894)
...........+..++..-. .+......++..++.......... -+..+.| -.|+..++.+.+. ....
T Consensus 594 ~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~ 673 (726)
T PRK14501 594 DRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDF 673 (726)
T ss_pred hcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCE
Confidence 10000000111233333211 111111123334443332221111 2234556 4699999988763 2358
Q ss_pred EEEEcCChhcHHHHHhC---CccEEecCc
Q 002671 864 TLAIGDGANDVGMIQEA---DIGIGISGV 889 (894)
Q Consensus 864 v~~iGDG~ND~~ml~~A---dvGI~i~g~ 889 (894)
++++||+.||.+|++.+ ..||+|+.+
T Consensus 674 vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~ 702 (726)
T PRK14501 674 VLAIGDDTTDEDMFRALPETAITVKVGPG 702 (726)
T ss_pred EEEECCCCChHHHHHhcccCceEEEECCC
Confidence 99999999999999997 577888543
No 81
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.14 E-value=0.0022 Score=66.82 Aligned_cols=42 Identities=21% Similarity=0.233 Sum_probs=38.4
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 717 D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
-++.+|+.++++.|++.|+++.|+||.....+..+....|+.
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 133 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIA 133 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCc
Confidence 467899999999999999999999999999998998888874
No 82
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.10 E-value=0.0039 Score=64.23 Aligned_cols=110 Identities=15% Similarity=0.088 Sum_probs=76.1
Q ss_pred cccCChHHHHH-HHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhhh
Q 002671 718 KLQKGVPQCID-KLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (894)
Q Consensus 718 ~lr~~v~~~I~-~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (894)
.+.+++.++|+ .+++.|++++|+|+-....+..+|+..++.... +.+...-.
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~-~~i~t~le-------------------------- 146 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL-NLIASQIE-------------------------- 146 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC-cEEEEEeE--------------------------
Confidence 56899999996 789899999999999999999999886664421 23322211
Q ss_pred hhhccCCCCCceEEEEeCchhhhhcchHHHHHHHHHhhccCeEEEEeCCchhHHHHHHHHhhcCCCEEEEEcCChhcHHH
Q 002671 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGM 876 (894)
Q Consensus 797 ~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~~P~qK~~iv~~lk~~~~~~v~~iGDG~ND~~m 876 (894)
+.+|.. +.--.+..++|..-++..-........+-||+.||.||
T Consensus 147 --------------~~~gg~----------------------~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pm 190 (210)
T TIGR01545 147 --------------RGNGGW----------------------VLPLRCLGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPL 190 (210)
T ss_pred --------------EeCCce----------------------EcCccCCChHHHHHHHHHhCCChhheEEecCCcccHHH
Confidence 011100 01123556788776664422133456799999999999
Q ss_pred HHhCCccEEecCcc
Q 002671 877 IQEADIGIGISGVE 890 (894)
Q Consensus 877 l~~AdvGI~i~g~e 890 (894)
|+.||-.+++...+
T Consensus 191 L~~a~~~~~Vnp~~ 204 (210)
T TIGR01545 191 LAFCEHRWRVSKRG 204 (210)
T ss_pred HHhCCCcEEECcch
Confidence 99999999996554
No 83
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.07 E-value=0.0028 Score=65.86 Aligned_cols=44 Identities=25% Similarity=0.238 Sum_probs=40.6
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002671 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (894)
Q Consensus 716 eD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~ 759 (894)
...+-+++++++..|+++|++..++|++....+..+.+..|+..
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~ 130 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLAD 130 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcc
Confidence 55677999999999999999999999999999999999999864
No 84
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=97.01 E-value=0.0013 Score=61.93 Aligned_cols=34 Identities=18% Similarity=0.238 Sum_probs=31.8
Q ss_pred HHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 725 QCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 725 ~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
..|+.|.++||++.++||++...+..=|+.+||-
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~ 75 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIK 75 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCc
Confidence 5899999999999999999999999999999983
No 85
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=96.98 E-value=0.0024 Score=65.84 Aligned_cols=41 Identities=20% Similarity=0.189 Sum_probs=37.7
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
++.+|+.++++.|+++|+++.++|+-....+..+.+..|+.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 125 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLA 125 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcH
Confidence 57899999999999999999999999999899988888874
No 86
>PRK11590 hypothetical protein; Provisional
Probab=96.96 E-value=0.0062 Score=62.89 Aligned_cols=111 Identities=12% Similarity=0.066 Sum_probs=77.2
Q ss_pred cccCChHHHH-HHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhhh
Q 002671 718 KLQKGVPQCI-DKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (894)
Q Consensus 718 ~lr~~v~~~I-~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (894)
.+.+++.++| +.|++.|++++|+|+-....+..++..+|+.. ..+.+...-.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~-------------------------- 147 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQ-------------------------- 147 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEE--------------------------
Confidence 4579999999 67889999999999999999999999988632 2233322210
Q ss_pred hhhccCCCCCceEEEEeCchhhhhcchHHHHHHHHHhhccCeEEEEeCCchhHHHHHHHHhhcCCCEEEEEcCChhcHHH
Q 002671 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGM 876 (894)
Q Consensus 797 ~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~~P~qK~~iv~~lk~~~~~~v~~iGDG~ND~~m 876 (894)
...+|.- ....+..+.|..-++..-........+-||..||.||
T Consensus 148 -------------~~~tg~~-----------------------~g~~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pm 191 (211)
T PRK11590 148 -------------RRYGGWV-----------------------LTLRCLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPL 191 (211)
T ss_pred -------------EEEccEE-----------------------CCccCCChHHHHHHHHHhCCCcceEEEecCCcccHHH
Confidence 0112211 1122566788776664421134556799999999999
Q ss_pred HHhCCccEEecCccc
Q 002671 877 IQEADIGIGISGVEG 891 (894)
Q Consensus 877 l~~AdvGI~i~g~eg 891 (894)
|+.|+-.+++.....
T Consensus 192 L~~a~~~~~vnp~~~ 206 (211)
T PRK11590 192 LYFCQHRWRVTPRGE 206 (211)
T ss_pred HHhCCCCEEECccHH
Confidence 999999999866543
No 87
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=96.92 E-value=0.0036 Score=64.23 Aligned_cols=41 Identities=27% Similarity=0.322 Sum_probs=37.3
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
++.+|+.++++.|+++|+++.++||.....+..+....|+.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~ 115 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLL 115 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCCh
Confidence 67899999999999999999999999888888888888874
No 88
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=96.92 E-value=0.0057 Score=64.86 Aligned_cols=44 Identities=14% Similarity=0.242 Sum_probs=40.2
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccC
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQG 761 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~ 761 (894)
++++|+++.++.|++.|+++.++||=....+..+..+.|+..+.
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~ 164 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPN 164 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcC
Confidence 56899999999999999999999999999999999999986554
No 89
>PLN02423 phosphomannomutase
Probab=96.91 E-value=0.0038 Score=65.98 Aligned_cols=49 Identities=22% Similarity=0.383 Sum_probs=39.9
Q ss_pred EEEeCCch--hHHHHHHHHhhcCCCEEEEEcC----ChhcHHHHHh-CCccEEecCcc
Q 002671 840 ICCRVSPK--QKALVTRLVKEGTGKTTLAIGD----GANDVGMIQE-ADIGIGISGVE 890 (894)
Q Consensus 840 v~~r~~P~--qK~~iv~~lk~~~~~~v~~iGD----G~ND~~ml~~-AdvGI~i~g~e 890 (894)
.+..+.|. .|+..++.|+ ....|+++|| |.||.+||+. --.|+.++|-+
T Consensus 179 ~~iDi~~~gvnKg~al~~L~--~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~ 234 (245)
T PLN02423 179 ISFDVFPQGWDKTYCLQFLE--DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPD 234 (245)
T ss_pred EEEEEeeCCCCHHHHHHHhc--CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHH
Confidence 35566664 4999999999 5678999999 9999999997 77788887643
No 90
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=96.89 E-value=0.0037 Score=66.10 Aligned_cols=159 Identities=15% Similarity=0.214 Sum_probs=80.7
Q ss_pred HHHcCCeEEEEcCCcHHHHHHHHHhccccccCc------eEEEEecCCc--hhh-HHHHHHHH-HHhHHHHHHhhhhhhh
Q 002671 730 LAQAGLKIWVLTGDKMETAINIGFACSLLRQGM------KQICITALNS--DSV-GKAAKEAV-KDNILMQITNASQMIK 799 (894)
Q Consensus 730 L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~------~~~~i~~~~~--~~~-~~~~~~~~-~~~~~~~~~~~~~~~~ 799 (894)
..+.++..+++||++.+.+..+..+.++..|+. ..+.. +... +.. ...+...- .+.+...+........
T Consensus 31 ~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~-~~~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~l~~ 109 (247)
T PF05116_consen 31 QARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYY-GENWQPDEEWQAHIDERWDRERVEEILAELPGLRP 109 (247)
T ss_dssp HHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEE-SSTTEE-HHHHHHHHTT--HHHHHHHHHCHCCEEE
T ss_pred hhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEE-cCCCcChHHHHHHHHhcCChHHHHHHHHHhhCccc
Confidence 446789999999999999999999999866531 12222 1111 110 11111100 1111111111111111
Q ss_pred ccCC--CCCceEEEEeCchhhhhcchHHHHHHHHHhhccCeE----EEEeCCc--hhHHHHHHHHhhcCC---CEEEEEc
Q 002671 800 LERD--PHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASV----ICCRVSP--KQKALVTRLVKEGTG---KTTLAIG 868 (894)
Q Consensus 800 ~~~~--~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~v----v~~r~~P--~qK~~iv~~lk~~~~---~~v~~iG 868 (894)
.... ...+.+..++.......+ +++...+......|+.+ -+..+.| ..|...|+.+++..+ ..|+++|
T Consensus 110 q~~~~q~~~k~sy~~~~~~~~~~~-~~i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~aG 188 (247)
T PF05116_consen 110 QPESEQRPFKISYYVDPDDSADIL-EEIRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQVLVAG 188 (247)
T ss_dssp GGCCCGCCTCECEEEETTSHCHHH-HHHHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGGEEEEE
T ss_pred CCccccCCeeEEEEEecccchhHH-HHHHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHHEEEEe
Confidence 1111 122344444544433222 23333333322333221 2344555 459999999987633 4688999
Q ss_pred CChhcHHHHHhCCccEEecCcc
Q 002671 869 DGANDVGMIQEADIGIGISGVE 890 (894)
Q Consensus 869 DG~ND~~ml~~AdvGI~i~g~e 890 (894)
|+.||.+||..++-||.+++.+
T Consensus 189 DSgND~~mL~~~~~~vvV~Na~ 210 (247)
T PF05116_consen 189 DSGNDLEMLEGGDHGVVVGNAQ 210 (247)
T ss_dssp SSGGGHHHHCCSSEEEE-TTS-
T ss_pred CCCCcHHHHcCcCCEEEEcCCC
Confidence 9999999999999999887653
No 91
>PRK08238 hypothetical protein; Validated
Probab=96.87 E-value=0.005 Score=71.14 Aligned_cols=97 Identities=14% Similarity=0.069 Sum_probs=71.5
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCCchhhHHHHHHHHHHhHHHHHHhhhhh
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQM 797 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (894)
++++++.+.|++++++|++++++|+-....+..+++..|+.+ ..+..++
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd---~Vigsd~---------------------------- 120 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD---GVFASDG---------------------------- 120 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC---EEEeCCC----------------------------
Confidence 478999999999999999999999999999999999999732 1111110
Q ss_pred hhccCCCCCceEEEEeCchhhhhcchHHHHHHHHHhhccCeEEEEeCCchhHHHHHHHHhhcCCCEEEEEcCChhcHHHH
Q 002671 798 IKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMI 877 (894)
Q Consensus 798 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~~P~qK~~iv~~lk~~~~~~v~~iGDG~ND~~ml 877 (894)
..+..|+.|...+...-. ...+.++||..+|.+|+
T Consensus 121 -------------------------------------------~~~~kg~~K~~~l~~~l~--~~~~~yvGDS~~Dlp~~ 155 (479)
T PRK08238 121 -------------------------------------------TTNLKGAAKAAALVEAFG--ERGFDYAGNSAADLPVW 155 (479)
T ss_pred -------------------------------------------ccccCCchHHHHHHHHhC--ccCeeEecCCHHHHHHH
Confidence 012456667654442211 12367889999999999
Q ss_pred HhCCccEEecCcc
Q 002671 878 QEADIGIGISGVE 890 (894)
Q Consensus 878 ~~AdvGI~i~g~e 890 (894)
+.|+-.+++....
T Consensus 156 ~~A~~av~Vn~~~ 168 (479)
T PRK08238 156 AAARRAIVVGASP 168 (479)
T ss_pred HhCCCeEEECCCH
Confidence 9999999986543
No 92
>PLN02580 trehalose-phosphatase
Probab=96.63 E-value=0.049 Score=60.62 Aligned_cols=48 Identities=25% Similarity=0.329 Sum_probs=36.7
Q ss_pred EEeCCch---hHHHHHHHHhhcCC---C---EEEEEcCChhcHHHHHh-----CCccEEecC
Q 002671 841 CCRVSPK---QKALVTRLVKEGTG---K---TTLAIGDGANDVGMIQE-----ADIGIGISG 888 (894)
Q Consensus 841 ~~r~~P~---qK~~iv~~lk~~~~---~---~v~~iGDG~ND~~ml~~-----AdvGI~i~g 888 (894)
+.++.|. +|...|+.+.+..+ . .+++|||+.||..|++. +++||+|+.
T Consensus 291 vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn 352 (384)
T PLN02580 291 VLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSS 352 (384)
T ss_pred EEEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEec
Confidence 3456664 89999998876443 1 25899999999999996 588998863
No 93
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=96.57 E-value=0.0014 Score=53.40 Aligned_cols=46 Identities=24% Similarity=0.215 Sum_probs=38.2
Q ss_pred cccCCCCCCCCeeecCCcchhhhhHHHHHHHhhhHHHHHHHHHHHHhcc
Q 002671 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVT 95 (894)
Q Consensus 47 ~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~il~~~ 95 (894)
...++.+||+|.+..++...+. +.+++||.+++.++++++++++++
T Consensus 16 v~~r~~~~G~N~l~~~~~~s~~---~~~l~~~~~p~~~iL~~~a~is~~ 61 (64)
T smart00831 16 AARRLERYGPNELPPPKKRSPL---LRFLRQFHNPLIYILLAAAVLSAL 61 (64)
T ss_pred HHHHHHHhCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHH
Confidence 3457789999999988744332 889999999999999999999876
No 94
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=96.51 E-value=0.0081 Score=62.52 Aligned_cols=43 Identities=19% Similarity=0.172 Sum_probs=38.4
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002671 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (894)
Q Consensus 717 D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~ 759 (894)
-++-+|+.++|+.|++.|+++.++||.....+..+.+..||..
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~ 133 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRD 133 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchh
Confidence 4678999999999999999999999999988888888888743
No 95
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=96.49 E-value=0.00068 Score=56.23 Aligned_cols=45 Identities=31% Similarity=0.372 Sum_probs=36.6
Q ss_pred ccccCCCCCCCCeeecCCcchhhhhHHHHHHHhhhHHHHHHHHHHHHh
Q 002671 46 MHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLS 93 (894)
Q Consensus 46 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~il~ 93 (894)
+...|+.+||+|.++..+...+. +.|+++|..|+++++++++++|
T Consensus 25 ev~~r~~~~G~N~l~~~~~~s~~---~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 25 EVEERRKKYGPNELPEPKKKSLW---RIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp HHHHHHHHHSSSSTTTTTSSSHH---HHHHHHTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccccccccccCcHH---HHHHHHHHhHHHHHHHHHHHHC
Confidence 34557789999999766554443 8999999999999999999885
No 96
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=96.47 E-value=0.012 Score=63.10 Aligned_cols=41 Identities=17% Similarity=0.169 Sum_probs=38.0
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
++.+|+.++++.|++.|+++.|+|+.....+..+...+||.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~ 182 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLR 182 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 56799999999999999999999999999999998888874
No 97
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=96.44 E-value=0.0098 Score=61.48 Aligned_cols=41 Identities=17% Similarity=0.041 Sum_probs=37.2
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
++.+|+.++++.|+++|+++.++||.....+..+....|+.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~ 122 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLD 122 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 36799999999999999999999999999888888888874
No 98
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=96.43 E-value=0.015 Score=62.60 Aligned_cols=41 Identities=12% Similarity=0.150 Sum_probs=36.4
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccc
Q 002671 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (894)
Q Consensus 717 D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl 757 (894)
.++.+++.++|+.|+++|+++.|+||-....+..+....++
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i 140 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKI 140 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCc
Confidence 46789999999999999999999999988888877777776
No 99
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=96.30 E-value=0.029 Score=59.32 Aligned_cols=46 Identities=11% Similarity=0.048 Sum_probs=35.2
Q ss_pred EeCCchhHHHHHHHHhhcCC---CEEEEEcCChhcHHHHHhC--------CccEEec
Q 002671 842 CRVSPKQKALVTRLVKEGTG---KTTLAIGDGANDVGMIQEA--------DIGIGIS 887 (894)
Q Consensus 842 ~r~~P~qK~~iv~~lk~~~~---~~v~~iGDG~ND~~ml~~A--------dvGI~i~ 887 (894)
.+-.+.+|...++.+.+..+ ..++++||+.||..|++.+ ..||.+.
T Consensus 161 ~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~ 217 (244)
T TIGR00685 161 LKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG 217 (244)
T ss_pred EeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe
Confidence 33445679988888765433 4799999999999999999 4677774
No 100
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.29 E-value=0.02 Score=58.29 Aligned_cols=43 Identities=21% Similarity=0.111 Sum_probs=38.5
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 716 eD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
.+++.++++++++.|++.|+++.|+||-....+..+...+|+.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 146 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE 146 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch
Confidence 4556678899999999999999999999999999999999875
No 101
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=96.28 E-value=0.13 Score=63.67 Aligned_cols=164 Identities=12% Similarity=0.062 Sum_probs=82.0
Q ss_pred cccCChHHHHHHH-HHcCCeEEEEcCCcHHHHHHHHHh---ccccccCceEEEEecCCc-hhhHHHHHHHHHHhHHHHHH
Q 002671 718 KLQKGVPQCIDKL-AQAGLKIWVLTGDKMETAINIGFA---CSLLRQGMKQICITALNS-DSVGKAAKEAVKDNILMQIT 792 (894)
Q Consensus 718 ~lr~~v~~~I~~L-~~aGIkv~~lTGD~~~ta~~ia~~---~gl~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~ 792 (894)
.+-+++.+++++| ++.|+.|+++||+...+....... ++++.++...+...+... +.........-++.+.....
T Consensus 616 ~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~~~~~~~w~~~v~~i~~ 695 (854)
T PLN02205 616 SPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPVADCSWKQIAEPVMQ 695 (854)
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecchhhhHHHHHHHHHHHH
Confidence 4456788999997 677999999999999998887654 345554443332221100 00000000001111100000
Q ss_pred hhhhhhhccCCCCCceEEEEeCchhh----hhcchHHHHHHHHHhhccCeE-----EEEeCCch--hHHHHHHHHhhc--
Q 002671 793 NASQMIKLERDPHAAYALIIEGKTLA----YALEDDMKHHFLGLAVECASV-----ICCRVSPK--QKALVTRLVKEG-- 859 (894)
Q Consensus 793 ~~~~~~~~~~~~~~~~~lvi~G~~l~----~~~~~~~~~~~~~~~~~~~~v-----v~~r~~P~--qK~~iv~~lk~~-- 859 (894)
..........-.....+++..-.... .....++..++.......... -+..+.|. .|...++.+.+.
T Consensus 696 ~y~ertpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~gvnKG~Al~~Ll~~~~ 775 (854)
T PLN02205 696 LYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGLVAKRLLSIMQ 775 (854)
T ss_pred HHhcCCCchhheecceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeCCCCHHHHHHHHHHHHH
Confidence 00000000111233445554432221 111224444444333222111 12344454 599999887531
Q ss_pred -CC---CEEEEEcCChhcHHHHHhCC
Q 002671 860 -TG---KTTLAIGDGANDVGMIQEAD 881 (894)
Q Consensus 860 -~~---~~v~~iGDG~ND~~ml~~Ad 881 (894)
.| ..++++||+.||..|++.++
T Consensus 776 ~~g~~~d~vl~~GDD~nDedMF~~~~ 801 (854)
T PLN02205 776 ERGMLPDFVLCIGDDRSDEDMFEVIT 801 (854)
T ss_pred hcCCCcccEEEEcCCccHHHHHHHhh
Confidence 23 37999999999999999886
No 102
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.28 E-value=0.011 Score=61.61 Aligned_cols=40 Identities=18% Similarity=0.167 Sum_probs=34.9
Q ss_pred ccCChHHHHHHHHHcCCeEEEEcCC----cHHHHHHHHHhcccc
Q 002671 719 LQKGVPQCIDKLAQAGLKIWVLTGD----KMETAINIGFACSLL 758 (894)
Q Consensus 719 lr~~v~~~I~~L~~aGIkv~~lTGD----~~~ta~~ia~~~gl~ 758 (894)
+.+++++.++.|+++|+++.++|+. ...++..+.+..|+.
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 3445999999999999999999998 667899999889984
No 103
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.18 E-value=0.017 Score=60.22 Aligned_cols=40 Identities=18% Similarity=0.186 Sum_probs=34.7
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCc----HHHHHHHHHhccc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDK----METAINIGFACSL 757 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~----~~ta~~ia~~~gl 757 (894)
.+.+++.+.|+.|++.|+++.++||+. ..|+.++.+..|+
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gi 157 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHI 157 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCC
Confidence 466889999999999999999999975 4588888887887
No 104
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=96.10 E-value=0.023 Score=59.45 Aligned_cols=41 Identities=22% Similarity=0.073 Sum_probs=36.0
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
++.+|+.++++.|++.|+++.++|+.....+..+-...|+.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~ 135 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWE 135 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCch
Confidence 56799999999999999999999999888887777777764
No 105
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=96.03 E-value=0.038 Score=56.27 Aligned_cols=41 Identities=15% Similarity=0.181 Sum_probs=36.5
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
++.+++.++++.|++.|++++++|+-+...+..+...+||.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~ 132 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLD 132 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCCh
Confidence 46799999999999999999999998888888888888864
No 106
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=95.99 E-value=0.047 Score=53.34 Aligned_cols=34 Identities=26% Similarity=0.324 Sum_probs=31.4
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEcCCcHHHHH
Q 002671 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAI 749 (894)
Q Consensus 716 eD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~ 749 (894)
+|.+.+++.++++.++++|++++++||+....+.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~ 58 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQAD 58 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHH
Confidence 5788999999999999999999999999988774
No 107
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=95.90 E-value=0.032 Score=52.71 Aligned_cols=41 Identities=20% Similarity=0.234 Sum_probs=34.9
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEcCCc--------HHHHHHHHHhccc
Q 002671 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDK--------METAINIGFACSL 757 (894)
Q Consensus 717 D~lr~~v~~~I~~L~~aGIkv~~lTGD~--------~~ta~~ia~~~gl 757 (894)
-++.+++.++++.|+++|++++++|+.. ...+..+...+++
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 3667999999999999999999999988 6666777777776
No 108
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=95.73 E-value=0.054 Score=56.45 Aligned_cols=41 Identities=15% Similarity=0.058 Sum_probs=35.4
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
++.+|+.++++.|+++|+++.++|+-....+...-...|+.
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 133 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD 133 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH
Confidence 56799999999999999999999998888777766667764
No 109
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=95.59 E-value=0.052 Score=57.67 Aligned_cols=42 Identities=26% Similarity=0.182 Sum_probs=37.1
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~ 759 (894)
++-+|+.++++.|+++|+++.++||.....+..+-+..|+..
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~ 140 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQG 140 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcC
Confidence 356999999999999999999999999998888888887753
No 110
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=95.54 E-value=0.035 Score=60.66 Aligned_cols=44 Identities=20% Similarity=0.086 Sum_probs=40.6
Q ss_pred ecccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 715 VEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 715 ieD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
..+++.+++.++|+.|++.|++++++||....++..+...+++.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~ 227 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQT 227 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHc
Confidence 56789999999999999999999999999999999998888874
No 111
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=95.52 E-value=0.066 Score=57.41 Aligned_cols=41 Identities=24% Similarity=0.128 Sum_probs=35.2
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
++-+|+.++|+.|++.|+++.|+||.....+..+-...++.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~ 141 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQ 141 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhc
Confidence 45699999999999999999999999888877776666654
No 112
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=95.45 E-value=0.057 Score=55.95 Aligned_cols=42 Identities=19% Similarity=0.163 Sum_probs=38.5
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 717 D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
.++.+|+++.++.|++.|+++.++||-....+..+....|+.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 127 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWT 127 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhh
Confidence 478899999999999999999999999999999888888875
No 113
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=95.44 E-value=0.066 Score=52.68 Aligned_cols=44 Identities=14% Similarity=0.168 Sum_probs=39.9
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002671 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (894)
Q Consensus 716 eD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~ 759 (894)
..++.+++.++++.|++.|++++++|+-....+.......|+..
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~ 118 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDD 118 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGG
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCccccccccccccccc
Confidence 45778999999999999999999999999999999999998863
No 114
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=95.20 E-value=0.068 Score=51.84 Aligned_cols=38 Identities=18% Similarity=0.296 Sum_probs=33.3
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcCChhcHHHHHhCCccEE
Q 002671 847 KQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIG 885 (894)
Q Consensus 847 ~qK~~iv~~lk~~~~~~v~~iGDG~ND~~ml~~AdvGI~ 885 (894)
.+|..+|+.+++ +...+.+||||+-|+++-+.+|+=.|
T Consensus 146 ~dK~~vI~~l~e-~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 146 HDKSSVIHELSE-PNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred CCcchhHHHhhc-CCceEEEecCCcccccHhhhhhhHhh
Confidence 569999999998 77889999999999999998887543
No 115
>PLN03017 trehalose-phosphatase
Probab=95.20 E-value=0.62 Score=51.56 Aligned_cols=207 Identities=13% Similarity=0.147 Sum_probs=101.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhCHHHHHHHHHH-----hhhcccEEEEeeeecc--cccCChHHHHHHHHHcCCeEEEEcCC
Q 002671 671 ESEYSAWNSEFQKAKSSIGADREATLEHVSD-----MMEKDLILVGATAVED--KLQKGVPQCIDKLAQAGLKIWVLTGD 743 (894)
Q Consensus 671 ~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~-----~iE~dl~llG~~~ieD--~lr~~v~~~I~~L~~aGIkv~~lTGD 743 (894)
..+|..|..++-.|...+ ++.+..... .+.-|.+|+-++.-.| .+-+++.++|++|. .|++++++||+
T Consensus 83 ~~~~~~w~~~~psal~~~----~~~~~~~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR 157 (366)
T PLN03017 83 QQQLNSWIMQHPSALEMF----EQIMEASRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGR 157 (366)
T ss_pred hhhhhHHHhhCChHHHHH----HHHHHHhcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCC
Confidence 467888988887776544 111111110 0112333332222233 36678889999999 78999999999
Q ss_pred cHHHHHHHHHhccccccCceEEEEecCCch-----hhH---------HHH---HHHHHHhHHHHHHhhhhhhhccCCCCC
Q 002671 744 KMETAINIGFACSLLRQGMKQICITALNSD-----SVG---------KAA---KEAVKDNILMQITNASQMIKLERDPHA 806 (894)
Q Consensus 744 ~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~-----~~~---------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 (894)
......... ++ .+...+..++.... ... .+. .......+...+...........-+.+
T Consensus 158 ~~~~l~~~~---~l--~~l~l~g~hGa~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K 232 (366)
T PLN03017 158 CIDKVYNFV---KL--AELYYAGSHGMDIKGPAKGFSRHKRVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENH 232 (366)
T ss_pred CHHHHHHhh---cc--cCceEEEcCCcEEecCCCcceeccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEec
Confidence 999888773 22 11222222222100 000 000 000001111111111111111111334
Q ss_pred ceEEEEeCchhhhhcchHHHHHHHHHhhccC------eEEEEeCCc---hhHHHHHHHHhhcCC------CEEEEEcCCh
Q 002671 807 AYALIIEGKTLAYALEDDMKHHFLGLAVECA------SVICCRVSP---KQKALVTRLVKEGTG------KTTLAIGDGA 871 (894)
Q Consensus 807 ~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~------~vv~~r~~P---~qK~~iv~~lk~~~~------~~v~~iGDG~ 871 (894)
.+++.+.-.........++..++...+.... .--..++.| -+|...++.+.+..+ ..++++||-.
T Consensus 233 ~~~vavHyR~ad~~~~~~l~~~~~~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~ 312 (366)
T PLN03017 233 KFCASVHFRCVDEKKWSELVLQVRSVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDR 312 (366)
T ss_pred CcEEEEEcCcCCHHHHHHHHHHHHHHHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCC
Confidence 4555554433222111233344443332221 112334445 389999998875332 3689999999
Q ss_pred hcHHHHHhC-----CccEEec
Q 002671 872 NDVGMIQEA-----DIGIGIS 887 (894)
Q Consensus 872 ND~~ml~~A-----dvGI~i~ 887 (894)
.|-.|++.. ++||-++
T Consensus 313 TDEDaF~~L~~~~~G~gI~VG 333 (366)
T PLN03017 313 TDEDAFKMLRDRGEGFGILVS 333 (366)
T ss_pred ccHHHHHHHhhcCCceEEEEC
Confidence 999999876 3555554
No 116
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=95.20 E-value=0.078 Score=56.19 Aligned_cols=42 Identities=21% Similarity=0.071 Sum_probs=37.9
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~ 759 (894)
++.+|+.++++.|++.|+++.|+|+-....+..+-...||..
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~ 149 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSD 149 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChh
Confidence 467999999999999999999999999999998888888753
No 117
>PRK06769 hypothetical protein; Validated
Probab=95.17 E-value=0.099 Score=52.03 Aligned_cols=27 Identities=22% Similarity=0.221 Sum_probs=24.7
Q ss_pred ccCChHHHHHHHHHcCCeEEEEcCCcH
Q 002671 719 LQKGVPQCIDKLAQAGLKIWVLTGDKM 745 (894)
Q Consensus 719 lr~~v~~~I~~L~~aGIkv~~lTGD~~ 745 (894)
+.+|++++++.|++.|+++.++|+...
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 579999999999999999999998753
No 118
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=95.05 E-value=0.12 Score=51.17 Aligned_cols=50 Identities=20% Similarity=0.151 Sum_probs=41.4
Q ss_pred EEEeeeecccccCChHHHHHHHHHcCCeEEEEcCC-cHHHHHHHHHhcccc
Q 002671 709 LVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGD-KMETAINIGFACSLL 758 (894)
Q Consensus 709 llG~~~ieD~lr~~v~~~I~~L~~aGIkv~~lTGD-~~~ta~~ia~~~gl~ 758 (894)
.....+-+-++.+|+.++++.|+++|+++.++|+- ....+..+....++.
T Consensus 36 ~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~ 86 (174)
T TIGR01685 36 IIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEIT 86 (174)
T ss_pred EEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcC
Confidence 44555556678899999999999999999999975 888888888877763
No 119
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=94.98 E-value=0.1 Score=54.08 Aligned_cols=41 Identities=12% Similarity=0.130 Sum_probs=35.9
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
++.+|+.++++.|++.|++++++|+-....+......+|+.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVR 134 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChH
Confidence 47799999999999999999999998887777777777764
No 120
>PRK11587 putative phosphatase; Provisional
Probab=94.76 E-value=0.15 Score=52.83 Aligned_cols=40 Identities=18% Similarity=0.183 Sum_probs=33.1
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl 757 (894)
++.+|+.++++.|+++|+++.++|+.....+...-...++
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l 122 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL 122 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC
Confidence 5679999999999999999999999877666555555555
No 121
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=94.71 E-value=0.082 Score=52.99 Aligned_cols=39 Identities=21% Similarity=0.279 Sum_probs=30.8
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
++.+|+.++|+.|+++|+++.++|+... +..+...+|+.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~ 125 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLI 125 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcH
Confidence 6779999999999999999999997532 34555666653
No 122
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=94.70 E-value=0.16 Score=55.11 Aligned_cols=38 Identities=24% Similarity=0.278 Sum_probs=31.9
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFAC 755 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~ 755 (894)
++.+|+.++++.|++.|+++.++|+-.......+-...
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~ 181 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTL 181 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Confidence 46799999999999999999999998777766654443
No 123
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=94.68 E-value=0.12 Score=55.24 Aligned_cols=42 Identities=14% Similarity=0.085 Sum_probs=37.9
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~ 759 (894)
++.+|+.++++.|++.|+++.|+|+.....+..+-..+|+..
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~ 150 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEG 150 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHh
Confidence 567999999999999999999999999999988888888753
No 124
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=94.66 E-value=0.16 Score=50.71 Aligned_cols=40 Identities=23% Similarity=0.210 Sum_probs=32.8
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
++.+++.++++.|+++|++++++|+-.... ..+...+|+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~ 124 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLR 124 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCH
Confidence 577999999999999999999999987776 4444446664
No 125
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=94.57 E-value=0.18 Score=58.61 Aligned_cols=42 Identities=14% Similarity=0.090 Sum_probs=38.5
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~ 759 (894)
++.+|+.++++.|++.|+++.++|+-....+..+...+|+..
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~ 371 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQ 371 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHh
Confidence 678999999999999999999999999999999988888753
No 126
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=94.56 E-value=0.092 Score=52.61 Aligned_cols=40 Identities=15% Similarity=0.229 Sum_probs=33.4
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 717 D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
-++.+|+.++++.|++.|+++.++|+. ..+..+...+|+.
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~ 126 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLT 126 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChH
Confidence 367899999999999999999999987 5566666677764
No 127
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=94.51 E-value=0.13 Score=49.66 Aligned_cols=27 Identities=26% Similarity=0.401 Sum_probs=24.8
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDK 744 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~ 744 (894)
++.+|+.++++.|++.|+++.++|...
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~ 53 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQS 53 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence 467999999999999999999999865
No 128
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=94.25 E-value=0.6 Score=46.86 Aligned_cols=37 Identities=8% Similarity=0.137 Sum_probs=31.6
Q ss_pred ChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 722 GVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 722 ~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
.+.+.+.+|+++|+.|+.+|.-...-....-+++|+-
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678999999999999999998877777777888764
No 129
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=93.98 E-value=0.18 Score=49.96 Aligned_cols=40 Identities=18% Similarity=0.282 Sum_probs=33.1
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCc-HHHHHHHHHhccc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDK-METAINIGFACSL 757 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~-~~ta~~ia~~~gl 757 (894)
.+-++++++++.|++.|++++++|+-. ...+..+.+.+|+
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 567999999999999999999999987 4556666666665
No 130
>PLN02811 hydrolase
Probab=93.91 E-value=0.19 Score=52.20 Aligned_cols=31 Identities=23% Similarity=0.354 Sum_probs=26.9
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHH
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETA 748 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta 748 (894)
++.+|+.++|+.|++.|+++.++||-.....
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~ 108 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHF 108 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhH
Confidence 5679999999999999999999998765533
No 131
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=93.79 E-value=0.25 Score=55.14 Aligned_cols=42 Identities=12% Similarity=0.117 Sum_probs=38.1
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~ 759 (894)
.+.+|+.++++.|+++|+++.++|+-....+..+-...||..
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~ 257 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRG 257 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHH
Confidence 367999999999999999999999999999999988888753
No 132
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=93.75 E-value=0.25 Score=49.56 Aligned_cols=27 Identities=30% Similarity=0.363 Sum_probs=24.6
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDK 744 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~ 744 (894)
.+.+|+.++++.|++.|+++.++|...
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~ 55 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQS 55 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 356999999999999999999999876
No 133
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=93.58 E-value=0.3 Score=47.27 Aligned_cols=40 Identities=15% Similarity=0.320 Sum_probs=33.3
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhc
Q 002671 716 EDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFAC 755 (894)
Q Consensus 716 eD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~ 755 (894)
+....+|+.++++.|++.|+++.++|+-....+....+..
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 3345589999999999999999999999888877766554
No 134
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=93.56 E-value=0.41 Score=50.85 Aligned_cols=42 Identities=12% Similarity=0.105 Sum_probs=32.0
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEcCCcHHHHH---HHHHhcccc
Q 002671 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAI---NIGFACSLL 758 (894)
Q Consensus 717 D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~---~ia~~~gl~ 758 (894)
.++-+|+.+.++.|++.|+++.++|++...... ......|+-
T Consensus 117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~ 161 (266)
T TIGR01533 117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFP 161 (266)
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcC
Confidence 345699999999999999999999998754333 444455663
No 135
>PRK09449 dUMP phosphatase; Provisional
Probab=93.48 E-value=0.46 Score=49.29 Aligned_cols=40 Identities=15% Similarity=0.044 Sum_probs=33.6
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
++.+|+.++++.|+ +|+++.++|......+...-...|+.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLR 134 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChH
Confidence 36799999999999 68999999998888777776777764
No 136
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=93.46 E-value=0.11 Score=50.23 Aligned_cols=43 Identities=16% Similarity=0.010 Sum_probs=37.2
Q ss_pred ecccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 715 VEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 715 ieD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
..-++++|+.+.++.|+ .++++.|+|.-....|..+...+++.
T Consensus 42 ~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~ 84 (148)
T smart00577 42 VYVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPK 84 (148)
T ss_pred EEEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcC
Confidence 34467999999999999 57999999999999999988877763
No 137
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=93.25 E-value=0.35 Score=53.58 Aligned_cols=25 Identities=32% Similarity=0.486 Sum_probs=23.7
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcC
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTG 742 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTG 742 (894)
++.+++.++++.|+++|+++.|+|+
T Consensus 30 ~l~pGV~e~L~~Lk~~G~kL~IvTN 54 (354)
T PRK05446 30 AFEPGVIPALLKLQKAGYKLVMVTN 54 (354)
T ss_pred eECcCHHHHHHHHHhCCCeEEEEEC
Confidence 6779999999999999999999998
No 138
>PLN02940 riboflavin kinase
Probab=93.03 E-value=0.29 Score=55.30 Aligned_cols=40 Identities=13% Similarity=0.043 Sum_probs=33.2
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHH-hccc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGF-ACSL 757 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~-~~gl 757 (894)
++.+|+.++++.|++.|+++.|+|+-....+..... ..|+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl 133 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGW 133 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccCh
Confidence 467999999999999999999999998877765544 4555
No 139
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=92.86 E-value=0.29 Score=45.99 Aligned_cols=39 Identities=10% Similarity=0.064 Sum_probs=33.2
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCC-cHHHHHHHHHhcc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGD-KMETAINIGFACS 756 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD-~~~ta~~ia~~~g 756 (894)
++.+|+.++++.|+++|+++.++|+- ....+..+.+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68899999999999999999999999 6776666655544
No 140
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=92.77 E-value=0.43 Score=48.66 Aligned_cols=39 Identities=15% Similarity=0.121 Sum_probs=31.2
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl 757 (894)
++-+|+.++++.|+++|+++.|+|+-... +......+|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l 143 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGL 143 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCc
Confidence 57799999999999999999999985543 4555556665
No 141
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=92.54 E-value=0.59 Score=45.85 Aligned_cols=26 Identities=35% Similarity=0.542 Sum_probs=23.4
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCC
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGD 743 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD 743 (894)
++-+|+.++|+.|+++|+++.++|.-
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 35589999999999999999999974
No 142
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=92.54 E-value=0.38 Score=43.14 Aligned_cols=48 Identities=15% Similarity=0.174 Sum_probs=36.1
Q ss_pred EeeeecccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHH---Hhcccc
Q 002671 711 GATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIG---FACSLL 758 (894)
Q Consensus 711 G~~~ieD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia---~~~gl~ 758 (894)
|++...+.+=||+.++|+.|+++|++++++|-....+...++ ..+|+-
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 666677888899999999999999999999998766655544 445653
No 143
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=91.69 E-value=1.4 Score=43.88 Aligned_cols=27 Identities=19% Similarity=0.346 Sum_probs=24.2
Q ss_pred ccCChHHHHHHHHHcCCeEEEEcCCcH
Q 002671 719 LQKGVPQCIDKLAQAGLKIWVLTGDKM 745 (894)
Q Consensus 719 lr~~v~~~I~~L~~aGIkv~~lTGD~~ 745 (894)
+.+|++++|+.|+++|+++.++|.-+.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 568999999999999999999997653
No 144
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=91.31 E-value=0.69 Score=45.64 Aligned_cols=27 Identities=26% Similarity=0.431 Sum_probs=23.5
Q ss_pred ccCChHHHHHHHHHcCCeEEEEcCCcH
Q 002671 719 LQKGVPQCIDKLAQAGLKIWVLTGDKM 745 (894)
Q Consensus 719 lr~~v~~~I~~L~~aGIkv~~lTGD~~ 745 (894)
+-+|+.++++.|+++|+++.++|.-..
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSG 69 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 349999999999999999999997443
No 145
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=91.21 E-value=1.5 Score=45.49 Aligned_cols=40 Identities=18% Similarity=0.223 Sum_probs=32.7
Q ss_pred ecccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHh
Q 002671 715 VEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFA 754 (894)
Q Consensus 715 ieD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~ 754 (894)
++-++.+|+.++++.|+++|+++.|+|..+......+-..
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~ 131 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGH 131 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhh
Confidence 3457889999999999999999999999877765555443
No 146
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=91.15 E-value=1.1 Score=46.48 Aligned_cols=30 Identities=23% Similarity=0.292 Sum_probs=26.8
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHH
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMET 747 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~t 747 (894)
+.-+++.++++.|++.|++|+++||+....
T Consensus 120 paip~al~l~~~l~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 120 PALPEGLKLYQKIIELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence 445899999999999999999999999755
No 147
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=90.71 E-value=0.96 Score=47.07 Aligned_cols=42 Identities=14% Similarity=0.148 Sum_probs=36.1
Q ss_pred cccCChHHHHHHH--HHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002671 718 KLQKGVPQCIDKL--AQAGLKIWVLTGDKMETAINIGFACSLLR 759 (894)
Q Consensus 718 ~lr~~v~~~I~~L--~~aGIkv~~lTGD~~~ta~~ia~~~gl~~ 759 (894)
|+.++.+++++.| ++.|+.+.|+|-=+..--..|-+.-||..
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~ 114 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRD 114 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcc
Confidence 5669999999999 45899999999999888888888888753
No 148
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=90.64 E-value=0.95 Score=46.77 Aligned_cols=41 Identities=20% Similarity=0.293 Sum_probs=36.2
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~ 759 (894)
++.+|+.++++.|++. ++++++|+-....+..+..+.|+..
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~ 137 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFP 137 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHh
Confidence 5679999999999999 9999999988888888888888743
No 149
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.40 E-value=2.7 Score=48.66 Aligned_cols=188 Identities=14% Similarity=0.173 Sum_probs=103.6
Q ss_pred hhhcccEEEEeeeecccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccccCceEEEEecCC-ch--hh---
Q 002671 702 MMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALN-SD--SV--- 775 (894)
Q Consensus 702 ~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~-~~--~~--- 775 (894)
+.-..-.|.|++...-+.+.+....|+.|-++-|+.+-.+-.+.....-.|.++||-....-.+.+.++. .. +.
T Consensus 810 Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa 889 (1354)
T KOG4383|consen 810 QAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPA 889 (1354)
T ss_pred HHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCC
Confidence 3335667999999999999999999999999999999999999999999999999865433233322211 00 00
Q ss_pred -HH-HHHHHHHHhHHHHHHhhhhhhhc---cCCCCCceEE-EEeCchhhhhcchH---HHHHHHHHhhcc---C-----e
Q 002671 776 -GK-AAKEAVKDNILMQITNASQMIKL---ERDPHAAYAL-IIEGKTLAYALEDD---MKHHFLGLAVEC---A-----S 838 (894)
Q Consensus 776 -~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l-vi~G~~l~~~~~~~---~~~~~~~~~~~~---~-----~ 838 (894)
.+ ..++....+--.++...+.+... ++....-... -++...-.....++ +-.-+.+...+. . +
T Consensus 890 ~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV 969 (1354)
T KOG4383|consen 890 HEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLV 969 (1354)
T ss_pred ChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceee
Confidence 00 00000000000011000000000 0000000000 00000000000000 000011111111 1 1
Q ss_pred EEEEeCCchhHHHHHHHHhhcCCCEEEEEcCChhcHH--HHHhCCccEEecCcc
Q 002671 839 VICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVG--MIQEADIGIGISGVE 890 (894)
Q Consensus 839 vv~~r~~P~qK~~iv~~lk~~~~~~v~~iGDG~ND~~--ml~~AdvGI~i~g~e 890 (894)
-.|..++|+.--++++.+|+ .|.+|+..|..+|-.. ..-+|||+|++-..|
T Consensus 970 ~LFTDcnpeamcEMIeIMQE-~GEVtcclGS~aN~rNSciflkadISialD~l~ 1022 (1354)
T KOG4383|consen 970 GLFTDCNPEAMCEMIEIMQE-NGEVTCCLGSCANARNSCIFLKADISIALDDLE 1022 (1354)
T ss_pred eeccCCCHHHHHHHHHHHHH-cCcEEEEeccccccccceEEEccceeEEeccCC
Confidence 27899999999999999999 8999999999988654 356899999885543
No 150
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=90.34 E-value=0.81 Score=50.47 Aligned_cols=37 Identities=16% Similarity=0.194 Sum_probs=33.1
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHh
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFA 754 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~ 754 (894)
++-+++.++|+.|+++|+++.++|.-....|..+...
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHh
Confidence 3468999999999999999999999999988887766
No 151
>PLN02151 trehalose-phosphatase
Probab=90.23 E-value=7.5 Score=43.06 Aligned_cols=73 Identities=22% Similarity=0.258 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHHhhhhhCHHHHHHHHHHhhh-cc----cEEEEeee----eccc--ccCChHHHHHHHHHcCCeEEEE
Q 002671 672 SEYSAWNSEFQKAKSSIGADREATLEHVSDMME-KD----LILVGATA----VEDK--LQKGVPQCIDKLAQAGLKIWVL 740 (894)
Q Consensus 672 ~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE-~d----l~llG~~~----ieD~--lr~~v~~~I~~L~~aGIkv~~l 740 (894)
.+|..|..++-.|...+ +++..... +. |.|=|.++ --|. +-+++.++|+.|. .+..|+++
T Consensus 71 ~~~~~w~~~~p~a~~~~--------~~~~~~~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIv 141 (354)
T PLN02151 71 NKQSCWIKEHPSALNMF--------EEILHKSEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIV 141 (354)
T ss_pred hhHHHHHHhCChHHHHH--------HHHHHhhcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEE
Confidence 57899999988887655 11212111 11 12223333 2222 4567788999998 56899999
Q ss_pred cCCcHHHHHHHHH
Q 002671 741 TGDKMETAINIGF 753 (894)
Q Consensus 741 TGD~~~ta~~ia~ 753 (894)
||+..........
T Consensus 142 SGR~~~~l~~~~~ 154 (354)
T PLN02151 142 SGRCREKVSSFVK 154 (354)
T ss_pred ECCCHHHHHHHcC
Confidence 9999998877654
No 152
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=89.95 E-value=0.69 Score=47.46 Aligned_cols=29 Identities=24% Similarity=0.290 Sum_probs=25.4
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHH
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKME 746 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ 746 (894)
++.+++.++++.|+++|++++++|.....
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~ 122 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPT 122 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 56799999999999999999999986543
No 153
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=89.89 E-value=1.3 Score=45.13 Aligned_cols=30 Identities=23% Similarity=0.306 Sum_probs=26.3
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHH
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMET 747 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~t 747 (894)
++.+|+.++++.|+++|+++.++|.-+...
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~ 113 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH 113 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhh
Confidence 467999999999999999999999966553
No 154
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=89.88 E-value=1 Score=45.25 Aligned_cols=44 Identities=27% Similarity=0.413 Sum_probs=31.3
Q ss_pred hhHHHHHHHHhhcCC--CEEEEEcCChhcHHHHHhCC----ccEEecCcc
Q 002671 847 KQKALVTRLVKEGTG--KTTLAIGDGANDVGMIQEAD----IGIGISGVE 890 (894)
Q Consensus 847 ~qK~~iv~~lk~~~~--~~v~~iGDG~ND~~ml~~Ad----vGI~i~g~e 890 (894)
..|+.+++.+.+..+ ...+.+||++.|+.||+.+. +.|+.-|.|
T Consensus 190 g~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNe 239 (315)
T COG4030 190 GEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNE 239 (315)
T ss_pred cchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCc
Confidence 457777777765433 34689999999999999874 445555654
No 155
>PLN02645 phosphoglycolate phosphatase
Probab=89.58 E-value=1.3 Score=48.54 Aligned_cols=47 Identities=30% Similarity=0.437 Sum_probs=39.7
Q ss_pred EeeeecccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHH---Hhccc
Q 002671 711 GATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIG---FACSL 757 (894)
Q Consensus 711 G~~~ieD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia---~~~gl 757 (894)
|++.-.+.+=++++++|+.|++.|++++++|+....+...++ ..+|+
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 667667777899999999999999999999999977777766 44565
No 156
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=88.74 E-value=1.8 Score=45.57 Aligned_cols=48 Identities=10% Similarity=0.127 Sum_probs=37.2
Q ss_pred EeeeecccccCChHHHHHHHHHcCCeEEEEcCCcHHHHH--HHHHhcccc
Q 002671 711 GATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAI--NIGFACSLL 758 (894)
Q Consensus 711 G~~~ieD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~--~ia~~~gl~ 758 (894)
|.+.-...+-++++++|+.|+++|+++.++|.-....+. ....++|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 566666788899999999999999999999995544333 455667764
No 157
>PHA02597 30.2 hypothetical protein; Provisional
Probab=88.48 E-value=2.3 Score=43.02 Aligned_cols=39 Identities=13% Similarity=0.020 Sum_probs=26.0
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl 757 (894)
++.||+.++++.|++.+ +.+++|.-+..+....-..+++
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l 112 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNL 112 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCH
Confidence 35799999999999985 5677776444433333344444
No 158
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=86.16 E-value=2.2 Score=54.69 Aligned_cols=41 Identities=20% Similarity=0.032 Sum_probs=36.4
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
.+-+|+.+.++.|+++|++++|+|+-....+..+-...|+.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~ 201 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLP 201 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCC
Confidence 35699999999999999999999999888888887888874
No 159
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=85.79 E-value=5.1 Score=38.86 Aligned_cols=40 Identities=15% Similarity=0.214 Sum_probs=34.1
Q ss_pred ccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 719 lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
.-+++.+=+.+++++|+++.++|--+..-+...+..+|+-
T Consensus 47 ~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~ 86 (175)
T COG2179 47 ATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP 86 (175)
T ss_pred CCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc
Confidence 3466777889999999999999999888888888888873
No 160
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=84.73 E-value=5.4 Score=39.66 Aligned_cols=47 Identities=19% Similarity=0.372 Sum_probs=36.2
Q ss_pred CeEEEEeCCchh--------HHHHHHHHhhcC--CCEEEEEcCChhcHHHHHhCCcc
Q 002671 837 ASVICCRVSPKQ--------KALVTRLVKEGT--GKTTLAIGDGANDVGMIQEADIG 883 (894)
Q Consensus 837 ~~vv~~r~~P~q--------K~~iv~~lk~~~--~~~v~~iGDG~ND~~ml~~AdvG 883 (894)
..+.+|...|++ ...+.+.++++. -....+|||-..|..+-..|+++
T Consensus 88 d~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 88 DGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred ceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 456788888875 467777777632 25789999999999998888887
No 161
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=83.83 E-value=4.9 Score=42.04 Aligned_cols=165 Identities=11% Similarity=0.047 Sum_probs=70.0
Q ss_pred cccCChHHHHHHHHHcC-CeEEEEcCCcHHHHHHHHH--hccccccCceEEEEecCCchhh-HHHHHHHHHHhHHHHHHh
Q 002671 718 KLQKGVPQCIDKLAQAG-LKIWVLTGDKMETAINIGF--ACSLLRQGMKQICITALNSDSV-GKAAKEAVKDNILMQITN 793 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aG-Ikv~~lTGD~~~ta~~ia~--~~gl~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~ 793 (894)
.+-+++.++++.|.+.. ..|+|+||+.......... .++++.++.-.+...+...... ...........+...+..
T Consensus 19 ~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 98 (235)
T PF02358_consen 19 VPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRRPGGSEWTNLPADEDLEWKDEVREILEY 98 (235)
T ss_dssp ---HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEETTE-EEE-TTGGGGHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEeccCccccccccccccchHHHHHHHHHHHH
Confidence 34567889999998774 5799999999998555422 2233333322222222211000 000000011111111211
Q ss_pred hhhhhhccCCCCCceEEEEeCchhhhh----cchHHHHHHHHHhhc--------cCeEEEEeCCchhHHHHHHHHhhcCC
Q 002671 794 ASQMIKLERDPHAAYALIIEGKTLAYA----LEDDMKHHFLGLAVE--------CASVICCRVSPKQKALVTRLVKEGTG 861 (894)
Q Consensus 794 ~~~~~~~~~~~~~~~~lvi~G~~l~~~----~~~~~~~~~~~~~~~--------~~~vv~~r~~P~qK~~iv~~lk~~~~ 861 (894)
.........-..+.+++.+.-.....- ...++..++..+... -+.+|=.|..-..|...|+.+-+..+
T Consensus 99 ~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEvrp~~~~KG~av~~ll~~~~ 178 (235)
T PF02358_consen 99 FAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEVRPPGVNKGSAVRRLLEELP 178 (235)
T ss_dssp HHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEEE-TT--HHHHHHHHHTTS-
T ss_pred HHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEEEeCCCChHHHHHHHHHhcC
Confidence 111111111122333444433222211 112333333332221 13345555555559999997765443
Q ss_pred ------CEEEEEcCChhcHHHHHhCCc
Q 002671 862 ------KTTLAIGDGANDVGMIQEADI 882 (894)
Q Consensus 862 ------~~v~~iGDG~ND~~ml~~Adv 882 (894)
..++++||-..|-.|++...=
T Consensus 179 ~~~~~~~~~l~~GDD~tDE~~f~~~~~ 205 (235)
T PF02358_consen 179 FAGPKPDFVLYIGDDRTDEDAFRALRE 205 (235)
T ss_dssp --------EEEEESSHHHHHHHHTTTT
T ss_pred ccccccceeEEecCCCCCHHHHHHHHh
Confidence 379999999999999998543
No 162
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=83.64 E-value=2.6 Score=43.54 Aligned_cols=38 Identities=8% Similarity=0.114 Sum_probs=30.6
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
++.+|++++++.| ++++.++|+.....+...-...|+.
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~ 125 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGML 125 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChH
Confidence 4558999999998 4999999998887777766666664
No 163
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=83.27 E-value=7.4 Score=37.75 Aligned_cols=34 Identities=29% Similarity=0.348 Sum_probs=30.8
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHH
Q 002671 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAIN 750 (894)
Q Consensus 717 D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ 750 (894)
|..++|+.+....+++.|++++-||++..-.|..
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~ 59 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANR 59 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHH
Confidence 7999999999999999999999999998765544
No 164
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=82.78 E-value=5.8 Score=40.18 Aligned_cols=41 Identities=15% Similarity=0.138 Sum_probs=33.8
Q ss_pred cccCChHHHHHHHHHcCC-eEEEEcCCcHHHHHHHHHhcccc
Q 002671 718 KLQKGVPQCIDKLAQAGL-KIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGI-kv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
|+-|++.++|+.+++.|. .++|+|--+..-...+-+..|+-
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~ 125 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIH 125 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHH
Confidence 455999999999999997 99999988887777777776663
No 165
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=81.62 E-value=3.9 Score=42.62 Aligned_cols=29 Identities=17% Similarity=0.290 Sum_probs=25.9
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHH
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKME 746 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ 746 (894)
+.=+++.+.++.+++.|++|..+||++..
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~ 143 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPES 143 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCch
Confidence 34489999999999999999999999875
No 166
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=80.83 E-value=5.8 Score=39.58 Aligned_cols=38 Identities=11% Similarity=-0.018 Sum_probs=31.7
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
++.+++.++++.|+ .+++++|.-....+..+....|+.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~ 121 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIE 121 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcH
Confidence 36689999999997 589999998888888888888874
No 167
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=79.63 E-value=3.8 Score=43.37 Aligned_cols=50 Identities=8% Similarity=0.077 Sum_probs=41.1
Q ss_pred EeeeecccccCChHHHHHHHHHcCCeEEEEcC---CcHHHHHHHHHhcccccc
Q 002671 711 GATAVEDKLQKGVPQCIDKLAQAGLKIWVLTG---DKMETAINIGFACSLLRQ 760 (894)
Q Consensus 711 G~~~ieD~lr~~v~~~I~~L~~aGIkv~~lTG---D~~~ta~~ia~~~gl~~~ 760 (894)
|++.-.+.+=+++.++|+.|++.|++++++|| +..+.......++|+-..
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~ 62 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPAT 62 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 55555666678999999999999999999996 778888888888887543
No 168
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=79.04 E-value=3 Score=44.36 Aligned_cols=48 Identities=17% Similarity=0.218 Sum_probs=37.1
Q ss_pred Eeeeeccc----ccCChHHHHHHHHHcCCeEEEEcCCcHHH---HHHHHHhcccc
Q 002671 711 GATAVEDK----LQKGVPQCIDKLAQAGLKIWVLTGDKMET---AINIGFACSLL 758 (894)
Q Consensus 711 G~~~ieD~----lr~~v~~~I~~L~~aGIkv~~lTGD~~~t---a~~ia~~~gl~ 758 (894)
|++.-.+. +=+++.++|+.|+++|++++++||++..+ ......++|+-
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 55555555 77899999999999999999999987776 44445556763
No 169
>PRK10444 UMP phosphatase; Provisional
Probab=78.24 E-value=2.3 Score=45.00 Aligned_cols=45 Identities=16% Similarity=0.271 Sum_probs=40.1
Q ss_pred EeeeecccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhc
Q 002671 711 GATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFAC 755 (894)
Q Consensus 711 G~~~ieD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~ 755 (894)
|++.-.+.+-+++.++|+.|+++|++++++||+...+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 666667788899999999999999999999999998888877775
No 170
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=77.53 E-value=9.3 Score=37.59 Aligned_cols=43 Identities=14% Similarity=0.203 Sum_probs=35.7
Q ss_pred ecccccCChHHHHHHHHHcCC--eEEEEcCC-------cHHHHHHHHHhccc
Q 002671 715 VEDKLQKGVPQCIDKLAQAGL--KIWVLTGD-------KMETAINIGFACSL 757 (894)
Q Consensus 715 ieD~lr~~v~~~I~~L~~aGI--kv~~lTGD-------~~~ta~~ia~~~gl 757 (894)
=++++-++..+.+++|++.+. +|+|+|-- ....|..+++.+|+
T Consensus 56 ~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgI 107 (168)
T PF09419_consen 56 YEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGI 107 (168)
T ss_pred CcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCC
Confidence 356777899999999999987 49999985 36778888888886
No 171
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=76.95 E-value=3.6 Score=44.03 Aligned_cols=41 Identities=10% Similarity=0.126 Sum_probs=37.5
Q ss_pred cc-CChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002671 719 LQ-KGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (894)
Q Consensus 719 lr-~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~ 759 (894)
+| +++.+++++|+++|+++.++|+-....+...-..+||..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 45 899999999999999999999988999999999999964
No 172
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=74.58 E-value=64 Score=41.85 Aligned_cols=21 Identities=29% Similarity=0.156 Sum_probs=18.5
Q ss_pred CCeEEEee--ccccccCcEEEee
Q 002671 145 NGVFSYKP--WEKIQVGDIVKVE 165 (894)
Q Consensus 145 ~g~~~~i~--~~~L~vGDII~l~ 165 (894)
-|....+. ..+..|.|.+.++
T Consensus 249 pGDiv~l~~~~g~~iPaD~~ll~ 271 (1054)
T TIGR01657 249 PGDIVSIPRPEEKTMPCDSVLLS 271 (1054)
T ss_pred CCCEEEEecCCCCEecceEEEEe
Confidence 47788898 8999999999996
No 173
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=73.08 E-value=10 Score=48.36 Aligned_cols=22 Identities=14% Similarity=-0.044 Sum_probs=19.4
Q ss_pred CCeEEEeeccccccCcEEEeec
Q 002671 145 NGVFSYKPWEKIQVGDIVKVEK 166 (894)
Q Consensus 145 ~g~~~~i~~~~L~vGDII~l~~ 166 (894)
-|....+...+.+|.|.+.++.
T Consensus 186 ~GDiV~l~~Gd~IPaD~~li~g 207 (941)
T TIGR01517 186 VGDIVSLSTGDVVPADGVFISG 207 (941)
T ss_pred CCCEEEECCCCEecccEEEEEc
Confidence 4789999999999999999964
No 174
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=72.62 E-value=5.4 Score=42.77 Aligned_cols=41 Identities=15% Similarity=0.105 Sum_probs=36.2
Q ss_pred cc-CChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002671 719 LQ-KGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (894)
Q Consensus 719 lr-~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~ 759 (894)
+| +++.+++++|+++|+++.++|+-....+..+....||..
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~ 189 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEG 189 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCc
Confidence 35 889999999999999999999777888888999999853
No 175
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=71.91 E-value=11 Score=37.60 Aligned_cols=35 Identities=14% Similarity=0.005 Sum_probs=30.0
Q ss_pred hHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 723 VPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 723 v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
..+++..|++. +++.++||-....+..+-...|+.
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~ 126 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLR 126 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcH
Confidence 35899999865 899999999999999888888874
No 176
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=70.15 E-value=4.1 Score=38.08 Aligned_cols=33 Identities=15% Similarity=0.091 Sum_probs=28.7
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEcCCcHHHHH
Q 002671 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAI 749 (894)
Q Consensus 717 D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~ 749 (894)
+++.+++.++++.|++.|++++++||+......
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 557788899999999999999999999887654
No 177
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=68.28 E-value=74 Score=33.90 Aligned_cols=170 Identities=7% Similarity=-0.021 Sum_probs=84.4
Q ss_pred eeeecccccCChHHHHHHHHHc-CCeEEEEcCCcHHHHHHHHHhc--cccccCceEE-EEecCCchhhHHHHHHHHHHhH
Q 002671 712 ATAVEDKLQKGVPQCIDKLAQA-GLKIWVLTGDKMETAINIGFAC--SLLRQGMKQI-CITALNSDSVGKAAKEAVKDNI 787 (894)
Q Consensus 712 ~~~ieD~lr~~v~~~I~~L~~a-GIkv~~lTGD~~~ta~~ia~~~--gl~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~ 787 (894)
.-.....+-++..++++.|... ..-+||+||+++.-......-- ||+..+.-.. .+++.............-...+
T Consensus 34 ~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~~~~~~~~v 113 (266)
T COG1877 34 PHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEV 113 (266)
T ss_pred cCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEecCHHHHhhHHHHH
Confidence 3334456667888999999887 5679999999998777765522 3333322222 2333322211111111111112
Q ss_pred HHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcc--hHHHHHHHHHhhc-c-----CeEEEEeCCchhHHHHHHHHhhc
Q 002671 788 LMQITNASQMIKLERDPHAAYALIIEGKTLAYALE--DDMKHHFLGLAVE-C-----ASVICCRVSPKQKALVTRLVKEG 859 (894)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~--~~~~~~~~~~~~~-~-----~~vv~~r~~P~qK~~iv~~lk~~ 859 (894)
...++..........-..+.+++.+.=.....-.. ..+......+... | +.+|-+|-+-.-|+..++.+.+.
T Consensus 114 ~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~ 193 (266)
T COG1877 114 AAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIKYIMDE 193 (266)
T ss_pred HHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHHHHHhc
Confidence 22222222211111111122222221100000000 0011111111111 2 55688888777899999977654
Q ss_pred CC---CEEEEEcCChhcHHHHHhCC
Q 002671 860 TG---KTTLAIGDGANDVGMIQEAD 881 (894)
Q Consensus 860 ~~---~~v~~iGDG~ND~~ml~~Ad 881 (894)
.+ ..++..||-.-|-.|+++.+
T Consensus 194 ~~~~~~~~~~aGDD~TDE~~F~~v~ 218 (266)
T COG1877 194 LPFDGRFPIFAGDDLTDEDAFAAVN 218 (266)
T ss_pred CCCCCCcceecCCCCccHHHHHhhc
Confidence 33 35899999999999999887
No 178
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=66.43 E-value=30 Score=36.77 Aligned_cols=29 Identities=24% Similarity=0.295 Sum_probs=25.5
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHH
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKME 746 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ 746 (894)
|.-+++.+..+.|++.|++|+++||+...
T Consensus 145 pAlp~al~ly~~l~~~G~kIf~VSgR~e~ 173 (275)
T TIGR01680 145 PALPETLKNYNKLVSLGFKIIFLSGRLKD 173 (275)
T ss_pred CCChHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 34478999999999999999999999864
No 179
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=65.88 E-value=14 Score=38.57 Aligned_cols=28 Identities=11% Similarity=0.267 Sum_probs=22.8
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHH
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKME 746 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ 746 (894)
++-+|++++++.|++. +++.++|.-+..
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~ 140 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ 140 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch
Confidence 4558999999999975 999999985543
No 180
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=65.55 E-value=5.2 Score=39.25 Aligned_cols=45 Identities=11% Similarity=-0.006 Sum_probs=38.6
Q ss_pred eeeecccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccc
Q 002671 712 ATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (894)
Q Consensus 712 ~~~ieD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl 757 (894)
...+.=.+|||+.+.++.|.+. +.++|.|--....|..+...++.
T Consensus 36 ~~~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp 80 (162)
T TIGR02251 36 IIPVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDR 80 (162)
T ss_pred EEEEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCc
Confidence 3345557999999999999987 99999999999999999887764
No 181
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=65.24 E-value=38 Score=40.18 Aligned_cols=182 Identities=12% Similarity=0.054 Sum_probs=111.4
Q ss_pred CeeecCCcchhhhhHHHHHHHhhhHHHHHHHHHHHHh-cccCCCCCCchhhhhHHHHHHHHHHHHHHHHHHHhhchhhhc
Q 002671 57 NYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLS-VTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDKEVN 135 (894)
Q Consensus 57 N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~il~-~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~d~~r~k~~~~~n 135 (894)
+..+...|+++.+++...|.+|.+..++++.+..++. +-.-+...++.-+.+++++.++--+.+-+..++|.+..+..+
T Consensus 85 ~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r~~rd~~~Nse~ 164 (1051)
T KOG0210|consen 85 RNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKRRRRDRELNSEK 164 (1051)
T ss_pred hhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Confidence 3344567899999999999999999999998876653 211122444555566667778888889999999998877665
Q ss_pred cceE----------EEEeCCCeEEEeeccccccCcEEEeecCcccCceEEEeeecCCCCcE-------EEEecccCCCCc
Q 002671 136 ARKV----------SVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGIC-------YVETMNLDGETN 198 (894)
Q Consensus 136 ~~~~----------~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~-------~Vdes~LtGEs~ 198 (894)
-.+. .-+ .-|....+.-.+=+|-|.|.++.-|.-- -..+.++..||.. .--+..++-++.
T Consensus 165 y~~ltr~~~~~~~Ss~i-~vGDvi~v~K~~RVPADmilLrTsd~sg--~~FiRTDQLDGETDWKLrl~vp~tQ~l~~~~e 241 (1051)
T KOG0210|consen 165 YTKLTRDGTRREPSSDI-KVGDVIIVHKDERVPADMILLRTSDKSG--SCFIRTDQLDGETDWKLRLPVPRTQHLTEDSE 241 (1051)
T ss_pred heeeccCCccccccccc-ccccEEEEecCCcCCcceEEEEccCCCC--ceEEeccccCCcccceeeccchhhccCCcccc
Confidence 3221 112 2366777888888999999998665431 1234444333421 011334444433
Q ss_pred ceeecccccCCCCCchhhhccceeEEEeeCCC------CCceeEEEEEEECCe
Q 002671 199 LKVKRAMEATSPLNEDEAFKEFTGTVKCENPN------PSLYTFVGNIEYDRE 245 (894)
Q Consensus 199 ~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~------~~~~~f~Gt~~~~g~ 245 (894)
+-.-. .....+..+...+-|++...+.+ -....+++|++-.|.
T Consensus 242 l~~i~----v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t 290 (1051)
T KOG0210|consen 242 LMEIS----VYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGT 290 (1051)
T ss_pred hheEE----EeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCc
Confidence 32211 00111233455677777765443 234568888887776
No 182
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=62.33 E-value=15 Score=36.93 Aligned_cols=49 Identities=22% Similarity=0.283 Sum_probs=42.8
Q ss_pred cEEEEeeeecccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhc
Q 002671 707 LILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFAC 755 (894)
Q Consensus 707 l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~ 755 (894)
+.+-|.+.++|..-+++.|+++.|+.++.+|..+|.-..+.-..+..++
T Consensus 12 lDlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL 60 (262)
T KOG3040|consen 12 LDLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERL 60 (262)
T ss_pred EeccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHH
Confidence 4567999999999999999999999999999999988887777666554
No 183
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=61.58 E-value=23 Score=41.59 Aligned_cols=27 Identities=22% Similarity=0.439 Sum_probs=23.8
Q ss_pred ccCChHHHHHHHHHcCCeEEEEcCCcH
Q 002671 719 LQKGVPQCIDKLAQAGLKIWVLTGDKM 745 (894)
Q Consensus 719 lr~~v~~~I~~L~~aGIkv~~lTGD~~ 745 (894)
+-++++++|+.|+++|++++|+|.-..
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGG 224 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcc
Confidence 359999999999999999999998443
No 184
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=61.56 E-value=47 Score=38.89 Aligned_cols=43 Identities=14% Similarity=0.093 Sum_probs=30.5
Q ss_pred CchhHHHHHHHHhhcCCCEEEEEcCChhcHHHHHhCCccEEecC
Q 002671 845 SPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISG 888 (894)
Q Consensus 845 ~P~qK~~iv~~lk~~~~~~v~~iGDG~ND~~ml~~AdvGI~i~g 888 (894)
.-++|..-++.... ......+.||..||.+||+.|+-+..+.-
T Consensus 173 ~Ge~Kv~rl~~~~g-~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 173 VGDHKRDAVLKEFG-DALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred ccHHHHHHHHHHhC-CCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 34567776663321 12223799999999999999999988754
No 185
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=60.53 E-value=26 Score=41.14 Aligned_cols=35 Identities=20% Similarity=0.102 Sum_probs=32.7
Q ss_pred CCCeEEEeeccccccCcEEEeecCcccCceEEEee
Q 002671 144 GNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLS 178 (894)
Q Consensus 144 r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ 178 (894)
|||+..++|..-|+.||||-+++|+..||.+.=++
T Consensus 162 RDGhlm~lP~~LLVeGDiIa~RPGQeafan~~g~~ 196 (1354)
T KOG4383|consen 162 RDGHLMELPRILLVEGDIIAFRPGQEAFANCEGFD 196 (1354)
T ss_pred ccCeeeecceeEEEeccEEEecCCccccccccccC
Confidence 89999999999999999999999999999887555
No 186
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=59.19 E-value=19 Score=38.77 Aligned_cols=50 Identities=18% Similarity=0.264 Sum_probs=36.7
Q ss_pred EeeeecccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHH---HHHhcccccc
Q 002671 711 GATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAIN---IGFACSLLRQ 760 (894)
Q Consensus 711 G~~~ieD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~---ia~~~gl~~~ 760 (894)
|++.-.+.+=+++.++|+.|+++|++++++||....+... -..++|+...
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~ 63 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGL 63 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 4555566777899999999999999999999976443333 3355777543
No 187
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=58.89 E-value=61 Score=41.28 Aligned_cols=166 Identities=10% Similarity=0.045 Sum_probs=92.3
Q ss_pred CCeEEEeeccccccCcEEEeecCcccCceEEEeeecCCCCcEEEEec---ccCCCCcceeecccccCCCCCchhhhccce
Q 002671 145 NGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETM---NLDGETNLKVKRAMEATSPLNEDEAFKEFT 221 (894)
Q Consensus 145 ~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes---~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~ 221 (894)
-|..+.+...|.+|-|...|+..+ . .++-+..+|...-=+. .+.++..|..
T Consensus 160 pGDiV~l~~gd~vPAD~rLl~~~~-l-----~VdEs~LTGES~pv~K~~~~~~~~~~~~~-------------------- 213 (917)
T COG0474 160 PGDIVLLEAGDVVPADLRLLESSD-L-----EVDESALTGESLPVEKQALPLTKSDAPLG-------------------- 213 (917)
T ss_pred CCcEEEECCCCccccceEEEEecC-c-----eEEcccccCCCcchhcccccccccccccc--------------------
Confidence 478999999999999999999876 3 3333322343221111 1122222221
Q ss_pred eEEEeeCCCCCceeEEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEecccchhhhccC-CCCCCcchHHHHHHH
Q 002671 222 GTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNAT-TSPSKRSGIEKKMDK 300 (894)
Q Consensus 222 g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~g~Vv~tG~~Tk~~~~~~-~~~~k~s~~~~~~~~ 300 (894)
.+.....|+||.+..|+... .+. ..|.-++-|+.++.+.... ....-.-.+.+....
T Consensus 214 -------~d~~n~l~sGt~V~~G~~~g-----------iVv----aTG~~T~~G~ia~~~~~~~~~~t~l~~~l~~~~~~ 271 (917)
T COG0474 214 -------LDRDNMLFSGTTVVSGRAKG-----------IVV----ATGFETEFGKIARLLPTKKEVKTPLQRKLNKLGKF 271 (917)
T ss_pred -------CCccceEEeCCEEEcceEEE-----------EEE----EEcCccHHHHHHHhhccccccCCcHHHHHHHHHHH
Confidence 11223669999999998322 112 5677788899988888773 333333445555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh-hccccCCCccccCCCCCccccCCCCCchhHHHHHHHHHHHhhccccchhhHHHHHHH
Q 002671 301 IIFILFAILVLISLISSIGFAV-KINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVK 379 (894)
Q Consensus 301 ~~~~~~~~~~~~~~i~~i~~~~-~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~l~i~~ 379 (894)
+..+.+.+.+++.++....... |... . +..+.-++.+.=...|..+.+++.+..
T Consensus 272 l~~~~l~~~~~~~~~~~~~~~~~~~~~----~---------------------~~~v~l~va~IPegLp~~vti~la~g~ 326 (917)
T COG0474 272 LLVLALVLGALVFVVGLFRGGNGLLES----F---------------------LTALALAVAAVPEGLPAVVTIALALGA 326 (917)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccHHHH----H---------------------HHHHHHHHhccccchHHHHHHHHHHHH
Confidence 5555544444444444332111 1211 1 134445666666777777776666554
Q ss_pred HHHH
Q 002671 380 FLQA 383 (894)
Q Consensus 380 ~~~~ 383 (894)
..-+
T Consensus 327 ~~ma 330 (917)
T COG0474 327 QRMA 330 (917)
T ss_pred HHHH
Confidence 4433
No 188
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=57.45 E-value=4.7e+02 Score=33.84 Aligned_cols=204 Identities=10% Similarity=-0.004 Sum_probs=102.2
Q ss_pred CCeEEEeeccccccCcEEEeecCcccCceEEEeeecCCCCcEEEEecccCCCCcceeecccccCCCCCchhhhccceeEE
Q 002671 145 NGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTV 224 (894)
Q Consensus 145 ~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i 224 (894)
-|....+...+..|.|.+.++.+. +.++.+.-+|...--+..- |.+. ..+.+.
T Consensus 161 ~GDiv~l~~Gd~IPaD~~il~~~~------l~VdeS~LTGES~pv~K~~-~~~~---~~~~~~----------------- 213 (997)
T TIGR01106 161 VGDLVEVKGGDRIPADLRIISAQG------CKVDNSSLTGESEPQTRSP-EFTH---ENPLET----------------- 213 (997)
T ss_pred CCCEEEECCCCEEeeeEEEEEccC------cEEEccccCCCCCceeccC-CCcc---cCcccc-----------------
Confidence 478999999999999999998652 2233333334332211111 2110 011110
Q ss_pred EeeCCCCCceeEEEEEEECCeeeecCCCCeeecceEeecCCeEEEEEEEecccchhhhccCCC-CCCcchHHHHHHHHHH
Q 002671 225 KCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTS-PSKRSGIEKKMDKIIF 303 (894)
Q Consensus 225 ~~e~p~~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~g~Vv~tG~~Tk~~~~~~~~-~~k~s~~~~~~~~~~~ 303 (894)
....|+||.+++|.... .+. ..|.=++.|.-.++....... ..-...+++..+.++.
T Consensus 214 -------~n~l~~Gt~v~~G~~~~-----------~V~----~tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~ 271 (997)
T TIGR01106 214 -------RNIAFFSTNCVEGTARG-----------IVV----NTGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITG 271 (997)
T ss_pred -------CCeEEeccEeeeeeEEE-----------EEE----EccccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHH
Confidence 11358999998886321 111 234445556655555444432 2224677888888877
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccCCCccccCCCCCccccCCCCCchhHHHHHHHHHHHhhccccchhhHHHHHHHH--H
Q 002671 304 ILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKF--L 381 (894)
Q Consensus 304 ~~~~~~~~~~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~sL~v~l~i~~~--~ 381 (894)
+.+++.+++.++..+...-|... + ...+...+..+-..+|..+.+++..... .
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~-----~--------------------~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~ 326 (997)
T TIGR01106 272 VAVFLGVSFFILSLILGYTWLEA-----V--------------------IFLIGIIVANVPEGLLATVTVCLTLTAKRMA 326 (997)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHH-----H--------------------HHHHHHHhhcCCccchHHHHHHHHHHHHHHH
Confidence 77666666555544433333321 1 0122223333445566666655544322 2
Q ss_pred HHHHHhccccccccCCCCCeEE--eccccccccccceEEEecC
Q 002671 382 QAIFINQDISMYDDESGIPAQA--RTSNLNEELGQVDTILSDK 422 (894)
Q Consensus 382 ~~~~i~~d~~m~~~~~~~~~~v--r~~~~~e~Lg~v~~I~~DK 422 (894)
....+-++...-.....-.++| |++.+.|.-=.|..++.|.
T Consensus 327 ~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~ 369 (997)
T TIGR01106 327 RKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDN 369 (997)
T ss_pred HCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECC
Confidence 1122223332222224555666 4566666555666666543
No 189
>PF12791 RsgI_N: Anti-sigma factor N-terminus; InterPro: IPR024449 The heat shock genes in Bacillus subtilis can be classified into several groups according to their regulation [], and the sigma gene, sigI, of Bacillus subtilis belongs to the group IV heat-shock response genes and has many orthologues in the bacterial phylum Firmicutes []. Regulation of sigma factor I is carried out by RsgI from the same operon. This entry represents the N-terminal cytoplasmic portion of RsgI ('upstream' of the single transmembrane helix) which has been shown to interact directly with Sigma-I [].
Probab=54.95 E-value=19 Score=28.16 Aligned_cols=39 Identities=13% Similarity=0.266 Sum_probs=31.9
Q ss_pred hccceEEEEeCCCeEEEeecc-ccccCcEEEeecCcccCc
Q 002671 134 VNARKVSVHVGNGVFSYKPWE-KIQVGDIVKVEKDQFFPA 172 (894)
Q Consensus 134 ~n~~~~~V~~r~g~~~~i~~~-~L~vGDII~l~~ge~iPa 172 (894)
+.+..+.|+..+|+|..|+-. +..+||.|.+...+..+.
T Consensus 3 i~~~~aiVlT~dGeF~~ik~~~~~~vG~eI~~~~~~~~~~ 42 (56)
T PF12791_consen 3 IKKKYAIVLTPDGEFIKIKRKPGMEVGQEIEFDEKDIINK 42 (56)
T ss_pred CcCCEEEEEcCCCcEEEEeCCCCCcccCEEEEechhhccc
Confidence 345678888899999998754 799999999998887654
No 190
>PTZ00445 p36-lilke protein; Provisional
Probab=53.13 E-value=23 Score=36.12 Aligned_cols=29 Identities=21% Similarity=0.151 Sum_probs=25.3
Q ss_pred ccCChHHHHHHHHHcCCeEEEEcCCcHHH
Q 002671 719 LQKGVPQCIDKLAQAGLKIWVLTGDKMET 747 (894)
Q Consensus 719 lr~~v~~~I~~L~~aGIkv~~lTGD~~~t 747 (894)
++++.+.-++.|+++||+|.++|=-.+++
T Consensus 76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~ 104 (219)
T PTZ00445 76 VTPDFKILGKRLKNSNIKISVVTFSDKEL 104 (219)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEccchhh
Confidence 67888999999999999999999766654
No 191
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=51.55 E-value=40 Score=34.86 Aligned_cols=43 Identities=21% Similarity=0.206 Sum_probs=38.8
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002671 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (894)
Q Consensus 717 D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~ 759 (894)
.++.+|+.+++..|++.|+++.+.|+-....+..+....|+..
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~ 127 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLD 127 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChh
Confidence 3677999999999999999999999999888889988889864
No 192
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=50.21 E-value=80 Score=32.33 Aligned_cols=41 Identities=15% Similarity=0.049 Sum_probs=32.5
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhccccc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLR 759 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~ 759 (894)
++-+++.++++.|+.. .+++++|--....+.....++||..
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~ 139 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLD 139 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChh
Confidence 4447888888888888 8899999877777778888888643
No 193
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=49.57 E-value=14 Score=36.38 Aligned_cols=34 Identities=6% Similarity=-0.018 Sum_probs=25.4
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
++.+|+.++++ +++++|.=.......+...+||.
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~ 123 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLP 123 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCH
Confidence 47789999998 36788887777777777777763
No 194
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=47.60 E-value=1.6e+02 Score=37.59 Aligned_cols=66 Identities=17% Similarity=0.377 Sum_probs=46.7
Q ss_pred hHHHHHHHHHhhccCeEEEE-----eCCc--hhHHHHHHHHhhcCC----CEEEEEcCChh-c-HHHHHhCCccEEecC
Q 002671 823 DDMKHHFLGLAVECASVICC-----RVSP--KQKALVTRLVKEGTG----KTTLAIGDGAN-D-VGMIQEADIGIGISG 888 (894)
Q Consensus 823 ~~~~~~~~~~~~~~~~vv~~-----r~~P--~qK~~iv~~lk~~~~----~~v~~iGDG~N-D-~~ml~~AdvGI~i~g 888 (894)
+++...+......|+.+.++ .+.| ..|.+.++.|..+.| +++.++||..| | ..||.--|-+|-+.|
T Consensus 924 ~elr~~Lr~~gLr~~~iys~~~~~LDVlP~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~G~~~tvi~~g 1002 (1050)
T TIGR02468 924 KELRKLLRIQGLRCHAVYCRNGTRLNVIPLLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTVILKG 1002 (1050)
T ss_pred HHHHHHHHhCCCceEEEeecCCcEeeeeeCCCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhCCceeEEEEec
Confidence 35666666666677644332 2455 449999999986644 56677999999 9 558778888887766
No 195
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=44.85 E-value=26 Score=37.35 Aligned_cols=46 Identities=15% Similarity=0.203 Sum_probs=39.1
Q ss_pred EEeeeecccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhc
Q 002671 710 VGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFAC 755 (894)
Q Consensus 710 lG~~~ieD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~ 755 (894)
=|++.--..+=+++.++|+.|+++|++++.+|--...+...++.++
T Consensus 16 DGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 16 DGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred cCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 4778888888899999999999999999999998888777544443
No 196
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=44.10 E-value=1.6e+02 Score=36.76 Aligned_cols=24 Identities=8% Similarity=0.063 Sum_probs=19.6
Q ss_pred cHHHHHHHHHHHHhcCCeEEEEEE
Q 002671 643 YEEATTKLLNEYGEAGLRTLALAY 666 (894)
Q Consensus 643 ~~~~~~~~l~~~~~~Glr~l~~A~ 666 (894)
.+....+.++.+.+.|.|+..+.-
T Consensus 443 ~R~~a~~aI~~l~~aGI~v~miTG 466 (755)
T TIGR01647 443 PRHDTKETIERARHLGVEVKMVTG 466 (755)
T ss_pred ChhhHHHHHHHHHHCCCeEEEECC
Confidence 566778888899999999888774
No 197
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=42.97 E-value=36 Score=31.22 Aligned_cols=37 Identities=24% Similarity=0.531 Sum_probs=29.3
Q ss_pred CChHHHHHHHHHcCC-eEEEEcCCcHHHHHHHHHhccc
Q 002671 721 KGVPQCIDKLAQAGL-KIWVLTGDKMETAINIGFACSL 757 (894)
Q Consensus 721 ~~v~~~I~~L~~aGI-kv~~lTGD~~~ta~~ia~~~gl 757 (894)
+.+++.++++.+.|+ .+|+.+|...+.++..|++.|+
T Consensus 66 ~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi 103 (116)
T PF13380_consen 66 DKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGI 103 (116)
T ss_dssp HHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-
T ss_pred HHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCC
Confidence 567899999999999 7999999999999999999887
No 198
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=40.35 E-value=47 Score=32.81 Aligned_cols=41 Identities=22% Similarity=0.258 Sum_probs=31.5
Q ss_pred cccCChHHHHHHHHHcCCeEEEEc-CCcHHHHHHHHHhcccc
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLT-GDKMETAINIGFACSLL 758 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lT-GD~~~ta~~ia~~~gl~ 758 (894)
.+-++|+++++.|++.|+++.++| -+.++.|..+-..+++.
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 456999999999999999999999 58899999999999987
No 199
>PF04551 GcpE: GcpE protein; InterPro: IPR004588 This protein previously of unknown biochemical function is essential in Escherichia coli. It has now been characterised as 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, which converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4CPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate in the sixth step of nonmevalonate terpenoid biosynthesis. The family is largely restricted to bacteria, where it is widely but not universally distributed. No homology can be detected between this family and other proteins.; GO: 0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity, 0016114 terpenoid biosynthetic process, 0055114 oxidation-reduction process; PDB: 2Y0F_C 3NOY_A.
Probab=39.55 E-value=3.8e+02 Score=29.69 Aligned_cols=168 Identities=24% Similarity=0.310 Sum_probs=93.8
Q ss_pred hhhHhhccCccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhCHHHHHHHHHHhhhcccEEE
Q 002671 631 IIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILV 710 (894)
Q Consensus 631 ~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~ll 710 (894)
.++++.....+...+...++++-+-..|+.-++++.|.-+....-+- | +.+++.+..-|. |
T Consensus 146 ~~~~ky~~t~~amvesA~~~~~~le~~~f~~iviSlKsSdv~~~i~a---y---------------r~la~~~dyPLH-L 206 (359)
T PF04551_consen 146 DILEKYGPTPEAMVESALEHVRILEELGFDDIVISLKSSDVPETIEA---Y---------------RLLAERMDYPLH-L 206 (359)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHCT-GGEEEEEEBSSHHHHHHH---H---------------HHHHHH--S-EE-E
T ss_pred HHHhhccchHHHHHHHHHHHHHHHHHCCCCcEEEEEEeCChHHHHHH---H---------------HHHHHhcCCCeE-E
Confidence 34444433333466777888999999999999999998665432211 1 112233333343 4
Q ss_pred Eeeeeccccc--CChHHHHHHHHHcCC--eEEE-EcCCcHH---HHHHHHHhccccccCceEEEEecCCchhhHHHHHHH
Q 002671 711 GATAVEDKLQ--KGVPQCIDKLAQAGL--KIWV-LTGDKME---TAINIGFACSLLRQGMKQICITALNSDSVGKAAKEA 782 (894)
Q Consensus 711 G~~~ieD~lr--~~v~~~I~~L~~aGI--kv~~-lTGD~~~---ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~ 782 (894)
|+|-=-.... -...-.|-.|-..|| .+++ +|+|+.+ .|..|-+++|+-....+.+ .
T Consensus 207 GvTEAG~~~~g~IkSsigiG~LL~~GIGDTIRVSLt~~p~~EV~va~~IL~al~lR~~g~~~I--S-------------- 270 (359)
T PF04551_consen 207 GVTEAGTGEDGTIKSSIGIGALLLDGIGDTIRVSLTGDPVEEVKVAFEILQALGLRKRGPEII--S-------------- 270 (359)
T ss_dssp EBSSEESCHHHHHHHHHHHHHHHHTT--SEEEE-ECSSCCCHHHHHHHHHHHTTSS-SS-EEE--E--------------
T ss_pred eecCCCCcccchhHHHHHHHHHHHcCCCCEEEEECCCCchHHHHHHHHHHHHhCcCcCCceee--e--------------
Confidence 7664322221 122255677888888 4443 5888764 6777888888854332211 1
Q ss_pred HHHhHHHHHHhhhhhhhccCCCCCceEEEEeCchhhhhcchHHHHHHHHHhhccCeEEEEeCCchhHHHHHHHHhhc---
Q 002671 783 VKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEG--- 859 (894)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~~P~qK~~iv~~lk~~--- 859 (894)
| --|.|. --+=..+++.++++
T Consensus 271 -----------------------------------------------------C--PtCGRt-~~Dl~~~~~~ie~~l~~ 294 (359)
T PF04551_consen 271 -----------------------------------------------------C--PTCGRT-EFDLQELVAEIEERLKH 294 (359)
T ss_dssp -----------------------------------------------------------TT---SHHHHHHHHHHHHCCC
T ss_pred -----------------------------------------------------C--CCCCCc-cchHHHHHHHHHHHHhc
Confidence 1 133443 23334455555544
Q ss_pred --CCCEEEEEcCChhcHHHHHhCCccEEecCc
Q 002671 860 --TGKTTLAIGDGANDVGMIQEADIGIGISGV 889 (894)
Q Consensus 860 --~~~~v~~iGDG~ND~~ml~~AdvGI~i~g~ 889 (894)
.+-+++..|==.|--+-.+.||+||+-+|.
T Consensus 295 l~~~lkIAVMGCiVNGPGEa~~AD~GiaGgg~ 326 (359)
T PF04551_consen 295 LKKGLKIAVMGCIVNGPGEAKDADIGIAGGGK 326 (359)
T ss_dssp HHCG-EEEEESSTCCCHHHCTTSSEEEE-E-T
T ss_pred CCCCceEEEEeeeecCCchhhhCceeeecCCC
Confidence 256789999999999999999999996543
No 200
>PRK10444 UMP phosphatase; Provisional
Probab=38.25 E-value=2.2e+02 Score=30.01 Aligned_cols=24 Identities=21% Similarity=0.284 Sum_probs=20.9
Q ss_pred CCEEEEEcCCh-hcHHHHHhCCccE
Q 002671 861 GKTTLAIGDGA-NDVGMIQEADIGI 884 (894)
Q Consensus 861 ~~~v~~iGDG~-ND~~ml~~AdvGI 884 (894)
...++||||.. +|+.+=+.|++-.
T Consensus 191 ~~~~v~IGD~~~tDi~~A~~~G~~~ 215 (248)
T PRK10444 191 SEETVIVGDNLRTDILAGFQAGLET 215 (248)
T ss_pred cccEEEECCCcHHHHHHHHHcCCCE
Confidence 46799999997 8999999998875
No 201
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=38.18 E-value=50 Score=32.11 Aligned_cols=45 Identities=13% Similarity=-0.025 Sum_probs=38.4
Q ss_pred eeecccccCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhcccc
Q 002671 713 TAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 713 ~~ieD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
....=++|||+.+.++.|++. +++++.|.-....|..+...++.-
T Consensus 53 ~~~~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 53 MWYLTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred eEEEEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 344556899999999999955 999999999999999999887754
No 202
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=37.72 E-value=72 Score=31.31 Aligned_cols=38 Identities=18% Similarity=0.219 Sum_probs=26.6
Q ss_pred cCChHHHHHHHHHcCCeEEEEcCCcHH----HHHHHHHhccc
Q 002671 720 QKGVPQCIDKLAQAGLKIWVLTGDKME----TAINIGFACSL 757 (894)
Q Consensus 720 r~~v~~~I~~L~~aGIkv~~lTGD~~~----ta~~ia~~~gl 757 (894)
++=+++.|..-...|=+|..+||+.+- ++..+|+...|
T Consensus 116 KevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i 157 (237)
T COG3700 116 KEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHI 157 (237)
T ss_pred HHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhccc
Confidence 445567788888889999999999874 33444444444
No 203
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=37.12 E-value=61 Score=33.86 Aligned_cols=47 Identities=17% Similarity=0.176 Sum_probs=35.5
Q ss_pred EeeeecccccCChHHHHHHHHHcCCeEEEEc---CCcHHHHHHHHHh-ccc
Q 002671 711 GATAVEDKLQKGVPQCIDKLAQAGLKIWVLT---GDKMETAINIGFA-CSL 757 (894)
Q Consensus 711 G~~~ieD~lr~~v~~~I~~L~~aGIkv~~lT---GD~~~ta~~ia~~-~gl 757 (894)
|++.-.+.+=+++.++|+.|+++|++++++| |...........+ .|+
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~ 57 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGV 57 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCC
Confidence 4555556666899999999999999999998 6766655554444 565
No 204
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=36.94 E-value=92 Score=24.78 Aligned_cols=40 Identities=23% Similarity=0.243 Sum_probs=29.3
Q ss_pred hhhccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002671 280 VMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIG 319 (894)
Q Consensus 280 ~~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~ 319 (894)
.+.|.-..+.+++.+.+.++.+...+.+++++.++++++.
T Consensus 23 ~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~ 62 (64)
T smart00831 23 YGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALL 62 (64)
T ss_pred hCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 3555555666678899999998888888777777776653
No 205
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=36.48 E-value=1e+02 Score=28.36 Aligned_cols=80 Identities=14% Similarity=0.191 Sum_probs=55.3
Q ss_pred HHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhCHHHHHHHHHHhhhcccEEEEeeeecccccCChHHHHHHHHH
Q 002671 653 EYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQ 732 (894)
Q Consensus 653 ~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~ 732 (894)
-+...|++|+.+... .+.++..+ .-.+.+-.++++-+......+.+++.++.|++
T Consensus 22 ~l~~~G~~vi~lG~~-vp~e~~~~------------------------~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~ 76 (122)
T cd02071 22 ALRDAGFEVIYTGLR-QTPEEIVE------------------------AAIQEDVDVIGLSSLSGGHMTLFPEVIELLRE 76 (122)
T ss_pred HHHHCCCEEEECCCC-CCHHHHHH------------------------HHHHcCCCEEEEcccchhhHHHHHHHHHHHHh
Confidence 467899999988854 33333211 12235667888888888888899999999999
Q ss_pred cCC-e-EEEEcCCcHHHHHHHHHhccc
Q 002671 733 AGL-K-IWVLTGDKMETAINIGFACSL 757 (894)
Q Consensus 733 aGI-k-v~~lTGD~~~ta~~ia~~~gl 757 (894)
+|. + .+++=|..+.--..-..+.|+
T Consensus 77 ~~~~~i~i~~GG~~~~~~~~~~~~~G~ 103 (122)
T cd02071 77 LGAGDILVVGGGIIPPEDYELLKEMGV 103 (122)
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHCCC
Confidence 976 3 356666655544566668886
No 206
>TIGR00612 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase. Chlamydial members of the family have a long insert. The family is largely restricted to Bacteria, where it is widely but not universally distributed. No homology can be detected between the GcpE family and other proteins.
Probab=34.42 E-value=6.7e+02 Score=27.65 Aligned_cols=100 Identities=21% Similarity=0.218 Sum_probs=61.4
Q ss_pred ccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhCHHHHHHHHHHhhhcccEEEEeeeecccccC
Q 002671 642 MYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQK 721 (894)
Q Consensus 642 ~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lr~ 721 (894)
...+...++++-+-..|++=++++.|.-+-...-+ .|.. +++..+.-|. ||+|-=-....-
T Consensus 148 amveSAl~~v~~le~~~F~diviS~KsSdv~~~i~---ayr~---------------la~~~dyPLH-lGVTEAG~~~~G 208 (346)
T TIGR00612 148 AMVQSALEEAAILEKLGFRNVVLSMKASDVAETVA---AYRL---------------LAERSDYPLH-LGVTEAGMGVKG 208 (346)
T ss_pred HHHHHHHHHHHHHHHCCCCcEEEEEEcCCHHHHHH---HHHH---------------HHhhCCCCce-eccccCCCCCCc
Confidence 35667778888899999999999999755433211 1211 1222222222 566643333322
Q ss_pred Ch--HHHHHHHHHcCC--eEE-EEcCCcHH---HHHHHHHhcccccc
Q 002671 722 GV--PQCIDKLAQAGL--KIW-VLTGDKME---TAINIGFACSLLRQ 760 (894)
Q Consensus 722 ~v--~~~I~~L~~aGI--kv~-~lTGD~~~---ta~~ia~~~gl~~~ 760 (894)
-+ .-.|-.|-..|| .+. =||+|+.+ .|..|-+++||-..
T Consensus 209 ~IKSaigig~LL~~GIGDTIRVSLT~dP~~EV~va~~IL~slglr~~ 255 (346)
T TIGR00612 209 IVKSSAGIGILLARGIGDTIRVSLTDDPTHEVPVAFEILQSLGLRAR 255 (346)
T ss_pred hhHHHHHHHHHHhhCCCCeEEEECCCCcHHHHHHHHHHHHHcCCCcC
Confidence 22 256788888888 333 37999864 56778888888654
No 207
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=33.12 E-value=58 Score=28.91 Aligned_cols=44 Identities=25% Similarity=0.375 Sum_probs=29.3
Q ss_pred chhhhccceEEEEeCCCeEEEeeccccccCcEEEeecCcccCceEEEee
Q 002671 130 QDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLS 178 (894)
Q Consensus 130 ~~~~~n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ 178 (894)
+........|.+ ||+.. .++.++++||+|.|.-|...- ...|+.
T Consensus 27 Ak~~~~~GrV~v---NG~~a-KpS~~VK~GD~l~i~~~~~~~-~v~Vl~ 70 (100)
T COG1188 27 AKEMIEGGRVKV---NGQRA-KPSKEVKVGDILTIRFGNKEF-TVKVLA 70 (100)
T ss_pred HHHHHHCCeEEE---CCEEc-ccccccCCCCEEEEEeCCcEE-EEEEEe
Confidence 334445566665 45555 899999999999999876542 244444
No 208
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=31.88 E-value=26 Score=29.92 Aligned_cols=25 Identities=24% Similarity=0.230 Sum_probs=17.5
Q ss_pred eeccccccCcEEEee-cCcccCceEE
Q 002671 151 KPWEKIQVGDIVKVE-KDQFFPADLL 175 (894)
Q Consensus 151 i~~~~L~vGDII~l~-~ge~iPaD~i 175 (894)
+.-.+|.+||.|.|. .||.||-=.-
T Consensus 45 i~~~~i~~Gd~V~V~raGdVIP~I~~ 70 (82)
T PF03120_consen 45 IKELDIRIGDTVLVTRAGDVIPKIVG 70 (82)
T ss_dssp HHHTT-BBT-EEEEEEETTTEEEEEE
T ss_pred HHHcCCCCCCEEEEEECCCccceEeE
Confidence 345799999999985 7999996333
No 209
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=31.62 E-value=20 Score=35.61 Aligned_cols=16 Identities=38% Similarity=0.509 Sum_probs=13.5
Q ss_pred EEecCCCceeecceEE
Q 002671 418 ILSDKTGTLTCNQMDF 433 (894)
Q Consensus 418 I~~DKTGTLT~n~m~~ 433 (894)
+|||.+||||.+.+.|
T Consensus 1 v~fD~DGTL~~~~~~f 16 (192)
T PF12710_consen 1 VIFDFDGTLTDSDSGF 16 (192)
T ss_dssp EEEESBTTTBSSHHHH
T ss_pred eEEecCcCeecCCCch
Confidence 6999999999998533
No 210
>PF12148 DUF3590: Protein of unknown function (DUF3590); InterPro: IPR021991 This domain is found in eukaryotes, and is typically between 83 and 97 amino acids in length. It is found in association with PF00097 from PFAM, PF02182 from PFAM, PF00628 from PFAM, PF00240 from PFAM. There are two conserved sequence motifs: RAR and NYN. The domain is part of the protein NIRF which has zinc finger and ubiquitinating domains. The function of this domain is likely to be mainly structural, however this has not been confirmed. ; PDB: 3DB4_A 3ASK_A 3DB3_A 2L3R_A.
Probab=31.23 E-value=34 Score=29.34 Aligned_cols=24 Identities=25% Similarity=0.492 Sum_probs=13.6
Q ss_pred EEEeeccccccCcEEEeecCcccC
Q 002671 148 FSYKPWEKIQVGDIVKVEKDQFFP 171 (894)
Q Consensus 148 ~~~i~~~~L~vGDII~l~~ge~iP 171 (894)
...++|.+|.||++|.|.-+-.-|
T Consensus 58 Rt~l~w~~L~VG~~VMvNYN~d~P 81 (85)
T PF12148_consen 58 RTILKWDELKVGQVVMVNYNVDEP 81 (85)
T ss_dssp -SBE-GGG--TT-EEEEEE-TTST
T ss_pred eEeccHHhCCcccEEEEecCCCCc
Confidence 345899999999999997554433
No 211
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=30.44 E-value=1.2e+03 Score=29.76 Aligned_cols=36 Identities=14% Similarity=0.015 Sum_probs=28.8
Q ss_pred CChHHHHHHHHHc-CCeEEEEcCCcHHHHHHHHHhcc
Q 002671 721 KGVPQCIDKLAQA-GLKIWVLTGDKMETAINIGFACS 756 (894)
Q Consensus 721 ~~v~~~I~~L~~a-GIkv~~lTGD~~~ta~~ia~~~g 756 (894)
+++.++++.|.+. +..|+|+||+...........++
T Consensus 625 p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~ 661 (934)
T PLN03064 625 PELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFD 661 (934)
T ss_pred HHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCC
Confidence 5677888888875 67999999999998887665543
No 212
>PRK08508 biotin synthase; Provisional
Probab=30.42 E-value=5.7e+02 Score=27.40 Aligned_cols=38 Identities=16% Similarity=0.094 Sum_probs=27.0
Q ss_pred hHHHHHHHHHcCC-eEE------------EEcCCcHHH---HHHHHHhcccccc
Q 002671 723 VPQCIDKLAQAGL-KIW------------VLTGDKMET---AINIGFACSLLRQ 760 (894)
Q Consensus 723 v~~~I~~L~~aGI-kv~------------~lTGD~~~t---a~~ia~~~gl~~~ 760 (894)
.++.+++|+++|+ .+. +.||...+- ++..|+++|+-..
T Consensus 101 ~~e~l~~Lk~aGld~~~~~lEt~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~ 154 (279)
T PRK08508 101 SVEQLKELKKAGIFSYNHNLETSKEFFPKICTTHTWEERFQTCENAKEAGLGLC 154 (279)
T ss_pred CHHHHHHHHHcCCCEEcccccchHHHhcCCCCCCCHHHHHHHHHHHHHcCCeec
Confidence 4899999999998 333 467765555 4456888997443
No 213
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=30.08 E-value=2.1e+02 Score=27.03 Aligned_cols=80 Identities=13% Similarity=0.149 Sum_probs=53.5
Q ss_pred HHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhCHHHHHHHHHHhhhcccEEEEeeeecccccCChHHHHHHHHH
Q 002671 653 EYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQ 732 (894)
Q Consensus 653 ~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~ 732 (894)
-+...|++|+-+....- .+++ ++ .-.|.+-.++|+-++-=.--+..+++++.|++
T Consensus 24 ~l~~~GfeVi~LG~~v~-~e~~---------------------v~---aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~ 78 (134)
T TIGR01501 24 AFTNAGFNVVNLGVLSP-QEEF---------------------IK---AAIETKADAILVSSLYGHGEIDCKGLRQKCDE 78 (134)
T ss_pred HHHHCCCEEEECCCCCC-HHHH---------------------HH---HHHHcCCCEEEEecccccCHHHHHHHHHHHHH
Confidence 45679999998885433 2222 11 22345777888888776666778999999999
Q ss_pred cCC--eEEEEcCCcH------HHHHHHHHhccc
Q 002671 733 AGL--KIWVLTGDKM------ETAINIGFACSL 757 (894)
Q Consensus 733 aGI--kv~~lTGD~~------~ta~~ia~~~gl 757 (894)
+|+ .+||+=|-.. .....-++++|+
T Consensus 79 ~gl~~~~vivGG~~vi~~~d~~~~~~~l~~~Gv 111 (134)
T TIGR01501 79 AGLEGILLYVGGNLVVGKQDFPDVEKRFKEMGF 111 (134)
T ss_pred CCCCCCEEEecCCcCcChhhhHHHHHHHHHcCC
Confidence 987 5677888421 122445788885
No 214
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=28.55 E-value=1.4e+03 Score=29.69 Aligned_cols=171 Identities=13% Similarity=0.135 Sum_probs=88.0
Q ss_pred HHHHHhhhHHHHHHHHHHHH-hcccCCCCCCchhhhhHHHHHHHHHHHHHHHHHHHhhchhhh-----cc--ceEEEEe-
Q 002671 73 ALFEQFNRVANIYFLIAALL-SVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDKEV-----NA--RKVSVHV- 143 (894)
Q Consensus 73 ~l~~qf~~~~n~~~l~~~il-~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~d~~r~k~~~~~-----n~--~~~~V~~- 143 (894)
.-|..+.++..+...++.++ .+.+.++..++.-++.++++..+--..+-+..++..+..+.- .+ ....+--
T Consensus 23 ~qf~~~~N~yfl~i~ilq~ip~~s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~~~n~~~~~v~~~~~~~~~i~~~ 102 (1057)
T TIGR01652 23 EQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDKEVNNRLTEVLEGHGQFVEIPWK 102 (1057)
T ss_pred HHHHHHhhHHHHHHHHHHcCCCcCCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHhHHHHhCcEEEEECCCCcEEEeeee
Confidence 34445555555555555443 555655555555555566666666666666666655543222 11 1111110
Q ss_pred --CCCeEEEeeccccccCcEEEeecCcccCceEEEeeecCCCCcEEEEecccCCCCc-ceeecccccC----CCCCchhh
Q 002671 144 --GNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETN-LKVKRAMEAT----SPLNEDEA 216 (894)
Q Consensus 144 --r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~ilL~ss~~~G~~~Vdes~LtGEs~-~~~K~~~~~~----~~~~~~~~ 216 (894)
+-|..+.+...|.+|-|++.+...+. .....++++.-+|....-+..-.-.+. .......... .-..+..+
T Consensus 103 ~l~~GDiv~l~~g~~iPaD~~ll~ss~~--~g~~~v~~s~l~GEs~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~ 180 (1057)
T TIGR01652 103 DLRVGDIVKVKKDERIPADLLLLSSSEP--DGVCYVETANLDGETNLKLRQALEETQKMLDEDDIKNFSGEIECEQPNAS 180 (1057)
T ss_pred cccCCCEEEEcCCCcccceEEEEeccCC--CceEEEEeeccCCeecceEeecchhhhccCChhhHhhceEEEEEcCCCCc
Confidence 45889999999999999999986553 112345555555654333221110000 0000000000 00112344
Q ss_pred hccceeEEEeeC----C-CCCceeEEEEEEEC-Ce
Q 002671 217 FKEFTGTVKCEN----P-NPSLYTFVGNIEYD-RE 245 (894)
Q Consensus 217 ~~~~~g~i~~e~----p-~~~~~~f~Gt~~~~-g~ 245 (894)
+..+.|++..+. | +.+...|.|+.+.+ |.
T Consensus 181 l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~ 215 (1057)
T TIGR01652 181 LYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDW 215 (1057)
T ss_pred ceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCe
Confidence 556888887654 1 34456788988887 44
No 215
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=28.41 E-value=3.3e+02 Score=28.53 Aligned_cols=38 Identities=18% Similarity=0.218 Sum_probs=30.3
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCcHHH----HHHHHHhcccc
Q 002671 721 KGVPQCIDKLAQAGLKIWVLTGDKMET----AINIGFACSLL 758 (894)
Q Consensus 721 ~~v~~~I~~L~~aGIkv~~lTGD~~~t----a~~ia~~~gl~ 758 (894)
+|+.|.++...+.|.+|.-+|-+..++ .+.--++.||-
T Consensus 125 pGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~ 166 (274)
T COG2503 125 PGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLP 166 (274)
T ss_pred ccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcc
Confidence 999999999999999999999998876 23334445553
No 216
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=28.40 E-value=1.8e+02 Score=26.43 Aligned_cols=80 Identities=18% Similarity=0.238 Sum_probs=54.2
Q ss_pred HHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhCHHHHHHHHHHhhhcccEEEEeeeecccccCChHHHHHHHHH
Q 002671 653 EYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQ 732 (894)
Q Consensus 653 ~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~ 732 (894)
-+...|++|+.+. ..++.+++.+. -.+.+-.++|+......--+.+++.++.+|+
T Consensus 22 ~l~~~G~~V~~lg-~~~~~~~l~~~------------------------~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~ 76 (119)
T cd02067 22 ALRDAGFEVIDLG-VDVPPEEIVEA------------------------AKEEDADAIGLSGLLTTHMTLMKEVIEELKE 76 (119)
T ss_pred HHHHCCCEEEECC-CCCCHHHHHHH------------------------HHHcCCCEEEEeccccccHHHHHHHHHHHHH
Confidence 4567999998777 33554443221 1235677888888867667899999999999
Q ss_pred cCC-eE-EEEcCCcHHHHHHHHHhccc
Q 002671 733 AGL-KI-WVLTGDKMETAINIGFACSL 757 (894)
Q Consensus 733 aGI-kv-~~lTGD~~~ta~~ia~~~gl 757 (894)
.+- ++ +++-|-.....-..+++.|.
T Consensus 77 ~~~~~~~i~vGG~~~~~~~~~~~~~G~ 103 (119)
T cd02067 77 AGLDDIPVLVGGAIVTRDFKFLKEIGV 103 (119)
T ss_pred cCCCCCeEEEECCCCChhHHHHHHcCC
Confidence 976 44 56777554433456777775
No 217
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=28.16 E-value=1e+02 Score=32.67 Aligned_cols=28 Identities=11% Similarity=0.055 Sum_probs=22.3
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCcHHHH
Q 002671 721 KGVPQCIDKLAQAGLKIWVLTGDKMETA 748 (894)
Q Consensus 721 ~~v~~~I~~L~~aGIkv~~lTGD~~~ta 748 (894)
++..++++.|+..+++++++|+.....+
T Consensus 123 ~~l~~a~~~L~~~~~~~~iatn~~~~~~ 150 (257)
T TIGR01458 123 QILNQAFRLLLDGAKPLLIAIGKGRYYK 150 (257)
T ss_pred HHHHHHHHHHHcCCCCEEEEeCCCCCCc
Confidence 5677889999988999999998665533
No 218
>PF13253 DUF4044: Protein of unknown function (DUF4044)
Probab=27.76 E-value=2e+02 Score=20.34 Aligned_cols=19 Identities=21% Similarity=0.427 Sum_probs=11.7
Q ss_pred CCCcchHHHHHHHHHHHHH
Q 002671 288 PSKRSGIEKKMDKIIFILF 306 (894)
Q Consensus 288 ~~k~s~~~~~~~~~~~~~~ 306 (894)
+.|+|.+|+...-++.++.
T Consensus 3 kkkKS~fekiT~v~v~lM~ 21 (35)
T PF13253_consen 3 KKKKSTFEKITMVVVWLML 21 (35)
T ss_pred CccccHHHHHHHHHHHHHH
Confidence 4567888877655544443
No 219
>TIGR00676 fadh2 5,10-methylenetetrahydrofolate reductase, prokaryotic form. This protein is an FAD-containing flavoprotein.
Probab=26.98 E-value=2.5e+02 Score=30.09 Aligned_cols=83 Identities=14% Similarity=0.221 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhCHHHHHHHHHHhh-hcccEEEEeeeecccccCCh
Q 002671 645 EATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMM-EKDLILVGATAVEDKLQKGV 723 (894)
Q Consensus 645 ~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~i-E~dl~llG~~~ieD~lr~~v 723 (894)
+.+.+.++.+...|---+.+++-... ..|...++...... +.++..+--+...|.=+.+.
T Consensus 15 ~~l~~~~~~l~~~~pd~isvT~~~~~-------------------~~~~~t~~~a~~l~~~~g~~~i~Hlt~r~~n~~~l 75 (272)
T TIGR00676 15 ENLWETVDRLSPLDPDFVSVTYGAGG-------------------STRDRTVRIVRRIKKETGIPTVPHLTCIGATREEI 75 (272)
T ss_pred HHHHHHHHHHhcCCCCEEEeccCCCC-------------------CcHHHHHHHHHHHHHhcCCCeeEEeeecCCCHHHH
Confidence 55666677776555555555554332 12333332222222 23677777777778777889
Q ss_pred HHHHHHHHHcCCe-EEEEcCCcHH
Q 002671 724 PQCIDKLAQAGLK-IWVLTGDKME 746 (894)
Q Consensus 724 ~~~I~~L~~aGIk-v~~lTGD~~~ 746 (894)
.+.+..++.+||+ +..+|||.+.
T Consensus 76 ~~~L~~~~~~Gi~nvL~l~GD~~~ 99 (272)
T TIGR00676 76 REILREYRELGIRHILALRGDPPK 99 (272)
T ss_pred HHHHHHHHHCCCCEEEEeCCCCCC
Confidence 9999999999995 5559999983
No 220
>cd06919 Asp_decarbox Aspartate alpha-decarboxylase or L-aspartate 1-decarboxylase, a pyruvoyl group-dependent decarboxylase in beta-alanine production. Decarboxylation of aspartate is the major route of beta-alanine production in bacteria, and is catalyzed by the enzyme L-aspartate decarboxylase (ADC), EC:4.1.1.11 which requires a pyruvoyl group for its activity. The pyruvoyl cofactor is covalently bound to the enzyme. The protein is synthesized as a proenzyme and cleaved via self-processing at Gly23-Ser24 to yield an alpha chain (C-terminal fragment) and beta chain (N-terminal fragment), and the pyruvoyl group. Beta-alanine is required for the biosynthesis of pantothenate, in which the enzyme plays a critical regulatory role. The active site of the tetrameric enzyme is located at the interface of two subunits, with a Lysine and a Histidine from the beta chain of one subunit forming the active site with residues from the alpha chain of the adjacent subunit. This alignment
Probab=26.58 E-value=99 Score=27.95 Aligned_cols=83 Identities=22% Similarity=0.356 Sum_probs=53.1
Q ss_pred CeeeecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEEEeecCCCCCceEEEEEEcCCCcEEEEE
Q 002671 546 NLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLC 625 (894)
Q Consensus 546 ~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~i~i~~~~~~~g~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~ 625 (894)
.+.|.++=-.+..|+++|.- ..|+.+.+..-++-.+..+-++..+.|.-.+..
T Consensus 18 ~L~YeGSitID~~Ll~aagi---------------------------~~~E~V~I~Nv~NG~Rf~TYvI~g~~gSg~I~l 70 (111)
T cd06919 18 DLNYEGSITIDEDLLEAAGI---------------------------LPYEKVLVVNVNNGARFETYVIPGERGSGVICL 70 (111)
T ss_pred ccccceeEEECHHHHHhcCC---------------------------CCCCEEEEEECCCCcEEEEEEEEcCCCCCEEEe
Confidence 56677777788888887653 233334444444444444445555555556666
Q ss_pred ccchhhhhHhhccCccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHH
Q 002671 626 KGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAW 677 (894)
Q Consensus 626 KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~ 677 (894)
-||. .++.+.|=|++++||-.++++|...|
T Consensus 71 NGAA----------------------Ar~~~~GD~vII~sy~~~~~~e~~~~ 100 (111)
T cd06919 71 NGAA----------------------ARLGQPGDRVIIMAYALMDEEEAEGH 100 (111)
T ss_pred CCHH----------------------HhcCCCCCEEEEEECccCCHHHHhcC
Confidence 6664 24567899999999999998875443
No 221
>TIGR00223 panD L-aspartate-alpha-decarboxylase. Members of this family are aspartate 1-decarboxylase, the enzyme that makes beta-alanine and C02 from aspartate. Beta-alanine is then used to make the vitamin pantothenate, from which coenzyme A is made. Aspartate 1-decarboxylase is synthesized as a proenzyme, then cleaved to an alpha (C-terminal) and beta (N-terminal) subunit with a pyruvoyl group.
Probab=25.62 E-value=1e+02 Score=28.53 Aligned_cols=84 Identities=17% Similarity=0.270 Sum_probs=53.8
Q ss_pred CCeeeecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEEEeecCCCCCceEEEEEEcCCCcEEEE
Q 002671 545 GNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLL 624 (894)
Q Consensus 545 ~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~i~i~~~~~~~g~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~ 624 (894)
..+.|.++=-.+..|+++|.-+ .|+.+.+..-++..+.-+.++..+.|.-.+.
T Consensus 18 a~L~Y~GSItID~~Lm~aagi~---------------------------p~E~V~V~Nv~NG~Rf~TYvI~G~~GSg~I~ 70 (126)
T TIGR00223 18 ANLNYEGSITIDEDLLDAAGIL---------------------------ENEKVDIVNVNNGKRFSTYAIAGKRGSRIIC 70 (126)
T ss_pred cccccceeEEECHHHHHhcCCC---------------------------CCCEEEEEECCCCcEEEEEEEEcCCCCCEEE
Confidence 3567877777888888876532 2333334444444444444455455555555
Q ss_pred EccchhhhhHhhccCccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHH
Q 002671 625 CKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAW 677 (894)
Q Consensus 625 ~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~ 677 (894)
.-||. .++.+.|=+++.+||-.++++|...|
T Consensus 71 lNGAA----------------------Arl~~~GD~VII~sy~~~~~~e~~~~ 101 (126)
T TIGR00223 71 VNGAA----------------------ARCVSVGDIVIIASYVTMPDEEARTH 101 (126)
T ss_pred eCCHH----------------------HhcCCCCCEEEEEECCcCCHHHHhcC
Confidence 66663 24567899999999999999876554
No 222
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=25.62 E-value=1.8e+02 Score=28.45 Aligned_cols=31 Identities=23% Similarity=0.374 Sum_probs=25.3
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCcHHHHHHH
Q 002671 721 KGVPQCIDKLAQAGLKIWVLTGDKMETAINI 751 (894)
Q Consensus 721 ~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~i 751 (894)
+.|.++|+..++.|++|+.+||++--.-..+
T Consensus 123 ~nVl~Ai~~Ak~~gm~vI~ltG~~GG~~~~~ 153 (176)
T COG0279 123 KNVLKAIEAAKEKGMTVIALTGKDGGKLAGL 153 (176)
T ss_pred HHHHHHHHHHHHcCCEEEEEecCCCcccccc
Confidence 5677999999999999999999976544333
No 223
>PRK05449 aspartate alpha-decarboxylase; Provisional
Probab=24.81 E-value=1.1e+02 Score=28.37 Aligned_cols=83 Identities=22% Similarity=0.306 Sum_probs=53.7
Q ss_pred CeeeecCChhHHHHHHHHHHCCcEEEEEcCCeEEEEecCCCCCCCceeEEEEEEeecCCCCCceEEEEEEcCCCcEEEEE
Q 002671 546 NLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLC 625 (894)
Q Consensus 546 ~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~i~i~~~~~~~g~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~ 625 (894)
.+.|.++=-.+..|+++|.-. .|+.+.+..-++-.+..+.++..+.|.-.+..
T Consensus 19 ~L~Y~GSitID~~Ll~aagi~---------------------------p~E~V~V~Nv~NG~Rf~TYvI~g~~GSg~I~l 71 (126)
T PRK05449 19 DLNYEGSITIDEDLLDAAGIL---------------------------ENEKVQIVNVNNGARFETYVIAGERGSGVICL 71 (126)
T ss_pred ccccceeEEECHHHHHhcCCC---------------------------CCCEEEEEECCCCcEEEEEEEEcCCCCCEEEe
Confidence 567877777888888876532 23333344444444444445555555556666
Q ss_pred ccchhhhhHhhccCccccHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHH
Q 002671 626 KGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAW 677 (894)
Q Consensus 626 KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~ 677 (894)
-||. .++.+-|=|++.+||-.++++|...|
T Consensus 72 NGAA----------------------Ar~~~~GD~vII~ay~~~~~~e~~~~ 101 (126)
T PRK05449 72 NGAA----------------------ARLVQVGDLVIIAAYAQMDEEEAKTH 101 (126)
T ss_pred CCHH----------------------HhcCCCCCEEEEEECccCCHHHHhcC
Confidence 6664 24567899999999999999876554
No 224
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=24.06 E-value=5.6e+02 Score=23.42 Aligned_cols=95 Identities=13% Similarity=0.064 Sum_probs=47.6
Q ss_pred HHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhCHHHHHHHHHHhhhcccEEEEeeeecccccCChHH
Q 002671 646 ATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQ 725 (894)
Q Consensus 646 ~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lr~~v~~ 725 (894)
...+.++.+...|+++.+++-+......+. |.. .++.....+.-...+.-... ...+|...-
T Consensus 29 ~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~-~~~---------------~~~~~l~~~~l~~~~~~~~~--~~~KP~~~~ 90 (132)
T TIGR01662 29 EVPDALAELKEAGYKVVIVTNQSGIGRGKF-SSG---------------RVARRLEELGVPIDVLYACP--HCRKPKPGM 90 (132)
T ss_pred CHHHHHHHHHHCCCEEEEEECCccccccHH-HHH---------------HHHHHHHHCCCCEEEEEECC--CCCCCChHH
Confidence 455677888899999988886542211110 111 11111122211111221222 233443322
Q ss_pred HHHHHHHc-CC--eEEEEcCCcHHHHHHHHHhcccc
Q 002671 726 CIDKLAQA-GL--KIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 726 ~I~~L~~a-GI--kv~~lTGD~~~ta~~ia~~~gl~ 758 (894)
....+++. ++ .=.+.=||+...-+..|+++|+.
T Consensus 91 ~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 91 FLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred HHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 23334444 36 33666799767788899999984
No 225
>COG1533 SplB DNA repair photolyase [DNA replication, recombination, and repair]
Probab=23.93 E-value=3.2e+02 Score=29.68 Aligned_cols=89 Identities=15% Similarity=0.265 Sum_probs=55.1
Q ss_pred HHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhCHHHHHHHHHHhhhcccEEEEeeeeccc------cc
Q 002671 647 TTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDK------LQ 720 (894)
Q Consensus 647 ~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~------lr 720 (894)
+...++-+...|.++....+-.+-..+.+ .+.+.-+.++.-+|++..-+. +-
T Consensus 105 tR~ilei~~~~~~~v~I~TKS~lv~RDld----------------------~l~~~~~~~~v~V~~Sitt~d~~l~k~~E 162 (297)
T COG1533 105 TRKILEILLKYGFPVSIVTKSALVLRDLD----------------------LLLELAERGKVRVAVSITTLDEELAKILE 162 (297)
T ss_pred HHHHHHHHHHcCCcEEEEECCcchhhhHH----------------------HHHhhhhccceEEEEEeecCcHHHHHhcC
Confidence 44455666778999988886655333222 122222356667777776643 55
Q ss_pred CChH------HHHHHHHHcCCeEEEE--------cCCcHHHHHHHHHhccc
Q 002671 721 KGVP------QCIDKLAQAGLKIWVL--------TGDKMETAINIGFACSL 757 (894)
Q Consensus 721 ~~v~------~~I~~L~~aGIkv~~l--------TGD~~~ta~~ia~~~gl 757 (894)
|.++ ++++.|.++||++|+. |.++.+....-|.+.|.
T Consensus 163 P~apsp~~Ri~al~~l~eaGi~~~v~v~PIiP~~~d~e~e~~l~~~~~ag~ 213 (297)
T COG1533 163 PRAPSPEERLEALKELSEAGIPVGLFVAPIIPGLNDEELERILEAAAEAGA 213 (297)
T ss_pred CCCcCHHHHHHHHHHHHHCCCeEEEEEecccCCCChHHHHHHHHHHHHcCC
Confidence 6666 9999999999999974 22234444555555554
No 226
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=23.09 E-value=50 Score=25.72 Aligned_cols=13 Identities=23% Similarity=0.572 Sum_probs=11.0
Q ss_pred ccCcEEEeecCcc
Q 002671 157 QVGDIVKVEKDQF 169 (894)
Q Consensus 157 ~vGDII~l~~ge~ 169 (894)
.+||||+|+.|-.
T Consensus 2 ~~GDvV~LKSGGp 14 (53)
T PF09926_consen 2 KIGDVVQLKSGGP 14 (53)
T ss_pred CCCCEEEEccCCC
Confidence 6899999998864
No 227
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=22.77 E-value=1.1e+02 Score=33.80 Aligned_cols=37 Identities=19% Similarity=0.223 Sum_probs=33.8
Q ss_pred cCChHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHhc-c
Q 002671 720 QKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFAC-S 756 (894)
Q Consensus 720 r~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~-g 756 (894)
-++++++++.|+++|+++.++|+-....+..+...+ |
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 379999999999999999999999999999888875 5
No 228
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=22.74 E-value=70 Score=31.17 Aligned_cols=22 Identities=36% Similarity=0.700 Sum_probs=20.7
Q ss_pred CChHHHHHHHHHcCCeEEEEcC
Q 002671 721 KGVPQCIDKLAQAGLKIWVLTG 742 (894)
Q Consensus 721 ~~v~~~I~~L~~aGIkv~~lTG 742 (894)
++|+++|++|.+.|.+++|+|-
T Consensus 32 ~~v~~~L~~l~~~Gy~IvIvTN 53 (159)
T PF08645_consen 32 PGVPEALRELHKKGYKIVIVTN 53 (159)
T ss_dssp TTHHHHHHHHHHTTEEEEEEEE
T ss_pred hhHHHHHHHHHhcCCeEEEEeC
Confidence 5799999999999999999995
No 229
>PF02219 MTHFR: Methylenetetrahydrofolate reductase; InterPro: IPR003171 This family includes the 5,10-methylenetetrahydrofolate reductase 1.7.99.5 from EC from bacteria and methylenetetrahydrofolate reductase 1.5.1.20 from EC from eukaryotes. The structure for this domain is known [] to be a TIM barrel.; GO: 0004489 methylenetetrahydrofolate reductase (NADPH) activity, 0006555 methionine metabolic process, 0055114 oxidation-reduction process; PDB: 3IJD_B 1B5T_B 3FSU_C 1ZPT_C 2FMO_B 3FST_C 2FMN_C 1ZP3_A 1ZP4_B 1ZRQ_B ....
Probab=22.57 E-value=2.3e+02 Score=30.57 Aligned_cols=44 Identities=18% Similarity=0.237 Sum_probs=33.9
Q ss_pred hcccEEEEeeeecccccCChHHHHHHHHHcCC-eEEEEcCCcHHH
Q 002671 704 EKDLILVGATAVEDKLQKGVPQCIDKLAQAGL-KIWVLTGDKMET 747 (894)
Q Consensus 704 E~dl~llG~~~ieD~lr~~v~~~I~~L~~aGI-kv~~lTGD~~~t 747 (894)
+.++..+--+...|.=+.+...-+..++..|| .|.++|||.+..
T Consensus 68 ~~g~~~i~Hlt~rd~n~~~l~~~L~~~~~~Gi~niL~l~GD~~~~ 112 (287)
T PF02219_consen 68 ETGIEPIPHLTCRDRNREALQSDLLGAHALGIRNILALTGDPPKG 112 (287)
T ss_dssp HTT--EEEEEESTTSBHHHHHHHHHHHHHTT--EEEEESS-TSTT
T ss_pred HhCCceEEeecccCCCHHHHHHHHHHHHHcCCCeEEEecCCCCCC
Confidence 35788888888889888888899999999999 789999997643
No 230
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.
Probab=22.13 E-value=1.3e+02 Score=28.91 Aligned_cols=49 Identities=14% Similarity=0.067 Sum_probs=34.0
Q ss_pred EEEEeeeecccccCChHHHHHHHHHcCCeEEEEcCCcHH-HHHHHHHhccc
Q 002671 708 ILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKME-TAINIGFACSL 757 (894)
Q Consensus 708 ~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~~lTGD~~~-ta~~ia~~~gl 757 (894)
..+-++|=| -..+++.+.++.+++.|+++++-||-..+ .-..++..+..
T Consensus 63 ~gVt~SGGE-l~~~~l~~ll~~lk~~Gl~i~l~Tg~~~~~~~~~il~~iD~ 112 (147)
T TIGR02826 63 SCVLFLGGE-WNREALLSLLKIFKEKGLKTCLYTGLEPKDIPLELVQHLDY 112 (147)
T ss_pred CEEEEechh-cCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHhCCE
Confidence 456667777 34466889999999999999999995442 23344444443
No 231
>PTZ00413 lipoate synthase; Provisional
Probab=22.11 E-value=5.2e+02 Score=29.15 Aligned_cols=54 Identities=24% Similarity=0.330 Sum_probs=39.4
Q ss_pred hcccEEEEeeee-cccccCC----hHHHHHHHHHc--CCeEEEEcCCc--HHHHHHHHHhccc
Q 002671 704 EKDLILVGATAV-EDKLQKG----VPQCIDKLAQA--GLKIWVLTGDK--METAINIGFACSL 757 (894)
Q Consensus 704 E~dl~llG~~~i-eD~lr~~----v~~~I~~L~~a--GIkv~~lTGD~--~~ta~~ia~~~gl 757 (894)
+.++.+.=++.. +|.|.++ ..++|+.+++. ++.|-+++||- ..-+...-.+.|+
T Consensus 191 ~~Gl~~~VVTSv~RDDL~D~ga~~~a~~I~~Ir~~~p~~~IevligDf~g~~e~l~~L~eAG~ 253 (398)
T PTZ00413 191 EMGVDYIVMTMVDRDDLPDGGASHVARCVELIKESNPELLLEALVGDFHGDLKSVEKLANSPL 253 (398)
T ss_pred HcCCCEEEEEEEcCCCCChhhHHHHHHHHHHHHccCCCCeEEEcCCccccCHHHHHHHHhcCC
Confidence 456777777777 5888665 45899999985 79999999987 3445555556665
No 232
>COG3981 Predicted acetyltransferase [General function prediction only]
Probab=21.88 E-value=1.6e+02 Score=28.96 Aligned_cols=116 Identities=16% Similarity=0.228 Sum_probs=72.1
Q ss_pred cHHHHHHHHHHHHhcCCeEEEEEEEe-CCHHHHHHHHHHHHHHHhhh--hhCHHHHHHHHHHhhhcccEEEEeeeecccc
Q 002671 643 YEEATTKLLNEYGEAGLRTLALAYKQ-LDESEYSAWNSEFQKAKSSI--GADREATLEHVSDMMEKDLILVGATAVEDKL 719 (894)
Q Consensus 643 ~~~~~~~~l~~~~~~Glr~l~~A~k~-l~~~e~~~~~~~~~~a~~~~--~~~r~~~l~~~~~~iE~dl~llG~~~ieD~l 719 (894)
..+.+.+..++|...|.+....+++. .+.+.|.+|.+......... ..+.- -..-+-.+..|-.++|++.++-.|
T Consensus 13 ~k~a~le~~~e~~~~~~~~~~~~~~~~~~~~~fed~L~~~~~~~~~~~~~~g~V--~~~~y~~v~~d~~ivG~i~lRh~L 90 (174)
T COG3981 13 DKDAFLEMKKEFLTDGSTEAGAAWKADYEQEDFEDWLEDLTRQEPGNNLPEGWV--PASTYWAVDEDGQIVGFINLRHQL 90 (174)
T ss_pred hHHHHHHHHHhhhhcCCcccCceeecccccccHHHHHHHHhccCCCcCCCCCce--eceeEEEEecCCcEEEEEEeeeec
Confidence 45667777888888888777655554 34578999987632221111 00000 000000122377899999998666
Q ss_pred cCCh-------------------------HHHHHHHHHcCCeEEEEcCCcH--HHHHHHHHhcccccc
Q 002671 720 QKGV-------------------------PQCIDKLAQAGLKIWVLTGDKM--ETAINIGFACSLLRQ 760 (894)
Q Consensus 720 r~~v-------------------------~~~I~~L~~aGIkv~~lTGD~~--~ta~~ia~~~gl~~~ 760 (894)
.+.. +.+++.+++.||+-+++|-|+- .+...|-...|++..
T Consensus 91 n~~ll~~gGHIGY~VrPseR~KGYA~emLkl~L~~ar~lgi~~Vlvtcd~dN~ASrkvI~~NGGile~ 158 (174)
T COG3981 91 NDFLLEEGGHIGYSVRPSERRKGYAKEMLKLALEKARELGIKKVLVTCDKDNIASRKVIEANGGILEN 158 (174)
T ss_pred chHHHhcCCcccceeChhhhccCHHHHHHHHHHHHHHHcCCCeEEEEeCCCCchhhHHHHhcCCEEeE
Confidence 5432 2588999999999999987654 455667777777753
No 233
>PRK10053 hypothetical protein; Provisional
Probab=21.87 E-value=71 Score=29.94 Aligned_cols=30 Identities=20% Similarity=0.297 Sum_probs=24.7
Q ss_pred CCCeEEeccccccccccceEEEecCCCcee
Q 002671 398 GIPAQARTSNLNEELGQVDTILSDKTGTLT 427 (894)
Q Consensus 398 ~~~~~vr~~~~~e~Lg~v~~I~~DKTGTLT 427 (894)
+-.-+.-..++...||.=.|+|.|+||+++
T Consensus 60 Dd~~V~L~G~Iv~~lg~d~Y~F~D~tG~I~ 89 (130)
T PRK10053 60 DGATVSLRGNLIDHKGDDRYVFRDKSGEIN 89 (130)
T ss_pred CCCeEEEEEEEEEEeCCceEEEECCCCcEE
Confidence 333455678899999999999999999976
No 234
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=21.58 E-value=2.2e+02 Score=34.92 Aligned_cols=79 Identities=18% Similarity=0.306 Sum_probs=52.6
Q ss_pred cHHHHHHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhCHHHHHHHHHHhhhcccEEEEeeeecccccCC
Q 002671 643 YEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKG 722 (894)
Q Consensus 643 ~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lr~~ 722 (894)
.+....+.++.+...|++++.+. -|++..-+.++.++ |+--+.=.+.|+
T Consensus 538 ~R~~a~~aI~~L~~~Gi~~~mLT------------------------GDn~~~A~~iA~~l-------GId~v~AellPe 586 (713)
T COG2217 538 LRPDAKEAIAALKALGIKVVMLT------------------------GDNRRTAEAIAKEL-------GIDEVRAELLPE 586 (713)
T ss_pred CChhHHHHHHHHHHCCCeEEEEc------------------------CCCHHHHHHHHHHc-------ChHhheccCCcH
Confidence 56677888999999999988877 34444444444433 443333333343
Q ss_pred hH-HHHHHHHHcCCeEEEEcCCcHHHHHHHHH
Q 002671 723 VP-QCIDKLAQAGLKIWVLTGDKMETAINIGF 753 (894)
Q Consensus 723 v~-~~I~~L~~aGIkv~~lTGD~~~ta~~ia~ 753 (894)
=+ +.|++|++.|.+|.| =||-..-|-+.|.
T Consensus 587 dK~~~V~~l~~~g~~Vam-VGDGINDAPALA~ 617 (713)
T COG2217 587 DKAEIVRELQAEGRKVAM-VGDGINDAPALAA 617 (713)
T ss_pred HHHHHHHHHHhcCCEEEE-EeCCchhHHHHhh
Confidence 33 899999999966655 5988877766554
No 235
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=21.13 E-value=73 Score=31.93 Aligned_cols=29 Identities=24% Similarity=0.330 Sum_probs=23.2
Q ss_pred cccCChHHHHHHHHHcCCeEEEEcCCcHH
Q 002671 718 KLQKGVPQCIDKLAQAGLKIWVLTGDKME 746 (894)
Q Consensus 718 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ 746 (894)
++-+|+.|++++|.+.|..++++|+....
T Consensus 73 ~p~~gA~e~l~~L~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 73 PPIPGAVEALKKLRDKGHEIVIITARPPE 101 (191)
T ss_dssp -B-TTHHHHHHHHHTSTTEEEEEEE-SSS
T ss_pred CccHHHHHHHHHHHHcCCcEEEEEecCcc
Confidence 45599999999999999999999888654
No 236
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=20.99 E-value=2.9e+02 Score=35.04 Aligned_cols=24 Identities=17% Similarity=0.167 Sum_probs=20.0
Q ss_pred cHHHHHHHHHHHHhcCCeEEEEEE
Q 002671 643 YEEATTKLLNEYGEAGLRTLALAY 666 (894)
Q Consensus 643 ~~~~~~~~l~~~~~~Glr~l~~A~ 666 (894)
.++...+.++.+.+.|.|+..+.-
T Consensus 516 ~R~~~~~aI~~l~~aGI~vvmiTG 539 (867)
T TIGR01524 516 PKESTKEAIAALFKNGINVKVLTG 539 (867)
T ss_pred CchhHHHHHHHHHHCCCEEEEEcC
Confidence 567778888999999999988874
No 237
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=20.80 E-value=1.7e+02 Score=24.73 Aligned_cols=46 Identities=22% Similarity=0.287 Sum_probs=34.3
Q ss_pred eeeecccccCChHHHHHHHHHcCCeEEE-EcCCcHHHHHHHHHhccc
Q 002671 712 ATAVEDKLQKGVPQCIDKLAQAGLKIWV-LTGDKMETAINIGFACSL 757 (894)
Q Consensus 712 ~~~ieD~lr~~v~~~I~~L~~aGIkv~~-lTGD~~~ta~~ia~~~gl 757 (894)
++.+.+...+.+.+..+.|+++|+++-+ ..+.+......-|...|+
T Consensus 6 ii~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~ 52 (91)
T cd00860 6 VIPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKI 52 (91)
T ss_pred EEeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCC
Confidence 3444566777888889999999999988 566666666777777775
No 238
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=20.72 E-value=3.7e+02 Score=28.95 Aligned_cols=53 Identities=4% Similarity=-0.068 Sum_probs=42.0
Q ss_pred cccEEEEeeeecccccCCh---HHHHHHHHHcCCeEEEE-cCCcHHHHHHHHHhccc
Q 002671 705 KDLILVGATAVEDKLQKGV---PQCIDKLAQAGLKIWVL-TGDKMETAINIGFACSL 757 (894)
Q Consensus 705 ~dl~llG~~~ieD~lr~~v---~~~I~~L~~aGIkv~~l-TGD~~~ta~~ia~~~gl 757 (894)
-+|..+|++.+...-.+.. .+.++.+++.|+++++. .+-+...+..+|+++|+
T Consensus 194 yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~ia~~~gv 250 (287)
T cd01137 194 YGLKEAYLWPINTEEEGTPKQVATLIEQVKKEKVPAVFVESTVNDRLMKQVAKETGA 250 (287)
T ss_pred cCCeEeecccCCCCCCCCHHHHHHHHHHHHHhCCCEEEEeCCCChHHHHHHHHHhCC
Confidence 4788888888765555554 58888999999997765 66677788999999997
No 239
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=20.68 E-value=1.2e+02 Score=24.58 Aligned_cols=37 Identities=16% Similarity=0.203 Sum_probs=29.0
Q ss_pred hhhccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 002671 280 VMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLIS 316 (894)
Q Consensus 280 ~~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~ 316 (894)
.+.|.-..+.+++.+...++.+...+.+++++.++++
T Consensus 33 ~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 33 YGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp HSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred cccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 4666667778889999999999888887777776653
No 240
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=20.51 E-value=2e+02 Score=25.04 Aligned_cols=28 Identities=18% Similarity=0.354 Sum_probs=20.9
Q ss_pred eeeecccccCChHHHHHHHHHcCC-eEEE
Q 002671 712 ATAVEDKLQKGVPQCIDKLAQAGL-KIWV 739 (894)
Q Consensus 712 ~~~ieD~lr~~v~~~I~~L~~aGI-kv~~ 739 (894)
.+++.....|.+.++++.|++.|+ +|++
T Consensus 36 ~~a~~~~~~P~i~~~l~~l~~~g~~~vvv 64 (101)
T cd03409 36 YVGFQSGLGPDTEEAIRELAEEGYQRVVI 64 (101)
T ss_pred EEEEECCCCCCHHHHHHHHHHcCCCeEEE
Confidence 344445468999999999999998 4444
No 241
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=20.50 E-value=2.5e+02 Score=26.36 Aligned_cols=81 Identities=17% Similarity=0.166 Sum_probs=56.1
Q ss_pred HHHhcCCeEEEEEEEeCCHHHHHHHHHHHHHHHhhhhhCHHHHHHHHHHhhhcccEEEEeeeecccccCChHHHHHHHHH
Q 002671 653 EYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQ 732 (894)
Q Consensus 653 ~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lr~~v~~~I~~L~~ 732 (894)
-|...|+.|+-.... .+.+++- ..-.|.+-.++|+-++-..--+.+++.++.|++
T Consensus 25 ~l~~~GfeVi~lg~~-~s~e~~v------------------------~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~ 79 (132)
T TIGR00640 25 AYADLGFDVDVGPLF-QTPEEIA------------------------RQAVEADVHVVGVSSLAGGHLTLVPALRKELDK 79 (132)
T ss_pred HHHhCCcEEEECCCC-CCHHHHH------------------------HHHHHcCCCEEEEcCchhhhHHHHHHHHHHHHh
Confidence 467899999987754 2333321 122356888999999998888999999999999
Q ss_pred cCC-eE-EEEcCCcHHHHHHHHHhcccc
Q 002671 733 AGL-KI-WVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 733 aGI-kv-~~lTGD~~~ta~~ia~~~gl~ 758 (894)
+|. .+ +|+=|-.+..-..-.+++|+.
T Consensus 80 ~g~~~i~vivGG~~~~~~~~~l~~~Gvd 107 (132)
T TIGR00640 80 LGRPDILVVVGGVIPPQDFDELKEMGVA 107 (132)
T ss_pred cCCCCCEEEEeCCCChHhHHHHHHCCCC
Confidence 986 44 455444444445557778873
No 242
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=20.37 E-value=1.2e+02 Score=27.82 Aligned_cols=25 Identities=16% Similarity=0.255 Sum_probs=22.3
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCcH
Q 002671 721 KGVPQCIDKLAQAGLKIWVLTGDKM 745 (894)
Q Consensus 721 ~~v~~~I~~L~~aGIkv~~lTGD~~ 745 (894)
+++.++++.+++.|++++.+|++..
T Consensus 57 ~e~i~~~~~a~~~g~~iI~IT~~~~ 81 (119)
T cd05017 57 EETLSAVEQAKERGAKIVAITSGGK 81 (119)
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCch
Confidence 5778899999999999999999874
Done!