BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002672
(894 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2IUK|A Chain A, Crystal Structure Of Soybean Lipoxygenase-D
pdb|2IUK|B Chain B, Crystal Structure Of Soybean Lipoxygenase-D
Length = 864
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/879 (42%), Positives = 511/879 (58%), Gaps = 43/879 (4%)
Query: 40 FKKGPKIRLGSV---PSNSVKAMADTAVSNGVTAVVTVRPPINPLTAGGQVIDDVEDLFS 96
F KG KI+ G+V P N + A T++ G ++ G VID
Sbjct: 5 FDKGQKIK-GTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLG 63
Query: 97 KSLQLELVSAKDENKPTISGNAKIKGVVVKDCEV-----------QYEAEFQVPVDFGEI 145
+++ ++L+SA + SGN K+ V + + + F+ FG
Sbjct: 64 RNISMQLISATQTDG---SGNGKVGKEVYLEKHLPTLPTLGARQDAFSIFFEWDASFGIP 120
Query: 146 GAILVVNEHALEMYLKDIVLDGLPS-GLVTITCESWVQPNTS-KDPRIFFTNKSYLPSKT 203
GA + N E +L + L+ +P+ G + C SWV S K RIFF N +YLPS T
Sbjct: 121 GAFYIKNFMTDEFFLVSVKLEDIPNHGTIEFVCNSWVYNFRSYKKNRIFFVNDTYLPSAT 180
Query: 204 PNGLQKLRYAELVNLRGNGEGERQKADRIYDYDVYNDLGDPDEDEELKRPVLGGKQ-HPY 262
P L K R E LRG+G G+R+ DRIYDYDVYNDLG+PD + RP+LGG +PY
Sbjct: 181 PAPLLKYRKEEFEVLRGDGTGKRKDFDRIYDYDVYNDLGNPDGGD--PRPILGGCSIYPY 238
Query: 263 PRRCRTGRPHCKTDEASEERVPSKSLIPISPYVPRDEEFSAIKETTFVIRGLFGQLRSLI 322
P R RTGR +TD SE+ P YVPRDE F +K + F+ G+ +I
Sbjct: 239 PLRVRTGRERTRTDPNSEK--------PGEVYVPRDENFGHLKSSDFLTYGIKSLSHDVI 290
Query: 323 PNLKAEF----VDTDGFPNFTEIDKLFREGVKI-KDAEFWKSLLPGFVEEIKDIGDFFLR 377
P K+ V + F +F ++ L+ G+K+ D S LP E + G+ L+
Sbjct: 291 PLFKSAIFQLRVTSSEFESFEDVRSLYEGGIKLPTDILSQISPLPALKEIFRTDGENVLQ 350
Query: 378 FTSPETFKXXXXXXXXXXXXXXXTLAGLNPCSIRLITEWPLKSSLDPKIYGPSESAITTE 437
F P K +AG+NP IR + E+P KS+LDP +YG S IT E
Sbjct: 351 FPPPHVAKVSKSGVMTDEEFAREVIAGVNPNVIRRLQEFPPKSTLDPTLYGDQTSTITKE 410
Query: 438 MIESEIKGCTTVKEALNQKKLFILDYHDLFLPYVEQVRELGDRTLYGSRTVFYLNPDGTL 497
+E + G T V+EAL+ ++LFILDY D F+PY+ ++ L Y +RT+ +L DGTL
Sbjct: 411 QLEINMGGVT-VEEALSTQRLFILDYQDAFIPYLTRINSLPTAKAYATRTILFLKDDGTL 469
Query: 498 RPLAIELTRPPMDGKPQWKQAFT--PSSDSTKSWLWKLAKAHVLAHDSGYHQLISHWLRT 555
+PLAIEL++P DG ++ P+++ S +W LAKAHV+ +DSGYHQL+SHWL T
Sbjct: 470 KPLAIELSKPHPDGDNLGPESIVVLPATEGVDSTIWLLAKAHVIVNDSGYHQLVSHWLNT 529
Query: 556 HCSVEPYAIAAHRQLSAMHPINRLLKPHFRYTMEINSLARQSLINAGGVIESTFLPGKYS 615
H +EP+AIA +R LS +HPI +LL PH+R T+ IN LARQSLINA G+IE +FLPGKYS
Sbjct: 530 HAVMEPFAIATNRHLSVLHPIYKLLYPHYRDTININGLARQSLINADGIIEKSFLPGKYS 589
Query: 616 MLLSSIIYDKQWRFDHQALPQDLISRGMAAKDPSSPHGLKLTIEDYPFAQDGLDLWDIIK 675
+ +SS +Y K W F HQALP DL+ RG+A +DPS+PHGL+L IEDYP+A DGL++WD IK
Sbjct: 590 IEMSSSVY-KNWVFTHQALPADLVKRGLAIEDPSAPHGLRLVIEDYPYAVDGLEIWDAIK 648
Query: 676 QWVTDYVSHYYPDPSLVESDEELQAWWTEIRTVGHGDKQDETWWPVLNSPKDLIDTITSI 735
WV +YVS YYP + V+ D ELQAWW E GHGD +++ WWP + +DLI + + I
Sbjct: 649 TWVHEYVSLYYPTDAAVQQDTELQAWWKEAVEKGHGDLKEKPWWPKKQTTEDLIQSCSII 708
Query: 736 VWVASGLHAAVNFGQYEYAAYFPNRPTIARANMPNEDPSDDEWQIFFERPEAALLTTFPN 795
VW AS LHAAVNFGQY Y NRPT+AR +P E E+ + P+ A L T
Sbjct: 709 VWTASALHAAVNFGQYPYGGLILNRPTLARRFIPAE--GTPEYDEMVKNPQKAYLRTITP 766
Query: 796 QRQATAVISVLDVLSAHSPDEDYLGKYMEPAWGEDKIIKGAFEKFQGRLMELKGIINLRN 855
+ + +SV+++LS H+ DE YLG+ P W DK AF++F +L ++G IN RN
Sbjct: 767 KFETLIDLSVIEILSRHASDEIYLGERETPNWTTDKKALEAFKRFGSKLTGIEGKINARN 826
Query: 856 ADKNLKNRHGAGSLPYELLMPLADKSGVTGKGVPYSISI 894
+D +L+NR G LPY LL + + G+T KG+P SISI
Sbjct: 827 SDPSLRNRTGPVQLPYTLLH-RSSEEGLTFKGIPNSISI 864
>pdb|2IUJ|A Chain A, Crystal Structure Of Soybean Lipoxygenase-B
Length = 853
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/829 (42%), Positives = 505/829 (60%), Gaps = 37/829 (4%)
Query: 85 GQVIDDVEDLFSKSLQLELVSA--KDENKPTISGNAKIKGVV----VKDCEVQYEAEFQV 138
G +D V L S S+ ++L+SA D K + ++G + + E Y+A+F
Sbjct: 43 GSALDTVTFLAS-SISIQLISATKADGGKGKVGKATNLRGKITLPTIGAKEEAYDAQFDW 101
Query: 139 PVDFGEIGAILVVNEHALEMYLKDIVLDGLPS-GLVTITCESWVQPNTS-KDPRIFFTNK 196
DFG GA + N E YLK ++L+ +P+ G + C SWV + K RIFF N
Sbjct: 102 DSDFGIPGAFYIKNYMQNEFYLKSLILEDIPNHGTIHFICNSWVYNSKHYKTDRIFFANN 161
Query: 197 SYLPSKTPNGLQKLRYAELVNLRGNGEGERQKADRIYDYDVYNDLGDPDEDEELKRPVLG 256
+YLPS+TP L K R EL N+RG+G GER++ DRIYDYDVYNDLGDPD+ E+ RPVLG
Sbjct: 162 TYLPSETPAPLVKYREEELKNVRGDGTGERKEWDRIYDYDVYNDLGDPDKGEKYARPVLG 221
Query: 257 GKQHPYPRRCRTGRPHCKTDEASEERVPSKSLIPISPYVPRDEEFSAIKETTFVIRGLFG 316
G PYPRR RTGR + D SE+ P + Y+PRDE F +K + F+ G+
Sbjct: 222 GSALPYPRRGRTGRGKTRKDPNSEK--PGDFV-----YLPRDEAFGHLKSSDFLAYGIKS 274
Query: 317 QLRSLIPNLKAEFVDTDG------FPNFTEIDKLFREGVKIKDAEFWKSL--LPGFVEEI 368
+ ++P L F DG F NF E+ KL+ GV + F ++ +P E
Sbjct: 275 VAQDVLPVLTDAF---DGNLLSLDFDNFAEVRKLYEGGVTLP-TNFLSNITPIPIIKELF 330
Query: 369 KDIGDFFLRFTSPETFKXXXXXXXXXXXXXXXTLAGLNPCSIRLITEWPLKSSLDPKIYG 428
+ G+ FL++ P+ + T+AGLNP I++I E+PL S LD + YG
Sbjct: 331 RTDGEQFLKYPPPKVMQVDKSAWMTDEEFARETIAGLNPNVIKIIEEFPLSSKLDTQAYG 390
Query: 429 PSESAITTEMIESEIKGCTTVKEALNQKKLFILDYHDLFLPYVEQVRELGDRTLYGSRTV 488
IT E +E + G T V++A+ KKLFILD+HD +PY+ ++ +T Y +RT+
Sbjct: 391 DHTCIITKEHLEPNLGGLT-VEQAIQNKKLFILDHHDYLIPYLRKINANTTKT-YATRTI 448
Query: 489 FYLNPDGTLRPLAIELTRPPMDGKPQW--KQAFTPSSDSTKSWLWKLAKAHVLAHDSGYH 546
F+L DGTL PLAIEL++P G+ + + PSS+ ++++W LAKA+V+ +D+ YH
Sbjct: 449 FFLKNDGTLTPLAIELSKPHPQGEEYGPVSEVYVPSSEGVEAYIWLLAKAYVVVNDACYH 508
Query: 547 QLISHWLRTHCSVEPYAIAAHRQLSAMHPINRLLKPHFRYTMEINSLARQSLINAGGVIE 606
Q+ISHWL TH VEP+ IA +R LS +HPI +LL PH+R TM INSLAR+SL+NA G+IE
Sbjct: 509 QIISHWLNTHAVVEPFVIATNRHLSVVHPIYKLLFPHYRDTMNINSLARKSLVNADGIIE 568
Query: 607 STFLPGKYSMLLSSIIYDKQWRFDHQALPQDLISRGMAAKDPSSPHGLKLTIEDYPFAQD 666
TFL G+YS+ +S++IY K W F QALP DL+ RG+A KDPS+PHG++L IEDYP+A D
Sbjct: 569 KTFLWGRYSLEMSAVIY-KDWVFTDQALPNDLVKRGVAVKDPSAPHGVRLLIEDYPYASD 627
Query: 667 GLDLWDIIKQWVTDYVSHYYPDPSLVESDEELQAWWTEIRTVGHGDKQDETWWPVLNSPK 726
GL++WD IK WV +YVS YY ++ D ELQAWW E+ VGHGD +D+ WW + + +
Sbjct: 628 GLEIWDAIKSWVEEYVSFYYKSDEELQKDPELQAWWKELVEVGHGDLKDKPWWQKMQTRE 687
Query: 727 DLIDTITSIVWVASGLHAAVNFGQYEYAAYFPNRPTIARANMPNEDPSDDEWQIFFERPE 786
+L++ +++W+AS LHAAVNFGQY Y NRPTI+R MP + E+ + PE
Sbjct: 688 ELVEASATLIWIASALHAAVNFGQYPYGGLILNRPTISRRFMPEK--GSPEYDALAKNPE 745
Query: 787 AALLTTFPNQRQATAVISVLDVLSAHSPDEDYLGKY-MEPAWGEDKIIKGAFEKFQGRLM 845
L T +++ ++++++LS H+ DE YLG+ W D AF++F L
Sbjct: 746 KEFLKTITGKKETLIDLTIIEILSRHASDEFYLGQRDGGDYWTSDAGPLEAFKRFGKNLE 805
Query: 846 ELKGIINLRNADKNLKNRHGAGSLPYELLMPLADKSGVTGKGVPYSISI 894
E++ + +N D+ L+NR+G +PY LL P + + G+T +G+P SISI
Sbjct: 806 EIEKKLIEKNNDETLRNRYGPAKMPYTLLYP-SSEEGLTFRGIPNSISI 853
>pdb|1IK3|A Chain A, Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydroperoxy-
9(Z),11(E)-Octadecadienoic Acid
pdb|1HU9|A Chain A, Lipoxygenase-3 (Soybean) Complex With 4-Hydroperoxy-2-
Methoxy-Phenol
pdb|1JNQ|A Chain A, Lipoxygenase-3 (Soybean) Complex With Epigallocathechin
(Egc)
pdb|1N8Q|A Chain A, Lipoxygenase In Complex With Protocatechuic Acid
pdb|1NO3|A Chain A, Refined Structure Of Soybean Lipoxygenase-3 With
4-nitrocatechol At 2.15 Angstrom Resolution
pdb|1RRH|A Chain A, Soybean Lipoxygenase (Lox-3) At Ambient Temperatures At
2.0 A Resolution
pdb|1RRL|A Chain A, Soybean Lipoxygenase (Lox-3) At 93k At 2.0 A Resolution
pdb|1RRL|B Chain B, Soybean Lipoxygenase (Lox-3) At 93k At 2.0 A Resolution
pdb|1LNH|A Chain A, Lipoxygenase-3(Soybean) Non-Heme Fe(Ii) Metalloprotein
Length = 857
Score = 624 bits (1609), Expect = e-179, Method: Compositional matrix adjust.
Identities = 346/827 (41%), Positives = 491/827 (59%), Gaps = 30/827 (3%)
Query: 85 GQVIDDVEDLFSKSLQLELVSA--KDENKPTISGNAK-IKGVV-----VKDCEVQYEAEF 136
G +D + +S+ L+L+SA D N G A ++G++ + + ++ F
Sbjct: 44 GSTLDTLTAFLGRSVSLQLISATKADANGKGKLGKATFLEGIITSLPTLGAGQSAFKINF 103
Query: 137 QVPVDFGEIGAILVVNEHALEMYLKDIVLDGLPS-GLVTITCESWV-QPNTSKDPRIFFT 194
+ G GA + N E +L + L+ +P+ G + C SW+ K RIFF
Sbjct: 104 EWDDGSGIPGAFYIKNFMQTEFFLVSLTLEDIPNHGSIHFVCNSWIYNAKLFKSDRIFFA 163
Query: 195 NKSYLPSKTPNGLQKLRYAELVNLRGNGEGERQKADRIYDYDVYNDLGDPDEDEELKRPV 254
N++YLPS+TP L K R EL NLRG+G GER++ +RIYDYDVYNDLGDPD+ E RPV
Sbjct: 164 NQTYLPSETPAPLVKYREEELHNLRGDGTGERKEWERIYDYDVYNDLGDPDKGENHARPV 223
Query: 255 LGGKQ-HPYPRRCRTGRPHCKTDEASEERVPSKSLIPISPYVPRDEEFSAIKETTFVIRG 313
LGG PYPRR RTGR + D SE R Y+PRDE F +K + F+ G
Sbjct: 224 LGGNDTFPYPRRGRTGRKPTRKDPNSESRSNDV-------YLPRDEAFGHLKSSDFLTYG 276
Query: 314 LFGQLRSLIPNLKAEF---VDTDGFPNFTEIDKLFREGVKIKDAEFWK-SLLPGFVEEIK 369
L ++++P L++ F F +F E+ L+ G+K+ K S LP E +
Sbjct: 277 LKSVSQNVLPLLQSAFDLNFTPREFDSFDEVHGLYSGGIKLPTDIISKISPLPVLKEIFR 336
Query: 370 DIGDFFLRFTSPETFKXXXXXXXXXXXXXXXTLAGLNPCSIRLITEWPLKSSLDPKIYGP 429
G+ L+F P+ + LAG+NP IR + ++P +S LD ++YG
Sbjct: 337 TDGEQALKFPPPKVIQVSKSAWMTDEEFAREMLAGVNPNLIRCLKDFPPRSKLDSQVYGD 396
Query: 430 SESAITTEMIESEIKGCTTVKEALNQKKLFILDYHDLFLPYVEQVRELGDRTLYGSRTVF 489
S IT E +E ++G T V EA+ K+LF+LD+HD +PY+ ++ + Y +RT+
Sbjct: 397 HTSQITKEHLEPNLEGLT-VDEAIQNKRLFLLDHHDPIMPYLRRINATSTKA-YATRTIL 454
Query: 490 YLNPDGTLRPLAIELT--RPPMDGKPQWKQAFTPSSDSTKSWLWKLAKAHVLAHDSGYHQ 547
+L DGTLRPLAIEL+ P D + Q F P+ + +S +W LAKA+V+ +DS YHQ
Sbjct: 455 FLKNDGTLRPLAIELSLPHPQGDQSGAFSQVFLPADEGVESSIWLLAKAYVVVNDSCYHQ 514
Query: 548 LISHWLRTHCSVEPYAIAAHRQLSAMHPINRLLKPHFRYTMEINSLARQSLINAGGVIES 607
L+SHWL TH VEP+ IA +R LS +HPI +LL PH+R TM IN LAR SL+N GGVIE
Sbjct: 515 LVSHWLNTHAVVEPFIIATNRHLSVVHPIYKLLHPHYRDTMNINGLARLSLVNDGGVIEQ 574
Query: 608 TFLPGKYSMLLSSIIYDKQWRFDHQALPQDLISRGMAAKDPSSPHGLKLTIEDYPFAQDG 667
TFL G+YS+ +S+++Y K W F QALP DLI RGMA +DPS PHG++L IEDYP+ DG
Sbjct: 575 TFLWGRYSVEMSAVVY-KDWVFTDQALPADLIKRGMAIEDPSCPHGIRLVIEDYPYTVDG 633
Query: 668 LDLWDIIKQWVTDYVSHYYPDPSLVESDEELQAWWTEIRTVGHGDKQDETWWPVLNSPKD 727
L++WD IK WV +YV YY + D ELQA W E+ VGHGDK++E WWP + + ++
Sbjct: 634 LEIWDAIKTWVHEYVFLYYKSDDTLREDPELQACWKELVEVGHGDKKNEPWWPKMQTREE 693
Query: 728 LIDTITSIVWVASGLHAAVNFGQYEYAAYFPNRPTIARANMPNEDPSDDEWQIFFERPEA 787
L++ I+W AS LHAAVNFGQY Y NRPT++R MP + + E++ + P+
Sbjct: 694 LVEACAIIIWTASALHAAVNFGQYPYGGLILNRPTLSRRFMPEKGSA--EYEELRKNPQK 751
Query: 788 ALLTTFPNQRQATAVISVLDVLSAHSPDEDYLGKYMEPAWGEDKIIKGAFEKFQGRLMEL 847
A L T + Q +SV+++LS H+ DE YLG+ P W D AF++F +L ++
Sbjct: 752 AYLKTITPKFQTLIDLSVIEILSRHASDEVYLGERDNPNWTSDTRALEAFKRFGNKLAQI 811
Query: 848 KGIINLRNADKNLKNRHGAGSLPYELLMPLADKSGVTGKGVPYSISI 894
+ ++ RN D+ L+NR G +PY LL+P + K G+T +G+P SISI
Sbjct: 812 ENKLSERNNDEKLRNRCGPVQMPYTLLLP-SSKEGLTFRGIPNSISI 857
>pdb|3PZW|A Chain A, Soybean Lipoxygenase-1 - Re-Refinement
Length = 839
Score = 620 bits (1598), Expect = e-177, Method: Compositional matrix adjust.
Identities = 348/837 (41%), Positives = 488/837 (58%), Gaps = 39/837 (4%)
Query: 78 INPLTAGGQVIDDVEDLFSKSLQLELVSAKDEN---KPTISGNAKIKGV-----VVKDCE 129
+NP G +D++ +S+ L+L+SA + K + + ++G+ + E
Sbjct: 22 VNP---DGSAVDNLNAFLGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGE 78
Query: 130 VQYEAEFQVPVDFGEIGAILVVNEHALEMYLKDIVLDGLPS-GLVTITCESWVQPNTS-- 186
+ F+ G GA + N +E +LK + L+ + + G + C SWV NT
Sbjct: 79 SAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVY-NTKLY 137
Query: 187 KDPRIFFTNKSYLPSKTPNGLQKLRYAELVNLRGNGEGERQKADRIYDYDVYNDLGDPDE 246
K RIFF N +Y+PS+TP L + R EL +LRGNG GER++ DRIYDYDVYNDLG+PD+
Sbjct: 138 KSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDK 197
Query: 247 DEELKRPVLGGKQ-HPYPRRCRTGRPHCKTDEASEERVPSKSLIPISPYVPRDEEFSAIK 305
E+L RPVLGG PYPRR RTGR TD +E++ YVPRDE +K
Sbjct: 198 SEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVF-------YVPRDENLGHLK 250
Query: 306 ETTFVIRGLFGQLRSLIPNLKAEFVDTDGFP----NFTEIDKLFREGVKI-KDAEFWKSL 360
+ G + + P ++ F D P +F ++ L+ G+K+ +D
Sbjct: 251 SKDALEIGTKSLSQIVQPAFESAF-DLKSTPIEFHSFQDVHDLYEGGIKLPRDVISTIIP 309
Query: 361 LPGFVEEIKDIGDFFLRFTSPETFKXXXXXXXXXXXXXXXTLAGLNPCSIRLITEWPLKS 420
LP E + G L+F P + +AG+NPC IR + E+P KS
Sbjct: 310 LPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKS 369
Query: 421 SLDPKIYGPSESAITTEMIESEIKGCTTVKEALNQKKLFILDYHDLFLPYVEQVRELGDR 480
+LDP IYG S IT + ++ + T+ EAL ++LF+LDYHD+F+PYV Q+ +L
Sbjct: 370 NLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSA 426
Query: 481 TLYGSRTVFYLNPDGTLRPLAIELTRPPMDG--KPQWKQAFTPSSDSTKSWLWKLAKAHV 538
Y +RT+ +L DGTL+P+AIEL+ P G Q P+ + +S +W LAKA+V
Sbjct: 427 KTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYV 486
Query: 539 LAHDSGYHQLISHWLRTHCSVEPYAIAAHRQLSAMHPINRLLKPHFRYTMEINSLARQSL 598
+ +DS YHQL+SHWL TH ++EP+ IA HR LS +HPI +LL PH+R M IN+LARQSL
Sbjct: 487 IVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSL 546
Query: 599 INAGGVIESTFLPGKYSMLLSSIIYDKQWRFDHQALPQDLISRGMAAKDPSSPHGLKLTI 658
INA G+IE+TFLP KYS+ +SS +Y K W F QALP DLI RG+A KDPS+PHG++L I
Sbjct: 547 INANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLI 605
Query: 659 EDYPFAQDGLDLWDIIKQWVTDYVSHYYPDPSLVESDEELQAWWTEIRTVGHGDKQDETW 718
EDYP+A DGL++W IK WV +YV YY V++D ELQ WW E GHGD +D+ W
Sbjct: 606 EDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPW 665
Query: 719 WPVLNSPKDLIDTITSIVWVASGLHAAVNFGQYEYAAYFPNRPTIARANMPNEDPSDDEW 778
WP L + +DL++ I+W+AS LHAAVNFGQY Y NRPT +R +P + E+
Sbjct: 666 WPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLP--EKGTPEY 723
Query: 779 QIFFERPEAALLTTFPNQRQATAVISVLDVLSAHSPDEDYLGKYMEPAWGEDKIIKGAFE 838
+ E A L T ++ +SV+++LS H+ DE YLG+ P W D AF+
Sbjct: 724 EEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQ 783
Query: 839 KFQGRLMELKGIINLRNADKNLK-NRHGAGSLPYELLMPLADKSGVTGKGVPYSISI 894
KF +L E++ + RN D +L+ NR G LPY LL P + + G+T +G+P SISI
Sbjct: 784 KFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYP-SSEEGLTFRGIPNSISI 839
>pdb|2SBL|B Chain B, The Three-Dimensional Structure Of An Arachidonic Acid 15-
Lipoxygenase
pdb|1F8N|A Chain A, Lipoxygenase-1 (Soybean) At 100k, New Refinement
pdb|1YGE|A Chain A, Lipoxygenase-1 (Soybean) At 100k
pdb|2SBL|A Chain A, The Three-Dimensional Structure Of An Arachidonic Acid 15-
Lipoxygenase
Length = 839
Score = 619 bits (1597), Expect = e-177, Method: Compositional matrix adjust.
Identities = 348/837 (41%), Positives = 487/837 (58%), Gaps = 39/837 (4%)
Query: 78 INPLTAGGQVIDDVEDLFSKSLQLELVSAKDEN---KPTISGNAKIKGV-----VVKDCE 129
+NP G +D++ +S+ L+L+SA + K + + ++G+ + E
Sbjct: 22 VNP---DGSAVDNLNAFLGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGE 78
Query: 130 VQYEAEFQVPVDFGEIGAILVVNEHALEMYLKDIVLDGLPS-GLVTITCESWVQPNTS-- 186
+ F+ G GA + N +E +LK + L+ + + G + C SWV NT
Sbjct: 79 SAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVY-NTKLY 137
Query: 187 KDPRIFFTNKSYLPSKTPNGLQKLRYAELVNLRGNGEGERQKADRIYDYDVYNDLGDPDE 246
K RIFF N +Y+PS+TP L R EL +LRGNG GER++ DRIYDYDVYNDLG+PD+
Sbjct: 138 KSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDK 197
Query: 247 DEELKRPVLGGKQ-HPYPRRCRTGRPHCKTDEASEERVPSKSLIPISPYVPRDEEFSAIK 305
E+L RPVLGG PYPRR RTGR TD +E++ YVPRDE +K
Sbjct: 198 SEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVF-------YVPRDENLGHLK 250
Query: 306 ETTFVIRGLFGQLRSLIPNLKAEFVDTDGFP----NFTEIDKLFREGVKI-KDAEFWKSL 360
+ G + + P ++ F D P +F ++ L+ G+K+ +D
Sbjct: 251 SKDALEIGTKSLSQIVQPAFESAF-DLKSTPIEFHSFQDVHDLYEGGIKLPRDVISTIIP 309
Query: 361 LPGFVEEIKDIGDFFLRFTSPETFKXXXXXXXXXXXXXXXTLAGLNPCSIRLITEWPLKS 420
LP E + G L+F P + +AG+NPC IR + E+P KS
Sbjct: 310 LPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKS 369
Query: 421 SLDPKIYGPSESAITTEMIESEIKGCTTVKEALNQKKLFILDYHDLFLPYVEQVRELGDR 480
+LDP IYG S IT + ++ + T+ EAL ++LF+LDYHD+F+PYV Q+ +L
Sbjct: 370 NLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSA 426
Query: 481 TLYGSRTVFYLNPDGTLRPLAIELTRPPMDG--KPQWKQAFTPSSDSTKSWLWKLAKAHV 538
Y +RT+ +L DGTL+P+AIEL+ P G Q P+ + +S +W LAKA+V
Sbjct: 427 KTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYV 486
Query: 539 LAHDSGYHQLISHWLRTHCSVEPYAIAAHRQLSAMHPINRLLKPHFRYTMEINSLARQSL 598
+ +DS YHQL+SHWL TH ++EP+ IA HR LS +HPI +LL PH+R M IN+LARQSL
Sbjct: 487 IVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSL 546
Query: 599 INAGGVIESTFLPGKYSMLLSSIIYDKQWRFDHQALPQDLISRGMAAKDPSSPHGLKLTI 658
INA G+IE+TFLP KYS+ +SS +Y K W F QALP DLI RG+A KDPS+PHG++L I
Sbjct: 547 INANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLI 605
Query: 659 EDYPFAQDGLDLWDIIKQWVTDYVSHYYPDPSLVESDEELQAWWTEIRTVGHGDKQDETW 718
EDYP+A DGL++W IK WV +YV YY V++D ELQ WW E GHGD +D+ W
Sbjct: 606 EDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPW 665
Query: 719 WPVLNSPKDLIDTITSIVWVASGLHAAVNFGQYEYAAYFPNRPTIARANMPNEDPSDDEW 778
WP L + +DL++ I+W+AS LHAAVNFGQY Y NRPT +R +P + E+
Sbjct: 666 WPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLP--EKGTPEY 723
Query: 779 QIFFERPEAALLTTFPNQRQATAVISVLDVLSAHSPDEDYLGKYMEPAWGEDKIIKGAFE 838
+ E A L T ++ +SV+++LS H+ DE YLG+ P W D AF+
Sbjct: 724 EEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQ 783
Query: 839 KFQGRLMELKGIINLRNADKNLK-NRHGAGSLPYELLMPLADKSGVTGKGVPYSISI 894
KF +L E++ + RN D +L+ NR G LPY LL P + + G+T +G+P SISI
Sbjct: 784 KFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYP-SSEEGLTFRGIPNSISI 839
>pdb|3BND|A Chain A, Lipoxygenase-1 (Soybean), I553v Mutant
Length = 839
Score = 619 bits (1597), Expect = e-177, Method: Compositional matrix adjust.
Identities = 347/837 (41%), Positives = 488/837 (58%), Gaps = 39/837 (4%)
Query: 78 INPLTAGGQVIDDVEDLFSKSLQLELVSAKDEN---KPTISGNAKIKGV-----VVKDCE 129
+NP G +D++ +S+ L+L+SA + K + + ++G+ + E
Sbjct: 22 VNP---DGSAVDNLNAFLGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGE 78
Query: 130 VQYEAEFQVPVDFGEIGAILVVNEHALEMYLKDIVLDGLPS-GLVTITCESWVQPNTS-- 186
+ F+ G GA + N +E +LK + L+ + + G + C SWV NT
Sbjct: 79 SAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVY-NTKLY 137
Query: 187 KDPRIFFTNKSYLPSKTPNGLQKLRYAELVNLRGNGEGERQKADRIYDYDVYNDLGDPDE 246
K RIFF N +Y+PS+TP L + R EL +LRGNG GER++ DRIYDYDVYNDLG+PD+
Sbjct: 138 KSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDK 197
Query: 247 DEELKRPVLGGKQ-HPYPRRCRTGRPHCKTDEASEERVPSKSLIPISPYVPRDEEFSAIK 305
E+L RPVLGG PYPRR RTGR TD +E++ YVPRDE +K
Sbjct: 198 SEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVF-------YVPRDENLGHLK 250
Query: 306 ETTFVIRGLFGQLRSLIPNLKAEFVDTDGFP----NFTEIDKLFREGVKI-KDAEFWKSL 360
+ G + + P ++ F D P +F ++ L+ G+K+ +D
Sbjct: 251 SKDALEIGTKSLSQIVQPAFESAF-DLKSTPIEFHSFQDVHDLYEGGIKLPRDVISTIIP 309
Query: 361 LPGFVEEIKDIGDFFLRFTSPETFKXXXXXXXXXXXXXXXTLAGLNPCSIRLITEWPLKS 420
LP E + G L+F P + +AG+NPC IR + E+P KS
Sbjct: 310 LPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKS 369
Query: 421 SLDPKIYGPSESAITTEMIESEIKGCTTVKEALNQKKLFILDYHDLFLPYVEQVRELGDR 480
+LDP IYG S IT + ++ + T+ EAL ++LF+LDYHD+F+PYV Q+ +L
Sbjct: 370 NLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSA 426
Query: 481 TLYGSRTVFYLNPDGTLRPLAIELTRPPMDG--KPQWKQAFTPSSDSTKSWLWKLAKAHV 538
Y +RT+ +L DGTL+P+AIEL+ P G Q P+ + +S +W LAKA+V
Sbjct: 427 KTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYV 486
Query: 539 LAHDSGYHQLISHWLRTHCSVEPYAIAAHRQLSAMHPINRLLKPHFRYTMEINSLARQSL 598
+ +DS YHQL+SHWL TH ++EP+ IA HR LS +HPI +LL PH+R M IN+LARQSL
Sbjct: 487 IVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSL 546
Query: 599 INAGGVIESTFLPGKYSMLLSSIIYDKQWRFDHQALPQDLISRGMAAKDPSSPHGLKLTI 658
INA G++E+TFLP KYS+ +SS +Y K W F QALP DLI RG+A KDPS+PHG++L I
Sbjct: 547 INANGIVETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLI 605
Query: 659 EDYPFAQDGLDLWDIIKQWVTDYVSHYYPDPSLVESDEELQAWWTEIRTVGHGDKQDETW 718
EDYP+A DGL++W IK WV +YV YY V++D ELQ WW E GHGD +D+ W
Sbjct: 606 EDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPW 665
Query: 719 WPVLNSPKDLIDTITSIVWVASGLHAAVNFGQYEYAAYFPNRPTIARANMPNEDPSDDEW 778
WP L + +DL++ I+W+AS LHAAVNFGQY Y NRPT +R +P + E+
Sbjct: 666 WPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLP--EKGTPEY 723
Query: 779 QIFFERPEAALLTTFPNQRQATAVISVLDVLSAHSPDEDYLGKYMEPAWGEDKIIKGAFE 838
+ E A L T ++ +SV+++LS H+ DE YLG+ P W D AF+
Sbjct: 724 EEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQ 783
Query: 839 KFQGRLMELKGIINLRNADKNLK-NRHGAGSLPYELLMPLADKSGVTGKGVPYSISI 894
KF +L E++ + RN D +L+ NR G LPY LL P + + G+T +G+P SISI
Sbjct: 784 KFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYP-SSEEGLTFRGIPNSISI 839
>pdb|3BNB|A Chain A, Lipoxygenase-1 (Soybean) I553l Mutant
Length = 839
Score = 619 bits (1596), Expect = e-177, Method: Compositional matrix adjust.
Identities = 347/837 (41%), Positives = 488/837 (58%), Gaps = 39/837 (4%)
Query: 78 INPLTAGGQVIDDVEDLFSKSLQLELVSAKDEN---KPTISGNAKIKGV-----VVKDCE 129
+NP G +D++ +S+ L+L+SA + K + + ++G+ + E
Sbjct: 22 VNP---DGSAVDNLNAFLGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGE 78
Query: 130 VQYEAEFQVPVDFGEIGAILVVNEHALEMYLKDIVLDGLPS-GLVTITCESWVQPNTS-- 186
+ F+ G GA + N +E +LK + L+ + + G + C SWV NT
Sbjct: 79 SAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVY-NTKLY 137
Query: 187 KDPRIFFTNKSYLPSKTPNGLQKLRYAELVNLRGNGEGERQKADRIYDYDVYNDLGDPDE 246
K RIFF N +Y+PS+TP L + R EL +LRGNG GER++ DRIYDYDVYNDLG+PD+
Sbjct: 138 KSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDK 197
Query: 247 DEELKRPVLGGKQ-HPYPRRCRTGRPHCKTDEASEERVPSKSLIPISPYVPRDEEFSAIK 305
E+L RPVLGG PYPRR RTGR TD +E++ YVPRDE +K
Sbjct: 198 SEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVF-------YVPRDENLGHLK 250
Query: 306 ETTFVIRGLFGQLRSLIPNLKAEFVDTDGFP----NFTEIDKLFREGVKI-KDAEFWKSL 360
+ G + + P ++ F D P +F ++ L+ G+K+ +D
Sbjct: 251 SKDALEIGTKSLSQIVQPAFESAF-DLKSTPIEFHSFQDVHDLYEGGIKLPRDVISTIIP 309
Query: 361 LPGFVEEIKDIGDFFLRFTSPETFKXXXXXXXXXXXXXXXTLAGLNPCSIRLITEWPLKS 420
LP E + G L+F P + +AG+NPC IR + E+P KS
Sbjct: 310 LPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKS 369
Query: 421 SLDPKIYGPSESAITTEMIESEIKGCTTVKEALNQKKLFILDYHDLFLPYVEQVRELGDR 480
+LDP IYG S IT + ++ + T+ EAL ++LF+LDYHD+F+PYV Q+ +L
Sbjct: 370 NLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSA 426
Query: 481 TLYGSRTVFYLNPDGTLRPLAIELTRPPMDG--KPQWKQAFTPSSDSTKSWLWKLAKAHV 538
Y +RT+ +L DGTL+P+AIEL+ P G Q P+ + +S +W LAKA+V
Sbjct: 427 KTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYV 486
Query: 539 LAHDSGYHQLISHWLRTHCSVEPYAIAAHRQLSAMHPINRLLKPHFRYTMEINSLARQSL 598
+ +DS YHQL+SHWL TH ++EP+ IA HR LS +HPI +LL PH+R M IN+LARQSL
Sbjct: 487 IVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSL 546
Query: 599 INAGGVIESTFLPGKYSMLLSSIIYDKQWRFDHQALPQDLISRGMAAKDPSSPHGLKLTI 658
INA G++E+TFLP KYS+ +SS +Y K W F QALP DLI RG+A KDPS+PHG++L I
Sbjct: 547 INANGILETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLI 605
Query: 659 EDYPFAQDGLDLWDIIKQWVTDYVSHYYPDPSLVESDEELQAWWTEIRTVGHGDKQDETW 718
EDYP+A DGL++W IK WV +YV YY V++D ELQ WW E GHGD +D+ W
Sbjct: 606 EDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPW 665
Query: 719 WPVLNSPKDLIDTITSIVWVASGLHAAVNFGQYEYAAYFPNRPTIARANMPNEDPSDDEW 778
WP L + +DL++ I+W+AS LHAAVNFGQY Y NRPT +R +P + E+
Sbjct: 666 WPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLP--EKGTPEY 723
Query: 779 QIFFERPEAALLTTFPNQRQATAVISVLDVLSAHSPDEDYLGKYMEPAWGEDKIIKGAFE 838
+ E A L T ++ +SV+++LS H+ DE YLG+ P W D AF+
Sbjct: 724 EEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQ 783
Query: 839 KFQGRLMELKGIINLRNADKNLK-NRHGAGSLPYELLMPLADKSGVTGKGVPYSISI 894
KF +L E++ + RN D +L+ NR G LPY LL P + + G+T +G+P SISI
Sbjct: 784 KFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYP-SSEEGLTFRGIPNSISI 839
>pdb|1ROV|A Chain A, Lipoxygenase-3 Treated With Cumene Hydroperoxide
Length = 857
Score = 618 bits (1594), Expect = e-177, Method: Compositional matrix adjust.
Identities = 344/827 (41%), Positives = 489/827 (59%), Gaps = 30/827 (3%)
Query: 85 GQVIDDVEDLFSKSLQLELVSA--KDENKPTISGNAK-IKGVV-----VKDCEVQYEAEF 136
G +D + +S+ L+L+SA D N G A ++G++ + + ++ F
Sbjct: 44 GSTLDTLTAFLGRSVSLQLISATKADANGKGKLGKATFLEGIITSLPTLGAGQSAFKINF 103
Query: 137 QVPVDFGEIGAILVVNEHALEMYLKDIVLDGLPS-GLVTITCESWV-QPNTSKDPRIFFT 194
+ G GA + N E +L + L+ +P+ G + C SW+ K RIFF
Sbjct: 104 EWDDGSGIPGAFYIKNFMQTEFFLVSLTLEDIPNHGSIHFVCNSWIYNAKLFKSDRIFFA 163
Query: 195 NKSYLPSKTPNGLQKLRYAELVNLRGNGEGERQKADRIYDYDVYNDLGDPDEDEELKRPV 254
N++YLPS+TP L K R EL NLRG+G GER++ +RIYDYDVYNDLGDPD+ E RPV
Sbjct: 164 NQTYLPSETPAPLVKYREEELHNLRGDGTGERKEWERIYDYDVYNDLGDPDKGENHARPV 223
Query: 255 LGGKQ-HPYPRRCRTGRPHCKTDEASEERVPSKSLIPISPYVPRDEEFSAIKETTFVIRG 313
LGG PYPRR RTGR + D SE R Y+PRDE F +K + F+ G
Sbjct: 224 LGGNDTFPYPRRGRTGRKPTRKDPNSESRSNDV-------YLPRDEAFGHLKSSDFLTYG 276
Query: 314 LFGQLRSLIPNLKAEF---VDTDGFPNFTEIDKLFREGVKIKDAEFWK-SLLPGFVEEIK 369
L ++++P L++ F F +F E+ L+ G+K+ K S LP E +
Sbjct: 277 LKSVSQNVLPLLQSAFDLNFTPREFDSFDEVHGLYSGGIKLPTDIISKISPLPVLKEIFR 336
Query: 370 DIGDFFLRFTSPETFKXXXXXXXXXXXXXXXTLAGLNPCSIRLITEWPLKSSLDPKIYGP 429
G+ L+F P+ + LAG+NP IR + ++P +S LD ++YG
Sbjct: 337 TDGEQALKFPPPKVIQVSKSAWMTDEEFAREMLAGVNPNLIRCLKDFPPRSKLDSQVYGD 396
Query: 430 SESAITTEMIESEIKGCTTVKEALNQKKLFILDYHDLFLPYVEQVRELGDRTLYGSRTVF 489
S IT E +E ++G T V EA+ K+LF+LD+HD +PY+ ++ + Y +RT+
Sbjct: 397 HTSQITKEHLEPNLEGLT-VDEAIQNKRLFLLDHHDPIMPYLRRINATSTKA-YATRTIL 454
Query: 490 YLNPDGTLRPLAIELT--RPPMDGKPQWKQAFTPSSDSTKSWLWKLAKAHVLAHDSGYHQ 547
+L DGTLRPLAIEL+ P D + Q F P+ + +S +W LAKA+V+ +DS YHQ
Sbjct: 455 FLKNDGTLRPLAIELSLPHPQGDQSGAFSQVFLPADEGVESSIWLLAKAYVVVNDSCYHQ 514
Query: 548 LISHWLRTHCSVEPYAIAAHRQLSAMHPINRLLKPHFRYTMEINSLARQSLINAGGVIES 607
L+SH L TH VEP+ IA +R LS +HPI +LL PH+R TM IN LAR S +N GGVIE
Sbjct: 515 LVSHXLNTHAVVEPFIIATNRHLSVVHPIYKLLHPHYRDTMNINGLARLSXVNDGGVIEQ 574
Query: 608 TFLPGKYSMLLSSIIYDKQWRFDHQALPQDLISRGMAAKDPSSPHGLKLTIEDYPFAQDG 667
TFL G+YS+ +S+++Y K W F QALP DLI RGMA +DPS PHG++L IEDYP+ DG
Sbjct: 575 TFLWGRYSVEMSAVVY-KDWVFTDQALPADLIKRGMAIEDPSCPHGIRLVIEDYPYTVDG 633
Query: 668 LDLWDIIKQWVTDYVSHYYPDPSLVESDEELQAWWTEIRTVGHGDKQDETWWPVLNSPKD 727
L++WD IK WV +YV YY + D ELQA W E+ VGHGDK++E WWP + + ++
Sbjct: 634 LEIWDAIKTWVHEYVFLYYKSDDTLREDPELQACWKELVEVGHGDKKNEPWWPKMQTREE 693
Query: 728 LIDTITSIVWVASGLHAAVNFGQYEYAAYFPNRPTIARANMPNEDPSDDEWQIFFERPEA 787
L++ I+W AS LHAAVNFGQY Y NRPT++R MP + + E++ + P+
Sbjct: 694 LVEACAIIIWTASALHAAVNFGQYPYGGLILNRPTLSRRFMPEKGSA--EYEELRKNPQK 751
Query: 788 ALLTTFPNQRQATAVISVLDVLSAHSPDEDYLGKYMEPAWGEDKIIKGAFEKFQGRLMEL 847
A L T + Q +SV+++LS H+ DE YLG+ P W D AF++F +L ++
Sbjct: 752 AYLKTITPKFQTLIDLSVIEILSRHASDEVYLGERDNPNWTSDTRALEAFKRFGNKLAQI 811
Query: 848 KGIINLRNADKNLKNRHGAGSLPYELLMPLADKSGVTGKGVPYSISI 894
+ ++ RN D+ L+NR G +PY LL+P + K G+T +G+P SISI
Sbjct: 812 ENKLSERNNDEKLRNRCGPVQMPYTLLLP-SSKEGLTFRGIPNSISI 857
>pdb|1FGR|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant
Length = 839
Score = 618 bits (1594), Expect = e-177, Method: Compositional matrix adjust.
Identities = 347/837 (41%), Positives = 487/837 (58%), Gaps = 39/837 (4%)
Query: 78 INPLTAGGQVIDDVEDLFSKSLQLELVSAKDEN---KPTISGNAKIKGV-----VVKDCE 129
+NP G +D++ +S+ L+L+SA + K + + ++G+ + E
Sbjct: 22 VNP---DGSAVDNLNAFLGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGE 78
Query: 130 VQYEAEFQVPVDFGEIGAILVVNEHALEMYLKDIVLDGLPS-GLVTITCESWVQPNTS-- 186
+ F+ G GA + N +E +LK + L+ + + G + C SWV NT
Sbjct: 79 SAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVY-NTKLY 137
Query: 187 KDPRIFFTNKSYLPSKTPNGLQKLRYAELVNLRGNGEGERQKADRIYDYDVYNDLGDPDE 246
K RIFF N +Y+PS+TP L R EL +LRGNG GER++ DRIYDYDVYNDLG+PD+
Sbjct: 138 KSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDK 197
Query: 247 DEELKRPVLGGKQ-HPYPRRCRTGRPHCKTDEASEERVPSKSLIPISPYVPRDEEFSAIK 305
E+L RPVLGG PYPRR RTGR TD +E++ YVPRDE +K
Sbjct: 198 SEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVF-------YVPRDENLGHLK 250
Query: 306 ETTFVIRGLFGQLRSLIPNLKAEFVDTDGFP----NFTEIDKLFREGVKI-KDAEFWKSL 360
+ G + + P ++ F D P +F ++ L+ G+K+ +D
Sbjct: 251 SKDALEIGTKSLSQIVQPAFESAF-DLKSTPIEFHSFQDVHDLYEGGIKLPRDVISTIIP 309
Query: 361 LPGFVEEIKDIGDFFLRFTSPETFKXXXXXXXXXXXXXXXTLAGLNPCSIRLITEWPLKS 420
LP E + G L+F P + +AG+NPC IR + E+P KS
Sbjct: 310 LPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKS 369
Query: 421 SLDPKIYGPSESAITTEMIESEIKGCTTVKEALNQKKLFILDYHDLFLPYVEQVRELGDR 480
+LDP IYG S IT + ++ + T+ EAL ++LF+LDYHD+F+PYV Q+ +L
Sbjct: 370 NLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSA 426
Query: 481 TLYGSRTVFYLNPDGTLRPLAIELTRPPMDG--KPQWKQAFTPSSDSTKSWLWKLAKAHV 538
Y +RT+ +L DGTL+P+AIEL+ P G Q P+ + +S +W LAKA+V
Sbjct: 427 KTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYV 486
Query: 539 LAHDSGYHQLISHWLRTHCSVEPYAIAAHRQLSAMHPINRLLKPHFRYTMEINSLARQSL 598
+ +DS YHQL+SHWL TH ++EP+ IA HR LS +HPI +LL PH+R M IN+LARQSL
Sbjct: 487 IVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSL 546
Query: 599 INAGGVIESTFLPGKYSMLLSSIIYDKQWRFDHQALPQDLISRGMAAKDPSSPHGLKLTI 658
INA G+IE+TFLP KYS+ +SS +Y K W F QALP DLI RG+A KDPS+PHG++L I
Sbjct: 547 INANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLI 605
Query: 659 EDYPFAQDGLDLWDIIKQWVTDYVSHYYPDPSLVESDEELQAWWTEIRTVGHGDKQDETW 718
EDYP+A DGL++W IK WV +YV YY V++D ELQ WW E GHGD +D+ W
Sbjct: 606 EDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPW 665
Query: 719 WPVLNSPKDLIDTITSIVWVASGLHAAVNFGQYEYAAYFPNRPTIARANMPNEDPSDDEW 778
WP L + +DL++ I+W+AS LHAAVNFG+Y Y NRPT +R +P + E+
Sbjct: 666 WPKLQTLEDLVEVCLIIIWIASALHAAVNFGEYPYGGLIMNRPTASRRLLP--EKGTPEY 723
Query: 779 QIFFERPEAALLTTFPNQRQATAVISVLDVLSAHSPDEDYLGKYMEPAWGEDKIIKGAFE 838
+ E A L T ++ +SV+++LS H+ DE YLG+ P W D AF+
Sbjct: 724 EEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQ 783
Query: 839 KFQGRLMELKGIINLRNADKNLK-NRHGAGSLPYELLMPLADKSGVTGKGVPYSISI 894
KF +L E++ + RN D +L+ NR G LPY LL P + + G+T +G+P SISI
Sbjct: 784 KFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYP-SSEEGLTFRGIPNSISI 839
>pdb|1FGQ|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant
Length = 839
Score = 618 bits (1594), Expect = e-177, Method: Compositional matrix adjust.
Identities = 347/837 (41%), Positives = 487/837 (58%), Gaps = 39/837 (4%)
Query: 78 INPLTAGGQVIDDVEDLFSKSLQLELVSAKDEN---KPTISGNAKIKGV-----VVKDCE 129
+NP G +D++ +S+ L+L+SA + K + + ++G+ + E
Sbjct: 22 VNP---DGSAVDNLNAFLGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGE 78
Query: 130 VQYEAEFQVPVDFGEIGAILVVNEHALEMYLKDIVLDGLPS-GLVTITCESWVQPNTS-- 186
+ F+ G GA + N +E +LK + L+ + + G + C SWV NT
Sbjct: 79 SAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVY-NTKLY 137
Query: 187 KDPRIFFTNKSYLPSKTPNGLQKLRYAELVNLRGNGEGERQKADRIYDYDVYNDLGDPDE 246
K RIFF N +Y+PS+TP L R EL +LRGNG GER++ DRIYDYDVYNDLG+PD+
Sbjct: 138 KSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDK 197
Query: 247 DEELKRPVLGGKQ-HPYPRRCRTGRPHCKTDEASEERVPSKSLIPISPYVPRDEEFSAIK 305
E+L RPVLGG PYPRR RTGR TD +E++ YVPRDE +K
Sbjct: 198 SEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVF-------YVPRDENLGHLK 250
Query: 306 ETTFVIRGLFGQLRSLIPNLKAEFVDTDGFP----NFTEIDKLFREGVKI-KDAEFWKSL 360
+ G + + P ++ F D P +F ++ L+ G+K+ +D
Sbjct: 251 SKDALEIGTKSLSQIVQPAFESAF-DLKSTPIEFHSFQDVHDLYEGGIKLPRDVISTIIP 309
Query: 361 LPGFVEEIKDIGDFFLRFTSPETFKXXXXXXXXXXXXXXXTLAGLNPCSIRLITEWPLKS 420
LP E + G L+F P + +AG+NPC IR + E+P KS
Sbjct: 310 LPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKS 369
Query: 421 SLDPKIYGPSESAITTEMIESEIKGCTTVKEALNQKKLFILDYHDLFLPYVEQVRELGDR 480
+LDP IYG S IT + ++ + T+ EAL ++LF+LDYHD+F+PYV Q+ +L
Sbjct: 370 NLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSA 426
Query: 481 TLYGSRTVFYLNPDGTLRPLAIELTRPPMDG--KPQWKQAFTPSSDSTKSWLWKLAKAHV 538
Y +RT+ +L DGTL+P+AIEL+ P G Q P+ + +S +W LAKA+V
Sbjct: 427 KTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYV 486
Query: 539 LAHDSGYHQLISHWLRTHCSVEPYAIAAHRQLSAMHPINRLLKPHFRYTMEINSLARQSL 598
+ +DS YH+L+SHWL TH ++EP+ IA HR LS +HPI +LL PH+R M IN+LARQSL
Sbjct: 487 IVNDSCYHELMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSL 546
Query: 599 INAGGVIESTFLPGKYSMLLSSIIYDKQWRFDHQALPQDLISRGMAAKDPSSPHGLKLTI 658
INA G+IE+TFLP KYS+ +SS +Y K W F QALP DLI RG+A KDPS+PHG++L I
Sbjct: 547 INANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLI 605
Query: 659 EDYPFAQDGLDLWDIIKQWVTDYVSHYYPDPSLVESDEELQAWWTEIRTVGHGDKQDETW 718
EDYP+A DGL++W IK WV +YV YY V++D ELQ WW E GHGD +D+ W
Sbjct: 606 EDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPW 665
Query: 719 WPVLNSPKDLIDTITSIVWVASGLHAAVNFGQYEYAAYFPNRPTIARANMPNEDPSDDEW 778
WP L + +DL++ I+W+AS LHAAVNFGQY Y NRPT +R +P + E+
Sbjct: 666 WPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLP--EKGTPEY 723
Query: 779 QIFFERPEAALLTTFPNQRQATAVISVLDVLSAHSPDEDYLGKYMEPAWGEDKIIKGAFE 838
+ E A L T ++ +SV+++LS H+ DE YLG+ P W D AF+
Sbjct: 724 EEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQ 783
Query: 839 KFQGRLMELKGIINLRNADKNLK-NRHGAGSLPYELLMPLADKSGVTGKGVPYSISI 894
KF +L E++ + RN D +L+ NR G LPY LL P + + G+T +G+P SISI
Sbjct: 784 KFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYP-SSEEGLTFRGIPNSISI 839
>pdb|3BNE|A Chain A, Lipoxygenase-1 (Soybean) I553a Mutant
Length = 839
Score = 618 bits (1593), Expect = e-177, Method: Compositional matrix adjust.
Identities = 347/837 (41%), Positives = 487/837 (58%), Gaps = 39/837 (4%)
Query: 78 INPLTAGGQVIDDVEDLFSKSLQLELVSAKDEN---KPTISGNAKIKGV-----VVKDCE 129
+NP G +D++ +S+ L+L+SA + K + + ++G+ + E
Sbjct: 22 VNP---DGSAVDNLNAFLGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGE 78
Query: 130 VQYEAEFQVPVDFGEIGAILVVNEHALEMYLKDIVLDGLPS-GLVTITCESWVQPNTS-- 186
+ F+ G GA + N +E +LK + L+ + + G + C SWV NT
Sbjct: 79 SAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVY-NTKLY 137
Query: 187 KDPRIFFTNKSYLPSKTPNGLQKLRYAELVNLRGNGEGERQKADRIYDYDVYNDLGDPDE 246
K RIFF N +Y+PS+TP L + R EL +LRGNG GER++ DRIYDYDVYNDLG+PD+
Sbjct: 138 KSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDK 197
Query: 247 DEELKRPVLGGKQ-HPYPRRCRTGRPHCKTDEASEERVPSKSLIPISPYVPRDEEFSAIK 305
E+L RPVLGG PYPRR RTGR TD +E++ YVPRDE +K
Sbjct: 198 SEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVF-------YVPRDENLGHLK 250
Query: 306 ETTFVIRGLFGQLRSLIPNLKAEFVDTDGFP----NFTEIDKLFREGVKI-KDAEFWKSL 360
+ G + + P ++ F D P +F ++ L+ G+K+ +D
Sbjct: 251 SKDALEIGTKSLSQIVQPAFESAF-DLKSTPIEFHSFQDVHDLYEGGIKLPRDVISTIIP 309
Query: 361 LPGFVEEIKDIGDFFLRFTSPETFKXXXXXXXXXXXXXXXTLAGLNPCSIRLITEWPLKS 420
LP E + G L+F P + +AG+NPC IR + E+P KS
Sbjct: 310 LPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKS 369
Query: 421 SLDPKIYGPSESAITTEMIESEIKGCTTVKEALNQKKLFILDYHDLFLPYVEQVRELGDR 480
+LDP IYG S IT + ++ + T+ EAL ++LF+LDYHD+F+PYV Q+ +L
Sbjct: 370 NLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSA 426
Query: 481 TLYGSRTVFYLNPDGTLRPLAIELTRPPMDG--KPQWKQAFTPSSDSTKSWLWKLAKAHV 538
Y +RT+ +L DGTL+P+AIEL+ P G Q P+ + +S +W LAKA+V
Sbjct: 427 KTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYV 486
Query: 539 LAHDSGYHQLISHWLRTHCSVEPYAIAAHRQLSAMHPINRLLKPHFRYTMEINSLARQSL 598
+ +DS YHQL+SHWL TH ++EP+ IA HR LS +HPI +LL PH+R M IN+LARQSL
Sbjct: 487 IVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSL 546
Query: 599 INAGGVIESTFLPGKYSMLLSSIIYDKQWRFDHQALPQDLISRGMAAKDPSSPHGLKLTI 658
INA G+ E+TFLP KYS+ +SS +Y K W F QALP DLI RG+A KDPS+PHG++L I
Sbjct: 547 INANGIAETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLI 605
Query: 659 EDYPFAQDGLDLWDIIKQWVTDYVSHYYPDPSLVESDEELQAWWTEIRTVGHGDKQDETW 718
EDYP+A DGL++W IK WV +YV YY V++D ELQ WW E GHGD +D+ W
Sbjct: 606 EDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPW 665
Query: 719 WPVLNSPKDLIDTITSIVWVASGLHAAVNFGQYEYAAYFPNRPTIARANMPNEDPSDDEW 778
WP L + +DL++ I+W+AS LHAAVNFGQY Y NRPT +R +P + E+
Sbjct: 666 WPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLP--EKGTPEY 723
Query: 779 QIFFERPEAALLTTFPNQRQATAVISVLDVLSAHSPDEDYLGKYMEPAWGEDKIIKGAFE 838
+ E A L T ++ +SV+++LS H+ DE YLG+ P W D AF+
Sbjct: 724 EEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQ 783
Query: 839 KFQGRLMELKGIINLRNADKNLK-NRHGAGSLPYELLMPLADKSGVTGKGVPYSISI 894
KF +L E++ + RN D +L+ NR G LPY LL P + + G+T +G+P SISI
Sbjct: 784 KFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYP-SSEEGLTFRGIPNSISI 839
>pdb|1FGT|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant
Length = 839
Score = 618 bits (1593), Expect = e-177, Method: Compositional matrix adjust.
Identities = 347/837 (41%), Positives = 486/837 (58%), Gaps = 39/837 (4%)
Query: 78 INPLTAGGQVIDDVEDLFSKSLQLELVSAKDEN---KPTISGNAKIKGV-----VVKDCE 129
+NP G +D++ +S+ L+L+SA + K + + ++G+ + E
Sbjct: 22 VNP---DGSAVDNLNAFLGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGE 78
Query: 130 VQYEAEFQVPVDFGEIGAILVVNEHALEMYLKDIVLDGLPS-GLVTITCESWVQPNTS-- 186
+ F+ G GA + N +E +LK + L+ + + G + C SWV NT
Sbjct: 79 SAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVY-NTKLY 137
Query: 187 KDPRIFFTNKSYLPSKTPNGLQKLRYAELVNLRGNGEGERQKADRIYDYDVYNDLGDPDE 246
K RIFF N +Y+PS+TP L R EL +LRGNG GER++ DRIYDYDVYNDLG+PD+
Sbjct: 138 KSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDK 197
Query: 247 DEELKRPVLGGKQ-HPYPRRCRTGRPHCKTDEASEERVPSKSLIPISPYVPRDEEFSAIK 305
E+L RPVLGG PYPRR RTGR TD +E++ YVPRDE +K
Sbjct: 198 SEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVF-------YVPRDENLGHLK 250
Query: 306 ETTFVIRGLFGQLRSLIPNLKAEFVDTDGFP----NFTEIDKLFREGVKI-KDAEFWKSL 360
+ G + + P ++ F D P +F ++ L+ G+K+ +D
Sbjct: 251 SKDALEIGTKSLSQIVQPAFESAF-DLKSTPIEFHSFQDVHDLYEGGIKLPRDVISTIIP 309
Query: 361 LPGFVEEIKDIGDFFLRFTSPETFKXXXXXXXXXXXXXXXTLAGLNPCSIRLITEWPLKS 420
LP E + G L+F P + +AG+NPC IR + E+P KS
Sbjct: 310 LPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKS 369
Query: 421 SLDPKIYGPSESAITTEMIESEIKGCTTVKEALNQKKLFILDYHDLFLPYVEQVRELGDR 480
+LDP IYG S IT + ++ + T+ EAL ++LF+LDYHD+F+PYV Q+ +L
Sbjct: 370 NLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSA 426
Query: 481 TLYGSRTVFYLNPDGTLRPLAIELTRPPMDG--KPQWKQAFTPSSDSTKSWLWKLAKAHV 538
Y +RT+ +L DGTL+P+AIEL+ P G Q P+ + +S +W LAKA+V
Sbjct: 427 KTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYV 486
Query: 539 LAHDSGYHQLISHWLRTHCSVEPYAIAAHRQLSAMHPINRLLKPHFRYTMEINSLARQSL 598
+ +DS YHQL+SHWL TH ++EP+ IA HR LS +HPI +LL PH+R M IN+LARQSL
Sbjct: 487 IVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSL 546
Query: 599 INAGGVIESTFLPGKYSMLLSSIIYDKQWRFDHQALPQDLISRGMAAKDPSSPHGLKLTI 658
INA G+IE+TFLP KYS+ +SS +Y K W F QALP DLI RG+A KDPS+PHG++L I
Sbjct: 547 INANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLI 605
Query: 659 EDYPFAQDGLDLWDIIKQWVTDYVSHYYPDPSLVESDEELQAWWTEIRTVGHGDKQDETW 718
EDYP+A DGL++W IK WV +YV YY V++D ELQ WW E GHGD +D+ W
Sbjct: 606 EDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPW 665
Query: 719 WPVLNSPKDLIDTITSIVWVASGLHAAVNFGQYEYAAYFPNRPTIARANMPNEDPSDDEW 778
WP L + +DL++ I+W+AS LHAAVNFG Y Y NRPT +R +P + E+
Sbjct: 666 WPKLQTLEDLVEVCLIIIWIASALHAAVNFGNYPYGGLIMNRPTASRRLLP--EKGTPEY 723
Query: 779 QIFFERPEAALLTTFPNQRQATAVISVLDVLSAHSPDEDYLGKYMEPAWGEDKIIKGAFE 838
+ E A L T ++ +SV+++LS H+ DE YLG+ P W D AF+
Sbjct: 724 EEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQ 783
Query: 839 KFQGRLMELKGIINLRNADKNLK-NRHGAGSLPYELLMPLADKSGVTGKGVPYSISI 894
KF +L E++ + RN D +L+ NR G LPY LL P + + G+T +G+P SISI
Sbjct: 784 KFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYP-SSEEGLTFRGIPNSISI 839
>pdb|1FGM|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694h Mutant
Length = 839
Score = 617 bits (1592), Expect = e-177, Method: Compositional matrix adjust.
Identities = 347/837 (41%), Positives = 487/837 (58%), Gaps = 39/837 (4%)
Query: 78 INPLTAGGQVIDDVEDLFSKSLQLELVSAKDEN---KPTISGNAKIKGV-----VVKDCE 129
+NP G +D++ +S+ L+L+SA + K + + ++G+ + E
Sbjct: 22 VNP---DGSAVDNLNAFLGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGE 78
Query: 130 VQYEAEFQVPVDFGEIGAILVVNEHALEMYLKDIVLDGLPS-GLVTITCESWVQPNTS-- 186
+ F+ G GA + N +E +LK + L+ + + G + C SWV NT
Sbjct: 79 SAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVY-NTKLY 137
Query: 187 KDPRIFFTNKSYLPSKTPNGLQKLRYAELVNLRGNGEGERQKADRIYDYDVYNDLGDPDE 246
K RIFF N +Y+PS+TP L R EL +LRGNG GER++ DRIYDYDVYNDLG+PD+
Sbjct: 138 KSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDK 197
Query: 247 DEELKRPVLGGKQ-HPYPRRCRTGRPHCKTDEASEERVPSKSLIPISPYVPRDEEFSAIK 305
E+L RPVLGG PYPRR RTGR TD +E++ YVPRDE +K
Sbjct: 198 SEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVF-------YVPRDENLGHLK 250
Query: 306 ETTFVIRGLFGQLRSLIPNLKAEFVDTDGFP----NFTEIDKLFREGVKI-KDAEFWKSL 360
+ G + + P ++ F D P +F ++ L+ G+K+ +D
Sbjct: 251 SKDALEIGTKSLSQIVQPAFESAF-DLKSTPIEFHSFQDVHDLYEGGIKLPRDVISTIIP 309
Query: 361 LPGFVEEIKDIGDFFLRFTSPETFKXXXXXXXXXXXXXXXTLAGLNPCSIRLITEWPLKS 420
LP E + G L+F P + +AG+NPC IR + E+P KS
Sbjct: 310 LPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKS 369
Query: 421 SLDPKIYGPSESAITTEMIESEIKGCTTVKEALNQKKLFILDYHDLFLPYVEQVRELGDR 480
+LDP IYG S IT + ++ + T+ EAL ++LF+LDYHD+F+PYV Q+ +L
Sbjct: 370 NLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSA 426
Query: 481 TLYGSRTVFYLNPDGTLRPLAIELTRPPMDG--KPQWKQAFTPSSDSTKSWLWKLAKAHV 538
Y +RT+ +L DGTL+P+AIEL+ P G Q P+ + +S +W LAKA+V
Sbjct: 427 KTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYV 486
Query: 539 LAHDSGYHQLISHWLRTHCSVEPYAIAAHRQLSAMHPINRLLKPHFRYTMEINSLARQSL 598
+ +DS YHQL+SHWL TH ++EP+ IA HR LS +HPI +LL PH+R M IN+LARQSL
Sbjct: 487 IVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSL 546
Query: 599 INAGGVIESTFLPGKYSMLLSSIIYDKQWRFDHQALPQDLISRGMAAKDPSSPHGLKLTI 658
INA G+IE+TFLP KYS+ +SS +Y K W F QALP DLI RG+A KDPS+PHG++L I
Sbjct: 547 INANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLI 605
Query: 659 EDYPFAQDGLDLWDIIKQWVTDYVSHYYPDPSLVESDEELQAWWTEIRTVGHGDKQDETW 718
EDYP+A DGL++W IK WV +YV YY V++D ELQ WW E GHGD +D+ W
Sbjct: 606 EDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPW 665
Query: 719 WPVLNSPKDLIDTITSIVWVASGLHAAVNFGQYEYAAYFPNRPTIARANMPNEDPSDDEW 778
WP L + +DL++ I+W+AS LHAAV+FGQY Y NRPT +R +P + E+
Sbjct: 666 WPKLQTLEDLVEVCLIIIWIASALHAAVHFGQYPYGGLIMNRPTASRRLLP--EKGTPEY 723
Query: 779 QIFFERPEAALLTTFPNQRQATAVISVLDVLSAHSPDEDYLGKYMEPAWGEDKIIKGAFE 838
+ E A L T ++ +SV+++LS H+ DE YLG+ P W D AF+
Sbjct: 724 EEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQ 783
Query: 839 KFQGRLMELKGIINLRNADKNLK-NRHGAGSLPYELLMPLADKSGVTGKGVPYSISI 894
KF +L E++ + RN D +L+ NR G LPY LL P + + G+T +G+P SISI
Sbjct: 784 KFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYP-SSEEGLTFRGIPNSISI 839
>pdb|1FGO|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant
Length = 839
Score = 617 bits (1592), Expect = e-177, Method: Compositional matrix adjust.
Identities = 347/837 (41%), Positives = 486/837 (58%), Gaps = 39/837 (4%)
Query: 78 INPLTAGGQVIDDVEDLFSKSLQLELVSAKDEN---KPTISGNAKIKGV-----VVKDCE 129
+NP G +D++ +S+ L+L+SA + K + + ++G+ + E
Sbjct: 22 VNP---DGSAVDNLNAFLGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGE 78
Query: 130 VQYEAEFQVPVDFGEIGAILVVNEHALEMYLKDIVLDGLPS-GLVTITCESWVQPNTS-- 186
+ F+ G GA + N +E +LK + L+ + + G + C SWV NT
Sbjct: 79 SAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVY-NTKLY 137
Query: 187 KDPRIFFTNKSYLPSKTPNGLQKLRYAELVNLRGNGEGERQKADRIYDYDVYNDLGDPDE 246
K RIFF N +Y+PS+TP L R EL +LRGNG GER++ DRIYDYDVYNDLG+PD+
Sbjct: 138 KSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDK 197
Query: 247 DEELKRPVLGGKQ-HPYPRRCRTGRPHCKTDEASEERVPSKSLIPISPYVPRDEEFSAIK 305
E+L RPVLGG PYPRR RTGR TD +E++ YVPRDE +K
Sbjct: 198 SEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVF-------YVPRDENLGHLK 250
Query: 306 ETTFVIRGLFGQLRSLIPNLKAEFVDTDGFP----NFTEIDKLFREGVKI-KDAEFWKSL 360
+ G + + P ++ F D P +F ++ L+ G+K+ +D
Sbjct: 251 SKDALEIGTKSLSQIVQPAFESAF-DLKSTPIEFHSFQDVHDLYEGGIKLPRDVISTIIP 309
Query: 361 LPGFVEEIKDIGDFFLRFTSPETFKXXXXXXXXXXXXXXXTLAGLNPCSIRLITEWPLKS 420
LP E + G L+F P + +AG+NPC IR + E+P KS
Sbjct: 310 LPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKS 369
Query: 421 SLDPKIYGPSESAITTEMIESEIKGCTTVKEALNQKKLFILDYHDLFLPYVEQVRELGDR 480
+LDP IYG S IT + ++ + T+ EAL ++LF+LDYHD+F+PYV Q+ +L
Sbjct: 370 NLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSA 426
Query: 481 TLYGSRTVFYLNPDGTLRPLAIELTRPPMDG--KPQWKQAFTPSSDSTKSWLWKLAKAHV 538
Y +RT+ +L DGTL+P+AIEL+ P G Q P+ + +S +W LAKA+V
Sbjct: 427 KTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYV 486
Query: 539 LAHDSGYHQLISHWLRTHCSVEPYAIAAHRQLSAMHPINRLLKPHFRYTMEINSLARQSL 598
+ +DS YH L+SHWL TH ++EP+ IA HR LS +HPI +LL PH+R M IN+LARQSL
Sbjct: 487 IVNDSCYHALMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSL 546
Query: 599 INAGGVIESTFLPGKYSMLLSSIIYDKQWRFDHQALPQDLISRGMAAKDPSSPHGLKLTI 658
INA G+IE+TFLP KYS+ +SS +Y K W F QALP DLI RG+A KDPS+PHG++L I
Sbjct: 547 INANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLI 605
Query: 659 EDYPFAQDGLDLWDIIKQWVTDYVSHYYPDPSLVESDEELQAWWTEIRTVGHGDKQDETW 718
EDYP+A DGL++W IK WV +YV YY V++D ELQ WW E GHGD +D+ W
Sbjct: 606 EDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPW 665
Query: 719 WPVLNSPKDLIDTITSIVWVASGLHAAVNFGQYEYAAYFPNRPTIARANMPNEDPSDDEW 778
WP L + +DL++ I+W+AS LHAAVNFGQY Y NRPT +R +P + E+
Sbjct: 666 WPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLP--EKGTPEY 723
Query: 779 QIFFERPEAALLTTFPNQRQATAVISVLDVLSAHSPDEDYLGKYMEPAWGEDKIIKGAFE 838
+ E A L T ++ +SV+++LS H+ DE YLG+ P W D AF+
Sbjct: 724 EEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQ 783
Query: 839 KFQGRLMELKGIINLRNADKNLK-NRHGAGSLPYELLMPLADKSGVTGKGVPYSISI 894
KF +L E++ + RN D +L+ NR G LPY LL P + + G+T +G+P SISI
Sbjct: 784 KFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYP-SSEEGLTFRGIPNSISI 839
>pdb|1Y4K|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694g Mutant
Length = 839
Score = 617 bits (1591), Expect = e-176, Method: Compositional matrix adjust.
Identities = 347/837 (41%), Positives = 486/837 (58%), Gaps = 39/837 (4%)
Query: 78 INPLTAGGQVIDDVEDLFSKSLQLELVSAKDEN---KPTISGNAKIKGV-----VVKDCE 129
+NP G +D++ +S+ L+L+SA + K + + ++G+ + E
Sbjct: 22 VNP---DGSAVDNLNAFLGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGE 78
Query: 130 VQYEAEFQVPVDFGEIGAILVVNEHALEMYLKDIVLDGLPS-GLVTITCESWVQPNTS-- 186
+ F+ G GA + N +E +LK + L+ + + G + C SWV NT
Sbjct: 79 SAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVY-NTKLY 137
Query: 187 KDPRIFFTNKSYLPSKTPNGLQKLRYAELVNLRGNGEGERQKADRIYDYDVYNDLGDPDE 246
K RIFF N +Y+PS+TP L R EL +LRGNG GER++ DRIYDYDVYNDLG+PD+
Sbjct: 138 KSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDK 197
Query: 247 DEELKRPVLGGKQ-HPYPRRCRTGRPHCKTDEASEERVPSKSLIPISPYVPRDEEFSAIK 305
E+L RPVLGG PYPRR RTGR TD +E++ YVPRDE +K
Sbjct: 198 SEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVF-------YVPRDENLGHLK 250
Query: 306 ETTFVIRGLFGQLRSLIPNLKAEFVDTDGFP----NFTEIDKLFREGVKI-KDAEFWKSL 360
+ G + + P ++ F D P +F ++ L+ G+K+ +D
Sbjct: 251 SKDALEIGTKSLSQIVQPAFESAF-DLKSTPIEFHSFQDVHDLYEGGIKLPRDVISTIIP 309
Query: 361 LPGFVEEIKDIGDFFLRFTSPETFKXXXXXXXXXXXXXXXTLAGLNPCSIRLITEWPLKS 420
LP E + G L+F P + +AG+NPC IR + E+P KS
Sbjct: 310 LPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKS 369
Query: 421 SLDPKIYGPSESAITTEMIESEIKGCTTVKEALNQKKLFILDYHDLFLPYVEQVRELGDR 480
+LDP IYG S IT + ++ + T+ EAL ++LF+LDYHD+F+PYV Q+ +L
Sbjct: 370 NLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSA 426
Query: 481 TLYGSRTVFYLNPDGTLRPLAIELTRPPMDG--KPQWKQAFTPSSDSTKSWLWKLAKAHV 538
Y +RT+ +L DGTL+P+AIEL+ P G Q P+ + +S +W LAKA+V
Sbjct: 427 KTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYV 486
Query: 539 LAHDSGYHQLISHWLRTHCSVEPYAIAAHRQLSAMHPINRLLKPHFRYTMEINSLARQSL 598
+ +DS YHQL+SHWL TH ++EP+ IA HR LS +HPI +LL PH+R M IN+LARQSL
Sbjct: 487 IVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSL 546
Query: 599 INAGGVIESTFLPGKYSMLLSSIIYDKQWRFDHQALPQDLISRGMAAKDPSSPHGLKLTI 658
INA G+IE+TFLP KYS+ +SS +Y K W F QALP DLI RG+A KDPS+PHG++L I
Sbjct: 547 INANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLI 605
Query: 659 EDYPFAQDGLDLWDIIKQWVTDYVSHYYPDPSLVESDEELQAWWTEIRTVGHGDKQDETW 718
EDYP+A DGL++W IK WV +YV YY V++D ELQ WW E GHGD +D+ W
Sbjct: 606 EDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPW 665
Query: 719 WPVLNSPKDLIDTITSIVWVASGLHAAVNFGQYEYAAYFPNRPTIARANMPNEDPSDDEW 778
WP L + +DL++ I+W+AS LHAAV FGQY Y NRPT +R +P + E+
Sbjct: 666 WPKLQTLEDLVEVCLIIIWIASALHAAVGFGQYPYGGLIMNRPTASRRLLPEK--GTPEY 723
Query: 779 QIFFERPEAALLTTFPNQRQATAVISVLDVLSAHSPDEDYLGKYMEPAWGEDKIIKGAFE 838
+ E A L T ++ +SV+++LS H+ DE YLG+ P W D AF+
Sbjct: 724 EEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQ 783
Query: 839 KFQGRLMELKGIINLRNADKNLK-NRHGAGSLPYELLMPLADKSGVTGKGVPYSISI 894
KF +L E++ + RN D +L+ NR G LPY LL P + + G+T +G+P SISI
Sbjct: 784 KFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYP-SSEEGLTFRGIPNSISI 839
>pdb|3BNC|A Chain A, Lipoxygenase-1 (Soybean) I553g Mutant
Length = 839
Score = 617 bits (1590), Expect = e-176, Method: Compositional matrix adjust.
Identities = 347/837 (41%), Positives = 487/837 (58%), Gaps = 39/837 (4%)
Query: 78 INPLTAGGQVIDDVEDLFSKSLQLELVSAKDEN---KPTISGNAKIKGV-----VVKDCE 129
+NP G +D++ +S+ L+L+SA + K + + ++G+ + E
Sbjct: 22 VNP---DGSAVDNLNAFLGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGE 78
Query: 130 VQYEAEFQVPVDFGEIGAILVVNEHALEMYLKDIVLDGLPS-GLVTITCESWVQPNTS-- 186
+ F+ G GA + N +E +LK + L+ + + G + C SWV NT
Sbjct: 79 SAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVY-NTKLY 137
Query: 187 KDPRIFFTNKSYLPSKTPNGLQKLRYAELVNLRGNGEGERQKADRIYDYDVYNDLGDPDE 246
K RIFF N +Y+PS+TP L + R EL +LRGNG GER++ DRIYDYDVYNDLG+PD+
Sbjct: 138 KSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDK 197
Query: 247 DEELKRPVLGGKQ-HPYPRRCRTGRPHCKTDEASEERVPSKSLIPISPYVPRDEEFSAIK 305
E+L RPVLGG PYPRR RTGR TD +E++ YVPRDE +K
Sbjct: 198 SEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVF-------YVPRDENLGHLK 250
Query: 306 ETTFVIRGLFGQLRSLIPNLKAEFVDTDGFP----NFTEIDKLFREGVKI-KDAEFWKSL 360
+ G + + P ++ F D P +F ++ L+ G+K+ +D
Sbjct: 251 SKDALEIGTKSLSQIVQPAFESAF-DLKSTPIEFHSFQDVHDLYEGGIKLPRDVISTIIP 309
Query: 361 LPGFVEEIKDIGDFFLRFTSPETFKXXXXXXXXXXXXXXXTLAGLNPCSIRLITEWPLKS 420
LP E + G L+F P + +AG+NPC IR + E+P KS
Sbjct: 310 LPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKS 369
Query: 421 SLDPKIYGPSESAITTEMIESEIKGCTTVKEALNQKKLFILDYHDLFLPYVEQVRELGDR 480
+LDP IYG S IT + ++ + T+ EAL ++LF+LDYHD+F+PYV Q+ +L
Sbjct: 370 NLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSA 426
Query: 481 TLYGSRTVFYLNPDGTLRPLAIELTRPPMDG--KPQWKQAFTPSSDSTKSWLWKLAKAHV 538
Y +RT+ +L DGTL+P+AIEL+ P G Q P+ + +S +W LAKA+V
Sbjct: 427 KTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYV 486
Query: 539 LAHDSGYHQLISHWLRTHCSVEPYAIAAHRQLSAMHPINRLLKPHFRYTMEINSLARQSL 598
+ +DS YHQL+SHWL TH ++EP+ IA HR LS +HPI +LL PH+R M IN+LARQSL
Sbjct: 487 IVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSL 546
Query: 599 INAGGVIESTFLPGKYSMLLSSIIYDKQWRFDHQALPQDLISRGMAAKDPSSPHGLKLTI 658
INA G+ E+TFLP KYS+ +SS +Y K W F QALP DLI RG+A KDPS+PHG++L I
Sbjct: 547 INANGIGETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLI 605
Query: 659 EDYPFAQDGLDLWDIIKQWVTDYVSHYYPDPSLVESDEELQAWWTEIRTVGHGDKQDETW 718
EDYP+A DGL++W IK WV +YV YY V++D ELQ WW E GHGD +D+ W
Sbjct: 606 EDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPW 665
Query: 719 WPVLNSPKDLIDTITSIVWVASGLHAAVNFGQYEYAAYFPNRPTIARANMPNEDPSDDEW 778
WP L + +DL++ I+W+AS LHAAVNFGQY Y NRPT +R +P + E+
Sbjct: 666 WPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLP--EKGTPEY 723
Query: 779 QIFFERPEAALLTTFPNQRQATAVISVLDVLSAHSPDEDYLGKYMEPAWGEDKIIKGAFE 838
+ E A L T ++ +SV+++LS H+ DE YLG+ P W D AF+
Sbjct: 724 EEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQ 783
Query: 839 KFQGRLMELKGIINLRNADKNLK-NRHGAGSLPYELLMPLADKSGVTGKGVPYSISI 894
KF +L E++ + RN D +L+ NR G LPY LL P + + G+T +G+P SISI
Sbjct: 784 KFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYP-SSEEGLTFRGIPNSISI 839
>pdb|3VF1|A Chain A, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests
A Mechanism For Ca-Regulation
pdb|3VF1|B Chain B, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests
A Mechanism For Ca-Regulation
Length = 698
Score = 183 bits (464), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 128/452 (28%), Positives = 210/452 (46%), Gaps = 43/452 (9%)
Query: 429 PSESAITTEMIESEIKGCTTVKEALNQKKLFILDYHDL-FLPYVEQVRELGDRTLYGSRT 487
P + EM+E + T+++A+ + +FI DY L +P ++ + R +
Sbjct: 277 PENFPVKNEMVEKLLDRGYTLEKAMKEGLIFITDYKILEGIPTMDTPED--KRYITTPLG 334
Query: 488 VFYLNPDGTLRPLAIELTRPPMDGKPQWKQAFTPSSDSTKSWLWKLAKAHVLAHDSGYHQ 547
+FYL + + P+AI+L + P + W TP D+ W W +AK + D+ YHQ
Sbjct: 335 LFYLKNNDDIIPIAIQLYQQPGENNSIW----TPLKDT--EWDWIMAKLWLRCADTQYHQ 388
Query: 548 LISHWLRTHCSVEPYAIAAHRQLSAMHPINRLLKPHFRYTMEINSLARQSLINAGGVIES 607
+I+H LR H +EP A+++ R L ++HP+ +LL PH + M IN+L R LI GG +
Sbjct: 389 MITHLLRCHLMMEPTAVSSWRNLPSVHPVWKLLYPHTKGIMAINTLGRNDLIPTGGAADK 448
Query: 608 TFLPGKYSMLLSSIIYDKQWRFDHQALPQDLISRGMAAKDPSSPHGLKLTIEDYPFAQDG 667
G + + + FD L +DL RG+ + + + D
Sbjct: 449 VLSIGGGGQVTLMQKHYRSVTFDSYDLVKDLRQRGVDG------------LRKFYYKDDA 496
Query: 668 LDLWDIIKQWVTDYVSHYYPDPSLVESDEELQAWWTEIRTVGH---GDKQDETWWPVLNS 724
L LW++I Q+V D + YY D V+ D E+Q W ++ G+ D D+ +
Sbjct: 497 LLLWNVIHQFVQDIIQIYYNDDDSVKKDNEIQDWIRDLHENGYPAGSDGTDKKVPKSFEN 556
Query: 725 PKDLIDTITSIVWVASGLHAAVNFGQYEYAAYFPNRPTIARANMPNEDPSDDEWQIFFER 784
++L+ +T +V+ S HAAVNF Q + PN PT+ R P E +
Sbjct: 557 REELVHFLTVVVFTCSCQHAAVNFSQMATYGFHPNSPTLMRQPPPTEKGKSN-------- 608
Query: 785 PEAALLTTFPNQRQATAVISVLDVLSAHSPDEDYLGKYMEPAWGEDKIIKGAFEKFQGRL 844
++ + N+ QA ++SV++ L+ P E +LG Y + +G D A KF+
Sbjct: 609 -HKVIMASLANKHQAVTMVSVVNALTTIYPTEKFLGDYADNLFG-DAAAHAAMAKFKS-- 664
Query: 845 MELKGIINLRNADKNLKNRHGAGSLPYELLMP 876
NL N K + R+ PY L+P
Sbjct: 665 -------NLANITKQITERNQGMVSPYTWLIP 689
>pdb|3V92|B Chain B, S663a Stable-5-Lox
pdb|3V92|A Chain A, S663a Stable-5-Lox
Length = 691
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 145/478 (30%), Positives = 228/478 (47%), Gaps = 53/478 (11%)
Query: 402 LAGLNPCSIRLITEWPLKSSLDPKIYGPSESAITTEMIESEIKGCTTVKEALNQKKLFIL 461
L G NP IR TE P K +TTEM+E ++ ++++ + Q +FI+
Sbjct: 255 LNGANPVLIRRCTELPEKLP------------VTTEMVECSLERQLSLEQEVQQGNIFIV 302
Query: 462 DYHDLFLPYVEQVRELGDRTLYGSRTVFYLNPDGTLRPLAIELTRPPMDGKPQWKQAFTP 521
D+ L + + L + Y N + P+AI+L + P D P F P
Sbjct: 303 DFELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIPGDENP----IFLP 358
Query: 522 SSDSTKSWLWKLAKAHVLAHDSGYHQLISHWLRTHCSVEPYAIAAHRQLSAMHPINRLLK 581
S D+ WL LAK V + D HQ I+H LRTH E + IA +RQL A+HPI +LL
Sbjct: 359 S-DAKYDWL--LAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQLPAVHPIFKLLV 415
Query: 582 PHFRYTMEINSLARQSLINAGGVIE---STFLPGKYSMLLSSIIYDKQWRFDHQALPQDL 638
H R+T+ IN+ AR+ LI G+ + +T G M+ ++ K + P+ +
Sbjct: 416 AHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAM---KDLTYASLCFPEAI 472
Query: 639 ISRGMAAKDPSSPHGLKLTIEDYPFAQDGLDLWDIIKQWVTDYVSHYYPDPSLVESDEEL 698
+RGM +K+ I Y + DGL +W+ I+ + + V YY +VE D EL
Sbjct: 473 KARGMESKE---------DIPYYFYRDDGLLVWEAIRTFTAEVVDIYYEGDQVVEEDPEL 523
Query: 699 QAWWTEIRTVGHGDKQDETWWPVLNSPKDLIDTITSIVWVASGLHAAVNFGQYEYAAYFP 758
Q + ++ G ++ + + S + L + +T +++ AS HAAVNFGQY++A++ P
Sbjct: 524 QDFVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAAVNFGQYDWASWIP 583
Query: 759 NRPTIARANMPNEDPSDDEWQIFFERPEAALLTTFPNQRQATAVISVLDVLSAHSPDEDY 818
N P RA P QI + T P++ ++ + + LS +E +
Sbjct: 584 NAPPTMRAPPPTAKGVVTIEQI---------VDTLPDRGRSCWHLGAVWALSQFQENELF 634
Query: 819 LGKYMEPAWGEDKIIKGAFEKFQGRLMELKGIINLRNADKNLKNRHGAGSLPYELLMP 876
LG Y E + E K +K A +F+ L + +I RN +NL+ LPY L P
Sbjct: 635 LGMYPEEHFIE-KPVKEAMARFRKNLEAIVSVIAERN--ENLQ-------LPYYYLAP 682
>pdb|3O8Y|A Chain A, Stable-5-Lipoxygenase
pdb|3O8Y|B Chain B, Stable-5-Lipoxygenase
Length = 691
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 145/478 (30%), Positives = 228/478 (47%), Gaps = 53/478 (11%)
Query: 402 LAGLNPCSIRLITEWPLKSSLDPKIYGPSESAITTEMIESEIKGCTTVKEALNQKKLFIL 461
L G NP IR TE P K +TTEM+E ++ ++++ + Q +FI+
Sbjct: 255 LNGANPVLIRRCTELPEKLP------------VTTEMVECSLERQLSLEQEVQQGNIFIV 302
Query: 462 DYHDLFLPYVEQVRELGDRTLYGSRTVFYLNPDGTLRPLAIELTRPPMDGKPQWKQAFTP 521
D+ L + + L + Y N + P+AI+L + P D P F P
Sbjct: 303 DFELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIPGDENP----IFLP 358
Query: 522 SSDSTKSWLWKLAKAHVLAHDSGYHQLISHWLRTHCSVEPYAIAAHRQLSAMHPINRLLK 581
S D+ WL LAK V + D HQ I+H LRTH E + IA +RQL A+HPI +LL
Sbjct: 359 S-DAKYDWL--LAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQLPAVHPIFKLLV 415
Query: 582 PHFRYTMEINSLARQSLINAGGVIE---STFLPGKYSMLLSSIIYDKQWRFDHQALPQDL 638
H R+T+ IN+ AR+ LI G+ + +T G M+ ++ K + P+ +
Sbjct: 416 AHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAM---KDLTYASLCFPEAI 472
Query: 639 ISRGMAAKDPSSPHGLKLTIEDYPFAQDGLDLWDIIKQWVTDYVSHYYPDPSLVESDEEL 698
+RGM +K+ I Y + DGL +W+ I+ + + V YY +VE D EL
Sbjct: 473 KARGMESKE---------DIPYYFYRDDGLLVWEAIRTFTAEVVDIYYEGDQVVEEDPEL 523
Query: 699 QAWWTEIRTVGHGDKQDETWWPVLNSPKDLIDTITSIVWVASGLHAAVNFGQYEYAAYFP 758
Q + ++ G ++ + + S + L + +T +++ AS HAAVNFGQY++A++ P
Sbjct: 524 QDFVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAAVNFGQYDWASWIP 583
Query: 759 NRPTIARANMPNEDPSDDEWQIFFERPEAALLTTFPNQRQATAVISVLDVLSAHSPDEDY 818
N P RA P QI + T P++ ++ + + LS +E +
Sbjct: 584 NAPPTMRAPPPTAKGVVTIEQI---------VDTLPDRGRSCWHLGAVWALSQFQENELF 634
Query: 819 LGKYMEPAWGEDKIIKGAFEKFQGRLMELKGIINLRNADKNLKNRHGAGSLPYELLMP 876
LG Y E + E K +K A +F+ L + +I RN +NL+ LPY L P
Sbjct: 635 LGMYPEEHFIE-KPVKEAMARFRKNLEAIVSVIAERN--ENLQ-------LPYYYLSP 682
>pdb|3DY5|A Chain A, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura
Homomalla
pdb|3DY5|C Chain C, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura
Homomalla
Length = 1066
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 132/467 (28%), Positives = 222/467 (47%), Gaps = 53/467 (11%)
Query: 429 PSESAITTEMIESEIKGCTTVKEALNQKKLFILDYHDLFL------PYVEQV-------- 474
PS +T E + + + + E + ++I+D+ L P +E +
Sbjct: 625 PSNFPVTNEHVNASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHL 684
Query: 475 --RELGDRTLYGSRTVFYLNPDGTLRPLAIELTRPPMDGKPQWKQAFTPSSDSTKSWLWK 532
E R +FY+N G L P+AI++ + P P W TP ++ W+
Sbjct: 685 KHDEADIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIW----TPHEENEHDWM-- 738
Query: 533 LAKAHVLAHDSGYHQLISHWLRTHCSVEPYAIAAHRQLSAMHPINRLLKPHFRYTMEINS 592
+AK + +S +HQL +H LRTH + E +A++ R L++ HPI +LL+PH + I++
Sbjct: 739 MAKFWLGVAESNFHQLNTHLLRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDT 798
Query: 593 LARQSLINAGGVIESTFLPGKYSMLLSSIIYDKQWRFDHQALPQDLISRGMAAKDPSSPH 652
+ R+ LI +GG+++ + G + K+ LP L RG+ DPS
Sbjct: 799 IGRKELIGSGGIVDQSLSLGGGGHVTFMEKCFKEVNLQDYHLPNALKKRGV--DDPSKLP 856
Query: 653 GLKLTIEDYPFAQDGLDLWDIIKQWVTDYVSHYYPDPSLVESDEELQAWWTEIRTVG--- 709
G + + DGL LW+ I+ ++ + ++ +Y + V+ D E+Q+W ++ G
Sbjct: 857 G-------FYYRDDGLALWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRV 909
Query: 710 HGDKQDETWWPVLNSPKDLIDTITSIVWVASGLHAAVNFGQYEYAAYFPNRPTIARANMP 769
+ QD S + L + +TS+V+ S HAAVNF Q ++ + PN P I R P
Sbjct: 910 NPGHQDHGVPASFESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPP 969
Query: 770 NEDPSDDEWQIFFERPEAALLTTFPNQRQATAVISVLDVLSAHSPDEDYLGKYMEPAWGE 829
+ E ++L+T P++ QA I+ + +L+ S DE YLG Y AW E
Sbjct: 970 KKKG---------EATLQSILSTLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAW-E 1019
Query: 830 DKIIKGAFEKFQGRLMELKGIINLRNADKNLKNRHGAGSLPYELLMP 876
DK A +FQ +L ++ I RN +NL+ +PY L+P
Sbjct: 1020 DKDALDAINRFQDKLEDISKKIKQRN--ENLE-------VPYIYLLP 1057
>pdb|3V98|A Chain A, S663d Stable-5-Lox
pdb|3V98|B Chain B, S663d Stable-5-Lox
pdb|3V99|A Chain A, S663d Stable-5-Lox In Complex With Arachidonic Acid
pdb|3V99|B Chain B, S663d Stable-5-Lox In Complex With Arachidonic Acid
Length = 691
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 145/478 (30%), Positives = 228/478 (47%), Gaps = 53/478 (11%)
Query: 402 LAGLNPCSIRLITEWPLKSSLDPKIYGPSESAITTEMIESEIKGCTTVKEALNQKKLFIL 461
L G NP IR TE P K +TTEM+E ++ ++++ + Q +FI+
Sbjct: 255 LNGANPVLIRRCTELPEKLP------------VTTEMVECSLERQLSLEQEVQQGNIFIV 302
Query: 462 DYHDLFLPYVEQVRELGDRTLYGSRTVFYLNPDGTLRPLAIELTRPPMDGKPQWKQAFTP 521
D+ L + + L + Y N + P+AI+L + P D P F P
Sbjct: 303 DFELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIPGDENP----IFLP 358
Query: 522 SSDSTKSWLWKLAKAHVLAHDSGYHQLISHWLRTHCSVEPYAIAAHRQLSAMHPINRLLK 581
S D+ WL LAK V + D HQ I+H LRTH E + IA +RQL A+HPI +LL
Sbjct: 359 S-DAKYDWL--LAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQLPAVHPIFKLLV 415
Query: 582 PHFRYTMEINSLARQSLINAGGVIE---STFLPGKYSMLLSSIIYDKQWRFDHQALPQDL 638
H R+T+ IN+ AR+ LI G+ + +T G M+ ++ K + P+ +
Sbjct: 416 AHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAM---KDLTYASLCFPEAI 472
Query: 639 ISRGMAAKDPSSPHGLKLTIEDYPFAQDGLDLWDIIKQWVTDYVSHYYPDPSLVESDEEL 698
+RGM +K+ I Y + DGL +W+ I+ + + V YY +VE D EL
Sbjct: 473 KARGMESKE---------DIPYYFYRDDGLLVWEAIRTFTAEVVDIYYEGDQVVEEDPEL 523
Query: 699 QAWWTEIRTVGHGDKQDETWWPVLNSPKDLIDTITSIVWVASGLHAAVNFGQYEYAAYFP 758
Q + ++ G ++ + + S + L + +T +++ AS HAAVNFGQY++A++ P
Sbjct: 524 QDFVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAAVNFGQYDWASWIP 583
Query: 759 NRPTIARANMPNEDPSDDEWQIFFERPEAALLTTFPNQRQATAVISVLDVLSAHSPDEDY 818
N P RA P QI + T P++ ++ + + LS +E +
Sbjct: 584 NAPPTMRAPPPTAKGVVTIEQI---------VDTLPDRGRSCWHLGAVWALSQFQENELF 634
Query: 819 LGKYMEPAWGEDKIIKGAFEKFQGRLMELKGIINLRNADKNLKNRHGAGSLPYELLMP 876
LG Y E + E K +K A +F+ L + +I RN +NL+ LPY L P
Sbjct: 635 LGMYPEEHFIE-KPVKEAMARFRKNLEAIVSVIAERN--ENLQ-------LPYYYLDP 682
>pdb|3FG1|A Chain A, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|B Chain B, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|C Chain C, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|D Chain D, Crystal Structure Of Delta413-417:gs Lox
Length = 696
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 132/467 (28%), Positives = 222/467 (47%), Gaps = 53/467 (11%)
Query: 429 PSESAITTEMIESEIKGCTTVKEALNQKKLFILDYHDLFL------PYVEQV-------- 474
PS +T E + + + + E + ++I+D+ L P +E +
Sbjct: 255 PSNFPVTNEHVNASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHL 314
Query: 475 --RELGDRTLYGSRTVFYLNPDGTLRPLAIELTRPPMDGKPQWKQAFTPSSDSTKSWLWK 532
E R +FY+N G L P+AI++ + P P W TP ++ W+
Sbjct: 315 KHDEADIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIW----TPHEENEHDWM-- 368
Query: 533 LAKAHVLAHDSGYHQLISHWLRTHCSVEPYAIAAHRQLSAMHPINRLLKPHFRYTMEINS 592
+AK + +S +HQL +H LRTH + E +A++ R L++ HPI +LL+PH + I++
Sbjct: 369 MAKFWLGVAESNFHQLNTHLLRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDT 428
Query: 593 LARQSLINAGGVIESTFLPGKYSMLLSSIIYDKQWRFDHQALPQDLISRGMAAKDPSSPH 652
+ R+ LI +GG+++ + G + K+ LP L RG+ DPS
Sbjct: 429 IGRKELIGSGGIVDQSLSLGGGGHVTFMEKCFKEVNLQDYHLPNALKKRGV--DDPSKLP 486
Query: 653 GLKLTIEDYPFAQDGLDLWDIIKQWVTDYVSHYYPDPSLVESDEELQAWWTEIRTVG--- 709
G + + DGL LW+ I+ ++ + ++ +Y + V+ D E+Q+W ++ G
Sbjct: 487 G-------FYYRDDGLALWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRV 539
Query: 710 HGDKQDETWWPVLNSPKDLIDTITSIVWVASGLHAAVNFGQYEYAAYFPNRPTIARANMP 769
+ QD S + L + +TS+V+ S HAAVNF Q ++ + PN P I R P
Sbjct: 540 NPGHQDHGVPASFESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPP 599
Query: 770 NEDPSDDEWQIFFERPEAALLTTFPNQRQATAVISVLDVLSAHSPDEDYLGKYMEPAWGE 829
+ E ++L+T P++ QA I+ + +L+ S DE YLG Y AW E
Sbjct: 600 KKKG---------EATLQSILSTLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAW-E 649
Query: 830 DKIIKGAFEKFQGRLMELKGIINLRNADKNLKNRHGAGSLPYELLMP 876
DK A +FQ +L ++ I RN +NL+ +PY L+P
Sbjct: 650 DKDALDAINRFQDKLEDISKKIKQRN--ENLE-------VPYIYLLP 687
>pdb|2FNQ|A Chain A, Insights From The X-Ray Crystal Structure Of Coral 8r-
Lipoxygenase: Calcium Activation Via A C2-Like Domain
And A Structural Basis Of Product Chirality
pdb|2FNQ|B Chain B, Insights From The X-Ray Crystal Structure Of Coral 8r-
Lipoxygenase: Calcium Activation Via A C2-Like Domain
And A Structural Basis Of Product Chirality
Length = 699
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 130/467 (27%), Positives = 222/467 (47%), Gaps = 53/467 (11%)
Query: 429 PSESAITTEMIESEIKGCTTVKEALNQKKLFILDYHDLFL------PYVEQV-------- 474
PS +T E + + + + E + ++I+D+ L P +E +
Sbjct: 258 PSNFPVTNEHVNASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHL 317
Query: 475 --RELGDRTLYGSRTVFYLNPDGTLRPLAIELTRPPMDGKPQWKQAFTPSSDSTKSWLWK 532
E R +FY+N G L P+AI++ + P P W TP ++ W+
Sbjct: 318 KHDEADIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIW----TPHEENEHDWM-- 371
Query: 533 LAKAHVLAHDSGYHQLISHWLRTHCSVEPYAIAAHRQLSAMHPINRLLKPHFRYTMEINS 592
+AK + +S +HQL +H LRTH + E +A++ R L++ HP+ +LL+PH + I++
Sbjct: 372 MAKFWLGVAESNFHQLNTHLLRTHLTTESFALSTWRNLASAHPVFKLLQPHIYGVLAIDT 431
Query: 593 LARQSLINAGGVIESTFLPGKYSMLLSSIIYDKQWRFDHQALPQDLISRGMAAKDPSSPH 652
+ R+ LI +GG+++ + G + K+ LP L RG+ DPS
Sbjct: 432 IGRKELIGSGGIVDQSLSLGGGGHVTFMEKCFKEVNLQDYHLPNALKKRGV--DDPSKLP 489
Query: 653 GLKLTIEDYPFAQDGLDLWDIIKQWVTDYVSHYYPDPSLVESDEELQAWWTEIRTVG--- 709
G + + DGL LW+ I+ ++ + ++ +Y + V+ D E+Q+W ++ G
Sbjct: 490 G-------FYYRDDGLALWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRV 542
Query: 710 HGDKQDETWWPVLNSPKDLIDTITSIVWVASGLHAAVNFGQYEYAAYFPNRPTIARANMP 769
+ QD S + L + +TS+V+ S HAAVNF Q ++ + PN P + R P
Sbjct: 543 NPGHQDHGVPASFESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAVLRHPPP 602
Query: 770 NEDPSDDEWQIFFERPEAALLTTFPNQRQATAVISVLDVLSAHSPDEDYLGKYMEPAWGE 829
+ E ++L+T P++ QA I+ + +L+ S DE YLG Y AW E
Sbjct: 603 KKKG---------EATLQSILSTLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAW-E 652
Query: 830 DKIIKGAFEKFQGRLMELKGIINLRNADKNLKNRHGAGSLPYELLMP 876
DK A +FQ +L ++ I RN +NL+ +PY L+P
Sbjct: 653 DKDALDAINRFQDKLEDISKKIKQRN--ENLE-------VPYIYLLP 690
>pdb|3FG4|A Chain A, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|B Chain B, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|C Chain C, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|D Chain D, Crystal Structure Of Delta413-417:gs I805a Lox
Length = 696
Score = 177 bits (449), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 131/467 (28%), Positives = 221/467 (47%), Gaps = 53/467 (11%)
Query: 429 PSESAITTEMIESEIKGCTTVKEALNQKKLFILDYHDLFL------PYVEQV-------- 474
PS +T E + + + + E + ++I+D+ L P +E +
Sbjct: 255 PSNFPVTNEHVNASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHL 314
Query: 475 --RELGDRTLYGSRTVFYLNPDGTLRPLAIELTRPPMDGKPQWKQAFTPSSDSTKSWLWK 532
E R +FY+N G L P+AI++ + P P W TP ++ W+
Sbjct: 315 KHDEADIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIW----TPHEENEHDWM-- 368
Query: 533 LAKAHVLAHDSGYHQLISHWLRTHCSVEPYAIAAHRQLSAMHPINRLLKPHFRYTMEINS 592
+AK + +S +HQL +H LRTH + E +A++ R L++ HPI +LL+PH + I++
Sbjct: 369 MAKFWLGVAESNFHQLNTHLLRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDT 428
Query: 593 LARQSLINAGGVIESTFLPGKYSMLLSSIIYDKQWRFDHQALPQDLISRGMAAKDPSSPH 652
+ R+ L +GG+++ + G + K+ LP L RG+ DPS
Sbjct: 429 IGRKELAGSGGIVDQSLSLGGGGHVTFMEKCFKEVNLQDYHLPNALKKRGV--DDPSKLP 486
Query: 653 GLKLTIEDYPFAQDGLDLWDIIKQWVTDYVSHYYPDPSLVESDEELQAWWTEIRTVG--- 709
G + + DGL LW+ I+ ++ + ++ +Y + V+ D E+Q+W ++ G
Sbjct: 487 G-------FYYRDDGLALWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRV 539
Query: 710 HGDKQDETWWPVLNSPKDLIDTITSIVWVASGLHAAVNFGQYEYAAYFPNRPTIARANMP 769
+ QD S + L + +TS+V+ S HAAVNF Q ++ + PN P I R P
Sbjct: 540 NPGHQDHGVPASFESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPP 599
Query: 770 NEDPSDDEWQIFFERPEAALLTTFPNQRQATAVISVLDVLSAHSPDEDYLGKYMEPAWGE 829
+ E ++L+T P++ QA I+ + +L+ S DE YLG Y AW E
Sbjct: 600 KKKG---------EATLQSILSTLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAW-E 649
Query: 830 DKIIKGAFEKFQGRLMELKGIINLRNADKNLKNRHGAGSLPYELLMP 876
DK A +FQ +L ++ I RN +NL+ +PY L+P
Sbjct: 650 DKDALDAINRFQDKLEDISKKIKQRN--ENLE-------VPYIYLLP 687
>pdb|3FG3|A Chain A, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|B Chain B, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|C Chain C, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|D Chain D, Crystal Structure Of Delta413-417:gs I805w Lox
Length = 696
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 131/467 (28%), Positives = 221/467 (47%), Gaps = 53/467 (11%)
Query: 429 PSESAITTEMIESEIKGCTTVKEALNQKKLFILDYHDLFL------PYVEQV-------- 474
PS +T E + + + + E + ++I+D+ L P +E +
Sbjct: 255 PSNFPVTNEHVNASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHL 314
Query: 475 --RELGDRTLYGSRTVFYLNPDGTLRPLAIELTRPPMDGKPQWKQAFTPSSDSTKSWLWK 532
E R +FY+N G L P+AI++ + P P W TP ++ W+
Sbjct: 315 KHDEADIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIW----TPHEENEHDWM-- 368
Query: 533 LAKAHVLAHDSGYHQLISHWLRTHCSVEPYAIAAHRQLSAMHPINRLLKPHFRYTMEINS 592
+AK + +S +HQL +H LRTH + E +A++ R L++ HPI +LL+PH + I++
Sbjct: 369 MAKFWLGVAESNFHQLNTHLLRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDT 428
Query: 593 LARQSLINAGGVIESTFLPGKYSMLLSSIIYDKQWRFDHQALPQDLISRGMAAKDPSSPH 652
+ R+ L +GG+++ + G + K+ LP L RG+ DPS
Sbjct: 429 IGRKELWGSGGIVDQSLSLGGGGHVTFMEKCFKEVNLQDYHLPNALKKRGV--DDPSKLP 486
Query: 653 GLKLTIEDYPFAQDGLDLWDIIKQWVTDYVSHYYPDPSLVESDEELQAWWTEIRTVG--- 709
G + + DGL LW+ I+ ++ + ++ +Y + V+ D E+Q+W ++ G
Sbjct: 487 G-------FYYRDDGLALWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRV 539
Query: 710 HGDKQDETWWPVLNSPKDLIDTITSIVWVASGLHAAVNFGQYEYAAYFPNRPTIARANMP 769
+ QD S + L + +TS+V+ S HAAVNF Q ++ + PN P I R P
Sbjct: 540 NPGHQDHGVPASFESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPP 599
Query: 770 NEDPSDDEWQIFFERPEAALLTTFPNQRQATAVISVLDVLSAHSPDEDYLGKYMEPAWGE 829
+ E ++L+T P++ QA I+ + +L+ S DE YLG Y AW E
Sbjct: 600 KKKG---------EATLQSILSTLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAW-E 649
Query: 830 DKIIKGAFEKFQGRLMELKGIINLRNADKNLKNRHGAGSLPYELLMP 876
DK A +FQ +L ++ I RN +NL+ +PY L+P
Sbjct: 650 DKDALDAINRFQDKLEDISKKIKQRN--ENLE-------VPYIYLLP 687
>pdb|3RDE|A Chain A, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|B Chain B, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|C Chain C, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|D Chain D, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
Length = 573
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 123/393 (31%), Positives = 179/393 (45%), Gaps = 43/393 (10%)
Query: 487 TVFYLNPDGTLRPLAIELTRPPMDGKPQWKQAFTPSSDSTKSWLWKLAKAHVLAHDSGYH 546
+ L PDG L P+ I+L + P +G P F P+ +W LAK V + D H
Sbjct: 212 VMLKLQPDGKLLPMVIQL-QLPREGSP-LPPLFLPTDPPM---VWLLAKCWVRSSDFQLH 266
Query: 547 QLISHWLRTHCSVEPYAIAAHRQLSAMHPINRLLKPHFRYTMEINSLARQSLINAGGVIE 606
+L SH LR H E A+A R L ++HPI +LL PHFRYTMEIN AR L++ G+ +
Sbjct: 267 ELHSHLLRGHLMAEVIAVATMRCLPSIHPIFKLLIPHFRYTMEINVRARNGLVSDLGIFD 326
Query: 607 ---STFLPGKYSMLLSSIIYDKQWRFDHQALPQDLISRGMAAKDPSSPHGLKLTIEDYPF 663
ST G +L + F P DL RG+ L +E +
Sbjct: 327 QVVSTGGGGHVELLRRAAALLTYSSF---CPPDDLADRGL------------LGVESSFY 371
Query: 664 AQDGLDLWDIIKQWVTDYVSHYYPDPSLVESDEELQAWWTEIRTVGHGDKQDETWWPVLN 723
AQD L LW++I ++V VS +Y V+ D ELQAW E +G QD + L
Sbjct: 372 AQDALRLWEVISRYVEGIVSLHYKTDESVKEDFELQAWCREFTEIGLLGAQDRGFPVSLQ 431
Query: 724 SPKDLIDTITSIVWVASGLHAAVNFGQYEYAAYFPNRPTIARANMPNEDPSDDEWQIFFE 783
S + L +T ++ +G H++ + GQ ++ + PN P R P + E
Sbjct: 432 SKEQLCHFVTMCIFTCTGQHSSNHLGQLDWYTWVPNAPCTMRLPPPTTKDATLE------ 485
Query: 784 RPEAALLTTFPNQRQATAVISVLDVLSAHSPDEDYLGKYMEPAWGEDKIIKGAFEKFQGR 843
++ T PN QA+ +S+ L P LG++ E + K KF+
Sbjct: 486 ----TVMATLPNFHQASLQMSITWQLGRCQPTMVALGQH-EEEYFSGPGPKAVLTKFREE 540
Query: 844 LMELKGIINLRNADKNLKNRHGAGSLPYELLMP 876
L L DK+++ R+ +LPYE L P
Sbjct: 541 LAAL---------DKDIEVRNAKLALPYEYLRP 564
>pdb|3D3L|A Chain A, The 2.6 A Crystal Structure Of The Lipoxygenase Domain Of
Human Arachidonate 12-Lipoxygenase, 12s-Type (Casp
Target)
pdb|3D3L|B Chain B, The 2.6 A Crystal Structure Of The Lipoxygenase Domain Of
Human Arachidonate 12-Lipoxygenase, 12s-Type (Casp
Target)
Length = 541
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 122/398 (30%), Positives = 176/398 (44%), Gaps = 36/398 (9%)
Query: 487 TVFYLNPDGTLRPLAIELTRPPMDGKPQWKQAFTPSSDSTKSWLWKLAKAHVLAHDSGYH 546
+ + P+G L+P+ I++ P F PS D +WL LAK+ V D H
Sbjct: 147 VMLKMEPNGKLQPMVIQIQPPNPSSPT--PTLFLPS-DPPLAWL--LAKSWVRNSDFQLH 201
Query: 547 QLISHWLRTHCSVEPYAIAAHRQLSAMHPINRLLKPHFRYTMEINSLARQSLINAGGVIE 606
++ H L TH E A+A R L +HPI + L PH RYTMEIN+ AR LI+ GG+ +
Sbjct: 202 EIQYHLLNTHLVAEVIAVATMRCLPGLHPIFKFLIPHIRYTMEINTRARTQLISDGGIFD 261
Query: 607 STFLPGKYSMLLSSIIYDKQWRFDHQALPQDLISRGMAAKDPSSPHGLKLTIEDYPFAQD 666
G + Q + P DL RG+ L + +A D
Sbjct: 262 KAVSTGGGGHVQLLRRAAAQLTYCSLCPPDDLADRGL------------LGLPGALYAHD 309
Query: 667 GLDLWDIIKQWVTDYVSHYYPDPSLVESDEELQAWWTEIRTVGHGDKQDETWWPVLNSPK 726
L LW+II ++V V +Y +V+ D ELQAW EI VG QD + S
Sbjct: 310 ALRLWEIIARYVEGIVHLFYQRDDIVKGDPELQAWCREITEVGLCQAQDRGFPVSFQSQS 369
Query: 727 DLIDTITSIVWVASGLHAAVNFGQYEYAAYFPNRPTIARANMPNEDPSDDEWQIFFERPE 786
L +T V+ + HAA+N GQ ++ A+ PN P R MP +D
Sbjct: 370 QLCHFLTMCVFTCTAQHAAINQGQLDWYAWVPNAPCTMR--MPPPTTKEDV-------TM 420
Query: 787 AALLTTFPNQRQATAVISVLDVLSAHSPDEDYLGKYMEPAWGEDKIIKGAFEKFQGRLME 846
A ++ + P+ RQA +++ LS PD LG + E + K K +F+ L +
Sbjct: 421 ATVMGSLPDVRQACLQMAISWHLSRRQPDMVPLGHHKEKYFSGPK-PKAVLNQFRTDLEK 479
Query: 847 LKGIINLRNADKNLKNRHGAGSLPYELLMPLADKSGVT 884
L+ I RN + PYE L P ++ VT
Sbjct: 480 LEKEITARNEQLD---------WPYEYLKPSCIENSVT 508
>pdb|1LOX|A Chain A, Rabbit Reticulocyte 15-Lipoxygenase
Length = 662
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 177/393 (45%), Gaps = 43/393 (10%)
Query: 487 TVFYLNPDGTLRPLAIELTRPPMDGKPQWKQAFTPSSDSTKSWLWKLAKAHVLAHDSGYH 546
+ L PDG L P+ I+L P + P F P+ +W LAK V + D H
Sbjct: 301 VMLKLQPDGKLMPMVIQLHLPKIGSSP--PPLFLPTDPPM---VWLLAKCWVRSSDFQVH 355
Query: 547 QLISHWLRTHCSVEPYAIAAHRQLSAMHPINRLLKPHFRYTMEINSLARQSLINAGGV-- 604
+L SH LR H E + +A R L ++HP+ +L+ PH RYT+EIN AR L++ G+
Sbjct: 356 ELNSHLLRGHLMAEVFTVATMRCLPSIHPVFKLIVPHLRYTLEINVRARNGLVSDFGIFD 415
Query: 605 -IESTFLPGKYSMLLSSIIYDKQWRFDHQALPQDLISRGMAAKDPSSPHGLKLTIEDYPF 663
I ST G +L + + F P DL RG+ L +E +
Sbjct: 416 QIMSTGGGGHVQLLQQAGAFLTYRSF---CPPDDLADRGL------------LGVESSFY 460
Query: 664 AQDGLDLWDIIKQWVTDYVSHYYPDPSLVESDEELQAWWTEIRTVGHGDKQDETWWPVLN 723
AQD L LW+II ++V + YY V D ELQ+W EI +G Q + + L
Sbjct: 461 AQDALRLWEIISRYVQGIMGLYYKTDEAVRDDLELQSWCREITEIGLQGAQKQGFPTSLQ 520
Query: 724 SPKDLIDTITSIVWVASGLHAAVNFGQYEYAAYFPNRPTIARANMPNEDPSDDEWQIFFE 783
S +T ++ +G H++++ GQ ++ + PN P R P + E
Sbjct: 521 SVAQACHFVTMCIFTCTGQHSSIHLGQLDWFTWVPNAPCTMRLPPPTTKDATLE------ 574
Query: 784 RPEAALLTTFPNQRQATAVISVLDVLSAHSPDEDYLGKYMEPAWGEDKIIKGAFEKFQGR 843
++ T PN +Q++ +S++ L P LG++ E + + + EKF+
Sbjct: 575 ----TVMATLPNLKQSSLQMSIVWQLGRDQPIMVPLGQHQEEYFSGPE-PRAVLEKFREE 629
Query: 844 LMELKGIINLRNADKNLKNRHGAGSLPYELLMP 876
L + DK ++ R+ +PYE L P
Sbjct: 630 LAIM---------DKEIEVRNEKLDIPYEYLRP 653
>pdb|2P0M|A Chain A, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase
pdb|2P0M|B Chain B, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase
Length = 662
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 176/393 (44%), Gaps = 43/393 (10%)
Query: 487 TVFYLNPDGTLRPLAIELTRPPMDGKPQWKQAFTPSSDSTKSWLWKLAKAHVLAHDSGYH 546
+ L PDG L P+ I+L P + P F P+ +W LAK V + D H
Sbjct: 301 VMLKLQPDGKLMPMVIQLHLPKIGSSP--PPLFLPTDPPM---VWLLAKCWVRSSDFQVH 355
Query: 547 QLISHWLRTHCSVEPYAIAAHRQLSAMHPINRLLKPHFRYTMEINSLARQSLINAGGV-- 604
+L SH LR H E + +A R L ++HP+ +L+ PH RYT+EIN AR L++ G+
Sbjct: 356 ELNSHLLRGHLMAEVFTVATMRCLPSIHPVFKLIVPHLRYTLEINVRARNGLVSDFGIFD 415
Query: 605 -IESTFLPGKYSMLLSSIIYDKQWRFDHQALPQDLISRGMAAKDPSSPHGLKLTIEDYPF 663
I ST G +L + + F P DL RG+ L +E +
Sbjct: 416 QIMSTGGGGHVQLLQQAGAFLTYRSF---CPPDDLADRGL------------LGVESSFY 460
Query: 664 AQDGLDLWDIIKQWVTDYVSHYYPDPSLVESDEELQAWWTEIRTVGHGDKQDETWWPVLN 723
AQD L LW+II ++V + YY V D ELQ+W EI +G Q + + L
Sbjct: 461 AQDALRLWEIISRYVQGIMGLYYKTDEAVRDDLELQSWCREITEIGLQGAQKQGFPTSLQ 520
Query: 724 SPKDLIDTITSIVWVASGLHAAVNFGQYEYAAYFPNRPTIARANMPNEDPSDDEWQIFFE 783
S +T ++ +G H++++ GQ ++ + PN P R P + E
Sbjct: 521 SVAQACHFVTMCIFTCTGQHSSIHLGQLDWFTWVPNAPCTMRLPPPTTKDATLE------ 574
Query: 784 RPEAALLTTFPNQRQATAVISVLDVLSAHSPDEDYLGKYMEPAWGEDKIIKGAFEKFQGR 843
++ T PN Q++ +S++ L P LG++ E + + + EKF+
Sbjct: 575 ----TVMATLPNLHQSSLQMSIVWQLGRDQPIMVPLGQHQEEYFSGPE-PRAVLEKFREE 629
Query: 844 LMELKGIINLRNADKNLKNRHGAGSLPYELLMP 876
L + DK ++ R+ +PYE L P
Sbjct: 630 LAIM---------DKEIEVRNEKLDIPYEYLRP 653
>pdb|2KZ6|A Chain A, Solution Structure Of Protein Cv0426 From Chromobacterium
Violaceum, Northeast Structural Genomics Consortium
(Nesg) Target Cvt2
Length = 102
Score = 33.1 bits (74), Expect = 0.62, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 8/101 (7%)
Query: 641 RGMAAKDPSSPHGLKLTIEDYPFAQDGLDLWDIIKQWVTDYVSHYYPDPSLVESDEELQA 700
+GM +P G L + + Q+ D++ +Q + D +E DE L+A
Sbjct: 1 QGMLLHSVETPRGEILNVSE----QEARDVFGASEQAIADARKATILQTLRIERDERLRA 56
Query: 701 W-WTEIRTVGHGDKQDETWWPVLNSPKDLIDTIT---SIVW 737
WT+++ V Q TW + +DL +T+T IVW
Sbjct: 57 CDWTQVQDVVLTADQKATWAKYRQALRDLPETVTDLSQIVW 97
>pdb|3DS0|A Chain A, Hiv-1 Capsid C-Terminal Domain Mutant (N183a) In Complex
With An Inhibitor Of Particle Assembly (Cai)
pdb|3DS5|A Chain A, Hiv-1 Capsid C-Terminal Domain Mutant (N183a)
pdb|3DS5|B Chain B, Hiv-1 Capsid C-Terminal Domain Mutant (N183a)
pdb|3DS5|C Chain C, Hiv-1 Capsid C-Terminal Domain Mutant (N183a)
pdb|3DS5|D Chain D, Hiv-1 Capsid C-Terminal Domain Mutant (N183a)
Length = 86
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 34/78 (43%)
Query: 668 LDLWDIIKQWVTDYVSHYYPDPSLVESDEELQAWWTEIRTVGHGDKQDETWWPVLNSPKD 727
LD+ K+ DYV +Y ++ +E++AW TE V + + +T L
Sbjct: 6 LDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKAWMTETLLVQNANPDCKTILKALGPGAT 65
Query: 728 LIDTITSIVWVASGLHAA 745
L + +T+ V H A
Sbjct: 66 LEEMMTACQGVGGPGHKA 83
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 30.8 bits (68), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Query: 154 HALEMYLKDIVLDG--LPSGLVTITCESWVQPNTSKDPRIFFTNKSYLPSKTPN 205
H L + D+ ++G LPSG + +W+ P ++DP F ++LP + PN
Sbjct: 303 HVLRVTTADVTINGRDLPSGTPVV---AWL-PAANRDPAEFDDPDTFLPGRKPN 352
>pdb|1NXC|A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals
The Molecular Basis For Substrate Specificity Among
Class I Enzymes (Family 47 Glycosidases)
Length = 478
Score = 30.4 bits (67), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 88/222 (39%), Gaps = 29/222 (13%)
Query: 443 IKGCTTV-----------KEALNQKKLFILDYHDLFLPYVEQVRELGDRTLYGSRTVFYL 491
IKG T V K + K +I Y D + V E+ R + G + +YL
Sbjct: 61 IKGATIVDALDTLFIMGMKTEFQEAKSWIKKYLDFNVNAEVSVFEVNIRFVGGLLSAYYL 120
Query: 492 NPDGTLRPLAIELTRPPM------DGKPQWKQAFTPSSDSTKSWLWKLAKAHVLAHDSGY 545
+ + R A+EL + G P W S ++W W + +LA
Sbjct: 121 SGEEIFRKKAVELGVKLLPAFHTPSGIP-W-ALLNMKSGIGRNWPWASGGSSILAEFGTL 178
Query: 546 HQLISHWLRTHCSVEPYAIAAHRQLSAMHPINRLLKPHFRYTMEINSLA---RQSLINAG 602
H H +H S +P + A + + +N+L KP Y +N + Q ++ G
Sbjct: 179 HLEFMH--LSHLSGDP--VFAEKVMKIRTVLNKLDKPEGLYPNYLNPSSGQWGQHHVSVG 234
Query: 603 GVIES--TFLPGKYSMLLSSIIYDKQWRFDH-QALPQDLISR 641
G+ +S +L + M + + K+ FD QA+ LI +
Sbjct: 235 GLGDSFYEYLLKAWLMSDKTDLEAKKMYFDAVQAIETHLIRK 276
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.136 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,908,808
Number of Sequences: 62578
Number of extensions: 1308598
Number of successful extensions: 3116
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2913
Number of HSP's gapped (non-prelim): 34
length of query: 894
length of database: 14,973,337
effective HSP length: 108
effective length of query: 786
effective length of database: 8,214,913
effective search space: 6456921618
effective search space used: 6456921618
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)