Query 002671
Match_columns 894
No_of_seqs 248 out of 2168
Neff 8.5
Searched_HMMs 29240
Date Tue Mar 26 21:06:28 2013
Command hhsearch -i /local_scratch/syshi/lefta3m2/002671.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H2_72-76//hhsearch_pdb/002671hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2zxe_A Na, K-ATPase alpha subu 1.0 1 1 806.5 40.1 637 48-887 74-740 (1028)
2 3ixz_A Potassium-transporting 1.0 1 1 791.4 54.2 638 48-887 79-745 (1034)
3 3ar4_A Sarcoplasmic/endoplasmi 1.0 1 1 790.6 49.3 665 47-892 30-725 (995)
4 1mhs_A Proton pump, plasma mem 1.0 1 1 738.7 30.0 554 48-893 94-656 (920)
5 3b8c_A ATPase 2, plasma membra 1.0 1 1 735.1 -9.2 559 47-888 38-607 (885)
6 3rfu_A Copper efflux ATPase; a 1.0 1 1 561.2 38.4 448 105-888 187-643 (736)
7 3j09_A COPA, copper-exporting 1.0 1 1 554.5 38.0 437 109-887 177-622 (723)
8 3j08_A COPA, copper-exporting 1.0 1 1 549.6 36.0 437 109-887 99-544 (645)
9 2yj3_A Copper-transporting ATP 1.0 1 1 189.9 0.0 101 706-887 124-224 (263)
10 3a1c_A Probable copper-exporti 1.0 1 1 156.7 24.7 238 397-888 14-251 (287)
No 1
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=1.00 E-value=1 Score=806.53 Aligned_cols=637 Identities=22% Similarity=0.261 Sum_probs=493.8
Q ss_pred CCCCCCCCCCEEECCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--C---C----CCCCHHHHHHHHHHHHHH
Q ss_conf 66888899970005776-314335999999965679999999998821237--8---8----887301154789999999
Q 002671 48 KKRPLKYCTNYISTTKY-NFFSYFPKALFEQFNRVANIYFLIAALLSVTPL--S---P----FSPVSMLLPLAIVVGVSM 117 (894)
Q Consensus 48 ~~~~~~yg~N~i~~~ky-~~~~flp~~l~~qf~~~~n~~fl~i~il~~~~~--~---~----~~~~~~~~~l~~v~~is~ 117 (894)
..|+.+||.|.+..++. ++| +.|++||..+++++++++++++++.. . . ...+...+++++++++++
T Consensus 74 ~~r~~~~G~N~l~~~~~~~~~----~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~ 149 (1028)
T 2zxe_A 74 KEILARDGPNSLTPPPTTPEW----IKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTG 149 (1028)
T ss_dssp HHHHHHHCCSCCCCCCCCCHH----HHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCCCCCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 999986699979999999899----9999999708999999999999999875113456665200799989898888999
Q ss_pred HHHHHHHHHHHHCHHHH---CCCEEEEEECCCEEEEEECCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCEEEEECCCC
Q ss_conf 89999999984003654---041389995797199952124644829995049603850999620389970899700468
Q 002671 118 AKEALEDWRRFMQDKEV---NARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLD 194 (894)
Q Consensus 118 ~~~~~~d~~r~k~~~~~---n~~~~~V~~r~g~~~~i~~~dL~vGDII~l~~ge~iPaD~iiL~ss~~~G~~~Vdes~Lt 194 (894)
+.+++++++..++.+.+ ...+++|+ |||++++|++++|+|||||.|++||.||||++||++++ |+||||+||
T Consensus 150 ~~~~~qe~ka~~~~~~L~~l~~~~a~V~-Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~----~~VdeS~LT 224 (1028)
T 2zxe_A 150 CFSYYQEAKSSRIMDSFKNMVPQQALVI-RDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHG----CKVDNSSLT 224 (1028)
T ss_dssp HHHHHHTCCCCCHHHHHHTTSCSEEEEE-ETTEEEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEEE----EEEECHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCEEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEECEEEEEEECC----EEEECCCCC
T ss_conf 9999999999999999885278726999-89999999888978677799899798412289996085----899867567
Q ss_pred CCCCCEEECCCCCCCCCCCHHHHCCCEEEEEEECCCCCCEEEEEEEEECCEEEECCCCCEEECCEEEECCCEEEEEEEEE
Q ss_conf 98862663144447989944443036069995279999405799999889031059997263050751489499999984
Q 002671 195 GETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFT 274 (894)
Q Consensus 195 GEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~~~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~giVv~t 274 (894)
|||.|+.|.+.+.. ..+++..|++++||.+.+ ++++|+|++|
T Consensus 225 GES~pv~K~~~~~~-------------------------------------~~~~~~~n~v~~GT~v~~-G~~~~~V~~t 266 (1028)
T 2zxe_A 225 GESEPQTRSPEFSS-------------------------------------ENPLETRNIAFFSTNCVE-GTARGVVVYT 266 (1028)
T ss_dssp SCCSCEECCSSCCC-------------------------------------SSTTTCSSEECTTCEEEE-EEEEEEEEEC
T ss_pred CCCCCEECCCCCCC-------------------------------------CCCCCCCCEEEECCEEEC-CEEEEEEEEE
T ss_conf 88763443467788-------------------------------------884453354873746970-1699999984
Q ss_pred CCCCHHHH---CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 36301010---368999976558899989999999999999999999775220256897322478888643599998655
Q 002671 275 GHDSKVMQ---NATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVP 351 (894)
Q Consensus 275 G~~Tk~~~---~~~~~~~k~s~l~~~~~~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 351 (894)
|.+|.+++ +...++.+++++++.+++++.+++.+.++++++.++++.+.. . .|+
T Consensus 267 G~~T~~g~i~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~~~-~----~~~------------------ 323 (1028)
T 2zxe_A 267 GDRTVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLILG-Y----SWL------------------ 323 (1028)
T ss_dssp GGGSHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-C----CHH------------------
T ss_pred CCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-C----CHH------------------
T ss_conf 51439889998603788788928999999999999999999999999999736-7----699------------------
Q ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCEEECCE
Q ss_conf 89899999998601232202677999999999988301235446899971784264100012405998649883021102
Q 002671 352 GLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQM 431 (894)
Q Consensus 352 ~~~~~~~~i~l~~~~iP~sL~v~i~i~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~e~LG~v~~I~~DKTGTLT~n~m 431 (894)
..+.+++.+++.+||++||++++++..+++.++ +++++++|+++++|+||++++||||||||||+|+|
T Consensus 324 --~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~m----------ak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m 391 (1028)
T 2zxe_A 324 --EAVIFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRM 391 (1028)
T ss_dssp --HHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSC
T ss_pred --HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH----------HHCCCEECCCHHHHHHCCCEEEECCCCCCCCCCEE
T ss_conf --999999999999747417999999999999998----------55891644456766414762995168888887738
Q ss_pred EEEEEEECCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 79999993830378960789999986210125654432100147999731010000369998632346897435500016
Q 002671 432 DFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMD 511 (894)
Q Consensus 432 ~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~d~~~~~ 511 (894)
.|.++++++..|.....+ . ..+.
T Consensus 392 ~v~~~~~~~~~~~~~~~~-----------------------------~-------------------~~~~--------- 414 (1028)
T 2zxe_A 392 TVAHMWFDNQIHEADTTE-----------------------------N-------------------QSGA--------- 414 (1028)
T ss_dssp EEEEEEETTEEEECCCCT-----------------------------T-------------------CCSC---------
T ss_pred EEEEEEECCEEEECCCCC-----------------------------C-------------------CCCC---------
T ss_conf 999999898465136777-----------------------------7-------------------6554---------
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCC--EEEECCCHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCC
Q ss_conf 67888998267999999983103046113589997--3664189619999999998895999773985899941899898
Q 002671 512 GNWLKEPNVDTLLLFFRILAICHTAIPELNEETGN--LTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQ 589 (894)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~l~lC~t~~~~~~~~~~~--~~y~~~sp~e~Al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~ 589 (894)
..+..+.....++.++++||++..+...+..- ..+..++|+|.||+.+++..+....
T Consensus 415 ---~~~~~~~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~------------------ 473 (1028)
T 2zxe_A 415 ---AFDKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQ------------------ 473 (1028)
T ss_dssp ---CCCSSCHHHHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHH------------------
T ss_pred ---CCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCHH------------------
T ss_conf ---44667789999999998657876504777776645300789409999999999589888------------------
Q ss_pred CCEEEEEEEEEECCCCCCCEEEEEEECC---CCCEEEEECCCHHHHHHHHCCC---------CCCCHHHHHHHHHHHHHC
Q ss_conf 7226999977425888981479999938---9929999736403536853017---------421199999999999853
Q 002671 590 PVEREFKILNLLDFTSKRKRMSVIVRDE---DGQILLLCKGADSIIFDRLSKN---------GRMYEEATTKLLNEYGEA 657 (894)
Q Consensus 590 ~~~~~~~il~~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~~~~ 657 (894)
..+..|++++.+||+|.||||+++++.+ ++++++|+||||+.|+++|+.. +++.++.+..++++|+.+
T Consensus 474 ~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~ 553 (1028)
T 2zxe_A 474 GMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGL 553 (1028)
T ss_dssp HHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHCCEEEEECCCCCCCEEEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 98874826787044766664799994057888717999938828999874565338972128889999999999999855
Q ss_pred CCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCEE
Q ss_conf 78288999971798899999999999885210088999999998512161798766312435678399999999749939
Q 002671 658 GLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKI 737 (894)
Q Consensus 658 GlR~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~~~ieD~lr~~v~e~I~~L~~agIkv 737 (894)
|+|||++|||.++.+++.++.. .+++ ..+.+|+|++|+|+++++||+|++++++|+.|+++||++
T Consensus 554 G~RvL~~A~~~l~~~~~~~~~~----------~~~~-----~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v 618 (1028)
T 2zxe_A 554 GERVLGFCHFALPEDKYNEGYP----------FDAD-----EPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKV 618 (1028)
T ss_dssp TCEEEEEEEEECCSTTSCTTCC----------CCTT-----TTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEE
T ss_pred CCEEEEEEEEECCCCCCCCCCC----------CCHH-----HHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCEE
T ss_conf 9979999987468221342012----------4624-----555554380998651157899844899999999869979
Q ss_pred EEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHH
Q ss_conf 99929857789999986564445843899935892036799999999769999984665321038998746999918304
Q 002671 738 WVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTL 817 (894)
Q Consensus 738 ~ilTGD~~~tA~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l 817 (894)
||+|||+..||.+||++|||...+...+ . . ..... .... ...........+++|..+
T Consensus 619 ~miTGD~~~tA~~ia~~lgi~~~~~~~i-------~----~--------~~~~~---~~~~-~~~~~~~~~~~vi~G~~l 675 (1028)
T 2zxe_A 619 IMVTGDHPITAKAIAKGVGIISEGNETI-------E----D--------IAARL---NIPI-GQVNPRDAKACVVHGSDL 675 (1028)
T ss_dssp EEECSSCHHHHHHHHHHHTSSCTTCCCH-------H----H--------HHHHT---TCCG-GGSCGGGCCEEEEEHHHH
T ss_pred EEECCCCHHHHHHHHHHCCCCCCCCHHH-------H----H--------HHHHC---CCCH-HHCCCCCCCEEEEECHHH
T ss_conf 9988997799999999869887883367-------7----7--------77641---8632-221555662699880885
Q ss_pred HHHCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHCHHHHHHCCCCEEEC
Q ss_conf 2502057999999975206907999279021999999986129998999939922099988689109833
Q 002671 818 AYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS 887 (894)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lk~~~~~~vl~iGDG~ND~~ml~~AdvGI~i~ 887 (894)
....+++ +.++...+..++|||++|+||..+|+.+|+ .|+.|+|+|||.||+|||++|||||+|+
T Consensus 676 ~~~~~~~----l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~-~g~~V~~iGDG~ND~paLk~AdvGIAmg 740 (1028)
T 2zxe_A 676 KDLSTEV----LDDILHYHTEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMG 740 (1028)
T ss_dssp TTCCHHH----HHHHHHHCSEEEEESCCHHHHHHHHHHHHH-TTCCEEEEECSGGGHHHHHHSSEEEEES
T ss_pred HHCCHHH----HHHHHHHCCCEEEEECCHHHHHHHHHHHHH-CCCEEEEECCCCCHHHHHHHCCCEEEEC
T ss_conf 6479999----999986279679998588899999999996-8998999858853399998689119967
No 2
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=1.00 E-value=1 Score=791.41 Aligned_cols=638 Identities=19% Similarity=0.218 Sum_probs=497.8
Q ss_pred CCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CC-------CCCCCHHHHHHHHHHHHHHH
Q ss_conf 6688889997000577631433599999996567999999999882123--78-------88873011547899999998
Q 002671 48 KKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP--LS-------PFSPVSMLLPLAIVVGVSMA 118 (894)
Q Consensus 48 ~~~~~~yg~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~i~il~~~~--~~-------~~~~~~~~~~l~~v~~is~~ 118 (894)
..|+.+||.|.+..++...++ +.|++||.++++++++++++++++. +. ....+...++++++++++++
T Consensus 79 ~~rl~~~G~N~l~~~~~~~~~---~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~ 155 (1034)
T 3ixz_A 79 AELLLRDGPNALRPPRGTPEY---VKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGC 155 (1034)
T ss_pred HHHHHHHCCCCCCCCCCCCHH---HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEEEHHHH
T ss_conf 999985099989998999889---99999984738999999999999999874034777654420564243013227999
Q ss_pred HHHHHHHHHHHCHHHHCC---CEEEEEECCCEEEEEECCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCEEEEECCCCC
Q ss_conf 999999998400365404---13899957971999521246448299950496038509996203899708997004689
Q 002671 119 KEALEDWRRFMQDKEVNA---RKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDG 195 (894)
Q Consensus 119 ~~~~~d~~r~k~~~~~n~---~~~~V~~r~g~~~~i~~~dL~vGDII~l~~ge~iPaD~iiL~ss~~~G~~~Vdes~LtG 195 (894)
..+++++|..++.+.+++ .+++|+ |||++++|+|++|+|||||.|++||.||||++||++++ +.||||+|||
T Consensus 156 ~~~~qe~ka~~al~~L~~l~~~~a~Vi-RdG~~~~I~~~eLv~GDiV~l~~Gd~VPAD~~ll~~~~----l~VdES~LTG 230 (1034)
T 3ixz_A 156 FGYYQEFKSTNIIASFKNLVPQQATVI-RDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQG----RKVDNSSLTG 230 (1034)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEECCCEEEEEECC----CEEEECCCCC
T ss_conf 999999999999999762489735999-99989998889879885899857964358769997088----0588336678
Q ss_pred CCCCEEECCCCCCCCCCCHHHHCCCEEEEEEECCCCCCEEEEEEEEECCEEEECCCCCEEECCEEEECCCEEEEEEEEEC
Q ss_conf 88626631444479899444430360699952799994057999998890310599972630507514894999999843
Q 002671 196 ETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTG 275 (894)
Q Consensus 196 Es~~~~K~~~~~~~~~~~~~~~~~~~g~i~~~~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~giVv~tG 275 (894)
||.|+.|.+...... ........|+||.+.+|. +.|+|++||
T Consensus 231 ES~pv~K~~~~~~~~-----------------~~~~~n~~f~GT~v~~G~---------------------~~~vVv~tG 272 (1034)
T 3ixz_A 231 ESEPQTRSPECTHES-----------------PLETRNIAFFSTMCLEGT---------------------AQGLVVNTG 272 (1034)
T ss_pred CCCCEECCCCCCCCC-----------------CCCCCCCEECCEEEEEEC---------------------CEEEEEEEH
T ss_conf 877766557776656-----------------323445122040698604---------------------249999602
Q ss_pred CCCHHHH---CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 6301010---3689999765588999899999999999999999997752202568973224788886435999986558
Q 002671 276 HDSKVMQ---NATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPG 352 (894)
Q Consensus 276 ~~Tk~~~---~~~~~~~k~s~l~~~~~~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 352 (894)
.+|.+++ +....+.+++++++.++++..++..+.++++++.++++.++.. . .
T Consensus 273 ~~T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~--------------------~ 327 (1034)
T 3ixz_A 273 DRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCIGY-----T--------------------F 327 (1034)
T ss_pred HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----H--------------------H
T ss_conf 54374089986203566789189999999999999999999999999999641-----2--------------------9
Q ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCEEECCEE
Q ss_conf 98999999986012322026779999999999883012354468999717842641000124059986498830211027
Q 002671 353 LAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMD 432 (894)
Q Consensus 353 ~~~~~~~i~l~~~~iP~sL~v~i~i~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~e~LG~v~~I~~DKTGTLT~n~m~ 432 (894)
...+.+++.+++.+||++||++++++..+++.++ +++++++|+++++|+||++++||||||||||+|+|.
T Consensus 328 ~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~rm----------ak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~ 397 (1034)
T 3ixz_A 328 LRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRL----------ASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMT 397 (1034)
T ss_pred HHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHH----------HHCCEEECCHHHHHHHCCCCEEECCCCCCCCCCEEE
T ss_conf 9999999999882026650899999999999987----------338828647678886158729972897872368379
Q ss_pred EEEEEECCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999938303789607899999862101256544321001479997310100003699986323468974355000166
Q 002671 433 FLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDG 512 (894)
Q Consensus 433 ~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~d~~~~~~ 512 (894)
|.++++++..|.....+.. .+.
T Consensus 398 v~~~~~~~~~~~~~~~~~~------------------------------------------------~~~---------- 419 (1034)
T 3ixz_A 398 VSHLWFDNHIHSADTTEDQ------------------------------------------------SGQ---------- 419 (1034)
T ss_pred EEEEEECCCCCCCCCCCCC------------------------------------------------CCC----------
T ss_conf 9999977951225676665------------------------------------------------665----------
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCC--CEEEECCCHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCC
Q ss_conf 788899826799999998310304611358999--736641896199999999988959997739858999418998987
Q 002671 513 NWLKEPNVDTLLLFFRILAICHTAIPELNEETG--NLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQP 590 (894)
Q Consensus 513 ~~~~~~~~~~~~~~~~~l~lC~t~~~~~~~~~~--~~~y~~~sp~e~Al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~ 590 (894)
...........++.++++||++....+.+.. ...+..++|.|.|++.++...+.....
T Consensus 420 --~~~~~~~~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~------------------ 479 (1034)
T 3ixz_A 420 --TFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMG------------------ 479 (1034)
T ss_pred --CCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCHHH------------------
T ss_conf --567677899999999887162665357677766574355492599999999985788688------------------
Q ss_pred CEEEEEEEEEECCCCCCCEEEEEEECC---CCCEEEEECCCHHHHHHHHCC---------CCCCCHHHHHHHHHHHHHCC
Q ss_conf 226999977425888981479999938---992999973640353685301---------74211999999999998537
Q 002671 591 VEREFKILNLLDFTSKRKRMSVIVRDE---DGQILLLCKGADSIIFDRLSK---------NGRMYEEATTKLLNEYGEAG 658 (894)
Q Consensus 591 ~~~~~~il~~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~---------~~~~~~~~~~~~l~~~~~~G 658 (894)
.+..|+.++.+||+|.||||+++++.+ ++.+++|+|||||.|+++|+. .+++.++.+...+++++.+|
T Consensus 480 ~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G 559 (1034)
T 3ixz_A 480 YRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLG 559 (1034)
T ss_pred HHHHCCCEEEEEECCCCCEEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHCC
T ss_conf 89748606995035777268999983378886089999688499999737755289640199999999999999987147
Q ss_pred CEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCEEE
Q ss_conf 82889999717988999999999998852100889999999985121617987663124356783999999997499399
Q 002671 659 LRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIW 738 (894)
Q Consensus 659 lR~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~~~ieD~lr~~v~e~I~~L~~agIkv~ 738 (894)
+|||++|||.++.+++..+... +++ ..+.+|+||+|+|+++++||+|++++++|+.|+++||++|
T Consensus 560 ~RvLa~A~~~l~~~~~~~~~~~----------~~~-----~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vv 624 (1034)
T 3ixz_A 560 ERVLGFCQLYLSEKDYPPGYAF----------DVE-----AMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVI 624 (1034)
T ss_pred CHHHEEEEEECCHHHCCCCCCC----------CHH-----HHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEE
T ss_conf 5823686785580004321124----------534-----4302224867988871368870659999999998699699
Q ss_pred EECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHH
Q ss_conf 99298577899999865644458438999358920367999999997699999846653210389987469999183042
Q 002671 739 VLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLA 818 (894)
Q Consensus 739 ilTGD~~~tA~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~ 818 (894)
|+|||++.||.++|+++|+..++...+ ... ....... ............+++|..+.
T Consensus 625 miTGd~~~tA~~ia~~lgi~~~~~~~i----------~~~---~~~~~~~----------~~~~~~~~~~~~~~~g~~l~ 681 (1034)
T 3ixz_A 625 MVTGDHPITAKAIAASVGIISEGSETV----------EDI---AARLRVP----------VDQVNRKDARACVINGMQLK 681 (1034)
T ss_pred EEECCCHHHHHHHHHHCCCCCCCCHHH----------HHH---HHHHCCC----------CHHCCCCCCCEEEEECHHHH
T ss_conf 996997799999999869998872478----------888---8761765----------00025445431677167666
Q ss_pred HHCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHCHHHHHHCCCCEEEC
Q ss_conf 502057999999975206907999279021999999986129998999939922099988689109833
Q 002671 819 YALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS 887 (894)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lk~~~~~~vl~iGDG~ND~~ml~~AdvGI~i~ 887 (894)
....+++ .+....+...+|||++|+||..+|+.+++ .|+.|+|+|||.||++||++||+||||+
T Consensus 682 ~~~~~~l----~~~~~~~~~~v~ar~~P~~K~~iv~~lq~-~g~~V~a~GDG~ND~~mLk~A~vGIAMg 745 (1034)
T 3ixz_A 682 DMDPSEL----VEALRTHPEMVFARTSPQQKLVIVESCQR-LGAIVAVTGDGVNDSPALKKADIGVAMG 745 (1034)
T ss_pred HCCHHHH----HHHHHHCCCEEEEECCHHHHHHHHHHHHH-CCCEEEEECCCHHHHHHHHHCCEEEEEC
T ss_conf 3899999----99987378269996698999999999997-6999999879577699999789329807
No 3
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=1.00 E-value=1 Score=790.56 Aligned_cols=665 Identities=21% Similarity=0.233 Sum_probs=487.0
Q ss_pred CCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCC-----CCCHHHHHHHHHHHHHHHHH
Q ss_conf 66688889997000577631433599999996567999999999882123-7888-----87301154789999999899
Q 002671 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP-LSPF-----SPVSMLLPLAIVVGVSMAKE 120 (894)
Q Consensus 47 ~~~~~~~yg~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~i~il~~~~-~~~~-----~~~~~~~~l~~v~~is~~~~ 120 (894)
...|+.+||.|.++.+++..++ +.|++||++++++++++++++++++ +.+. ..+...+.++++++++++..
T Consensus 30 ~~~r~~~~G~N~l~~~~~~~~~---~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~ 106 (995)
T 3ar4_A 30 VKRHLEKYGHNELPAEEGKSLW---ELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVG 106 (995)
T ss_dssp HHHHHHHHCCSSCCCCCCCCHH---HHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSGGGSSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999975688732898898699---9999999889999999999999998860256654034787688667889999999
Q ss_pred HHHHHHHHHCHH---HHCCCEEEEEECCCE--EEEEECCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCEEEEECCCCC
Q ss_conf 999999840036---540413899957971--999521246448299950496038509996203899708997004689
Q 002671 121 ALEDWRRFMQDK---EVNARKVSVHVGNGV--FSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDG 195 (894)
Q Consensus 121 ~~~d~~r~k~~~---~~n~~~~~V~~r~g~--~~~i~~~dL~vGDII~l~~ge~iPaD~iiL~ss~~~G~~~Vdes~LtG 195 (894)
.+++++..++.+ .+...+++|+ |||. +++|+|++|+|||||.|++||.||||++||+.+. +.|+||||+|||
T Consensus 107 ~~qe~~a~~al~~L~~~~~~~a~V~-R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD~~ll~~~s--~~l~VdeS~LTG 183 (995)
T 3ar4_A 107 VWQERNAENAIEALKEYEPEMGKVY-RADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKS--TTLRVDQSILTG 183 (995)
T ss_dssp HHHHHHCCCHHHHHGGGSCSEEEEE-BTTCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECS--SCEEEECHHHHC
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEE-ECCCCEEEEEEHHHCCCCCEEEECCCCCCCCCEEEEEEEE--CEEEEECCCCCC
T ss_conf 9999999999999871089738999-3798647997899987787899889784354489998850--439998252468
Q ss_pred CCCCEEECCCCCCCCCCCHHHHCCCEEEEEEECCCCCCEEEEEEEEECCEEEECCCCCEEECCEEEECCCEEEEEEEEEC
Q ss_conf 88626631444479899444430360699952799994057999998890310599972630507514894999999843
Q 002671 196 ETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTG 275 (894)
Q Consensus 196 Es~~~~K~~~~~~~~~~~~~~~~~~~g~i~~~~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~giVv~tG 275 (894)
||.|+.|.+.+... + ...+.+..|++++||.+.+ ++++|+|++||
T Consensus 184 ES~pv~K~~~~~~~-------------------~---------------~~~~~~~~~~v~~GT~v~~-G~~~~~V~~tG 228 (995)
T 3ar4_A 184 ESVSVIKHTEPVPD-------------------P---------------RAVNQDKKNMLFSGTNIAA-GKALGIVATTG 228 (995)
T ss_dssp CCSCEEECCSCCCC-------------------T---------------TCCGGGCTTEECTTCEEEE-CEEEEEEEECG
T ss_pred CCCCEECCCCCCCC-------------------C---------------CCCCCCCCCEEECCCEEEC-CEEEEEEEECC
T ss_conf 87633400456677-------------------6---------------6675554546761878984-45899999767
Q ss_pred CCCHHHHCC---CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 630101036---8999976558899989999999999999999999775220256-897322478888643599998655
Q 002671 276 HDSKVMQNA---TTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQ-TPQWWYLKPKETDVYFNPGKPLVP 351 (894)
Q Consensus 276 ~~Tk~~~~~---~~~~~k~s~l~~~~~~~~~~~~~~~i~~~~i~~i~~~~~~~~~-~~~~~yl~~~~~~~~~~~~~~~~~ 351 (894)
.+|+++++. ..++.+++++++.++++..++..+.+++|++.++++..+.... ....|+ ..
T Consensus 229 ~~T~~g~i~~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~ 292 (995)
T 3ar4_A 229 VSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWI----------------RG 292 (995)
T ss_dssp GGSHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSSSSCHH----------------HH
T ss_pred CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH----------------HH
T ss_conf 22198999997325787899389999999999999999999999999998741433464079----------------99
Q ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCEEECCE
Q ss_conf 89899999998601232202677999999999988301235446899971784264100012405998649883021102
Q 002671 352 GLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQM 431 (894)
Q Consensus 352 ~~~~~~~~i~l~~~~iP~sL~v~i~i~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~e~LG~v~~I~~DKTGTLT~n~m 431 (894)
....|..++.+++.+||++||++++++..+++.++ +++++++|+++++|+||++++||||||||||+|+|
T Consensus 293 ~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~~~~m----------a~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m 362 (995)
T 3ar4_A 293 AIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRM----------AKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQM 362 (995)
T ss_dssp HHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCC
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH----------CCCCCEECCCHHHHHHCCCEEEEECCCCCCCCCCE
T ss_conf 99999999999998667604899999999999984----------41784861341555503833997658887665856
Q ss_pred EEEEEEECCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 79999993830378960789999986210125654432100147999731010000369998632346897435500016
Q 002671 432 DFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMD 511 (894)
Q Consensus 432 ~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~d~~~~~ 511 (894)
.|.++++.+..++..... ....... .+.++ .......
T Consensus 363 ~v~~~~~~~~~~~~~~~~-----------------------------~~~~~~~-------~~~~p-------~~~~~~~ 399 (995)
T 3ar4_A 363 SVCKMFIIDKVDGDFCSL-----------------------------NEFSITG-------STYAP-------EGEVLKN 399 (995)
T ss_dssp EEEEEEEEEEEETTEEEE-----------------------------EEEEECC-------SSSSS-------CCCEEET
T ss_pred EEEEEEECCCCCCCCCCC-----------------------------CEEECCC-------CCCCC-------CCCCCCC
T ss_conf 999998347556765543-----------------------------0254047-------77688-------6310136
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCC
Q ss_conf 67888998267999999983103046113589997366418961999999999889599977398589994189989872
Q 002671 512 GNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPV 591 (894)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~l~lC~t~~~~~~~~~~~~~y~~~sp~e~Al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~ 591 (894)
+..........+.+++.++++||++....++.. ......++|+|.||+.+++++|+ +..+ ...+...+.........
T Consensus 400 ~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~-~~~~~~g~p~E~Al~~~a~~~g~-~~~~-~~~i~~~~~~~~~~~~~ 476 (995)
T 3ar4_A 400 DKPIRSGQFDGLVELATICALCNDSSLDFNETK-GVYEKVGEATETALTTLVEKMNV-FNTE-VRNLSKVERANACNSVI 476 (995)
T ss_dssp TEECCGGGCHHHHHHHHHHHHSCCCEEEEETTT-TEEEEESCHHHHHHHHHHHHHCT-TCCC-CTTSCTTTSTTHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC-CCEEECCCCCHHHHHHHHHHCCC-CCCC-CCCCCCCCCCCCCHHHH
T ss_conf 643444455899999999987488805656889-83255479647999999998399-6410-00134201012101556
Q ss_pred EEEEEEEEEECCCCCCCEEEEEEECCCC-----CEEEEECCCHHHHHHHHCCC---------CCCCHHHHHHHHHHH--H
Q ss_conf 2699997742588898147999993899-----29999736403536853017---------421199999999999--8
Q 002671 592 EREFKILNLLDFTSKRKRMSVIVRDEDG-----QILLLCKGADSIIFDRLSKN---------GRMYEEATTKLLNEY--G 655 (894)
Q Consensus 592 ~~~~~il~~~~F~s~rkrmsviv~~~~~-----~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~--~ 655 (894)
+..|++++.+||+|+||||||+++.++| .+.+|+||||+.|+++|+.. +++.++.+.+++++| +
T Consensus 477 ~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a 556 (995)
T 3ar4_A 477 RQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTG 556 (995)
T ss_dssp HHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHS
T ss_pred HHHCCEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEEECCCHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 64174577740488887569998348987666444999758879999854054428973249999999999999987763
Q ss_pred HCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHCCC
Q ss_conf 53782889999717988999999999998852100889999999985121617987663124356783999999997499
Q 002671 656 EAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGL 735 (894)
Q Consensus 656 ~~GlR~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~~~ieD~lr~~v~e~I~~L~~agI 735 (894)
.+|+|||++|||+++..+. ...+ .+. ..++.+|+||+|+|+++++|++|++++++|+.|+++||
T Consensus 557 ~~GlRvLa~A~k~~~~~~~----------~~~~-~~~-----~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi 620 (995)
T 3ar4_A 557 RDTLRCLALATRDTPPKRE----------EMVL-DDS-----SRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGI 620 (995)
T ss_dssp TTCCEEEEEEEESSCCCGG----------GCCT-TCG-----GGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTC
T ss_pred HCCCEEEEEEEEECCCCCC----------CCCC-CCC-----HHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCC
T ss_conf 0561488999983476511----------1222-340-----24455306948999985258896669999999998699
Q ss_pred EEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC
Q ss_conf 39999298577899999865644458438999358920367999999997699999846653210389987469999183
Q 002671 736 KIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGK 815 (894)
Q Consensus 736 kv~ilTGD~~~tA~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~ 815 (894)
++||+|||+..||.++|+++||...+... . ..+++|+
T Consensus 621 ~v~miTGD~~~ta~~ia~~lgi~~~~~~i------~-------------------------------------~~~~~g~ 657 (995)
T 3ar4_A 621 RVIMITGDNKGTAIAICRRIGIFGENEEV------A-------------------------------------DRAYTGR 657 (995)
T ss_dssp EEEEEESSCHHHHHHHHHHHTSSCTTCCC------T-------------------------------------TTEEEHH
T ss_pred EEEEECCCCHHHHHHHHHHCCCCCCCCCC------C-------------------------------------CEEEECH
T ss_conf 89998999789999999983967788753------5-------------------------------------3489836
Q ss_pred HHHHHCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHCHHHHHHCCCCEEECCCCCC
Q ss_conf 04250205799999997520690799927902199999998612999899993992209998868910983386446
Q 002671 816 TLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGC 892 (894)
Q Consensus 816 ~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lk~~~~~~vl~iGDG~ND~~ml~~AdvGI~i~g~eg~ 892 (894)
.+....++++.+.. . +..+|||++|+||+.+|+.+|+ .|+.|+|+|||.||++||++||+||+|+ +|+
T Consensus 658 ~~~~l~~~~~~~~~----~--~~~v~~r~~P~~K~~~v~~l~~-~g~~v~~~GDG~ND~~alk~Advgiamg--~g~ 725 (995)
T 3ar4_A 658 EFDDLPLAEQREAC----R--RACCFARVEPSHKSKIVEYLQS-YDEITAMTGDGVNDAPALKKAEIGIAMG--SGT 725 (995)
T ss_dssp HHHTSCHHHHHHHH----H--HCCEEESCCSSHHHHHHHHHHT-TTCCEEEEECSGGGHHHHHHSTEEEEET--TSC
T ss_pred HHHHCCHHHHHHHH----H--HCCEEEEECHHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHCCEEEEEC--CCC
T ss_conf 64628999999987----5--3738997089999999999997-7997999838814499998789679967--889
No 4
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=1.00 E-value=1 Score=738.69 Aligned_cols=554 Identities=20% Similarity=0.242 Sum_probs=440.0
Q ss_pred CCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 66888899970005776314335999999965679999999998821237888873011547899999998999999998
Q 002671 48 KKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRR 127 (894)
Q Consensus 48 ~~~~~~yg~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~i~il~~~~~~~~~~~~~~~~l~~v~~is~~~~~~~d~~r 127 (894)
..|+.+||.|.++.+++++| +.|++||..|.+++++++++++++. ..|.. ...++++++++++.+++++++.
T Consensus 94 ~~r~~~~G~N~l~~~~~~~~----~~~l~~f~~~~~~ll~~aai~s~~~---g~~~~-~~~i~~vv~i~~~i~~~qe~~a 165 (920)
T 1mhs_A 94 VQRRRKYGLNQMKEEKENHF----LKFLGFFVGPIQFVMEGAAVLAAGL---EDWVD-FGVICGLLLLNAVVGFVQEFQA 165 (920)
T ss_dssp HHHHHHTSSSSCCCCCCSSH----HHHTHHHHHHHHHHHHHHHHHCTTC---SCSSH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCCCCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999639981588888899----9999999879999999999999999---76899-9999999999999999999999
Q ss_pred HHCHHHHCC---CEEEEEECCCEEEEEECCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCEEECC
Q ss_conf 400365404---13899957971999521246448299950496038509996203899708997004689886266314
Q 002671 128 FMQDKEVNA---RKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRA 204 (894)
Q Consensus 128 ~k~~~~~n~---~~~~V~~r~g~~~~i~~~dL~vGDII~l~~ge~iPaD~iiL~ss~~~G~~~Vdes~LtGEs~~~~K~~ 204 (894)
.++.+.+++ .+++|+ |||++++|++++|+|||||.|++||.||||++|++++ +.+.||||.|||||.|+.|.+
T Consensus 166 ~~a~~~L~~l~~~~a~V~-RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~---~~l~VDES~LTGES~PV~K~~ 241 (920)
T 1mhs_A 166 GSIVDELKKTLALKAVVL-RDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDD---AFLQVDQSALTGESLAVDKHK 241 (920)
T ss_dssp HHHHHTTTTCCCSSCEEE-CSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEES---SCCEEBCTTTSSCCCCEECCS
T ss_pred HHHHHHHHCCCCCEEEEE-ECCEEEEEEHHHCCCCCEEEECCCCCCCCCEEEEECC---CEEEEECCCCCCCCCCEEECC
T ss_conf 999998633599879999-8998999898995889789967797336656999457---223202222478886469347
Q ss_pred CCCCCCCCCHHHHCCCEEEEEEECCCCCCEEEEEEEEECCEEEECCCCCEEECCEEEECCCEEEEEEEEECCCCHHHHCC
Q ss_conf 44479899444430360699952799994057999998890310599972630507514894999999843630101036
Q 002671 205 MEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNA 284 (894)
Q Consensus 205 ~~~~~~~~~~~~~~~~~g~i~~~~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~giVv~tG~~Tk~~~~~ 284 (894)
.+. .|+||.+.+|. +.++|++||.+|.++++.
T Consensus 242 gd~---------------------------v~sGT~v~~G~---------------------~~~~V~~tG~~T~~g~I~ 273 (920)
T 1mhs_A 242 GDQ---------------------------VFASSAVKRGE---------------------AFVVITATGDNTFVGRAA 273 (920)
T ss_dssp SCE---------------------------ECSCBCCSCCC---------------------EEEEEEECSTTCSTTTTT
T ss_pred CCE---------------------------EECCCEEECCE---------------------EEEEEEEECCCCHHHHHH
T ss_conf 986---------------------------30376695135---------------------999999957767888998
Q ss_pred C---CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 8---9999765588999899999999999999999997752202568973224788886435999986558989999999
Q 002671 285 T---TSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALI 361 (894)
Q Consensus 285 ~---~~~~k~s~l~~~~~~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~i~ 361 (894)
. .++.+++++++.++++..+++++.++++++.++.+. +.. ......+.+++.
T Consensus 274 ~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~~~~-----------~~~--------------~~~~~~l~~av~ 328 (920)
T 1mhs_A 274 ALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSSF-----------YRS--------------NPIVQILEFTLA 328 (920)
T ss_dssp SSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-----------TTT--------------CCHHHHHHHHHH
T ss_pred HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HCC--------------CCHHHHHHHHHH
T ss_conf 8776424677649999999999999999999999999988-----------468--------------869999999999
Q ss_pred HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCEEECCEEEEEEEECCC
Q ss_conf 86012322026779999999999883012354468999717842641000124059986498830211027999999383
Q 002671 362 LYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGT 441 (894)
Q Consensus 362 l~~~~iP~sL~v~i~i~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~i~~~ 441 (894)
+++.+||++|+++++++..+++.++ +++++++|+++.+|.||++++||||||||||+|+|.+.+++..+.
T Consensus 329 llV~aiP~aLp~~vti~la~g~~~m----------ak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g 398 (920)
T 1mhs_A 329 ITIIGVPVGLPAVVTTTMAVGAAYL----------AKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAG 398 (920)
T ss_dssp HHHHHSCCCHHHHHHHHHHHHHHHH----------HHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSC
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHH----------HHCCEEEECCCHHHHHCCCCEEEECCCCCCCCCCEEEEEEEECCC
T ss_conf 9987676037777899999999999----------868838705713555436768997788875555316999850699
Q ss_pred CCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 03789607899999862101256544321001479997310100003699986323468974355000166788899826
Q 002671 442 AYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVD 521 (894)
Q Consensus 442 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 521 (894)
+ ++
T Consensus 399 -~-------------------------------------------------------------------------~~--- 401 (920)
T 1mhs_A 399 -V-------------------------------------------------------------------------DP--- 401 (920)
T ss_dssp -C-------------------------------------------------------------------------CC---
T ss_pred -C-------------------------------------------------------------------------CH---
T ss_conf -8-------------------------------------------------------------------------98---
Q ss_pred HHHHHHHHHHHCCEEEECCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCEEEEEEEEEE
Q ss_conf 79999999831030461135899973664189619999999998895999773985899941899898722699997742
Q 002671 522 TLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLL 601 (894)
Q Consensus 522 ~~~~~~~~l~lC~t~~~~~~~~~~~~~y~~~sp~e~Al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~ 601 (894)
.+++.+.++|+.... ..+||.|.|++++++..+... .....|++++.+
T Consensus 402 --~~ll~~a~l~~~~~~-----------~~~~P~e~Al~~~~~~~~~~~-------------------~~~~~~~~~~~~ 449 (920)
T 1mhs_A 402 --EDLMLTACLAASRKK-----------KGIDAIDKAFLKSLKYYPRAK-------------------SVLSKYKVLQFH 449 (920)
T ss_dssp --THHHHHHHHSCCCSS-----------CSCCSHHHHHHHHHHHSSSCC-------------------GGGSCCCEEEEE
T ss_pred --HHHHHHHHHHCCCCC-----------CCCCHHHHHHHHHHHHCCCCH-------------------HHCCCCCEEEEE
T ss_conf --999999998547766-----------689858999999999646310-------------------101355335786
Q ss_pred CCCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHCCC---CCCCHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHH
Q ss_conf 58889814799999389929999736403536853017---421199999999999853782889999717988999999
Q 002671 602 DFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKN---GRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWN 678 (894)
Q Consensus 602 ~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---~~~~~~~~~~~l~~~~~~GlR~l~~A~k~l~~~e~~~~~ 678 (894)
||+|.||||+++++.++|+.++|+||||+.|+++|+.. +++.++.+..++++++.+|+|+|++|+|..
T Consensus 450 pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~~--------- 520 (920)
T 1mhs_A 450 PFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG--------- 520 (920)
T ss_dssp EEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCSS---------
T ss_pred ECCCCCCEEEEEEEECCCCEEEEEECCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECC---------
T ss_conf 11677885999999679918999908799999861356789878899899999999867997999998326---------
Q ss_pred HHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf 99999885210088999999998512161798766312435678399999999749939999298577899999865644
Q 002671 679 SEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLL 758 (894)
Q Consensus 679 ~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~~~ieD~lr~~v~e~I~~L~~agIkv~ilTGD~~~tA~~ia~~~gl~ 758 (894)
|.+++|+|+++++||+|++++++|+.|+++||++||+|||++.||.+||+++||.
T Consensus 521 -------------------------e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~ 575 (920)
T 1mhs_A 521 -------------------------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLG 575 (920)
T ss_dssp -------------------------SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSS
T ss_pred -------------------------CCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCC
T ss_conf -------------------------6530788999973432101799999986257449998389789999999984999
Q ss_pred CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHCCHHHHHHHHHHHHCCCE
Q ss_conf 45843899935892036799999999769999984665321038998746999918304250205799999997520690
Q 002671 759 RQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECAS 838 (894)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~ 838 (894)
.... +... ++++|. ....++++. +... +.
T Consensus 576 ~~~~-----~~~~--------------------------------------~~~~g~--~~~~~~el~----~~~~--~~ 604 (920)
T 1mhs_A 576 TNIY-----NAER--------------------------------------LGLGGG--GDMPGSEVY----DFVE--AA 604 (920)
T ss_dssp CSCC-----CSSS--------------------------------------SSSCBC--CCGGGGGGG----TTTT--TT
T ss_pred CCCC-----CCCC--------------------------------------EEECCC--CCCCHHHHH----HHHH--HC
T ss_conf 6546-----7541--------------------------------------242276--558989999----8775--18
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHCHHHHHHCCCCEEECCCCCCC
Q ss_conf 7999279021999999986129998999939922099988689109833864468
Q 002671 839 VICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGCD 893 (894)
Q Consensus 839 vv~~r~sP~qK~~iV~~lk~~~~~~vl~iGDG~ND~~ml~~AdvGI~i~g~eg~q 893 (894)
.||||++|+||..+|+.+|+ .|+.|+|+|||.||+|||++|||||+|++ |++
T Consensus 605 ~V~arv~P~~K~~iV~~Lq~-~g~~Vam~GDGvNDapaLk~AdvGIAmg~--gtd 656 (920)
T 1mhs_A 605 DGFAEVFPQHKYNVVEILQQ-RGYLVAMTGDGVNDAPSLKKADTGIAVEG--SSD 656 (920)
T ss_dssp SCEESCCSTHHHHHHHHHHT-TTCCCEECCCCGGGHHHHHHSSEEEEETT--SCH
T ss_pred EEEEEECHHHHHHHHHHHHH-CCCEEEEECCCCCCHHHHHHCCCCCCCCC--CCH
T ss_conf 19998379999999999996-79969998288100999985786740564--339
No 5
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=1.00 E-value=1 Score=735.07 Aligned_cols=559 Identities=19% Similarity=0.217 Sum_probs=431.1
Q ss_pred CCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC----CCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 6668888999700057763143359999999656799999999988212378----888730115478999999989999
Q 002671 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLS----PFSPVSMLLPLAIVVGVSMAKEAL 122 (894)
Q Consensus 47 ~~~~~~~yg~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~i~il~~~~~~----~~~~~~~~~~l~~v~~is~~~~~~ 122 (894)
...|+.+||.|.++.++++.| +.|++||..|++++++++++++++... +..|+.. +.++++++++.+.+.+
T Consensus 38 ~~~r~~~~G~N~l~~~~~~~~----~~~l~~~~~p~~~il~~aaiis~~l~~~~~~~~~~~~~-~~I~~~v~i~~~l~~~ 112 (885)
T 3b8c_A 38 GEDRIQIFGPNKLEEKKESKL----LKFLGFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDF-VGIICLLVINSTISFI 112 (885)
T ss_dssp HHHHSSSCCSCCTTTTCCCTT----SSTTSCCCGGGSSHHHHHHHGGGGSSCCTTSCSCCTTH-HHHHHHTTTTTTTTTT
T ss_pred HHHHHHHCCCCCCCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH-HHHHHHHHHHHHHHHH
T ss_conf 999998519971588788799----99999999999999999999999997045663018899-9999999999999999
Q ss_pred HHHHHHHCHHHH---CCCEEEEEECCCEEEEEECCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCC
Q ss_conf 999984003654---04138999579719995212464482999504960385099962038997089970046898862
Q 002671 123 EDWRRFMQDKEV---NARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNL 199 (894)
Q Consensus 123 ~d~~r~k~~~~~---n~~~~~V~~r~g~~~~i~~~dL~vGDII~l~~ge~iPaD~iiL~ss~~~G~~~Vdes~LtGEs~~ 199 (894)
++++..++.+.+ ...+++|+ |||++++|++++|+|||||.|++||.||||++|+++++ ++||||.|||||.|
T Consensus 113 qe~ka~~al~~L~~~~~~~a~V~-RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~g~~----l~VdES~LTGES~P 187 (885)
T 3b8c_A 113 EENNAGNAAAALMAGLAPKTKVL-RDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDP----LKVDQSALTGESLP 187 (885)
T ss_dssp TTTTTTTHHHHTTTSCSCCCCCC-CSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCCSSC----BCCCCCSTTCCSSC
T ss_pred HHHHHHHHHHHHHCCCCCEEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEEECEEEEECCC----CCCCCCCCCCCCCC
T ss_conf 99999999999733499869999-99989998989979897899889999930359997675----40034446888864
Q ss_pred EEECCCCCCCCCCCHHHHCCCEEEEEEECCCCCCEEEEEEEEECCEEEECCCCCEEECCEEEECCCEEEEEEEEECCCCH
Q ss_conf 66314444798994444303606999527999940579999988903105999726305075148949999998436301
Q 002671 200 KVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSK 279 (894)
Q Consensus 200 ~~K~~~~~~~~~~~~~~~~~~~g~i~~~~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~~~giVv~tG~~Tk 279 (894)
+.|.+.+.. |+||.+.+|. +.++|++||.+|.
T Consensus 188 v~K~~g~~v---------------------------~~GT~v~~G~---------------------~~~~V~~tG~~T~ 219 (885)
T 3b8c_A 188 VTKHPGQEV---------------------------FSGSTCKQGE---------------------IEAVVIATGVHTF 219 (885)
T ss_dssp CCBSSCCCC---------------------------CSCCCCCSCC---------------------CCCBCCSCTTTTT
T ss_pred EEECCCCCC---------------------------CCCEEEEEEE---------------------EEEEEEECCCCCH
T ss_conf 583489830---------------------------2675995117---------------------9999997573019
Q ss_pred HHHCCC--CCCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 010368--9999765588999899999999-9999999999977522025689732247888864359999865589899
Q 002671 280 VMQNAT--TSPSKRSGIEKKMDKIIFILFA-ILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHL 356 (894)
Q Consensus 280 ~~~~~~--~~~~k~s~l~~~~~~~~~~~~~-~~i~~~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~ 356 (894)
++++.+ ....+++++++.++++..+++. +.+.++++.++.+.+. . ..| ...+
T Consensus 220 ~g~i~~lv~~~~~~~~lq~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~----~~~--------------------~~~~ 274 (885)
T 3b8c_A 220 FGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQ-R----RKY--------------------RDGI 274 (885)
T ss_dssp STTCCCSCCSCSCCSTTTTTTHHHHHHHHHHHHHHHHHHSTTTTTTT-C----SCS--------------------TTHH
T ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-C----CCH--------------------HHHH
T ss_conf 99999998646446849999999999999999999999999999980-6----869--------------------9999
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCEEECCEEEEEE
Q ss_conf 99999860123220267799999999998830123544689997178426410001240599864988302110279999
Q 002671 357 VTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKC 436 (894)
Q Consensus 357 ~~~i~l~~~~iP~sL~v~i~i~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~ 436 (894)
.+++.+++.+||++||++++++..+++.++ +++++++|+++.+|+||++++||||||||||+|+|.+.++
T Consensus 275 ~~~v~llv~aiP~aLp~~vti~la~g~~r~----------ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~ 344 (885)
T 3b8c_A 275 DNLLVLLIGGIPIAMPTVLSVTMAIGSHRL----------SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKN 344 (885)
T ss_dssp HHHHHHTTTTCCSSTTTHHHHTTTHHHHHH----------TTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHCCEEECCCHHHHHHHCCCEEEECCCCCCCCCCEEEEEE
T ss_conf 999999999703689999999999999999----------7198696895188897679989987998761685279987
Q ss_pred EECCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99383037896078999998621012565443210014799973101000036999863234689743550001667888
Q 002671 437 SVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLK 516 (894)
Q Consensus 437 ~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~d~~~~~~~~~~ 516 (894)
.+. .++.+
T Consensus 345 ~~~--~~~~~---------------------------------------------------------------------- 352 (885)
T 3b8c_A 345 LVE--VFCKG---------------------------------------------------------------------- 352 (885)
T ss_dssp CCC--SSCSS----------------------------------------------------------------------
T ss_pred EEE--CCCCC----------------------------------------------------------------------
T ss_conf 775--15899----------------------------------------------------------------------
Q ss_pred CCCHHHHHHHHHHHHHCCEEEECCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCEEEEE
Q ss_conf 99826799999998310304611358999736641896199999999988959997739858999418998987226999
Q 002671 517 EPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFK 596 (894)
Q Consensus 517 ~~~~~~~~~~~~~l~lC~t~~~~~~~~~~~~~y~~~sp~e~Al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~ 596 (894)
....+++.+.++|+... ++||.|.|++.++.... . ....|+
T Consensus 353 ----~~~~~ll~~aa~~~~~~-------------~~~p~~~Al~~~~~~~~---------~-------------~~~~~~ 393 (885)
T 3b8c_A 353 ----VEKDQVLLFAAMASRVE-------------NQDAIDAAMVGMLADPK---------E-------------ARAGIR 393 (885)
T ss_dssp ----TTHHHHHHHHHHHCCSS-------------SCCSHHHHHHHTTCCTT---------C-------------CCCSSC
T ss_pred ----CCHHHHHHHHHHHHCCC-------------CCCCHHHHHHHHHHCHH---------H-------------HHHCCC
T ss_conf ----99999999999972788-------------99915899999864636---------5-------------762483
Q ss_pred EEEEECCCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHH
Q ss_conf 97742588898147999993899299997364035368530174211999999999998537828899997179889999
Q 002671 597 ILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSA 676 (894)
Q Consensus 597 il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~GlR~l~~A~k~l~~~e~~~ 676 (894)
+++.+||+|.||||+++++..+|+.++|+||||+.|+++|+.. ...++.+.+.+++++.+|+|+|++|+|++++.+
T Consensus 394 ~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~-~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~--- 469 (885)
T 3b8c_A 394 EVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKAS-NDLSKKVLSIIDKYAERGLRSLAVARQVVPEKT--- 469 (885)
T ss_dssp CBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCC-STTTTTHHHHHHHHTTTTCEEEEECCBCCCSSS---
T ss_pred EEECCCCCCCCCEEEEEEEECCCCEEEEEECCHHHHHHHCCCC-HHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC---
T ss_conf 2201357852256899998048968999948899999764586-445799999999998579869999994466433---
Q ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 99999998852100889999999985121617987663124356783999999997499399992985778999998656
Q 002671 677 WNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACS 756 (894)
Q Consensus 677 ~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~~~ieD~lr~~v~e~I~~L~~agIkv~ilTGD~~~tA~~ia~~~g 756 (894)
+ +..|++++|+|+++++||+|++++++|+.|+++||++||+|||+..||.+||+++|
T Consensus 470 ---------------~--------~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lG 526 (885)
T 3b8c_A 470 ---------------K--------ESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 526 (885)
T ss_dssp ---------------S--------SCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTT
T ss_pred ---------------C--------CCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHC
T ss_conf ---------------1--------11356757999999606661208999999997699689993998699999999809
Q ss_pred CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHCC-HHHHHHHHHHHHC
Q ss_conf 444584389993589203679999999976999998466532103899874699991830425020-5799999997520
Q 002671 757 LLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALE-DDMKHHFLGLAVE 835 (894)
Q Consensus 757 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~-~~~~~~~~~~~~~ 835 (894)
|..+... .. ++.|..++..+. .++. ++...
T Consensus 527 i~~~~~~--------~~-------------------------------------~l~g~~~~~~~~~~~l~----~~~~~ 557 (885)
T 3b8c_A 527 MGTNMYP--------SS-------------------------------------ALLGTHKDANLASIPVE----ELIEK 557 (885)
T ss_dssp CTTCCST--------TS-------------------------------------SCCBGGGGTTSCCSCHH----HHHHT
T ss_pred CCCCCCC--------CC-------------------------------------EEECCCCCCCCCHHHHH----HHHHH
T ss_conf 7646677--------51-------------------------------------44555312224635799----99863
Q ss_pred CCEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHCHHHHHHCCCCEEECC
Q ss_conf 69079992790219999999861299989999399220999886891098338
Q 002671 836 CASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISG 888 (894)
Q Consensus 836 ~~~vv~~r~sP~qK~~iV~~lk~~~~~~vl~iGDG~ND~~ml~~AdvGI~i~g 888 (894)
..||+|++|+||..+|+.+|+ .|+.|+|+|||.||+|||++|||||+|++
T Consensus 558 --~~v~arv~P~~K~~iV~~lq~-~g~~Vam~GDGvNDapaLk~AdvGIAmg~ 607 (885)
T 3b8c_A 558 --ADGFAGVFPEHKYEIVKKLQE-RKHIVGMTGDGVNDAPALKKADIGIAVAD 607 (885)
T ss_dssp --SCCEECCCHHHHHHHHHHHHH-TTCCCCBCCCSSTTHHHHHHSSSCCCCSS
T ss_pred --CCEEEEECHHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHCCEEEEECC
T ss_conf --868988789999999999997-79969997598122999986997599577
No 6
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=1.00 E-value=1 Score=561.16 Aligned_cols=448 Identities=20% Similarity=0.248 Sum_probs=365.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHC------CCEEEEEECCCEEEEEECCCCCCCCEEEEECCCCCCCEEEEEE
Q ss_conf 1154789999999899999999840036540------4138999579719995212464482999504960385099962
Q 002671 105 MLLPLAIVVGVSMAKEALEDWRRFMQDKEVN------ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLS 178 (894)
Q Consensus 105 ~~~~l~~v~~is~~~~~~~d~~r~k~~~~~n------~~~~~V~~r~g~~~~i~~~dL~vGDII~l~~ge~iPaD~iiL~ 178 (894)
++-...+++++..+..+++.+.++|+.+.++ ..+++|+++||++++|++++|+|||+|+|++||.||||++|++
T Consensus 187 yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~ 266 (736)
T 3rfu_A 187 YFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQE 266 (736)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEECS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEHHHCCCCCEEEECCCCCCCCCEEEEE
T ss_conf 89999999999999999999999999999999883399889999529989998776689898899879975156379997
Q ss_pred ECCCCCCEEEEECCCCCCCCCEEECCCCCCCCCCCHHHHCCCEEEEEEECCCCCCEEEEEEEEECCEEEECCCCCEEECC
Q ss_conf 03899708997004689886266314444798994444303606999527999940579999988903105999726305
Q 002671 179 SSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRD 258 (894)
Q Consensus 179 ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~~~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rg 258 (894)
|.++||||+|||||.|+.|.+.+.. |+||++.+|.
T Consensus 267 -----G~~~VDES~LTGES~Pv~K~~gd~v---------------------------~~Gt~~~~G~------------- 301 (736)
T 3rfu_A 267 -----GRSFVDESMVTGEPIPVAKEASAKV---------------------------IGATINQTGS------------- 301 (736)
T ss_dssp -----SCEEEECSSSTTCSSCEEECTTCEE---------------------------CTTCEEESCC-------------
T ss_pred -----CCEEEEECCCCCCCCCEEECCCCCC---------------------------CCCEEECCCE-------------
T ss_conf -----8667651235786142783168867---------------------------7864861450-------------
Q ss_pred EEEECCCEEEEEEEEECCCCHHH---HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 07514894999999843630101---036899997655889998999999999999999999977522025689732247
Q 002671 259 SKLRNTAHVYGSVIFTGHDSKVM---QNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLK 335 (894)
Q Consensus 259 s~l~nt~~~~giVv~tG~~Tk~~---~~~~~~~~k~s~l~~~~~~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~yl~ 335 (894)
+.+.|++||.+|.++ ++...++.+++++++.++++..+++++.++++++.+++|.++.... .|
T Consensus 302 --------~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~~~---~~--- 367 (736)
T 3rfu_A 302 --------FVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGPQP---AL--- 367 (736)
T ss_dssp --------CCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSS---ST---
T ss_pred --------EEEEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---HH---
T ss_conf --------9999998412259999999999743268979999999999999999999999999999967873---29---
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCC
Q ss_conf 88886435999986558989999999860123220267799999999998830123544689997178426410001240
Q 002671 336 PKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQV 415 (894)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~i~i~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~e~LG~v 415 (894)
...+.+++.+++.+|||+|+++++++...+..++ +++++++|+++.+|.||++
T Consensus 368 -----------------~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~----------a~~gilvk~~~alE~l~~v 420 (736)
T 3rfu_A 368 -----------------SYGLIAAVSVLIIACPCALGLATPMSIMVGVGKG----------AQSGVLIKNAEALERMEKV 420 (736)
T ss_dssp -----------------THHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHH----------HHTTEEESCHHHHHHHTSC
T ss_pred -----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHCCEEECHHHHHHHHCCC
T ss_conf -----------------9999998774877324278888999999999997----------5151332337899986279
Q ss_pred EEEEECCCCCEEECCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCC
Q ss_conf 59986498830211027999999383037896078999998621012565443210014799973101000036999863
Q 002671 416 DTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDF 495 (894)
Q Consensus 416 ~~I~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 495 (894)
++||||||||||+|+|.+.++...+.. +
T Consensus 421 ~~i~fDKTGTLT~g~~~v~~i~~~~~~------~---------------------------------------------- 448 (736)
T 3rfu_A 421 NTLVVDKTGTLTEGHPKLTRIVTDDFV------E---------------------------------------------- 448 (736)
T ss_dssp CEEEECCBTTTBCSSCEEEEEEESSSC------H----------------------------------------------
T ss_pred CEEEEECCCCCCCCCEEEEEEEECCCC------H----------------------------------------------
T ss_conf 999981898875895279999834887------7----------------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEECC
Q ss_conf 23468974355000166788899826799999998310304611358999736641896199999999988959997739
Q 002671 496 KRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQ 575 (894)
Q Consensus 496 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~lC~t~~~~~~~~~~~~~y~~~sp~e~Al~~~a~~~g~~~~~r~~ 575 (894)
.+++...+.+ ++.++||.+.|++++++..|+.+.
T Consensus 449 ----------------------------~~~l~~aa~l--------------e~~s~hPla~Aiv~~a~~~~~~~~---- 482 (736)
T 3rfu_A 449 ----------------------------DNALALAAAL--------------EHQSEHPLANAIVHAAKEKGLSLG---- 482 (736)
T ss_dssp ----------------------------HHHHHHHHHH--------------HHSSCCHHHHHHHHHHHTTCCCCC----
T ss_pred ----------------------------HHHHHHHHHH--------------HHCCCCHHHHHHHHHHHHCCCCCC----
T ss_conf ----------------------------8999999998--------------622899289999999996599866----
Q ss_pred CEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHH
Q ss_conf 85899941899898722699997742588898147999993899299997364035368530174211999999999998
Q 002671 576 SSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYG 655 (894)
Q Consensus 576 ~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~ 655 (894)
...+|++.+++.. ... .+|. .+.+|+++.+.+.... ........++++
T Consensus 483 -----------------------~~~~f~~~~g~gv-~~~-~~g~--~~~~G~~~~~~~~~~~-----~~~~~~~~~~~~ 530 (736)
T 3rfu_A 483 -----------------------SVEAFEAPTGKGV-VGQ-VDGH--HVAIGNARLMQEHGGD-----NAPLFEKADELR 530 (736)
T ss_dssp -----------------------CCSCCCCCTTTEE-EEC-SSSS--CEEEESHHHHHHHCCC-----CHHHHHHHHHHH
T ss_pred -----------------------CCCCCCCCCCCEE-EEE-ECCE--EEEECCHHHHHHCCCC-----HHHHHHHHHHHH
T ss_conf -----------------------7543202488658-999-9998--9997389999873997-----167899999998
Q ss_pred HCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHCCC
Q ss_conf 53782889999717988999999999998852100889999999985121617987663124356783999999997499
Q 002671 656 EAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGL 735 (894)
Q Consensus 656 ~~GlR~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~~~ieD~lr~~v~e~I~~L~~agI 735 (894)
.+|+|++++|+ |..++|+++++|++|++++++|+.|+++||
T Consensus 531 ~~G~~vl~va~---------------------------------------d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi 571 (736)
T 3rfu_A 531 GKGASVMFMAV---------------------------------------DGKTVALLVVEDPIKSSTPETILELQQSGI 571 (736)
T ss_dssp HTTCEEEEEEE---------------------------------------TTEEEEEEEEECCBCSSHHHHHHHHHHHTC
T ss_pred HCCCEEEEEEE---------------------------------------CCEEEEEEEEECCCHHHHHHHHHHHHHCCC
T ss_conf 56986999987---------------------------------------998999998503220309999999998799
Q ss_pred EEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC
Q ss_conf 39999298577899999865644458438999358920367999999997699999846653210389987469999183
Q 002671 736 KIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGK 815 (894)
Q Consensus 736 kv~ilTGD~~~tA~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~ 815 (894)
+++|+|||+..+|..+|+++|+..
T Consensus 572 ~v~mlTGd~~~~a~~ia~~lgi~~-------------------------------------------------------- 595 (736)
T 3rfu_A 572 EIVMLTGDSKRTAEAVAGTLGIKK-------------------------------------------------------- 595 (736)
T ss_dssp EEEEECSSCHHHHHHHHHHHTCCC--------------------------------------------------------
T ss_pred EEEEECCCCHHHHHHHHHHCCCCE--------------------------------------------------------
T ss_conf 499987989899999999859987--------------------------------------------------------
Q ss_pred HHHHHCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHCHHHHHHCCCCEEECC
Q ss_conf 0425020579999999752069079992790219999999861299989999399220999886891098338
Q 002671 816 TLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISG 888 (894)
Q Consensus 816 ~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lk~~~~~~vl~iGDG~ND~~ml~~AdvGI~i~g 888 (894)
++++++|+||..+|+.+++ .++.|+|+|||.||++||++||+||+|++
T Consensus 596 ------------------------v~a~~~P~~K~~~v~~l~~-~g~~V~~vGDG~ND~paL~~AdvGIAmg~ 643 (736)
T 3rfu_A 596 ------------------------VVAEIMPEDKSRIVSELKD-KGLIVAMAGDGVNDAPALAKADIGIAMGT 643 (736)
T ss_dssp ------------------------EECSCCHHHHHHHHHHHHH-HSCCEEEEECSSTTHHHHHHSSEEEEESS
T ss_pred ------------------------EEEECCHHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHCCEEEEECC
T ss_conf ------------------------9970699999999999996-69989999898576999986997799478
No 7
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=1.00 E-value=1 Score=554.49 Aligned_cols=437 Identities=19% Similarity=0.239 Sum_probs=352.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCHHHHC------CCEEEEEECCCEEEEEECCCCCCCCEEEEECCCCCCCEEEEEEECCC
Q ss_conf 789999999899999999840036540------41389995797199952124644829995049603850999620389
Q 002671 109 LAIVVGVSMAKEALEDWRRFMQDKEVN------ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYE 182 (894)
Q Consensus 109 l~~v~~is~~~~~~~d~~r~k~~~~~n------~~~~~V~~r~g~~~~i~~~dL~vGDII~l~~ge~iPaD~iiL~ss~~ 182 (894)
.++++++..+.++++++.++|+.+.++ ..+++|+ |||++++|++++|+|||||.|++||.||||++|++
T Consensus 177 ~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~-r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~---- 251 (723)
T 3j09_A 177 SVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVI-RDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE---- 251 (723)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEE-ETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEE----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEEEEEEEEE----
T ss_conf 9999999999999999999999999988872699756999-89989998989979998999889998856799997----
Q ss_pred CCCEEEEECCCCCCCCCEEECCCCCCCCCCCHHHHCCCEEEEEEECCCCCCEEEEEEEEECCEEEECCCCCEEECCEEEE
Q ss_conf 97089970046898862663144447989944443036069995279999405799999889031059997263050751
Q 002671 183 DGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLR 262 (894)
Q Consensus 183 ~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~~~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~ 262 (894)
|.|+||||+|||||.|+.|.+.+.. |+||.+.+|.
T Consensus 252 -G~~~VdeS~LTGES~pv~K~~g~~v---------------------------~~Gt~~~~g~----------------- 286 (723)
T 3j09_A 252 -GESYVDESMISGEPVPVLKSKGDEV---------------------------FGATINNTGV----------------- 286 (723)
T ss_dssp -CCEEEECHHHHCCSSCEEECTTCEE---------------------------CTTCEECSSC-----------------
T ss_pred -CCEEEECCCCCCCCCCEEECCCCEE---------------------------CCCEEEECCC-----------------
T ss_conf -7768860001388764663689823---------------------------0416970672-----------------
Q ss_pred CCCEEEEEEEEECCCC---HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 4894999999843630---1010368999976558899989999999999999999999775220256897322478888
Q 002671 263 NTAHVYGSVIFTGHDS---KVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKET 339 (894)
Q Consensus 263 nt~~~~giVv~tG~~T---k~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~yl~~~~~ 339 (894)
+.+.|++||.+| ++.++...++.+++++++.+++++.+++++.++++++.++.+.++... +|
T Consensus 287 ----~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~----~~------- 351 (723)
T 3j09_A 287 ----LKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHA----PL------- 351 (723)
T ss_dssp ----EEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSSTTC----TT-------
T ss_pred ----EEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC----CH-------
T ss_conf ----999999846743999999999975346983899999999999999999999999999985688----69-------
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEE
Q ss_conf 64359999865589899999998601232202677999999999988301235446899971784264100012405998
Q 002671 340 DVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTIL 419 (894)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~i~i~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~e~LG~v~~I~ 419 (894)
...+.+++.+++.+|||+|+++++++...+..++ +++++++|+++.+|.||++++||
T Consensus 352 -------------~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~----------a~~gilvk~~~~lE~lg~v~~i~ 408 (723)
T 3j09_A 352 -------------LFAFTTLIAVLVVACPCAFGLATPTALTVGMGKG----------AELGILIKNADALEVAEKVTAVI 408 (723)
T ss_dssp -------------CCSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTTCEESSTTHHHHGGGCCEEE
T ss_pred -------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHCCEEEECHHHHHHHHCCCEEE
T ss_conf -------------9999999999975026789999999999999999----------98893894828998762498999
Q ss_pred ECCCCCEEECCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCC
Q ss_conf 64988302110279999993830378960789999986210125654432100147999731010000369998632346
Q 002671 420 SDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRI 499 (894)
Q Consensus 420 ~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 499 (894)
||||||||+|+|.+.++...+.. +
T Consensus 409 fDKTGTLT~g~~~v~~~~~~~~~------~-------------------------------------------------- 432 (723)
T 3j09_A 409 FDKTGTLTKGKPEVTDLVPLNGD------E-------------------------------------------------- 432 (723)
T ss_dssp EEHHHHTSCSCCEEEEEEESSSC------H--------------------------------------------------
T ss_pred ECCCCCCCCCCEEEEEEEECCCC------H--------------------------------------------------
T ss_conf 84777552696279999807999------8--------------------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEECCCEEE
Q ss_conf 89743550001667888998267999999983103046113589997366418961999999999889599977398589
Q 002671 500 KGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVF 579 (894)
Q Consensus 500 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~lC~t~~~~~~~~~~~~~y~~~sp~e~Al~~~a~~~g~~~~~r~~~~~~ 579 (894)
.+++...+.+. +.+.||++.|++++++..|+.+...
T Consensus 433 ------------------------~~~l~~aa~~e--------------~~s~hP~~~Ai~~~a~~~~~~~~~~------ 468 (723)
T 3j09_A 433 ------------------------RELLRLAAIAE--------------RRSEHPIAEAIVKKALEHGIELGEP------ 468 (723)
T ss_dssp ------------------------HHHHHHHHHHH--------------TTCCSHHHHHHHHHHHHTTCCCCSC------
T ss_pred ------------------------HHHHHHHHHHH--------------CCCCCCHHHHHHHHHHHCCCCCCCC------
T ss_conf ------------------------99999999985--------------0499954289999998549985786------
Q ss_pred EEECCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 99418998987226999977425888981479999938992999973640353685301742119999999999985378
Q 002671 580 IRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGL 659 (894)
Q Consensus 580 i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Gl 659 (894)
..++ +...+. +.. ..+.+|+++.+.+.. ..........+++++.+|+
T Consensus 469 -------------~~~~--------~~~g~g-~~~-------~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~g~ 515 (723)
T 3j09_A 469 -------------EKVE--------VIAGEG-VVA-------DGILVGNKRLMEDFG----VAVSNEVELALEKLEREAK 515 (723)
T ss_dssp -------------CCCE--------EETTTE-EEE-------TTEEEECHHHHHHTT----CCCCHHHHHHHHHHHTTTC
T ss_pred -------------CCEE--------EECCCC-EEE-------EEEEECCHHHHHHCC----CCCCHHHHHHHHHHHHCCC
T ss_conf -------------4459--------966981-699-------999977899997549----9860899999999985598
Q ss_pred EEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCEEEE
Q ss_conf 28899997179889999999999988521008899999999851216179876631243567839999999974993999
Q 002671 660 RTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWV 739 (894)
Q Consensus 660 R~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~~~ieD~lr~~v~e~I~~L~~agIkv~i 739 (894)
|++++|+ |++++|+++++|++|++++++|+.|+++||++||
T Consensus 516 ~~~~va~---------------------------------------~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~ 556 (723)
T 3j09_A 516 TAVIVAR---------------------------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGM 556 (723)
T ss_dssp EEEEEEE---------------------------------------TTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEE
T ss_pred EEEEEEE---------------------------------------CCEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEE
T ss_conf 2899978---------------------------------------9999999960687525699999999977997999
Q ss_pred ECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHH
Q ss_conf 92985778999998656444584389993589203679999999976999998466532103899874699991830425
Q 002671 740 LTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAY 819 (894)
Q Consensus 740 lTGD~~~tA~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~ 819 (894)
+|||+..+|..+|+++|+.
T Consensus 557 ~TGd~~~~a~~ia~~lgi~------------------------------------------------------------- 575 (723)
T 3j09_A 557 ITGDNWRSAEAISRELNLD------------------------------------------------------------- 575 (723)
T ss_dssp ECSSCHHHHHHHHHHHTCS-------------------------------------------------------------
T ss_pred ECCCCHHHHHHHHHHCCCC-------------------------------------------------------------
T ss_conf 9998989999999985993-------------------------------------------------------------
Q ss_pred HCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHCHHHHHHCCCCEEEC
Q ss_conf 02057999999975206907999279021999999986129998999939922099988689109833
Q 002671 820 ALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS 887 (894)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lk~~~~~~vl~iGDG~ND~~ml~~AdvGI~i~ 887 (894)
.++++++|+||..+|+.+++ . +.|+|+|||.||++||++||+||+|+
T Consensus 576 -------------------~~~~~~~P~~K~~~v~~l~~-~-~~v~~vGDg~ND~~al~~A~vgiamg 622 (723)
T 3j09_A 576 -------------------LVIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVG 622 (723)
T ss_dssp -------------------EEECSCCTTCHHHHHHHHTT-T-CCEEEEECSSTTHHHHHHSSEEEECC
T ss_pred -------------------EEECCCCHHHHHHHHHHHHC-C-CEEEEEECCHHHHHHHHHCCEEEEEC
T ss_conf -------------------89926899999999999834-9-93999989823099995499879967
No 8
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=1.00 E-value=1 Score=549.62 Aligned_cols=437 Identities=19% Similarity=0.243 Sum_probs=351.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCHHHH------CCCEEEEEECCCEEEEEECCCCCCCCEEEEECCCCCCCEEEEEEECCC
Q ss_conf 78999999989999999984003654------041389995797199952124644829995049603850999620389
Q 002671 109 LAIVVGVSMAKEALEDWRRFMQDKEV------NARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYE 182 (894)
Q Consensus 109 l~~v~~is~~~~~~~d~~r~k~~~~~------n~~~~~V~~r~g~~~~i~~~dL~vGDII~l~~ge~iPaD~iiL~ss~~ 182 (894)
.++++++..+.++++++.++|+.+.+ ...+++|+ |||++++|++++|+|||||.|++||.||||++|++
T Consensus 99 ~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~-r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~---- 173 (645)
T 3j08_A 99 SVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVI-RDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE---- 173 (645)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEE-ETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEE----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEEEEEEEEE----
T ss_conf 9999999999999999999999999999861799979999-99979998899979899999889998866899998----
Q ss_pred CCCEEEEECCCCCCCCCEEECCCCCCCCCCCHHHHCCCEEEEEEECCCCCCEEEEEEEEECCEEEECCCCCEEECCEEEE
Q ss_conf 97089970046898862663144447989944443036069995279999405799999889031059997263050751
Q 002671 183 DGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLR 262 (894)
Q Consensus 183 ~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~~~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~ 262 (894)
|.|+||||+|||||.|+.|.+.+.. |+||.+.+|.
T Consensus 174 -G~~~VdeS~LTGES~Pv~K~~g~~v---------------------------~~Gt~~~~g~----------------- 208 (645)
T 3j08_A 174 -GESYVDESMISGEPVPVLKSKGDEV---------------------------FGATINNTGV----------------- 208 (645)
T ss_dssp -CCEEEECHHHHCCSSCEEECTTCEE---------------------------CTTCEECSSC-----------------
T ss_pred -CCEEEECCCCCCCCCCEECCCCCEE---------------------------ECCEEEECCC-----------------
T ss_conf -8689980224699876560899974---------------------------1667982572-----------------
Q ss_pred CCCEEEEEEEEECCCC---HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 4894999999843630---1010368999976558899989999999999999999999775220256897322478888
Q 002671 263 NTAHVYGSVIFTGHDS---KVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKET 339 (894)
Q Consensus 263 nt~~~~giVv~tG~~T---k~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~yl~~~~~ 339 (894)
+.+.|++||.+| ++.+....++.+++++++.+++++.+++++.++++++.++.+.++... +|.
T Consensus 209 ----~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~----~~~------ 274 (645)
T 3j08_A 209 ----LKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHA----PLL------ 274 (645)
T ss_dssp ----EEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCSC----SCC------
T ss_pred ----EEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC----CHH------
T ss_conf ----999999727745999999999973146985899999999999999999999999999995698----699------
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEE
Q ss_conf 64359999865589899999998601232202677999999999988301235446899971784264100012405998
Q 002671 340 DVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTIL 419 (894)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~i~i~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~e~LG~v~~I~ 419 (894)
..+.+++.+++.+|||+|+++++++...+..++ +++++++|+++.+|.||++++||
T Consensus 275 --------------~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~----------a~~gilvk~~~~lE~lg~v~~i~ 330 (645)
T 3j08_A 275 --------------FAFTTLIAVLVVACPCAFGLATPTALTVGMGKG----------AELGILIKNADALEVAEKVTAVI 330 (645)
T ss_dssp --------------CTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTCCCCSSTTHHHHGGGCCEEE
T ss_pred --------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHCCEEECCCHHHHHHHCCCEEE
T ss_conf --------------999999999998736689999999999999999----------97793766816999862799999
Q ss_pred ECCCCCEEECCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCC
Q ss_conf 64988302110279999993830378960789999986210125654432100147999731010000369998632346
Q 002671 420 SDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRI 499 (894)
Q Consensus 420 ~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 499 (894)
||||||||+|+|.+.++...+.. +
T Consensus 331 fDKTGTLT~~~~~v~~~~~~~~~------~-------------------------------------------------- 354 (645)
T 3j08_A 331 FDKTGTLTKGKPEVTDLVPLNGD------E-------------------------------------------------- 354 (645)
T ss_dssp EEGGGTSSSSCCEEEEEEESSSC------H--------------------------------------------------
T ss_pred ECCCCCCCCCCEEEEEEEECCCC------H--------------------------------------------------
T ss_conf 86866655897079999817999------7--------------------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEECCCEEE
Q ss_conf 89743550001667888998267999999983103046113589997366418961999999999889599977398589
Q 002671 500 KGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVF 579 (894)
Q Consensus 500 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~lC~t~~~~~~~~~~~~~y~~~sp~e~Al~~~a~~~g~~~~~r~~~~~~ 579 (894)
.+++...+.|. +.+.||++.|++++++..|+.....
T Consensus 355 ------------------------~~~l~~aa~~e--------------~~s~hPla~Aiv~~a~~~g~~~~~~------ 390 (645)
T 3j08_A 355 ------------------------RELLRLAAIAE--------------RRSEHPIAEAIVKKALEHGIELGEP------ 390 (645)
T ss_dssp ------------------------HHHHHHHHHHH--------------TTCCSHHHHHHHHHHHHTTCCCCSC------
T ss_pred ------------------------HHHHHHHHHHH--------------HCCCCHHHHHHHHHHHHCCCCCCCC------
T ss_conf ------------------------99999999975--------------1588746799999999659986786------
Q ss_pred EEECCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 99418998987226999977425888981479999938992999973640353685301742119999999999985378
Q 002671 580 IRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGL 659 (894)
Q Consensus 580 i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Gl 659 (894)
.. |.+...+. +.. ..+.+|+++.+.+. +....+.....+++++.+|+
T Consensus 391 -------------~~--------~~~~~g~g-~~~-------~~v~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~g~ 437 (645)
T 3j08_A 391 -------------EK--------VEVIAGEG-VVA-------DGILVGNKRLMEDF----GVAVSNEVELALEKLEREAK 437 (645)
T ss_dssp -------------CC--------CEEETTTE-EEE-------TTEEEECHHHHHHT----TCCCCHHHHHHHHHHHTTTC
T ss_pred -------------CC--------EEEECCCC-EEE-------EEEEECCHHHHHHC----CCCCCHHHHHHHHHHHHCCC
T ss_conf -------------53--------59965884-699-------99998879999754----98751889999999985598
Q ss_pred EEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCEEEE
Q ss_conf 28899997179889999999999988521008899999999851216179876631243567839999999974993999
Q 002671 660 RTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWV 739 (894)
Q Consensus 660 R~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~~~ieD~lr~~v~e~I~~L~~agIkv~i 739 (894)
|++++|+ |+.++|+++++|++|++++++|+.|+++||++||
T Consensus 438 ~~l~va~---------------------------------------~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~ 478 (645)
T 3j08_A 438 TAVIVAR---------------------------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGM 478 (645)
T ss_dssp CCEEEEE---------------------------------------TTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEE
T ss_pred EEEEEEE---------------------------------------CCEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEE
T ss_conf 3899988---------------------------------------9999999993487656799999999977997999
Q ss_pred ECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHH
Q ss_conf 92985778999998656444584389993589203679999999976999998466532103899874699991830425
Q 002671 740 LTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAY 819 (894)
Q Consensus 740 lTGD~~~tA~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~ 819 (894)
+|||+..+|..+|+++|+.
T Consensus 479 ~TGd~~~~a~~ia~~lgi~------------------------------------------------------------- 497 (645)
T 3j08_A 479 ITGDNWRSAEAISRELNLD------------------------------------------------------------- 497 (645)
T ss_dssp ECSSCHHHHHHHHHHHTCS-------------------------------------------------------------
T ss_pred EECCCHHHHHHHHHHCCCC-------------------------------------------------------------
T ss_conf 9088879999999983997-------------------------------------------------------------
Q ss_pred HCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHCHHHHHHCCCCEEEC
Q ss_conf 02057999999975206907999279021999999986129998999939922099988689109833
Q 002671 820 ALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGIS 887 (894)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lk~~~~~~vl~iGDG~ND~~ml~~AdvGI~i~ 887 (894)
.++++++|+||..+++.+++ . +.|+|+|||.||++|+++||+||+|+
T Consensus 498 -------------------~~~~~~~P~~K~~~v~~l~~-~-~~v~~vGDg~ND~~al~~A~vgiamg 544 (645)
T 3j08_A 498 -------------------LVIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVG 544 (645)
T ss_dssp -------------------EEECSCCTTCHHHHHHHHTT-T-CCEEEEECSSSCHHHHHHSSEEEEEC
T ss_pred -------------------EEEEECCHHHHHHHHHHHHH-C-CEEEEEECCHHHHHHHHHCCEEEEEC
T ss_conf -------------------89983787768999999860-9-95999969776899997599889948
No 9
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=1.00 E-value=1 Score=189.90 Aligned_cols=101 Identities=25% Similarity=0.446 Sum_probs=89.5
Q ss_pred CCEEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH
Q ss_conf 61798766312435678399999999749939999298577899999865644458438999358920367999999997
Q 002671 706 DLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKD 785 (894)
Q Consensus 706 dl~~lG~~~ieD~lr~~v~e~I~~L~~agIkv~ilTGD~~~tA~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 (894)
+-.+.|.+.+.|+++|++.++|+.|++.|++++|+|||+..++..++..+|+..
T Consensus 124 ~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-------------------------- 177 (263)
T 2yj3_A 124 NGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE-------------------------- 177 (263)
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCEEE
Q ss_conf 69999984665321038998746999918304250205799999997520690799927902199999998612999899
Q 002671 786 NILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTL 865 (894)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lk~~~~~~vl 865 (894)
+|+.+.|+.|..+++.++. .+..++
T Consensus 178 ------------------------------------------------------~f~~~~p~~k~~~~~~l~~-~~~~~~ 202 (263)
T 2yj3_A 178 ------------------------------------------------------YYSNLSPEDKVRIIEKLKQ-NGNKVL 202 (263)
Q ss_pred EECCCHHCHHHHHHCCCCEEEC
Q ss_conf 9939922099988689109833
Q 002671 866 AIGDGANDVGMIQEADIGIGIS 887 (894)
Q Consensus 866 ~iGDG~ND~~ml~~AdvGI~i~ 887 (894)
|||||.||++|++.|++||++.
T Consensus 203 ~VGD~~~D~~aa~~Agv~va~g 224 (263)
T 2yj3_A 203 MIGDGVNDAAALALADVSVAMG 224 (263)
No 10
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=1.00 E-value=1 Score=156.74 Aligned_cols=238 Identities=22% Similarity=0.293 Sum_probs=172.2
Q ss_pred CCCCEEEECCCCCCCCCCCEEEEECCCCCEEECCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCC
Q ss_conf 99971784264100012405998649883021102799999938303789607899999862101256544321001479
Q 002671 397 SGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKN 476 (894)
Q Consensus 397 ~~~~~~~~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (894)
+++++++|+++.+|.+++++.|+||||||||.+.+.+..+...+. ++
T Consensus 14 ~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~------~~--------------------------- 60 (287)
T 3a1c_A 14 AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG------DE--------------------------- 60 (287)
T ss_dssp CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS------CH---------------------------
T ss_pred HHCCEEEECCHHHHHHHCCCEEEEECCCCCCCCCEEEEEEEECCC------CH---------------------------
T ss_conf 879979968089988536999999689988289779999981799------99---------------------------
Q ss_pred CCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCEEEECCCHHH
Q ss_conf 99731010000369998632346897435500016678889982679999999831030461135899973664189619
Q 002671 477 SGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDE 556 (894)
Q Consensus 477 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~lC~t~~~~~~~~~~~~~y~~~sp~e 556 (894)
. +++.. |..+ + ..+.||.+
T Consensus 61 --------------------------------------------~---~~l~~---~~~~--e---------~~s~hp~~ 79 (287)
T 3a1c_A 61 --------------------------------------------R---ELLRL---AAIA--E---------RRSEHPIA 79 (287)
T ss_dssp --------------------------------------------H---HHHHH---HHHH--T---------TTCCSHHH
T ss_pred --------------------------------------------H---HHHHH---HHHH--H---------HCCCCHHH
T ss_conf --------------------------------------------9---99999---9997--5---------21799799
Q ss_pred HHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHH
Q ss_conf 99999999889599977398589994189989872269999774258889814799999389929999736403536853
Q 002671 557 AAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRL 636 (894)
Q Consensus 557 ~Al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~ 636 (894)
.|+..+++.+|+..... ..+..+. . +++.. ..+.+|.++.+....
T Consensus 80 ~a~~~~~~~~g~~~~~~-------------------~~~~~~~-------G--~~~~~-------~~~~~g~~~~~~~~~ 124 (287)
T 3a1c_A 80 EAIVKKALEHGIELGEP-------------------EKVEVIA-------G--EGVVA-------DGILVGNKRLMEDFG 124 (287)
T ss_dssp HHHHHHHHHTTCCCCCC-------------------SCEEEET-------T--TEEEE-------TTEEEECHHHHHHTT
T ss_pred HHHHHHHHHCCCCCCCC-------------------CCCEEEC-------C--CCEEE-------EEEEECCHHHHHHCC
T ss_conf 99999998659985555-------------------4414624-------8--87288-------999988999998659
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEEEEEEEC
Q ss_conf 01742119999999999985378288999971798899999999999885210088999999998512161798766312
Q 002671 637 SKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVE 716 (894)
Q Consensus 637 ~~~~~~~~~~~~~~l~~~~~~GlR~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~l~~~~~~iE~dl~~lG~~~ie 716 (894)
. ..........+.+..+|.+++.+++ +..+++.+...
T Consensus 125 ~----~~~~~~~~~~~~~~~~g~~~i~~~~---------------------------------------d~~~~~~~~~~ 161 (287)
T 3a1c_A 125 V----AVSNEVELALEKLEREAKTAVIVAR---------------------------------------NGRVEGIIAVS 161 (287)
T ss_dssp C----CCCHHHHHHHHHHHHTTCEEEEEEE---------------------------------------TTEEEEEEEEE
T ss_pred C----CCCHHHHHHHHHHHHCCCEEEEEEE---------------------------------------CCEEEEEEEEC
T ss_conf 9----7507789999998747975999999---------------------------------------99899999954
Q ss_pred CCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 43567839999999974993999929857789999986564445843899935892036799999999769999984665
Q 002671 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (894)
Q Consensus 717 D~lr~~v~e~I~~L~~agIkv~ilTGD~~~tA~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (894)
++++|++.++++.|+++|++++|+||+....+..++..+|+..
T Consensus 162 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~------------------------------------- 204 (287)
T 3a1c_A 162 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL------------------------------------- 204 (287)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-------------------------------------
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCE-------------------------------------
T ss_conf 5361418999999997798599990989899999999809813-------------------------------------
Q ss_pred HHHCCCCCCCCEEEEEECCHHHHHCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHCHHH
Q ss_conf 32103899874699991830425020579999999752069079992790219999999861299989999399220999
Q 002671 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGM 876 (894)
Q Consensus 797 ~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lk~~~~~~vl~iGDG~ND~~m 876 (894)
.|..+.|..|...++.+.. . ..++||||+.||+.|
T Consensus 205 -------------------------------------------~f~~i~~~~K~~~~~~l~~-~-~~~~~vGDs~~Di~~ 239 (287)
T 3a1c_A 205 -------------------------------------------VIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPA 239 (287)
T ss_dssp -------------------------------------------EECSCCTTCHHHHHHHHTT-T-CCEEEEECTTTCHHH
T ss_pred -------------------------------------------EEEECCHHHHHHHHHHHHC-C-CEEEEEECCHHHHHH
T ss_conf -------------------------------------------1100581779999999825-8-839999797778999
Q ss_pred HHHCCCCEEECC
Q ss_conf 886891098338
Q 002671 877 IQEADIGIGISG 888 (894)
Q Consensus 877 l~~AdvGI~i~g 888 (894)
.+.|+++|++..
T Consensus 240 a~~ag~~v~~~~ 251 (287)
T 3a1c_A 240 LAQADLGIAVGS 251 (287)
T ss_dssp HHHSSEEEEECC
T ss_pred HHHCCEEEEECC
T ss_conf 997895299678
Done!